BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780223|ref|YP_003064636.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] (360 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780223|ref|YP_003064636.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] gi|254039900|gb|ACT56696.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] Length = 360 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/360 (100%), Positives = 360/360 (100%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST Sbjct: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS Sbjct: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD Sbjct: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS Sbjct: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL Sbjct: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF Sbjct: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 >gi|315122337|ref|YP_004062826.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495739|gb|ADR52338.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 361 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 261/356 (73%), Positives = 296/356 (83%), Gaps = 2/356 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRE +LNPQ IMRW I+FI+L +YFLKGFFAPVL+ALIIGF SWPIYS FISK+E+S T Sbjct: 1 MREIILNPQRIMRWTIIFIVLACIYFLKGFFAPVLTALIIGFASWPIYSLFISKEEKSFT 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWA 119 A IAT++V+ LFI+PLLF YY LE+K L S V L N+ GIP P WLS IPGG +WA Sbjct: 61 LEATIATLTVILLFIIPLLFFSYYTTLEIKNLASYVALVNEKGIPKPSWLSHIPGGGVWA 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 LWTK+LS PQSL L+E L TNG F +F S F DY LSIIFM+IALFFFYR Sbjct: 121 G-LWTKYLSPPQSLMTLTENILTTNGTQFTLKFVSYFSNCIFDYLLSIIFMLIALFFFYR 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG S+S QLDSLG +L P YW+KISRI+P+VIRSTF+GMT+IAIGEGLVLGSAYW+AGVP Sbjct: 180 DGLSMSLQLDSLGGYLLPVYWEKISRIIPRVIRSTFVGMTVIAIGEGLVLGSAYWIAGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S+ ALGVITAIMAMIPGGAP+SFT VSIYL+IKG+I NA LF WGAIELFIVDKTLRPF Sbjct: 240 SYTALGVITAIMAMIPGGAPVSFTVVSIYLVIKGSITNAILLFSWGAIELFIVDKTLRPF 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LVGGPI+LPFLPTFFGLVGGVRTMGLLGLFIGPV+MAL+ VIWKESI+AI+EN K Sbjct: 300 LVGGPIRLPFLPTFFGLVGGVRTMGLLGLFIGPVIMALMTVIWKESILAIRENNLK 355 >gi|227820705|ref|YP_002824675.1| predicted transmembrane protein [Sinorhizobium fredii NGR234] gi|227339704|gb|ACP23922.1| predicted transmembrane protein [Sinorhizobium fredii NGR234] Length = 391 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 182/358 (50%), Positives = 236/358 (65%), Gaps = 2/358 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RWM++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVLPISAARWMLVLILLAGVYFFHGFVVPVLAAVVIGFASWPIYRRLLQALNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA +SV+ +VP+ Y + E+++ + V N +G PVP WL+ IP G W Sbjct: 85 AATIAIISVIAFIVVPISIAAAYAIDEVRDWLVWAVETNVNGAPVPAWLTTIPVAGAWLG 144 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + W K++ HP +L L + +N I I R G L+++FM+I LFF YRD Sbjct: 145 QQWVKYVGHPGALGELVQLVSGSN-IGNIYRGVLVIGASAFQSFLTLLFMLITLFFVYRD 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 204 GHSFSKQLDRLGEQIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG+IT +MA+IPGGAP+ FT VSIYL+ G+ F+ LF WG ELFIVDKTLRP L Sbjct: 264 PVTLGIITGLMALIPGGAPLCFTLVSIYLVASGSPFHGVALFAWGTTELFIVDKTLRPRL 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 VGGPIKLPFLPTFFGLVGGV+TMG LGLF+GPVLMAL+ IW+E + + E ++ Sbjct: 324 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWMHEVANQPEPTAN 381 >gi|307306991|ref|ZP_07586730.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307318057|ref|ZP_07597494.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306896459|gb|EFN27208.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306901931|gb|EFN32530.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 391 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/354 (50%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVVPISAARWLLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA +SV+ +VP+ Y + E+++ + V N +G P P WL+ IP G W Sbjct: 85 AATIAIISVVAFIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLG 144 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ HP +L L + +N I I R G L+++FM+I LFF YRD Sbjct: 145 EQWVKYVGHPGALGELVQLVSGSN-IGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRD 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 204 GQSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG++T IMA+IPGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP L Sbjct: 264 PVTLGILTGIMALIPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRL 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 VGGPIKLPFLPTFFGL+GGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 324 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPE 377 >gi|195970204|ref|NP_384592.2| ABC transporter permease [Sinorhizobium meliloti 1021] gi|187904139|emb|CAC41923.2| Probable permease [Sinorhizobium meliloti 1021] Length = 436 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 178/354 (50%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 70 RSALVVPISAARWLLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTL 129 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA +SV+ +VP+ Y + E+++ + V N +G P P WL+ IP G W Sbjct: 130 AATIAIISVVAFIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLG 189 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ HP +L L + +N I I R G L+++FM+I LFF YRD Sbjct: 190 EQWVKYVGHPGALGELVQLVSGSN-IGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRD 248 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 249 GQSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 308 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG++T IMA+IPGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP L Sbjct: 309 PVTLGILTGIMALIPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRL 368 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 VGGPIKLPFLPTFFGL+GGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 369 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPE 422 >gi|260466876|ref|ZP_05813060.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259029378|gb|EEW30670.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 413 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 173/360 (48%), Positives = 231/360 (64%), Gaps = 2/360 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y ++ + T Sbjct: 31 LRSAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYRRLLASVGGNRT 90 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A A + ++ ++P+ Y + E++E V + N+HG P W++ +P G W Sbjct: 91 IAATFAILFILAFLVIPIALAGTYAINEVREWVGWAIETNRHGATTPHWIATLPVIGEWL 150 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E WT + HP + L + N I I R G L+++FM+IALFF YR Sbjct: 151 NEQWTDNFGHPGGIGELIQLISGAN-IGSIYRGVLAAGGSAFGLLLTLLFMMIALFFAYR 209 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVP Sbjct: 210 DGEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVP 269 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP Sbjct: 270 SPVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPK 329 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ E + + Sbjct: 330 LVGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVELADETAADS 389 >gi|13476905|ref|NP_108474.1| hypothetical protein mlr8361 [Mesorhizobium loti MAFF303099] gi|14027666|dbj|BAB53935.1| mlr8361 [Mesorhizobium loti MAFF303099] Length = 411 Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 174/355 (49%), Positives = 231/355 (65%), Gaps = 2/355 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y ++ + T Sbjct: 29 LRSAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYQRLLAGVGGNRT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A +A + ++ ++P+ Y + E++E V + N+HG P W++ +P G W Sbjct: 89 IAATLAILFILAFLVIPIALAGTYAINEVREWVGWAIETNRHGAVTPHWIATMPVVGDWL 148 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E WT + HP + L + N I I R A G L+++FM+IALFF YR Sbjct: 149 NEQWTTNFGHPGGIGELIQLISGAN-IGSIYRGALAAGGSAFGLLLTLLFMMIALFFAYR 207 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVP Sbjct: 208 DGEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVP 267 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP Sbjct: 268 SPVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPK 327 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LVGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ E Sbjct: 328 LVGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVELVDE 382 >gi|150395339|ref|YP_001325806.1| hypothetical protein Smed_0111 [Sinorhizobium medicae WSM419] gi|150026854|gb|ABR58971.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 391 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 176/359 (49%), Positives = 230/359 (64%), Gaps = 2/359 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ ++L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAAVVIGFASWPIYWRMLQALNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + V+ +VP+ Y + E++ + V N +G P P WL+ IP G W Sbjct: 85 AATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAVETNANGAPAPAWLATIPAVGAWLG 144 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ HP +L L + +N I I R G L+++FM+I LFF YRD Sbjct: 145 EQWVKNVGHPGALGELVQLVSGSN-IGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRD 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 204 GHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG+IT +MA++PGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP L Sbjct: 264 PVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIHGIALFTWGTTELFIVDKTLRPRL 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 VGGPIKLPFLPTFFGLVGGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 324 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPADDK 382 >gi|319784191|ref|YP_004143667.1| hypothetical protein Mesci_4507 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170079|gb|ADV13617.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 401 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 172/360 (47%), Positives = 231/360 (64%), Gaps = 2/360 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y + + T Sbjct: 22 LRAAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYRRLLVAVGGNRT 81 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A A + ++ ++P+ Y + E++E V+ + N+HG P W++ +P G W Sbjct: 82 IAATFAILFILAFLVIPIALAGTYAINEVREWVAWAIETNRHGAVTPHWIATMPVVGEWL 141 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E WT + HP + L + N I I R G L+++FM+IALFF YR Sbjct: 142 NEQWTTNFGHPGGIGELIQLVSGAN-IGSIYRGVLAAGGSAFGLLLTLLFMMIALFFAYR 200 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVP Sbjct: 201 DGEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVP 260 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP Sbjct: 261 SPVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPK 320 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ ++ + Sbjct: 321 LVGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVEMAEDVVPDG 380 >gi|222149993|ref|YP_002550950.1| permease [Agrobacterium vitis S4] gi|221736975|gb|ACM37938.1| permease [Agrobacterium vitis S4] Length = 349 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 173/350 (49%), Positives = 232/350 (66%), Gaps = 2/350 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ P RW+++ +++ S YF GF P+L+A++IGF SWPIY +S + T A Sbjct: 1 MVAPTSAARWLLLAVLMASAYFFYGFIVPLLAAMVIGFASWPIYRRILSLARGNRTIGAT 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELW 123 IA + V+ +VP+ Y + E+K + AN+ G PVP+WL +P G W SE W Sbjct: 61 IAIILVVSFIVVPISLAGIYAVDEVKSWGVWALRANEVGAPVPQWLIQVPLAGAWLSEHW 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +++ HP +L L + N I I R G L+++FM+IALFF YRDG Sbjct: 121 DQYVGHPGALGELVQLISGAN-IGTIYRGLLVVGSSAFHSFLTLLFMLIALFFVYRDGER 179 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I Q+D +GE + P W+++SR+VP I ST GMTIIA+GEG+VLG AYW+AGVPS V Sbjct: 180 IVAQVDIVGERILPGRWERVSRLVPLTISSTVTGMTIIAVGEGIVLGLAYWIAGVPSPVT 239 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG+IT MA+IPGGAP+SFT VSIYL+ G+ L WG +ELFIVDKTLRP LVGG Sbjct: 240 LGIITGFMALIPGGAPLSFTLVSIYLVASGSTIAGVGLLAWGTVELFIVDKTLRPRLVGG 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 PIKLPFLPTFFGL+GGV+TMG+LGLF+GPVLMA++ IW+E ++ K+ + Sbjct: 300 PIKLPFLPTFFGLIGGVKTMGMLGLFVGPVLMAILVAIWREWLLEAKQPE 349 >gi|325293121|ref|YP_004278985.1| permease [Agrobacterium sp. H13-3] gi|325060974|gb|ADY64665.1| permease [Agrobacterium sp. H13-3] Length = 412 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ + L +YF GF PVL+AL+IGF SWP+Y+ + + ++T Sbjct: 23 RIALIPPISAARWLLVLVALAGIYFFHGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTL 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ +VP+ Y E++E V N+ G PVP W++ +PG G W Sbjct: 83 GASIAIILILTFLVVPIFIAASYTASEIREWFGWAVHVNKVGAPVPDWIAALPGVGSWLG 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ P ++ + + N I I R G L+++FM+IALFF YR+ Sbjct: 143 EQWVKYIGTPGAIGEVIQLVSGAN-IGNIYRAILAAGNGAFHLVLTLLFMLIALFFVYRN 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S Q+D +GE + P W++ISR+VP I ST GMT+IAIGEG++LG AYW+AGVPS Sbjct: 202 GAGFSHQVDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYL+ G+ LF+WG++ELFIVDKT+RP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLVASGSPAYGLGLFIWGSVELFIVDKTIRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWREWVREVE 371 >gi|86357805|ref|YP_469697.1| putative permease protein [Rhizobium etli CFN 42] gi|86281907|gb|ABC90970.1| putative permease protein [Rhizobium etli CFN 42] Length = 398 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 176/347 (50%), Positives = 236/347 (68%), Gaps = 4/347 (1%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +S+ ++T A IA V ++ Sbjct: 32 RWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLSRVGGNTTIAATIAIVMIVT 91 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ Y E++ V+ + AN+ G P W+ +P G + ++WTK++ P Sbjct: 92 FLVIPIGLAVTYTTGEVRNWVTWAIHANRTGAATPDWIVALPWAGAYLDDVWTKYIGSPG 151 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L L + N I I R G L+++FM+IALFF YRDGFS S+Q+D L Sbjct: 152 ALGELIQAVSGAN-IGNIYRALLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDML 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS V LGV+T +M Sbjct: 211 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGVAYWIAGVPSPVTLGVLTGVM 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IPGGAP+SFT VS+YLL G+ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 271 ALIPGGAPLSFTLVSVYLLASGSHAAGIALFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK--ENKEKI 356 TFFGL+GGV+TMG LGLFIGPVLMALI IW+E I + E+ EK+ Sbjct: 331 TFFGLIGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAESGEKL 377 >gi|159184894|ref|NP_354723.2| permease [Agrobacterium tumefaciens str. C58] gi|159140174|gb|AAK87508.2| permease [Agrobacterium tumefaciens str. C58] Length = 412 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 236/350 (67%), Gaps = 2/350 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ ++L +YF GF PVL+AL+IGF SWP+Y+ + + ++T Sbjct: 23 RIALIPPISAARWLLLLVVLAGIYFFNGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTL 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ +VP+ Y E++E V N+ G PVP W++ +PG G W Sbjct: 83 GATIAIILIIAFLVVPIFIAASYTATEIREWFGWAVHVNKAGAPVPDWIAALPGIGPWLG 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ P ++ + + N I I R G L+++FM+IALFF YR+ Sbjct: 143 EQWVKYIGTPGAIGEVIQLVSGAN-IGNIYRAILAAGNGAFHLVLTLLFMLIALFFVYRN 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q+D +GE + P W++ISR+VP I ST GMT+IAIGEG++LG AYW+AGVPS Sbjct: 202 GAGFTRQIDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYL+ G+ + LF+WG++ELFIVDKT+RP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLVASGSPAHGLALFVWGSVELFIVDKTIRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWREWVREVE 371 >gi|209549432|ref|YP_002281349.1| hypothetical protein Rleg2_1838 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535188|gb|ACI55123.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 398 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 177/344 (51%), Positives = 235/344 (68%), Gaps = 3/344 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T A IA + ++ Sbjct: 34 RWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTIAATIAIIMIIT 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ Y E++ V+ + AN+ G P P W+ +P G + E+WTK++ P Sbjct: 94 FLVIPIGLAITYTTGEVRTWVAWAIHANRAGAPTPAWIVALPWAGAYLDEVWTKYIGSPG 153 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + N I I R G L+++FM+IALFF YRDGFS S+Q+D L Sbjct: 154 ALGEVIQAVSGAN-IGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDML 212 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS V LGV+T +M Sbjct: 213 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVM 272 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 273 ALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 332 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + N EK Sbjct: 333 TFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR-NAEK 375 >gi|116252266|ref|YP_768104.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256914|emb|CAK08008.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 405 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 176/348 (50%), Positives = 236/348 (67%), Gaps = 3/348 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T A IA + ++ Sbjct: 34 RWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTIAATIAIILIIT 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ Y E++ V+ + AN+ G P P W+ +P G + E+WTK++ P Sbjct: 94 FLVIPIGLAVTYTTGEVRTWVAWAIHANRAGAPTPDWIVALPWAGAYLDEVWTKYIGSPG 153 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + N I I R G L+++FM+IALFF YRDGFS S+Q+D L Sbjct: 154 ALGEVIQAVSGAN-IGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDML 212 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS V LGV+T +M Sbjct: 213 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVM 272 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 273 ALIPGGAPLSFTLVSIYLLASGSHVAGISLFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 332 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 TFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + N +K + Sbjct: 333 TFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR-NADKSETG 379 >gi|190891868|ref|YP_001978410.1| putative permease protein [Rhizobium etli CIAT 652] gi|190697147|gb|ACE91232.1| putative permease protein [Rhizobium etli CIAT 652] Length = 398 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 178/346 (51%), Positives = 236/346 (68%), Gaps = 4/346 (1%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T A IA + ++ Sbjct: 32 RWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTIAATIAIIMIVT 91 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ F Y E++ ++ + AN+ G P W++ +P G + ELWTK++ P Sbjct: 92 FLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLDELWTKYIGSPG 151 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L L + + I I R G L+++FM+IALFF YRDGFS S+QLD L Sbjct: 152 ALGELIQAVSGAH-IGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQLDML 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS V LGV+T +M Sbjct: 211 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVM 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 271 ALIPGGAPLSFTLVSIYLLASGSHVAGVGLFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK--ENKEK 355 TFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + E E+ Sbjct: 331 TFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAETGER 376 >gi|119896356|ref|YP_931569.1| permease [Azoarcus sp. BH72] gi|119668769|emb|CAL92682.1| probable permease [Azoarcus sp. BH72] Length = 367 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 172/349 (49%), Positives = 231/349 (66%), Gaps = 12/349 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW++ ++L +YFL GF PVL+ALIIGF SWP+Y + + S A +A ++V Sbjct: 10 VARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAVAASLALMTV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLS 128 + + +VPL Y M E L+ ++ AN++G+ PRW+ +P GG A+ LW ++L Sbjct: 70 ILVLVVPLSLAGSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLAA-LWQEYLG 128 Query: 129 HPQSL----KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 PQ+L +ILS L I R L L+++FM+I LFF Y+DG I Sbjct: 129 APQALGEWVQILSGQHLGN-----IYRILLAATGDLLHAVLTLLFMLITLFFIYKDGDRI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + QLD +GE + PA W++ SR+VP + +T GM +IAIGEG+VLG AYW+AGVPS V L Sbjct: 184 AAQLDRVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSPVLL 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV TA MA+IPGGAP++FT VS+YL+ G+ LF WG ELFIVDKTLRP LVGGP Sbjct: 244 GVATAFMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLVGGP 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +KLPFLPTFFGLVGGV+TMGL+GLF+GPVLMAL+ IW+E + +E Sbjct: 304 VKLPFLPTFFGLVGGVKTMGLVGLFVGPVLMALLVAIWREWLHHTEEEA 352 >gi|241204758|ref|YP_002975854.1| hypothetical protein Rleg_2037 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858648|gb|ACS56315.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 405 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 175/348 (50%), Positives = 237/348 (68%), Gaps = 3/348 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T A IA + ++ Sbjct: 34 RWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTIAATIAIIMIIT 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ Y E++ V+ + AN+ G P P W+ +P G + +E+WT+++ P Sbjct: 94 FLVIPIGLAVTYTTGEVRTWVTWAIHANRVGAPTPDWIVALPWAGAYLNEVWTRYIGSPG 153 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + N I I R G L+++FM+IALFF YRDGFS S+Q+D L Sbjct: 154 ALGEVIQAVSGAN-IGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDML 212 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS V LGV+T +M Sbjct: 213 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVM 272 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 273 ALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 332 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 TFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + N +K + Sbjct: 333 TFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR-NADKSETG 379 >gi|163858826|ref|YP_001633124.1| hypothetical protein Bpet4506 [Bordetella petrii DSM 12804] gi|163262554|emb|CAP44857.1| conserved hypothetical protein [Bordetella petrii] Length = 389 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 164/360 (45%), Positives = 229/360 (63%), Gaps = 2/360 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +L I RW+++ ++L YFL GF P L+ALIIG +WP++ + K +T Sbjct: 21 MHQPVLPAYLIARWLLLLVLLAGAYFLSGFLVPALAALIIGLATWPLFQRIVQKCGGRAT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A +A + V+ + IVPL Y + E + + AN+HG+ VP W+S +P G Sbjct: 81 LAATLALIGVILVIIVPLALALSYAVQEASNFFAWALAANRHGMAVPDWISSLPAVGPRL 140 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W +L P +L L E + + S G F L+++FM+I LFF Y+ Sbjct: 141 AVYWQTYLGEPHALGALVELVSGEHLGNIYRMVLSATGNAF-QLLLNVVFMLITLFFVYK 199 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + QLD LGE + P W++ SR+VP + ST GM++IA+GEG+VLG AYWLAGVP Sbjct: 200 DGDRMIAQLDVLGERILPTRWQRFSRVVPATVGSTVTGMSLIAVGEGVVLGVAYWLAGVP 259 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGV+T MA+IPGGAP+SFT VS+YL+ G++ L WG IELFIVDKTLRP Sbjct: 260 SPVLLGVVTGFMALIPGGAPLSFTLVSLYLIGSGHLVAGLALLAWGTIELFIVDKTLRPR 319 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVGGP+KLPFLPTFFGL+GGV+TMG++GLF+GPVLMAL+ +W+E + ++ ++ N Sbjct: 320 LVGGPVKLPFLPTFFGLIGGVKTMGIVGLFVGPVLMALLVAVWREWVRNVERERDTARLN 379 >gi|218672333|ref|ZP_03522002.1| putative permease protein [Rhizobium etli GR56] Length = 413 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 175/340 (51%), Positives = 233/340 (68%), Gaps = 2/340 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T A IA + ++ Sbjct: 32 RWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTIAATIAIIMIVT 91 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ F Y E++ ++ + AN+ G P W++ +P G + ELWTK++ P Sbjct: 92 FLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLDELWTKYIGSPG 151 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L L + + I I R G L+++FM+IALFF YRDGFS S+Q+D L Sbjct: 152 ALGELIQAVSGAH-IGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDML 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS V LGV+T +M Sbjct: 211 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVM 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 271 ALIPGGAPLSFTLVSIYLLASGSHVAGVGLFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 TFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 331 TFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARN 370 >gi|222086043|ref|YP_002544575.1| permease protein [Agrobacterium radiobacter K84] gi|221723491|gb|ACM26647.1| permease protein [Agrobacterium radiobacter K84] Length = 392 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 164/348 (47%), Positives = 230/348 (66%), Gaps = 2/348 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ I +YF GF PVL+A +IGF +WP+YS + + ++T A IA ++ Sbjct: 33 RWLLILIAAAGIYFFYGFLIPVLAAAVIGFATWPLYSDLLRRTGGNTTLAAAIAIAFIVT 92 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQ 131 ++P++ Y E++E V N+ G P P+W+ +P G W + WT+++ P Sbjct: 93 FLVLPIVLSAIYMAGEVREWFGWAVHVNRDGAPPPQWILALPMVGAWLGDQWTQYIGSPG 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S+ L++ + I I R G L+++FM+IALFF YRDG +Q+D L Sbjct: 153 SIGELAQ-LISGAHIGNIYRAVLAAGGGAFHVILTLLFMLIALFFIYRDGSMFVRQVDLL 211 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AG PS + LGV+T +M Sbjct: 212 GERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGVAYWIAGAPSAITLGVLTGVM 271 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A++PGGAP+S + VSIYL+ G+++ LF+WG +ELFIVDKTLRP LVGGPIKLPFLP Sbjct: 272 ALVPGGAPLSMSLVSIYLIASGSLWAGIALFVWGTVELFIVDKTLRPKLVGGPIKLPFLP 331 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 TFFGLVGGV+TMG LGLFIGPVLMA+I IW+E I + +E+ + Sbjct: 332 TFFGLVGGVKTMGFLGLFIGPVLMAIIVAIWREWIREAELTEEQHAQE 379 >gi|293602078|ref|ZP_06684532.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292819533|gb|EFF78560.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 374 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 161/350 (46%), Positives = 228/350 (65%), Gaps = 2/350 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ ++L +YFL GF P L+ALIIG SWP+Y + + + A +A + V Sbjct: 10 IARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVVRCGGRTAVAASLALLMV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + + IVP+ Y + E + + AN+HG+ VP W++ +P G + W ++ Sbjct: 70 IVVLIVPMSLALSYAIKEASTFFAWAIAANRHGVAVPNWITSMPVVGERLGQYWESYIGE 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P +L L E + + + G +F L+++FM+I LFF Y+DG + QLD Sbjct: 130 PHALGALVEAVSGEHLGNIYRMVLAATGNVF-QLLLTVLFMLITLFFVYKDGIRMVAQLD 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 LGE + PA W++ SR+VP I ST GM +IA+GEGLVLG AYW+AGVPS V LGV+T Sbjct: 189 VLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGLVLGVAYWVAGVPSPVLLGVVTG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LVGGP+KLPF Sbjct: 249 FMALIPGGAPLSFTLVSLYLVGSGHVVAGIALMVWGSVELFIVDKTLRPRLVGGPVKLPF 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LPTFFGLVGGV+TMGL+GLF+GPVLMAL+ +W+E + + ++ S+ Sbjct: 309 LPTFFGLVGGVKTMGLVGLFVGPVLMALLVAVWREWVHHEVQERDAERSH 358 >gi|217974961|ref|YP_002359712.1| hypothetical protein Sbal223_3812 [Shewanella baltica OS223] gi|217500096|gb|ACK48289.1| protein of unknown function UPF0118 [Shewanella baltica OS223] Length = 356 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 7/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA + Sbjct: 10 IGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAATIALCCI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + W + + Sbjct: 70 VLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQWQQFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGQQVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E ++E E I S+ Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWRE---WLREEPEIIQSD 355 >gi|117918932|ref|YP_868124.1| hypothetical protein Shewana3_0477 [Shewanella sp. ANA-3] gi|117611264|gb|ABK46718.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 368 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 168/342 (49%), Positives = 235/342 (68%), Gaps = 4/342 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIIVGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 124 TKHLSHPQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 124 QQFIGEPHELGKIVSA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 SVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWRE 343 >gi|160877112|ref|YP_001556428.1| hypothetical protein Sbal195_4008 [Shewanella baltica OS195] gi|160862634|gb|ABX51168.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|315269316|gb|ADT96169.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 360 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 7/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA + Sbjct: 10 IGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAATIALCCI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + W + + Sbjct: 70 VLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQWQQFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGQQVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E ++E E I S+ Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWRE---WLREEPEIIQSD 355 >gi|114049038|ref|YP_739588.1| hypothetical protein Shewmr7_3551 [Shewanella sp. MR-7] gi|113890480|gb|ABI44531.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 364 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 168/342 (49%), Positives = 235/342 (68%), Gaps = 4/342 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIIVGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 124 TKHLSHPQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 124 QQFIGEPHELGKIVSA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 SVAKQLDIVGERILPARWHRFSRVVPTTVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWRE 343 >gi|126172699|ref|YP_001048848.1| hypothetical protein Sbal_0447 [Shewanella baltica OS155] gi|125995904|gb|ABN59979.1| protein of unknown function UPF0118 [Shewanella baltica OS155] Length = 360 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 7/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA + Sbjct: 10 IGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAATIALCCI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + W + + Sbjct: 70 VLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQWQQFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEQVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E ++E E I S+ Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWRE---WLREEPEIIQSD 355 >gi|304410810|ref|ZP_07392427.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307305019|ref|ZP_07584769.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304350707|gb|EFM15108.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306912421|gb|EFN42845.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 360 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 7/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA + Sbjct: 10 IGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAATIALCCI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + W + + Sbjct: 70 VLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWIGEWLTLQWQQFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEQVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E ++E E I S+ Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWRE---WLREEPEIIQSD 355 >gi|153002392|ref|YP_001368073.1| hypothetical protein Shew185_3886 [Shewanella baltica OS185] gi|151367010|gb|ABS10010.1| protein of unknown function UPF0118 [Shewanella baltica OS185] Length = 359 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 170/352 (48%), Positives = 236/352 (67%), Gaps = 11/352 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA + Sbjct: 10 IGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAATIALCCI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + W + + Sbjct: 70 VLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQWQQFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEQVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-------ESIMAIKENK 353 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+ E+IM +E+K Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPETIMGKQEDK 359 >gi|113968823|ref|YP_732616.1| hypothetical protein Shewmr4_0479 [Shewanella sp. MR-4] gi|113883507|gb|ABI37559.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 372 Score = 315 bits (807), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 168/342 (49%), Positives = 234/342 (68%), Gaps = 4/342 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y + K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIILGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 124 TKHLSHPQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 124 QQFIGEPHELGKIVSA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 SVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWRE 343 >gi|187476842|ref|YP_784866.1| membrane protein [Bordetella avium 197N] gi|115421428|emb|CAJ47933.1| putative membrane protein [Bordetella avium 197N] Length = 369 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 168/346 (48%), Positives = 230/346 (66%), Gaps = 4/346 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ ++ LYFL GF P L+ALIIG +WP+Y + + + A +A V Sbjct: 11 IARWLLLLVVAAGLYFLSGFLVPALAALIIGLATWPLYERVVRFCKGRNILAATLALCIV 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + + +VPL Y E + + AN+HG+ VP W+S +PG G S+ WT +L Sbjct: 71 VLVVVVPLSMALTYAFKEASNFFAWALAANKHGVEVPFWISSLPGVGERLSQYWTTYLGE 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFA-SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P +L + E + + I R A S G +F + L+++FM+I LFF Y+DG S+ QL Sbjct: 131 PHALGAMVE-LVSGEHLGNIYRMALSATGNVF-QWLLTLLFMLITLFFVYKDGKSMVAQL 188 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D LGE + PA WK+ SR+VP + ST GM +IA+GEG+VLG AYW+AGVPS V LGVIT Sbjct: 189 DILGERVLPARWKRFSRVVPATVSSTVTGMCLIALGEGVVLGLAYWIAGVPSPVLLGVIT 248 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 MA+IPGGAP+SFT VS+YL+ ++ LF+WG +ELFIVDKTLRP LVGGP+KLP Sbjct: 249 GFMALIPGGAPLSFTLVSLYLVGSNHLVAGVGLFVWGTVELFIVDKTLRPRLVGGPVKLP 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FLPTFFGLVGGV+TMG++GLF+GPVLMAL+ IW+E + + + + Sbjct: 309 FLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAIWREWVRNTERDCD 354 >gi|119386380|ref|YP_917435.1| hypothetical protein Pden_3672 [Paracoccus denitrificans PD1222] gi|119376975|gb|ABL71739.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 396 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 157/360 (43%), Positives = 222/360 (61%), Gaps = 2/360 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +L RW+++ I+ S+YF GF PVL+A++I SWP+ + T+ Sbjct: 34 RPPLLTNISAARWLLLAIVAASIYFFHGFLVPVLAAMVIALASWPLRERAAHQLNLGRTW 93 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A + ++C ++P+ Y E+++ ++ +L N G P W+ D+P G W Sbjct: 94 AAAALVLVLVCFLLIPIAMALIYAFRELRDWINWAILVNSSGAATPGWMVDLPQIGDWLD 153 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W ++ P + + + +N I I R A G + L+++FM+I LF YRD Sbjct: 154 ENWQTYIGRPGGISEIVQLVSGSN-IGAIYRGAVTAGTLAFHLALTLLFMLITLFVLYRD 212 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I Q+D +G + P W ++SR+VP I ST GMT+IAIGEG++LG AYWLAGVPS Sbjct: 213 GDKIVAQIDQVGRRILPDRWSRLSRVVPATISSTVTGMTLIAIGEGVILGIAYWLAGVPS 272 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V GVIT MA+IPGGAP+SFT VSIYL+ G+ LF+WG ELF+VDKT+RP L Sbjct: 273 PVTFGVITGFMALIPGGAPLSFTLVSIYLVASGSPVAGAALFVWGTCELFVVDKTIRPVL 332 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 VGGP+KLPFLPTFFGL+GGV+TMG++GLF+GPVLMAL+ IW+E + E +++ S Sbjct: 333 VGGPVKLPFLPTFFGLIGGVKTMGIVGLFVGPVLMALLVSIWREWQRELSEEEQRQDSKL 392 >gi|24372067|ref|NP_716109.1| hypothetical protein SO_0472 [Shewanella oneidensis MR-1] gi|24345945|gb|AAN53554.1|AE015495_8 membrane protein, putative [Shewanella oneidensis MR-1] Length = 373 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 166/341 (48%), Positives = 230/341 (67%), Gaps = 2/341 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALII F+SWP+Y + K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIICFSSWPLYKKLLVKCGGRSAVAAS 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIVLGLITPLIFVFSYALQEIRIWAEWLVYANQHGAPVPLWIKDLPWVGEWLTLQW 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + P L + N + I R+ + G L L+++FM+I LFF Y+DG S Sbjct: 124 QQFIGEPHELGQIVSAISGQN-LTGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGES 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++Q+D +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQVDVVGERILPARWYRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWRE 343 >gi|120597402|ref|YP_961976.1| hypothetical protein Sputw3181_0571 [Shewanella sp. W3-18-1] gi|146294457|ref|YP_001184881.1| hypothetical protein Sputcn32_3370 [Shewanella putrefaciens CN-32] gi|120557495|gb|ABM23422.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] gi|145566147|gb|ABP77082.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] Length = 360 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 168/351 (47%), Positives = 234/351 (66%), Gaps = 7/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA V + Sbjct: 10 IGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAATIALVLI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + ++PL F+F Y + E++ V +V NQHG VP W+ ++P G W + W + + Sbjct: 70 VLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQWHEFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEHVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E ++E E I + Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREW---LREEPETIPMD 355 >gi|33594470|ref|NP_882114.1| hypothetical protein BP3604 [Bordetella pertussis Tohama I] gi|33595146|ref|NP_882789.1| hypothetical protein BPP0437 [Bordetella parapertussis 12822] gi|33599428|ref|NP_886988.1| hypothetical protein BB0439 [Bordetella bronchiseptica RB50] gi|33564545|emb|CAE43862.1| putative membrane protein [Bordetella pertussis Tohama I] gi|33565223|emb|CAE36021.1| putative membrane protein [Bordetella parapertussis] gi|33567024|emb|CAE30937.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 367 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 162/346 (46%), Positives = 228/346 (65%), Gaps = 2/346 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ ++L +YFL GF P L+ALIIG +WP++ + +T A +A V+V Sbjct: 11 IARWLLLLVLLAGIYFLSGFLVPALAALIIGLATWPLFQRLVRAFGGRTTLAATLALVAV 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + + +VPL Y + E + + AN+HG+ VP W+ +P G +E W +L Sbjct: 71 IVILVVPLSLALSYAIKEAGNFFAWALAANKHGVDVPAWIMSLPMVGERLAEYWRTYLGE 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P +L L E + + S G F L+++FM+I LFF Y+DG + QLD Sbjct: 131 PHALGALVEIVSGEHLGNIYRMVLSATGNAF-QLLLTVLFMLITLFFVYKDGTRMVGQLD 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 LGE + PA W++ SR+VP + ST GM +IA+GEG+VLG AYW+AGVPS V LGVIT Sbjct: 190 ILGERVLPARWQRFSRVVPATVSSTVTGMCLIALGEGVVLGLAYWVAGVPSPVLLGVITG 249 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 MA++PGGAP+SFT VS+YL+ G++ LF+WG +ELFIVDKTLRP LVGGP+KLPF Sbjct: 250 FMALVPGGAPLSFTLVSLYLVGSGHLVAGIGLFVWGTVELFIVDKTLRPRLVGGPVKLPF 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LPTFFGLVGGV+TMG++GLF+GPVLMAL+ IW+E + ++ +++ Sbjct: 310 LPTFFGLVGGVKTMGIVGLFVGPVLMALLVAIWREWVRNVERERDQ 355 >gi|311109042|ref|YP_003981895.1| hypothetical protein AXYL_05884 [Achromobacter xylosoxidans A8] gi|310763731|gb|ADP19180.1| hypothetical protein AXYL_05884 [Achromobacter xylosoxidans A8] Length = 366 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/350 (45%), Positives = 228/350 (65%), Gaps = 2/350 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ ++L +YFL GF P L+ALIIG SWP+Y +++ + A +A + V Sbjct: 10 IARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVARCGGRTALAASLALLVV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + + IVP+ Y + E + + AN+HG+ VP W++ +P G + W ++ Sbjct: 70 IVVLIVPMSLALSYAIKEASTFFAWAIAANRHGVDVPNWITSMPVVGERLGQYWEAYIGQ 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P +L L E + + + G +F L+++FM+I LFF Y+DG + QLD Sbjct: 130 PHALGALVEAVSGEHLGNIYRMVLAATGNVF-QLLLTVLFMLITLFFVYKDGIRMVAQLD 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 LGE + PA W++ SR+VP I ST GM +IA+GEGLVLG AYW+AGVPS V LGV+T Sbjct: 189 VLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGLVLGIAYWVAGVPSPVLLGVVTG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LVGGP+KLPF Sbjct: 249 FMALIPGGAPLSFTLVSLYLVGSGHLVAGIALMVWGSVELFIVDKTLRPRLVGGPVKLPF 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LPTFFGLVGGV+TMG++GLF+GPVLMAL+ +W+E + + ++ N Sbjct: 309 LPTFFGLVGGVKTMGIVGLFVGPVLMALLVAVWREWVHHEVQERDAARIN 358 >gi|319427812|gb|ADV55886.1| protein of unknown function UPF0118 [Shewanella putrefaciens 200] Length = 360 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 168/351 (47%), Positives = 234/351 (66%), Gaps = 7/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A IA V + Sbjct: 10 IGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAATIALVLI 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + ++PL F+F Y + E++ V +V NQHG VP W+ ++P G W + W + + Sbjct: 70 VLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQWHEFIGE 129 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L KI+S + + I R+ + G L L+++FM+I LFF Y+DG +++QL Sbjct: 130 PHELGKIISA--ISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEHVAKQL 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA GV+T Sbjct: 188 DIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGPIKLP Sbjct: 248 AFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLP 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E ++E E I + Sbjct: 308 FLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREW---LREEPEVIQID 355 >gi|330428410|gb|AEC19744.1| membrane protein [Pusillimonas sp. T7-7] Length = 361 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 172/349 (49%), Positives = 228/349 (65%), Gaps = 5/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ +ILV LYFL GF PVL+ALII SWP+Y + + + A +A + V Sbjct: 10 IARWLLVLLILVGLYFLSGFLVPVLAALIISLASWPLYQRLLRRCHGRNALAASLALIIV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + + IVPL Y + E ++ + AN+HG+PVP W+ +P G +E WT +L Sbjct: 70 IIVLIVPLSLALSYAVQEASNFIAWALAANRHGMPVPAWILALPLVGARLAEYWTTYLGE 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P +L + E + + S G +F L +IFM+I LFF Y+DG I QLD Sbjct: 130 PHALGEMVEIVSGEHLGNIYRMLLSATGDVF-RLLLGVIFMLITLFFVYKDGAHILGQLD 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +G+ + P W++ SR+VP I ST GM +IA+GEG+VLG AYW+AGVPS V LGVIT Sbjct: 189 IVGDRILPGRWRRFSRVVPATINSTVTGMGLIALGEGVVLGLAYWIAGVPSPVLLGVITG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 MA+IPGGAP+SF+ VS+YL+ G LFLWG +ELFIVDKTLRP LVGGP+KLPF Sbjct: 249 FMALIPGGAPLSFSVVSLYLVGSGEPMAGLGLFLWGTVELFIVDKTLRPRLVGGPVKLPF 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LPTFFGL+GGV+TMGL+GLF+GPVLMAL+ IW+E I E+ KI+ Sbjct: 309 LPTFFGLIGGVQTMGLVGLFVGPVLMALLVAIWREW---IHEDDNKIAK 354 >gi|317405134|gb|EFV85477.1| hypothetical protein HMPREF0005_04798 [Achromobacter xylosoxidans C54] Length = 373 Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 163/351 (46%), Positives = 230/351 (65%), Gaps = 4/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ ++L +YFL GF P L+ALIIG SWP+Y +++ + A +A + V Sbjct: 10 IARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVARCGGRTALAASLALLVV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + + IVPL Y + E + + AN+HG+ VP W++ +P G SE W ++ Sbjct: 70 IVVLIVPLSLALSYAIKEASTFFAWAIAANRHGVDVPNWITSMPVVGDRLSEYWQAYIGQ 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P +L L E + + + G +F L+++FM+I LFF Y+DG + QLD Sbjct: 130 PHALGALVEAVSGEHLGNIYRMVLAATGNVF-QLLLTVLFMLITLFFVYKDGMRMVAQLD 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 LGE + PA W++ SR+VP I ST GM +IA+GEG+VLG AYW+AGVPS V LGV+T Sbjct: 189 VLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGVVLGIAYWVAGVPSPVLLGVVTG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LVGGP+KLPF Sbjct: 249 FMALIPGGAPLSFTLVSLYLVGSGHVVAGIALMVWGSVELFIVDKTLRPRLVGGPVKLPF 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 LPTFFGLVGGV+TMG++GLF+GPVLMAL+ +W+E + E E+ ++ Sbjct: 309 LPTFFGLVGGVKTMGIVGLFVGPVLMALLVAVWREWVH--HEEAERDTARL 357 >gi|77462103|ref|YP_351607.1| putative transmembrane transport protein [Rhodobacter sphaeroides 2.4.1] gi|126460992|ref|YP_001042106.1| hypothetical protein Rsph17029_0215 [Rhodobacter sphaeroides ATCC 17029] gi|77386521|gb|ABA77706.1| Putative transmembrane transport protein [Rhodobacter sphaeroides 2.4.1] gi|126102656|gb|ABN75334.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 406 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 154/357 (43%), Positives = 216/357 (60%), Gaps = 4/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ RW+++ I+ S+YF GF PVL+ALII F SWP+ S Sbjct: 27 VRRPLITDISAARWLLLLILAASVYFFHGFLVPVLAALIIAFASWPLMLKLERSLPISRG 86 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 + + ++ ++P++ Y E++ + + N G P P WL +P G W Sbjct: 87 IAGALLVMMIVGFLVIPVMMALLYAFRELQAWIGWAINTNSTGAPPPVWLEALPHVGPWV 146 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W ++ P ++ + + N I I R G + L+++FM+IALF FYR Sbjct: 147 GEKWRTYIGEPGAISEMVQLVSGAN-IGTISRGILTAGTLAFHLALTLLFMLIALFIFYR 205 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+P Sbjct: 206 DGERIAAQVDRVGTRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMP 265 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGVIT MA+IPGGAP S YL G+ + LFLWG +ELF+VDKT+RP Sbjct: 266 SPVTLGVITGFMALIPGGAPFCVIVASSYLAASGSPWAGLGLFLWGTVELFVVDKTIRPV 325 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE--SIMAIKENKE 354 LVGGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E + I E +E Sbjct: 326 LVGGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVAMWREWQREIDIAETEE 382 >gi|221641060|ref|YP_002527322.1| hypothetical protein RSKD131_2961 [Rhodobacter sphaeroides KD131] gi|221161841|gb|ACM02821.1| Hypothetical Protein RSKD131_2961 [Rhodobacter sphaeroides KD131] Length = 424 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 154/357 (43%), Positives = 216/357 (60%), Gaps = 4/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ RW+++ I+ S+YF GF PVL+ALII F SWP+ S Sbjct: 35 VRRPLITDISAARWLLLLILAASVYFFHGFLVPVLAALIIAFASWPLMLKLERSLPISRG 94 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 + + ++ ++P++ Y E++ + + N G P P WL +P G W Sbjct: 95 IAGALLVMMIVGFLVIPVMMALLYAFRELQAWIGWAINTNSTGAPPPVWLEALPHVGPWV 154 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W ++ P ++ + + N I I R G + L+++FM+IALF FYR Sbjct: 155 GEKWRTYIGEPGAISEMVQLVSGAN-IGTISRGILTAGTLAFHLALTLLFMLIALFIFYR 213 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+P Sbjct: 214 DGERIAAQVDRVGTRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMP 273 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGVIT MA+IPGGAP S YL G+ + LFLWG +ELF+VDKT+RP Sbjct: 274 SPVTLGVITGFMALIPGGAPFCVIVASSYLAASGSPWAGLGLFLWGTVELFVVDKTIRPV 333 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE--SIMAIKENKE 354 LVGGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E + I E +E Sbjct: 334 LVGGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVAMWREWQREIDIAETEE 390 >gi|146279074|ref|YP_001169233.1| hypothetical protein Rsph17025_3044 [Rhodobacter sphaeroides ATCC 17025] gi|145557315|gb|ABP71928.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 398 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 154/356 (43%), Positives = 216/356 (60%), Gaps = 4/356 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ RW+++ I+ S+YF GF PVL+A+II F SWP+ Sbjct: 20 RKPLITDISAARWLLLLILAASVYFFHGFLVPVLAAVIIAFASWPLLQRLERSLPIGRAG 79 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 + + ++ ++P++ Y E++ + + N G P P WL +P G W Sbjct: 80 AGALLLMMIVGFLVIPVMMALLYAFRELQSWIGWAINTNSLGAPPPVWLETLPHVGPWIG 139 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W ++ P ++ + + N I I R G + L+++FM+IALF FYRD Sbjct: 140 EKWRAYIGEPGAISEMVQLVSGAN-IGTISRGILTAGTLAFHLALTLLFMLIALFIFYRD 198 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+PS Sbjct: 199 GERIAAQVDRVGSRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMPS 258 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGVIT MA++PGGAP A S YL G+ + LFLWG IELFIVDKT+RP L Sbjct: 259 PVTLGVITGFMALVPGGAPFCVVAASSYLAASGSPWAGLGLFLWGTIELFIVDKTIRPVL 318 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE--SIMAIKENKE 354 VGGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E + I E +E Sbjct: 319 VGGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVSMWREWQREIDIAEAEE 374 >gi|310815151|ref|YP_003963115.1| hypothetical protein EIO_0655 [Ketogulonicigenium vulgare Y25] gi|308753886|gb|ADO41815.1| putative membrane protein [Ketogulonicigenium vulgare Y25] Length = 390 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 142/358 (39%), Positives = 223/358 (62%), Gaps = 4/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ Q +RW+++ ++ S+YF GF PVL+A++I F SWPI + +T+ Sbjct: 32 RKPVITDQAAVRWLLLVLLAASVYFFYGFIVPVLAAMVIAFASWPIRQRLVPHM--GTTW 89 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A++ ++++ ++P+L Y + E++ ++ N G P P W+ ++P G Sbjct: 90 AAIVMVLALVVCIVLPILMGVLYAIHEVRGWSMWLMEVNTTGAPTPEWMQELPFFGAQID 149 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + L P + L + +N ++ I R G L+++F+++ALF FY D Sbjct: 150 ERWAEFLGRPGGVSALIQLVTGSNIMN-IYRGVLSAGYYSFHLFLNLVFVLVALFVFYHD 208 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I Q+ +G L P W ++S + P + ST GMT+IAIGEG++LG AYW+AGVP+ Sbjct: 209 GDKIVAQIGRVGRRLLPERWDRLSSVAPMTVSSTVTGMTLIAIGEGIILGLAYWVAGVPA 268 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+IT +A+IPGGAP++FT +S+YL+ G+ LF+WG +ELFIVDKT+RP+L Sbjct: 269 PATFGLITGFLALIPGGAPLAFTTISLYLVASGSPIAGVGLFVWGTVELFIVDKTIRPWL 328 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 VGGP++LPFL TFFGL+GG++TMG++GLF+GPVLMAL+ IW+E I+ E+ Sbjct: 329 VGGPVRLPFLLTFFGLIGGIKTMGIVGLFVGPVLMALLMTIWREWQREIRAPYERAED 386 >gi|258542772|ref|YP_003188205.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633850|dbj|BAH99825.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636909|dbj|BAI02878.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639962|dbj|BAI05924.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256643018|dbj|BAI08973.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256646073|dbj|BAI12021.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256649126|dbj|BAI15067.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256652113|dbj|BAI18047.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655170|dbj|BAI21097.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 390 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 109/331 (32%), Positives = 174/331 (52%), Gaps = 8/331 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMC 72 + +FI+ V++Y ++GF + + +WP+Y+ +K S T L ++ T ++ Sbjct: 53 LALFIVGVAVYTIQGFLPALAWGSVFAIATWPLYTRACNKWPHAASGTLLPLLFTAAMAL 112 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQ 131 LF++PL + + E + + V A ++G+PVP + +P G A S+ W HLS P+ Sbjct: 113 LFVIPLTLVTLEAVGEAQSALEWVSHAREYGVPVPDAIHRLPFGSSAISKWWEAHLSDPR 172 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + L + G+ S+ +C F I+ LFF Y+DG S+ +Q + Sbjct: 173 DLSGMLGN-LDSKGVAVTRAVGSQVAHRATLFC----FSILTLFFLYKDGLSVIRQCRVV 227 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F + + R + I + G+ ++ IGEGL+LG Y A P GVITA+ Sbjct: 228 SCRAFGKRGESVGRQIVASIHGSVQGLVLVGIGEGLLLGVVYVFAHAPHPALFGVITAVA 287 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 AMIP A I+ VS+ +L++G+ A F GA+ +F D +RP L+GG KLPFL Sbjct: 288 AMIPFCAMIAVGLVSLLILVQGSSVAAITTFCIGAVIIFTADHFIRPALIGGSTKLPFLW 347 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G++GG T GL+GLFIGP MA + ++W Sbjct: 348 VLLGILGGAETWGLIGLFIGPAAMAALNLLW 378 >gi|329114629|ref|ZP_08243388.1| UPF0118 membrane protein [Acetobacter pomorum DM001] gi|326696109|gb|EGE47791.1| UPF0118 membrane protein [Acetobacter pomorum DM001] Length = 398 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 108/331 (32%), Positives = 174/331 (52%), Gaps = 8/331 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMC 72 + +FI+ V++Y ++GF + + +WP+Y+ +K S T L ++ T ++ Sbjct: 61 LALFIVGVAVYTIQGFLPALAWGSVFAIATWPLYTRACNKWPHAASGTLLPLLFTAAMAL 120 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQ 131 LF++PL + + E + + + A ++G+PVP + +P G A S+ W HLS P+ Sbjct: 121 LFVIPLTLVTLEAVGEAQSALEWLSHAREYGVPVPDTIHRLPFGSAAISKWWEAHLSDPR 180 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + L + G+ S+ +C F I+ LFF Y+DG S+ +Q + Sbjct: 181 DLSGMLGN-LDSKGVAVTRAVGSQVAHRATLFC----FSILTLFFLYKDGLSVIRQCRVV 235 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F + I R + I + G+ ++ IGEGL+LG Y A P GVITA+ Sbjct: 236 SCRAFGKRGESIGRQIVASIHGSVQGLVLVGIGEGLLLGIIYVFAHAPHPALFGVITAVA 295 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 AMIP A I+ VS+ +L++G+ A F GA+ +F D +RP L+GG KLPFL Sbjct: 296 AMIPFCAMIAVGLVSLLILVQGSSVAAITTFCIGAVIIFTADHFIRPALIGGSTKLPFLW 355 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G++GG T GL+GLF+GP MA + ++W Sbjct: 356 VLLGILGGAETWGLIGLFVGPAAMAALNLLW 386 >gi|53804374|ref|YP_113737.1| hypothetical protein MCA1275 [Methylococcus capsulatus str. Bath] gi|53758135|gb|AAU92426.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 354 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKE--ESSTFLAVIATVSVMCLFIVPLLFLF 82 + L GF P+ A+++ FT WP Y + +L + T+ +M L +VP F Sbjct: 26 WVLHGFIMPIAWAVVLAFTVWPWYEHVYQRAPCWMRGGWLPLAMTLLMMVLLMVPATFGV 85 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 E++ L ++ GI P WL +P G W E W++ +P+++K L Sbjct: 86 LVLGHEVQMLHRLLIKVQSSGIGAPDWLIQLPWVGGWIKETWSETFGNPETIK----NAL 141 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G+ + + L +S ++ALFF +RDG + +Q+ LF + Sbjct: 142 NALGMGTVFSYTRDLAAQVLHRFMSGFVTLLALFFIFRDGHGLGRQILDRSVRLFGSAGA 201 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + +R +R T GM ++ IG+G+VLG YW G+ V LG +TA++A++P A + Sbjct: 202 RYARHAVTAVRGTVNGMLLVGIGKGVVLGLGYWAVGLSQPVLLGTLTAVVALVPFAAKLV 261 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F A SIYL+++G+ L ++G I I D +RP L+GG +PFLPT G+ GGV Sbjct: 262 FGAASIYLIVQGHAMAGIVLVVYGFIITLIADNYVRPTLIGGAANIPFLPTLLGIFGGVE 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 MG +GLFIGP +MA++ +W++ Sbjct: 322 AMGFVGLFIGPTVMAILISLWRD 344 >gi|254253952|ref|ZP_04947269.1| hypothetical protein BDAG_03238 [Burkholderia dolosa AUO158] gi|124898597|gb|EAY70440.1| hypothetical protein BDAG_03238 [Burkholderia dolosa AUO158] Length = 356 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 106/349 (30%), Positives = 174/349 (49%), Gaps = 10/349 (2%) Query: 2 RETMLNP--QGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--E 56 R+T P Q I R M+ +L++L+ ++ F + A +I WP+ F S Sbjct: 9 RDTAARPRAQQIARAMLYTAFLLLALWVIRDFIPAIAWACVISIAMWPLLERFESHPLFR 68 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-G 115 + T +A + T + L I+P+ F + + ++ + +GIP+P + +P G Sbjct: 69 DRPTLIATVITTGISLLVILPVAAGFTEAVAQAHDVRMWLHTIQDNGIPLPDVVGRLPYG 128 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 +E W +L HP + NG FI F +FG L FM++ LF Sbjct: 129 AAQITEWWQANLGHPLHA---ATAMHGVNGEKFIA-FGRQFGTKLAHALLEFGFMLVTLF 184 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 R G +S L F A ++ + + T G+ ++ +GEG +LG AY Sbjct: 185 VILRAGHKLSGALLHGARRAFGASGAELIDRMVDAVYGTVTGLVVVGLGEGALLGVAYAF 244 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 AGVP LG++TA+ AM+P API F +++L + G +A + +G + +F+ + Sbjct: 245 AGVPHAALLGLVTAVAAMLPFCAPIVFCGAALWLFVHGATVSAVGVAAFGFVVVFVAEHF 304 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +RP L+GG +LPFL FG++GG T GL+GLF+GP LM ++ ++W E Sbjct: 305 VRPVLIGGSTRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAE 353 >gi|296116563|ref|ZP_06835173.1| hypothetical protein GXY_12188 [Gluconacetobacter hansenii ATCC 23769] gi|295976775|gb|EFG83543.1| hypothetical protein GXY_12188 [Gluconacetobacter hansenii ATCC 23769] Length = 379 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/347 (29%), Positives = 178/347 (51%), Gaps = 9/347 (2%) Query: 2 RETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 RET Q + R ++ +F ++++LY ++GF ++ I SWP+Y ++ ++ Sbjct: 32 RETQ-RAQRVARGLLALFFVVMALYTVRGFLPSLIWGGIFAIASWPLYVRARTRWHAATH 90 Query: 61 FLAVIA--TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGM 117 L + A T+ + +F+VP+ + + ++ + A Q G+PVP+W+ +P G Sbjct: 91 QLLLPAAFTLGIALIFLVPVTLFGLEAARDAEGVLHLLNNARQSGMPVPQWIDHLPIGAQ 150 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W HL P L + + + + G + IF I+ LFF Sbjct: 151 GLRAWWESHLQDPDDFSALLGSLRIGQSV----KMTQQVGTQLAHRGILFIFSILTLFFL 206 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG ++ +Q + F ++I+ + I T G+ ++ +GEG+V+G AY +AG Sbjct: 207 LKDGDAVIRQCLVVSRRAFGKRGERIALQIIASIHGTVAGLVLVGMGEGVVMGLAYLIAG 266 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P GV+TA+ AMIP A I+ VS LLIKG+ A + L G +F+ D +R Sbjct: 267 APHAFLFGVVTAVAAMIPFCAMIAIGIVSTLLLIKGSAVIAIVIMLVGLAVIFLADHLVR 326 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P L+GG +LPFL G++GG + LLGLF+GP +MA++ ++W+ Sbjct: 327 PALIGGSTQLPFLWVLTGILGGAESWNLLGLFVGPAIMAVLHMLWRN 373 >gi|162148843|ref|YP_001603304.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545409|ref|YP_002277638.1| hypothetical protein Gdia_3296 [Gluconacetobacter diazotrophicus PAl 5] gi|161787420|emb|CAP57015.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209533086|gb|ACI53023.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 381 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/351 (30%), Positives = 185/351 (52%), Gaps = 15/351 (4%) Query: 1 MRETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-- 57 MRE Q + R+++ MF L++LY ++GF ++ I +WP+Y++ + + Sbjct: 21 MRERH-RVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIFAIVAWPLYAATRERWKSLP 79 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GG 116 T L ++ T + +F+VP+ E + +V+ A G+PVP W+ +P G Sbjct: 80 GGTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANEARHSGMPVPGWIQRLPLGS 139 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIA 173 + W HL++P + L +F +G+ R ++ G++F IF I+ Sbjct: 140 ATLAGWWQDHLANPDDVSDLLHSFNIGHGMQVTQRVGTQIFHRGVLF-------IFAILT 192 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG S+++Q + F + I++ + I T G+ ++ +GEG ++G AY Sbjct: 193 LFFLLKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLVGLGEGALMGVAY 252 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +AG GV TA+ AMIP A I+ AV++ LL+KG A + G +FI D Sbjct: 253 LIAGAQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAILALGLAVIFIAD 312 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +RP L+GG ++PFL G++GGV + LLGLF+GP +M+++ ++W+ Sbjct: 313 HFVRPALIGGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLLWRN 363 >gi|189218730|ref|YP_001939371.1| Predicted permease, member of the PurR regulon [Methylacidiphilum infernorum V4] gi|189185588|gb|ACD82773.1| Predicted permease, member of the PurR regulon [Methylacidiphilum infernorum V4] Length = 350 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 176/329 (53%), Gaps = 9/329 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA---TVSVMCLFIV 76 +L++++ L+GF + A +I +WP YS ++ K +T L V + T+ V L Sbjct: 22 VLLAIWILRGFIVAMAWAFLIAIATWPFYS-WVRMKLPRNTPLWVSSLFFTLLVGALLFG 80 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKI 135 PL++ + E L + A + G P P W IP G W + W +L+ P++ Sbjct: 81 PLVYGVFKAGQEAIILGQYIAHAQKEGAPAPDWFQRIPFIGNWLTVRWNLNLATPEAA-- 138 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S+T + F+ R+ G+ + + F ++ LFF YRDG + ++ + + Sbjct: 139 -SKTLAHIDS-AFLFRWGKTIGVQVIHRIEVLAFTLLTLFFLYRDGRVLGKKFLAFIRKI 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +K ++ + VIR T G+ ++++GEG++LG AY + G+P V LG +T I+AMIP Sbjct: 197 LGTPGEKYAQHLVLVIRGTVNGLVLVSLGEGILLGIAYAIVGLPDPVTLGGVTGILAMIP 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 AP F +++LL +G I A + ++G LF+ D +RP L+GG + LPF G Sbjct: 257 FAAPPVFCTAALFLLAQGMIIQAIAIVIFGFSVLFVADHFIRPALIGGAVNLPFYWVLLG 316 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +GG+ + GLLGLF GP ++A + V WK+ Sbjct: 317 TLGGLSSFGLLGLFAGPTIIAALLVAWKD 345 >gi|254248509|ref|ZP_04941829.1| hypothetical protein BCPG_03340 [Burkholderia cenocepacia PC184] gi|124875010|gb|EAY65000.1| hypothetical protein BCPG_03340 [Burkholderia cenocepacia PC184] Length = 356 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + T +A + T S+ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRNRPTLIATVITTSISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + +L + +GIP+P +S +P G +E W +L HP + Sbjct: 95 TQAFAQAHDLREWLHTIQDNGIPLPDVVSRLPYGAAQITEWWQANLGHPLHA---ATAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 NG FI F +FG L FM++ LF R G +S L F Sbjct: 152 GVNGEKFIA-FGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWI 355 >gi|330994022|ref|ZP_08317952.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758968|gb|EGG75482.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 399 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 8/322 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 Y ++GF ++ I SWP+Y+ + L V T+++ +F+ PL Sbjct: 74 YTVRGFLPSLIWGCIFAIASWPLYARARQRWPSRAHQAMLPVAFTLAIALIFLGPLALFG 133 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW-TKHLSHPQSLKILSETFL 141 E + ++ + A GIPVP W+S +P G E W HL P + L + Sbjct: 134 LEAGREAEGVLRLLNDARHSGIPVPPWISRLPYGQQTIETWWNDHLKDPADISALLGSMN 193 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G+ + + G L L IF I+ LFF +DG ++ +Q ++ F + Sbjct: 194 IGQGM----KVTQQLGSQVLHRGLLFIFAILTLFFLLKDGDAVIRQSLNVSRRAFGKRGE 249 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I+ + + + G+ ++ IGEG+++G AY +AG P GVITAI AMIP A I+ Sbjct: 250 RIALQMIASVHGSVSGLVLVGIGEGMLMGLAYLVAGAPHPFLFGVITAIAAMIPFCALIA 309 Query: 262 FTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 AV++ LL+ G + A + L+G +F+ D +RP L+GG +LPFL G++GG Sbjct: 310 IGAVALLLLVNTGAVLTAVAIVLFGLAVIFLADHLVRPALIGGTTQLPFLWVLMGILGGA 369 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 + LLGLF+GP +MA++ ++W Sbjct: 370 ESWSLLGLFVGPAIMAVLHMLW 391 >gi|116692369|ref|YP_837902.1| hypothetical protein Bcen2424_4274 [Burkholderia cenocepacia HI2424] gi|116650369|gb|ABK11009.1| protein of unknown function UPF0118 [Burkholderia cenocepacia HI2424] Length = 356 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + +L + +GIP+P +S +P G +E W +L HP + Sbjct: 95 TQAFAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHPLHA---ATAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 NG FI F +FG L FM++ LF R G +S L F Sbjct: 152 GVNGEKFIA-FGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWI 355 >gi|206563261|ref|YP_002234024.1| hypothetical protein BCAM1409 [Burkholderia cenocepacia J2315] gi|198039301|emb|CAR55266.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 356 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + + T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRDRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P +S +P G +E W +L HP Sbjct: 95 TQAIAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHPLHAATAMHGVN 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I F +F ++ + L++ FM++ LF R G +S L F Sbjct: 155 SEKFIAFGRQFGTKLAHVLLEFG----FMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWI 355 >gi|289164173|ref|YP_003454311.1| predicted permease [Legionella longbeachae NSW150] gi|288857346|emb|CBJ11174.1| putative predicted permease [Legionella longbeachae NSW150] Length = 359 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 106/343 (30%), Positives = 182/343 (53%), Gaps = 17/343 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMCLFI 75 II +SL+ + F ++ A II ++P+Y F K++ S L ++ L + Sbjct: 17 IIALSLFIIHRFIPSMIWASIIVIATYPLYERWRRFFGSKDDLSALLFTTLIGLLLLLPL 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW-ASEL---WTKHLSHPQ 131 L+ L + E++ ++ + N+ G P +L + P W S+L W ++ P Sbjct: 77 SWLVGLL---IKELQIFINFLQSLNEKGGMAPEFLKNFP---WIGSDLVVYWDNNIGKPG 130 Query: 132 SLK-ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +K +LS L + + + G + + F +++LFFFYRDG + Q+ Sbjct: 131 MIKGLLSNIHLSLTPTSY---YVKQIGSNLAHRSVQVGFTLLSLFFFYRDGDRLITQIYL 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +GE+ W + + +PK +R+T G ++ +G G ++G Y L G P+ +G ITA+ Sbjct: 188 VGENCLGKRWFRYADRLPKALRATVNGTIVVGLGVGFLMGVCYGLVGFPAPTLVGFITAL 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 AMIP PI F V++ L G++F A + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 248 AAMIPFVVPIVFITVAMILFAFGSMFGAIAVLVWGTLVMFVADHFIKPALIGGAIELPFL 307 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FG++GGV T+GLLGLF+GP++M L +W+E + N+ Sbjct: 308 AVLFGILGGVETLGLLGLFVGPLVMVLFVTLWQEPQIRTDCNQ 350 >gi|170735629|ref|YP_001776889.1| hypothetical protein Bcenmc03_3243 [Burkholderia cenocepacia MC0-3] gi|169817817|gb|ACA92399.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 356 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P +S +P G +E W +L HP Sbjct: 95 TQAIAQAHDLREWLHSIQDNGIPLPDVISRLPYGAAQITEWWQANLGHPLHAATAMHGVN 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I F +F ++ + L++ FM++ LF R G +S L F Sbjct: 155 SEKFIAFGRQFGTKLAHVLLEFG----FMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWI 355 >gi|27383175|ref|NP_774704.1| hypothetical protein blr8064 [Bradyrhizobium japonicum USDA 110] gi|27356349|dbj|BAC53329.1| blr8064 [Bradyrhizobium japonicum USDA 110] Length = 387 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/328 (30%), Positives = 168/328 (51%), Gaps = 6/328 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-TVSVMCLFIVP 77 I+ +SL+ GF + ++ A I+ WP+Y +F ++ + + A T V + P Sbjct: 52 IVALSLWTAAGFLSALIWATILAIALWPLYVAFANRVMSGPSGWSAFAFTCFVAVILFTP 111 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + Y + E+ + + A + GI VP W++ +P A + W +LS PQ+ Sbjct: 112 MALAIYQVAQQSGEIAAWLKKARESGIEVPDWIARLPIAAEIAQQWWRANLSDPQA---- 167 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + +LK D + G L ++F ++ALF +G S++ + E + Sbjct: 168 ATGWLKAISADNASDLFNSLGGQLLHRMFMLLFSLVALFVLLSNGRSVASRFLETSERIL 227 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + IR T G ++A+GEGL++G Y +AGVP+ V + T AM+P Sbjct: 228 GHPGEGVVEKIVDSIRGTVNGTVVVAVGEGLLIGVGYLVAGVPNAVMFTIFTTAFAMLPF 287 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 GA +F+A ++ L+ GN A +F WGA+ + D + P LVGG +LPFL F G+ Sbjct: 288 GAWAAFSAAALTLISNGNEAAAAGVFCWGAVIMLAGDHFVWPVLVGGSARLPFLFAFVGI 347 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKE 344 GG+ GL+GLF+GPV+MA + +W+E Sbjct: 348 FGGLAAFGLIGLFLGPVVMAALLTVWRE 375 >gi|188584250|ref|YP_001927695.1| hypothetical protein Mpop_5064 [Methylobacterium populi BJ001] gi|179347748|gb|ACB83160.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 359 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 170/323 (52%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 Y L GF ++ AL++ WP+++ + + + T V L ++P+ L Sbjct: 32 YILHGFLRALVWALVLAIALWPLFNRARRRFPPGRHNILWPAVFTGLVAGLLLLPIAGLA 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSETFL 141 E +L++ A ++GIPVP +++ +P G A +E W HL+H ++E Sbjct: 92 VEAGREAHDLLAYAREAERNGIPVPDFVAHLPYGAAAVTEWWNAHLAHAGLAHEVTERLN 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ D G + + F ++ALFF +R+G ++ Q + LF + Sbjct: 152 TTSNRDLT----RTLGAGLVHRVVLFGFCLLALFFLFREGDAVVAQSLRASQRLFGPRGE 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++R + + T G+ ++ IGEG +LG Y LAGVP V G +TA+ AMIP GAP++ Sbjct: 208 RVARQMVASVHGTVDGLVLVGIGEGFLLGIVYALAGVPHPVLFGALTAVAAMIPFGAPLA 267 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 268 FGLAAVLLLAGGAVVPAAIVVAAGFVITFVADHFVRPALIGGTTRLPFLWVLLGILGGVE 327 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP +MA + ++W+E Sbjct: 328 TFGLLGLFVGPAVMAALILLWRE 350 >gi|209516308|ref|ZP_03265165.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503244|gb|EEA03243.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 364 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 169/327 (51%), Gaps = 7/327 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 ++L++L+ ++ F V A ++ WP+ + +T LA + T+ + L ++ Sbjct: 37 LVLLALWVVRDFIVVVAWAGVVSIALWPLLHKVAGSRWFRGRTTVLATVFTLVIAVLVLL 96 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKI 135 P+ + E EL ++GI VP +++ +P G+ + W +L+ P + Sbjct: 97 PVALGLAQALREAHELSEWFRGVQENGIAVPDFVNRLPFGVPQITAWWQANLAQP----L 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +K + + +FG L + FM++ LF ++ G +S L Sbjct: 153 RDSAAMKGLHSETVMTLGRQFGARALHAAMVFAFMLVTLFVIFQAGPRLSGSLLKAARRG 212 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + +R T G+ ++ GEG++LG AY + GVP LG +TAI AM+P Sbjct: 213 FGDSGADLVEQMATAVRGTVSGLIVVGAGEGVLLGFAYLVTGVPHAALLGFVTAIAAMLP 272 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 API+F +++LL++G++ A L ++GAI +FI + +RP L+G +LPFL FG Sbjct: 273 FCAPITFGLAALWLLVQGSVVPAAGLAVFGAIVVFIAEHFVRPVLIGNSTRLPFLLVLFG 332 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++GG T GLLG+FIGP LM ++ V+W Sbjct: 333 ILGGAETFGLLGIFIGPALMTVLMVLW 359 >gi|221196526|ref|ZP_03569573.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221203195|ref|ZP_03576214.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221177129|gb|EEE09557.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221183080|gb|EEE15480.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 356 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAIAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 151 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 211 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATAWAVVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ V+W E Sbjct: 331 TFGLIGLFVGPALMTVLTVLWAE 353 >gi|189352951|ref|YP_001948578.1| putative permease [Burkholderia multivorans ATCC 17616] gi|189336973|dbj|BAG46042.1| putative permease [Burkholderia multivorans ATCC 17616] Length = 356 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAMAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 151 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 211 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ V+W E Sbjct: 331 TFGLIGLFVGPALMTVLTVLWAE 353 >gi|161520866|ref|YP_001584293.1| hypothetical protein Bmul_4321 [Burkholderia multivorans ATCC 17616] gi|160344916|gb|ABX18001.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] Length = 380 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 59 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAMAL 118 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 119 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 174 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 175 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 234 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 235 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 294 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 295 FCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 354 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ V+W E Sbjct: 355 TFGLIGLFVGPALMTVLTVLWAE 377 >gi|163853947|ref|YP_001641990.1| hypothetical protein Mext_4551 [Methylobacterium extorquens PA1] gi|163665552|gb|ABY32919.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 359 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 7/332 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSET 139 L E +L++ A ++GIPVP +++ +P G A +E W HL+H LSE Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSER 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+ D G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDLT----RSLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPR 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP Sbjct: 206 GERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAP 265 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GG Sbjct: 266 LAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 V T GLLGLF+GP +MA + ++W+E +E Sbjct: 326 VETFGLLGLFVGPAVMAALILLWREFTEGSEE 357 >gi|221210158|ref|ZP_03583139.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221170846|gb|EEE03312.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 356 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAIAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 151 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 211 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATAWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ V+W E Sbjct: 331 TFGLIGLFVGPALMTVLTVLWAE 353 >gi|218532888|ref|YP_002423704.1| hypothetical protein Mchl_5011 [Methylobacterium chloromethanicum CM4] gi|218525191|gb|ACK85776.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 359 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 7/332 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSET 139 L E +L++ A ++GIPVP +++ +P G A +E W HL+H LSE Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVAHLPYGAAAITEWWNAHLAHAGLAHELSER 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+ D G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDLT----RSLGAGLVHRVVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPR 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP Sbjct: 206 GERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAP 265 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GG Sbjct: 266 LAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 V T GLLGLF+GP +MA + ++W+E +E Sbjct: 326 VETFGLLGLFVGPAVMAALILLWREFTEGSEE 357 >gi|54293714|ref|YP_126129.1| hypothetical protein lpl0767 [Legionella pneumophila str. Lens] gi|53753546|emb|CAH15001.1| hypothetical protein lpl0767 [Legionella pneumophila str. Lens] Length = 350 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 13/332 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSVMCLFI 75 I++ SLY + F ++ A II ++P+Y+ K +S FL T + LF+ Sbjct: 17 IVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLF---TTLMGLLFL 73 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +PL +L + E + ++ + N+ G P + +IP G + W ++ P S+K Sbjct: 74 IPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPGSIK 133 Query: 135 ILSETFLKTNGIDFIPR--FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 FL + P + + G+ + F ++ LFFFYRDG + Q+ +G Sbjct: 134 ----EFLSNLHVTLTPTSYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQIQHIG 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 E+ W + S +P +R T G ++ IG G+++G Y L G P+ G ITA+ A Sbjct: 190 EYCLGDRWFRYSDKLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFITALAA 249 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 250 MIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLAV 309 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 310 LFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|148360616|ref|YP_001251823.1| transmembrane permease [Legionella pneumophila str. Corby] gi|148282389|gb|ABQ56477.1| transmembrane permease [Legionella pneumophila str. Corby] gi|307609525|emb|CBW99023.1| hypothetical protein LPW_08081 [Legionella pneumophila 130b] Length = 350 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 13/332 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSVMCLFI 75 I++ SLY + F ++ A II ++P+Y+ K +S FL T + LF+ Sbjct: 17 IVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLF---TTLMGLLFL 73 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +PL +L + E + ++ + N+ G P + +IP G + W ++ P S+K Sbjct: 74 IPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPGSIK 133 Query: 135 ILSETFLKTNGIDFIPR--FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 FL + P + + G+ + F ++ LFFFYRDG + Q+ +G Sbjct: 134 ----EFLSNLHVTLTPTSYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQIQHIG 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 E+ W + S +P +R T G ++ IG G+++G Y L G P+ G ITA+ A Sbjct: 190 EYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFITALAA 249 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 250 MIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLAV 309 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 310 LFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|170696533|ref|ZP_02887657.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170138580|gb|EDT06784.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 372 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/355 (27%), Positives = 184/355 (51%), Gaps = 21/355 (5%) Query: 3 ETMLNPQGIMRW------MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK- 55 +++L P+ + + + + ++L++L+ ++ F V A ++ WP+ + Sbjct: 23 QSLLTPERVKKQRAASLALYIGLVLLALWVVRDFLPVVGWAAVLAIALWPLLRKVEGSRW 82 Query: 56 -EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +T +A + T+++ L ++P+ + E +L A ++GI +P ++ +P Sbjct: 83 LTGRTTLIAAVLTLAIALLVVLPVGVGIAQALREAHDLTDWFKAAQENGIAMPDFIHRLP 142 Query: 115 GGMWASELW-----TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 G +E W T L ++K L T + T G FG + F Sbjct: 143 FGAHQAEAWWQAYLTPPLRDSAAMKGLHSTTVVTLG--------RHFGARAVHAVTVFAF 194 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 M++ LF ++ G +S L + F ++ + + +R T G+ ++ +GEG +L Sbjct: 195 MLVTLFVIFQAGPRLSGALARGLQRGFGEDGAQLVQRMATAVRGTVSGLVVVGLGEGALL 254 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G AY++ G+P L +ITAI AM+P API+F+ +++L +G++ +A L ++G+I + Sbjct: 255 GVAYFVTGLPHVALLALITAIAAMLPFCAPITFSLAALWLFSQGSVASAIGLLVFGSIVV 314 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F+ + +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + Sbjct: 315 FVAEHFVRPVLIGSSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTD 369 >gi|240141401|ref|YP_002965881.1| hypothetical protein MexAM1_META1p5000 [Methylobacterium extorquens AM1] gi|240011378|gb|ACS42604.1| Conserved hypothetical protein, putative inner membrane protein, putative permease [Methylobacterium extorquens AM1] Length = 359 Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 102/325 (31%), Positives = 168/325 (51%), Gaps = 7/325 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSET 139 L E +L++ A ++GIPVP +++ +P G A ++ W HL+H LSE Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTDWWNAHLAHAGLAHELSER 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+ D G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDLT----RSLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPR 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP Sbjct: 206 GERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAP 265 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GG Sbjct: 266 LAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 V T GLLGLF+GP +MA + ++W+E Sbjct: 326 VETFGLLGLFVGPAVMAALILLWRE 350 >gi|262377359|ref|ZP_06070583.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262307812|gb|EEY88951.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 376 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 98/353 (27%), Positives = 187/353 (52%), Gaps = 20/353 (5%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M++ Q ++ + + FI I +S + LK F PV+ A II + +WP+Y S + Sbjct: 1 MQQYAPTLQKVLLFGLFFILIFLSFHILKYFIIPVVWAAIIAYMTWPLYQSVLRLCGNRP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIP-G 115 T A + ++V+ +F +P +F + E + L + + V + + VP ++ +P Sbjct: 61 TLSATVMILAVILVFGLPFIFAIFMLQHEGRNLYFELQRQVFSGH--LNVPDFIRGLPIV 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC----LSIIFMI 171 G + + + PQS+ + T+++ + +G + L+ + F + Sbjct: 119 GKEITRTLNEINTDPQSIALSVSTWIQGH---------LNYGKVVLNEVSKNIFKLCFAV 169 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++LFFFYRDG +I Q+ E + + R+ G+ + AI + L+ G Sbjct: 170 LSLFFFYRDGQTILNQVRKAFEMVVGPRVHHYFSTISATTRAVVYGVGLTAIAQSLLAGL 229 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +Y++AGVP+ + L ++T I A+IP G P++++AV+++L +G A + +WG + Sbjct: 230 SYFVAGVPNPMVLTIVTFIFALIPFGPPLAYSAVALWLFSQGQTIEAIGVMVWGVCIVST 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D +RP ++ G ++PFL FG++GG+ + GL+G+FIGPV++A++ IW+E Sbjct: 290 ADNVIRPLVISGATQIPFLLIMFGVLGGIASFGLVGVFIGPVILAVLLAIWRE 342 >gi|217968723|ref|YP_002353957.1| hypothetical protein Tmz1t_0268 [Thauera sp. MZ1T] gi|217506050|gb|ACK53061.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 363 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 33/350 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S L F PV A+II F +WP+Y ++ T A++ T+ + FI+P L++ Sbjct: 26 SYAVLHVFIVPVAWAIIIAFATWPLYRKLRARLRRYPTVSALLMTLLLSAAFILPALWMG 85 Query: 83 YYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETF 140 E+ ++ V + G + +P ++ +P G W L P + + + Sbjct: 86 ALLRTEVGVAIATVTAQIKAGSLALPDFIRSMPWVGDWLQSLLDSLTGDPDAFRAQLTEW 145 Query: 141 LKTNG------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---- 190 ++ I + R A++ G F +I +FF YRDG + Q+ Sbjct: 146 VRQGSDQAVALIGDVGRNAAKLG-----------FALITVFFLYRDGDRVLAQVQVVLHR 194 Query: 191 -LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 LGE + AY + + V+ G+ A+G+GLV G YW AG+P+ V LG +TA Sbjct: 195 FLGERV-DAYLAAVGGMTKAVV----WGLIATALGQGLVAGLGYWWAGLPAPVLLGAVTA 249 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++AMIP G P ++ ++ ++LL+ G+ L LWG + + VD +RP ++ ++PF Sbjct: 250 LIAMIPFGTPFAWGSLGVWLLVSGDTAAGIGLLLWGTLVVSWVDNLIRPLVISNATQIPF 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L FG++GG+ GL+GLF+GPV++A++ +W+E I E + +S N Sbjct: 310 LLVMFGVLGGLAAFGLVGLFLGPVVLAVLMAVWREWI----EESDLVSLN 355 >gi|78062585|ref|YP_372493.1| hypothetical protein Bcep18194_B1735 [Burkholderia sp. 383] gi|77970470|gb|ABB11849.1| protein of unknown function UPF0118 [Burkholderia sp. 383] Length = 356 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 9/332 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 +++++L+ ++ F + A +I WP+ F S + T +AV+ T ++ L ++ Sbjct: 29 LLVIALWVIRDFIPAIAWACVIAIAMWPMLKRFESHRLFRNRPTLIAVVITAAISLLVVL 88 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKI 135 P+ + + +L + +GIPVP + +P G +E W +L HP Sbjct: 89 PVAVAATQAIGQAHDLREWLRTVQDNGIPVPDVIGRLPYGAAQITEWWQANLGHPLHA-- 146 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + N F+ F +FG L FM++ LF R G +S L Sbjct: 147 -ASAMHGVNSEKFLA-FGRQFGTKLAHALLEFGFMLVTLFVILRAGHKLSGALLQGARRA 204 Query: 196 FPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + I R+V V T G+ ++ +GEG +LG AY LAGVP LG++TAI AM+ Sbjct: 205 FGRSGAELIERMVAAVF-GTVTGLVVVGLGEGALLGIAYALAGVPHAALLGLVTAIAAML 263 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P AP+ F +++L ++G A + + G + +F+ + +RP L+G +LPFL F Sbjct: 264 PFCAPVVFCGAALWLFVQGATMWAIVVAVLGFVVVFVAEHFVRPVLIGSSARLPFLLVLF 323 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 324 GILGGAETFGLIGLFVGPALMTVLTMLWAEWI 355 >gi|170751399|ref|YP_001757659.1| hypothetical protein Mrad2831_5018 [Methylobacterium radiotolerans JCM 2831] gi|170657921|gb|ACB26976.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 372 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/348 (31%), Positives = 174/348 (50%), Gaps = 24/348 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS-ALIIGFTSWPIYSSFISK--KEESSTFLAVI 65 QG R +++ + ++ F P L+ A+++ WPIY + + + L + Sbjct: 28 QGAARVLLVLALTALGLWILHEFLPALAWAVVLAIALWPIYQRLEHRFPPGKHNILLPTL 87 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T +V +F+ PL L E ++ V A +GIP P +L +P G A+ W Sbjct: 88 MTAAVALVFLAPLAILGIQAAREAHDVAEFVRNAEANGIPAPEFLQHLPYGAAQATAWWN 147 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRF-------ASR-FGMIFLDYCLSIIFMIIALFF 176 +L H Q+ G D + RF ASR G + + F ++ALFF Sbjct: 148 DNLGHAQA------------GSDLLRRFENHSVLGASRNVGREVVHRIVLFGFSLVALFF 195 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +RD ++ Q + LF ++++R + + T G+ ++ +GEG VLG Y A Sbjct: 196 LFRDWRTVRDQSLTACHRLFGPRGERVARQMVASVHGTVDGLVLVGLGEGFVLGIVYHFA 255 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP V LG TA+ AMIP GA ++ ++ L+ G++ A + G + F+ D + Sbjct: 256 GVPHPVLLGAFTAVAAMIPFGAAVAIAVAALLLVAAGSVTAALVVAAAGLVVTFVADHFI 315 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 RP L+GG KLPFL G++GGV T GLLGLF+GP +MA + ++W+E Sbjct: 316 RPALIGGTTKLPFLWVLLGILGGVETFGLLGLFVGPAVMAALVLLWRE 363 >gi|114327071|ref|YP_744228.1| hypothetical protein GbCGDNIH1_0407 [Granulibacter bethesdensis CGDNIH1] gi|114315245|gb|ABI61305.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 391 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 6/349 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS-ALIIGFTSWPIYSSFISK-KEESSTFLAVIA 66 Q I ++ II + G F P L+ A + +WP+Y + L ++ Sbjct: 39 QKIAFCVLALIITAGALWTLGSFMPALAWAAVFAIATWPLYRRARNAWPGGGRVLLPLLF 98 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV+V LF+ PL + + ++ V +G+PVP LS +P G E W + Sbjct: 99 TVAVTLLFLGPLTLAGIEVANDARGVIDGVEHVLHNGLPVPSALSSLPFGSPVVEWWQDN 158 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + L+ ++ + + + + FM++ LFF YRDG +++ Sbjct: 159 LGSGEGAARLARHIDRSQ----LVAISRHLSAVLAHRVVLFSFMLVTLFFLYRDGDTLTA 214 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 QL F + ++ R V I T G+ ++ + EG+++G Y +AGVP G Sbjct: 215 QLSRASARAFGPHGARVGRQVIASIHGTVDGLVLVGLAEGILIGIGYAIAGVPHPTLFGA 274 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +TAI AMIP GAP +F ++ L G + +A + +G + +FI D +RPFL+GG + Sbjct: 275 VTAIAAMIPFGAPAAFLLAALLLAANGALLSAAIIAGYGCLIVFIADHFVRPFLIGGATR 334 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LPF+ G++GGV GL GLF+GP LMA + +W+E A +N+++ Sbjct: 335 LPFILVLLGILGGVECWGLFGLFLGPALMAAVTHLWREFSAAGPDNRDR 383 >gi|172063209|ref|YP_001810860.1| hypothetical protein BamMC406_4180 [Burkholderia ambifaria MC40-6] gi|171995726|gb|ACB66644.1| protein of unknown function UPF0118 [Burkholderia ambifaria MC40-6] Length = 356 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 9/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S++ T +A + TV V L I+P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRFESERWFRNRPTLIATVITVGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P ++ +P G +E W +L HP Sbjct: 95 GQAISQEHDLRMWLQSVQDNGIPLPDVIARLPYGAAQVTEWWQANLGHPLHA---GAAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 +G FI F +FG FM++ LF R G +S L F P Sbjct: 152 GASGEKFIA-FGRQFGTKVAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGG 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + I R+V V T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVY-GTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPI 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 270 VFCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGA 329 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ ++W E Sbjct: 330 ETFGLIGLFVGPALMTVLTMLWAE 353 >gi|296159881|ref|ZP_06842702.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295889864|gb|EFG69661.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 360 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 171/329 (51%), Gaps = 7/329 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 ++L++L+ ++ F A V A +I WP+ + +T +A + T+ + L ++ Sbjct: 33 LVLLALWVVRDFIAVVAWAGVIAIALWPLLRKVEGNRWFTGRTTLIAAVLTLLIALLVVL 92 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKI 135 P+ + E +L A ++GIP+P ++ +P G+ S W +L+ P + Sbjct: 93 PVGIGIAQALREAHDLNEWFKTAQENGIPLPDFIQRLPFGVQQISAWWQANLTQP----L 148 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +K + FG + FM++ LF ++ G +S L Sbjct: 149 RESAAMKGLHSPAVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQAGPRLSGALLKGMRRG 208 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F ++ + + +R T G+ ++ +GEG +LG AY++ G+P L +TAI AM+P Sbjct: 209 FGDDGAQLLQRMAAAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHVALLAFVTAIAAMLP 268 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 AP++F +++LL++G++ A L ++G++ +FI + +RP L+G +LPFL FG Sbjct: 269 FCAPLTFGIAALWLLLQGSVAAAIGLAVFGSVVVFIAEHFVRPVLIGNSTRLPFLLVLFG 328 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++GG T GLLG+FIGP LM ++ V+W + Sbjct: 329 ILGGAETFGLLGIFIGPALMTVLMVLWTD 357 >gi|115358452|ref|YP_775590.1| hypothetical protein Bamb_3702 [Burkholderia ambifaria AMMD] gi|115283740|gb|ABI89256.1| protein of unknown function UPF0118 [Burkholderia ambifaria AMMD] Length = 356 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 161/324 (49%), Gaps = 9/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ S++ T +A + TV V L I+P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRLESERWFRNRPTLIATVITVGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P ++ +P G +E W +L HP Sbjct: 95 GQAIAQEHDLRMWLQSVQDNGIPLPDVIARLPYGAAQVTEWWQANLGHPLHA---GAAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 +G FI F +FG FM++ LF R G +S L F P Sbjct: 152 GASGEKFIA-FGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGG 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + I R+V V T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVY-GTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPI 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 270 VFCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGA 329 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ ++W E Sbjct: 330 ETFGLIGLFVGPALMTVLTMLWAE 353 >gi|170702831|ref|ZP_02893681.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|170132267|gb|EDT00745.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] Length = 356 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 161/324 (49%), Gaps = 9/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S++ T +A + T V L I+P+ Sbjct: 35 WVIRDFIPAIAWACVIAIALWPLLKRFESERWFRNRPTLIATVITAGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P ++ +P G +E W +L HP Sbjct: 95 GQAISQEHDLRMWLQSIQDNGIPLPDVIARLPYGATQVTEWWQANLGHPLHA---GAAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 +G FI F +FG FM++ LF R G +S L F P Sbjct: 152 GASGEKFIA-FGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGG 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + I R+V V T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVY-GTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPI 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 270 VFCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGA 329 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ ++W E Sbjct: 330 ETFGLIGLFVGPALMTVLTMLWAE 353 >gi|262370626|ref|ZP_06063951.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314426|gb|EEY95468.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 373 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/339 (28%), Positives = 178/339 (52%), Gaps = 8/339 (2%) Query: 9 QGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ + ++FI+ +S LK F PVL A II + +WP+Y S T A I Sbjct: 9 QKVLLFGLIFILFYLSFQVLKYFIVPVLWAAIIAYITWPLYHSVQKLCGPRPTLSATIMI 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GGMWASELWTK 125 V+ + +PL F + E + L ++ G + VP+++ D+P G + + Sbjct: 69 SMVVLVVGIPLTFAIFMLQHEGRNLFYELQRQVFSGHLDVPQFIRDLPIIGKEVTRTLKE 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P S+ + +++ +++ S C F +++LFFFYRDG +I Sbjct: 129 INTDPNSIVQNVSGWFQSH-LNYGRLVLSEISKNIFKLC----FAVMSLFFFYRDGQTIL 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + L+ G +Y++AGVP+ + L Sbjct: 184 NQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQALLAGLSYFVAGVPNPMVLT 243 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T I A+IP G P++++AVS++L +G A + +WG + D +RP ++ G Sbjct: 244 IVTFIFALIPFGPPVAYSAVSLWLFSQGQTIEAIGVMVWGVCVVSTADNVIRPLVISGAT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++PFL FG++GG+ + G++GLF+GPV++A++ IW+E Sbjct: 304 QIPFLLIMFGVLGGLASFGMVGLFVGPVILAVLLAIWRE 342 >gi|323529942|ref|YP_004232094.1| hypothetical protein BC1001_5660 [Burkholderia sp. CCGE1001] gi|323386944|gb|ADX59034.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 372 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/355 (27%), Positives = 182/355 (51%), Gaps = 21/355 (5%) Query: 3 ETMLNPQGIMRW------MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK- 55 +++L P+ + + + + ++L++L+ ++ F V A ++ WP+ + Sbjct: 23 QSLLTPERVKKQKAASLALYIGLVLLALWVVRDFLPVVGWAGVLAIALWPLLRRVEGSRW 82 Query: 56 -EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +T +AV+ T+++ L ++P+ + E +L A + GI +P ++ +P Sbjct: 83 LSGRTTLIAVVLTLAIALLVVLPVGIGIAQALREAHDLSDWFKAAQETGIAMPDFIHRLP 142 Query: 115 -GGMWASELWTKHLSHP----QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 G A W +L+ P ++K L T + T G FG + F Sbjct: 143 FGAREAEAWWQAYLAAPLRDSAAMKGLHSTTVVTLG--------RHFGARAVHAVTVFAF 194 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 M++ LF ++ G +S L + F ++ + +R T G+ ++ +GEG +L Sbjct: 195 MLVTLFVIFQAGPRLSGALARGLQRGFGEDGAQLVERMAIAVRGTVSGLVVVGLGEGALL 254 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G AY++ G+P L +ITAI AM+P API+F +++L +G++ A L ++G++ + Sbjct: 255 GVAYFVTGLPHVALLALITAIAAMLPFCAPITFGLAALWLFSQGSVAGAIGLLVFGSVVV 314 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F+ + +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + Sbjct: 315 FVAEHFVRPVLIGSSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTD 369 >gi|187919648|ref|YP_001888679.1| hypothetical protein Bphyt_4945 [Burkholderia phytofirmans PsJN] gi|187718086|gb|ACD19309.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 360 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 178/334 (53%), Gaps = 17/334 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 ++L++L+ ++ F A V A ++ WP+ + +T +A + T+++ L ++ Sbjct: 33 LVLLALWVVRDFIAVVAWAAVLAIALWPLLRKVEGNRWFTGRTTLIAAVLTLAIALLVVL 92 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHP----Q 131 P+ + E ++ A ++GIP+P ++ +P G AS W +L+ P Sbjct: 93 PVGVGIAQALREAHDMSDWFKDAQENGIPLPDFIQHLPFGAQQASAWWQANLAQPLRGSA 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII-FMIIALFFFYRDGFSISQQLDS 190 ++K L T + T G F R A + +++ FM+I LF ++ G +S L Sbjct: 153 AMKGLHSTTVMTLGRHFGARAA---------HAVAVFGFMLITLFVIFQAGPRLSSSLLK 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F ++ + +R T G+ ++ +GEG +LG AY++ G+P L ++TAI Sbjct: 204 GVRRGFGEDGAQLLLRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHVALLALVTAI 263 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 AM+P AP++F +++L+ +G++ L ++G++ +FI + +RP L+G +LPFL Sbjct: 264 AAMLPFCAPLTFGLAALWLVSQGSVAAGVGLAVFGSVVVFIAEHFVRPVLIGNSTRLPFL 323 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GG T GLLG+FIGP LM ++ V+W + Sbjct: 324 LVLFGILGGAETFGLLGIFIGPALMTVLMVLWTD 357 >gi|134293526|ref|YP_001117262.1| hypothetical protein Bcep1808_4840 [Burkholderia vietnamiensis G4] gi|134136683|gb|ABO57797.1| protein of unknown function UPF0118 [Burkholderia vietnamiensis G4] Length = 379 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + + T +A + T V L ++P+ Sbjct: 58 WVIRDFLPAIAWACVIAIALWPLLKRFESNRWFRDRPTLIATVVTAGVSLLVVLPVAIAL 117 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GI +P +S +P G ++ W +L HP + + T + Sbjct: 118 GQAIAQAHDLRIWLHSIQDNGIALPDVVSRLPYGSTQIADWWQANLGHP----LHAGTAM 173 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G +S L F Sbjct: 174 HGANGEKVIAFGRQFGTKLAHALFEFGFMLVTLFVIMRAGHQLSGALLLGARRAFGRGGA 233 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + T G+ ++ +GEG +LG AY LAG+P LG +TA+ AM+P API Sbjct: 234 ALIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGLPHAALLGFVTAVAAMLPFCAPIV 293 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 294 FCGAALWLFVQGATAWAIVVLALGIVVVFVAEHFVRPVLIGNSTRLPFLLVLFGILGGAE 353 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ ++W E Sbjct: 354 TFGLIGLFVGPALMTVLTMLWSE 376 >gi|74318619|ref|YP_316359.1| hypothetical protein Tbd_2601 [Thiobacillus denitrificans ATCC 25259] gi|74058114|gb|AAZ98554.1| membrane protein, putative [Thiobacillus denitrificans ATCC 25259] Length = 352 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 178/338 (52%), Gaps = 6/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++FI ++ + L F A + A I+ + +WP+Y + T A++ T++V+ + + Sbjct: 19 LVFIFGLTFWVLSPFLAALAWAGILAYATWPLYQRLSRRLAGRDTLCALLMTIAVVTMLL 78 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P++++ ++ +++ L G+P +P + PGG W + + + + P ++ Sbjct: 79 LPMIWVTSMLAGDVSAASAQLRLVATEGLPPLPPGVRSWPGGDWLAAQYARIQADPAWVR 138 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T+ + A G + L++ ALFF +R G S+ Q+ + Sbjct: 139 AQIDALGLTDA-QRLKAVAGGVGRNVAKFALAVF----ALFFLFRHGASLLSQVRRVATR 193 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V +R+ G+ + A+ +G + YW+AGV + V GVITA++A+I Sbjct: 194 WLGGAARGYIHAVGVTVRAVVFGIVLTALAQGALAALGYWVAGVAAPVLWGVITALVALI 253 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P+ + +S+ LL +G A LFLWGA+ + VD +RP ++ GP ++PFL F Sbjct: 254 PFVGPVVWIGLSLSLLAQGESQAALGLFLWGALVVSWVDNLIRPLVISGPTRIPFLLVFL 313 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG++ GL+GLF+GP L+A+ IW+E ++ ++ + Sbjct: 314 GVLGGLQAFGLIGLFLGPALLAISVAIWREWLVRVESS 351 >gi|171317803|ref|ZP_02906983.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] gi|171097027|gb|EDT41884.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] Length = 356 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/324 (30%), Positives = 161/324 (49%), Gaps = 9/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + T +A + TV V L ++P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRFESDRWFRNRPTLIATVITVGVSLLVVLPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P +++ +P G ++ W +L HP Sbjct: 95 GQAISQEHDLRMWLHSIQDNGIPLPDFIARLPYGAAQITDWWQANLGHPLHA---GTAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 G FI F +FG FM++ LF R G +S + F P Sbjct: 152 GATGEKFIA-FGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGAMLHGARRAFGPGGG 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + I R+V V T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVY-GTVTGLVVVGLGEGAILGIAYALAGVPHAALLGLVTAVAAMLPFCAPI 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 270 VFCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGA 329 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 T GL+GLF+GP LM ++ ++W E Sbjct: 330 ETFGLIGLFVGPALMTVLTMLWAE 353 >gi|149926550|ref|ZP_01914811.1| hypothetical protein LMED105_14163 [Limnobacter sp. MED105] gi|149824913|gb|EDM84127.1| hypothetical protein LMED105_14163 [Limnobacter sp. MED105] Length = 359 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 110/359 (30%), Positives = 180/359 (50%), Gaps = 7/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M E + P+ ++ + +ILV + L F +L A II WP++ + Sbjct: 1 MAEHLRQPKSLISTLFTVLILVGAAIVLSPFLLAILWAGIIATAFWPLHCRIRGRFPGKP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGM 117 A + T+ V L + P++ L + + ++ E+ + + A+ G+ VP WL IP G M Sbjct: 61 NGAAFLTTLVVAFLLVGPMIGLIVFMVQDILEITTFLRQADDSGVAVPDWLPQIPVLGEM 120 Query: 118 WASELWTKHLSHPQSLK-ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + W ++LS P+ + +L ET T + + AS + L ++ F + LFF Sbjct: 121 LVAS-WQEYLSVPKQISGLLRETL--TQRLGDVQGTASAILLELLGRVATLFFALWVLFF 177 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG SIS +++ +G WK +P +R+ G+ I++ E ++L + Sbjct: 178 FYRDGSSISIRMNRIGTDWLGQRWKPYVSHMPPALRAAVNGLVIVSFAEAVILSVLFAAC 237 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GV + V LG ITA++A IP AP + + L + G+ A L G + + I D + Sbjct: 238 GVYAPVLLGTITALIAFIPMAAPGLLAILGMILFLSGHGAEAIVLITVGMLVVLIADYLV 297 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 RP L+ G LPFL FG+ GGV TMG++GL IGPVL+ L+ V + E+ A + + Sbjct: 298 RPLLIQGGTHLPFLAVLFGVFGGVITMGIVGLIIGPVLLVLLVVFFDEASHAHHHDTPE 356 >gi|167578405|ref|ZP_02371279.1| hypothetical protein BthaT_09713 [Burkholderia thailandensis TXDOH] gi|167616545|ref|ZP_02385176.1| hypothetical protein BthaB_09603 [Burkholderia thailandensis Bt4] Length = 356 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 144/276 (52%), Gaps = 15/276 (5%) Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLS---HP 130 +VP+ + + +EL+ + Q GIPVP LS +P G AS W HL+ HP Sbjct: 87 VVPVAAGLVEAIEQSRELLGWLHRVEQTGIPVPDALSHLPFGSQQASAWWQAHLAQPLHP 146 Query: 131 QSLKILSETFLKTNGID--FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S G+D + F FG + + FM++ LF +R G +S L Sbjct: 147 AS---------AVKGVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGAL 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + F + + + + T G+ ++ GEG++LG AY AG+P LG++T Sbjct: 198 LTGVRRAFGDSGAALLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVT 257 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A+ AM+P AP+ F +++L ++G + A L +GA+ +F+ + +RP L+G +LP Sbjct: 258 AVAAMLPFCAPLVFCGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLP 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FL FG++GG T GLLGLF+GP LM ++ V+W E Sbjct: 318 FLLVLFGILGGAETFGLLGLFVGPALMTVLTVLWAE 353 >gi|255319865|ref|ZP_05361070.1| putative membrane protein [Acinetobacter radioresistens SK82] gi|262380394|ref|ZP_06073548.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255303184|gb|EET82396.1| putative membrane protein [Acinetobacter radioresistens SK82] gi|262297840|gb|EEY85755.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 372 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/345 (29%), Positives = 181/345 (52%), Gaps = 17/345 (4%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F ILV L F LK F PVL A II + +WP+Y S + S+ A + V ++ + Sbjct: 16 LFFILVFLGFHVLKYFIVPVLWAAIIAYMTWPLYLSIQRMCGQRSSISASVMIVLIILVI 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 +PL F + E + L ++ G + VP ++ ++P G + + + PQS Sbjct: 76 GIPLTFAIFILQHEGRNLYYELQRQIFSGHVSVPDFIRELPIIGKEVTRTLKELNTDPQS 135 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQL 188 + +++ + +G L+ + + F I++LFFFYRDG +I +Q+ Sbjct: 136 ITQNVAAWIQGH---------LGYGRFVLNEISKNIIKLCFAIMSLFFFYRDGQTILRQV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + E + + + R+ G+ + AI + ++ G +Y +AGVP+ + L + T Sbjct: 187 STAMEKVIGPRIHHYMDTISETTRAVVYGVGLTAIAQAILAGLSYVVAGVPNPMVLTIAT 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A+IP G P+++ +V+++L +G A +F WG + D +RP ++ G ++P Sbjct: 247 FLLALIPFGTPVAYGSVALWLFSQGQTVEAIGVFAWGVCIVSTSDNVIRPLVISGATQIP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FL FG++GGV + GL+GLFIGPV++A+I IW+E + E + Sbjct: 307 FLLIMFGVLGGVASFGLVGLFIGPVILAVILAIWREWLHETTEPE 351 >gi|217969998|ref|YP_002355232.1| hypothetical protein Tmz1t_1578 [Thauera sp. MZ1T] gi|217507325|gb|ACK54336.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 373 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 35/331 (10%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F PV A+II + +W Y S+ T A++ T+ + F++P L++ E+ Sbjct: 33 FIVPVAWAVIIAYATWTPYRQLRSRLPRYPTISALLMTLLLSAAFVLPALWIGMLLRTEV 92 Query: 90 KELVSKVVLANQHGIPV-PRWLSDIPGGMWASE----LWTKHLSHPQSLKILSETFLKTN 144 ++ V + G V P ++ +P W + + + P++L+ +++ Sbjct: 93 GVAIAAVTAQIREGAFVLPEFVRTLP---WIGDDLQAMVGELTREPEALRAQLTEWVRQG 149 Query: 145 G------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS-----LGE 193 I + R A++ G F +I +FF YRDG + +Q+ + LGE Sbjct: 150 SDLALTLIGDVGRNAAKLG-----------FALITVFFLYRDGERVLEQVVAVLRRFLGE 198 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L P Y + + V+ G+ AIG+G V G YW AGVP+ V +G ITA++AM Sbjct: 199 RLDP-YLSAVGGMTKAVV----WGLIATAIGQGFVAGLGYWWAGVPAPVLMGAITAVIAM 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP G P ++ ++ +LL+ GN L LWGA+ + VD +RP ++ ++PFL Sbjct: 254 IPFGTPFAWGSIGAWLLLTGNTVEGIGLLLWGALVVSWVDNLVRPLVISNATRIPFLLVM 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GG+ GL+GLF+GPV++A++ +W E Sbjct: 314 FGVLGGLSAFGLVGLFLGPVVLAVLMAVWGE 344 >gi|134278850|ref|ZP_01765563.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167905924|ref|ZP_02493129.1| hypothetical protein BpseN_27051 [Burkholderia pseudomallei NCTC 13177] gi|134249269|gb|EBA49350.1| putative membrane protein [Burkholderia pseudomallei 305] Length = 356 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY LAG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYALAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|126443267|ref|YP_001062066.1| hypothetical protein BURPS668_A1067 [Burkholderia pseudomallei 668] gi|126222758|gb|ABN86263.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 356 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASTWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|237808109|ref|YP_002892549.1| hypothetical protein Tola_1348 [Tolumonas auensis DSM 9187] gi|237500370|gb|ACQ92963.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 365 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/333 (29%), Positives = 168/333 (50%), Gaps = 33/333 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ F PV A+II + SWP+Y + T A++ T+ V FI+P L++ Sbjct: 30 VQPFIIPVAWAMIIAYASWPLYCLLRQSIKLRPTLSALLMTLLVTTAFILPTLWV----- 84 Query: 87 LEMKELVSKVVLANQH-------GIP-VPRWLSDIPG-GMWASELWTKHLSHPQSLKILS 137 + L +V +A H G P +P ++ +P G W L T+ + P + + Sbjct: 85 --ISLLRDEVGIAYTHFNSRIAEGPPKLPEYIRTLPWLGSWLDGLITQSIGDPAAFQDKI 142 Query: 138 ETFLKTNGIDFIP------RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 T+L+ + R A++ G F +I LFF +RDG I Q+ + Sbjct: 143 STWLQEGSNQLVSVLGDVGRNAAKVG-----------FALITLFFMFRDGEHILTQVHKV 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A V ++ + G+ + A+ +G V G YW + + + LG ITA++ Sbjct: 192 LFRFLGARIDNYLAAVGEMTIAVVWGLILTALAQGFVAGLGYWWLDLSAPMLLGAITALV 251 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +MIP GAP ++ +++++LLI G N L LWGA+ + VD +RP ++ ++PFL Sbjct: 252 SMIPFGAPFAWGSITVFLLIDGQYLNGIILLLWGALAVSSVDNLVRPMVISSATQIPFLL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GG+ GL+GLF+GPV++A++ IW+E Sbjct: 312 VMFGVLGGLAAFGLVGLFMGPVILAVLMAIWQE 344 >gi|167819115|ref|ZP_02450795.1| hypothetical protein Bpse9_28538 [Burkholderia pseudomallei 91] gi|167827496|ref|ZP_02458967.1| hypothetical protein Bpseu9_27695 [Burkholderia pseudomallei 9] gi|226195214|ref|ZP_03790805.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|254189761|ref|ZP_04896270.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254300035|ref|ZP_04967481.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157809903|gb|EDO87073.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157937438|gb|EDO93108.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|225933019|gb|EEH29015.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] Length = 356 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 160/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|257143048|ref|ZP_05591310.1| hypothetical protein BthaA_28058 [Burkholderia thailandensis E264] Length = 356 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 15/276 (5%) Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLS---HP 130 +VP+ + + +EL+ + Q GIP+P LS +P G AS W HL+ HP Sbjct: 87 VVPVAAGLVEAIEQSRELLGWLHRVEQTGIPMPDALSHLPFGSQQASAWWQAHLAQPLHP 146 Query: 131 QSLKILSETFLKTNGID--FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S G+D + F FG + + FM++ LF +R G +S L Sbjct: 147 AS---------AVKGVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGAL 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + F + + + + T G+ ++ GEG++LG AY AG+P LG++T Sbjct: 198 LTGVRRAFGDSGAALLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVT 257 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A+ AM+P AP+ F +++L ++G + A L +GA+ +F+ + +RP L+G +LP Sbjct: 258 AVAAMLPFCAPLVFCGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLP 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FL FG++GG T GLLGLF+GP LM ++ V+W E Sbjct: 318 FLLVLFGILGGAETFGLLGLFVGPALMTVLTVLWAE 353 >gi|167839250|ref|ZP_02465977.1| hypothetical protein Bpse38_21639 [Burkholderia thailandensis MSMB43] Length = 356 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 161/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T +V L +VP+ Sbjct: 35 WVIRDFVPAIAWACVVAIALWPALRRIDALPAFHGRATLVAAALTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + A Q GIP P LS +P G AS W +L+ P + + + Sbjct: 95 VEAVEQSHELLGWLHRAEQTGIPAPDALSHLPFGSQQASAWWQANLAKP----LHPASAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K+ + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KSVDGGSVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGALLTGVRRAFGESGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + R + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ Sbjct: 211 ALLRRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|241761186|ref|ZP_04759275.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374805|gb|EER64266.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 352 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 102/333 (30%), Positives = 168/333 (50%), Gaps = 14/333 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLAVIATVSVMCLF 74 II + L+ ++ F+ ++ +++I WP++ S SK E+ +AT+++ Sbjct: 17 IIGLGLWTIRHFWPALIWSIVIAIAFWPLWLKLKESMGSKHEK--ILAPALATLAIGVTL 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 I+PLLF + M + + + L NQ P P WL IP GG ++ Sbjct: 75 ILPLLFFAFEIMNDFQAAIHFFQDLKNQDTAP-PDWLGRIPFFGGNLVNKWHQFFAPSSD 133 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +I L N I+ + FGM + F +++LFF +R G + + ++ Sbjct: 134 GSQISLHQLLNGNVINH----SRAFGMNVARRITTFFFTLMSLFFLFRSGSELQKMFLNV 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L ++ + V +R T G+ ++ +GEG++LG Y G P V G +TAI Sbjct: 190 SRRLMGPDMERFAHQVVLSVRGTLDGLVLVGLGEGVLLGIIYVFTGTPHAVMFGGMTAIA 249 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP AP+ F V+ L +G+I A + G + L I D +RP L+GG +LPFL Sbjct: 250 AIIPFCAPVMFCIVAAILASQGHIGAAITVVALGMLILMIADHVVRPILIGGATRLPFLW 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G++GG+ T GLLGLF+GP LMA++ +IW++ Sbjct: 310 VLIGILGGIETFGLLGLFLGPALMAVLIMIWRD 342 >gi|260752852|ref|YP_003225745.1| hypothetical protein Za10_0613 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856300|ref|YP_162388.2| hypothetical protein ZMO0653 [Zymomonas mobilis subsp. mobilis ZM4] gi|258552215|gb|ACV75161.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775296|gb|AAV89277.2| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ZM4] Length = 352 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 102/333 (30%), Positives = 168/333 (50%), Gaps = 14/333 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLAVIATVSVMCLF 74 II + L+ ++ F+ ++ +++I WP++ S SK E+ +AT+++ Sbjct: 17 IIGLGLWTIRHFWPALIWSIVIAIAFWPLWLKLKESMGSKHEK--MLAPALATLAIGVTL 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 I+PLLF + M + + + L NQ P P WL IP GG ++ Sbjct: 75 ILPLLFFAFEIMNDFQAAIHFFQDLKNQDTAP-PDWLGRIPFFGGNLVNKWHQFFAPSSD 133 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +I L N I+ + FGM + F +++LFF +R G + + ++ Sbjct: 134 GSQISLHQLLNGNVINH----SRAFGMNVARRITTFFFTLMSLFFLFRSGSELQKMFLNV 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L ++ + V +R T G+ ++ +GEG++LG Y G P V G +TAI Sbjct: 190 SRRLMGPDMERFAHQVVLSVRGTLDGLVLVGLGEGVLLGIIYVFTGTPHAVMFGGMTAIA 249 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP AP+ F V+ L +G+I A + G + L I D +RP L+GG +LPFL Sbjct: 250 AIIPFCAPVMFCIVAAILASQGHIGAAITVVALGMLILMIADHVVRPILIGGATRLPFLW 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G++GG+ T GLLGLF+GP LMA++ +IW++ Sbjct: 310 VLIGILGGIETFGLLGLFLGPALMAVLIMIWRD 342 >gi|83716829|ref|YP_439890.1| hypothetical protein BTH_II1696 [Burkholderia thailandensis E264] gi|83650654|gb|ABC34718.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 391 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 15/276 (5%) Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLS---HP 130 +VP+ + + +EL+ + Q GIP+P LS +P G AS W HL+ HP Sbjct: 122 VVPVAAGLVEAIEQSRELLGWLHRVEQTGIPMPDALSHLPFGSQQASAWWQAHLAQPLHP 181 Query: 131 QSLKILSETFLKTNGID--FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S G+D + F FG + + FM++ LF +R G +S L Sbjct: 182 AS---------AVKGVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGAL 232 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + F + + + + T G+ ++ GEG++LG AY AG+P LG++T Sbjct: 233 LTGVRRAFGDSGAALLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVT 292 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A+ AM+P AP+ F +++L ++G + A L +GA+ +F+ + +RP L+G +LP Sbjct: 293 AVAAMLPFCAPLVFCGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLP 352 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FL FG++GG T GLLGLF+GP LM ++ V+W E Sbjct: 353 FLLVLFGILGGAETFGLLGLFVGPALMTVLTVLWAE 388 >gi|167722951|ref|ZP_02406187.1| hypothetical protein BpseD_28289 [Burkholderia pseudomallei DM98] Length = 356 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYTFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|53721751|ref|YP_110736.1| hypothetical protein BPSS0723 [Burkholderia pseudomallei K96243] gi|76817947|ref|YP_337450.1| hypothetical protein BURPS1710b_A2299 [Burkholderia pseudomallei 1710b] gi|126455713|ref|YP_001075020.1| hypothetical protein BURPS1106A_A0984 [Burkholderia pseudomallei 1106a] gi|167741935|ref|ZP_02414709.1| hypothetical protein Bpse14_27958 [Burkholderia pseudomallei 14] gi|167848970|ref|ZP_02474478.1| hypothetical protein BpseB_27141 [Burkholderia pseudomallei B7210] gi|167914234|ref|ZP_02501325.1| hypothetical protein Bpse112_27347 [Burkholderia pseudomallei 112] gi|217418668|ref|ZP_03450175.1| putative membrane protein [Burkholderia pseudomallei 576] gi|237509212|ref|ZP_04521927.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242312985|ref|ZP_04812002.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254183096|ref|ZP_04889688.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254192859|ref|ZP_04899294.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254262513|ref|ZP_04953378.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|52212165|emb|CAH38183.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76582420|gb|ABA51894.1| putative membrane protein [Burkholderia pseudomallei 1710b] gi|126229481|gb|ABN92894.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|169649613|gb|EDS82306.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184213629|gb|EDU10672.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217397972|gb|EEC37987.1| putative membrane protein [Burkholderia pseudomallei 576] gi|235001417|gb|EEP50841.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242136224|gb|EES22627.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254213515|gb|EET02900.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 356 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|167897573|ref|ZP_02484975.1| hypothetical protein Bpse7_27792 [Burkholderia pseudomallei 7894] gi|167922146|ref|ZP_02509237.1| hypothetical protein BpseBC_26558 [Burkholderia pseudomallei BCC215] Length = 356 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASTWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|53716952|ref|YP_106010.1| hypothetical protein BMAA1401 [Burkholderia mallei ATCC 23344] gi|67643334|ref|ZP_00442081.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121597068|ref|YP_990127.1| hypothetical protein BMASAVP1_0518 [Burkholderia mallei SAVP1] gi|124383193|ref|YP_001023956.1| hypothetical protein BMA10229_0130 [Burkholderia mallei NCTC 10229] gi|126446549|ref|YP_001078668.1| hypothetical protein BMA10247_A1484 [Burkholderia mallei NCTC 10247] gi|167001472|ref|ZP_02267269.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254174598|ref|ZP_04881260.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254200862|ref|ZP_04907227.1| putative membrane protein [Burkholderia mallei FMH] gi|254204829|ref|ZP_04911182.1| putative membrane protein [Burkholderia mallei JHU] gi|254356602|ref|ZP_04972877.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52422922|gb|AAU46492.1| putative membrane protein [Burkholderia mallei ATCC 23344] gi|121224866|gb|ABM48397.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124291213|gb|ABN00483.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126239403|gb|ABO02515.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|147748474|gb|EDK55549.1| putative membrane protein [Burkholderia mallei FMH] gi|147754415|gb|EDK61479.1| putative membrane protein [Burkholderia mallei JHU] gi|148025629|gb|EDK83752.1| putative membrane protein [Burkholderia mallei 2002721280] gi|160695644|gb|EDP85614.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|238524656|gb|EEP88088.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|243062780|gb|EES44966.1| putative membrane protein [Burkholderia mallei PRL-20] Length = 356 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 7/323 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAAVLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWLANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 T GLLGLF+GP LM ++ V+W E Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAE 353 >gi|226953805|ref|ZP_03824269.1| protein of hypothetical function UPF0118 [Acinetobacter sp. ATCC 27244] gi|294651707|ref|ZP_06729009.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226835444|gb|EEH67827.1| protein of hypothetical function UPF0118 [Acinetobacter sp. ATCC 27244] gi|292822426|gb|EFF81327.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 104/348 (29%), Positives = 185/348 (53%), Gaps = 20/348 (5%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVM 71 +F +L+ L F LK F PVL A II + +WP+Y ++ ++ E T A I V+ Sbjct: 17 LFFVLMFLGFNILKYFIVPVLWAAIIAYMTWPVY-LWVQRRFFGENRPTLNATIMISLVI 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPG-GMWASELWTKHLS 128 + VP +F + LE + L + L + H I VP ++ ++P G S + Sbjct: 76 LVIGVPFIFAIFLLQLEGRNLYMNLQKQLFSGH-IQVPDFIRNLPVIGEDISHTINELSG 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-SIIFMIIALFFFYRDGFSISQQ 187 P S+ +++++ + + RF + + L + F ++ LFFFYRDG +I Q Sbjct: 135 DPNSITRSIAEWIQSH-LSY-----GRFVLSEISRNLVKLTFALMTLFFFYRDGQTILAQ 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + E + + + + R+ G+ + A+ + L+ G +Y++AGVP+ + L ++ Sbjct: 189 VSRALEMVIGPRVHHYLQTISETTRAVVYGIGLTAVAQALLAGLSYFVAGVPNPMLLTIV 248 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 T I+A+IP G P+S+ V ++L +G A + WG + + D +RP ++ G ++ Sbjct: 249 TFILALIPFGTPVSYLGVGLWLFAQGQTVEAIGVVTWGVLIVSSADNVIRPLVISGATQI 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + EN E+ Sbjct: 309 PFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWRE---WLHENVEQ 353 >gi|52840967|ref|YP_094766.1| transmembrane permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296757|ref|YP_123126.1| hypothetical protein lpp0796 [Legionella pneumophila str. Paris] gi|52628078|gb|AAU26819.1| transmembrane permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750542|emb|CAH11944.1| hypothetical protein lpp0796 [Legionella pneumophila str. Paris] Length = 350 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/332 (31%), Positives = 175/332 (52%), Gaps = 13/332 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSVMCLFI 75 I++ SLY + F ++ A II ++P+Y+ K +S FL T + LF+ Sbjct: 17 IVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLF---TTLMGLLFL 73 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +PL +L + E + ++ + N+ G P + +IP G + W ++ P ++K Sbjct: 74 IPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPGNIK 133 Query: 135 ILSETFLKTNGIDFIPR--FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 FL + P + + G+ + F ++ LFFFYRDG + Q+ +G Sbjct: 134 ----EFLSNLHVTLTPTSYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQIQHIG 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 E+ W + S +P +R T G ++ IG G+++G Y L G P+ G ITA+ A Sbjct: 190 EYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGVCYALVGFPAPTLTGFITALAA 249 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIP P+ F V++ LL G++ + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 250 MIPFVVPVVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLAV 309 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 310 LFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|238025108|ref|YP_002909340.1| hypothetical protein bglu_2g17670 [Burkholderia glumae BGR1] gi|237879773|gb|ACR32105.1| Hypothetical protein bglu_2g17670 [Burkholderia glumae BGR1] Length = 356 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/336 (30%), Positives = 177/336 (52%), Gaps = 12/336 (3%) Query: 16 IMFIILVSL--YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVM 71 +++ +LV+L + ++ F + A +I WP + + T +A++ T +V Sbjct: 23 VLYTVLVALALWIIRAFLPAIAWAGVIAIALWPALRRIDAIRWLSGRRTLVAILLTSAVG 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHP 130 L + P+ ++ ++ + V A +GIP+P + +P G + W +L+ P Sbjct: 83 LLLVAPVAIAVAQAAGQIHDVFAWVHDARANGIPLPDAVYHLPFGSRQVAAWWQANLAQP 142 Query: 131 QSLKILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +K NG F+ + FG L + FM++ LF +R G +S+ L Sbjct: 143 ----LHAPAGVKGMNGEAFV-SYGKAFGSHVLHAAVLFGFMLVTLFVIFRAGPRMSESLM 197 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + F A +++ + + T G+ ++ +GEG +LG AY +AGV LG++TA Sbjct: 198 RGVQRAFGANGASLTQRMVSAVYGTVTGLVVVGLGEGALLGVAYAVAGVSHAALLGLVTA 257 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + AM+P AP+ F +++L L+KG A L ++GA+ +F+ + +RP L+GG +LP Sbjct: 258 VAAMLPFCAPVVFCGAALWLFLVKGAAAWAIGLAVFGAVVVFVAEHFVRPVLIGGSARLP 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FL FG++GG T GLLGLFIGP LM ++ V+W E Sbjct: 318 FLLVLFGILGGAETFGLLGLFIGPALMTVLTVLWSE 353 >gi|50086276|ref|YP_047786.1| hypothetical protein ACIAD3289 [Acinetobacter sp. ADP1] gi|49532252|emb|CAG69964.1| conserved hypothetical protein; putative membrane protein [Acinetobacter sp. ADP1] Length = 370 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 172/320 (53%), Gaps = 8/320 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI-VPLLFLFYYGM 86 K F PV+ A II + +WPIY E+ L+ +S++ L I +PL F + Sbjct: 29 KYFIVPVVWAAIIAYMTWPIYIGIQRFCGENRPNLSATLMISLIILVIGIPLTFAVFMLQ 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTN 144 E + L ++ G + P ++ ++P G + + + ++P +L +++++ Sbjct: 89 HEGRNLFIELQQQIFSGHLSAPDFIRELPLVGNEITRILNEINTNPSNLTQNLSLWIQSH 148 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + S + C F +++LFFFYRDG +I Q+ E + Sbjct: 149 -MGYGRFVLSEISKNLVKLC----FALLSLFFFYRDGHTILNQVSKALEMVIGPRIHHYM 203 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + R+ G+ + A+ + ++ G +Y++AGVP+ + L ++T ++A+IP G P+++T+ Sbjct: 204 DTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNPMVLTIVTFLLALIPFGTPLAYTS 263 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+++L +G + A + LWG + D +RP ++ G ++PFL FG++GG+ + G Sbjct: 264 VALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVISGATQIPFLLIMFGVLGGLASFG 323 Query: 325 LLGLFIGPVLMALIAVIWKE 344 L+GLFIGPV++A++ IW+E Sbjct: 324 LVGLFIGPVILAILLAIWRE 343 >gi|296106318|ref|YP_003618018.1| transmembrane permease [Legionella pneumophila 2300/99 Alcoy] gi|295648219|gb|ADG24066.1| transmembrane permease [Legionella pneumophila 2300/99 Alcoy] Length = 283 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 149/275 (54%), Gaps = 7/275 (2%) Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 LF++PL +L + E + ++ + N+ G P + +IP G + W ++ P Sbjct: 4 LFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPG 63 Query: 132 SLKILSETFLKTNGIDFIPR--FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S+K FL + P + + G+ + F ++ LFFFYRDG + Q+ Sbjct: 64 SIK----EFLSNLHVTLTPTSYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQIQ 119 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G ITA Sbjct: 120 HIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFITA 179 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+LPF Sbjct: 180 LAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPF 239 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 240 LAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 274 >gi|193078525|gb|ABO13539.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] Length = 372 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 174/339 (51%), Gaps = 22/339 (6%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F IL+ L F LK F PVL A II + +WPIY E+ L +S++ L Sbjct: 16 LFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVMISLVILI 75 Query: 75 I-VPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + VP + E + L + + V + + VP ++ ++P G S + + Sbjct: 76 VGVPFTCAIFILQHEGRNLYFDLQRQVFSGH--LSVPDFIRNLPFIGKEISRTLNEINTD 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSIS 185 P S +L+++ +G + L+ + + F I++LFFFYRDG +I Sbjct: 134 PNSTIQNIAAWLQSH---------LSYGRVLLNEISKNIVKLCFAILSLFFFYRDGHTIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G P+S+ V ++L +G A + LWG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 QIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWRE 343 >gi|295699388|ref|YP_003607281.1| hypothetical protein BC1002_3752 [Burkholderia sp. CCGE1002] gi|295438601|gb|ADG17770.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 103/333 (30%), Positives = 177/333 (53%), Gaps = 15/333 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 ++L++L+ ++ F V A ++ WP+ S +T LA + T+ + L ++ Sbjct: 37 LVLLALWVVRDFIVVVAWAAVVAIALWPLLHKVASSPWFRGRTTLLATVFTLVIAVLVLL 96 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHP----Q 131 P+ + E +L A ++GIP+P +++ +P G+ S W +L+ P Sbjct: 97 PVGLGLAQALREAHDLNDWFRSAQENGIPLPDFINRLPFGVQQISSWWQANLAQPLRGSA 156 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++K L + T G F R A+ M+F FM++ LF ++ G +S L Sbjct: 157 AMKGLHSETVMTLGRHFGAR-AAHAAMVF-------AFMLVTLFVIFQAGPRLSGSLLKA 208 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F + + +R T G+ ++ +GEGL+LG AY++ GVP LG +TAI Sbjct: 209 ARRGFGDSGADLVAHMGTAVRGTVSGLIVVGVGEGLLLGVAYFVTGVPHAALLGFVTAIA 268 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 AM+P API F +++LL++G++ A L ++GA+ +F+ + +RP L+G +LPFL Sbjct: 269 AMLPFCAPIVFGLAALWLLVQGSMVAAAGLLVFGAVVVFVAEHFVRPVLIGNSTRLPFLL 328 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GG T GLLG+FIGP LM ++ V+W + Sbjct: 329 VLFGILGGAETFGLLGIFIGPALMTVLMVLWTD 361 >gi|186472140|ref|YP_001859482.1| hypothetical protein Bphy_3280 [Burkholderia phymatum STM815] gi|184194472|gb|ACC72436.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 361 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 166/332 (50%), Gaps = 8/332 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 +++++L+ ++ F + A +I WP + K + ST +A + T+++ LF++ Sbjct: 32 MVVLALWVIRDFVPAIAWACVIAIALWPAFHRIEEHKFFKGRSTLIATVLTIAIGLLFLL 91 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKI 135 P+ E +++ ++GIPVP ++ +P G W +LS P + Sbjct: 92 PVGIGIAQAASEAHDVIEWARGVQENGIPVPDFVQHLPFGAAQIGSWWQDNLSQP----L 147 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +K + F FG + FM++ LF ++ G +S +L Sbjct: 148 RDSPAMKGLHGGAVVTFGRHFGARAAHALMLFAFMLVTLFVIFQAGPKLSCELMKGVRRA 207 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + +R T G+ ++ IGEG +L AY L GVP LG +TAI AM+P Sbjct: 208 FGYDGMHLFERMAAAVRGTVSGLVVVGIGEGALLLVAYMLTGVPHAALLGFVTAIAAMLP 267 Query: 256 GGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 AP+ F ++++ + +G + A L ++G + +F+ + +RP L+G +LPFL F Sbjct: 268 FCAPVVFCGAALWIFVEQGALIPAIGLAVFGFVVVFVAEHFVRPVLIGSSARLPFLLVLF 327 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG T GLLGLF+GP LM ++ V+W E I Sbjct: 328 GILGGAETFGLLGLFVGPALMTVLMVLWTEWI 359 >gi|169632288|ref|YP_001706024.1| hypothetical protein ABSDF0345 [Acinetobacter baumannii SDF] gi|169794531|ref|YP_001712324.1| hypothetical protein ABAYE0342 [Acinetobacter baumannii AYE] gi|184159661|ref|YP_001848000.1| permease [Acinetobacter baumannii ACICU] gi|213158897|ref|YP_002320895.1| hypothetical protein AB57_3597 [Acinetobacter baumannii AB0057] gi|215482119|ref|YP_002324301.1| hypothetical protein ABBFA_000368 [Acinetobacter baumannii AB307-0294] gi|239501916|ref|ZP_04661226.1| hypothetical protein AbauAB_06345 [Acinetobacter baumannii AB900] gi|260556965|ref|ZP_05829182.1| permease [Acinetobacter baumannii ATCC 19606] gi|294837967|ref|ZP_06782650.1| hypothetical protein A60131_08510 [Acinetobacter sp. 6013113] gi|294843277|ref|ZP_06787960.1| hypothetical protein A6014_15504 [Acinetobacter sp. 6014059] gi|294858709|ref|ZP_06796478.1| hypothetical protein A6013_08961 [Acinetobacter sp. 6013150] gi|301344848|ref|ZP_07225589.1| hypothetical protein AbauAB0_01365 [Acinetobacter baumannii AB056] gi|301513299|ref|ZP_07238536.1| hypothetical protein AbauAB05_17001 [Acinetobacter baumannii AB058] gi|301597602|ref|ZP_07242610.1| hypothetical protein AbauAB059_17343 [Acinetobacter baumannii AB059] gi|169147458|emb|CAM85319.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|169151080|emb|CAO99739.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] gi|183211255|gb|ACC58653.1| predicted permease [Acinetobacter baumannii ACICU] gi|213058057|gb|ACJ42959.1| hypothetical protein AB57_3597 [Acinetobacter baumannii AB0057] gi|213986092|gb|ACJ56391.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260409571|gb|EEX02872.1| permease [Acinetobacter baumannii ATCC 19606] gi|322509572|gb|ADX05026.1| permease [Acinetobacter baumannii 1656-2] gi|323519592|gb|ADX93973.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 372 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/339 (28%), Positives = 174/339 (51%), Gaps = 22/339 (6%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F IL+ L F LK F PVL A II + +WPIY E+ L +S++ L Sbjct: 16 LFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVMISLVILI 75 Query: 75 I-VPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + VP + E + L + + V + + VP ++ ++P G S + + Sbjct: 76 VGVPFTCAIFILQHEGRNLYFDLQRQVFSGH--LSVPDFIRNLPFIGKEISRTLNEINTD 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSIS 185 P S +++++ +G + L+ + + F I++LFFFYRDG +I Sbjct: 134 PNSTIQNIAAWVQSH---------LSYGRVLLNEISKNIVKLCFAILSLFFFYRDGHTIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G P+S+ V ++L +G A + LWG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 QIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWRE 343 >gi|307727746|ref|YP_003910959.1| hypothetical protein BC1003_5755 [Burkholderia sp. CCGE1003] gi|307588271|gb|ADN61668.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 369 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 177/338 (52%), Gaps = 25/338 (7%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA-------VIATVSVM 71 ++L++L+ ++ F V A ++ WP+ +K E S +L+ T+++ Sbjct: 42 LVLLALWVVRDFLPVVGWAGVLAIALWPLL-----RKVEGSRWLSGRTTLIAAALTLAIA 96 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW-TKHLSHP 130 L ++P+ + E +L A ++GI +P ++ +P G+ +E W +L+ P Sbjct: 97 LLVVLPVGVGIAQALREAHDLSEWFKAAQENGIAMPDFIHRLPFGVQQAEAWWQAYLAPP 156 Query: 131 ----QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++K L T + T G FG + FM++ LF ++ G +S Sbjct: 157 LRDSAAMKGLHSTTVVTLG--------RHFGARAVHAVTVFAFMLVTLFVIFQAGPRLSG 208 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + F ++ + + +R T G+ ++ +GEG +LG AY++ G+P L + Sbjct: 209 ALARGLQRGFGEDGAQLVQRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHVALLAL 268 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 IT+I AM+P API+F+ +++L +G++ A L ++G+I +F+ + +RP L+G + Sbjct: 269 ITSIAAMLPFCAPITFSLAALWLFSQGSVAGAIGLLVFGSIVVFVAEHFVRPVLIGNSTR 328 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LPFL FG++GG T GLLGLFIGP LM ++ V+W + Sbjct: 329 LPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTD 366 >gi|325123669|gb|ADY83192.1| hypothetical protein BDGL_002606 [Acinetobacter calcoaceticus PHEA-2] Length = 372 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 172/339 (50%), Gaps = 22/339 (6%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F IL+ L F LK F PVL A II + +WPIY ES L +S++ L Sbjct: 16 LFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGESRNTLNATLMISLVILV 75 Query: 75 I-VPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + +P + E + L + + V + + VP ++ D+P G S + + Sbjct: 76 VGIPFTCAVFILQHEGRNLYFDLQRQVFSGH--LSVPDFIRDLPFVGKEISRTLNELNND 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSIS 185 P S +++++ +G + L + + F + +LFFFYRDG I Sbjct: 134 PNSTIQNIAAWVQSH---------LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQMIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 SQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T ++A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IVTFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWRE 343 >gi|293610761|ref|ZP_06693061.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827105|gb|EFF85470.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 372 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 172/339 (50%), Gaps = 22/339 (6%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F IL+ L F LK F PVL A II + +WPIY ES L +S++ L Sbjct: 16 LFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGESRNTLNATLMISLVILV 75 Query: 75 I-VPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + +P + E + L + + V + + VP ++ D+P G S + + Sbjct: 76 VGIPFTCAVFILQHEGRNLYFDLQRQVFSGH--LSVPDFIRDLPFVGKEISRTLNELNND 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSIS 185 P S +++++ +G + L + + F + +LFFFYRDG I Sbjct: 134 PNSTIQNIAAWVQSH---------LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQMIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 SQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T ++A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IVTFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWRE 343 >gi|53803180|ref|YP_115110.1| hypothetical protein MCA2709 [Methylococcus capsulatus str. Bath] gi|53756941|gb|AAU91232.1| conserved hypothetical integral membrane protein [Methylococcus capsulatus str. Bath] Length = 362 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 166/334 (49%), Gaps = 22/334 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ F + A+ + + +WP+++ + E T A++ T + + + PL++L Sbjct: 25 VRPFLVSIGWAVFVSYVAWPLHAWSQRRFEGRKTLSALVTTALLGSVVLAPLIWLAVLLQ 84 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ EL+ + + +P ++S IP L+ + + F +G+ Sbjct: 85 GEVSELIRSLPDWLEQKPRLPDFVSHIP-------------YFGNELQAVVDQFEDLHGL 131 Query: 147 --DFIPRFASRFG------MIFLDYCLSIIFMII-ALFFFYRDGFSISQQLDSLGEHLFP 197 P + R G M L +++FM + LFF +RDG ++ + + + Sbjct: 132 LKRHAPEWVRRLGSPVLGIMTTLVQNAAVLFMTLFTLFFLFRDGLQLATDVRRVFTRVLG 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K + +++ G+ + A+ +G + G YW+ GV + + LG+ T ++AMIP G Sbjct: 192 ERLKGYFATIEATVKAVLYGIVLTALAQGFLAGLGYWIVGVKAPIVLGIATTLIAMIPFG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ +VSI+LL++G + L LWG + + +D +RP ++ +PF+ FG++ Sbjct: 252 TPFAWGSVSIWLLLQGETWAGVSLALWGTLVISWIDNIIRPLVISSATHIPFVLVMFGVL 311 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GG+ + G +GL +GPV++A+ +W+E + ++E Sbjct: 312 GGLASFGFIGLVLGPVILAMALAVWREWLQQVRE 345 >gi|91778406|ref|YP_553614.1| hypothetical protein Bxe_B1702 [Burkholderia xenovorans LB400] gi|91691066|gb|ABE34264.1| putative membrane protein [Burkholderia xenovorans LB400] Length = 360 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIV 76 ++L++L+ ++ F A V A +I WP+ + +T +A + T+ + L ++ Sbjct: 33 LVLLALWVVRDFIAVVAWAGVIAIALWPLLRKVEGNRWFTGRTTLIAAVLTLLIALLVVL 92 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKI 135 P+ + E +L ++GIP+P ++ +P G+ S W +L+ P + Sbjct: 93 PVGIGIAQALREAHDLNEWFKTVQENGIPLPDFVQHLPFGVQQISTWWQANLTQP----L 148 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +K + FG + FM++ LF ++ G +S L Sbjct: 149 RESAAMKGLHSPAVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQAGPRLSGALLKGMRRG 208 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F ++ + + +R T G+ ++ +GEG +LG AY++ G+P L +TAI AM+P Sbjct: 209 FGDDGAQLLQRMAAAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHVALLAFVTAIAAMLP 268 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 AP++F +++LL +G++ A L ++GA+ +F+ + +RP L+G +LPFL FG Sbjct: 269 FCAPLTFGIAALWLLSQGSVAAAIGLAVFGAVVVFVAEHFVRPVLIGNSTRLPFLLVLFG 328 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++GG T GLLG+FIGP LM ++ V+W + Sbjct: 329 ILGGAETFGLLGIFIGPALMTVLMVLWTD 357 >gi|167565423|ref|ZP_02358339.1| hypothetical protein BoklE_22909 [Burkholderia oklahomensis EO147] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + EL+ + A Q GIP P L+ +P G AS W +L+ P + E +K Sbjct: 100 QSHELLGWLHRAEQTGIPAPDALAHLPFGSQQASAWWHAYLAKP----LHPEAAVKGVDG 155 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F FG + FM++ LF ++ G +S L + F + + Sbjct: 156 GAVVTFGRHFGSRIAHAAVLFGFMLVTLFVIFQAGPRLSGALLTGVRRAFGDNGAALLQR 215 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F + Sbjct: 216 MAAAVYGTVTGLVVVGFGEGVLLGVAYAFAGLPHAALLGLVTAIAAMLPFCAPLVFCGAA 275 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 ++L ++G + A L +G + +F+ + +RP L+G +LPFL FG++GG T GLL Sbjct: 276 LWLFVQGAVGWAIGLAAFGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAETFGLL 335 Query: 327 GLFIGPVLMALIAVIWKE 344 GLFIGP LM ++ V+W E Sbjct: 336 GLFIGPALMTVLTVLWVE 353 >gi|93005128|ref|YP_579565.1| hypothetical protein Pcryo_0297 [Psychrobacter cryohalolentis K5] gi|92392806|gb|ABE74081.1| protein of unknown function UPF0118 [Psychrobacter cryohalolentis K5] Length = 379 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 169/332 (50%), Gaps = 21/332 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P L A I+ + ++PIY+ F + SS F A I TVS+ + VPL+ + E Sbjct: 34 FIVPALWAAILAYVTFPIYNFFHQRVRFSSNFSAAIMTVSITLMIGVPLVAGIFILQQEA 93 Query: 90 KELVSKVVLANQHG-IPVPRWLSDIP--GGMWASELWTKHLSHPQ----SLKILSETFLK 142 L+S +V + G + VP + D+P G LW + +P+ + ++ ++ L Sbjct: 94 LSLISNLVYRIKVGYLDVPDSVKDLPIIGQQVKDVLWRIN-KNPEGTLEAFRLWVQSHLY 152 Query: 143 TNGIDFIPRFAS--RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I F F+S + GM ++ LFFFYRDG S+ +Q+ ++ Sbjct: 153 YGKIAFDVVFSSLAKLGM-----------ALMTLFFFYRDGTSLVRQIRQALRNIIGNRI 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V R+ G+ + A+ + L+ G Y+ A PS + + ++T I+A+IP G P Sbjct: 202 DGYIDSVGTTTRAVVYGIGLTALAQALLAGIGYYFASAPSPILMTIVTFIIALIPFGTPF 261 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + VS++LL +G+ L LWG + + VD +RP ++ G K+PF+ F G++GG+ Sbjct: 262 VWGGVSLWLLSQGHTVEGIGLALWGILVISWVDNLIRPIVISGATKIPFIIIFIGVLGGL 321 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GLFIGPV++A+ +W+E I K + Sbjct: 322 TAFGFVGLFIGPVVLAIGLAVWREWISQHKND 353 >gi|254563916|ref|YP_003071011.1| hypothetical protein METDI5602 [Methylobacterium extorquens DM4] gi|254271194|emb|CAX27206.1| Conserved hypothetical protein, putative inner membrane protein, putative permease [Methylobacterium extorquens DM4] Length = 359 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 167/330 (50%), Gaps = 7/330 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 Y L GF ++ A+++ WP+ + + + + T V + ++P+ L Sbjct: 32 YILSGFLRALVWAVVLAIALWPLLNRAHRRFPPGRHNILWPAVFTGLVALVLLLPIGVLA 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSETFL 141 E +L++ A ++GIPVP +++ +P G A +E W HL+H LSE Sbjct: 92 VEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSERLN 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ D G + + F ++ALFF +R+G ++ Q LF + Sbjct: 152 TTSNRDLT----RSLGAGLVHRVVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRGE 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP++ Sbjct: 208 RVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPLA 267 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F + LL G A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 268 FGLAAALLLAGGAAVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGVE 327 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 T GLLGLF+GP +MA + ++W+E +E Sbjct: 328 TFGLLGLFVGPAVMAALILLWREFTEGSQE 357 >gi|260549903|ref|ZP_05824119.1| permease [Acinetobacter sp. RUH2624] gi|260407153|gb|EEX00630.1| permease [Acinetobacter sp. RUH2624] Length = 372 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 166/339 (48%), Gaps = 44/339 (12%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI-VPLLFLFYYG 85 LK F PV+ A II + +WPIY E+ L +S + L + VPL+ + Sbjct: 28 LKYFIVPVVWAAIIAYMTWPIYLRIQRFFGENRNNLNATVMISFVILVVGVPLICAIFIL 87 Query: 86 MLEMKEL---VSKVVLANQHGIP------------VPRWLSDI---PGGMWAS-ELWTK- 125 E + L + + V + +P + R L+DI P S W + Sbjct: 88 QHEGRNLYLDLQRQVFSGHLSVPDFIKNLPFIGKEITRTLNDINTDPNSTIQSIAAWIQS 147 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HLS+ + L I+ I + + G F I++LFFFYRDG +I Sbjct: 148 HLSYGRVL------------INEISKNLVKLG-----------FAILSLFFFYRDGHTIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGLRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G P+S+ V ++L +G A + LWG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVVLWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 QIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWRE 343 >gi|58038598|ref|YP_190562.1| putative permease [Gluconobacter oxydans 621H] gi|58001012|gb|AAW59906.1| Putative permease [Gluconobacter oxydans 621H] Length = 374 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 167/329 (50%), Gaps = 6/329 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +F + + LY LKGF +L + + WP+Y + S +L ++ T++V +F Sbjct: 32 LALFFVAIGLYTLKGFLPALLWGCVFAISIWPLYRR-TELRFGRSDWLPMVFTLAVALIF 90 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 +VP+ + E + + + +GIP+P W+ +P A+ W H++ PQ L Sbjct: 91 LVPVSLVGVKVADEARSALEWIDDVRNNGIPMPEWVPHLPFLSAQATNWWQNHMTSPQRL 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + +G+ + S+ F ++ LFF +DG S+ ++ + Sbjct: 151 SHLLHSVDVGHGMQMTKQVGSQLA----RRGTLFAFSLLTLFFLLKDGDSVIRKCLLGSQ 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 LF + +++ + + T G+ ++ +GEG ++G Y G P + ++TA+ AM Sbjct: 207 RLFGEQGESLAKQMISSVHGTLAGLVLVGLGEGAIMGIVYMATGAPQPLLFAMVTAVAAM 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP A + V++ LL K ++ A + G++ +FI D +RP L+GG K+PFL Sbjct: 267 IPFLAWPTVGLVALLLLAKSSMIGAIVVSAVGSVVIFIADHFIRPALIGGSTKMPFLWVL 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G++GG T GLLGLF+GP +MA + ++W Sbjct: 327 LGILGGAETWGLLGLFLGPAIMAALHLLW 355 >gi|330821380|ref|YP_004350242.1| hypothetical protein bgla_2g22990 [Burkholderia gladioli BSR3] gi|327373375|gb|AEA64730.1| hypothetical protein bgla_2g22990 [Burkholderia gladioli BSR3] Length = 356 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 137/250 (54%), Gaps = 6/250 (2%) Query: 99 ANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 A +GIPVP +S +P G S W +L+ P + + T +K + + FG Sbjct: 110 ARLNGIPVPDAVSHLPFGAQQVSTWWQANLAQP----LHAPTGVKAMNSEAFVSYGKAFG 165 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + + FM++ LF +R G +IS L + F A + + + I T G Sbjct: 166 SRVVHAAVLFGFMLVTLFVIFRAGPNISASLMRGVQRAFGANGASLIQRMASAIYGTVTG 225 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIF 276 + ++ +GEG +LG AY AGVP LG++TA+ AM+P API F +I+L L++G Sbjct: 226 LVVVGLGEGALLGIAYAFAGVPHAALLGLVTAVAAMLPFCAPIVFCGAAIWLFLVQGATG 285 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A L ++G + +F+ + +RP L+GG +LPFL FG++GG T GLLGLFIGP LM Sbjct: 286 WAIGLAVFGFVVVFVAEHFVRPVLIGGSARLPFLLVLFGILGGAETFGLLGLFIGPALMT 345 Query: 337 LIAVIWKESI 346 ++ V+W E I Sbjct: 346 VLTVLWTEWI 355 >gi|296112637|ref|YP_003626575.1| hypothetical protein MCR_0410 [Moraxella catarrhalis RH4] gi|295920331|gb|ADG60682.1| conserved hypothetical protein [Moraxella catarrhalis RH4] gi|326560897|gb|EGE11262.1| hypothetical protein E9G_03549 [Moraxella catarrhalis 7169] gi|326563867|gb|EGE14118.1| hypothetical protein E9M_02983 [Moraxella catarrhalis 46P47B1] gi|326566876|gb|EGE17015.1| hypothetical protein E9K_01168 [Moraxella catarrhalis 103P14B1] gi|326569796|gb|EGE19846.1| hypothetical protein E9U_05771 [Moraxella catarrhalis BC8] gi|326571292|gb|EGE21314.1| hypothetical protein E9Q_00168 [Moraxella catarrhalis BC1] gi|326571600|gb|EGE21615.1| hypothetical protein E9S_03234 [Moraxella catarrhalis BC7] gi|326575122|gb|EGE25050.1| hypothetical protein E9W_03963 [Moraxella catarrhalis CO72] gi|326576792|gb|EGE26699.1| hypothetical protein E9Y_02270 [Moraxella catarrhalis 101P30B1] gi|326577531|gb|EGE27408.1| hypothetical protein EA1_02057 [Moraxella catarrhalis O35E] Length = 390 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 168/338 (49%), Gaps = 22/338 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P L A I+ + ++PIY+ F +K S +F A + T + + VPL+ +Y E+ Sbjct: 34 FIVPALWAGILAYVTFPIYTFFHTKVRLSPSFSAFLMTFCISLMIGVPLIVGVFYLQHEV 93 Query: 90 KELVSKVVLANQHG-IPVPRWLSDIP--GGMWASELWTKHLSHPQSLK-----ILSETFL 141 V V+ Q G + +P + D+P G LW + + +++ + S + Sbjct: 94 LSFVGMVIRRLQAGYLDLPSQIKDLPVIGQTIKDTLWEINKNPETTMEAVRAWVQSHLYY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 D + + ++ GM ++ LFFFYRDG S+ +Q+ ++ Sbjct: 154 GKMAFDAVLKNLAKLGM-----------ALMTLFFFYRDGKSLVRQIRQAMRNIIGDRID 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 V ++ G+ + A+ + ++ G Y P+ + L +IT ++A+IP G P + Sbjct: 203 DYIDSVGATTQAVVYGIGLTALAQAILAGMGYAFTNAPNPILLTLITFVVALIPFGTPFA 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+++LL +G+ L LWG + + VD +RP ++ G K+PF+ F G++GG+ Sbjct: 263 WGGVAVWLLSQGHTTEGIGLGLWGILVISWVDNLIRPIVISGATKIPFIIIFIGVLGGLT 322 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GLFIGPV++A+ +W+E I ++K +I N Sbjct: 323 AFGFVGLFIGPVVLAIGLAVWRE---WISQHKNEIFIN 357 >gi|262280291|ref|ZP_06058075.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262258069|gb|EEY76803.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 372 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 170/339 (50%), Gaps = 22/339 (6%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F IL+ L F LK F PVL A II + +WPIY E+ L +S++ L Sbjct: 16 LFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGETRNTLNATLMISLVILV 75 Query: 75 I-VPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + +P + E + L + + V + + VP ++ D+P G S + + Sbjct: 76 VGIPFTCAIFILQHEGRNLYFDLQRQVFSGH--LSVPDFIRDLPFVGKEISRTLNELNND 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSIS 185 P S +++++ +G + L + + F + +LFFFYRDG I Sbjct: 134 PNSTIQNIAAWVQSH---------LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQLIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + + G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAFLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T I+A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IATFILALIPFGTPISYLGVGLWLFSQGQTMEAIGVIVWGILIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWRE 343 >gi|71064848|ref|YP_263575.1| hypothetical protein Psyc_0271 [Psychrobacter arcticus 273-4] gi|71037833|gb|AAZ18141.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 379 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 104/356 (29%), Positives = 180/356 (50%), Gaps = 26/356 (7%) Query: 11 IMRWMIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 I++ ++ +LV L+ L + F P L I+ + ++PIY+ F + SS F A I Sbjct: 10 IIQRLLAITLLVVLFVLCFQVVRFFIVPALWGAILAYVTFPIYNFFHQRVRFSSNFSATI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP--GGMWASEL 122 TVS+ + VPL+ + E L+S +V + G + VP + D+P G L Sbjct: 70 MTVSITLMIGVPLVAGIFILQQEALSLISNLVYRIKAGYLDVPDSVKDLPVIGQQVKDVL 129 Query: 123 WTKHLSHP----QSLKILSETFLKTNGIDFIPRFAS--RFGMIFLDYCLSIIFMIIALFF 176 W + +P ++ ++ ++ L I F F+S + GM ++ LFF Sbjct: 130 WRVN-KNPAGTLETFRLWVQSHLYYGKIAFDVVFSSLAKLGM-----------ALMTLFF 177 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG S+ +Q+ ++ V R+ G+ + A+ + L+ G Y+ A Sbjct: 178 FYRDGTSLVRQIRQALRNIIGNRIDGYIDSVGTTTRAVVYGIGLTALAQALLAGIGYYFA 237 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 PS + + ++T I+A+IP G P + ++S++LL +G+ L LWG + + VD + Sbjct: 238 SAPSPILMTILTFIIALIPFGTPFVWGSISLFLLSQGHTVEGIGLALWGILVISWVDNLI 297 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 RP ++ G K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I K Sbjct: 298 RPIVISGATKIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIGLAVWREWISQHKNE 353 >gi|307821972|ref|ZP_07652204.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307736538|gb|EFO07383.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 381 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 174/332 (52%), Gaps = 7/332 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKE--ESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F A ++ A+++ T+WPIY ++ E T+ A++ T+ + L +VPL + Sbjct: 19 WVLHSFLALLVWAVVLAITTWPIYQRLLASNEIHGKVTWGALLLTLLIGALILVPLGYGL 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 + E + L + A GIP P WL IP G WA + W L +P +++ L Sbjct: 79 SRLLNEAQSLGQILTEAQNVGIPPPVWLETIPMIGNWAKDTWMNALGNP----VVANESL 134 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G + F L + ++ LFF Y+ G +SQ + + LF Sbjct: 135 HWLGTGSAITYTKDFASQLLHRFFGFLLTLLVLFFVYQHGTGLSQYVLATNRKLFGETGV 194 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + +R+T G+ ++ +GEGL+LG Y LAG+ LG +T + AMIP A + Sbjct: 195 RYAIHATAAVRATVNGLVLVGLGEGLLLGVGYALAGLSHPAMLGALTGVFAMIPFAAKLI 254 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F A S+ L+ +G++ + LF++G + + + D +RP L+GG +KLPF+ T G+ GG+ Sbjct: 255 FGACSLVLIAEGHMAAGSSLFVFGVVVILLADNYVRPRLIGGAVKLPFIWTLLGIFGGLE 314 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLGLF+GP LMA++ IW++ + + + K Sbjct: 315 NFGLLGLFLGPTLMAVLISIWRDWVADMDKPK 346 >gi|307822136|ref|ZP_07652368.1| calcium-translocating P-type ATPase, PMCA-type [Methylobacter tundripaludum SV96] gi|307736702|gb|EFO07547.1| calcium-translocating P-type ATPase, PMCA-type [Methylobacter tundripaludum SV96] Length = 1256 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 169/342 (49%), Gaps = 30/342 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ F + ALII + WP Y + + +T A +VM I +LFL Y + Sbjct: 30 LREFLLTLAWALIIAYVVWPPYRYLRQQLKGDATLSA-----AVMTTIIAAVLFLTVYWL 84 Query: 87 LEM---------KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + M + LVS Q+ +P ++S IP ++ W + L+ ++ I Sbjct: 85 VAMLQDELKTAYQTLVSDF---GQNTYRLPDFISRIPWLGSTAQEWLERLTDDRAAVI-- 139 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 D+ +++ F FL Y + + +++ +FF +RDG +QL Sbjct: 140 -----AQFADWAQQWSGEFAK-FLGGIGRYIMKLGVILVTVFFCFRDGDEAVRQLHQGLV 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 Y R+ G+ + A+G+G++ G Y +AGV + V LG +TA++A+ Sbjct: 194 RFLGKYQDVYLEAAGHTTRAVVYGLVLAALGQGMLAGLGYAVAGVQAPVLLGAVTALLAL 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P GA + + V I L++ + L LWG + + VD +RP ++ G ++PFL Sbjct: 254 VPMGATLVWMPVGIVLVLTEQTWQGIGLLLWGFLVVSTVDNVIRPLVISGAGRIPFLVVL 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 FG++GG+ G +GLF+GPV++A++ +W ++ + +++++E+ Sbjct: 314 FGVLGGLSAFGAIGLFLGPVILAVLLSVW-QAWLKLQQHEEQ 354 >gi|148654006|ref|YP_001281099.1| hypothetical protein PsycPRwf_2209 [Psychrobacter sp. PRwf-1] gi|148573090|gb|ABQ95149.1| protein of unknown function UPF0118 [Psychrobacter sp. PRwf-1] Length = 409 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 166/324 (51%), Gaps = 17/324 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P L A I+ + ++PIY+ F K + S A I TVS+ + VP++ + E Sbjct: 34 FIVPALWAAILAYVTFPIYNFFHKKVKLSPNISAGIMTVSISLMLGVPIVLGLFVLQQEA 93 Query: 90 KELVSKVVLANQHG-IPVPRWLSDIP--GGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L S ++ + G + VP+ + ++P G LW + SL +L+++ Sbjct: 94 VNLYSNLLYRIKVGYVDVPQEIKNLPVIGQQIKDILWEINKDPEASLSAF-RAWLQSH-- 150 Query: 147 DFIPRFASRFGMIFLDYCLSII----FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +G + LD S + ++ +FFFYRDG S+ +Q+ ++ Sbjct: 151 -------LYYGKVALDVAFSTMAKLGMALMTIFFFYRDGISLIKQIRQALRNIIGNRIDD 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 V ++ G+ + A+ + L+ G Y+ AG PS + L ++T ++A++P G P ++ Sbjct: 204 YLDSVGSTTQAVVYGIGLTALAQALLAGVGYYFAGAPSPILLTLMTFVVALVPFGTPFAW 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 VSI+LL +G+ A L LWG + + VD +RP ++ G K+PF+ F G++GG+ Sbjct: 264 MGVSIWLLTQGHTPEAIGLALWGMLVISWVDNLIRPIVISGATKIPFIIIFIGVLGGLTA 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 G +GLFIGPV++A+ +W+E I Sbjct: 324 FGFVGLFIGPVVLAIALAVWREWI 347 >gi|262373577|ref|ZP_06066855.1| permease [Acinetobacter junii SH205] gi|262311330|gb|EEY92416.1| permease [Acinetobacter junii SH205] Length = 372 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/328 (29%), Positives = 171/328 (52%), Gaps = 21/328 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVMCLFIVPLLFLFY 83 LK F PVL A II + +WP+Y ++ ++ E T A I V+ + +P +F + Sbjct: 35 LKYFIVPVLWAAIIAYMTWPVYL-WVQRRFFGENRPTLNATIMITLVILVIGIPFIFAIF 93 Query: 84 YGMLEMKEL---VSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSET 139 LE + L + K + + I VP ++ ++P G S + + P S+ Sbjct: 94 MLQLEGRNLYFNLQKQLFSGH--IQVPDFIRNLPIIGKDISRTVNELSADPNSIT----- 146 Query: 140 FLKTNGIDFIPRFAS--RFGMIFLDYCL-SIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 N ++I S RF + + L + F I+ LFFFYRDG I Q+ E + Sbjct: 147 ---KNVAEWIQGHLSYGRFVLSEISRNLVKLTFAIMTLFFFYRDGQLILSQVSRALEMVI 203 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + R+ G+ + A+ + ++ G +Y++A VP+ + L ++T I+A+IP Sbjct: 204 GPRVHHYLETISETTRAVVYGVGLTAVAQAILAGLSYFVADVPNPMLLTMVTFILALIPF 263 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G PIS+ +V ++L +G A + +WG + + D +RP ++ G K+PF+ FG+ Sbjct: 264 GTPISYLSVGLWLFAQGQTVEAIGVVVWGLLVVSSSDNVIRPLVISGATKIPFILIMFGV 323 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 324 LGGIASFGLVGLFIGPVILAILLAIWRE 351 >gi|296157947|ref|ZP_06840780.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295891715|gb|EFG71500.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 368 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 103/359 (28%), Positives = 179/359 (49%), Gaps = 8/359 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 TM + + +++ +++ ILV Y L F PV ALII + +WP+Y + + Sbjct: 6 TMPDRKRVIQAVLLAAILVLGYVVLWPFVIPVAWALIIAYVTWPLYCRLHALIRGRAWIS 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWAS 120 A++ T+ V + +P+ L E L V G + +P +++ IP G Sbjct: 66 ALLMTLLVGMIAFIPIASLISPVFREFLALYRNVAEYAASGPLRIPDFIARIPWLGHALQ 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L ++ PQ L ++ +G +I AS G + + + + F + LFF YRD Sbjct: 126 QLVSEFADDPQRL----HAYITQSGDRWIGELASMVGSVGRN-AIKLGFATLTLFFAYRD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ +Q+ + + + V RS G+ + AI +G + G YW AGV + Sbjct: 181 GHTLLRQVQRVMRPVLGDRLDGYLSAIGGVTRSVVYGLALTAIVQGALAGLGYWAAGVEA 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L +IT + A+IP G P + V I L+ GN F L LWGA+ + VD +RP + Sbjct: 241 PLLLTIITTLAALIPFGTPFVWIPVGIGLIANGNTFAGVGLLLWGALVVSWVDNLIRPVV 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +++PFL FG++GG+ G +GLF+GPV++A++ +W+E + E S++ Sbjct: 301 ISNAVRVPFLLVLFGVLGGIGAFGFIGLFVGPVVVAILLALWREWCTSEPETGSVDSAD 359 >gi|170742961|ref|YP_001771616.1| hypothetical protein M446_4853 [Methylobacterium sp. 4-46] gi|168197235|gb|ACA19182.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 361 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 168/332 (50%), Gaps = 6/332 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL-AVIATVSVMCL 73 +++ + V L+ L F ++ A+I+ WP+Y+ + T L + T+ + Sbjct: 24 LVLGLAAVGLWTLHEFLPALVWAVILAIALWPLYARIAGRHRAGRTILWPALFTLGAALV 83 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 +VPL L E ++++ + G PVP +++ +P G + W LSHP Sbjct: 84 VLVPLAVLAVQAAREARDVLHFWRQIEEQGWPVPDFVARLPFGASQVASWWQDTLSHPAG 143 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L +++ + FG + + F ++ LFF +RDG +++ Q + Sbjct: 144 SSELLHRLDRSSLLGV----GRSFGGQIVHRAMLFGFTLLTLFFLFRDGPALAGQALAAC 199 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 LF ++++ + + T G+ ++ +GEG++LG Y AGVP V LG TA+ A Sbjct: 200 RRLFGPRGERVAHQMAASVHGTVDGLVLVGLGEGVLLGIVYAFAGVPHPVLLGAFTALAA 259 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIP AP+ F + +G++ A + + G + F+ D +RP L+GG +LPFL Sbjct: 260 MIPFAAPVVFALAAALAAAQGSLVAAAVVVVAGFVVTFVADHFVRPALIGGATRLPFLWV 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G++GGV T GLLGLF+GP +MA + ++W+E Sbjct: 320 LLGILGGVETFGLLGLFLGPAIMAALVLLWRE 351 >gi|299768601|ref|YP_003730627.1| hypothetical protein AOLE_01755 [Acinetobacter sp. DR1] gi|298698689|gb|ADI89254.1| hypothetical protein AOLE_01755 [Acinetobacter sp. DR1] Length = 372 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 171/339 (50%), Gaps = 22/339 (6%) Query: 17 MFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F IL+ L F LK F PVL A II + +WPIY E+ L +S++ L Sbjct: 16 LFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGETRNTLNATLMISLVILV 75 Query: 75 I-VPLLFLFYYGMLEMKEL---VSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + VP + E + L + + V + + VP ++ D+P G S + + Sbjct: 76 VGVPFTCAIFILQHEGRNLYFDLQRQVFSGH--LSVPDFIRDLPFVGKEISRTLNELNND 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSIS 185 P S +++++ +G + L + + F + +LFFFYRDG I Sbjct: 134 PNSTIQNVAAWVQSH---------LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQMIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 SQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVVIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWRE 343 >gi|270157435|ref|ZP_06186092.1| putative membrane protein [Legionella longbeachae D-4968] gi|269989460|gb|EEZ95714.1| putative membrane protein [Legionella longbeachae D-4968] Length = 307 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 17/309 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMCLFI 75 II +SL+ + F ++ A II ++P+Y F K++ S L ++ L + Sbjct: 7 IIALSLFIIHRFIPSMIWASIIVIATYPLYERWRRFFGSKDDLSALLFTTLIGLLLLLPL 66 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW-ASEL---WTKHLSHPQ 131 L+ L + E++ ++ + N+ G P +L + P W S+L W ++ P Sbjct: 67 SWLVGLL---IKELQIFINFLQSLNEKGGMAPEFLKNFP---WIGSDLVVYWDNNIGKPG 120 Query: 132 SLK-ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +K +LS L + + + G + + F +++LFFFYRDG + Q+ Sbjct: 121 MIKGLLSNIHLSLTPTSY---YVKQIGSNLAHRSVQVGFTLLSLFFFYRDGDRLITQIYL 177 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +GE+ W + + +PK +R+T G ++ +G G ++G Y L G P+ +G ITA+ Sbjct: 178 VGENCLGKRWFRYADRLPKALRATVNGTIVVGLGVGFLMGVCYGLVGFPAPTLVGFITAL 237 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 AMIP PI F V++ L G++F A + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 238 AAMIPFVVPIVFITVAMILFAFGSMFGAIAVLVWGTLVMFVADHFIKPALIGGAIELPFL 297 Query: 311 PTFFGLVGG 319 FG++GG Sbjct: 298 AVLFGILGG 306 >gi|198282946|ref|YP_002219267.1| hypothetical protein Lferr_0810 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666280|ref|YP_002425149.1| hypothetical protein AFE_0661 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247467|gb|ACH83060.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518493|gb|ACK79079.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 351 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 12/316 (3%) Query: 31 FAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P L A I+ + +WP+ ++ A AT+ + +FI+P++FL E+ Sbjct: 35 FLPALGWAAILVYATWPLAGPM--RRHWPPVPAAAGATLMLALIFILPVIFLSISLGTEL 92 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI-LSETFLKTNGIDF 148 +++ + + H + L+ IP W EL + P + K L L + + Sbjct: 93 HHVLTDLGSVDAH-TTLEASLNRIP---WLHELLAQI---PAAWKTKLMPGALTPDLSAW 145 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 R S G I + +I ++I FFFYR G + QL + R V Sbjct: 146 AGRLGSVAGGIG-RFGTLLILVLITAFFFYRHGEVLVDQLRRFVGQVLGQRGDAYLRTVA 204 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 IR+ G+ A+ +G + G YW+AG+P+ V L ++T + + IP G P+ + A SI+ Sbjct: 205 STIRAVIYGILATAVAQGALAGLGYWVAGLPAPVLLAIVTLLFSFIPFGTPLVWGAASIW 264 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LL +G I+ L LWG + + +D +RP ++ +++PFL FG++GG+ G LGL Sbjct: 265 LLSQGEIWAGVGLALWGTLVVSWIDNLIRPLVISNAVRIPFLLVLFGVLGGILAFGFLGL 324 Query: 329 FIGPVLMALIAVIWKE 344 F+GPVL+A++ IW E Sbjct: 325 FLGPVLLAVLLAIWSE 340 >gi|91778031|ref|YP_553239.1| hypothetical protein Bxe_B2098 [Burkholderia xenovorans LB400] gi|91690691|gb|ABE33889.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 368 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 100/343 (29%), Positives = 174/343 (50%), Gaps = 8/343 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ML+ + +++ M++ ILV Y L F PV ALII + +WP+Y + + A Sbjct: 7 MLDRKRVIQAMLLAAILVLGYVVLWPFVIPVAWALIIAYVTWPLYCRLHALIRGRAWISA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASE 121 ++ T+ V + +P+ L E L V G + VP +++ IP G + Sbjct: 67 LLMTLLVGVVAFIPIASLISPVFREFLALYRNVAEYAASGPLRVPDFIARIPWLGHSLQQ 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L ++ PQ L ++ +G ++ AS G + + + + F + LFF YRDG Sbjct: 127 LVSEFADDPQRL----HAYITQSGDRWVGELASMVGSVGRN-AVKLGFATLTLFFAYRDG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ Q+ + + + V RS G+ + A+ +G + G YW AGV + Sbjct: 182 RALLLQVQGVMRPVLGDRLDGYLSAIGGVTRSVVYGLALTAVVQGALAGLGYWAAGVKAP 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L +IT + A+IP G P + V + L+ GN+F L LWGA+ + VD +RP ++ Sbjct: 242 LLLTIITTLAALIPFGTPFVWIPVGVGLIANGNMFAGVGLLLWGALVVSWVDNLIRPMVI 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +++PFL FG++GG+ G +GLF+GPV++A++ +W+E Sbjct: 302 SNAVRVPFLLILFGVLGGIGAFGFIGLFVGPVVVAILLALWRE 344 >gi|126643157|ref|YP_001086141.1| hypothetical protein A1S_3142 [Acinetobacter baumannii ATCC 17978] Length = 329 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 109/180 (60%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + + F I++LFFFYRDG +I Q+ E + + + R+ G+ + AI Sbjct: 121 VKLCFAILSLFFFYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIA 180 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + ++ G +Y++AGVP+ + L + T ++A+IP G P+S+ V ++L +G A + LW Sbjct: 181 QAVLAGLSYFVAGVPNPMVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILW 240 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + + D +RP ++ G ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E Sbjct: 241 GVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWRE 300 >gi|257091790|ref|YP_003165431.1| hypothetical protein CAP2UW1_0142 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044314|gb|ACV33502.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 375 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 86/354 (24%), Positives = 175/354 (49%), Gaps = 20/354 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK------KEESSTFLAVIATVSVM 71 I+++S + L F +L+A + SWP+Y+ F ++ + SS +I T+++ Sbjct: 29 LIVILSAWILNSFLQAMLAACVTAIASWPLYTRFAARLPRCIGRNSSS----LIFTLALT 84 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHP 130 + PL+F F + E L+S + +A++ GI VP+ L + P G W + W L+ P Sbjct: 85 IFVLAPLMFAFGALLSEAHALLSAIAVADKKGIAVPQGLENAPLIGPWLAARWQSQLASP 144 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L ++ +T+ +P +A G + + I F ++ LFF Y++G S++ Sbjct: 145 GALLTWTQ---RTDAAALVP-WAQSLGQFTVRHAFIIFFTVLLLFFLYQEGESLAAGFRR 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + +R++ M ++A+ +GL G AY + GVP +T + Sbjct: 201 VLRRCLGEHADGFADLATRAVRASVNSMLVVALFDGLASGVAYAIVGVPHAAVWAAVTGL 260 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +A++P ++ A+++ L + G LF DK +RP + ++L F+ Sbjct: 261 LALVPFLGYVAVGALALQLAMTVTTTPPLLALGLGCFVLFCGDKVVRPVVACNGVRLRFV 320 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-----SIMAIKENKEKISSN 359 G +GG +GL+GL IGPV++ L +W++ +++ + ++ ++S + Sbjct: 321 WVLMGCLGGFEVLGLIGLVIGPVVLTLARELWEQRVRDLAVVDVTDSNPQVSQS 374 >gi|331000798|ref|ZP_08324444.1| hypothetical protein HMPREF9439_02096 [Parasutterella excrementihominis YIT 11859] gi|329570326|gb|EGG52059.1| hypothetical protein HMPREF9439_02096 [Parasutterella excrementihominis YIT 11859] Length = 402 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 11/334 (3%) Query: 31 FAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV-PLLFLFYYGMLE 88 FA +S A +I SWP++ + K+ +A + VS++ + IV P+ L E Sbjct: 33 FATAMSVAAVIAIVSWPLFKR-VRKEVGGRNLVATLIMVSLLAILIVLPIAGLSLVSAQE 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + L+ V G VP L +IP G WA L + + L +++ D Sbjct: 92 IPTLIRYVREWIASGFTVPEELKEIPFVGEWAYTQAAHLLGNKEELAAIAQKLF-----D 146 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + R A ++ D L + M+ +FFFYRDG +SQ+ +L + + ++ I+ Sbjct: 147 PVSRAALAGAVMLGDGLLQLFLMLFVIFFFYRDGEVLSQKSLALLTRMSGSIGAEVRDII 206 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 RS G+ A G+G+V +W+AGVP + LGV +++ +P G P+ + + Sbjct: 207 VNTTRSVVFGIVGSAAGQGVVALIGFWIAGVPGAITLGVAVFVLSAVPIGPPLVWGPAAF 266 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L KG + A L LWG++ + VD L+P L+ LP + G+ GGV G +G Sbjct: 267 WLYYKGEVGMAIFLVLWGSLAVSSVDNFLKPILISKGASLPLSLIYLGVFGGVLAFGFMG 326 Query: 328 LFIGPVLMALIAVIWKE--SIMAIKENKEKISSN 359 + +GPV++A+ + K S+ A +K++ ++ Sbjct: 327 IILGPVVIAVGIAMSKTWLSVSATVNDKDQPTTK 360 >gi|303257155|ref|ZP_07343169.1| putative membrane protein [Burkholderiales bacterium 1_1_47] gi|302860646|gb|EFL83723.1| putative membrane protein [Burkholderiales bacterium 1_1_47] Length = 402 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 11/330 (3%) Query: 31 FAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV-PLLFLFYYGMLE 88 FA +S A +I SWP++ + K+ +A + VS++ + IV P+ L E Sbjct: 33 FATAMSVAAVIAIVSWPLFKR-VRKEVGGRNLVATLIMVSLLAILIVLPIAGLSLVSAQE 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + L+ V G VP L +IP G WA L + + L +++ D Sbjct: 92 IPTLIRYVREWIASGFTVPEELKEIPFVGEWAYTQAAHLLGNKEELAAIAQKLF-----D 146 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + R A ++ D L + M+ +FFFYRDG +SQ+ +L + + ++ I+ Sbjct: 147 PVSRAALAGAVMLGDGLLQLFLMLFVIFFFYRDGEVLSQKSLALLTRMSGSIGAEVRDII 206 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 RS G+ A G+G+V +W+AGVP + LGV +++ +P G P+ + + Sbjct: 207 VNTTRSVVFGIVGSAAGQGVVALIGFWIAGVPGAITLGVAVFVLSAVPIGPPLVWGPAAF 266 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L KG + A L LWG++ + VD L+P L+ LP + G+ GGV G +G Sbjct: 267 WLYYKGEVGMAIFLVLWGSLAVSSVDNFLKPILISKGASLPLSLIYLGVFGGVLAFGFMG 326 Query: 328 LFIGPVLMALIAVIWKE--SIMAIKENKEK 355 + +GPV++A+ + K S+ A +K++ Sbjct: 327 IILGPVVIAVGIAMSKTWLSVSATVNDKDQ 356 >gi|296115814|ref|ZP_06834440.1| hypothetical protein GXY_08485 [Gluconacetobacter hansenii ATCC 23769] gi|295977791|gb|EFG84543.1| hypothetical protein GXY_08485 [Gluconacetobacter hansenii ATCC 23769] Length = 352 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 171/343 (49%), Gaps = 16/343 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +I+ SLY + F + +I+ T++P+Y + ++ + +++ +V + L Sbjct: 16 VCLVIMASLYIEQSFLGAFVWGIILSITAFPLYQ-VLRRRGCGNMVASLVISVGIFALLA 74 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLK 134 VPL+ + + ++ L A+Q GIPVP+ ++D+PGG + LW K+LS P L+ Sbjct: 75 VPLVAMVAKAVADLPSLYDWAKSASQTGIPVPKQVADLPGGSSKIAPLWQKYLSDPNELR 134 Query: 135 I----LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +S TF +G + R ++ + + +++++FF S+ + + Sbjct: 135 TWLGSVSHTFATADGKNLTHRL--------MEVAETFMIAVLSVYFFLVSAESLIGDIRA 186 Query: 191 LGEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +G+ L I IV V R T G+ ++ +GEG ++G Y++AG P ++TA Sbjct: 187 VGKKFLGRRATDAIDNIVGSV-RGTVAGLVLVGMGEGGIIGIGYFMAGTPHPALFMLVTA 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I++++P P+ + A + L G + F D +RP L+ G K+PF Sbjct: 246 IVSIVPFCGPVILALAAATTFAASGGGAALIVGLIGCVAYFFGDHFVRPKLISGNTKIPF 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L ++GG+ GLLGLFIGP ++A+ +W+ ++ + + Sbjct: 306 LAVLTAILGGLHACGLLGLFIGPAVIAVAFSLWRSAVADSRAD 348 >gi|167572529|ref|ZP_02365403.1| hypothetical protein BoklC_22016 [Burkholderia oklahomensis C6786] Length = 231 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 4/230 (1%) Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G AS W +L+ P + E +K + F FG + FM++ L Sbjct: 3 GSQQASGWWHAYLAKP----LHPEAAVKGVDDGAVVTFGRHFGSRIAHAAVLFGFMLVTL 58 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F ++ G +S L + F + + + + T G+ ++ GEG++LG AY Sbjct: 59 FVIFQAGPRLSGALLTGVRRAFGDNGAALLQRMAAAVYGTVTGLVVVGFGEGVLLGVAYA 118 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 AG+P LG++TA+ AM+P AP+ F +++L ++G + A L +G + +F+ + Sbjct: 119 FAGLPHAALLGLVTAVAAMLPFCAPLVFCGAALWLFVQGAVGWAIGLAAFGFVVVFVAEH 178 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ V+W E Sbjct: 179 FVRPVLIGNSARLPFLLVLFGILGGAETFGLLGLFIGPALMTVLTVLWVE 228 >gi|296535339|ref|ZP_06897542.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] gi|296264338|gb|EFH10760.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] Length = 357 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 151/313 (48%), Gaps = 7/313 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ F + +L A I+ F +WP Y + + S A++ M L +PLLF Sbjct: 33 LRPFLSALLWAAILAFCTWPAYRTLRDRLRLSPGLAALLMVTLEMLLVGLPLLFATPIRA 92 Query: 87 LEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSETFLKTN 144 +++ L S V G+P + WL IP W E + Q L++ Sbjct: 93 EDIEGLRSSVENLIASGLPGLSDWLGRIP---WVGEFLRERWDALQLDFTPLTDMLRPYA 149 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G+ I + A + L +I I+ FFFYRDG ++ L+ L + A +++ Sbjct: 150 GV--IAQQALGVLLAVLSGLAELILAILLSFFFYRDGPRMAAGLEGLVVRIAGAQARRLV 207 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 ++ V G+ A+ +GL+ G W++GVP L VI I++++P GAP+ + Sbjct: 208 QLTANVTTGVVYGLLGTAVAQGLMTGFGLWISGVPQPALLAVIAGIISVLPVGAPLVWLP 267 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +++L +G+ L ++GA + VD +RP+L+ LP L T G +GGV G Sbjct: 268 AALWLFSQGSTGWGLFLLVYGAGGISSVDNVIRPWLISRGADLPLLLTILGALGGVFAFG 327 Query: 325 LLGLFIGPVLMAL 337 LGLF+GPVL+A+ Sbjct: 328 FLGLFLGPVLLAV 340 >gi|319941451|ref|ZP_08015779.1| hypothetical protein HMPREF9464_00998 [Sutterella wadsworthensis 3_1_45B] gi|319805071|gb|EFW01901.1| hypothetical protein HMPREF9464_00998 [Sutterella wadsworthensis 3_1_45B] Length = 383 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/314 (26%), Positives = 155/314 (49%), Gaps = 12/314 (3%) Query: 11 IMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+R + M ++ V Y L+ F +L A ++ +WP+++ S +SST A + +S Sbjct: 24 IIRIVFMVVVAVGCYLVLEPFLTAILIAAVLAVVTWPVFNKLRSGMRQSSTAAASVMVLS 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLS 128 ++ L ++PL FL ++ V + +P+ + + IP G W L+ + +S Sbjct: 84 IVVLVLIPLSFLLVALAQQVPRGVQAAAAWLKDPLPILQAVQSIPYAGDW---LYGELVS 140 Query: 129 --HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 PQ+ + L+ ++ A G + + F+ +FFFYRDG + Sbjct: 141 AIDPQTFAHTMQRILEPLS-TWVLNAAVNVG----SGVMQLAFVTFIVFFFYRDGSWFAD 195 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ ++ E + ++I++I+ RS G+ AIG+GLV G +W+AGVP + L Sbjct: 196 RISAVVERVSGGIAEEITKILVNTTRSVVFGIVGTAIGQGLVAGIGFWIAGVPGVLILSF 255 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++++IP G P+ + +++L KG + A L LWG + + VD ++P L+ Sbjct: 256 AVCVLSVIPIGPPLIWLPAAVWLWSKGELGMAAFLVLWGTLAVSSVDNFIKPLLIARGTS 315 Query: 307 LPFLPTFFGLVGGV 320 +P F G+ GGV Sbjct: 316 MPIALIFLGVFGGV 329 >gi|326386386|ref|ZP_08208009.1| hypothetical protein Y88_2280 [Novosphingobium nitrogenifigens DSM 19370] gi|326209047|gb|EGD59841.1| hypothetical protein Y88_2280 [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 177/340 (52%), Gaps = 14/340 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF-LAVIATVSVMCLF 74 + ++L ++ L F + I + WPI+ + L ++ T+ V+ +F Sbjct: 33 VAVLVLAGIWTLHPFLPALGWGGIFAISLWPIHERCAAHWPSGRGLALPILFTLLVLLIF 92 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP++ + + + + AN G+PVP +++ +P G + W +L P+S+ Sbjct: 93 VVPMVMVASAVIHDSMAATQWLATANTQGVPVPDFVAHLPYGDHLAAWWQSYLGTPESIS 152 Query: 135 ILS----ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 LS + L+T G + A R + + FM++ LFF RDG S++Q L Sbjct: 153 RLSHRATDMHLQT-GEKILGGLAHRL--------ILLFFMLLTLFFLLRDGTSVAQALRI 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F ++++ + IR T G+ I+ GEG++LG AY L+GV LG++T + Sbjct: 204 GSRRAFGEAGERVAHQAAQAIRGTVNGLVIVGFGEGVLLGFAYELSGVTHAALLGLLTGL 263 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++ IP GA ++ A + L+ G+I A + + G + +F+ D +RP +GG +LPFL Sbjct: 264 LSAIPFGAMVAVAAAAGLLVADGSILAAGIVLVIGIVVIFVADHFVRPAFIGGATRLPFL 323 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG+ T GL+GL +GP ++A++ ++W+E + +K Sbjct: 324 WVLLGILGGIETWGLIGLVMGPAIIAVLMLLWREWVGMVK 363 >gi|297539825|ref|YP_003675594.1| hypothetical protein M301_2662 [Methylotenera sp. 301] gi|297259172|gb|ADI31017.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 354 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 165/325 (50%), Gaps = 10/325 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F AP+ A ++ + SWP+ T A +AT + +PL++L + LE+ Sbjct: 32 FLAPIAWAGVLAYASWPVAERIRRWCNNKDTLAAFLATALLALTLFLPLIWLVWLAQLEL 91 Query: 90 KELVS--KVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L + LAN PVP L +P G W + ++P ++ + +L + Sbjct: 92 GHLFPALQAFLANPP--PVPETLRSLPWLGEWLMQQQAHFTANPNGASLVFKNWLAAHTA 149 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + A G +IF+++ LFFF+RDG I ++L + E A+ Sbjct: 150 D-LSMLAGGLG----KSLAKMIFVVVILFFFFRDGTRIVRELRHVLERFIGAHVHDYLHA 204 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 R+ G+ + A+ +G+V G YW+AG+ S V GV+T I+A+IP G P+++ A Sbjct: 205 AGTTTRAVVYGILLTALVQGVVAGLGYWVAGLSSPVMFGVLTMILALIPFGTPLAWGAAG 264 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + LL++G A +++WGA + +D LRP + +PFL FG++GG+ GL+ Sbjct: 265 LLLLLQGETGAAIGVWIWGAAIVSQLDNVLRPLFISSISPIPFLLVLFGVLGGLLAFGLV 324 Query: 327 GLFIGPVLMALIAVIWKESIMAIKE 351 GLFIGP++++++ +W+E + E Sbjct: 325 GLFIGPIVLSVVWAVWREWTAHLDE 349 >gi|330811059|ref|YP_004355521.1| hypothetical protein PSEBR_a4112 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379167|gb|AEA70517.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 345 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL+ + F++ + ++ F SWP+ + A + TV M L VPL++L Sbjct: 20 SLWVMAPFWSALFWGAVLAFASWPLMRLLTRWVNGRESLAAALLTVGWMLLVAVPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + + A G+P P WL+ +P G +W +L + + + Sbjct: 80 FNLADHVRDATAFIKDAQVDGLPEAPTWLAGVPLVGERLVGIWNSIDQQGAALMVSARPY 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R A G I L+ LSI+F+ FFFYRDG ++ + L E L Sbjct: 140 LGQVGNWLLARSAQIGGGI-LELTLSIVFV----FFFYRDGPRLAVFVHGLLERLIGDRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +V ++ G+ A + ++ + +AGVP + LG++T ++++IP G P+ Sbjct: 195 GYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 IAFGFIGLFIGPTLLAV 331 >gi|330994841|ref|ZP_08318763.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758102|gb|EGG74624.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 331 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/322 (23%), Positives = 154/322 (47%), Gaps = 17/322 (5%) Query: 39 IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 I+ T++P+Y + ++ + A + ++ L VP++ + +E+ L++ Sbjct: 22 ILSITTYPLYRRLV-QRGMGNGLAAGLIAAAIFALLAVPMIAMAVRAGMELPSLMAWGRG 80 Query: 99 ANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLK----ILSETFLKTNGIDFIPRFA 153 A GIP+ ++ IP G + LW +LS P+ L+ + S F +G + R Sbjct: 81 ALHDGIPLSPQVAAIPHIGPRLAGLWRHYLSDPEELRHWTAVASRMFATGDGRELPHRV- 139 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 +D + + ++++F+ ++ + ++G A + + R +R Sbjct: 140 -------MDMTETFVIATLSVYFYLAASRTLQADIRAVGSRFLGARARDVIRNTVGAVRG 192 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 T G+ ++ +G+G+++G Y++AG P L ++TA++++IP P+ A + Sbjct: 193 TVAGLVLVGLGQGVLVGIGYFIAGTPHPALLTLLTAVVSIIPFCGPVLLCATMLMTFAAN 252 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A + + GAI D +RP L+ G +PFL ++GG+ GLLGLFIGP Sbjct: 253 GVTQAVIVGVIGAIAYGAGDHFVRPRLISGSTSIPFLAVLTAILGGLHMFGLLGLFIGPT 312 Query: 334 LMALIAVIWKESIMAIKENKEK 355 ++A+ +W+ A E + + Sbjct: 313 VIAVALSLWRT---AAAEEQAR 331 >gi|297539685|ref|YP_003675454.1| hypothetical protein M301_2517 [Methylotenera sp. 301] gi|297259032|gb|ADI30877.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 352 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 166/337 (49%), Gaps = 10/337 (2%) Query: 5 MLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+N + R I+ ++++ +Y L+ F A L A I +WP+Y + + T+ A Sbjct: 1 MINTNQVTRIAIITLLVIGCIYVLQPFMAAALFAAIFCLFTWPLYHRLWLRLGKRDTWAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASE 121 +I T+ ++ I+P+ +L +L +++ Q P VP W+ ++P G S Sbjct: 61 MIMTLLLLIALILPMAYLAMNLADSSDQLFNELGTRLQSLQPKVPDWVRNLPIVGEQISH 120 Query: 122 LWTKHLSHPQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + + L K+L + + + + FA R + L ++ ++ FFFYRD Sbjct: 121 SWERATASQEELMKLLRQYY------EPMRTFALRAVQLVAGGFLQLLLVVFVAFFFYRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I+Q L ++ L +++ + ++ LG+ A+ + +V + LAG P+ Sbjct: 175 GTRIAQGLVTIVRRLGGELGEEMLILSCNTVKGVMLGIFGTALAQSVVAMIGFLLAGAPA 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L T +++IP G P+ + S +L +G A L L+G + + VD ++P L Sbjct: 235 PLLLACATFFLSVIPVGPPLIWGGASFWLYSQGEHGWAIFLALYGLLAISTVDNVVKPIL 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + LP L FG++GG T G +G+F+GP L+A+ Sbjct: 295 ISHSSHLPLLLIVFGVLGGALTFGFIGIFLGPTLLAV 331 >gi|70729140|ref|YP_258876.1| hypothetical protein PFL_1750 [Pseudomonas fluorescens Pf-5] gi|68343439|gb|AAY91045.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 350 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 89/336 (26%), Positives = 155/336 (46%), Gaps = 10/336 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + + F++ + ++ F SWP+ + A + T+ M L PL++L Sbjct: 20 SFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLNGRESLAAALLTLGWMVLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 +++ + + G+P P WL ++P G LW +L + + + Sbjct: 80 LNLADHVRDATAFIKDVQVDGLPAAPEWLGNLPLVGERLVGLWNSIDQQGAALMLAVKPY 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R A G I L+ LSI+F+ FFFYRDG ++ + L E L Sbjct: 140 LGQVGNWLLARSAQIGGGI-LELTLSIVFV----FFFYRDGPRLALFVHKLLERLIGERA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +V ++ G+ A +GL+ + +AGVP + LG++T ++++IP G P+ Sbjct: 195 GYYIDLVAGTVQRVVNGVIGTAAAQGLLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENK 353 G +GLFIGP L+A+ + + W S +E + Sbjct: 315 IAFGFIGLFIGPTLLAVAYSLLLDWSASQARAQEPR 350 >gi|330816979|ref|YP_004360684.1| hypothetical protein bgla_1g20910 [Burkholderia gladioli BSR3] gi|327369372|gb|AEA60728.1| hypothetical protein bgla_1g20910 [Burkholderia gladioli BSR3] Length = 347 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 7/320 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ F + ALII + SWP++ S + A++ T V + +VP+L L Sbjct: 26 LRPFLVSMTWALIIAYVSWPVHQRMQSLTNHRRSISALLTTSLVTVVLVVPILLLALPLS 85 Query: 87 LEMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E E ++ +++H +PR S +P W +W + + L Sbjct: 86 RESVEFAHRMAAWFSDRHHT-LPRLASSVP---WLG-VWLQAAADDIGRDARESRALLAQ 140 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + A++ L F ++ LFF YRDG ++ QL + E L + Sbjct: 141 WGNHAMGAAAQLAANAGRNALKFGFAVLTLFFVYRDGRTVLDQLRLVFEPLLGKRFDVYL 200 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +V + G + A +G G YW AGV + + L V+TA+ A+ P G P + Sbjct: 201 ASIGEVCCAVAYGGVLTATAQGTAAGIGYWAAGVEAPLLLSVLTALAALFPFGTPFVWVP 260 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V + LL+ G ++ L WG + + +D +RP L+ G ++PFL F ++GG+ G Sbjct: 261 VGLALLLDGRLWAGVSLLAWGTLAISGIDNLVRPLLISGGTRMPFLLAVFSILGGIAAFG 320 Query: 325 LLGLFIGPVLMALIAVIWKE 344 +G F+GP+++A + +W+E Sbjct: 321 FVGFFLGPIVVATLLAVWRE 340 >gi|325527793|gb|EGD05065.1| hypothetical protein B1M_08312 [Burkholderia sp. TJI49] Length = 314 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 7/282 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + T +A + TV++ L ++P+ Sbjct: 36 WVIRAFIPAIAWACVIAIAMWPLLKRFESHRLVRNRPTIVATVITVAISLLVVLPVALAL 95 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + + ++ + +GIP+P +S +P G ++ W +L HP + Sbjct: 96 TQAIAQAHDMRVWLRTIQDNGIPLPDVVSRLPYGSTQIADWWQANLGHPLHA---ASAMH 152 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 NG FI F FG L FM++ LF R G +S L F A Sbjct: 153 GVNGEKFIA-FGRLFGTKLAHALLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGADGA 211 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 212 QLIERMVGAVNGTVTGLVVVGLGEGALLGIAYALAGVPHAALLGLVTAVAAMLPFCAPVV 271 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 F +++L ++G A + + G + +F+ + +RP L+GG Sbjct: 272 FCGAALWLFVQGATTWAVVVAVTGFVVVFVAEHFVRPVLIGG 313 >gi|312959876|ref|ZP_07774391.1| hypothetical protein PFWH6_1780 [Pseudomonas fluorescens WH6] gi|311285823|gb|EFQ64389.1| hypothetical protein PFWH6_1780 [Pseudomonas fluorescens WH6] Length = 353 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + + F++ + ++ F SWP+ + A I T+ M L VPL++L Sbjct: 20 SFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAGILTLGWMLLVAVPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ V+ + G+P P WL IP G +W +L + + + Sbjct: 80 FNLADHVRDAVALIKDIQVDGLPEAPTWLGSIPFVGERLVGMWNSIDQQGAALMVSIKPY 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R A G I L+ LS++F+ FFFYRDG ++ + L E L Sbjct: 140 LGQVGNWLLARSAQIGGGI-LELTLSLVFV----FFFYRDGPRLAMFVHRLLERLIGDRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +V ++ G+ A + ++ + +AGVP + LG++T ++++IP G P+ Sbjct: 195 GYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 IAFGFIGLFIGPTLLAV 331 >gi|220921861|ref|YP_002497162.1| hypothetical protein Mnod_1869 [Methylobacterium nodulans ORS 2060] gi|219946467|gb|ACL56859.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 363 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 96/346 (27%), Positives = 172/346 (49%), Gaps = 7/346 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESS 59 RET + M++ + + L+ L GF ++ A+I+ WP+Y+ + + Sbjct: 12 RETERSHAVARAAMVLGLASIGLWTLHGFLPALVWAVILTIALWPLYARLTRRFPGGRHN 71 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMW 118 + T+++ + +VPL F+ E +++ + G PVP ++ +P G Sbjct: 72 LLWPSLFTLALALVILVPLAFVAVQAAREAHDVLQFWRQIEEQGWPVPEAVAHLPFGAAQ 131 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S W ++L HP L +++ I FG + F ++ LFF + Sbjct: 132 VSAWWQENLGHPAGTSDLLHRIERSSLIGL----GGSFGKQIAHRVVLFGFTLLTLFFLF 187 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG ++++Q LF + ++++R + + T G+ ++ +GEG +LG Y AGV Sbjct: 188 RDGPAVAEQGLVACRRLFGSRGERVARQMAASVHGTVDGLVLVGLGEGFLLGLVYHFAGV 247 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P V LG TA+ AMIP + F ++ + G++ A + + G + F+ D +RP Sbjct: 248 PHPVLLGAATALAAMIPFAVVVVFGLAAVLAAVNGSVAAAAVVVIAGMVVTFVADHFVRP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+GG +LPFL G++GGV GLLGLF+GP +MA + ++W++ Sbjct: 308 ALIGGATRLPFLWVLLGILGGVENFGLLGLFLGPAVMAALVLLWRD 353 >gi|77460421|ref|YP_349928.1| hypothetical protein Pfl01_4200 [Pseudomonas fluorescens Pf0-1] gi|77384424|gb|ABA75937.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 346 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + + F++ + ++ F SWP+ + A++ T+ M L PL++L Sbjct: 20 SFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLNGRESLAALLLTMGWMLLVAGPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + + G+P P WL +P G +W +L + + + Sbjct: 80 FNLADHVRDATAFIKDVQVDGLPEAPSWLGGVPLVGERLVGIWNSIDQQGAALMVTVKPY 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R +++ G L+ LSI+F+ FFFYRDG ++ + SL E L Sbjct: 140 LGQVGNWLLAR-SAQIGSGILELTLSIVFV----FFFYRDGPRLAAFVHSLLERLIGDRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +V ++ G+ A + ++ + +AGVP + LG++T ++++IP G P+ Sbjct: 195 GYYIDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 IAFGFIGLFIGPTLLAV 331 >gi|134096432|ref|YP_001101507.1| hypothetical protein HEAR3279 [Herminiimonas arsenicoxydans] gi|133740335|emb|CAL63386.1| Conserved hypothetical protein, putative permease [Herminiimonas arsenicoxydans] Length = 369 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 17/361 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +M P+ + + +I+ SL F L F+ V A ++ P Y + K + S Sbjct: 9 HSMNYPEIQQKTFLGLLIIFSLAFIGILLPFYGAVFWAAVLAILFSPFYRKLLIKMNQHS 68 Query: 60 TFLAVIATVSVMCLFIV--PLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGG 116 LA +AT+ MCL +V PL+ + + E L + + G+ + +S +P Sbjct: 69 N-LAALATLG-MCLVVVIIPLVLISISLVHEASALYANIRSGQIDFGVFFQKVISALPS- 125 Query: 117 MWA-SELWTKHLSHPQSLKI-LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W S+L L+ SL+ LS ++ G +FI + A G ++ +S M+ L Sbjct: 126 -WVVSQLERFGLTDMTSLQAKLSNAAVQ--GSEFITKQAISIGQNTFNFLVSFTIMLYIL 182 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF RDG I+ ++ L + + + + IR+T G I+A +G + G A+W Sbjct: 183 FFLLRDGDRIATRIKQ-AAPLNAEHKRLLFNNLTTAIRATVKGNIIVAAVQGALGGIAFW 241 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GV + GV+ A ++++P GA + + V+IY L+ G ++ L +G + + +VD Sbjct: 242 FLGVQGALLWGVLMAFLSLLPAVGAALIWVPVAIYFLLTGAVWQGVTLIAFGVLVIGLVD 301 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LRP LVG +LP VGG+ +GL G IGPV+ AL +W E + K+ + Sbjct: 302 NILRPMLVGKDTQLPDFVVLISTVGGMAWLGLNGFVIGPVIAALFISLW-EIFSSGKQKQ 360 Query: 354 E 354 E Sbjct: 361 E 361 >gi|167034729|ref|YP_001669960.1| hypothetical protein PputGB1_3734 [Pseudomonas putida GB-1] gi|166861217|gb|ABY99624.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 350 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 11/312 (3%) Query: 32 APVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +SAL I+ F SWP+ T A + T + + + +PL++L + Sbjct: 25 APFISALLWGAILAFASWPLMRLLTRLLGGRETLAASLLTTAWILIVALPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + V G+P P WL IP G W +L ++ + G Sbjct: 85 HIRDATAFVRDVQVDGLPEAPAWLGGIPFVGERLVNWWQSLDQQGAALLASAKPYFGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R +++ G L+ LS++F+ FFFYRDG ++ + L L + + Sbjct: 145 NWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLAAFVLRLLHRLMGERAEYYLQ 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A +GL+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 200 LVAGTVQRVVNGVIGTAAAQGLLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAWIPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ KG A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TGWLVWKGEYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLFIGP L+A+ Sbjct: 320 IGLFIGPTLLAV 331 >gi|206890655|ref|YP_002249261.1| hypothetical protein THEYE_A1463 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742593|gb|ACI21650.1| membrane protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 357 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 46/331 (13%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 LK FFA A++I P++ ++ K + AV+ + V+ LF+ P +++ Y + Sbjct: 35 LKSFFASAGWAIVIALVFHPVFD-YLKKFLKYRGLTAVVTIILVIVLFLFPFVYVSYQII 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG- 145 LE EL+ G+ +P +++I +SHP KIL + T G Sbjct: 94 LEAGELIK--------GVNLPELINEI-------------MSHPLLSKILEKLSFITGGD 132 Query: 146 ---IDFIP-------------RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ I R A FG I L L++I FFF +DG ++++ Sbjct: 133 IASLEIIIKNELSGLLKEGALRIAHGFGDI-LSLFLNLILTFFIAFFFLKDGHHFVKKIE 191 Query: 190 SLGEHLFPAYWKK--ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 E L A K I + +I +TF G +IA+ +G +LG ++ +PS G Sbjct: 192 ---EFLPFAEVDKTSIRNQIRNIIYTTFYGGILIAMLQGTILGITFYFLDMPSSTLWGFA 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA+ + IP GA + SIYLL KG I L + GA + ++D L+P ++ G +K Sbjct: 249 TAVASFIPVLGAFAVWGPASIYLLAKGLIIKGLILAMVGAFIISLIDNVLKPLIIKGKVK 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 LP + F ++GG++ GL+G IGP++ +L Sbjct: 309 LPLIFIFLSVLGGIKIFGLIGFIIGPLVFSL 339 >gi|212704261|ref|ZP_03312389.1| hypothetical protein DESPIG_02316 [Desulfovibrio piger ATCC 29098] gi|212672341|gb|EEB32824.1| hypothetical protein DESPIG_02316 [Desulfovibrio piger ATCC 29098] Length = 368 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 156/329 (47%), Gaps = 22/329 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ L+ FF + ++I S P+Y + + ++ A+ + + L IVP ++FY Sbjct: 25 LWMLRPFFDVIFWGIVIALLSTPVYDA-LQRRRMGRNLAALTCVILSLVLIIVPCAYIFY 83 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL-KILSETFLK 142 + E+ L +++ L ++ G+ + T++ P+ + + LSE +K Sbjct: 84 TFINEVANLYARLTSGGHDIRETLERLREVAPGV--QDWLTRYGYGPEVITQKLSELAVK 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL-------GEHL 195 +G+ + R G +++ + + M+ FF RDG +QL L G+H Sbjct: 142 ISGL--VARNTVALGGSTVNFLVDLCIMLYLAFFLVRDG----KQLRVLLIRALPFGDHR 195 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K + +V+R+T G ++A+ +G + G +W+ G+ + V GV+ ++++IP Sbjct: 196 EDLLFAKFA----EVLRATVKGSLLVAMAQGALGGLIFWILGIKAPVLWGVVMTLLSLIP 251 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 GA + + V+ YLL+ G+ + L +G + + D LRP LVG KLP Sbjct: 252 VVGAGVVWAPVAGYLLLTGDHVSGVVLLAYGVFVIGLADNILRPVLVGRDTKLPDFMVLL 311 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG G+ G GP+L L +WK Sbjct: 312 STLGGFSLFGMDGFVTGPMLAVLFVTVWK 340 >gi|115522818|ref|YP_779729.1| hypothetical protein RPE_0793 [Rhodopseudomonas palustris BisA53] gi|115516765|gb|ABJ04749.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisA53] Length = 355 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/347 (27%), Positives = 163/347 (46%), Gaps = 30/347 (8%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ I V+L F L F++ +L L+I P++ + + + AV Sbjct: 7 KFFLLLIAAVTLAFGWVLMPFYSGLLWGLVIAILFMPLHRRLSAAMRDRDSLAAVSTVAI 66 Query: 70 VMCLFIVPLLFL---------FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ ++PL + Y L+ +E L Q +P W++D W + Sbjct: 67 VIMSVLLPLSLIGAALAREAAITYSRLQSREF-DLARLWQQVTGALPSWIND-----WIN 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L Q+ LS+ LK G F+ A G ++ +++ M+ LFF +RD Sbjct: 121 RVELADLGELQN--KLSDGLLK--GSQFLAGQALTIGQNTFEFAINLGVMLYLLFFLFRD 176 Query: 181 GFSISQQL-DSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G ++SQ++ D+L EHLF K IV VIR+T G +IA+ +G + G W G Sbjct: 177 GEALSQRIRDALPMREHLFDELLTKF--IV--VIRATIKGNMVIAMLQGALGGLMLWFLG 232 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + + V+ A ++++P GA + + V+IYLL G ++ L +G + +VD L Sbjct: 233 IGGALLWAVVMAFLSLLPAIGAGLVWLPVAIYLLATGAVWKGVLLIAYGTFVIGMVDNLL 292 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 RP LVG K+P +GG+ GL G +GPV+ A+ +W Sbjct: 293 RPILVGKDTKMPDYVVLISTLGGLEVFGLNGFILGPVIAAMFIAVWD 339 >gi|107026443|ref|YP_623954.1| permease-like [Burkholderia cenocepacia AU 1054] gi|105895817|gb|ABF78981.1| permease-like protein [Burkholderia cenocepacia AU 1054] Length = 385 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 7/253 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + +L + +GIP+P +S +P G +E W +L HP + Sbjct: 95 TQAFAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHPLHA---ATAMH 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 NG FI F +FG L FM++ LF R G +S L F Sbjct: 152 GVNGEKFIA-FGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGN 274 F +++L ++G Sbjct: 271 FCGAALWLFVQGG 283 >gi|209965732|ref|YP_002298647.1| hypothetical protein RC1_2451 [Rhodospirillum centenum SW] gi|209959198|gb|ACI99834.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 362 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 9/321 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV-PLLFLFYYG 85 +K F + +L A+I+ + +WP Y ++ + LA ++ L IV P + Sbjct: 27 VKPFLSALLLAVILVYATWPAYL-WVERTCGGRKNLAAFLMTALSSLVIVAPFAIVGATL 85 Query: 86 MLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKT 143 + + S + ++G P P WL D+P G WA W + Q L T L+ Sbjct: 86 ADSVGGISSGIRQIIENGPPPPPVWLGDVPLVGPWAVGYWADLTAGGQDLL----TLLR- 140 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +GI A G + L ++ + FF YR G I++Q+ E + Sbjct: 141 SGIRPATDLALAAGSVIGAGVLELMAAVFIAFFLYRGGRDIARQVAYAIERFTGPRVHHL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + ++ G+ A+ +G++ G + +AG+P LG +T ++++IP G P+ + Sbjct: 201 LEVAGGTVQGVIYGILGTALAQGILAGLGFVVAGIPWGPFLGFMTFVVSVIPMGPPLIWV 260 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 VS++L +G I A + WG + VD LRP+L+ LP + F G++GGV Sbjct: 261 PVSVWLATEGEIGWAVAMAAWGFFVVSSVDNVLRPYLISRGSALPLVLVFMGVLGGVLAF 320 Query: 324 GLLGLFIGPVLMALIAVIWKE 344 G++G+FIGPVL+AL + +E Sbjct: 321 GVIGIFIGPVLLALGYALMRE 341 >gi|297183286|gb|ADI19424.1| predicted permease [uncultured Pseudomonadales bacterium HF0500_12O04] Length = 349 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 163/346 (47%), Gaps = 30/346 (8%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL+ + F++ + ++ F SWP+ + A I T+ M L PL++L Sbjct: 20 SLWVMAPFWSALFWGAVLAFASWPLMRLLTRVLGGRESLAASILTLGWMLLVAGPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 +++ + V G+P P WL+ +P G +W ++ + + + Sbjct: 80 LNLADHVRDATTFVKDVQLEGLPEAPAWLAGLPLVGERLVGIWNTIDEQGAAMLVAIKPY 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---P 197 L G + R +++ G L+ LSI+F+ FFFYRDG ++ + L E L Sbjct: 140 LGQVGNWLLAR-SAQIGSGILELTLSIVFV----FFFYRDGPRLATFVHGLLERLIGERA 194 Query: 198 AYWKK-----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 Y+++ + R+V VI + + IG + +AGVP + LG+ T +++ Sbjct: 195 DYYQELVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGALVLGLATFLLS 246 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP G P+ + + +L KG+ A L +WG + + VD L+P+L+ LP + Sbjct: 247 LIPMGPPLIWVPATAWLAWKGDYGMAIFLGIWGTLIISGVDNVLKPYLISRGGNLPLVIV 306 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEK 355 G+ GG+ G +GLFIGP L+A+ + V W S ++N+ K Sbjct: 307 LLGVFGGLIAFGFIGLFIGPTLLAIAYSLLVDWSAS----QQNRGK 348 >gi|229589365|ref|YP_002871484.1| hypothetical protein PFLU1848 [Pseudomonas fluorescens SBW25] gi|229361231|emb|CAY48095.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 353 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + + F++ + ++ F SWP+ + A I T+ M L +PL++L Sbjct: 20 SFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAGILTLCWMLLVALPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + + G+P P WL IP G +W +L + + + Sbjct: 80 FNLADHVRDATALIKDIQVDGLPAAPTWLGSIPFVGERLVAMWDSIDQQGAALMVSIKPY 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R A G I L+ LS++F+ FFFYRDG ++ + L E L Sbjct: 140 LGQVGNWLLARSAQIGGGI-LELTLSLVFV----FFFYRDGPRLAMFVHRLLERLIGDRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +V ++ G+ A + ++ + +AGVP + LG++T ++++IP G P+ Sbjct: 195 GYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 IAFGFIGLFIGPTLLAV 331 >gi|330959036|gb|EGH59296.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 349 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 11/312 (3%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SAL+ G F SWP+ + + A++ ++ M L PL++L + Sbjct: 25 APFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMSLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + G+P P +WL+ IP G LWT + + +L G Sbjct: 85 HVRDATGLIKNIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMTTVKPYLGEVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R A G I L+ LSI+F FFFYRDG ++ + SL E L + Sbjct: 145 NWLLARSAQIGGGI-LELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ + Sbjct: 200 LVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G A + +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGEYGMAVFMGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLFIGP L+A+ Sbjct: 320 IGLFIGPTLLAV 331 >gi|78222370|ref|YP_384117.1| hypothetical protein Gmet_1154 [Geobacter metallireducens GS-15] gi|78193625|gb|ABB31392.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 358 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 27/329 (8%) Query: 25 YFLKGFFAPVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 Y + +P L++L +IG ++PIY + T A + T + + +VP + Sbjct: 20 YVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTLAAGLMTPATVLTLVVPFVG 79 Query: 81 LFY---------YGMLE--MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L + YG LE + +V++ Q+ V W++ I E +T L Sbjct: 80 LTFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWIARI-------EAYTGPLGF 132 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L E +K + +F+ + + ++ M+I LFF YRDG + + Sbjct: 133 EIDTRFLPE--MKEVAARVLNYSKEIVKNVFI-FSIKLLLMVITLFFIYRDGERVQRHAL 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ L A + ++ V +V+++ G+ + + +G + G +W AG+PS + G I A Sbjct: 190 AV-IPLTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSPLLFGAIMA 248 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+IP G + + +IYLL G + L +WG + + +D +RPF + G KLP Sbjct: 249 VCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFFISGRAKLP 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L G +GG+ + GLLG GP+++AL Sbjct: 309 VLVIAIGGLGGLASFGLLGAVAGPIVLAL 337 >gi|118579221|ref|YP_900471.1| hypothetical protein Ppro_0783 [Pelobacter propionicus DSM 2379] gi|118501931|gb|ABK98413.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 353 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 61/367 (16%) Query: 21 LVSLYFLKGFFAPVLSALI----IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 L+ Y L AP L+ ++ IG S+P+Y +++ AV T V+ I+ Sbjct: 16 LLMCYLLFTILAPFLTTMVWAGTIGAISYPLYDKLLARFRCRENLAAVAMTTLVVLALII 75 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ----- 131 PL+ L + L + LA Q+ + + G S L HPQ Sbjct: 76 PLVGLIF-------TLARETALAYQY-------IEGVTSGQSGS-FMESILRHPQVSPLL 120 Query: 132 -SLKILSETF-----------LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ L+ +F LK G+ + +++ FL + + ++ M+I LFF YR Sbjct: 121 DRIRPLTGSFNLELDSMLLPALK-RGLASLLNYSTGIVKNFLGFLIKLMLMLITLFFIYR 179 Query: 180 DGFSISQQLDSLGEHLFPAYW----------KKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 DG H +W I+ + +V+ + G + + +G + Sbjct: 180 DG-----------RHFLRRFWPVVGIDEKMRATIATTITRVLDAVLYGFLLTCLVQGTLG 228 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G +W+AG+PS G++ + A IP G + + +IYLL +G I L +W A+ Sbjct: 229 GLGFWVAGLPSPFLFGILMTVCAPIPLIGTAMIWMPGAIYLLTQGRILAGVLLMVWSAVA 288 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + +D +RP + G KLP FG++GG+ GL G+ GPV++AL V ++ Sbjct: 289 VSGIDNIIRPLFISGRAKLPIPVVIFGVLGGLLAFGLTGVVAGPVIVALFLVFFES--YG 346 Query: 349 IKENKEK 355 KE E+ Sbjct: 347 EKEMAEE 353 >gi|104782634|ref|YP_609132.1| hypothetical protein PSEEN3611 [Pseudomonas entomophila L48] gi|95111621|emb|CAK16342.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 350 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 29/321 (9%) Query: 32 APVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +SAL I+ F SWP+ T A + T + L +PL++L + Sbjct: 25 APFISALLWGAILAFASWPLMRLLTRLLGGRETLAASLLTTVWILLVALPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP--GGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ + V G+P P W+ IP GG S W +L ++ +L Sbjct: 85 HIRDATAFVRDVQVDGLPDAPAWVGSIPFVGGRLVS-WWESLDQQGAALLASAKPYLGQV 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL--------GEHLF 196 G + R +++ G L+ LS++F+ FFFYRDG ++ + L E+ Sbjct: 144 GNWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLAAFVHRLLHRLVGERAEYYV 198 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + R+V VI + + IG + +AGVP + LG++T ++++IP Sbjct: 199 DLVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGAIVLGLVTFMLSLIPM 250 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G P+++ + +L+ KG+ A L +WG + VD L+P+L+ LP + G+ Sbjct: 251 GPPLAWIPATAWLVSKGDYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGV 310 Query: 317 VGGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 311 FGGLIAFGFIGLFIGPTLLAV 331 >gi|110835489|ref|YP_694348.1| hypothetical protein ABO_2628 [Alcanivorax borkumensis SK2] gi|110648600|emb|CAL18076.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 373 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 36/371 (9%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR++ + + R + ++ VS F ++ FFAP+ A I +P++ +++ Sbjct: 1 MRDSGILEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPLHKRLLARWPT 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDI--- 113 +A+ + + L ++P+L + + E L KV Q G I + ++ + Sbjct: 61 RRNLVALFTLMLCVVLVVIPVLAVATSFVTEGVGLFQKV----QSGEIDLASYVDKVKHA 116 Query: 114 -PGGMWASELWTKHLSH--PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 PG +E + L Q++K T F+ + A G + L++ M Sbjct: 117 FPGVQSLAERFDVDLEKIKEQAVKAF------TGAGQFLAKRALAVGQNTFQFFLNLGLM 170 Query: 171 IIALFFFYRDGFSISQQL-------DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + FF RDG S+ L D E LF + +V R+T G ++AI Sbjct: 171 LYLAFFLIRDGDSMVAMLIRALPLGDEREELLFAKF--------AEVTRATIKGNLLVAI 222 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLF 282 +G + G +W G+P + GV+ A++++IP GA + + V++YL G++ AT L Sbjct: 223 TQGALGGLIFWWLGIPGALLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATVLI 282 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+G + +VD LRP LVG KLP F +GG+ G+ G +GP+L AL W Sbjct: 283 LFGVFVIGLVDNILRPILVGRDTKLPDYVVLFSTLGGLAMFGITGFAVGPLLAALFVAFW 342 Query: 343 KESIMAIKENK 353 I E Sbjct: 343 GIFIREFNEED 353 >gi|152980908|ref|YP_001355199.1| hypothetical protein mma_3509 [Janthinobacterium sp. Marseille] gi|151280985|gb|ABR89395.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 359 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 3/215 (1%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G +FI + A G ++ +S M+ LFF RDG I+ ++ L P + + + Sbjct: 142 QGSEFITKQAISIGQNTFNFLISFTIMLYMLFFLLRDGDKIAARIRQ-AAPLNPDHKRTL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + IR+T G I+A +G + G A+W GV + GV+ A ++++P GA + + Sbjct: 201 FNNLTTAIRATVKGNIIVAAVQGALGGVAFWFLGVQGALLWGVLMAFLSLLPAVGAALIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+IY L+ G I+ L +G + + +VD LRP LVG LP VGG+ Sbjct: 261 VPVAIYFLLTGAIWQGVTLIAFGVLVIGLVDNILRPILVGKDTALPDFVVLISTVGGMAL 320 Query: 323 MGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKI 356 +GL G IGPV+ AL +W S K+ EK+ Sbjct: 321 LGLNGFVIGPVIAALFMTLWDIFSSGKQKQEAEKL 355 >gi|58038558|ref|YP_190522.1| hypothetical protein GOX0069 [Gluconobacter oxydans 621H] gi|58000972|gb|AAW59866.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 161/334 (48%), Gaps = 18/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + +L A I+ FT+WPIY ++ A+ +VPL L G+ ++ Sbjct: 26 FLSAILWAAILAFTTWPIYRRM--RRHVRPALAALAMMALSALFIVVPLAVLTSAGISDI 83 Query: 90 KELVSKV---VLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +S++ +L P P WL+ IP G W H SH + + L+ Sbjct: 84 PGTISEIDTLILHVTSANPPPAWLNRIPMAGPHLVNAW-HHFSH--DVGAFATEVLR--- 137 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQLDSLGEHLF-PAYWK 201 + + A + L + +++ALF F + +G ++ + +L + + P Sbjct: 138 -PYAGQIAHLTLTVLLRLAGGLAELVMALFVAFFLWLNGDTLGNTITALIDRIAGPHTTP 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ I+ + +R T G+ A+ +G++ G LAGVPS V L ITA +A+ P GAP+ Sbjct: 197 RLINIIGRTVRGTVYGILGTALIQGVLTGIGLMLAGVPSPVLLAGITAFVAVFPIGAPLV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +I+L + + + L ++G + + D +RP + +LP+L T G++GG+ Sbjct: 257 WVPAAIWLGMTHHFGHGLFLAIYGILIISGADHVIRPAFIARGAQLPYLLTVLGVLGGIV 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 T G +G+F+GPVL+A+ + E A ++E+ Sbjct: 317 TFGGVGIFLGPVLLAVGYTLTSE-FAAGPHHRER 349 >gi|89900931|ref|YP_523402.1| hypothetical protein Rfer_2147 [Rhodoferax ferrireducens T118] gi|89345668|gb|ABD69871.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 357 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 10/186 (5%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDS-----LGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L + F ++ FF + DG + +QL LG + AY+K + R+ G+ Sbjct: 163 ALRLFFALLTSFFLFLDGDQMLEQLRGVLYGLLGNRVH-AYFKAVG----DTTRAVVYGL 217 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 + A+ +GL+ G YW GV + G TA++A+IP GAP + ++ +LL+KG I Sbjct: 218 LLAALAQGLLAGLGYWAVGVRAPAFWGAATAVVALIPFGAPAIWGSIGAWLLLKGQISAG 277 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L LWGA+ + +D +RP ++ G K+PFL FG++GG+ GL+GLF+GPV++A++ Sbjct: 278 VGLLLWGALAVSWIDNLVRPLVISGVAKIPFLLVLFGVLGGLVAFGLIGLFVGPVILAIL 337 Query: 339 AVIWKE 344 +W+E Sbjct: 338 LALWRE 343 >gi|330980752|gb|EGH78855.1| hypothetical protein PSYAP_19606 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 348 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 20 CLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + G+P P +WL+ IP G LWT + + Sbjct: 80 FNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPH 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G ++I +++ G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 140 LGQVG-NWILARSAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGERA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ Sbjct: 195 QYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 LAFGFIGLFIGPTLLAV 331 >gi|66045269|ref|YP_235110.1| hypothetical protein Psyr_2029 [Pseudomonas syringae pv. syringae B728a] gi|302187399|ref|ZP_07264072.1| hypothetical protein Psyrps6_13658 [Pseudomonas syringae pv. syringae 642] gi|63255976|gb|AAY37072.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] gi|330973446|gb|EGH73512.1| hypothetical protein PSYAR_23439 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 348 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 20 CLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + G+P P +WL+ IP G LWT + + Sbjct: 80 FNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPH 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G ++I +++ G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 140 LGQVG-NWILARSAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGERA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ Sbjct: 195 QYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 LAFGFIGLFIGPTLLAV 331 >gi|330987461|gb|EGH85564.1| putative lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 349 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 11/312 (3%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SALI G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + G+P P +WL+ IP G LWT + + L G Sbjct: 85 HVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R +++ G L+ LSI+F FFFYRDG ++ + SL E L + Sbjct: 145 NWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGERAQYYLD 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ + Sbjct: 200 LVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLFIGP L+A+ Sbjct: 320 IGLFIGPTLLAV 331 >gi|289679981|ref|ZP_06500871.1| hypothetical protein PsyrpsF_42172 [Pseudomonas syringae pv. syringae FF5] Length = 348 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 20 CLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + G+P P +WL+ IP G LWT + + Sbjct: 80 FNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPH 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G ++I +++ G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 140 LGQVG-NWILARSAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGERA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ Sbjct: 195 QYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 LAFGFIGLFIGPTLLAV 331 >gi|330875659|gb|EGH09808.1| hypothetical protein PSYMP_10962 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 348 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 20 CLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + G+P P +WL+ IP G LWT + + Sbjct: 80 FNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPH 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R +++ G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 140 LGQVGNWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ Sbjct: 195 QYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 LAFGFIGLFIGPTLLAV 331 >gi|257486360|ref|ZP_05640401.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628087|ref|ZP_06461041.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646709|ref|ZP_06478052.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] gi|320324915|gb|EFW80987.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. B076] gi|320329281|gb|EFW85278.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867463|gb|EGH02172.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331010639|gb|EGH90695.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 349 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 11/312 (3%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SALI G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + G+P P +WL+ IP G LWT + + L G Sbjct: 85 HVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R +++ G L+ LSI+F FFFYRDG ++ + SL E L + Sbjct: 145 NWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ + Sbjct: 200 LVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLFIGP L+A+ Sbjct: 320 IGLFIGPTLLAV 331 >gi|330888175|gb|EGH20836.1| putative lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 349 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 11/312 (3%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SALI G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + G+P P +WL+ IP G LWT + + L G Sbjct: 85 HVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R +++ G L+ LSI+F FFFYRDG ++ + SL E L + Sbjct: 145 NWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ + Sbjct: 200 LVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGEYGMAIFLGIWGIFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLFIGP L+A+ Sbjct: 320 IGLFIGPTLLAV 331 >gi|296116208|ref|ZP_06834826.1| hypothetical protein GXY_10439 [Gluconacetobacter hansenii ATCC 23769] gi|295977314|gb|EFG84074.1| hypothetical protein GXY_10439 [Gluconacetobacter hansenii ATCC 23769] Length = 357 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/318 (25%), Positives = 158/318 (49%), Gaps = 23/318 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + +L A I+ F++WPIY ++ + A+ TV + +VPL + G++E+ Sbjct: 25 FMSALLWAAILTFSTWPIYVRL--RRHTNPLIAALGMTVMSAVVMVVPLTLVVSSGIVEL 82 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSETFLKTNGID 147 + + + + I +P + +W +H+ H PQ + + + ID Sbjct: 83 PQTLPDAIDSITTVIHLP-----------SLPVWLQHIPHLGPQMNETWEKWRVDVGNID 131 Query: 148 FIPR-FASRF------GMIFLDYCLSIIFMIIAL-FFFYRDGFSISQQLDSLGEHLFPAY 199 + R ++ R G++ L L+ + M + + FFF+ G ++ S+ + Y Sbjct: 132 QMIRPYSGRLVQWALGGIMQLASGLAHLGMALFMAFFFWLGGEALGATFVSVVRRIAGGY 191 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I I+ + IR T G+ A+ +G++ G + +AG+ + V G ITA ++++P GAP Sbjct: 192 ADRILGIIGRTIRGTVYGIIGTALLQGVLTGIGFAIAGIANPVLWGGITAFISVLPIGAP 251 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L + + L L+G I + D +RP + +LP+L T G++GG Sbjct: 252 LIWIPAAFFLFVAHHPGWGVFLLLYGTIIVSGADHIMRPMFIARGAQLPYLLTVLGVLGG 311 Query: 320 VRTMGLLGLFIGPVLMAL 337 + T G LG+F+GPVL+ + Sbjct: 312 IWTFGGLGIFLGPVLIGV 329 >gi|71734505|ref|YP_274223.1| putative lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555058|gb|AAZ34269.1| lipoprotein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 349 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 11/312 (3%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SALI G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALIWGAVLAFASWPLMRLLNRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + G+P P +WL+ IP G LWT + + L G Sbjct: 85 HVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R +++ G L+ LSI+F FFFYRDG ++ + SL E L + Sbjct: 145 NWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ + Sbjct: 200 LVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLFIGP L+A+ Sbjct: 320 IGLFIGPTLLAV 331 >gi|90423586|ref|YP_531956.1| hypothetical protein RPC_2083 [Rhodopseudomonas palustris BisB18] gi|90105600|gb|ABD87637.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 356 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 157/336 (46%), Gaps = 14/336 (4%) Query: 16 IMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ ++++SL F L F+ +L ++I P+ + + T A+I + ++ Sbjct: 11 LLLVVVISLAFGWILWPFYGAILWGVVIAVVFAPLSRRLAALMPQRPTLAALITLLIIVF 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH--LS 128 + I+PL + E + K+ + + R ++ + WA+ L ++ S Sbjct: 71 IVILPLTLVVASLAQEAASVYEKI---QSKDLDLVRSFQEVLNVLPSWATSLLERYGLAS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 LS LK G FI A G D+ L + MI LFF RD ++S+++ Sbjct: 128 LGAVQDKLSAGLLK--GSQFIATQALNVGQSTFDFVLELFIMIYLLFFLLRDEAALSRRI 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L P K + V+R+ G ++A+ +G + G +W G+ + + V+ Sbjct: 186 RT-AIPLRPEQQKALLNKFTVVVRAMIKGNMLVALLQGALGGLMFWFLGISASLLWAVLM 244 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P GA + + V+IYLL G+I+ L +GA+ + +VD LRP LVG K+ Sbjct: 245 AFLSLLPAVGAGLIWGPVAIYLLAIGSIWKGVLLIAYGALVIGLVDNILRPILVGKDTKM 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ G+ G IGPV+ AL +W Sbjct: 305 PDYIVLISTLGGIEVFGINGFVIGPVIAALFIAVWD 340 >gi|326316808|ref|YP_004234480.1| hypothetical protein Acav_1999 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373644|gb|ADX45913.1| protein of unknown function UPF0118 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 36/360 (10%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M+ T+L R I +I VSL FL F V +I+ P++ + Sbjct: 1 MKTTLLQN----RTFIALLIAVSLAFLAILWPFHGAVFWGIILAILFAPMHRRLLRYMPR 56 Query: 58 SSTFLAVIATVSVMCLFIVPL-LFLFYYGMLEMKELVSKVVLANQ-------HGI--PVP 107 + LA + T+S +CL +V L + L +++ LV + + + Q H + +P Sbjct: 57 RAN-LAALCTLS-LCLLVVILPMTLITVSLVQEASLVYERIRSGQLDFTAYFHQVMQAMP 114 Query: 108 RWLSDIPGGM---WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 W I + ASEL + S+ + + F+ + IDF G L + Sbjct: 115 SWAMQILDRLNLTTASELQARL----SSVTVQATQFVGSKAIDF--------GQNTLQFV 162 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 +S M+ LFF RDG +++ ++ L + ++++ VIR+T G +A Sbjct: 163 VSFGIMLYLLFFLLRDGPALAARIRE-ATPLDEGHKRQLATKFTTVIRATVKGNIAVAAA 221 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 +G + G A+W G+ + V GV+ A ++++P GA + + V+IYLL G ++ L Sbjct: 222 QGALGGLAFWFLGIQAPVLWGVLMAFLSLLPAVGAGLIWAPVAIYLLATGAVWQGAGLAA 281 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +G + +VD LRP LVG K+P +GG+ GL G IGPV+ AL W Sbjct: 282 FGIGVIGLVDNVLRPVLVGKDTKMPDYIVLISTLGGMSLFGLTGFVIGPVIAALFIATWD 341 >gi|330951703|gb|EGH51963.1| hypothetical protein PSYCIT7_10049 [Pseudomonas syringae Cit 7] Length = 348 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 7/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 20 CLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + G+P P +WL+ IP G LWT + + Sbjct: 80 FNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPH 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + R +++ G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 140 LGQVGNWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGEGA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ Sbjct: 195 QYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLFIGP L+A+ Sbjct: 315 LAFGFIGLFIGPTLLAV 331 >gi|66046439|ref|YP_236280.1| hypothetical protein Psyr_3210 [Pseudomonas syringae pv. syringae B728a] gi|63257146|gb|AAY38242.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] Length = 354 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQ----QK 197 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 198 RRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFMSSW 340 >gi|28869423|ref|NP_792042.1| lipoprotein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852664|gb|AAO55737.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|331016291|gb|EGH96347.1| lipoprotein, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 349 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 27/320 (8%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SAL+ G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + + G+P P +WL+ IP G LWT + + +L G Sbjct: 85 HVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGLWTTIDQQGAAFMTTVKPYLGEVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYW-- 200 + R A G I L+ LSI+F FFFYRDG ++ + SL E L Y+ Sbjct: 145 NWLLARSAQIGGGI-LELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 201 ---KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AG+P + LG++T + ++IP G Sbjct: 200 LVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGIPGALVLGILTFLFSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + + +L+ +G A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|121603896|ref|YP_981225.1| hypothetical protein Pnap_0987 [Polaromonas naphthalenivorans CJ2] gi|120592865|gb|ABM36304.1| protein of unknown function UPF0118 [Polaromonas naphthalenivorans CJ2] Length = 394 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 19/307 (6%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-I 104 PI+ F+SK + T A+ ++ L I+P+ + E + +V Q G + Sbjct: 82 PIFLRFMSKLSQRRTLSALFTVSIILVLVILPVGLISALLTQEAAGVYQRV----QSGDL 137 Query: 105 PVPRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIF 160 R+ I + W + L + S +L ++ E T G FI A G Sbjct: 138 SFGRYFQQIYDALPAWITSLLNR--SGLNNLGLIQERVSDSLTKGSQFIATQALNIGQNA 195 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLG 217 D+ +S M+ +FFF RDG ++S+++ L E + + K + VIR+T G Sbjct: 196 FDFFVSFFIMLYLMFFFLRDGAALSRRIKQAIPLEEDIKRNLFSKFT----TVIRATVRG 251 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A+ +G + G +W + + V G + A ++++P GA + + V+IY L G I+ Sbjct: 252 NIAVAVMQGALGGLIFWFLNIHAPVLWGTLMAFLSLLPAVGAALVWIPVAIYFLATGAIW 311 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L +G + + +VD LRP LVG K+P +GG+ GL G IGPV+ A Sbjct: 312 QGVVLIAFGVLVIGLVDNVLRPVLVGKDTKMPDYVVLVSTIGGMSLFGLNGFVIGPVIAA 371 Query: 337 LIAVIWK 343 + W Sbjct: 372 MFMAAWD 378 >gi|330972921|gb|EGH72987.1| hypothetical protein PSYAR_20762 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 354 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFMSSW 340 >gi|307320954|ref|ZP_07600362.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306893438|gb|EFN24216.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] Length = 371 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 163/333 (48%), Gaps = 8/333 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + +L A +I F++WP Y F A TV V+ + + PL L + Sbjct: 31 FLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLALLATTLADNI 90 Query: 90 KELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 LV+ V + G P P W+ ++P G + W + L+H + + D Sbjct: 91 SSLVAGVTHVLEQGPPAPPDWVRELPIAGEGLATYW-EGLAHNAPAFTIELKKVIGPFAD 149 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + FG L+ LSI FF + G ++ + E + A +++ +V Sbjct: 150 VALIGGTLFGAGLLELALSIFIG----FFLFLHGRRMTALTRQIAERVAGARARRLLSVV 205 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G P + V++ Sbjct: 206 GVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPFVWGPVAL 265 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L ++ +++ + +WG + + +D LRP+L+G LP L FGL+GGV GL+G Sbjct: 266 WLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGVLAFGLIG 325 Query: 328 LFIGPVLMALIAVIWKESIMA-IKENKEKISSN 359 LF+GP L+A+ +++E I A ++E ++ SS+ Sbjct: 326 LFLGPTLLAVAHSLFREWIAAELEERRQPPSSS 358 >gi|330428771|gb|AEC20105.1| hypothetical protein PT7_1565 [Pusillimonas sp. T7-7] Length = 353 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 8/216 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYW 200 G ++ A G + +S+ M+ LFF RDG S+++ +HL P + Sbjct: 142 EGSKYLASQAVNVGQNTFQFLISMGIMLYLLFFLLRDGGSLARH----SKHLIPLSEEHK 197 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + R V+R+T G ++A +G + G +W G+ + GV+ A ++++P GA Sbjct: 198 QHLFRKFATVVRATVKGNIVVAATQGTLGGLMFWFLGIQGALLWGVLMAFLSLLPAVGAA 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G ++ L L+G + + +VD LRP LVG K+P +GG Sbjct: 258 IIWVPVAVYFLVTGAVWQGVTLTLFGVLVIGLVDNILRPLLVGKDTKIPDYVILVSTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + GL G IGP+ AL W AI+ N E+ Sbjct: 318 LAVFGLNGFVIGPLFAALFIACWDLFPSAIRMNHEE 353 >gi|189426238|ref|YP_001953415.1| hypothetical protein Glov_3189 [Geobacter lovleyi SZ] gi|189422497|gb|ACD96895.1| protein of unknown function UPF0118 [Geobacter lovleyi SZ] Length = 361 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 174/347 (50%), Gaps = 17/347 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T+L + +++ + L+ FL F AP+ ALIIG ++P Y + ++ Sbjct: 1 MDRTLLKTLLVFTLILLGVYLLGKIFLP-FLAPIAWALIIGIITYPAYLRLLDLLKQREA 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A + T++VM +F++P++ L E+ + + V ++ + L WA Sbjct: 60 WSAALMTLAVMLVFVLPVVSLVSVLAQEVAQ-AYQFVSSSVSSGGAEKLLQQ-----WAG 113 Query: 121 E-LWTKHLSHPQSLK-----ILSETFLKTN--GIDFIPRFASRFGMIFLDYCLSIIFMII 172 + W ++ ++L L+++ + + G+ + F + + + ++FM+ Sbjct: 114 QPQWAPYVDKFKTLVGGSSFSLTDSVMANSKEGLAKLLGFLTSLLANSFSFLMDMVFMLF 173 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 LFF Y DG + L+ + L + +K+S++V V+ G + + +G++ G+A Sbjct: 174 ILFFVYLDGERVLLWLNRM-LPLEESLQEKLSQVVRDVLSGFIFGTLLTCLVQGILAGAA 232 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 Y L GVPS + L V+TAI +IP G + + ++YL ++G+ A + LWG + + + Sbjct: 233 YLLFGVPSPLLLAVLTAIGGLIPVVGTALIWLPAALYLYLQGSAVKAVIMILWGFLAVGM 292 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 D ++P + + LP LP G +GG+ G+LG GP+L+A++ Sbjct: 293 SDNVVKPIFMSSRVTLPILPIMIGALGGLAAFGVLGAIFGPLLLAIL 339 >gi|330965376|gb|EGH65636.1| lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 349 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 27/320 (8%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SAL+ G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + + G+P P +WL+ IP G +WT + + +L G Sbjct: 85 HVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGVWTTIDQQGAAFMTTVKPYLGEVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYW-- 200 + R A G I L+ LSI+F FFFYRDG ++ + SL E L Y+ Sbjct: 145 NWLLARSAQIGGGI-LELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 201 ---KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AG+P + LG++T + ++IP G Sbjct: 200 LVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGIPGALVLGILTFLFSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + + +L+ +G A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|77459939|ref|YP_349446.1| hypothetical protein Pfl01_3717 [Pseudomonas fluorescens Pf0-1] gi|77383942|gb|ABA75455.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 353 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 132 SLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L L E +K G + A FG ++ +S M+ LFFF RDG +++++ Sbjct: 128 ELNALREKIVKAAMQGSQVLASQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGAELARKVR 187 Query: 190 S---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L EH + +++ +V+R+T G ++AI +G + G+ +W +PS + V Sbjct: 188 TAIPLEEH----HKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALLWAV 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA I + V++Y L+ G I+ L L+G + +VD LRP LVG Sbjct: 244 LMAFLSLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++P +GG+ GL G IGP++ AL W I E+K K+ Sbjct: 304 RMPDYMILISTLGGLAVFGLNGFVIGPLIAALFMSSWALFI----ESKPKVQ 351 >gi|37522328|ref|NP_925705.1| hypothetical protein glr2759 [Gloeobacter violaceus PCC 7421] gi|35213328|dbj|BAC90700.1| glr2759 [Gloeobacter violaceus PCC 7421] Length = 368 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 20/312 (6%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF---------YYGMLEMKELVS 94 SWP+Y ++ S + A+ T+ V I+P++ + Y ++ +S Sbjct: 41 SWPLYQKVYEILDKRSIYAALAMTLLVSLSVILPVVLIAASLASDAVELYRTVQADGSMS 100 Query: 95 KVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 L + + R ++ +P GG + W + + Q + L +G I + Sbjct: 101 LAALKESYA-ALGRTVARVPVVGGQLQN--WLREVDLVQVQQWLR------SGAGRILTW 151 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + FG +++ I LFF Y G + +Q E L + + +R Sbjct: 152 LAGFGQAISGALVTLGLTIFTLFFLYLSGLDLVRQTREALEKLGGEPLVSLLDPLGATVR 211 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + LG+ + +GL+ G W+AG+ + LGV+ A+++++ P+ + I+L Sbjct: 212 AVVLGLVLTGAAQGLLAGLGLWVAGIEIALILGVLAALLSILQIPTPVVWFPCVIWLAAN 271 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G + A LFLWGA+ + +D L+P + +P L FFG++GG+ G +G+ +GP Sbjct: 272 GQTWQAVALFLWGALVVGTIDNFLKPLFISQGTGIPILLVFFGVLGGLLAFGTIGIVVGP 331 Query: 333 VLMALIAVIWKE 344 V +AL+ V+W+ Sbjct: 332 VSLALLLVLWRR 343 >gi|307315631|ref|ZP_07595168.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306898698|gb|EFN29361.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 371 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 161/333 (48%), Gaps = 8/333 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + L A +I F++WP Y F A TV V+ + + PL L + Sbjct: 31 FLSATLGAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLALLATTLADNI 90 Query: 90 KELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 LV+ V + G P P W+ +P G + W + L+H + + D Sbjct: 91 SSLVAGVTNVLEQGPPAPPDWVRGLPIAGEGLATYW-EGLAHNAPAFTIELKKVIGPFAD 149 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + FG L+ LSI FF + G ++ + E + A +++ +V Sbjct: 150 VALIGGTLFGAGLLELALSIFIG----FFLFLHGRRMTALTRQIAERVAGARARRLLSVV 205 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G P + V++ Sbjct: 206 GVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPFVWGPVAL 265 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L ++ +++ + +WG + + +D LRP+L+G LP L FGL+GGV GL+G Sbjct: 266 WLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGVLAFGLIG 325 Query: 328 LFIGPVLMALIAVIWKESIMA-IKENKEKISSN 359 LF+GP L+A+ +++E I A ++E ++ SS+ Sbjct: 326 LFLGPTLLAVAHSLFREWIAAELEERRQPPSSS 358 >gi|330981355|gb|EGH79458.1| hypothetical protein PSYAP_22717 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 354 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFMSSW 340 >gi|213968162|ref|ZP_03396307.1| lipoprotein [Pseudomonas syringae pv. tomato T1] gi|301383833|ref|ZP_07232251.1| lipoprotein, putative [Pseudomonas syringae pv. tomato Max13] gi|302133398|ref|ZP_07259388.1| lipoprotein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927142|gb|EEB60692.1| lipoprotein [Pseudomonas syringae pv. tomato T1] Length = 349 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 148/320 (46%), Gaps = 27/320 (8%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SAL+ G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + + G+P P +WL+ IP G WT + + +L G Sbjct: 85 HVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGFWTTIDQQGAAFMTTVKPYLGEVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYW-- 200 + R A G I L+ LSI+F FFFYRDG ++ + SL E L Y+ Sbjct: 145 NWLLARSAQIGGGI-LELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 201 ---KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AG+P + LG++T + ++IP G Sbjct: 200 LVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGIPGALVLGILTFLFSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + + +L+ +G A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|148546943|ref|YP_001267045.1| hypothetical protein Pput_1705 [Pseudomonas putida F1] gi|148511001|gb|ABQ77861.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 349 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 27/320 (8%) Query: 32 APVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +SAL I+ F SWP+ T A + T++ + + +PL++L + Sbjct: 25 APFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILIVALPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + V G+P P WL IP G W +L + + G Sbjct: 85 HIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGWQSLDQQGAALLTSIKPYFGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS--------QQLDSLGEHLFP 197 + R +++ G L+ LS++F+ FFFYRDG ++ + + E+ Sbjct: 145 NWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLAAFVLRLLHRLVGERAEYYLD 199 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AGVP + LG++T ++++IP G Sbjct: 200 LVAATVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGAIVLGLVTFMLSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+++ + +L+ KG A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|237797235|ref|ZP_04585696.1| hypothetical protein POR16_00180 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020085|gb|EGI00142.1| hypothetical protein POR16_00180 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 354 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G++ G +W +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGMLGGFIFWALDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVILGLFGVFVIGLVDNVLRPVLVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLIAALFISSW 340 >gi|16262687|ref|NP_435480.1| hypothetical protein SMa0447 [Sinorhizobium meliloti 1021] gi|14523310|gb|AAK64892.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 373 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 8/333 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + +L A +I F++WP Y F A TV V+ + + PL L + Sbjct: 33 FLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLALLATTLADNI 92 Query: 90 KELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 LV+ V + G P P W+ +P G + W + L+H + + D Sbjct: 93 SSLVAGVTHVLEQGPPAPPDWVRGLPIAGEGLATYW-EGLAHNAPAFTIELKKVIGPFAD 151 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + FG L+ LSI FF + G ++ + E + A +++ +V Sbjct: 152 VALIGGTLFGAGLLELALSIFIG----FFLFLHGRRMTALTRQIAERVAGARARRLLSVV 207 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G P + V++ Sbjct: 208 GVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPFVWGPVAL 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L ++ +++ + +WG + + +D LRP+L+G LP L FGL+GGV GL+G Sbjct: 268 WLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGVLAFGLIG 327 Query: 328 LFIGPVLMALIAVIWKESIMA-IKENKEKISSN 359 LF+GP L+A+ +++E I A ++E ++ SS+ Sbjct: 328 LFLGPTLLAVAHSLFREWIAAELEERRQPPSSS 360 >gi|330944584|gb|EGH46538.1| hypothetical protein PSYPI_31203 [Pseudomonas syringae pv. pisi str. 1704B] Length = 354 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQ----QK 197 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 198 RRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFMSSW 340 >gi|71737762|ref|YP_275294.1| hypothetical protein PSPPH_3124 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485456|ref|ZP_05639497.1| hypothetical protein PsyrptA_19480 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71558315|gb|AAZ37526.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323803|gb|EFW79887.1| hypothetical protein PsgB076_15967 [Pseudomonas syringae pv. glycinea str. B076] gi|320327942|gb|EFW83947.1| hypothetical protein PsgRace4_21198 [Pseudomonas syringae pv. glycinea str. race 4] gi|330881164|gb|EGH15313.1| hypothetical protein Pgy4_19969 [Pseudomonas syringae pv. glycinea str. race 4] gi|330889643|gb|EGH22304.1| hypothetical protein PSYMO_12697 [Pseudomonas syringae pv. mori str. 301020] gi|330989763|gb|EGH87866.1| hypothetical protein PLA107_32388 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010711|gb|EGH90767.1| hypothetical protein PSYTB_13666 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 354 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 20/351 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M ET L + +IM ++LV++ F L F+ V A+I+G P+ K Sbjct: 1 MNETTLQ----YKTLIMLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNW 56 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S ++ + + I+P++ + + E L V + + +L++ + Sbjct: 57 SRNLTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNV---ETGQLDIAGYLAEFKDLL 113 Query: 118 WASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 S L+ L + K G ++ A FG D+ +S+ M+ L+ Sbjct: 114 PHSIQALLDRLGMGDLEGLRDKITKGAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLY 173 Query: 176 FFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 FF RDG + +++ + LGE K +R+V R+T G ++A+ +G + G Sbjct: 174 FFLRDGQELVRKIRTAFPLGEQQKRRLQLKFTRVV----RATVKGNVVVAVTQGALGGFI 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +W +PS + VI A ++++P GA I + V++Y L+ G I+ L L+G + + Sbjct: 230 FWALDIPSALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 VD LRP LVG K+P +GG+ GL G IGP++ AL W Sbjct: 290 VDNVLRPILVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|298487561|ref|ZP_07005603.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157945|gb|EFH99023.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 354 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 20/351 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M ET L + +IM ++LV++ F L F+ V A+I+G P+ K Sbjct: 1 MNETTLQ----YKTLIMLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNW 56 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S ++ + + I+P++ + + E L V + + +L++ + Sbjct: 57 SRNLTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNV---ESGQLDIAGYLAEFKDLL 113 Query: 118 WASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 S L+ L + K G ++ A FG D+ +S+ M+ L+ Sbjct: 114 PHSIQALLDRLGMGDLEGLRDKITKGAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLY 173 Query: 176 FFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 FF RDG + +++ + LGE K +R+V R+T G ++A+ +G + G Sbjct: 174 FFLRDGQELVRKIRTAFPLGEQQKRRLQLKFTRVV----RATVKGNVVVAVTQGALGGFI 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +W +PS + VI A ++++P GA I + V++Y L+ G I+ L L+G + + Sbjct: 230 FWALDIPSALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 VD LRP LVG K+P +GG+ GL G IGP++ AL W Sbjct: 290 VDNVLRPILVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|302185038|ref|ZP_07261711.1| hypothetical protein Psyrps6_01802 [Pseudomonas syringae pv. syringae 642] Length = 354 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFMSSW 340 >gi|330954547|gb|EGH54807.1| hypothetical protein PSYCIT7_24977 [Pseudomonas syringae Cit 7] Length = 356 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFISSW 340 >gi|313497990|gb|ADR59356.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 350 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 27/320 (8%) Query: 32 APVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +SAL I+ F SWP+ T A + T++ + + +PL++L + Sbjct: 25 APFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILIVALPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + V G+P P WL IP G W +L + + G Sbjct: 85 HIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGWQSLDQQGAALLASIKPYFGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS--------QQLDSLGEHLFP 197 + R +++ G L+ LS++F+ FFFYRDG ++ + + E+ Sbjct: 145 NWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLAAFVLRLLHRLVGERAEYYLD 199 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AGVP + LG++T ++++IP G Sbjct: 200 LVAATVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGAIVLGLVTFMLSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+++ + +L+ KG A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|289625440|ref|ZP_06458394.1| hypothetical protein PsyrpaN_09999 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649278|ref|ZP_06480621.1| hypothetical protein Psyrpa2_16276 [Pseudomonas syringae pv. aesculi str. 2250] gi|330866824|gb|EGH01533.1| hypothetical protein PSYAE_06090 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 354 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 20/351 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M ET L + +IM ++LV++ F L F+ V A+I+G P+ K Sbjct: 1 MNETTLQ----YKTLIMLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNW 56 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S ++ + + I+P++ + + E L V + + +L++ + Sbjct: 57 SRNLTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNV---ETGQLDIAGYLAEFKDLL 113 Query: 118 WASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 S L+ L + K G ++ A FG D+ +S+ M+ L+ Sbjct: 114 PHSIQALLDRLGMGDLEGLRDKITKGAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLY 173 Query: 176 FFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 FF RDG + +++ + LGE K +R+V R+T G ++A+ +G + G Sbjct: 174 FFLRDGQELVRKIRTAFPLGEQQKRRLQLKFTRVV----RATVKGNVVVAVTQGALGGFI 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +W +PS + VI A ++++P GA I + V++Y L+ G I+ L L+G + + Sbjct: 230 FWALDIPSALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 VD LRP LVG K+P +GG+ GL G IGP++ AL W Sbjct: 290 VDNVLRPILVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|26990854|ref|NP_746279.1| hypothetical protein PP_4162 [Pseudomonas putida KT2440] gi|24985865|gb|AAN69743.1|AE016611_1 membrane protein, putative [Pseudomonas putida KT2440] Length = 350 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 27/320 (8%) Query: 32 APVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +SAL I+ F SWP+ T A + T++ + + +PL++L + Sbjct: 25 APFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILIVALPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + V G+P P WL IP G W +L + + G Sbjct: 85 HIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGWQSLDQKGAALLTSIKPYFGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS--------QQLDSLGEHLFP 197 + R +++ G L+ LS++F+ FFFYRDG ++ + + E+ Sbjct: 145 NWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLAAFVLRLLHRLVGERAEYYLD 199 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AGVP + LG++T ++++IP G Sbjct: 200 LVAATVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGAIVLGLVTFMLSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+++ + +L+ KG A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|330810817|ref|YP_004355279.1| hypothetical protein PSEBR_a3885 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378925|gb|AEA70275.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 10/217 (4%) Query: 132 SLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +L L + +K+ G +F A FG + +S MI LFFF RDG + +++ Sbjct: 128 NLNGLRDKIVKSAMQGSEFFATQAFSFGQGTFQFLVSFFVMIYLLFFFLRDGAELVRKVR 187 Query: 190 S---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L EH +++ +V+R+T G ++AI +G + G +W+ G+P+ + V Sbjct: 188 TAVPLAEH----QKRRLQLKFNRVVRATVKGNLLVAISQGALGGLIFWILGIPTVLPWAV 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA + + V++Y L+ G I+ L L+G + +VD LRP LVG Sbjct: 244 LMAFLSLLPAVGAGLVWAPVAVYFLLSGAIWQGVVLTLFGVFVIGLVDNFLRPILVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 K+P +GG+ GL G IGP++ AL W Sbjct: 304 KMPDYMVLVSTLGGLAVFGLNGFVIGPLIAALFMSSW 340 >gi|171056705|ref|YP_001789054.1| hypothetical protein Lcho_0013 [Leptothrix cholodnii SP-6] gi|170774150|gb|ACB32289.1| protein of unknown function UPF0118 [Leptothrix cholodnii SP-6] Length = 363 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 116/211 (54%), Gaps = 3/211 (1%) Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL---FFFYRDGFSISQQLDSLGE 193 LK + ++A R I D ++ + +AL FF +RDG + +QL + + Sbjct: 141 DRAALKLQLTELAEQWAGRTLRILGDVGVNALLFGVALVTSFFLFRDGDRLLEQLRRILQ 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L V R+ G+ + A +GL+ G YW+AGV + V G TA++A+ Sbjct: 201 GLLGERVDGYFNAVGDTTRAVVYGLLLAATAQGLMAGLGYWVAGVKAPVFWGAATAVIAL 260 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP GAP+ + ++ ++LL++G + L LWG + + +D +RP ++ G +PFL Sbjct: 261 IPFGAPLVWGSIGLWLLLQGQLGAGIGLLLWGGLAVSWIDNLVRPMVISGVADIPFLLVL 320 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GG+ GL+GLF+GPV++A++ +W+E Sbjct: 321 FGVMGGLAAFGLIGLFVGPVVLAVLLALWRE 351 >gi|28870542|ref|NP_793161.1| hypothetical protein PSPTO_3378 [Pseudomonas syringae pv. tomato str. DC3000] gi|28853790|gb|AAO56856.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 354 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVALYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFLIGPLIAALFISSW 340 >gi|170722651|ref|YP_001750339.1| hypothetical protein PputW619_3487 [Pseudomonas putida W619] gi|169760654|gb|ACA73970.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 354 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 23/325 (7%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L+ + F + +L I+ F SWP+ T A + T + + + +PL++L Sbjct: 24 ALWVMAPFISALLWGAILAFASWPLMRLLTRALGGRETLAAGLLTSAWILIVALPLVWLG 83 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + V G+P P WL IP G W +L + Sbjct: 84 FNLADHVRDATAFVRDVQVDGLPDAPAWLGGIPLVGERLVSGWQSLDQQGAALIASVKPH 143 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS--------QQLDSLG 192 L G + R +++ G L+ LS++F+ FFFYRDG ++ + + Sbjct: 144 LGQVGNWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLAAFVLRLLNRLVGERA 198 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 E+ + R+V VI + + IG + +AGVP + LG++T +++ Sbjct: 199 EYYLELVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGAIVLGLVTFMLS 250 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP G P+++ + +L+ +G A L +WG + VD L+P+L+ LP + Sbjct: 251 LIPMGPPLAWIPATAWLVWQGEYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL 337 G+ GG+ G +GLFIGP L+A+ Sbjct: 311 LLGVFGGLIAFGFIGLFIGPTLLAV 335 >gi|330958144|gb|EGH58404.1| hypothetical protein PMA4326_06145 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 354 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLVAALFISSW 340 >gi|21674815|ref|NP_662880.1| hypothetical protein CT2004 [Chlorobium tepidum TLS] gi|21648033|gb|AAM73222.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 366 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 161/350 (46%), Gaps = 23/350 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M PQ +++ +L+S FL + F +L A I ++P++S FI+ + Sbjct: 1 MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP----RWLSDIPGGM 117 A + V + +PLL +F +L+ L S + + + P R LS +P Sbjct: 61 SASMTLVIFFMMVFLPLLAVFTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLP--- 117 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S+ + + L G + F++ D L IIF +FF Sbjct: 118 ----FYKDIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLVLFIIFWY-TMFFL 172 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYW 234 RDG + +++ ++ P R+ + V R++ G IIA+ +G + G A++ Sbjct: 173 LRDGHELLERI----KYYLPLNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFY 228 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +AG+ V G I A+++++P G+PI + I L + GN A LFL+ +I + +D Sbjct: 229 VAGINQAVFWGAIMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQID 288 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LRP LVG + L FFG +GG+ GL G IGPV+ AL +W Sbjct: 289 NVLRPILVGRDTSMHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWD 338 >gi|319779612|ref|YP_004130525.1| hypothetical protein TEQUI_1468 [Taylorella equigenitalis MCE9] gi|317109636|gb|ADU92382.1| membrane protein, putative [Taylorella equigenitalis MCE9] Length = 387 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 21/209 (10%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSL----GEHLFPAYWKKISRIVPKVIRSTFLGM 218 + + + M+ ++FF RDG +I + + G H + K ++ V+R+T G Sbjct: 162 FIMDLGIMLYLMYFFIRDGETIKEYIKRFTPLSGNHKIKLFSKFLT-----VVRATVKGN 216 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 ++AI +G + G + + G+PS + GVI A ++++P GA + + V+IYLL+ G++ Sbjct: 217 MLVAIAQGALGGFIFAVLGIPSPILWGVIMAFLSLLPAIGAALVWLPVAIYLLVSGSLVE 276 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +WG + + + D LRP LVG +LP +GG+ GL G IGP+L AL Sbjct: 277 GIILMVWGVVVIGMSDNLLRPILVGKDTRLPDYLILITTIGGMAVFGLNGFVIGPLLAAL 336 Query: 338 IAVIWKE-----------SIMAIKENKEK 355 W E + AI+ N E+ Sbjct: 337 FITFWGELPNAVGLLEEDDVAAIESNHEE 365 >gi|213970022|ref|ZP_03398154.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301381377|ref|ZP_07229795.1| hypothetical protein PsyrptM_02033 [Pseudomonas syringae pv. tomato Max13] gi|302062148|ref|ZP_07253689.1| hypothetical protein PsyrptK_19351 [Pseudomonas syringae pv. tomato K40] gi|302130458|ref|ZP_07256448.1| hypothetical protein PsyrptN_03622 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925126|gb|EEB58689.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|330875760|gb|EGH09909.1| hypothetical protein PSYMP_11317 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965579|gb|EGH65839.1| hypothetical protein PSYAC_13156 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017284|gb|EGH97340.1| hypothetical protein PLA106_14651 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 354 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVALYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGP++ AL W Sbjct: 318 MSVFGLNGFVIGPLIAALFISSW 340 >gi|167589269|ref|ZP_02381657.1| hypothetical protein BuboB_28291 [Burkholderia ubonensis Bu] Length = 119 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/116 (44%), Positives = 74/116 (63%) Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 LG AY LAGVP LG++TAI AM+P API F +++L ++G A + G + Sbjct: 1 LGIAYVLAGVPHAALLGLVTAIAAMLPFCAPIVFCGAALWLFVQGATAWAVAVAATGFVV 60 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +F+ + +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ ++W E Sbjct: 61 VFVAEHFVRPVLIGSSARLPFLLVLFGILGGAETFGLLGLFIGPALMTVLTMLWAE 116 >gi|121610898|ref|YP_998705.1| hypothetical protein Veis_3980 [Verminephrobacter eiseniae EF01-2] gi|121555538|gb|ABM59687.1| protein of unknown function UPF0118 [Verminephrobacter eiseniae EF01-2] Length = 352 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 38/348 (10%) Query: 16 IMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +ILV++ F L F V +I+ P + + + T A+ + Sbjct: 12 VLLLILVTIAFGAILWQFHGAVFWGVILAILFAPWHRRLLDRMPGRPTLAALCTLALCLI 71 Query: 73 LFIVPLLFL--------------FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + I+PL + Y G ++ + +V+ A +P W ++ G+ Sbjct: 72 VVILPLAAITVSLAQEATVIYERVYTGQIDFGLYLQQVIAA------LPAWAVNLLDGLH 125 Query: 119 ASEL--WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + W + LS ++ + + FL T ++ G L++ +S M+ LFF Sbjct: 126 LTSVGQWQQRLS---AVAVQASQFLATQALNI--------GQNTLEFIVSFGVMLYLLFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 RDG ++ ++ L P + + + R VIR+T G ++A +G + G +W+ Sbjct: 175 LLRDGPRLALRIGQ-ATPLEPNHKQPLIRNFTTVIRATVKGNIVVAAAQGALGGLIFWVL 233 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+ V GV+ A ++++P GA + + V+IY L G I+ L +G + +VD Sbjct: 234 GIQGPVLWGVLMAFLSLLPAVGAGLIWVPVAIYFLATGAIWQGVVLTAFGVGVIGLVDNI 293 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LRP LVG K+P +GG+ GL+G IGPV+ AL W+ Sbjct: 294 LRPILVGKDTKMPDYIVLISTLGGMALFGLMGFVIGPVIAALFIASWE 341 >gi|83644526|ref|YP_432961.1| permease [Hahella chejuensis KCTC 2396] gi|83632569|gb|ABC28536.1| predicted permease [Hahella chejuensis KCTC 2396] Length = 361 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 18/234 (7%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL----- 188 ++LS+ L G F A FG +L + +S + M+ FFF RDG S+ Q L Sbjct: 131 QMLSQAAL--TGSKFFATQAFNFGQEYLQFTVSFVLMLYLTFFFLRDGGSLIQLLIRALP 188 Query: 189 --DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 D+ HLF + +V R+T G ++AI +G + G +W G+ + GV Sbjct: 189 LGDTREMHLFQKF--------AEVSRATVKGNLVVAIVQGTLGGLIFWALGIKGALLWGV 240 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +++++P G+ + + + YL G++F L L+G + +VD LRP LVG Sbjct: 241 VMVVLSLLPAVGSALVWAPAAAYLFFSGDVFKGVVLVLFGFFVIGLVDNVLRPVLVGRDT 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 K+P +GG+ GL G +GPVL AL W+ + N+EK S+ Sbjct: 301 KMPDYLVLLSTLGGLSLFGLNGFVLGPVLTALFLAFWQIFMEEFNNNEEKSISD 354 >gi|39995960|ref|NP_951911.1| membrane protein [Geobacter sulfurreducens PCA] gi|39982725|gb|AAR34184.1| membrane protein [Geobacter sulfurreducens PCA] gi|298504973|gb|ADI83696.1| membrane protein [Geobacter sulfurreducens KN400] Length = 363 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 27/317 (8%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F AP+ A +IG ++P+Y + A I T +V+ +VP++ L ++ Sbjct: 29 FLAPLGWAAVIGVLTFPLYRKLRAGVGGRELLAAGIMTPAVVITLVVPVVGLTFF----- 83 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID-- 147 ++ + LA Q + R +D G +++ HL HP +I + T + ID Sbjct: 84 --IIQEATLAYQF---LERVAAD-GGEAVLAKIRAHHLIHPWITRIEAYTGPLSLEIDTT 137 Query: 148 FIPRFASRFGMI-----------FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F+P I FL + L II M+IALFF Y DG + +++ ++ L Sbjct: 138 FLPEVKEVAAKILGYSKEAVKNAFL-FILKIILMVIALFFIYLDGERVQRRVLAI-IPLT 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++S V +V+ + G+ + + +G + G +AG+PS V G I A+ A+IP Sbjct: 196 EQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSPVLFGAIMAVCALIPV 255 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + + +IYLL+ G I L +WG + +D +RPF + G KLP L G Sbjct: 256 VGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFFISGKAKLPVLVIAIG 315 Query: 316 LVGGVRTMGLLGLFIGP 332 +GG+ + GLLG IGP Sbjct: 316 GLGGLASFGLLGAVIGP 332 >gi|302058489|ref|ZP_07250030.1| lipoprotein, putative [Pseudomonas syringae pv. tomato K40] Length = 349 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 27/320 (8%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SAL+ G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + + G+P P +WL+ I G WT + + +L G Sbjct: 85 HVRDATALIKDIQVDGLPDPPQWLAGIQLVGERLVGFWTTIDQQGAAFMTTVKPYLGEVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYW-- 200 + R A G I L+ LSI+F FFFYRDG ++ + SL E L Y+ Sbjct: 145 NWLLARSAQIGGGI-LELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 201 ---KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AG+P + LG++T + ++IP G Sbjct: 200 LVAGTVQRVVNGVIGTAAAQALLALIG--------FLIAGIPGALVLGILTFLFSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + + +L+ +G A L +WG + VD L+P+L+ LP + G+ Sbjct: 252 PPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVF 311 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ G +GLFIGP L+A+ Sbjct: 312 GGLLAFGFIGLFIGPTLLAV 331 >gi|23008271|ref|ZP_00049786.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 125 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 1/126 (0%) Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 Y LAGVP V G ITA+ AMIP GAP++F ++ LL G + A + G + F+ Sbjct: 1 YALAGVPHPVLFGAITAVAAMIPFGAPLAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVA 60 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D +RP L+GG +LPFL G++GGV T GLLGLF+GP +MA + ++W++ E Sbjct: 61 DHFVRPVLIGGTTRLPFLWVLLGILGGVETFGLLGLFVGPAVMAALILLWRD-FTGSPEE 119 Query: 353 KEKISS 358 + +S+ Sbjct: 120 RPALSA 125 >gi|254428305|ref|ZP_05042012.1| conserved domain protein, putative [Alcanivorax sp. DG881] gi|196194474|gb|EDX89433.1| conserved domain protein, putative [Alcanivorax sp. DG881] Length = 371 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 48/381 (12%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+T ++ + R + ++ VS F ++ FFAP+ A I +P + +++ + Sbjct: 1 MRDTGISEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPFHKRLLARWPQ 60 Query: 58 SSTFLAVIATVSVMCL-----------FIVPLLFLFYY---GMLEMKELVSKVVLANQHG 103 +A+ + + L F+ + LF G +++ V K+ +H Sbjct: 61 RRNLVALFTLLLCVVLVVIPVLAVATSFVSEGVGLFQKVQSGEIDLASYVDKI----KHA 116 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFL 161 P + L++ L+ + E +K T F+ + A G Sbjct: 117 FPGVQSLAE---------------RFDVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNTF 161 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + L++ M+ FF RDG S+ L LG+ + K + +V R+T G Sbjct: 162 QFFLNLGLMLYLAFFLIRDGDSMVAMLIRALPLGDEREKLLFAKFA----EVTRATIKGN 217 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 ++AI +G + G +W G+P + GV+ A++++IP GA + + V++YL G++ Sbjct: 218 LLVAITQGALGGLIFWWLGIPGALLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKE 277 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 AT L L+G + +VD LRP LVG KLP F +GG+ G+ G +GP+L AL Sbjct: 278 ATILILFGVFVIGLVDNLLRPILVGRDTKLPDYVVLFSTLGGLAMFGITGFAVGPLLAAL 337 Query: 338 IAVIWKESIMAIKENKEKISS 358 W I + N+E +++ Sbjct: 338 FVAFW--GIFIREFNEEGVAA 356 >gi|289679219|ref|ZP_06500109.1| hypothetical protein PsyrpsF_38341 [Pseudomonas syringae pv. syringae FF5] Length = 330 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + LGE Sbjct: 142 QGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQ 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K +R+V R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA Sbjct: 202 LKFTRVV----RATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGP 332 + GL G IGP Sbjct: 318 MSVFGLNGFVIGP 330 >gi|83858202|ref|ZP_00951724.1| hypothetical protein OA2633_01846 [Oceanicaulis alexandrii HTCC2633] gi|83853025|gb|EAP90877.1| hypothetical protein OA2633_01846 [Oceanicaulis alexandrii HTCC2633] Length = 380 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 8/182 (4%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTII 221 L ++ M+ ALFFF G S+++ G L P + +V + IR+T G +I Sbjct: 182 LDLVVMLFALFFFLTRGPSLAEH----GLKLMPMPREDRDLLVERAMSTIRATVKGTFVI 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC 280 AI +G++ G A LAGVP + +T ++++IPG G P+ + I+L+ G+ Sbjct: 238 AIIQGVLTGIALALAGVPGALFWATVTTVLSVIPGIGPPLVWGPAGIWLIASGHYVAGGL 297 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L WGA+ + ++D LRP LVG KLP L +GG+ G +G+ +GP++ AL + Sbjct: 298 LIAWGALVVGLIDNLLRPRLVGQDAKLPDLMILISTLGGLTLFGAVGIIVGPMIAALFSS 357 Query: 341 IW 342 IW Sbjct: 358 IW 359 >gi|258592868|emb|CBE69177.1| conserved membrane protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 378 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 147/318 (46%), Gaps = 23/318 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +P+ A+I+ P+Y + + S A++ T++V+ ++P + G + Sbjct: 43 FASPIFWAVILVVVFQPVYRRLLHRLGGKSGLAALLLTIAVIAAVMIPAIL---SGWVLT 99 Query: 90 KELVSKVVLA----NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS---LKILSETFLK 142 +E VS A Q G+ ++ P M LW + +S P + + + Sbjct: 100 QEAVSFYQAAERVYQQEGLA---GIASHPAVMAGRVLWDR-VSLPFTRLGFDLNALLLGG 155 Query: 143 TNGID-FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS---QQLDSLGEHLFPA 198 + FI + L + +++ + FF RDG +I Q++ L A Sbjct: 156 LGAVSSFIVDNLKGIAINLLSFTVNLFLAVFTFFFLLRDGEAIVYSLQRILPLERKHAEA 215 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + ++ V V+R T + A+ +G++ G YW GVP V LG+ TA+ +++P GG Sbjct: 216 LFSRLYEAVSAVVRGTI----VTALAQGILGGVGYWAVGVPYPVFLGLATALFSLLPVGG 271 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + + + YL ++G L W + + D L+P L+ G LP L FFG++ Sbjct: 272 SAVIWIPAAFYLFLEGGWIRGLLLLAWSTVVVSTADNVLKPALISGGTNLPTLFLFFGML 331 Query: 318 GGVRTMGLLGLFIGPVLM 335 GG++ G+LG +GPVL+ Sbjct: 332 GGLQVFGILGFILGPVLL 349 >gi|94971052|ref|YP_593100.1| hypothetical protein Acid345_4026 [Candidatus Koribacter versatilis Ellin345] gi|94553102|gb|ABF43026.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 360 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 15/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F PV A++I P+Y + +K+ +++FL +I ++++ + L+ + Sbjct: 29 FIKPVAFAIVIAVVFNPLYQRLLKRTKRPGTASFLTIIVFITLLAIPASFLVVTATRQAM 88 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ VS+ A+ P +S P L P LK E L Sbjct: 89 DVGHRVSETTTAHGGVAPTIERVSAKPLATLGRYLRIP----PSELKQRIEDKLNVWAGR 144 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI- 206 + + + +F S I +I +FF +RDG + + +D + P +++ RI Sbjct: 145 MMSQSGALLANLFSLLANSFI-ALITVFFLFRDGERVIEGMD----RVLPITKEQLQRIL 199 Query: 207 --VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + I + GM + +G + V S + LG++ A+ ++IP G + + Sbjct: 200 NGISNSIVANVYGMAAVGAAQGFLTALGLAFCSVSSSILLGLVAAMCSLIPIVGTGLVWV 259 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + YL+I G++ L WGA + +D +RP ++ G ++ L F L+GGV+ Sbjct: 260 PAAGYLMITGHVGKGIFLLAWGAFVVSSIDNVIRPMVIQGRVQAHPLLILFALLGGVQAF 319 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+GLF GP+L+++I V+ + + I+E K Sbjct: 320 GLIGLFAGPILLSVITVLLQIMLEEIREKDAK 351 >gi|290508508|ref|ZP_06547879.1| hypothetical protein HMPREF0485_00279 [Klebsiella sp. 1_1_55] gi|289777902|gb|EFD85899.1| hypothetical protein HMPREF0485_00279 [Klebsiella sp. 1_1_55] Length = 369 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 33/363 (9%) Query: 15 MIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ ++ + L +++ +L A I+ P+ + ++ E + LA + T+ ++CL Sbjct: 13 LIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNG-LAALLTIVIICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKH--LS 128 + PL + E+ + SK+ N P V + +PG WA +H S Sbjct: 72 IVFTPLAIILSSLAYELNVVYSKLQ-HNDTQFPTVVASLFAHLPG--WARSFLAEHNLDS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQ 187 Q + LS+ LK+ ++ A G + +S M+ LFF +DG + + Sbjct: 129 AQQIQQQLSDVALKSG--QYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLT 186 Query: 188 LDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+SL +HLF + V R+T G +A+ +G + G A+W+AG+ Sbjct: 187 LESLPLSSYVKQHLFAKF--------AAVARATVKGTVAVALAQGALGGFAFWVAGLDGS 238 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A +++IP G+ I + +IYL G ++ + + I + +VD LRP L Sbjct: 239 ILWGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE---NKEKIS 357 VG K+P +GG+ G+ G IGP++ AL W ++++ +E N +++ Sbjct: 299 VGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACW--NLLSGREHAGNTDELD 356 Query: 358 SNF 360 F Sbjct: 357 EEF 359 >gi|70731365|ref|YP_261106.1| hypothetical protein PFL_4009 [Pseudomonas fluorescens Pf-5] gi|68345664|gb|AAY93270.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 353 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 10/217 (4%) Query: 132 SLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK L E +K+ G ++ A FG ++ +S M+ LFFF RDG + +++ Sbjct: 128 ELKGLQEKVVKSAMQGSQYLATQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGPELVRKIR 187 Query: 190 S---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L E+ +++ +V+R+T G ++A+ +G + G +W +PS + V Sbjct: 188 TAVPLAEY----QKRRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAV 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA I + V+ Y LI G I+ L L+G + +VD LRP LVG Sbjct: 244 LMAFLSLLPAVGAGIVWGPVAAYFLISGAIWQGVVLGLFGVFVIGLVDNLLRPILVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 K+P +GG+ GL G IGP++ AL W Sbjct: 304 KMPDYLILISTLGGLAIFGLNGFVIGPLIAALFMSSW 340 >gi|237749388|ref|ZP_04579868.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380750|gb|EEO30841.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 367 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 156/341 (45%), Gaps = 25/341 (7%) Query: 16 IMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + F+++V+L F L F+ + ++ P+ F+ K A++ + Sbjct: 12 LFFLLIVTLAFFSILLPFYGGIFWGFVLAILFMPLNDFFLRKMPAKKNLAALLTLAICLL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQH---GIPVPRWLSDIPGGMWASELWTKH-LS 128 + I+PL+ + + E L K++ NQ ++S +P WA ++ +S Sbjct: 72 IVIIPLIVVAGSLVEESSVLYQKIL--NQKIDSDASFHHFISQLPD--WAVDVLNHFGIS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASR---FGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ + + G SR G LD+ + M+ LFF RDG ++ Sbjct: 128 TFAELQKEATRLILVTG----QYLGSRVFIIGQNVLDFTVGFFVMLYLLFFLLRDGHDLA 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ S P + +R++ K VIR+T G ++A+ +G + G +W G+ + + Sbjct: 184 DKIRSK----IPLADNQKTRLLTKFMGVIRATVKGNLVVALVQGGLGGLIFWFLGIEAAL 239 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G I ++++++P G+ + + V+IY L+ G+I L +G + + ++D LRP LVG Sbjct: 240 LWGAIMSVLSLLPAGSGVVWAPVAIYFLLTGSILKGVILLAFGILVIGLIDNFLRPLLVG 299 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++P +GG+ GL G IGP++ AL W Sbjct: 300 KDTQMPDYLVLISTIGGMALFGLNGFIIGPMIAALFLTAWD 340 >gi|229589626|ref|YP_002871745.1| hypothetical protein PFLU2129 [Pseudomonas fluorescens SBW25] gi|229361492|emb|CAY48368.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 355 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 4/214 (1%) Query: 132 SLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +L+ L E +K+ G F A FG D+ +S M+ LFF RDG + +++ Sbjct: 128 NLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVR 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + P +++ +V+R+T G ++A+ +G + G +W +PS + V+ A Sbjct: 188 TAVPLAEPQK-RRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMA 246 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++P GA I + V+ Y L+ G+I+ L L+G + +VD LRP LVG K+P Sbjct: 247 FLSLLPAVGAGIVWGPVAAYFLLSGSIWQGVVLALFGVFVIGLVDNVLRPILVGKDTKMP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +GG+ GL G IGP++ AL W Sbjct: 307 DYLILISTLGGLSVFGLNGFVIGPLVAALFMSSW 340 >gi|77164019|ref|YP_342544.1| hypothetical protein Noc_0491 [Nitrosococcus oceani ATCC 19707] gi|254436267|ref|ZP_05049774.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76882333|gb|ABA57014.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207089378|gb|EDZ66650.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 359 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 163/337 (48%), Gaps = 37/337 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++++ Y + A + +AL+ +P+Y+ +I KK L+ + T+ + L I Sbjct: 26 VFLVMIHEYLIAILLAIIFTALL-----YPVYA-WILKKFNGRQVLSSMTTILLAILMIG 79 Query: 77 PLLFLFYYGMLEMKELVSKVV-------LANQHGIPV---PRWLSDIPGGMWASELWTKH 126 L + +S + + +Q+ P+ P+WL +A +L Sbjct: 80 LPLLGLLGAVAAEAIQISNSIAPWIEKKIPDQNASPLHEFPQWLP------FADQL---- 129 Query: 127 LSHPQSLKILSET-FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P +IL++ N FI S+ + + ++ M+ A+FFF+ G Sbjct: 130 --EPYRTRILAKVGEFAGNAGAFIASGISKATQGTIGFIVNFFIMLYAMFFFFIWG---P 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L +L +L P K S I+ K V ++T + II + +G+++G A+W+AG+ + Sbjct: 185 DSLINLIRYL-PLTEKDRSHILEKGLSVTKATLKSILIIGVLQGILVGLAFWVAGIKGAI 243 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G IT +++ +PG GAP+ + IYL+ I A + LWG I + +VD LRP +V Sbjct: 244 FWGTITVVLSAVPGLGAPVVWIPAVIYLIATDQIGWAIGMTLWGIIIVGLVDNILRPRIV 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 G K+P L +GG+ G++G+ +GP++ AL+ Sbjct: 304 GSEAKMPDLLILLATLGGILMFGMVGVIVGPIIAALL 340 >gi|239816920|ref|YP_002945830.1| hypothetical protein Vapar_3950 [Variovorax paradoxus S110] gi|239803497|gb|ACS20564.1| protein of unknown function UPF0118 [Variovorax paradoxus S110] Length = 360 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 100/361 (27%), Positives = 163/361 (45%), Gaps = 42/361 (11%) Query: 5 MLNPQ---GIMRWMIMFIILVSLYFLKGFFAPVL--SALIIGFTSWPIYSSFISKKEESS 59 M +PQ G+ ++ + + L+ L FF VL AL I FT P+Y + K Sbjct: 1 MNSPQLQRGVFLALLAAVTVAFLWVLMPFFGAVLWGVALAILFT--PLYKRLL-KAMPGK 57 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV--SKVVLANQHGIP---------VPR 108 A ++T+++ CLFIV +L L G+ ++E+V ++ + + Q VP+ Sbjct: 58 PNAAALSTLAI-CLFIV-ILPLAMVGVSLVQEIVQVTQSIRSGQINFAAYFQQILNAVPQ 115 Query: 109 WLSDI-----PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 WL ++ G M E W +S + G I A G D+ Sbjct: 116 WLLNLFDRFNLGDM---EAWQARISAGAA-----------QGSQLIAGQALTIGQNTFDF 161 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 +S M+ L+F RDG ++S+ + P +++ VIR+T G +AI Sbjct: 162 VISFFVMLYLLYFLVRDGSALSKSMREAVPLARPHTHYLLNKFT-TVIRATVKGNVAVAI 220 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLF 282 +G + G A+WL GV + V+ A ++++P GA + + V+IY L G+ + L Sbjct: 221 AQGAIGGLAFWLLGVQGALLWAVLMAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGILV 280 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +VD LRP LVG ++P +GG+ G+ G IGPV+ AL W Sbjct: 281 FVGVFVIGLVDNILRPVLVGKDTQMPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAW 340 Query: 343 K 343 Sbjct: 341 S 341 >gi|312960058|ref|ZP_07774571.1| hypothetical protein PFWH6_1962 [Pseudomonas fluorescens WH6] gi|311285715|gb|EFQ64283.1| hypothetical protein PFWH6_1962 [Pseudomonas fluorescens WH6] Length = 355 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 4/214 (1%) Query: 132 SLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +L+ L E +K+ G F A FG D+ +S M+ LFF RDG + +++ Sbjct: 128 NLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVR 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + P +++ +V+R+T G ++A+ +G + G +W +P+ + V+ A Sbjct: 188 TAVPLAEPQK-RRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPNALLWAVLMA 246 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++P GA I + V+ Y L+ G+I+ L L+G + +VD LRP LVG K+P Sbjct: 247 FLSLLPAVGAGIVWAPVAAYFLLSGSIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +GG+ GL G IGP++ AL W Sbjct: 307 DYLILISTLGGLSVFGLNGFVIGPLVAALFMSSW 340 >gi|288934305|ref|YP_003438364.1| hypothetical protein Kvar_1426 [Klebsiella variicola At-22] gi|288889034|gb|ADC57352.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] Length = 369 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 26/342 (7%) Query: 15 MIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ ++ + L +++ +L A I+ P+ + ++ E + LA + T+ ++CL Sbjct: 13 LIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNG-LAALLTIVIICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL--SH 129 + PL + E+ + SK+ + Q V + +PG WA +H S Sbjct: 72 IVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLFAHLPG--WARGFLAEHNLDSA 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQL 188 Q + LS+ LK+ ++ A G + +S M+ LFF +DG + + L Sbjct: 130 QQIQQQLSDVALKSG--QYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLTL 187 Query: 189 DSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +SL +HLF + V R+T G +A+ +G + G A+W+AG+ + Sbjct: 188 ESLPLSSYVKQHLFAKF--------AAVARATVKGTVAVALAQGALGGFAFWVAGLDGSI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A +++IP G+ I + +IYL G ++ + + I + +VD LRP LV Sbjct: 240 LWGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G K+P +GG+ G+ G IGP++ AL W Sbjct: 300 GKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|300115131|ref|YP_003761706.1| hypothetical protein Nwat_2608 [Nitrosococcus watsonii C-113] gi|299541068|gb|ADJ29385.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 360 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 166/357 (46%), Gaps = 39/357 (10%) Query: 4 TMLNPQGIMRWMIMFIIL-------VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 T L+ + R+ +FI+L V L + + VL A+I +P+Y+ +I KK Sbjct: 2 TQLDDEAQNRYRKIFIMLLLISILAVFLVMIHEYIIAVLLAIIFTAMLYPVYA-WILKKF 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-------LANQHGIPV--- 106 L+ + T+ + L I L + VS + + +Q+ + Sbjct: 61 HGKQVLSSMTTLLLAILMIGLPLLGLLGAVAAEAIQVSDTIGPWIEKKIPDQNVSSLHEF 120 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSET-FLKTNGIDFIPRFASRFGMIFLDYCL 165 P+WL +A +L P +IL++ N FI S+ + + + Sbjct: 121 PQWLP------FADQL------EPYRTRILAKVGEFAGNAGAFIASGISKATQGTIGFIV 168 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIA 222 M+ A+FFF+ G L +L +L P K S I+ K V ++T G+ II Sbjct: 169 KFFIMLYAMFFFFIWG---PDSLINLIRYL-PLTEKDRSHILEKGLSVTKATLKGILIIG 224 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 + +G ++G A+W+AG+ + G IT +++ IPG GAP+ + IYLL I A + Sbjct: 225 VLQGTLVGLAFWIAGIKGAIFWGTITVVLSAIPGLGAPVVWIPAVIYLLATNQIGWAIGM 284 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 LWG I + VD LRP +VG K+P L +GG+ G++G+ +GP++ AL+ Sbjct: 285 TLWGIIIVGSVDNILRPRIVGSETKMPDLLILLATLGGILMFGMVGVIVGPIIAALL 341 >gi|302038875|ref|YP_003799197.1| hypothetical protein NIDE3589 [Candidatus Nitrospira defluvii] gi|300606939|emb|CBK43272.1| conserved membrane protein of unknown function DUF20 [Candidatus Nitrospira defluvii] Length = 360 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 125/241 (51%), Gaps = 19/241 (7%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 +P LS +PGG E W + + +S E F+ ++ F SRF + L + Sbjct: 107 LPDRLSGLPGGHLVRE-WLERFTGRESDL---EQFVLSSAKTF-----SRFIVGELSDLV 157 Query: 166 SIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 +FM++A LFFF++DG L +L L ++ KI + + IR+ G Sbjct: 158 RDVFMLVADFLVMMFTLFFFFKDGRHWLASLYAL-IPLEASHKDKILARLDQTIRAVVKG 216 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIF 276 + + AI +GL+ G AY + GVP + L +T ++A +P GG + + V++YLL G + Sbjct: 217 IVLTAIAQGLLAGVAYAVLGVPFPMVLMALTILLAPLPFGGTALIWGPVALYLLWAGAVG 276 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + WG + +D+ L+P +G ++P L F ++GG+ G+LGLF+GP+L+ Sbjct: 277 KGLVMLAWGIGVVSTIDQILKPLFIGQGAEIPVLLLTFSVLGGLAVYGILGLFLGPILVG 336 Query: 337 L 337 L Sbjct: 337 L 337 >gi|294010794|ref|YP_003544254.1| putative permease [Sphingobium japonicum UT26S] gi|292674124|dbj|BAI95642.1| putative permease [Sphingobium japonicum UT26S] Length = 369 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 83/339 (24%), Positives = 151/339 (44%), Gaps = 24/339 (7%) Query: 18 FIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 F+++VS+ F ++ FFA +L +I P+ + A + + ++ L Sbjct: 19 FVLIVSVAFALVIEPFFAAILWGVIAAILFAPVNQGLVGMMPRHRNSAAALTLLLIVALV 78 Query: 75 IVPLLFL---------FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 IVP + L +Y ++ E+ + A Q +PRW + + L Sbjct: 79 IVPAIILAMALVQEATLFYAKVQTGEINFARMFA-QFQASLPRWAAA-----FLERLGIT 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + ++LSE T+ + A + G + +++ M+ FF RDG ++ Sbjct: 133 NFAAVR--EMLSEGI--TSSFRTVATQALQIGQSAFSFLMALGVMLYLTFFLLRDGPKLA 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +D + AY + + + VIR+T G ++AI +G++ G +W G+P + G Sbjct: 189 AMVDR-AAPMRTAYRQALMQQFVIVIRATIKGSIVVAIVQGVIGGVVFWALGLPGALLWG 247 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ ++IP G + + V+IYL + G + L G + +VD LRP LVG Sbjct: 248 VLMGAFSLIPAVGTGLVWVPVAIYLFVTGAVVEGLILAFCGMFVIGMVDNILRPILVGRD 307 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++P +GG+ G G+ IGPV+ AL W Sbjct: 308 TRIPDYVVLITTLGGIDLFGFNGIVIGPVIAALFIATWN 346 >gi|192288979|ref|YP_001989584.1| hypothetical protein Rpal_0549 [Rhodopseudomonas palustris TIE-1] gi|192282728|gb|ACE99108.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 384 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 17/252 (6%) Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P WL D+ S +L+ Q + LS L+ G ++ A G D+ ++ Sbjct: 112 PDWLGDL-----LSRFGVGNLADIQ--QRLSAALLR--GSQYLAGQALDIGQSTFDFTVN 162 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAI 223 + M+ LFF RDG ++ ++ P +R++ K VIR+T G +IA+ Sbjct: 163 LFVMVYLLFFLLRDGDLLAARI----RRATPLGVDHQTRLLDKFTVVIRATVKGNMLIAL 218 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLF 282 +G + G A+++ G+ + V+ A ++++P GA I + +++YL+ G++++ L Sbjct: 219 IQGALGGLAFYVLGISGALMWAVVMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLI 278 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +WG + + +VD LRP LVG ++P +GG+ GL G IGPV+ A+ W Sbjct: 279 VWGMLVIGMVDNFLRPILVGKDTRMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATW 338 Query: 343 KESIMAIKENKE 354 +A ++ + Sbjct: 339 DIYSIAREDAGD 350 >gi|39933625|ref|NP_945901.1| hypothetical protein RPA0548 [Rhodopseudomonas palustris CGA009] gi|39647471|emb|CAE25992.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris CGA009] Length = 386 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 17/252 (6%) Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P WL D+ S +L+ Q + LS L+ G ++ A G D+ ++ Sbjct: 112 PDWLGDL-----LSRFGVGNLADIQ--QRLSAALLR--GSQYLAGQALDIGQSTFDFTVN 162 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAI 223 + M+ LFF RDG ++ ++ P +R++ K VIR+T G +IA+ Sbjct: 163 LFVMVYLLFFLLRDGDLLAARI----RRATPLGVDHQTRLLDKFTVVIRATVKGNMLIAL 218 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLF 282 +G + G A+++ G+ + V+ A ++++P GA I + +++YL+ G++++ L Sbjct: 219 IQGALGGLAFYVLGISGALMWAVVMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLI 278 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +WG + + +VD LRP LVG ++P +GG+ GL G IGPV+ A+ W Sbjct: 279 VWGMLVIGMVDNFLRPILVGKDTRMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATW 338 Query: 343 KESIMAIKENKE 354 +A ++ + Sbjct: 339 DIYSIAREDAGD 350 >gi|94309527|ref|YP_582737.1| hypothetical protein Rmet_0582 [Cupriavidus metallidurans CH34] gi|93353379|gb|ABF07468.1| conserved hypothetical protein; putative membrane protein [Cupriavidus metallidurans CH34] Length = 367 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 40/352 (11%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL L F +L I+ ++SW Y+ A+I + + + P ++ Sbjct: 23 SLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRGLAALICVLIATVIVLGPFVYAG 82 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + EL + V +HGIP +P WLS +P G W K ++ SET Sbjct: 83 ASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQIESAWNKVITAD------SET- 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDG--------FSIS 185 + + + + G L LSI I+ FFFY G + Sbjct: 136 -----VASLRKLIAPVGHALLGAGLSIGAGLGQLALSIVLAFFFYTGGELAVDWVRGGMR 190 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +HL + +V V+ + F+ + IG +W+AGVP LG Sbjct: 191 RVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIG--------FWIAGVPGAAILG 242 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT ++++P G P+++ +++L G A + +WGA + + D ++P L+ Sbjct: 243 FITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKPLLISKGT 302 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 LP + G++GG G LG+FIGP ++A+ + ++ + N+E+ S Sbjct: 303 GLPLIWIMMGVLGGALAFGFLGVFIGPTVLAVAYALLRDWTIG---NQERAS 351 >gi|160898931|ref|YP_001564513.1| hypothetical protein Daci_3492 [Delftia acidovorans SPH-1] gi|160364515|gb|ABX36128.1| protein of unknown function UPF0118 [Delftia acidovorans SPH-1] Length = 387 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 142/315 (45%), Gaps = 10/315 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGI 104 P++ +++ + A+ + + + I+PL + + E + +V N G Sbjct: 45 PLHRRLLARMPRRTNLAALSTLLLCLVVAILPLALIGASLVREASLIYERVNSGNLDAGT 104 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLD 162 + + + +P W + W + L H SL L + + A G Sbjct: 105 YLQQIMDALPS--WVTP-WLERL-HLGSLAELQDKLSSIAMQASKLAATKALGIGQNTFG 160 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + + M+ LFF RDG ++Q++ + L + ++S VIR+T G +A Sbjct: 161 FLVGFCVMLYLLFFLLRDGRDLTQRI-RMAIPLQADHKAELSSKFTTVIRATVKGNLAVA 219 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 +G + G +W+ G+ V GV+ A ++++P GA + + V+IY L G + L Sbjct: 220 AAQGALGGLIFWILGIQGPVLWGVVMAFLSLLPAVGAGLIWAPVAIYFLATGAMGKGLIL 279 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +G + + +VD LRP LVG K+P +GG+ GL G IGPV+ AL I Sbjct: 280 IAYGVLVIGLVDNVLRPLLVGKDTKMPDYIVLISTLGGMALFGLTGFVIGPVIAALFMAI 339 Query: 342 WKE-SIMAIKENKEK 355 W S M +++ +++ Sbjct: 340 WDMFSRMQVQDEEKR 354 >gi|152971165|ref|YP_001336274.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895753|ref|YP_002920489.1| putative transport protein [Klebsiella pneumoniae NTUH-K2044] gi|150956014|gb|ABR78044.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548071|dbj|BAH64422.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 369 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 159/343 (46%), Gaps = 28/343 (8%) Query: 15 MIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ ++ + L +++ +L A I+ P+ + ++ E + LA + T+ ++CL Sbjct: 13 LIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNG-LAALMTIVIICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL--S 128 + PL + E+ + SK+ N P V + +PG WA H S Sbjct: 72 IVFTPLAIILSSLAYELNLVYSKLQ-HNDTQFPTVVASLFAHLPG--WARSFLADHNLDS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQ 187 Q + LS+ LK G ++ A G + +S M+ LFF +DG + + Sbjct: 129 AQQIQQQLSDAALK--GGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLI 186 Query: 188 LDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+SL +HLF + V R+T G +A+ +G + G A+W+AG+ Sbjct: 187 LESLPLSSYVKQHLFAKF--------AAVARATVKGTVAVALAQGALGGFAFWIAGLDGS 238 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A +++IP G+ I + +IYL G ++ + + I + +VD LRP L Sbjct: 239 ILWGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VG ++P +GG+ G+ G IGP++ AL W Sbjct: 299 VGKDTRMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|56461267|ref|YP_156548.1| PerM family permease [Idiomarina loihiensis L2TR] gi|56180277|gb|AAV82999.1| Predicted permease PerM family [Idiomarina loihiensis L2TR] Length = 348 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 +G F+ A G + +S+ MI FF RDG + L LG+ + Sbjct: 139 SGSKFLAEEALSIGQNTFSFIISLSLMIYLTFFLLRDGHLLIDLLVKALPLGDERERKLF 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K + +V R+T G ++AI +G + G + L G+P + GV+ A +++IP GA Sbjct: 199 TKFA----EVTRATVKGNIVVAIVQGTLGGIIFALLGIPGALLWGVVMAFLSLIPAVGAS 254 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + VSIYL GN T L +GAI + + D LRP LVG KLP F +GG Sbjct: 255 LVWLPVSIYLYATGNWIAGTILVAYGAIVIGLADNVLRPVLVGRDTKLPDYLVLFSTLGG 314 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 + G+ G +GP++ AL V W Sbjct: 315 LSLFGITGFVLGPLVAALFLVFWD 338 >gi|319763353|ref|YP_004127290.1| hypothetical protein Alide_2671 [Alicycliphilus denitrificans BC] gi|330825587|ref|YP_004388890.1| hypothetical protein Alide2_3027 [Alicycliphilus denitrificans K601] gi|317117914|gb|ADV00403.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans BC] gi|329310959|gb|AEB85374.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans K601] Length = 352 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 6/245 (2%) Query: 101 QHGIPVPRWLSDIPGGMWASELWTK-HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 +G + + L+ +P W EL + HL+ L+ T + F+ A G Sbjct: 101 NYGAYLQQVLAALPA--WVLELLDRFHLTSMAELQA-RLTAVGAQASQFLATKALDVGQN 157 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 L + +S M+ LFF RDG ++ ++ L + +++R VIR+T G Sbjct: 158 TLQFIVSFGVMLYLLFFLLRDGPRLAARIRQ-AIPLDTEHKNQLARKFTTVIRATVKGNI 216 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 ++A +G + G +W+ G+ V GV+ A ++++P GA + + V+IY L G+ A Sbjct: 217 VVAAAQGALGGLIFWILGIQGPVMWGVLMAFLSLLPAVGASLIWGPVAIYFLATGSTGQA 276 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L +G + +VD LRP LVG K+P +GG+ GL G IGPV+ AL Sbjct: 277 AILTAYGVGVIGLVDNLLRPLLVGKDTKMPDYVVLISTLGGMALFGLTGFVIGPVIAALF 336 Query: 339 AVIWK 343 W Sbjct: 337 MATWD 341 >gi|316932016|ref|YP_004106998.1| hypothetical protein Rpdx1_0627 [Rhodopseudomonas palustris DX-1] gi|315599730|gb|ADU42265.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris DX-1] Length = 381 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 121/241 (50%), Gaps = 17/241 (7%) Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P W+ D+ G +L+ Q + LS L+ G ++ A G D+ ++ Sbjct: 112 PDWIGDLLG-----RFGVGNLADLQ--QRLSAVLLR--GSQYLAGQALGIGQSTFDFTVN 162 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAI 223 + M+ LFF RDG ++ ++ P +R++ K VIR+T G +IA+ Sbjct: 163 LFVMVYLLFFLLRDGDLVAGRI----RRATPLGVDHQTRLLDKFTVVIRATVKGNMLIAL 218 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLF 282 +G + G A+++ G+ + V+ A ++++P GA + + +++YL+ G+I++ L Sbjct: 219 IQGSLGGLAFYVLGISGALMWAVVMAFLSLLPAVGAGLVWLPMALYLIFTGSIWHGIGLI 278 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +WGA+ + +VD LRP LVG ++P +GG+ GL G +GPV+ A+ W Sbjct: 279 VWGALVIGMVDNVLRPILVGKDTRMPDYVVLISTLGGLEVFGLNGFVVGPVIAAMFIAAW 338 Query: 343 K 343 Sbjct: 339 D 339 >gi|330994579|ref|ZP_08318502.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758220|gb|EGG74741.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 390 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 26/342 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +L A I+ F++WP++ ++ S A++ T+ + +VPL+ + + ++ Sbjct: 57 FMTALLWAAILTFSTWPVFMRL--RRGMSLLPAAMVMTLLCALVLVVPLVIVVSNSIADV 114 Query: 90 KELVSKVVLA--NQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +V A H P+P ++ IP G ++ W K SE I Sbjct: 115 PATLQYIVDAVGTLHLPPLPARVAHIPHFGPEIADKWQK----------WSE---DVGSI 161 Query: 147 DFIPR-FASRFGMIFLDYCLSI----IFMIIAL---FFFYRDGFSISQQLDSLGEHLFPA 198 D + R +A R G L + + + +AL FFF+ G + ++ + Sbjct: 162 DQVVRPYAGRIGQSVLSAMMQLASGMAHLAMALFISFFFWLGGDGLGTTFVAVVRRIAGV 221 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 Y +I IV + IR T G+ AI +G++ G + +AG+ S V LG ITA +A++P GA Sbjct: 222 YADRILGIVGRTIRGTVYGILGTAIIQGILTGIGFAIAGISSPVLLGAITAFVAVLPIGA 281 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ + +++LL+ + L L+G I + D +RP + +LP+L T G++G Sbjct: 282 PLIWIPAAVFLLLTHHPGWGIFLLLYGTIIVSGADHIIRPMFIARGAQLPYLLTVLGVLG 341 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 GV T G LG+F+GPVL+ + + E + I + Sbjct: 342 GVLTFGGLGIFLGPVLIGVGYTLTAEFAAGDPRSNNPIPDDL 383 >gi|33597100|ref|NP_884743.1| hypothetical protein BPP2512 [Bordetella parapertussis 12822] gi|33566551|emb|CAE37807.1| putative exported protein [Bordetella parapertussis] Length = 358 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 8/201 (3%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKI 203 FI A G + + M+ LFF RDG +S++L L EH + + + Sbjct: 146 QFIATQAFNIGQDTFQFLIGFGVMLYLLFFLLRDGSQLSRRLRRAVPLDEH----HKQHL 201 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R VIR+T G ++A +G + G + + G+ + GVI A ++++P GA + + Sbjct: 202 FRKFTTVIRATVKGNIVVAAAQGALGGVMFSVLGIQGALLWGVIMAFLSLLPAIGAGLIW 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V++Y L+ G I+ L L+G + + +VD LRP LVG KLP +GG+ Sbjct: 262 APVAVYFLLTGAIWQGVVLILFGVLVIGMVDNVLRPLLVGKDTKLPDYVVLISTLGGMAL 321 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 GL G IGP++ AL W Sbjct: 322 FGLNGFVIGPLIAALFVACWD 342 >gi|206578196|ref|YP_002237378.1| hypothetical protein KPK_1525 [Klebsiella pneumoniae 342] gi|206567254|gb|ACI09030.1| putative membrane protein [Klebsiella pneumoniae 342] Length = 369 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 26/342 (7%) Query: 15 MIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ ++ + L +++ +L A I+ P+ + ++ E + LA + T+ ++CL Sbjct: 13 LIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNG-LAALLTIVIICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL--SH 129 + PL + E+ + SK+ + Q V ++ +P WA +H S Sbjct: 72 IVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLIAHLPD--WARGFLAEHNLDSA 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQL 188 Q + LS+ LK+ ++ A G + +S M+ LFF +DG + + L Sbjct: 130 QQIQQQLSDVALKSG--QYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLTL 187 Query: 189 DSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +SL +HLF + V R+T G +A+ +G + G A+W+AG+ + Sbjct: 188 ESLPLSSYVKQHLFAKF--------AAVARATVKGTVAVALAQGALGGFAFWVAGLDGSI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A +++IP G+ I + +IYL G ++ + + I + +VD LRP LV Sbjct: 240 LWGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G K+P +GG+ G+ G IGP++ AL W Sbjct: 300 GKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|26988931|ref|NP_744356.1| hypothetical protein PP_2207 [Pseudomonas putida KT2440] gi|24983744|gb|AAN67820.1|AE016413_2 membrane protein, putative [Pseudomonas putida KT2440] Length = 354 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD---SLGEHLFPAY 199 T G + A FG ++ +S M+ LFFF RDG +++++ L EH Sbjct: 141 TQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARRVRMAVPLPEH----Q 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 +++ +V+R+T G ++AI +G + G +W+ +PS + V+ A ++++P GA Sbjct: 197 KRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVLMAFLSLLPAVGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + V+ Y L+ G I L +G + + +VD LRP LVG ++P +G Sbjct: 257 GIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPILVGKDTRMPDYLILVSTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+ GL G IGP++ AL W Sbjct: 317 GLAVFGLNGFVIGPLIAALFVSSW 340 >gi|325983330|ref|YP_004295732.1| hypothetical protein NAL212_2783 [Nitrosomonas sp. AL212] gi|325532849|gb|ADZ27570.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 362 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 19/335 (5%) Query: 13 RWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 R +++ I+L+ Y L F ++ A+++ ++WPIY ++T +++ V ++ Sbjct: 12 RLVVIAILLIGCYQILHPFIPAIVFAMVVCISTWPIYLQLRRALGGNTTLASLLMIVGMI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 L I+P L + + ++ V V Q I P WL D P G W +S Sbjct: 72 LLVIIPSALLAFSLADNVTAIIDAVKVFMQQGSIEPPSWLKDTPFFGEQFIRYWQGLMSG 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +L L+ I F G + L ++F FFFYRDG ++ Q L Sbjct: 132 GKEVGMLLTGLLEP-----IKNFLLNLGNVIGKSLLQMVFAAFIGFFFYRDGETLIQMLH 186 Query: 190 S-----LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA- 243 + L L +I V V+ F A+ + + + +AGV A Sbjct: 187 NGVAKLLDGSLGTDPLVQIHNTVTGVVYGIFGS----ALAQAIAAMIGFLIAGVSGSGAF 242 Query: 244 -LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG T +++IP G + + VS++ L +G+ A LWG + +D +RP+L+ Sbjct: 243 LLGSATFFLSVIPMGPSLVWGGVSVWFLYEGSYGWAIFTILWGIFVISSIDNFVRPYLIS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L FL G GG+ G +G+FIGP ++A+ Sbjct: 303 RGSNLSFLLVVLGASGGIIAYGFIGIFIGPPILAI 337 >gi|104782535|ref|YP_609033.1| hypothetical protein PSEEN3498 [Pseudomonas entomophila L48] gi|95111522|emb|CAK16242.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 354 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 2/201 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T G F+ A FG ++ +S M+ LFFF R+G +++++ L ++ Sbjct: 141 TEGSQFLAGQAFSFGQGTFEFLVSFGIMLYLLFFFLREGAEVARKVRQ-AVPLPEQQKRR 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + +V+R+T G ++AI +G + G +W+ +PS + V+ A ++++P GA I Sbjct: 200 LQLKFKRVVRATVKGNLLVAITQGALGGLIFWVLDIPSALVWAVLMAFLSLLPAVGAGIV 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V++Y L+ G + L +G + + +VD LRP LVG ++P +GG+ Sbjct: 260 WGPVAVYFLLTGATWQGVVLIAFGVLVIGLVDNLLRPILVGKDTRMPDYLVLVSTLGGLA 319 Query: 322 TMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 320 VFGLNGFVIGPLIAALFVSSW 340 >gi|146310488|ref|YP_001175562.1| hypothetical protein Ent638_0826 [Enterobacter sp. 638] gi|145317364|gb|ABP59511.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 369 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 96/363 (26%), Positives = 171/363 (47%), Gaps = 33/363 (9%) Query: 16 IMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I+ + +VSL F L +F+ VL A I+ P+ + S E + LA + T+ ++C Sbjct: 12 ILILAIVSLAFFDILAPYFSAVLWASILAVIFHPVKNKLRSMMGERNG-LASLLTLVIIC 70 Query: 73 LFI-VPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKH--LS 128 L + PL+ + +E+ + +K+ N Q V + +P WA H + Sbjct: 71 LIVFTPLIVILSSLAIELNVVYTKLQHTNSQFPEVVASLFAHLP--EWARNFLVDHNLDN 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQ 187 Q + LS+ LK G ++ A G + +S MI LFF +DG + + Q Sbjct: 129 AAQIQQKLSDAALK--GGQYLAGSAFLIGKGTFGFAISFGIMIYLLFFLLKDGPYLVRQI 186 Query: 188 LDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 LDSL +HLF + V R+T G ++A+ +G++ G A+++AG+ Sbjct: 187 LDSLPLSDFVKQHLFAKF--------AAVSRATVKGTVVVALVQGILGGIAFYIAGIDGS 238 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A +++IP G+ I + +++L ++ + + I + +VD LRP L Sbjct: 239 ILWGALMAFLSLIPAVGSAIIWVPAAVFLFATQQLWQGFFIVGFFVIIVGLVDNILRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE---NKEKIS 357 VG K+P +GG+ G+ G IGP++ AL W +I++ ++ N ++I Sbjct: 299 VGKDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFIACW--NILSGRDHAGNSDEID 356 Query: 358 SNF 360 F Sbjct: 357 EAF 359 >gi|261319296|ref|ZP_05958493.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261298519|gb|EEY02016.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] Length = 354 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 28 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 88 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 142 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 198 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G+ G +WL G+ + + GVI +M+P GA + Sbjct: 199 FLEKFTAVIRATVKGNIIIAIIQGMNGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 258 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 259 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 318 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 319 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 349 >gi|149377701|ref|ZP_01895436.1| hypothetical protein MDG893_12430 [Marinobacter algicola DG893] gi|149357986|gb|EDM46473.1| hypothetical protein MDG893_12430 [Marinobacter algicola DG893] Length = 371 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/355 (24%), Positives = 155/355 (43%), Gaps = 16/355 (4%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R + ++ VSL F +K FF P+ A+ I P+ + + +A++ + Sbjct: 8 RTFLAMLVGVSLAFILLMKPFFGPIFWAVAIALIFHPVREYLARRLGDRPNTIALLTLLI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLS 128 M + ++P+L L + E L ++ + G + R + P S L Sbjct: 68 CMVIVVIPVLGLVTSLVAEGLSLYQRIQEGQLRPGDYIDRVIQSFPA--IESFFAQFGLD 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + F+ G F+ + A FG + L + MI FF RDG + L Sbjct: 126 FAEVRDRVVSGFV--GGSQFLAKQALGFGQNTFQFFLGLALMIYLAFFLLRDGSKLVDLL 183 Query: 189 DS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 LG+ + K + +V R+T G +IA+ +G + G +W+ G+ + G Sbjct: 184 IRALPLGDERERLLFAKFA----EVTRATVKGNLLIAVIQGALGGGIFWILGIQGALLWG 239 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ AI++++P GA + + ++YL G + +A L +G I + + D LRP VG Sbjct: 240 VVMAIVSLLPAVGAALVWVPAALYLAATGEMVSAIVLTAFGVIVIGLADNLLRPVFVGRD 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 KLP +GG+ G+ G +GP++ AL W I E+++ S N Sbjct: 300 TKLPDYIVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFGESEQAPSVN 354 >gi|254711673|ref|ZP_05173484.1| hypothetical protein BpinB_15754 [Brucella pinnipedialis B2/94] Length = 352 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 86 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 140 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G+ G +WL G+ + + GVI +M+P GA + Sbjct: 197 FLEKFTAVIRATVKGNIIIAIIQGMNGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 257 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 317 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|85711221|ref|ZP_01042281.1| Predicted permease PerM family protein [Idiomarina baltica OS145] gi|85695134|gb|EAQ33072.1| Predicted permease PerM family protein [Idiomarina baltica OS145] Length = 348 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + +++ M+ FF RDG + + + LG+ +KK + +V R+T G Sbjct: 158 FVMNLGLMLYLTFFLLRDGNKLIRLMVRALPLGDEREHQLFKKFA----EVTRATVKGNI 213 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 ++A+ +G + G + L G+P+ V GV+ A +++IP GA I + VS+YLL G F Sbjct: 214 VVAMVQGALGGVIFALLGIPAPVLWGVVMAFLSLIPAVGAGIVWLPVSVYLLATGATFEG 273 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L+G I + + D LRP LVG KLP F +GG+ G+ G IGP++ AL Sbjct: 274 IVLVLYGLIIIGLADNALRPLLVGRDTKLPDYVVLFSTLGGLSLFGITGFVIGPLIAALF 333 Query: 339 AVIWK 343 W Sbjct: 334 LAFWD 338 >gi|296445779|ref|ZP_06887732.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296256759|gb|EFH03833.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 349 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 155/320 (48%), Gaps = 12/320 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P+ A I+ + ++P+Y + + A AT+ ++ + +VP+ FL ++ Sbjct: 26 FLTPLAWAAILAYATYPVYRRILRASGNRPSLAATFATLLLVVVLVVPVAFLLVRLQSDL 85 Query: 90 KELVSKVVLANQ---HGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNG 145 E + L++Q I +P ++ P G ++ + P+ + + +++ Sbjct: 86 AEAYRE--LSSQFADEPIVLPDAVARFPVVGPALDDMLNTIWNDPERRREQVKEWIEP-- 141 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ A GMI I IALFFFYRDG + ++L + + A R Sbjct: 142 --WMSGLARTLGMIGRSLA-QIALTAIALFFFYRDGALVVEELRAGLRKVVGASADNYVR 198 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + ++ G+ + A+ +GL+ G Y + GV + + LG +TA+ A++P G + Sbjct: 199 AIGATTQAVVSGVIVSALFQGLIAGVGYAVVGVGTPILLGALTAVAALVPFIGTWAVWAP 258 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V +YLL+ G L WG + + VD ++P L+ +P + FG++GG+ G Sbjct: 259 VGVYLLVVGQTGAGVALLAWGGLVVSWVDNIIKPLLISSAADIPLVIVLFGVLGGLLAFG 318 Query: 325 LLGLFIGPVLMALIAVIWKE 344 +GLF+GP+++A++ IW+E Sbjct: 319 FVGLFLGPLILAVLLSIWRE 338 >gi|325274729|ref|ZP_08140770.1| hypothetical protein G1E_15893 [Pseudomonas sp. TJI-51] gi|324100130|gb|EGB97935.1| hypothetical protein G1E_15893 [Pseudomonas sp. TJI-51] Length = 354 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD---SLGEHLFPAY 199 T G + A FG ++ + M+ LFFF R+G +++++ L EH Sbjct: 141 TQGSQVLASQAFSFGQGTFEFLIGFGIMMYLLFFFLREGADVARRVRLAVPLPEHQKRRL 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 K +R+V R+T G ++A+ +G + G +W+ +PS + GV+ A+++++P GA Sbjct: 201 QLKFNRVV----RATVKGNVLVAVTQGALGGFIFWVLDIPSALVWGVLMALLSLLPAVGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + V++Y L+ G I L +G + + +VD LRP LVG ++P +G Sbjct: 257 GIVWAPVAVYFLLTGAILPGIILTAFGVLVIGLVDNLLRPILVGKDTRMPDYLILVSTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+ GL G IGP++ AL W Sbjct: 317 GLTVFGLNGFVIGPLIAALFMSSW 340 >gi|146282661|ref|YP_001172814.1| hypothetical protein PST_2313 [Pseudomonas stutzeri A1501] gi|145570866|gb|ABP79972.1| membrane protein, putative [Pseudomonas stutzeri A1501] Length = 337 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 2/200 (1%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G F+ A FG + +S M+ LFFF RDG + ++ L A +++ Sbjct: 126 EGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVARIRK-AIPLSDAQKRRL 184 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 +V+R+T G ++A+ +G + G + + G+ + GV+ A ++++P GA + + Sbjct: 185 FNKFTRVVRATVKGNIVVAVTQGALGGIIFAVLGISGALLWGVLMAFLSLLPAVGAGLIW 244 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG+ Sbjct: 245 TPVAIYFLMTGAIWQGVILTLYGVLVIGLVDNILRPILVGKDTKMPDYVVLISTLGGLAL 304 Query: 323 MGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 305 FGLNGFVIGPLVAALFISTW 324 >gi|148555776|ref|YP_001263358.1| hypothetical protein Swit_2868 [Sphingomonas wittichii RW1] gi|148500966|gb|ABQ69220.1| protein of unknown function UPF0118 [Sphingomonas wittichii RW1] Length = 358 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 13/320 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF +L L++ P++ + + S A+I + ++ + I+P FL G + Sbjct: 35 FFGAILWGLVLALMFSPVHRRILDRMPGRSNVAALITLLIIILIVILPAAFL---GSAMI 91 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGM--WASE-LWTKHLSH-PQSLKILSETFLKTNG 145 +E + + I + R + G + WAS L + L+ + + +SET + Sbjct: 92 QEFLHVYAMVQSGQIDIARMFEQMTGALPDWASHWLAARGLTDFAAARQQISETL--SGS 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGEHLFPAYWKKIS 204 I A + G L+ L + M+ FF RDG ++++ ++S+ L P + + Sbjct: 150 FSAIAAHALQVGQGALNLVLMLGVMLYLTFFLIRDGEELARRVIESI--PLDPDRRRAVI 207 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 R V R+T G I+AI +G G + L G+ + G + AI ++IP G I + Sbjct: 208 RNFTVVTRATIKGSLIVAIVQGFTGGVTFALLGIEGALLWGTMMAIFSLIPAIGCGIVWV 267 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V++YL G + L + GA+ + +D LRP LVG ++P +GG++ Sbjct: 268 PVALYLFATGAVVKGIILVVAGALVIGSIDNVLRPLLVGRDTRMPDYVVLISTLGGLQLF 327 Query: 324 GLLGLFIGPVLMALIAVIWK 343 G G +GPV+ AL W Sbjct: 328 GFHGFIVGPVVAALFIGTWN 347 >gi|313499673|gb|ADR61039.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 354 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD---SLGEHLFPAY 199 T G + A FG ++ +S M+ LFFF RDG +++++ L EH Sbjct: 141 TQGSQALASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARRVRMAVPLPEH----Q 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 +++ +V+R+T G ++AI +G + G +W +PS + V+ A ++++P GA Sbjct: 197 KRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWALDIPSALVWAVLMAFLSLLPAVGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + V+ Y L+ G I L +G + + +VD LRP LVG ++P +G Sbjct: 257 GIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPILVGKDTRMPDYLILVSTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+ GL G IGP++ AL W Sbjct: 317 GLAVFGLNGFVIGPLIAALFVSSW 340 >gi|148548739|ref|YP_001268841.1| hypothetical protein Pput_3531 [Pseudomonas putida F1] gi|148512797|gb|ABQ79657.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 354 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD---SLGEHLFPAY 199 T G + A FG ++ +S M+ LFFF RDG +++++ L EH Sbjct: 141 TQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARRVRMAVPLPEH----Q 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 +++ +V+R+T G ++AI +G + G +W+ +PS + V+ A ++++P GA Sbjct: 197 KRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVLMAFLSLLPAVGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + V+ Y L+ G I L +G + + +VD LRP LVG ++P +G Sbjct: 257 GIIWAPVAAYFLLTGAILPGVVLTAFGVLVIGLVDNVLRPILVGKDTRMPDYLILVSTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+ GL G IGP++ AL W Sbjct: 317 GLAVFGLNGFVIGPLIAALFVSSW 340 >gi|319795203|ref|YP_004156843.1| hypothetical protein Varpa_4567 [Variovorax paradoxus EPS] gi|315597666|gb|ADU38732.1| protein of unknown function UPF0118 [Variovorax paradoxus EPS] Length = 377 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 98/362 (27%), Positives = 163/362 (45%), Gaps = 44/362 (12%) Query: 5 MLNPQ---GIMRWMIMFIILVSLYFLKGFFAPVL--SALIIGFTSWPIYSSFISKKEESS 59 M +PQ G+ ++ + + ++ L FF VL AL I FT P+Y ++ KK Sbjct: 1 MNSPQLQRGVFIALLAAVTVAFVWVLLPFFGAVLWGVALAILFT--PLYK-WLLKKMRGK 57 Query: 60 TFLAVIATVSVMCLFIVPL-LFLFYYGMLEMKELVSKVVLANQHGIPV---------PRW 109 A +AT+++ CLFIV L L + +++ LV++ + + Q P+W Sbjct: 58 PNAAALATLAI-CLFIVILPLAMVGVSLVQEIALVTQNIRSGQINFAAYFQQILDASPQW 116 Query: 110 LSDIP-----GGMWASELWTKHLSHP--QSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 L + G M A W +S Q+ +I++ L G D Sbjct: 117 LLSLVERFNLGDMAA---WQARISTAAGQASQIIASQALA-------------IGQNTFD 160 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +S M+ L+F RDG ++S+ + P +++ VIR+T G +A Sbjct: 161 FIVSFFVMLYLLYFLVRDGSTLSKTMRDAVPLAKPHTHYLLNKFT-TVIRATVKGNVAVA 219 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 I +G + G A+W GV + V+ A ++++P GA + + V+IY L G+ + L Sbjct: 220 IAQGTIGGLAFWFLGVQGALLWAVLMAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGVL 279 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + +VD LRP LVG ++P +GG+ G+ G IGPV+ AL Sbjct: 280 IFVGVFVIGLVDNILRPVLVGKDTQMPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAA 339 Query: 342 WK 343 W Sbjct: 340 WS 341 >gi|33593825|ref|NP_881469.1| hypothetical protein BP2885 [Bordetella pertussis Tohama I] gi|33600943|ref|NP_888503.1| hypothetical protein BB1958 [Bordetella bronchiseptica RB50] gi|33563898|emb|CAE43157.1| putative exported protein [Bordetella pertussis Tohama I] gi|33575378|emb|CAE32455.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 358 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 8/201 (3%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKI 203 FI A G + + M+ LFF RDG +S++L L EH + + + Sbjct: 146 QFIATQAFNIGQDTFQFLIGFGVMLYLLFFLLRDGSQLSRRLRRAVPLDEH----HKQHL 201 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R VIR+T G +A +G + G + + G+ + GVI A ++++P GA + + Sbjct: 202 FRKFTTVIRATVKGNIAVAAAQGALGGVMFSVLGIQGALLWGVIMAFLSLLPAIGAGLIW 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V++Y L+ G I+ L L+G + + +VD LRP LVG KLP +GG+ Sbjct: 262 APVAVYFLLTGAIWQGVVLILFGVLVIGMVDNVLRPLLVGKDTKLPDYVVLISTLGGMAL 321 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 GL G IGP++ AL W Sbjct: 322 FGLNGFVIGPLIAALFVACWD 342 >gi|120611907|ref|YP_971585.1| hypothetical protein Aave_3249 [Acidovorax citrulli AAC00-1] gi|120590371|gb|ABM33811.1| protein of unknown function UPF0118 [Acidovorax citrulli AAC00-1] Length = 350 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 14/226 (6%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ASEL + S+ + + F+ IDF G L + +S M+ LFF Sbjct: 129 ASELQARL----SSVTVQATQFVGGKAIDF--------GQNTLQFVVSFGIMLYLLFFLL 176 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG +++ ++ L + ++++ VIR+T G +A +G + G A+W + Sbjct: 177 RDGPALAARIRE-ATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAI 235 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + V GV+ A ++++P GA + + V++YLL G ++ L +G + +VD LR Sbjct: 236 QAPVLWGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P LVG K+P +GG+ GL G IGPV+ AL W Sbjct: 296 PVLVGKDTKMPDYVVLISTLGGMSLFGLTGFVIGPVIAALFIATWD 341 >gi|330882685|gb|EGH16834.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 321 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 11/302 (3%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP SALI G F SWP+ + + A++ + M L PL++L + Sbjct: 25 APFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + G+P P +WL+ IP G LWT + + L G Sbjct: 85 HVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + R +++ G L+ LSI+F FFFYRDG ++ + SL E L + Sbjct: 145 NWVLAR-SAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDRAQYYLD 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ + Sbjct: 200 LVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGF 319 Query: 326 LG 327 +G Sbjct: 320 IG 321 >gi|89898842|ref|YP_521313.1| hypothetical protein Rfer_0020 [Rhodoferax ferrireducens T118] gi|89343579|gb|ABD67782.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 358 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 2/202 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G F+ A G I ++ S+ + FF RDG S+++ L L P + K+ Sbjct: 147 AQGSQFLATQAMGIGQITFEFVTSLFITLYLAFFLIRDGDSVARALRH-AVPLAPEHKKE 205 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + VIR+T G ++A+ +G + G A+W GV + V+ A ++++P GA + Sbjct: 206 LIGKFTTVIRATVKGNLLVAVIQGALGGIAFWFLGVGGALLWAVLMAFLSLLPAVGAGLV 265 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+IY + G + L WG + + ++D LRP LVG ++P +GG+ Sbjct: 266 WLPVAIYFFLTGATWQGIALCAWGVLVIGLIDNLLRPILVGKDTRMPDYVVMITTLGGMV 325 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G+ G IGP + A+ +W+ Sbjct: 326 VFGINGFVIGPAIAAMFMAVWE 347 >gi|170721039|ref|YP_001748727.1| hypothetical protein PputW619_1855 [Pseudomonas putida W619] gi|169759042|gb|ACA72358.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 354 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD---SLGEHLFPAY 199 T G + A FG ++ +S M+ LFFF R+G +++++ L EH Sbjct: 141 TQGSQILATQAFSFGQGTFEFLISFGIMLYLLFFFLREGADVARRVRLAVPLPEH----Q 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 +++ +V+R+T G ++AI +G + G +W+ +PS + V+ A ++++P GA Sbjct: 197 KRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVMMAFLSLLPAVGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + V+ Y L+ G I L +G + + +VD LRP LVG ++P +G Sbjct: 257 GIIWAPVAAYFLLTGAILQGVILTAFGVLVIGLVDNLLRPILVGKDTRMPDYLILVSTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+ GL G IGP++ AL W Sbjct: 317 GLAVFGLNGFVIGPLIAALFMSSW 340 >gi|126665221|ref|ZP_01736204.1| Predicted permease PerM family protein [Marinobacter sp. ELB17] gi|126630591|gb|EBA01206.1| Predicted permease PerM family protein [Marinobacter sp. ELB17] Length = 378 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 148/338 (43%), Gaps = 16/338 (4%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R + ++ VS+ F +K FF P+ A+ I P+ + + A+I Sbjct: 8 RAFLAMLVGVSVAFILLMKPFFGPIFWAVAIALIFHPVQLKLARRFGDRPNTNALITLFL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLS 128 M + ++P+L L + E L K+ Q G P ++ + A + + Sbjct: 68 CMVIVVIPVLLLVASLVAEGIGLYQKI----QTGDVRPGEYIDQVNQSFPAIQSFLAQFD 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S L +G F+ + A G + L + M+ FF RDG S+ + L Sbjct: 124 ISFSELRDRTVNLVVSGSQFLGKQALGLGQNTFQFFLGLALMVYLAFFLLRDGVSLVELL 183 Query: 189 DS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 LG+ + K + +V R+T G +IAI +G + G +W+ G+ + G Sbjct: 184 IRALPLGDERERLLFAKFA----EVTRATVKGNLLIAIIQGAMGGLIFWILGIEGALLWG 239 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ AI++++P GA + + +IYL G++ A L +G + + + D LRP LVG Sbjct: 240 VVMAIVSLLPAVGAALVWVPAAIYLAAVGDVVQALILTAFGVVVIGLADNVLRPILVGRD 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 KLP +GG+ G+ G +GP++ AL W Sbjct: 300 TKLPDYIVLLSTLGGLAMFGINGFVMGPLVAALFNAFW 337 >gi|327480919|gb|AEA84229.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 353 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 2/200 (1%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G F+ A FG + +S M+ LFFF RDG + ++ L A ++ Sbjct: 142 EGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVARIRK-AIPLSDAQKTRL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 +V+R+T G ++A+ +G + G + + G+ + GV+ A ++++P GA + + Sbjct: 201 FNKFTRVVRATVKGNIVVAVTQGALGGIIFAVLGISGALLWGVLMAFLSLLPAVGAGLIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG+ Sbjct: 261 TPVAIYFLMTGAIWQGVILTLYGVLVIGLVDNILRPILVGKDTKMPDYVVLISTLGGLAL 320 Query: 323 MGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 321 FGLNGFVIGPLVAALFISTW 340 >gi|190410040|ref|YP_001965564.1| hypothetical protein [Sinorhizobium meliloti] gi|125631070|gb|ABN47071.1| hypothetical protein [Sinorhizobium meliloti SM11] Length = 347 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 146/307 (47%), Gaps = 7/307 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ F + +L A +I F++WP+Y + + A + T+ V + + P + Sbjct: 28 LQPFLSAILWAAVICFSTWPVYQRCERAVGGNKSLAAAVMTLLVALVLVAPFAVMVPTLT 87 Query: 87 LEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTN 144 + L++ V + G P P RW++ +P G + W + L+H + S K Sbjct: 88 DNVSNLLTAVNQILEQGPPAPPRWVAGLPVIGENLAAYW-ESLAH--NAPAFSTELKKL- 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I A G + L + + FFF+ G ++ + ++GE +K+ Sbjct: 144 -IGPATNLAVASGAVLGAGLLELGLSVFIAFFFFLHGRRMAAYVRAVGERFAGPRSRKLL 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 +V ++ G+ A+ + ++ G +W+AGVP + LG +T +++ +P G P+ + + Sbjct: 203 TVVGATVKGVIYGLIGTALAQAVLAGIGFWIAGVPQALLLGFLTFVLSFVPIGPPLVWGS 262 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+++ ++G ++ + WG I + +D +RP+++G LP L FG +GGV G Sbjct: 263 VALWFFVQGAVWWGLFVAAWGLILVSSIDNVIRPYVLGKTNNLPVLLGLFGFLGGVVAFG 322 Query: 325 LLGLFIG 331 +G+F G Sbjct: 323 FIGIFWG 329 >gi|329894051|ref|ZP_08270036.1| putative permease PerM family [gamma proteobacterium IMCC3088] gi|328923223|gb|EGG30543.1| putative permease PerM family [gamma proteobacterium IMCC3088] Length = 378 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 92/366 (25%), Positives = 156/366 (42%), Gaps = 48/366 (13%) Query: 2 RETMLNPQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 RE + +R I +I VS+ Y + FF+ +L A II P+++ + + Sbjct: 6 REPDMQKVIEIRSFIAALIAVSIAFTYLMLPFFSVILWACIIALLFHPLHAKLLDRYPRH 65 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A++ ++ + + + P LFL S + + G + + L G Sbjct: 66 ENIAALVTLLACVLIAVTPALFL-----------ASSFI---KQGTAIYQQLE---SGQL 108 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDF-----------------IPRFASRFGMIFL 161 LW + Q+ ++ E L+T G D + A G L Sbjct: 109 KPALWIDQIR--QAFPVIDE-LLRTLGFDVAEVKQQLGSLSVEAGKVMASNALLIGQNTL 165 Query: 162 DYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + +S+ M+ FF RDG I + LG+ +K + +V R+T G Sbjct: 166 GWLVSLGLMLYLTFFMLRDGARLIPILIRALPLGDERERLLMQKFA----EVTRATIKGS 221 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 ++A+ +G + G +WL +P V GV+ ++++IP GA + + V +YLL GN + Sbjct: 222 LVVAMAQGSLGGLIFWLLDLPGPVLWGVVMTVLSLIPVVGASLIWLPVGLYLLATGNTSD 281 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +GAI + +VD LRP LVG KLP +GG G+ G +GP++ L Sbjct: 282 GIILIAFGAIVIGLVDNILRPILVGRDTKLPDYLVLLSTLGGFTMFGMTGFVLGPLIAVL 341 Query: 338 IAVIWK 343 W+ Sbjct: 342 FITFWE 347 >gi|296101461|ref|YP_003611607.1| hypothetical protein ECL_01097 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055920|gb|ADF60658.1| hypothetical protein ECL_01097 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 369 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 95/370 (25%), Positives = 172/370 (46%), Gaps = 32/370 (8%) Query: 9 QGIMRWMIMFII-LVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 G+ + +FI+ LV+ F L +F+ +L A I+ P+ + + + + LA Sbjct: 4 NGLTKGFFIFILALVTWAFFDVLSPYFSAILWAAILTVIFNPVKNKLRAALGDRNG-LAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASE 121 + T+ ++CL + +PL+ +F +E+ + +K+ ++ P ++ I + WAS Sbjct: 63 LLTIGIICLIVFIPLMVIFSSLAIELNVVYTKL---QENNTQFPEVVASIFNHLPDWASG 119 Query: 122 LWTKH--LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 H + Q K LS+ L+ G ++ A G + +S M+ LFF + Sbjct: 120 FLADHNLTNAAQIQKKLSDVALQ--GGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLK 177 Query: 180 DG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 DG F + Q LDSL +HLF + V R+T G ++A+ +G + G A Sbjct: 178 DGPFLVRQILDSLPLSDFAKQHLFAKF--------VGVSRATVKGTAVVAVVQGTLGGIA 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + +AG+ + G + A ++++P G+ I + +I+L I+ + + I + + Sbjct: 230 FAIAGIDGSILWGALMAFLSLVPAVGSAIVWVPAAIFLFATHQIWQGLFIVGFFVIIVGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIK 350 VD LRP LVG K+P +GG+ G+ G IGP++ AL W S Sbjct: 290 VDNILRPLLVGKDTKMPDYLILISTLGGMELYGINGFVIGPLIAALFIACWNLFSGRDHA 349 Query: 351 ENKEKISSNF 360 N E++ + F Sbjct: 350 GNAEELDAAF 359 >gi|312796207|ref|YP_004029129.1| hypothetical protein RBRH_03616 [Burkholderia rhizoxinica HKI 454] gi|312167982|emb|CBW74985.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 414 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 90/370 (24%), Positives = 167/370 (45%), Gaps = 34/370 (9%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M N +G + ++ + L ++ L FF + I+ P+ + ++ + Sbjct: 28 MDRNTRNQRG-FQVLLYAVSLALVWILLPFFGAIFWGAILAILFQPLQRTLTARLGNRAN 86 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGML---------EMKELVSKVVLANQHGIPV----- 106 LA +AT+S +C+ +V L G L ++K V L Q + Sbjct: 87 -LAALATLS-LCVLVVILPVSLMIGTLVQEVSFAYEQIKTGQWNVTLYFQKAVGALPAFA 144 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKI-LSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WL+D+ L+ QSL+ L+E + + F+ A G L + + Sbjct: 145 QHWLNDV------------GLADMQSLQAKLTEGAARIS--QFVAAQAVEIGQNTLQFAV 190 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 M+ +FF RDG +IS+++ L ++ +K+ V+R+T G +A + Sbjct: 191 GFGIMLYMVFFLLRDGSAISRRIRE-AVPLADSHKQKLLGKFTTVVRATVKGNIAVAAVQ 249 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLW 284 GL+ G +++ G+ + G + A+++++P G+ + + +IY L+ G ++ A L L+ Sbjct: 250 GLLGGLIFFILGISGSLLWGTLMALLSLLPAIGSALVWGPAAIYFLLAGPLWKAVVLGLF 309 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ + VD LRP LVG KLP VGG+ T G+ G IGP++ AL W Sbjct: 310 CSLVIGGVDNILRPILVGKDTKLPDWVVLISTVGGMATFGINGFVIGPLIAALFIACWDI 369 Query: 345 SIMAIKENKE 354 S++ ++ Sbjct: 370 SVLIARDETH 379 >gi|162147751|ref|YP_001602212.1| putative inner membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542376|ref|YP_002274605.1| hypothetical protein Gdia_0192 [Gluconacetobacter diazotrophicus PAl 5] gi|161786328|emb|CAP55910.1| putative inner membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530053|gb|ACI49990.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 22/342 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-TVSVMCLFIVPLLFLFYYGMLE 88 F + +L A I+ F +WP+ FI + + A I TV + +PL + + + Sbjct: 25 FMSALLWAAILTFATWPL---FIRLRRRTGPVTAAIGMTVLSALVVALPLAVVVSTSIAD 81 Query: 89 MK---ELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTK---HLSHPQSLKILSETFL 141 + E +++ + H P WL+ IP G +++WT+ L H + + + + Sbjct: 82 LPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAKIWTQWATDLGHAERMLLPYTGSI 141 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + AS G++ L L I F FF+ G S+ ++ + +Y Sbjct: 142 AQSMLAGLMQVAS--GLVHLGMALFIAF------FFWLGGDSLGGTFSAVIRRIAGSYAD 193 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I I+ + IR T G+ AI +G++ G + L G+P V G+ITA +A++P GAP+ Sbjct: 194 RILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFGLITACVAVLPIGAPLI 253 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++ L++ + L ++G + + D +RP + +LP+L T G++GGV Sbjct: 254 WIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGAQLPYLLTVLGVLGGVW 313 Query: 322 TMGLLGLFIGPVLMALIAVIWKE---SIMAIKENKEKISSNF 360 T G LG+F+GPVL+ + + E + N I NF Sbjct: 314 TFGGLGIFLGPVLLGVGYTLTAEFAANGSGHTGNATPIQENF 355 >gi|262043269|ref|ZP_06016400.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039368|gb|EEW40508.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 341 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 27/326 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI-VPLLFLFYYGMLEM 89 ++ +L A I+ P+ + ++ E + LA + T+ ++CL + PL + E+ Sbjct: 2 YSAILWAAILAVIFNPVKNKIRTRLGERNG-LAALMTIVIICLIVFTPLAIILSSLAYEL 60 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL--SHPQSLKILSETFLKTNG 145 + SK+ N P V + +PG WA H S Q + LS+ LK G Sbjct: 61 NLVYSKLQ-HNDTQFPTVVASLFAHLPG--WARSFLADHNLDSAQQIQQQLSDAALK--G 115 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQLDSL------GEHLFPA 198 ++ A G + +S M+ LFF +DG + + L+SL +HLF Sbjct: 116 GQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLILESLPLSSYVKQHLFAK 175 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 + V R+T G +A+ +G + G A+W+AG+ + G + A +++IP G Sbjct: 176 F--------AAVARATVKGTVAVALAQGALGGFAFWIAGLDGSILWGALMAFLSLIPAVG 227 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + I + +IYL G ++ + + I + +VD LRP LVG ++P + Sbjct: 228 SAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTRMPDYLILIATL 287 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 GG+ G+ G IGP++ AL W Sbjct: 288 GGMEIYGINGFVIGPLIAALFIACWN 313 >gi|148258479|ref|YP_001243064.1| hypothetical protein BBta_7289 [Bradyrhizobium sp. BTAi1] gi|146410652|gb|ABQ39158.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 353 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 25/340 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F+ +L +++ P+Y ++ + A + ++ L I+PL L E Sbjct: 27 FYGAILWSVVAAVVFAPLYRRLSQAMQQRHSLAAAATVMIIVTLVILPLTLLSVTLAREA 86 Query: 90 KELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL-------SETFL 141 + +V Q G + + R I G+ W + L IL S L Sbjct: 87 SNVYGRV----QSGELDLVRSFQQILDGL---PDWMARVLDHFGLAILGGVQEKLSSVLL 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K G F+ G + +++ M+ LFF +RD ++S+++ + P + Sbjct: 140 K--GSQFLAAQTLDIGQRTFGFLVNLFVMLCLLFFLFRDENTLSKRV----KDAIPLRPE 193 Query: 202 KISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 ++ ++ K VIR+T G ++A+ G + G + L G+ + + V+ A ++++P G Sbjct: 194 RLDALLLKFTIVIRATVKGNLLVALLLGALGGLMFSLLGINASLLWAVLIAFLSLLPAIG 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + + V++YLL G I+ L ++GA+ + +VD LRP LVG K+P FF + Sbjct: 254 SGLVWVPVAVYLLATGAIWQGVVLIVYGALVIGLVDNLLRPMLVGKDTKMPDYVVFFSTL 313 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GG+ G+ G IGPV+ A+ W+ + + N + I+ Sbjct: 314 GGIEAFGINGFVIGPVIAAMFIAAWETFSVLRQRNDDAIA 353 >gi|193211909|ref|YP_001997862.1| hypothetical protein Cpar_0235 [Chlorobaculum parvum NCIB 8327] gi|193085386|gb|ACF10662.1| protein of unknown function UPF0118 [Chlorobaculum parvum NCIB 8327] Length = 368 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 19/333 (5%) Query: 20 ILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +L+S FL + F +L A I ++P++S F+S E + A++ + + Sbjct: 19 LLISALFLAMIRHFLVTILLAGIFAGLAYPLFSRFLSLSGERRSLSAILTLTIFFLIVFM 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 PL+ +F + + L V+ + + P L + G L H S IL Sbjct: 79 PLVAVFSIVVGQAISLSKTVIPLVRDQLQDPEALPSLISG-----LPFYHDIEKYSDLIL 133 Query: 137 SE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L G I F++ D L IIF +FF RDG ++ ++ ++ Sbjct: 134 GRIAEVLGNLGTTVISSFSAFTWSALYDIALFIIFWY-TMFFLLRDGHTLMAKI----QN 188 Query: 195 LFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P R++ + V R++ G IIA+ +G + G A+ +AG+ + V G I A++ Sbjct: 189 YLPLAENDQKRLLDRFVSVTRASLKGSLIIAVVQGSLAGLAFHVAGIENAVFWGAIMAML 248 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P G+P+ + I GN A L L+ +I + +D +RP LVG + L Sbjct: 249 SILPLIGSPLIWVPAVIIQAFSGNYVEAIGLLLFCSIVVGQIDNVMRPILVGRDTSMHEL 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 FFG +GG+ GL G IGPV+ AL +W Sbjct: 309 FIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWD 341 >gi|241763379|ref|ZP_04761434.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] gi|241367421|gb|EER61732.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] Length = 357 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 18/341 (5%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R ++ + LV+L F L F V +++ P + + ++ S LA +AT+ Sbjct: 9 RVFLILLTLVTLAFGAILWQFHGAVFWGVVLAILFTPFHRKLL-RRMPGSPNLAALATLG 67 Query: 70 VMCLFIVPL-LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +CL IV L + L +++ + + + Q + ++L I M A W L Sbjct: 68 -LCLVIVILPMTLISLSLVQEATGIYDRLKSGQ--LNFGQYLQQILDAMPA---WAAGLL 121 Query: 129 HPQSLKILSETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +L L E K + + F A G L++ + M+ LFF RDG + Sbjct: 122 DRFNLTTLGELQEKLSSVAVQASQFFATKALSIGQNTLEFVVGFGVMLYLLFFLLRDGSA 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ +++ L + ++++ VIR+T G ++A +G + G +W+ G+ V Sbjct: 182 LAARINR-ATPLDTEHKRQLASKFTTVIRATVKGNIVVAASQGALGGLIFWILGIQGPVL 240 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV A ++++P GA + + V++Y L G ++ L L+G + +VD LRP LVG Sbjct: 241 WGVAMAFLSLLPAVGAGLVWGPVALYFLATGAVWQGVVLALYGVGVIGLVDNILRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 K+P +GG+ GL G IGP + AL W Sbjct: 301 KDTKMPDYVVLISTLGGMALFGLTGFVIGPAIAALFIASWD 341 >gi|310767844|gb|ADP12794.1| hypothetical protein EJP617_31130 [Erwinia sp. Ejp617] Length = 372 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 94/377 (24%), Positives = 166/377 (44%), Gaps = 46/377 (12%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 QG+ + +FI+ ++ L+ L +F+ +L A I+ P+ S I K LA Sbjct: 4 QGMSKGFFIFILAITTLGFLHILGPYFSAILWAAILAIIFHPLKSK-IGKYCGDRNGLAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASE 121 + T+ ++CL + +PL + +E L +++ ANQ + ++ +P Sbjct: 63 MLTLLIICLIVFIPLAVVASSLAVEFNALYNRIQ-ANQTELTTVATSVVNHLPE------ 115 Query: 122 LWTKHLSHPQSLKILSETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W +H +L + K +G+ F G + + M+ LFF Sbjct: 116 -WLRHFLAENNLTDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFF 174 Query: 177 FYRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +DG + + LD++ HLF + V R+T G +A+ +G + Sbjct: 175 LLKDGAYLVGMALDAIPLSRFVKHHLFVKF--------AAVSRATVKGTVAVAVVQGTLG 226 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G A+W AG+ + G + A +++IP G+ I + V I+LL G + L + + Sbjct: 227 GIAFWCAGIQGSILWGSLMAFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVV 286 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW-----K 343 + +VD LRP LVG K+P +GG+ G+ G IGP++ AL W + Sbjct: 287 IGLVDNILRPLLVGKDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGR 346 Query: 344 ESIMAIKENKEKISSNF 360 ES + N ++I S+F Sbjct: 347 ES----RGNTDEIDSDF 359 >gi|85710071|ref|ZP_01041136.1| membrane protein, putative [Erythrobacter sp. NAP1] gi|85688781|gb|EAQ28785.1| membrane protein, putative [Erythrobacter sp. NAP1] Length = 400 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 147/339 (43%), Gaps = 23/339 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F PV+ A + P+Y ++K + A++S++ +F+ LL + G L + Sbjct: 46 FVGPVMWAALAAIMFQPLYKWSLTKTRGRRN---IAASLSLLIIFVAVLLPALWIGSLVL 102 Query: 90 KELVSKVVLANQHGIPVPRWLSDI----PGGMWASEL---WTKHLSHPQSLKILSETFLK 142 E V + + I + + ++ I P + L WT L E+ L Sbjct: 103 DEAVGVINALQANPIDIAQTVNSIFSILPDSLQRMALENGWTNVSVMQDRL----ESLLG 158 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + A G L + LS + LFF RDG I + + H P + Sbjct: 159 ESA-GLIAQSAVSIGSGALGFFLSFGIGLYVLFFLLRDGSRIGETI----LHSAPIEREI 213 Query: 203 ISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 R+ + ++R+ G ++ + +G + G LAGVPS + LGV+ AI+A+IP G Sbjct: 214 ADRLADRFLGIVRAVIKGSGVVGLVQGTLGGIMLALAGVPSALLLGVLMAILALIPAVGT 273 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + I+L+I G ++ + G I + VD LRP LVG +P +G Sbjct: 274 ALVWAPAGIWLIIAGEVWTGAFVLAAGTIVIASVDNVLRPILVGRDTGIPDWIVLVTTLG 333 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G G+ +GP++ L W E++E I+ Sbjct: 334 GISLAGFSGIVLGPLVAGLFLASWSILQEQRAEDEEAIA 372 >gi|294101585|ref|YP_003553443.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] gi|293616565|gb|ADE56719.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] Length = 402 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 12/178 (6%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDS-----LGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 +I +++A FF RDG I ++ L E A++ + +I+ VI G+T+ Sbjct: 197 QLIVIVVASFFMIRDGHIILDYVNDIVPLPLKEK--EAFFNRAKQILQAVI----YGITL 250 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 A +G + +W G+PS G + A++AMIP G P+ + +IYL G I A Sbjct: 251 TAGVQGFLGALGWWYVGLPSPAVFGAVMALLAMIPFIGTPLVWGPGAIYLFYSGQIKEAL 310 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +WG I + +VD +RP + G K L F G+VGG+ + G LGLF+GP++++L Sbjct: 311 ILAIWGLIVVSMVDNFIRPIFISGGGKAHVLIIFIGVVGGLASWGFLGLFLGPLVISL 368 >gi|194334809|ref|YP_002016669.1| hypothetical protein Paes_2012 [Prosthecochloris aestuarii DSM 271] gi|194312627|gb|ACF47022.1| protein of unknown function UPF0118 [Prosthecochloris aestuarii DSM 271] Length = 363 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 8/174 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLG 230 +FFF RDG + QQ + P SR++ K V R+T G +I I +G + G Sbjct: 169 MFFFLRDGRDMLQQ----ALYYMPLNQSDQSRMLDKFTSVTRATIRGTFVIGIIQGTLAG 224 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 A+ +AG+ S V G I ++++IP G+ + + +YL G AT L ++ I + Sbjct: 225 LAFQVAGIESAVFWGAIMTVLSVIPVVGSGLVWVPAVLYLYATGENVAATGLLIFCGILV 284 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +D LRP LVG ++ L FFG +GG+ G+ G +GP++ AL +W+ Sbjct: 285 SSIDNILRPVLVGRDTRMHELLIFFGTIGGIGLFGIAGFIVGPIIAALFITVWE 338 >gi|283784810|ref|YP_003364675.1| putative outer membrane protein [Citrobacter rodentium ICC168] gi|282948264|emb|CBG87835.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 370 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 95/372 (25%), Positives = 173/372 (46%), Gaps = 36/372 (9%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 G+ + +F+++V + L +F+ +L A I+ +P+ + + + + LA Sbjct: 4 NGLTKGFFLFLLVVVTWAFFDVLSPYFSAILWAAILTVIFYPVKNKLRTALGDRNG-LAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASE 121 + T+ ++CL + +PL + E+ V V L N + P ++ + M WA E Sbjct: 63 LLTLGIICLIVFIPLALILSSLAFELN--VVYVKLQNNNA-QFPEVIASLFAHMPDWARE 119 Query: 122 LWTKH--LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 H S + + LSE LK G ++ A G + +S M+ LFF + Sbjct: 120 FLADHNLDSAAEIQQKLSEVALK--GGQYLAGSAFLIGKGTFGFAISFGVMLYLLFFLLK 177 Query: 180 DG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 DG F + Q LDSL +HLF + V R+T G ++AI +G + G A Sbjct: 178 DGPFLVRQILDSLPLSNFVKQHLFAKF--------AGVSRATVKGTVVVAIVQGTLGGIA 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +++AG+ + G + A +++IP G+ I + +I+L ++ + + + + + Sbjct: 230 FYIAGIEGSILWGALMAFLSLIPAVGSAIVWGPAAIFLFSTQQLWQGFFIVGFFVVVVGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 VD LRP LVG K+P +GG+ G+ G IGP++ AL W +I++ ++ Sbjct: 290 VDNILRPILVGKDTKMPDYLILITTLGGMEIYGINGFVIGPLVAALFIACW--NILSGRD 347 Query: 352 ---NKEKISSNF 360 N E++ F Sbjct: 348 HEGNAEELDKEF 359 >gi|113866712|ref|YP_725201.1| membrane spanning protein/permease [Ralstonia eutropha H16] gi|113525488|emb|CAJ91833.1| hypothetical membrane spanning protein/Predictedpermease [Ralstonia eutropha H16] Length = 385 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 84/354 (23%), Positives = 151/354 (42%), Gaps = 36/354 (10%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL L F +L I+ F+SW Y+ + A+I + + + P ++ Sbjct: 23 SLLVLAPFTTALLWGAILAFSSWYPYTVLSRWLGNRRSLAALICVLLATVVVLGPFVYAG 82 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + EL + V +HGIP +P WLS +P +L + + I +++ + Sbjct: 83 ASFSAHLDELSALVDRYREHGIPQLPAWLSSLP-------YVGSYLQNSWNSVINADSEM 135 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDG--------FSISQ 186 N + + + G + L LSI II FFFY G + + Sbjct: 136 VAN----LRKLIAPVGHMLLGAGLSIGAGLGQLALSIILAFFFYTGGELAIAWLRAGMHR 191 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +HL + +V V+ + F+ + IG W+AGVP LG Sbjct: 192 IAGERADHLLELAGSTVKGVVYGVLGTAFIQAVLAGIG--------LWIAGVPGAAILGF 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T +++IP G P+ + +++L G A L +WG + + D ++P L+ Sbjct: 244 VTFFLSVIPVGPPLVWLPAALWLYHTGATGWAIFLVVWGVGVVSMADNIVKPLLISKGTG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSN 359 +P + G++GG G LG+FIGP L+A+ + ++ +I + E K+ + + Sbjct: 304 MPLIWIMLGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQAEVKQDLKQS 357 >gi|330899208|gb|EGH30627.1| hypothetical protein PSYJA_17246 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 319 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 7/304 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 20 CLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLG 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + +++ + G+P P +WL+ IP G LWT + + Sbjct: 80 FNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPH 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G ++I +++ G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 140 LGQVG-NWILARSAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGERA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P+ Sbjct: 195 QYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPPL 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 255 VWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGL 314 Query: 321 RTMG 324 G Sbjct: 315 LAFG 318 >gi|167032838|ref|YP_001668069.1| hypothetical protein PputGB1_1830 [Pseudomonas putida GB-1] gi|166859326|gb|ABY97733.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 354 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD---SLGEHLFPAY 199 T G + A FG ++ +S M+ LFFF R+G +++++ L EH Sbjct: 141 TQGSQALASQAFSFGQGTFEFVISFGIMMYLLFFFLREGPEVARRVRLAVPLPEH----Q 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 +++ +V+R+T G ++AI +G + G +W+ +PS + V+ A ++++P GA Sbjct: 197 KRRLQLKFNRVVRATVKGNVLVAITQGALGGLIFWVLDIPSALVWAVLMAFLSLLPAVGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + V+ Y L+ G I L +G + + +VD LRP LVG ++P +G Sbjct: 257 GIVWAPVAAYFLLTGAILPGVILTAFGVLVIGLVDNLLRPILVGKDTRMPDYLILVSTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+ GL G IGP++ AL W Sbjct: 317 GLAVFGLNGFVIGPLIAALFMSSW 340 >gi|330015775|ref|ZP_08308269.1| hypothetical protein HMPREF9538_05993 [Klebsiella sp. MS 92-3] gi|328530551|gb|EGF57419.1| hypothetical protein HMPREF9538_05993 [Klebsiella sp. MS 92-3] Length = 369 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 26/342 (7%) Query: 15 MIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ ++ + L +++ +L A I+ P + + E + LA + T+ ++CL Sbjct: 13 LIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPDKNKPRPRLGERNG-LAALMTIVIICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL--SH 129 + PL + E+ + SK+ + Q V + +PG WA H S Sbjct: 72 IVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPG--WARSFLADHNLDSA 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQL 188 Q + LS+ LK G ++ A G + +S M+ LFF +DG + + L Sbjct: 130 QQIQQQLSDAALK--GGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLIL 187 Query: 189 DSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +SL +HLF + V R+T G +A+ +G + G A+W+AG+ + Sbjct: 188 ESLPLSSYVKQHLFAKF--------AAVARATVKGTVAVALAQGALGGFAFWIAGLDGSI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A +++IP G+ I + +IYL G ++ + + I + +VD LRP LV Sbjct: 240 LWGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G ++P +GG+ G+ G IGP++ AL W Sbjct: 300 GKDTRMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|260596705|ref|YP_003209276.1| hypothetical protein CTU_09130 [Cronobacter turicensis z3032] gi|260215882|emb|CBA28407.1| hypothetical protein CTU_09130 [Cronobacter turicensis z3032] Length = 367 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/384 (25%), Positives = 168/384 (43%), Gaps = 51/384 (13%) Query: 6 LNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N + + R + I+ + +VS+ F +K + + VL A+I+ +P+ + Sbjct: 1 MNSKEMSRAFFILILFIVSILFFNLVKPYLSAVLWAVILAVIFYPVKRRLCHMMNGRNNI 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----IPGGM 117 +++ V + L VPL + + E L + + + P L+D +P Sbjct: 61 ASLLTVVLICVLVFVPLAVVASSLVREFNTLYTDL---QANDTTFPTLLADGVRILPD-- 115 Query: 118 WASE-LWTKHLSHPQSL-KILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIF---- 169 WA + L HL ++ K +S LK G ++ G IFL S++ Sbjct: 116 WAQQMLAENHLDSAAAIQKKISGVALK--GSQYVA------GSIFLISRNTFSVVIGFGI 167 Query: 170 MIIALFFFYRDGFSISQQL-------DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 M+ LFF +DG + + D + + LF R V R+T G ++A Sbjct: 168 MLYLLFFLLKDGSRLVAVVLNAVPLSDKVKQRLF--------RRFAAVSRATVKGTVVVA 219 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 I +GL+ G A++ AG+ + + G + A ++++P GA + + IYL G I A L Sbjct: 220 IVQGLLGGVAFYFAGIGASILWGSLMAFLSLVPAVGAALIWVPAVIYLFTTGAIIKAVLL 279 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + + D LRP LVG I++P +GG+ G+ G +GP++ AL Sbjct: 280 TAFFVVVVGLADNLLRPLLVGKDIRMPDWLILLATLGGLEVYGINGFVVGPLIAALFVTC 339 Query: 342 WKE------SIMAIKENKEKISSN 359 W A+ ENKE +S Sbjct: 340 WNTFSAGPGRTHALPENKENGASE 363 >gi|187923378|ref|YP_001895020.1| hypothetical protein Bphyt_1381 [Burkholderia phytofirmans PsJN] gi|187714572|gb|ACD15796.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 371 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 13/340 (3%) Query: 5 MLNPQGIMRWMIMF--IILV--SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q I R +F IILV SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A + + ++ + + P ++ + + E+V+ V + G+P +P W++ IP G Sbjct: 61 GAATLIVLIILIVVLGPFVYAGFAFGAHVHEIVALVQRLFEAGLPDLPPWVARIPLVGSN 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL-FFF 177 W + S L T G + I + + L ++ + I L FFF Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAA------AIAVTHGLGLLALSIVLAFFF 174 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y G + L++ + + + ++ G+ A+ +G++ G W+AG Sbjct: 175 YTGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAG 234 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP+ LG+ T +++IPGG + + +I+L G A L +WG + + + D ++ Sbjct: 235 VPAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLAVGMSDNVIK 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 P L+G +P + G++GG G LG+FIGP L+A+ Sbjct: 295 PILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAV 334 >gi|306845823|ref|ZP_07478391.1| transmembrane protein [Brucella sp. BO1] gi|306273715|gb|EFM55553.1| transmembrane protein [Brucella sp. BO1] Length = 352 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 86 TSLYQRLSSREFDINSY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 140 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 197 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L L G + + +VD LRP LVG ++P VGG+ Sbjct: 257 WTPAAVWFFVSGDWWSGAILVLVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 317 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|163857030|ref|YP_001631328.1| hypothetical protein Bpet2718 [Bordetella petrii DSM 12804] gi|163260758|emb|CAP43060.1| putative membrane protein [Bordetella petrii] Length = 360 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 16/208 (7%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLF 196 G ++ A G + +S M+ LFF RDG +S +L DS HL Sbjct: 142 RGSQYLATQAFNIGQDTFQFLISFGIMLYLLFFLLRDGSLLSARLRAAIPLSDSRKIHLL 201 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 R VIR+T G +A +G + G +++ G+ V GV+ A ++++P Sbjct: 202 --------RKFTTVIRATVKGNIAVAAAQGALGGVIFYVLGIQGPVLWGVVMAFLSLLPA 253 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA + + V++Y L+ G + L L+G + + +VD LRP LVG KLP Sbjct: 254 IGAGLIWVPVAVYFLVTGATWQGVALILYGVLVIGMVDNVLRPLLVGKDTKLPDYVVLIS 313 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ GL G IGP++ AL W Sbjct: 314 TLGGMALFGLNGFVIGPLIAALFITCWD 341 >gi|94312981|ref|YP_586190.1| hypothetical protein Rmet_4053 [Cupriavidus metallidurans CH34] gi|93356833|gb|ABF10921.1| conserved hypothetical protein; putative inner membrane protein (permease) [Cupriavidus metallidurans CH34] Length = 361 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 5/225 (2%) Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 LS + L+ + F+ A G + +S M+ LFF RDG +S+++ + L Sbjct: 137 LSASALQAS--QFVATRALSIGQNTAQFVISFGIMLYLLFFLLRDGPRLSRKIRT-AVPL 193 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 Y + + + V+R+T G +A+ +G + G + + G+ + GVI A ++++P Sbjct: 194 SDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGALLWGVIMAFLSLLP 253 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 GA + + V++Y L+ G+ L +G + + +VD LRP LVG ++P Sbjct: 254 AVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILVGKDTQMPDYVVLI 313 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ GL G IGP++ AL W + I EN + I SN Sbjct: 314 STLGGMALFGLNGFVIGPLIAALFIACWDLNAHGIDENGD-IGSN 357 >gi|322419533|ref|YP_004198756.1| hypothetical protein GM18_2017 [Geobacter sp. M18] gi|320125920|gb|ADW13480.1| protein of unknown function UPF0118 [Geobacter sp. M18] Length = 354 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/337 (22%), Positives = 141/337 (41%), Gaps = 35/337 (10%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+ LIIG + P Y+ + + A ++V F++P+ L + E Sbjct: 32 PLAWGLIIGIATMPHYNRLLHRSPAHPGRCAGAMVLAVAVCFVLPVTALVITAAVNAPEW 91 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF---- 148 + A Q + R + G + Q+L L + F GID Sbjct: 92 YKQ---AEQLVTTLTRSGTAAMG----------QFPYAQNLTSLVDRF----GIDLAGIG 134 Query: 149 ----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI-SQQLDSLGEHLFP 197 I A+ +++ +++ + LFF YRDG + S + L P Sbjct: 135 GKIAASSSGIILGLAADLARNMMNFIGTLLIALFILFFIYRDGDRVVSLCIGRLAPD--P 192 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 ++ + + + + +G + +G + G YW+A VP+ + G +TAI A+IP Sbjct: 193 RKAQRFATEIRSITTAVVVGTVLTCAAQGAIAGVGYWVADVPAPIFFGTLTAIAALIPVV 252 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I + ++ ++ + G+ A L W I + D +RP +G + L G Sbjct: 253 GTAIIWVPLAGFMALSGSYLTAALLAGWCLIFVGFADNAIRPLAIGASSDISTLAVVLGA 312 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +MGLLGL +GPV+ A++ +W +++ ++ Sbjct: 313 ICGAMSMGLLGLIVGPVIFAILFSMWDDAVAEVEATD 349 >gi|306840623|ref|ZP_07473375.1| transmembrane protein [Brucella sp. BO2] gi|306289361|gb|EFM60597.1| transmembrane protein [Brucella sp. BO2] Length = 351 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 86 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 140 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 197 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L L G + + +VD LRP LVG ++P VGG+ Sbjct: 257 WTPAAVWFFVSGDWWSGAILVLVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 317 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|86747614|ref|YP_484110.1| hypothetical protein RPB_0488 [Rhodopseudomonas palustris HaA2] gi|86570642|gb|ABD05199.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 371 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G ++ A G +D+ +++ M+ LFF RDG I+ +L P + Sbjct: 140 RGSQYLAGQALTIGQSTVDFTVNLFVMLYLLFFLLRDGDLIAGRL----RRGLPLSVDQQ 195 Query: 204 SRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + ++ K VIR+T G +IA+ +G + G A+++ G+ + V+ A ++++P GA Sbjct: 196 NLLLNKFTVVIRATVKGNMLIALIQGALGGLAFYVLGIGGALLWAVVMAFVSLLPAVGAG 255 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V++YL+ G+++ L +GA+ + +VD LRP LVG ++P +GG Sbjct: 256 LVWAPVAVYLIATGSMWQGILLIAYGALVIGMVDNVLRPVLVGKDTRMPDYVVLISTLGG 315 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 ++ GL G IGPV+ A+ +W Sbjct: 316 LQVFGLNGFVIGPVIAAMFIAVWD 339 >gi|222111100|ref|YP_002553364.1| hypothetical protein Dtpsy_1907 [Acidovorax ebreus TPSY] gi|221730544|gb|ACM33364.1| protein of unknown function UPF0118 [Acidovorax ebreus TPSY] Length = 352 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 12/299 (4%) Query: 62 LAVIATVSVMCLFIVPL-LFLFYYGMLEMKELVSKVVLANQ--HGIPVPRWLSDIPGGMW 118 LA +AT+ V CL IV L + L +++ + + + Q G + + L+ +P W Sbjct: 60 LAALATLGV-CLVIVILPVTLIGASLVQEASVAYERARSGQLNFGAYLQQVLAALPP--W 116 Query: 119 ASELWTK-HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 EL + HL+ L+ T + F+ A G L + +S M+ LFF Sbjct: 117 MLELLDRFHLTTRAELQA-RLTTIGAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFL 175 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RDG ++ ++ L + ++++ VIR+T G ++A +G + G +WL Sbjct: 176 LRDGARLAARIRE-AIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLN 234 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V GV+ A ++++P GA + + V+IY L G A L +G + +VD L Sbjct: 235 IQGPVMWGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVL 294 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 RP LVG KLP +GG+ GL G IGP++ AL W + A + E+ Sbjct: 295 RPVLVGKDTKLPDYVVLISTLGGMALFGLTGFVIGPMIAALFIATW--DLFAPHDGSER 351 >gi|121594188|ref|YP_986084.1| hypothetical protein Ajs_1821 [Acidovorax sp. JS42] gi|120606268|gb|ABM42008.1| protein of unknown function UPF0118 [Acidovorax sp. JS42] Length = 381 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 12/299 (4%) Query: 62 LAVIATVSVMCLFIVPL-LFLFYYGMLEMKELVSKVVLANQ--HGIPVPRWLSDIPGGMW 118 LA +AT+ V CL IV L + L +++ + + + Q G + + L+ +P W Sbjct: 89 LAALATLGV-CLVIVILPVTLIGASLVQEASVAYERARSGQLNFGAYLQQVLAALP--PW 145 Query: 119 ASELWTK-HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 EL + HL+ L+ T + F+ A G L + +S M+ LFF Sbjct: 146 MLELLDRFHLTTRAELQA-RLTTIGAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFL 204 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RDG ++ ++ L + ++++ VIR+T G ++A +G + G +WL Sbjct: 205 LRDGARLAARIRE-AIPLDARHKEQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLN 263 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V GV+ A ++++P GA + + V+IY L G A L +G + +VD L Sbjct: 264 IQGPVMWGVLMAFLSLLPAVGASLIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVL 323 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 RP LVG KLP +GG+ GL G IGP++ AL W + A + E+ Sbjct: 324 RPVLVGKDTKLPDYVVLISTLGGMALFGLTGFVIGPMIAALFIATW--DLFAPHDGAER 380 >gi|261340952|ref|ZP_05968810.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] gi|288316812|gb|EFC55750.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] Length = 369 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 28/348 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI-VPLLFLFYYG 85 L +F+ +L A I+ P+ + + E + LA T+ ++CL + +PL + Sbjct: 26 LSPYFSAILWAAILTIIFNPVKNKLRTALGERNG-LASFLTLCIICLIVFIPLTVILSSL 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH--LSHPQSLKILSETFL 141 +E+ + +K+ Q+ P ++ + + WAS H + + K LS+ L Sbjct: 85 AIELNVVYTKL---QQNNTQFPEVVAGVFNRLPDWASGFLADHDLTNAAEIQKKLSDAAL 141 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQLDSL------GEH 194 K G ++ A G + +S M+ LFF +DG + + Q LDSL +H Sbjct: 142 K--GGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVRQILDSLPLSDFAKQH 199 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 LF + V R+T G ++A+ +G + G A+ + G+ + G + A ++++ Sbjct: 200 LFAKF--------VGVSRATVKGTAVVAVVQGTLGGIAFAIVGIDGSILWGALMAFLSLV 251 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G+ I + +IYL I+ + + I + +VD LRP LVG K+P Sbjct: 252 PAVGSAIVWVPAAIYLFATHQIWQGLFIVGFFVIIVGLVDNILRPLLVGKDTKMPDYLIL 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S + N E++ + F Sbjct: 312 ISTLGGMELYGINGFVIGPLIAALFIACWNLFSGRDHEGNAEELDAEF 359 >gi|27904620|ref|NP_777746.1| putative inner membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46397200|sp|Q89AW1|Y117_BUCBP RecName: Full=UPF0118 membrane protein bbp_117 gi|27904017|gb|AAO26851.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 368 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 157/337 (46%), Gaps = 10/337 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 RE M PQ I + +FI+++S L+ ++ FF A ++ +WPI+ + Sbjct: 5 REGMDLPQVIFSLVFIFIMIISSLWIMRPFFLGFAWASMVVVATWPIFLKLQILLWGNRA 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 V+ T S++ +FI+P++ L +++ V + +++ P WL DIP G+ Sbjct: 65 CAVVMMTFSLLLVFIIPIVCL-VNSLIDNSTSVISWLSSDKFRFPSLEWLQDIPIIGIKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + K L+ + I +F A FG + L +IFM+I Y Sbjct: 124 FSSYQKLLNEGGAELITKVQPYMGKTTEFFVIQAGHFG----RFILHLIFMLIFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + + L + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 180 NGEKVQSVIRHFAIRLGSKSGDSVVLLAGQAIRAVALGVVVTALVQGILSGIGLAISGIP 239 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ I ++ G P+ A+ I+L G T L +W + + I+D LRP Sbjct: 240 YSSLLMMLIIIFCLVQLGPLPVLIPAI-IWLYWNGKTTWGTVLLIWSCV-VCILDHILRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L+ + LP + G++GG+ G++GLFIGPV++ Sbjct: 298 ILIRIGVDLPTVLILSGVIGGLIAFGMIGLFIGPVVL 334 >gi|329908669|ref|ZP_08274912.1| hypothetical protein IMCC9480_3662 [Oxalobacteraceae bacterium IMCC9480] gi|327546658|gb|EGF31619.1| hypothetical protein IMCC9480_3662 [Oxalobacteraceae bacterium IMCC9480] Length = 352 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 12/184 (6%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWL 235 RDG ++S ++ H P ++ ++V K VIR+T G ++A +G + G +W Sbjct: 177 RDGAALSARI----RHAIPLEREQKKQLVAKFATVIRATVKGNIVVAASQGTLGGLMFWF 232 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+ + GV+ A+++++P GA + + V+IY L+ G I+ L +G + + +VD Sbjct: 233 LGIQGALLWGVLMAVLSLLPAIGAALIWGPVAIYFLLTGAIWQGVTLIAFGVLVIGLVDN 292 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LRP LVG ++P +GG+ GL G +GP + A+ W + K+ Sbjct: 293 ILRPVLVGKDTQMPDYVVLISTIGGISVFGLSGFVVGPSIAAMFMAAWT----LLDREKD 348 Query: 355 KISS 358 ++ S Sbjct: 349 QVRS 352 >gi|146339666|ref|YP_001204714.1| hypothetical protein BRADO2660 [Bradyrhizobium sp. ORS278] gi|146192472|emb|CAL76477.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS278] Length = 359 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 VIR+T G +A+ +G + G +W G+ + + V+ A M+++P GA I + V++Y Sbjct: 205 VIRATMKGNLAVALAQGALGGLIFWFLGITAPLLWAVVMAFMSLLPAVGAGIVWFPVALY 264 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LL G+I++ L +GA+ + +VD LRP LVG K+P +GG+ GL G Sbjct: 265 LLATGSIWHGVILIAYGALVIGLVDNLLRPILVGQDTKMPDYVVLLSTLGGIEVFGLNGF 324 Query: 329 FIGPVLMALIAVIWKESIMAIKENK 353 IGPV+ A+ +W + EN+ Sbjct: 325 IIGPVIAAMFIAVWDMFTVVRSENR 349 >gi|226943150|ref|YP_002798223.1| hypothetical protein Avin_10160 [Azotobacter vinelandii DJ] gi|226718077|gb|ACO77248.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 364 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 25/312 (8%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE-MKELVSK 95 A ++ F SWP+ ++ + A + T + L VPLL LF + +++ ++EL Sbjct: 34 AAVLAFASWPLMRLLTARLNGRESVAAGLLTAGWVILVAVPLL-LFGFNLVDYIRELTGL 92 Query: 96 VVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + G+P P WL+ +P G +LW +L + +L G + R A Sbjct: 93 INTLRLEGLPPPPEWLAGMPLFGDELVDLWRTVDQQGLALFATLKPYLGQVGNWLLARSA 152 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL--------GEHLFPAYWKKISR 205 G + L+ LS++ + FFFYRDG + + + SL EH + R Sbjct: 153 KLAGGM-LELALSLVLV----FFFYRDGPRLERFVQSLLTRLIGERAEHYLELVAATVQR 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V VI + + IG +W+AGVP + LG++T +++IP G P+++ Sbjct: 208 VVNGVIGTAAAQSALALIG--------FWIAGVPGALLLGLLTFALSLIPMGPPLAWIPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ +G+ A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 260 TAWLVWQGDYGYAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVVVLLGVFGGIYAFGF 319 Query: 326 LGLFIGPVLMAL 337 +GLF+GP L+A+ Sbjct: 320 MGLFLGPTLLAV 331 >gi|264678266|ref|YP_003278173.1| hypothetical membrane protein [Comamonas testosteroni CNB-2] gi|262208779|gb|ACY32877.1| hypothetical membrane protein [Comamonas testosteroni CNB-2] Length = 368 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 20/320 (6%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN----- 100 P++ + + T A+ + + + I+PL + + E + ++ N Sbjct: 22 PLHRKLLMRMPNKPTLAALATLLISLVMVILPLSLIGLSLIKETAAIYDRISSGNLSAGS 81 Query: 101 ---QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 Q +P WL+ W +L L Q+ LS L+ + A G Sbjct: 82 YVEQVFNALPSWLTP-----WMEKLHLGTLEEIQT--KLSNIALQAS--KLAATKAVGLG 132 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 L + + M+ +FF RDG + ++ + L P + ++++ VIR+T G Sbjct: 133 QNTLGFVVGFGVMLYLIFFLLRDGKELVARIWA-ATPLAPEHKRELAIKFITVIRATVKG 191 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A +G + G +WL G+ V V+ A ++++P GA + + V+IY L G + Sbjct: 192 NLAVAAAQGALGGLIFWLLGIQGAVLWAVVMAFLSLLPAVGAGLVWGPVAIYFLATGAVT 251 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L +G + + +VD LRP LVG K+P +GG+ GL G +GP + A Sbjct: 252 KGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALFGLSGFVLGPAIAA 311 Query: 337 LIAVIWKESIMAIKENKEKI 356 L W E ++E +EK+ Sbjct: 312 LFMAAW-ELFATMQEQEEKL 330 >gi|288817681|ref|YP_003432028.1| putative permease [Hydrogenobacter thermophilus TK-6] gi|288787080|dbj|BAI68827.1| putative permease [Hydrogenobacter thermophilus TK-6] gi|308751279|gb|ADO44762.1| protein of unknown function UPF0118 [Hydrogenobacter thermophilus TK-6] Length = 356 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 84/350 (24%), Positives = 165/350 (47%), Gaps = 31/350 (8%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F + L L F P+L A+I ++P++ S +S+ ++T A++ T+ V+ ++ Sbjct: 16 VFFTFLVLVILTPFLKPILWAVIFSLVAYPLHLS-LSRLLRNNTLSALMVTLLVLTFIVI 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA----SELWTKHLSHPQS 132 P L + + E+ ++ Q+ L+D+ +++ ++L T+ + Sbjct: 75 PFLIIGLVAAKQSVEITKAIIQYLQN-----HTLTDVLHSLYSLPVVNKLITEEILQRVY 129 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIF----MIIALFFFYRDGFSIS 185 + SE F K ++ + + G IF S+IF +I+ FF RDG Sbjct: 130 EYMQSEEF-KNTITSYLSKLTQKAGEIFTSMLFATGSVIFKSFVFLISFFFILRDG---- 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGVPSH 241 ++ P + + + ++ + + T L + +IG LV AY + G+ Sbjct: 185 RRFVEFFARFLPMHKEDLYEVLLTIYK-TILAVVYGSIGVALVQAVLSFIAYTVVGINYS 243 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +IT I + +P G + ++IY + +F + LWG++ + VD LRP + Sbjct: 244 LLWALITFIASFVPPFGTGFVWVPIAIYTFLNKGLFYGIFMLLWGSLVISTVDNILRPLI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIM 347 + IK+P++ FF VGG+ T G LGLF+GP++ +A+I++ I+ Sbjct: 304 MKKGIKMPYIVLFFSTVGGLLTFGFLGLFLGPIVFTTLFSLAIIYERRIL 353 >gi|270261462|ref|ZP_06189735.1| putative transport protein [Serratia odorifera 4Rx13] gi|270044946|gb|EFA18037.1| putative transport protein [Serratia odorifera 4Rx13] Length = 370 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 169/356 (47%), Gaps = 26/356 (7%) Query: 15 MIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ + L L +++ VL A+I+ P+ + + + ++++ T+ V+CL Sbjct: 13 LILFIVTAAFLDVLGPYYSSVLWAIILAVIFHPLKNKLKQYLGDRNGLVSLL-TLLVICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI----PGGMWASELWTKH-- 126 + PL + LE L K+ + +P L+++ PG WA +H Sbjct: 72 IVFTPLAIIASSLALEFNVLYEKL---QNNNTQLPAMLAEVMQHLPG--WARHFLAEHNL 126 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSIS 185 S + K LS+ LK G F+ G ++ + M+ LFF +DG + ++ Sbjct: 127 DSAAEIQKQLSDVALK--GGQFLAGSVFLIGKGTFNFAVGFGIMLYLLFFLLKDGPYLVT 184 Query: 186 QQLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L++L EH+ + K + V R+T G ++AI +G + G A+++ G+ + Sbjct: 185 LALEALPLSEHVKHHLFVKFA----AVSRATVKGTVVVAIVQGALGGLAFYITGIDGSLL 240 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G + A +++IP G+ I + +IY G ++ L + + + +VD LRP LVG Sbjct: 241 WGALMAFLSIIPAVGSAIIWVPAAIYFFATGMLWQGAFLVGFFVVIIGLVDNILRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+P +GG+ G+ G IGP++ AL W +I++ ++++E Sbjct: 301 KDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFIACW--NILSGRDSEETTDE 354 >gi|259908241|ref|YP_002648597.1| hypothetical protein EpC_15860 [Erwinia pyrifoliae Ep1/96] gi|224963863|emb|CAX55365.1| Putative membrane protein [Erwinia pyrifoliae Ep1/96] gi|283478172|emb|CAY74088.1| putative AI-2E family transporter [Erwinia pyrifoliae DSM 12163] Length = 372 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 38/373 (10%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 QG+ + +FI+ ++ L+ L +F+ +L A I+ P+ S I K LA Sbjct: 4 QGMSKGFFIFILAITTLGFLHILGPYFSAILWAAILAIIFHPLKSK-IGKHCGDRNGLAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASE 121 + T+ ++CL + +PL + +E L +++ ANQ + ++ +P Sbjct: 63 MLTLLIICLIVFIPLAVVASSLAVEFNALYNRIQ-ANQTELTTVASSVVNHLPE------ 115 Query: 122 LWTKHLSHPQSLKILSETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W +H +L + K +G+ F G + + M+ LFF Sbjct: 116 -WLRHFLAENNLTDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFF 174 Query: 177 FYRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +DG + + LD++ HLF + V R+T G ++A+ +G + Sbjct: 175 LLKDGAYLVGMALDAIPLSRFVKHHLFVKF--------AAVSRATVKGTVVVAVVQGTLG 226 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G A+W AG+ + G + A +++IP G+ I + V I+LL G + L + + Sbjct: 227 GIAFWCAGIQGSILWGSLMAFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVV 286 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIM 347 + +VD LRP LVG K+P +GG+ G+ G IGP++ AL W S Sbjct: 287 IGLVDNILRPLLVGKDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGR 346 Query: 348 AIKENKEKISSNF 360 + N ++I S+F Sbjct: 347 DHRGNTDEIDSDF 359 >gi|292488505|ref|YP_003531389.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|292899691|ref|YP_003539060.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199539|emb|CBJ46656.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553936|emb|CBA20981.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|312172649|emb|CBX80905.1| putative AI-2E family transporter [Erwinia amylovora ATCC BAA-2158] Length = 372 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 94/373 (25%), Positives = 165/373 (44%), Gaps = 38/373 (10%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 QG+ + +FI+ V+ L+ L +F+ +L A I+ P+ S I K LA Sbjct: 4 QGMSKGFFIFILAVTTLGFLHILGPYFSAILWAAILAIIFHPLKSK-IRKYCGDRNGLAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASE 121 + T+ ++CL + +PL + +E L +++ ANQ + ++ +P Sbjct: 63 MLTLLIICLIVFIPLAVVVSSLAVEFNALYNRIQ-ANQTELTTVATSVVNHLPE------ 115 Query: 122 LWTKHLSHPQSLKILSETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W +H +L + K +G+ F G + + M+ LFF Sbjct: 116 -WLRHFLAENNLNDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGVMLYLLFF 174 Query: 177 FYRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +DG + + LD++ HLF + V R+T G ++A+ +G + Sbjct: 175 LLKDGAYLVGMALDAIPLSRFVKHHLFVKF--------AAVSRATVKGTVVVAVVQGTLG 226 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G A+W AG+ + G + A +++IP G+ I + V I+LL G + L + + Sbjct: 227 GIAFWCAGIQGSMLWGSLMAFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVV 286 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIM 347 + +VD LRP LVG K+P +GG+ G+ G IGP++ AL W S Sbjct: 287 IGLVDNILRPLLVGKDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGR 346 Query: 348 AIKENKEKISSNF 360 + N ++I S+F Sbjct: 347 DHRGNTDEIDSDF 359 >gi|237747231|ref|ZP_04577711.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378582|gb|EEO28673.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 365 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRS 213 G LD+ +S M+ LFF RDG ++ ++ L P ++ + ++ K VIR+ Sbjct: 155 GQNILDFAISFGLMLYLLFFLLRDGNELAARI----RKLIPLANEQKTLLLNKFTGVIRA 210 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 T G ++AI +G + G +W G+ + + G I ++++++P G+ + + V+IY L G Sbjct: 211 TVKGNLVVAIVQGALGGLIFWFLGIEAALLWGAIMSVLSLLPAGSGVIWVPVAIYFLATG 270 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + L +G + + ++D LRP LVG ++P +GG+ GL G IGPV Sbjct: 271 AVLKGVILLAFGVLVIGLIDNFLRPLLVGKDTQMPDYLVLVSTIGGMALFGLNGFVIGPV 330 Query: 334 LMALIAVIW 342 + AL W Sbjct: 331 IAALFITAW 339 >gi|49086714|gb|AAT51373.1| PA2651 [synthetic construct] Length = 353 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 16/195 (8%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL-------GEHLFPAYWKKISRIVPK 209 G LD+ +S M+ LFF RDG + +++ HLF + Sbjct: 155 GQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVPLSQEHKHHLFAKF--------TT 206 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 VIR+T G +A +G + G +WL G+ + G + A ++++P GA + + V+ Y Sbjct: 207 VIRATVKGNIAVAATQGALGGLIFWLPGIEGALLWGTLMAFLSLLPAIGAALIWAPVAAY 266 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ GL G Sbjct: 267 FLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMALFGLNGF 326 Query: 329 FIGPVLMALIAVIWK 343 IGP++ AL W Sbjct: 327 VIGPLIAALFMASWD 341 >gi|15597847|ref|NP_251341.1| hypothetical protein PA2651 [Pseudomonas aeruginosa PAO1] gi|107102172|ref|ZP_01366090.1| hypothetical protein PaerPA_01003222 [Pseudomonas aeruginosa PACS2] gi|218891187|ref|YP_002440053.1| hypothetical protein PLES_24531 [Pseudomonas aeruginosa LESB58] gi|254235633|ref|ZP_04928956.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254241080|ref|ZP_04934402.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|9948721|gb|AAG06039.1|AE004694_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126167564|gb|EAZ53075.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126194458|gb|EAZ58521.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218771412|emb|CAW27179.1| putative exported protein [Pseudomonas aeruginosa LESB58] Length = 352 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 16/195 (8%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL-------GEHLFPAYWKKISRIVPK 209 G LD+ +S M+ LFF RDG + +++ HLF + Sbjct: 155 GQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVPLSQEHKHHLFAKF--------TT 206 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 VIR+T G +A +G + G +WL G+ + G + A ++++P GA + + V+ Y Sbjct: 207 VIRATVKGNIAVAATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALIWAPVAAY 266 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ GL G Sbjct: 267 FLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMALFGLNGF 326 Query: 329 FIGPVLMALIAVIWK 343 IGP++ AL W Sbjct: 327 VIGPLIAALFMASWD 341 >gi|258405391|ref|YP_003198133.1| hypothetical protein Dret_1267 [Desulfohalobium retbaense DSM 5692] gi|257797618|gb|ACV68555.1| protein of unknown function UPF0118 [Desulfohalobium retbaense DSM 5692] Length = 371 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 153/348 (43%), Gaps = 19/348 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ +KGF+ PV +++ P+Y + +VI S++ ++PL L Sbjct: 27 LWLVKGFWQPVFWGILLAIVFQPLYRQVLRLCHGRQRLGSVITVSSIVLGVVLPLFVLAL 86 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M E L +V L+ + I P L + L + + +ILS+T L+ Sbjct: 87 AVMQESLSLYQQV-LSGKIDIQQPVRLVEQSLPQLVDGLERIGIDFDRLREILSQTALRA 145 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 + F+ R G + + + M+ L+FF++DG I L LG+ + Sbjct: 146 S--QFLANHLFRIGQSTVQVLIQTLIMLYLLYFFFKDGQGIVNVLVRTIPLGDRRERLLF 203 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + +V R+T G +I I +G + G +W+ G+ + GV+ +++++P G+ Sbjct: 204 NRFA----EVARATIKGTLVIGIVQGGIGGGLFWILGLQGALLWGVLMVLLSILPVVGSA 259 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + I L+ G L G++ + + D LRP LVG +LP +GG Sbjct: 260 LVWGPAGIILIATGAYLKGGILLATGSVVIGLADNILRPALVGRETRLPDYLILLATLGG 319 Query: 320 VRTMGLLGLFIGPVLMALIAVIW--------KESIMAIKENKEKISSN 359 + GL G IGPV+ AL +W K + A +E ++ +S Sbjct: 320 LAVYGLAGFVIGPVVAALFLTVWEMFGLEFGKGDVAAEEEGEKGLSDQ 367 >gi|187478630|ref|YP_786654.1| membrane protein [Bordetella avium 197N] gi|115423216|emb|CAJ49747.1| putative membrane protein [Bordetella avium 197N] Length = 374 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 2/183 (1%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +S M+ LFF RDG +S +L L Y + + R V+R+T G + Sbjct: 160 QFLVSFGVMLYLLFFLLRDGPILSSRLLLA-LPLEEEYKRHLFRKFTTVVRATVKGNIAV 218 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC 280 A +G + G +W+ G+ + GV+ A ++++P GA + + V+IY L+ G I+ Sbjct: 219 AAIQGALGGVIFWVLGIQGALLWGVVMAFLSLLPAVGAGLIWLPVAIYFLVTGAIWQGVV 278 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L+G + + +VD LRP LVG KLP +GG+ GL G IGP++ AL Sbjct: 279 LILFGMLVIGMVDNVLRPVLVGKDTKLPDYVILISTLGGMALFGLNGFVIGPLIAALFVA 338 Query: 341 IWK 343 W Sbjct: 339 CWD 341 >gi|188533650|ref|YP_001907447.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] gi|188028692|emb|CAO96554.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] Length = 379 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 93/372 (25%), Positives = 158/372 (42%), Gaps = 36/372 (9%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 QGI + +FI+ + + L +F+ +L A I+ P+ S I K LA Sbjct: 4 QGISKGFFIFILAATTLGFFHILGPYFSAILWAAILAIIFHPLKSK-IRKYCRDKNGLAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASEL 122 + T+ ++CL + +PL + +E L S++ V ++ +P Sbjct: 63 LITLFIICLIVFIPLAVVASSLAIEFNALYSRIQGDQTELTTVAASVVNHLPD------- 115 Query: 123 WTKHLSHPQSLKILSETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W +H +L S K +G+ F G + + M+ LFF Sbjct: 116 WLRHFLAENNLNDASAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFL 175 Query: 178 YRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +DG + + LD++ HLF + V R+T G ++A+ +G + G Sbjct: 176 LKDGAYLVGMALDAIPLSRFVKHHLFVKF--------AAVSRATVKGTVVVAVVQGTLGG 227 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 A+W AG+ + G + A +++IP G+ I + V +Y G + L + + + Sbjct: 228 IAFWFAGIQGSILWGSLMAFLSLIPAVGSAIIWLPVVLYFFFSGAMIKGLLLTFFFVVVI 287 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMA 348 +VD LRP LVG K+P +GG+ G+ G IGP++ AL W S Sbjct: 288 GLVDNILRPLLVGKDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRD 347 Query: 349 IKENKEKISSNF 360 K N +KI S+F Sbjct: 348 HKGNTDKIDSDF 359 >gi|299533519|ref|ZP_07046896.1| hypothetical membrane protein [Comamonas testosteroni S44] gi|298718477|gb|EFI59457.1| hypothetical membrane protein [Comamonas testosteroni S44] Length = 359 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 20/320 (6%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN----- 100 P++ + + T A+ + + + I+PL + + E + ++ N Sbjct: 22 PLHRKLLMRMPNKPTLAALATLLISLVMVILPLSLIGLSLIKETAAIYDRISSGNLSAGS 81 Query: 101 ---QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 Q +P WL+ W +L L Q+ LS L+ + A G Sbjct: 82 YVEQVFNALPSWLTP-----WMEKLHLGTLEEIQTK--LSNIALQAS--KLAATKAVGLG 132 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 L + + M+ +FF RDG + ++ + L P + ++++ VIR+T G Sbjct: 133 QNTLGFVVGFGVMLYLIFFLLRDGKELVARIWA-ATPLAPEHKRELAIKFITVIRATVKG 191 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A +G + G +W+ G+ V V+ A ++++P GA + + V+IY L G + Sbjct: 192 NLAVAAAQGALGGLIFWILGIQGAVLWAVVMAFLSLLPAVGAGLVWGPVAIYFLATGAVT 251 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L +G + + +VD LRP LVG K+P +GG+ GL G +GP + A Sbjct: 252 KGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALFGLSGFVLGPAIAA 311 Query: 337 LIAVIWKESIMAIKENKEKI 356 L W E ++E +EK+ Sbjct: 312 LFMAAW-ELFATMQEQEEKL 330 >gi|82701870|ref|YP_411436.1| hypothetical protein Nmul_A0737 [Nitrosospira multiformis ATCC 25196] gi|82409935|gb|ABB74044.1| Protein of unknown function UPF0118 [Nitrosospira multiformis ATCC 25196] Length = 356 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 2/201 (0%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G F+ A G ++ +S M+ LFF RDG +++ ++ L + + + Sbjct: 142 RGSQFVATHALSLGQNAFEFLVSFGIMLYLLFFLLRDGDNLAAKIKQ-AMPLTMEHKRHL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 S VIR+T G +A +G + G ++ G+ + G + A +++IP GA + + Sbjct: 201 SSKFTTVIRATVKGNVAVAAIQGALGGVVFYFLGIQGALLWGFMMAFLSLIPAVGAGLIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+IY L G ++ T L +G + +VD LRP LVG K+P +GG+ Sbjct: 261 IPVAIYFLFTGAVWQGTVLIAFGVFVIGLVDNLLRPVLVGRDTKMPDYVVLISTLGGLVL 320 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 GL G IGPV+ AL W Sbjct: 321 FGLNGFVIGPVIAALFMSAWD 341 >gi|296120548|ref|YP_003628326.1| hypothetical protein Plim_0276 [Planctomyces limnophilus DSM 3776] gi|296012888|gb|ADG66127.1| protein of unknown function UPF0118 [Planctomyces limnophilus DSM 3776] Length = 423 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 107/194 (55%), Gaps = 4/194 (2%) Query: 153 ASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 +S +G+I +++ + + ++ L+FF DG I +L + P Y +++ KV Sbjct: 167 SSTWGIIGTLINFFIQLTVCLLGLYFFLADGPRILHGAQNL-IPIQPEYQQQVFDQFTKV 225 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 RS +G + A+G+G+ + A + G+ +G++T + AM+P GA + +SIYL Sbjct: 226 TRSVVMGTLVAAVGQGIAMSLAVGVLGIGHIFVIGMVTTVAAMVPMIGAAGVYVPMSIYL 285 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G+ F A LFL+G + + +D +R + + +++ L F ++GG+ GL G+F Sbjct: 286 ATQGHYFTAAGLFLFGFLVISSIDNVVRAYTLSSNVQMHPLLGFVSILGGLEAFGLWGIF 345 Query: 330 IGPVLMALIAVIWK 343 +GP++ +++ + K Sbjct: 346 LGPMIASVLYALAK 359 >gi|71909670|ref|YP_287257.1| hypothetical protein Daro_4061 [Dechloromonas aromatica RCB] gi|71849291|gb|AAZ48787.1| Protein of unknown function UPF0118 [Dechloromonas aromatica RCB] Length = 351 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/327 (24%), Positives = 144/327 (44%), Gaps = 9/327 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS-FISKKEESSTFLAVIATVSVMCL 73 +++ +I+ + L F VL A ++ +W Y+ + + T A + T++++ + Sbjct: 15 LVVLLIIGCITVLLPFIGAVLFAFVVWMCTWRFYAEKLLPRLGGRDTLGASLMTLALVLV 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDIPG-GMWASELWTKHLSHP 130 ++P++FL L+ + + G+P P WLS +P G W + S+ Sbjct: 75 TLLPMIFLAGSLANGTDNLIDFIKPYVEQGLPANPPAWLSALPFFGTEIDSTWHRLASNR 134 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + +F G I + L + ++ FF YRDG +IS L Sbjct: 135 EELNATVRQLVAPA-----RQFVLALGGIAANGLLQLALVLFVTFFLYRDGAAISHALYV 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + LG+ A +G V + +AGVP + LG T Sbjct: 190 GARKLGGDLGENMLDKARGTVVGVMLGIVGTAAAQGTVAMIGFLIAGVPQAMLLGFATFF 249 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++MIP G P+ + + +L G A + ++G + +D ++P L+ L L Sbjct: 250 LSMIPVGPPLIWGGAAAWLYSDGQTGWAIFMVIYGLFGISSIDNFVKPILIAYGAGLSIL 309 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMAL 337 G++GGV G +G+F+GPVL+AL Sbjct: 310 LIALGVLGGVLVFGFIGIFLGPVLLAL 336 >gi|148264677|ref|YP_001231383.1| hypothetical protein Gura_2633 [Geobacter uraniireducens Rf4] gi|146398177|gb|ABQ26810.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 21/324 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-TVSVMCLFIVPLLFL 81 S + L+ FF ++ A +I T+WP+ + K+ LAV A TV+++ +FIVP Sbjct: 27 SFWILRPFFTALVWATMIVVTTWPLMLG-VQKRLRGKRALAVTAMTVALLLVFIVP---- 81 Query: 82 FYYGMLEMKELVSKVV-----LANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKI 135 F ++ + E ++V LA P P W+ +P G + W H Sbjct: 82 FTLAIISIIERSDEIVGWSKSLATFTMPPPPEWVEQLPLAGPKLAARW--HYLTTVGQAE 139 Query: 136 LSETFL--KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LSE + ++ A GM+ + + L++I + + +G + + Sbjct: 140 LSERLAPHAKEIVSWLVTRAGNVGMMIVQFLLTVIISAV----LFANGEKAASGICLFAR 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + K IR LG+ + A+ + L+ G +AG+P+ L V+ I+ + Sbjct: 196 RLGDRNGEDAVILAAKAIRGVALGVVVTAVIQSLLAGIGLVVAGIPAPGLLTVVIFILCV 255 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + V ++L T + +WG I + +D +RP L+ LP L F Sbjct: 256 AQVGPGLVLIPVIVWLYWVDQALWGTAMIVWGII-VGTIDNFIRPVLIKKGADLPLLLIF 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPV++A+ Sbjct: 315 AGVIGGLIAFGVIGLFIGPVMLAV 338 >gi|154243797|ref|YP_001409370.1| hypothetical protein Xaut_4931 [Xanthobacter autotrophicus Py2] gi|154162919|gb|ABS70134.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 351 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/336 (22%), Positives = 146/336 (43%), Gaps = 33/336 (9%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF- 82 L+ L ++ +L A+I+ P+ A ++ ++ +C+ ++P + Sbjct: 23 LWLLSPYYGAILWAVILAILFDPLQRGLERWLGGRRNLAAALSVLACICVVVIPGTLILA 82 Query: 83 --------YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 Y + +E +LA G+ +P +W + L L L+ Sbjct: 83 ALANEAASLYTRIGTREFDPGTMLAQLQGV--------LPSFVWRA-LAALDLGDMAQLQ 133 Query: 135 ILSETFLKTNGIDFIPRFASR---FGMIFLDYCLSIIFMIIALFFFYRDGFSIS---QQL 188 +FL ++F A+R G + +S+ M+ LFF +RDG +++ ++ Sbjct: 134 TRLTSFL----LEFSQTLANRAIIIGQNTAQFVISLGVMLYLLFFLFRDGVALAASIRKA 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 LG H +K + V+++T G IA +G + G + + G+ + + GV+ Sbjct: 190 SPLGAHETDQLLEKFT----SVVKATVKGNVTIAAIQGAIGGVTFGMLGIQAALLWGVLM 245 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+++++P GA + + + YLL+ G L G + + VD LRP LVG L Sbjct: 246 AVLSLLPAVGAGLVWVPAAAYLLLTGAYLKGAILLAIGTLVISTVDNVLRPALVGKGTML 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P VGG+ +G+ G +GP+++AL W Sbjct: 306 PDYAVLISTVGGLSLIGMNGFVLGPLIVALFVAAWS 341 >gi|311693484|gb|ADP96357.1| protein belonging to uncharacterized protein family UPF0118 [marine bacterium HP15] Length = 371 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 8/220 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 G F+ R A G + L + M+ FF RDG ++ + + LG+ + Sbjct: 139 GGSQFLGRQALGVGQNTFQFFLGLALMVYLAFFLLRDGRALVELMIRALPLGDERERLLF 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K + +V R+T G +IAI +G + G +W+ G+ + GV+ AI++++P GA Sbjct: 199 AKFA----EVTRATVKGNLLIAIIQGALGGLIFWILGISGALLWGVVMAIVSLLPAVGAA 254 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + +IYL G++ A L +G + + + D LRP LVG KLP +GG Sbjct: 255 LVWVPAAIYLAAVGDVVEAVVLTAFGVVVIGLADNLLRPVLVGRDTKLPDYIVLLSTLGG 314 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+ G +GP++ AL W I E + +++ Sbjct: 315 IVMFGINGFVMGPLVAALFMAFWGIFIREFSEEAHRPAAS 354 >gi|218506533|ref|ZP_03504411.1| putative permease protein [Rhizobium etli Brasil 5] Length = 81 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/52 (78%), Positives = 44/52 (84%) Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 2 LVGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARN 53 >gi|91974818|ref|YP_567477.1| hypothetical protein RPD_0338 [Rhodopseudomonas palustris BisB5] gi|91681274|gb|ABE37576.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 365 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/367 (24%), Positives = 170/367 (46%), Gaps = 46/367 (12%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSF-----ISKKEESSTFLAV 64 R+ I+ +++ S+ F L ++ VL ++I P+Y + + T +A+ Sbjct: 7 RFFILLLLVASIGFGWILLPLYSAVLWGVVIAILFAPLYRQLNRAFGFRRNLAALTTVAI 66 Query: 65 IATVSVMCLFIV---------PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 I T+ ++ + ++ + G L+M + + K VLA P W+S + Sbjct: 67 IVTMVILPISLIGAALAQEARAMFLRIESGNLDMLQYL-KQVLAEP-----PAWISGV-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 +LS Q + LS ++ G ++ A G ++ +++ M+ LF Sbjct: 119 ---LERFSIGNLSDLQ--ERLSAVLMR--GSQYLAGQAIGIGQGTVEIVINLGVMVYLLF 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSA 232 F RDG ++ ++ P ++ S+++ K VIR+T G +IA+ +G + G Sbjct: 172 FLLRDGDLLAARI----RRAVPLSVEQESQLLRKFTVVIRATVKGNMLIALIQGALGGVM 227 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +++ GV + GV+ A ++++P GA + + V++YLL G+I+ L +G + + Sbjct: 228 FYILGVNGALLWGVVMAFLSLLPAVGAGLVWLPVALYLLGTGSIWQGVALIAFGTMVIGT 287 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW------KES 345 VD LRP LVG ++P +GG++ GL G IGPV+ A+ W +E+ Sbjct: 288 VDNVLRPVLVGKDTRMPDYVVLISTLGGIQVFGLNGFVIGPVIAAIFIAAWDIYSASREA 347 Query: 346 IMAIKEN 352 I E Sbjct: 348 AAGIGET 354 >gi|225873136|ref|YP_002754595.1| hypothetical protein ACP_1510 [Acidobacterium capsulatum ATCC 51196] gi|225791352|gb|ACO31442.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 353 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 25/288 (8%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 LF+ G++ L+++++ Q+ + + LS+ G + + HPQ +L Sbjct: 68 LFIVAIGIILPGALLARIL--GQYAVAIGAALSN---GAVEAAIRQALNHHPQLAALLQH 122 Query: 139 --TFLK-TNGIDFIPRFASRFGMIFLDYCLS----IIFMIIALFFFYRDGFSISQQLDSL 191 FL N + F S + L ++ I+ M+ LFF YRD + + L S+ Sbjct: 123 GSRFLTWNNAAERAGTFLSAHAINLLSNSIAALTQIVVMLFLLFFLYRDSRAAVRALYSV 182 Query: 192 GEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P K+ +V + IR+TFLG +A +G+V G + + V LG++T Sbjct: 183 ----LPMQQKEALMLVTSMEGTIRATFLGHLAVAAIQGIVAGIVFAILRVTGAAPLGMLT 238 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+ AM+P GA + + V++YL + G + A L + GA+ + +D L P LVG ++ Sbjct: 239 AVAAMVPSFGAYVVWLPVAVYLGLAGRLIPAILLIVIGALIISTLDNLLYPLLVGAQLRQ 298 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVL----MALIAVIWKESIMAIKE 351 L+GG+ G+ GL +GPVL MAL+ IW E A E Sbjct: 299 HPAIILLALLGGIWMFGIAGLVLGPVLFSVAMALLR-IWHERSQAGVE 345 >gi|116050638|ref|YP_790543.1| hypothetical protein PA14_29820 [Pseudomonas aeruginosa UCBPP-PA14] gi|296388888|ref|ZP_06878363.1| hypothetical protein PaerPAb_12095 [Pseudomonas aeruginosa PAb1] gi|313107690|ref|ZP_07793872.1| putative exported protein [Pseudomonas aeruginosa 39016] gi|115585859|gb|ABJ11874.1| putative exported protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310880374|gb|EFQ38968.1| putative exported protein [Pseudomonas aeruginosa 39016] Length = 352 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 16/195 (8%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL-------GEHLFPAYWKKISRIVPK 209 G LD+ +S M+ LFF RDG + +++ HLF + Sbjct: 155 GQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVPLSQEHKHHLFAKF--------TT 206 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 VIR+T G +A +G + G +W+ G+ + G + A ++++P GA + + V+ Y Sbjct: 207 VIRATVKGNIAVAATQGALGGLIFWVLGIEGALLWGTLMAFLSLLPAIGAALIWAPVAAY 266 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ GL G Sbjct: 267 FLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMALFGLNGF 326 Query: 329 FIGPVLMALIAVIWK 343 IGP++ AL W Sbjct: 327 VIGPLIAALFMASWD 341 >gi|326386812|ref|ZP_08208432.1| hypothetical protein Y88_2706 [Novosphingobium nitrogenifigens DSM 19370] gi|326208731|gb|EGD59528.1| hypothetical protein Y88_2706 [Novosphingobium nitrogenifigens DSM 19370] Length = 386 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 16/252 (6%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 RWLSD+ L L+ P++L+ L G+ I G L L++ Sbjct: 146 RWLSDL-------GLGDLGLADPETLRQRITRGL-AGGLQAIAPQILNVGQGALGLFLTL 197 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIG 224 M+ FF RDG I++++ E P + R++ + V+R+T G IA+ Sbjct: 198 GVMLYLTFFLLRDGRGIAERI----ERALPLPALQRRRLLSEFVSVVRATVKGSMTIAVV 253 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 +G + G +W+ G+P + G+ + ++ P G + SIYLL G ++ LFL Sbjct: 254 QGGIGGFTFWMLGLPGALLWGLAMGVFSLFPAVGTGFIWVPASIYLLATGAVWKGVILFL 313 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + +D +RP LVG ++P +GG G G +GPV+ AL +W Sbjct: 314 CGFFVISTIDNVIRPILVGRDTQMPDYIVLISTLGGFNLFGFNGFVLGPVIAALFLSVWD 373 Query: 344 ESIMAIKENKEK 355 +++ E Sbjct: 374 IFGRGVQDEAEN 385 >gi|146307480|ref|YP_001187945.1| hypothetical protein Pmen_2457 [Pseudomonas mendocina ymp] gi|145575681|gb|ABP85213.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 362 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 7/315 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F++ + A ++ F SWP+ + + A I T + L PL++L + Sbjct: 22 WVLAPFWSALFWAAVLAFASWPLMRLLTQLLKGRLSLAAGILTCGWVILVAGPLIWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +K+ + + G+P P WL+ +P G + LW + +L Sbjct: 82 LADHIKDANALIKDLQVEGLPPPPAWLTGLPLVGERLAALWMTIDQQGAAFFASLRPYLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A G + ++ +FFFYRDG ++ + L E L Sbjct: 142 QVGNWLLARSAQLGGGMLELGLSLVL-----VFFFYRDGPRLAVFVHGLLERLIGERADH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A +GL+ +W+AGVP + LG++T +++++P G P+ + Sbjct: 197 YLELVAGTVQRVVNGVIGTAAAQGLLALIGFWIAGVPGAIVLGILTFVLSLVPMGPPLVW 256 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +L+ +G+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 257 IPATAWLVWQGDYGFALFLGVWGMFVISGVDNILKPYLISRGGNLPLVVVLLGVFGGLLA 316 Query: 323 MGLLGLFIGPVLMAL 337 G +GLF+GP L+A+ Sbjct: 317 FGFMGLFLGPTLLAV 331 >gi|218516479|ref|ZP_03513319.1| putative permease protein [Rhizobium etli 8C-3] Length = 161 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 1/125 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T A IA + ++ Sbjct: 34 RWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTIAATIAIIMIVT 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++P+ F Y E++ ++ + AN+ G P W++ +P G + ELWTK++ P Sbjct: 94 FLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLDELWTKYIGSPG 153 Query: 132 SLKIL 136 +L L Sbjct: 154 ALGEL 158 >gi|152988070|ref|YP_001347913.1| hypothetical protein PSPA7_2549 [Pseudomonas aeruginosa PA7] gi|150963228|gb|ABR85253.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 352 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 16/190 (8%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSL-------GEHLFPAYWKKISRIVPKVIRST 214 D+ +S M+ LFF RDG + +++ HLF + VIR+T Sbjct: 160 DFVISFGIMLYLLFFLLRDGRVLGRRIKQAVPLSQEHKHHLFAKF--------TTVIRAT 211 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKG 273 G +A +G + G +WL G+ + G + A ++++P GA + + V+ Y L+ G Sbjct: 212 VKGNIAVAATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALIWAPVAAYFLLTG 271 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 I+ L L+ + + +VD LRP LVG K+P +GG+ GL G IGP+ Sbjct: 272 AIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMALFGLNGFVIGPL 331 Query: 334 LMALIAVIWK 343 + AL W Sbjct: 332 IAALFMASWD 341 >gi|158424265|ref|YP_001525557.1| hypothetical protein AZC_2641 [Azorhizobium caulinodans ORS 571] gi|158331154|dbj|BAF88639.1| putative membrane protein [Azorhizobium caulinodans ORS 571] Length = 388 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 8/183 (4%) Query: 165 LSIIFMIIALFFFYRDGFSIS---QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 +S+ M+ LFF +RDG S++ ++ L H + + K S V+++T G II Sbjct: 200 VSLGVMVYVLFFLFRDGASLALAIRRTSPLSPHHTESLFAKFS----DVLKATVKGNVII 255 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC 280 A+ +GL+ G A+W G+ + + GV A+++++P GA + + + YL++ G Sbjct: 256 ALVQGLIGGLAFWGLGIGAPLLWGVSMAVLSLVPAVGAALVWGPTAAYLMLSGQYLKGAI 315 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L G + ++D LRP LVG +LP +GG+ G+ G IGP++ A+ Sbjct: 316 LLGIGIFVISMIDNLLRPPLVGKGTRLPDYMVLVSTLGGISLFGVNGFVIGPLIAAMFVA 375 Query: 341 IWK 343 IW Sbjct: 376 IWS 378 >gi|283833290|ref|ZP_06353031.1| putative membrane protein [Citrobacter youngae ATCC 29220] gi|291070927|gb|EFE09036.1| putative membrane protein [Citrobacter youngae ATCC 29220] Length = 369 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 31/352 (8%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 G+ + +FI+ V + L +F+ +L A I+ P+ + S E + LA Sbjct: 4 NGLTKGFFIFILAVVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNG-LAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASE 121 + T++++CL + +PL+ + +E+ + +K+ N P V LS +PG WA Sbjct: 63 LITIAIICLIVFIPLMVILSSLAIELNVVYTKLQ-QNDTQFPEVVTSILSYLPG--WARG 119 Query: 122 LWTKH-LSHPQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +H L + + K LS L+ G ++ A G + +S M+ LFF + Sbjct: 120 FLAEHNLDNAAEIQKKLSNIALQ--GGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLK 177 Query: 180 DG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 DG + + Q LDSL +HLF + V R+T G ++A+ +G++ G A Sbjct: 178 DGPYLVRQILDSLPLSDFAKQHLFAKF--------VGVTRATVKGTAVVALVQGILGGIA 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + + + V G + A ++++P G+ I + +I+L ++ + + I + + Sbjct: 230 FAIVDIDGSVLWGALMAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VD LRP LVG K+P +GG+ G+ G IGP++ AL W Sbjct: 290 VDNILRPLLVGKDTKMPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWN 341 >gi|157370292|ref|YP_001478281.1| hypothetical protein Spro_2050 [Serratia proteamaculans 568] gi|157322056|gb|ABV41153.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 373 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 166/356 (46%), Gaps = 19/356 (5%) Query: 15 MIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ + L L +++ VL A+I+ P+ E + ++++ TV+V+CL Sbjct: 13 LILFIVTAAFLDVLGPYYSSVLWAIILAVIFHPVKQKLKQYLGERNGLVSLL-TVAVICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKH-LSHP 130 + PL + +E+ + +K+ N Q + + L +PG WA T+H L + Sbjct: 72 IVFTPLAIIASSLAIELNVVYTKLQGNNAQFPVVLADTLRVLPG--WARHFLTEHNLDNA 129 Query: 131 QSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG---FSISQ 186 + K LS+ L+ G ++ G ++ + M+ LFF +DG +++ Sbjct: 130 AEIQKKLSQVALQ--GGQYLAGSVFLIGKGTFNFAVGFGVMLYLLFFLLKDGPYLVNLTL 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q L EH+ + K + V R+T G ++A +G + G A+++ G+ + Sbjct: 188 QALPLSEHVKHHLFVKFA----AVSRATVKGTVVVAAVQGALGGLAFYITGIEGSLLWAA 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A +++IP G+ I + +IY G ++ L + + + +VD LRP LVG Sbjct: 244 LMAFLSIIPAVGSAIIWVPAAIYFFATGMLWKGLFLVGFFVVIIGLVDNILRPLLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 K+P +GG+ G+ G IGP++ AL W S E ++I +F Sbjct: 304 KMPDYLILISTLGGMEIYGINGFVIGPLIAALFIACWNILSGRDSAETTDEIDEDF 359 >gi|310815720|ref|YP_003963684.1| hypothetical protein EIO_1241 [Ketogulonicigenium vulgare Y25] gi|308754455|gb|ADO42384.1| putative membrane protein [Ketogulonicigenium vulgare Y25] Length = 374 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 75/336 (22%), Positives = 148/336 (44%), Gaps = 15/336 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 M++ + + ++ + F+ VL A+I+ P++ + + A +T++ +C+ Sbjct: 14 MLIIVTIAFVWLMLPFYGAVLWAIILAILFNPLHRRLVRGLGGRRSLAAAFSTLACICIV 73 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM---WASELWTKHLSHPQ 131 ++P + E L ++V + I + L + GM L +LS Sbjct: 74 VIPGSMVLAALAREAGSLYARVSAPDFDAISI---LERVHAGMPSYLVEALSAFNLSEFD 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS---QQL 188 ++ FL + + A G + + M+ LFF +RDG ++ ++ Sbjct: 131 QIQTRLTGFLG-DAAQTVATGALNIGQSTAQLVIGLGVMLYVLFFMFRDGSQLAIIIRRA 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L ++ +K + +V +R G IIA+ +G + G + L G+ + GV+ Sbjct: 190 SPLTDYQTEHVLRKFTTVVKYTVR----GNVIIAVIQGAIGGITFLLLGIEAAFLWGVLM 245 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+++++P GA + ++ + YL + G + L G + + +D LRP LVG KL Sbjct: 246 AVLSLLPAVGAFLVWSPAAAYLFLSGQVIQGFILVAVGVVIISTIDNILRPPLVGQGTKL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ G+ G IGP++ AL +W Sbjct: 306 PDYMVLVSTLGGLALFGVNGFVIGPLIAALFVALWS 341 >gi|50119081|ref|YP_048248.1| hypothetical protein ECA0120 [Pectobacterium atrosepticum SCRI1043] gi|49609607|emb|CAG73040.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 438 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 83/365 (22%), Positives = 174/365 (47%), Gaps = 19/365 (5%) Query: 3 ETMLNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 E ++N +G+ + + I+ + +V+L F L +++ +L A ++ P+ S K + Sbjct: 37 EIVVNIKGLTKGFFILILFVVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDR 96 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGM 117 + +++ + + + +PL + ++E+ + +++ +N Q + + +P Sbjct: 97 NGLASLLTVLIIFLIVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELFQHLP--K 154 Query: 118 WASELWTKHLSHPQSLKILSE-TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 WA T+H + + KI E + + G ++ G + + M+ LFF Sbjct: 155 WARHFLTEH-NLDNAAKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFF 213 Query: 177 FYRDG-FSISQQLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +DG + ++ L+SL H+ K + V R+T G ++AI +G + G A+ Sbjct: 214 LLKDGSYLVNLILESLPLSTHVKHHLLVKFA----AVSRATVKGTVVVAIVQGTLGGIAF 269 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +AG+ + G + A +++IP G+ I + +I+L ++ A + + + + +V Sbjct: 270 SIAGIEGSLLWGSLMAFLSLIPAVGSAIIWVPAAIFLFATDMLWQAIFIVAFFVLVIGVV 329 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D LRP LVG K+P +GG+ G+ G IGP++ AL W +I++ ++N Sbjct: 330 DNILRPLLVGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACW--NILSGRDN 387 Query: 353 KEKIS 357 +E I Sbjct: 388 QENIE 392 >gi|90580617|ref|ZP_01236422.1| putative permease [Vibrio angustum S14] gi|90438275|gb|EAS63461.1| putative permease [Photobacterium angustum S14] Length = 361 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 50/374 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ + V+ + ++ + P++ A II P++ ++ + A+++ Sbjct: 11 HWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSCF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++PLL +F ++ VSK +W++ GG EL+ + Sbjct: 71 VLTVIIVIPLLVVFS-SIVHQGTTVSKESY---------QWITS--GG--PKELF----A 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRF--------ASRFGMIFLDYCLSII-----------F 169 HP + K+L + DF P+ AS+ G ++ I+ Sbjct: 113 HPYAQKVLFYIDKYSPFHDFDPQVIIQKIATTASQVGSQAINISARILGDATSILVNFMM 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 M+ LFF RD + ++ + H+ P + I V +V +S LG + A+ +G Sbjct: 173 MLFVLFFLLRD----NDKMIAAIRHVIPLSRSQEDAIMEEVEQVAKSAVLGSFLTAVAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 L G A WL G P + G + A ++IP G + + S+YLL+ G A L WG Sbjct: 229 LAGGFAMWLCGFPG-LFWGSMMAFASLIPVVGTALIWLPASLYLLLVGQWEWALFLAGWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + +D +RP L+ G + L FF ++GG++ GL+G+ GP++ + V++K Sbjct: 288 VLVVGSIDNVVRPLLMQGSSSMNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMY 347 Query: 346 IMAIKENKEKISSN 359 + K+ E+ SN Sbjct: 348 EVEFKDFLEQQDSN 361 >gi|73542361|ref|YP_296881.1| hypothetical protein Reut_A2676 [Ralstonia eutropha JMP134] gi|72119774|gb|AAZ62037.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 388 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 82/343 (23%), Positives = 144/343 (41%), Gaps = 45/343 (13%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL- 81 SL L F +L I+ F+SW Y+ + A+I V + + P ++ Sbjct: 23 SLLVLAPFTTALLWGAILAFSSWYPYTVLARWLGNRRSLAALICVVLAAVIVLGPFVYAG 82 Query: 82 --FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP--GGMWASELWTKHLSHPQSLKIL 136 F + ++ LV + + GIP +P WLS +P GG +L I Sbjct: 83 ASFSAHIDQLSALVDRYI---DQGIPQLPDWLSSLPYVGG---------YLQTSWERLIH 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDG-------- 181 +++ + N + + + G L LS+ II FFFY G Sbjct: 131 ADSEMVAN----VRKLIAPVGHALLGAGLSVGAGLGQLALSIILAFFFYTGGEYAIDWLR 186 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +HL + +V V+ + F+ + IG W+AGVP+ Sbjct: 187 AGMRRIAGERADHLLALAGSTVKGVVYGVLGTAFIQAVLQGIG--------LWIAGVPAA 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG +T +++IP G P+ + +++L G A L +WG + + D ++P L+ Sbjct: 239 AILGFVTFFLSVIPVGPPLVWLPAALWLYHGGETGWAIFLVVWGVAVVGMADNVVKPLLI 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +P + G++GG G LG+FIGP L+A+ + ++ Sbjct: 299 SKGTGMPLIWIMMGVLGGALAFGFLGVFIGPTLLAVAYALLRD 341 >gi|221067315|ref|ZP_03543420.1| protein of unknown function UPF0118 [Comamonas testosteroni KF-1] gi|220712338|gb|EED67706.1| protein of unknown function UPF0118 [Comamonas testosteroni KF-1] Length = 391 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 19/307 (6%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN----- 100 P++ + + T A+ + + + I+PL + + E + +V N Sbjct: 45 PLHRKLLMRMPNRPTLAALATLLISLVMVILPLSLIGLSLIKETSAIYDQVSSGNLSAGS 104 Query: 101 ---QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 Q +P WL+ W +L L Q+ LS L+ + A G Sbjct: 105 YVEQIFNALPSWLTP-----WMEKLHLGTLEEIQA--KLSNIALQAS--KLAATKAVGLG 155 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 L + + M+ +FF RDG + ++ + L P + ++++ VIR+T G Sbjct: 156 QNTLGFVVGFGVMLYLIFFLLRDGKELVARIWA-ATPLAPEHKRELATKFITVIRATVKG 214 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A +G + G +W+ G+ V V+ A ++++P GA + + V+IY L G I Sbjct: 215 NLAVAAAQGALGGLIFWILGIQGAVLWAVVMAFLSLLPAVGAGLVWGPVAIYFLATGAIT 274 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L +G + + +VD LRP LVG K+P +GG+ GL G +GP + A Sbjct: 275 KGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALFGLSGFVLGPAIAA 334 Query: 337 LIAVIWK 343 L W+ Sbjct: 335 LFMAAWE 341 >gi|332188283|ref|ZP_08390010.1| hypothetical protein SUS17_3412 [Sphingomonas sp. S17] gi|332011679|gb|EGI53757.1| hypothetical protein SUS17_3412 [Sphingomonas sp. S17] Length = 359 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 26/196 (13%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKI-------SRIVP---KVIRSTFLGMTIIAIG 224 FF RDG E L PA+ + + +R+V V+R+T G I+ + Sbjct: 175 FFLIRDG-----------ERLGPAFVRALPLEQGVAARLVETFVAVVRATIKGSVIVGLV 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 +G + +W+ G+P+ + GV+ AI A++P G I + V++YLL G I+ + + Sbjct: 224 QGALGAITFWIVGLPAALLWGVLMAIAALLPAIGPAIIWGPVAVYLLATGAIWQGAVVIV 283 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + + + D LRP LVG LP +GG+ +GL G+ +GPV+ AL W+ Sbjct: 284 SGVLVIGLADNILRPILVGRDTGLPDWIVLLTTLGGIEVLGLSGIVVGPVVAALFLAGWR 343 Query: 344 ----ESIMAIKENKEK 355 E +A+ E + + Sbjct: 344 ILSEERGVALPEAETE 359 >gi|225848452|ref|YP_002728615.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644073|gb|ACN99123.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 354 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 89/350 (25%), Positives = 166/350 (47%), Gaps = 48/350 (13%) Query: 16 IMFIILVSLYFLKGF--FAPVLSALIIGFTSWPIYSSF---ISKKEESSTFLAVIATVSV 70 I FII L+ G+ F+P + +++ I+ F I K +S ++I+T+++ Sbjct: 11 IFFIISFLLFLFLGYVIFSPFVGLILVSLLFVVIFYPFHLKIKSKVKSDILSSLISTLTI 70 Query: 71 MCLFIVPL-LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++PL L +F+ KE++ L +Q+ I P + + +L + + Sbjct: 71 LTFILIPLSLIVFFLA----KEIIDLYPLVSQY-ISNPNY--------FVEKLKSVPYLY 117 Query: 130 PQSLKILSETFLKTNG------IDFIPRFASRFGMI---FLD----YCLSIIFMIIALFF 176 LK+ +E F N I+++ FAS F I FL + + I +I+ +FF Sbjct: 118 NLYLKVQNEIFNNVNSNLHETFINYLKGFASTFFDIAKGFLTNLILFSIGIFILILNIFF 177 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY--- 233 ++DG ++L L + P ++ + ++++L + + +G V + Sbjct: 178 LFKDG----EKLYKLVHSVIPLDKEEKDYL----FKNSYLAVQAVILGSVFVAVAQAVAT 229 Query: 234 ----WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 +AGV + + IT + A IP GGA + + V+IYL + FL+G Sbjct: 230 LIGLLVAGVDYAIIIAFITFLAAFIPFGGASLVWVPVAIYLFATKSFIAGLLFFLYGTFV 289 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + VD +RP +VG I + + FF ++GG++ G LG+FI PV++A+I Sbjct: 290 ISTVDNIVRPIVVGSKIDIHPMILFFAILGGLKAFGFLGIFIAPVIVAVI 339 >gi|330984387|gb|EGH82490.1| hypothetical protein PLA107_05089 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 351 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 161/348 (46%), Gaps = 28/348 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + P GI +I+ ++ +LY L F + +I F +WP + E ++ Sbjct: 1 MISQLEKPIGIA--LIVGVLFAALYVLSPFAITLAWGALIAFATWPA----VKWIERTTG 54 Query: 61 FLAVIATVSVMCLFIV---PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG- 115 L V A+ +F V PL+ L + VV ++ +P P W++ +P Sbjct: 55 RLWVGASAVCFMMFAVVLGPLVALSVSFAGDATVFTHWVVEMSKSTLPESPGWVTGLPWV 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 G + W+ + + + +L + I I + G + ++ +S++F F Sbjct: 115 GSYLDHQWSLWHEKGPNWFLDVKPYLSSL-IHVIIGKSGVLGSVLVEIAISLLFA----F 169 Query: 176 FFYRDGFSIS----QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 +F+ +G I+ + L +L YW+ + VI G+ +I + ++ Sbjct: 170 WFHLEGEKITNLAQKALHALIGQASSRYWEIARNTISGVIN----GVIGTSIAQAVLALI 225 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +W+AGVP + LGV T +++IP G P+ + +L +G A L +W + + Sbjct: 226 GFWIAGVPGALLLGVGTFFLSLIPMGPPLLWVPAIGWLFYQGETGYAIFLAIWCVVVVSG 285 Query: 292 VDKTLRPFLV--GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VD L+P L+ GG + LP + G++GG+ T+G LGLFIGPV +AL Sbjct: 286 VDHILKPILISRGGVLPLPIV--LIGIMGGMLTLGFLGLFIGPVCLAL 331 >gi|194288785|ref|YP_002004692.1| hypothetical protein RALTA_A0641 [Cupriavidus taiwanensis LMG 19424] gi|193222620|emb|CAQ68623.1| conserved hypothetical protein, DUF20; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 394 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 79/349 (22%), Positives = 147/349 (42%), Gaps = 35/349 (10%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL L F +L I+ F+SW Y+ A+I + + + P ++ Sbjct: 23 SLLVLAPFTTALLWGAILAFSSWHPYTVLSRWLGNRRGLAALICVLLATVIVLGPFVYAG 82 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + +L + V + G+P +P WLS +P +L + I +++ + Sbjct: 83 ASFSAHLDDLAALVDRYMEQGLPQLPLWLSSLP-------YVGSYLQNSWDSVINADSEM 135 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDG-FSIS-------Q 186 N + + + G + L LSI II FFFY G F+I+ + Sbjct: 136 VAN----LRKLIAPVGHVLLGAGLSIGAGLGQLALSIILAFFFYTGGEFAIAWLRAGMRR 191 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +HL + +V V+ + F+ + IG W+AGVP LG Sbjct: 192 IAGERADHLLELAGSTVKGVVYGVLGTAFIQAVLAGIG--------LWIAGVPGAAILGF 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T ++++P G P+ + +++L G A L +WG + + D ++P L+ Sbjct: 244 VTFFLSVVPVGPPLVWLPAALWLYHTGATGWAIFLVVWGVGVVSMADNIVKPLLISKGTG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P + G++GG G LG+FIGP L+A+ + ++ + + ++ Sbjct: 304 MPLIWIMLGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQGELQR 352 >gi|298291255|ref|YP_003693194.1| hypothetical protein Snov_1260 [Starkeya novella DSM 506] gi|296927766|gb|ADH88575.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 370 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 147/327 (44%), Gaps = 15/327 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ L ++ +L A+I+ P+ ++ A ++ ++ +C+ ++P + Sbjct: 43 LWLLLPYYGAILWAVILAILFDPLRRRLEARLGGCRNLAAALSVLACICIVVIPGAAILA 102 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM---WASELWTKHLSHPQSLKILSETF 140 E L +++ N + L +I G + T +L ++ +F Sbjct: 103 SLAQEAASLYNRI---NTREFDLATLLGEIQGALPPFVEKAFATLNLGDFVEIRTRLTSF 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L + R A G + +S+ M+ LFF +RDG + L +L P Sbjct: 160 LMYASQEVATR-ALSIGQNTAQFFVSLGVMLYLLFFLFRDG----RLLANLIRKASPLSG 214 Query: 201 KKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 + I+ K V+ +T G IIA +G + G A+W+ G+ + + GV+ A ++++P Sbjct: 215 RHTDHILEKFSSVVAATVKGNIIIAAIQGGIGGIAFWMLGIQAALLWGVLMAFLSLLPAI 274 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 GA + + V++Y L+ + F LF G + + VD LRP LVG +LP Sbjct: 275 GAALVWVPVAVYFLLAADYFRGVVLFAVGVLVISTVDNLLRPPLVGRGTRLPDYVVLIST 334 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWK 343 VGG+ +G+ G IGP++ AL +W Sbjct: 335 VGGLSVIGMNGFVIGPLIAALFIAVWS 361 >gi|260564563|ref|ZP_05835048.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989779|ref|ZP_06102336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|260152206|gb|EEW87299.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|263000448|gb|EEZ13138.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 354 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F + E Sbjct: 28 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 87 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLKTN 144 L ++ + + GI + R ++ +P + E W K + +S ++ + Sbjct: 88 TSLYQRLS-SREFGINGYIARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQGS 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 144 QL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQFL 200 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + +T Sbjct: 201 EKFTAVIRATVKGNIIIAIIQGMIGGITFWLLGIEAALLWGVIMTFCSMLPAVGAALVWT 260 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ + Sbjct: 261 PAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLI 320 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGP++ A+ W S++A +E K++ Sbjct: 321 GINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 349 >gi|237809884|ref|YP_002894324.1| hypothetical protein Tola_3150 [Tolumonas auensis DSM 9187] gi|237502145|gb|ACQ94738.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 356 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 162/337 (48%), Gaps = 24/337 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI-VPLLFLFYYGMLE 88 F L A+I+ +W ++ ++S + +A + V+++ LFI VPL+F +E Sbjct: 32 FLVATLWAIILVSATWDQFA-WLSARFGGRDGVAAMLVVTILMLFIMVPLVF----ASVE 86 Query: 89 MKELVSKVVLANQHGI------PVPRWLSDIP-GGMWASELWTKHLSHPQ-SLKILSE-T 139 + ++ + QH I +P+WL D+P G W W L Q +++L++ Sbjct: 87 FAQQLTVLARDLQHQIESGVWPALPQWLLDVPYAGEWLQAEW---LGLQQLDMQVLNQLK 143 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L T + A FG L +S++ + Y G +I + + + + P Sbjct: 144 GLVTPLAKIMLSMAGSFGAGMLMLLISLLIAGV----LYAHGETIHRWVLAFSHKVAPKE 199 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + IR G AI +G Y LAG+P ++LG+ T+++++IPGG P Sbjct: 200 GIRLLHVAHTTIRGVVNGFIGAAIAQGAFAWFGYALAGIPHALSLGLATSLISVIPGG-P 258 Query: 260 ISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + +I +L +G++ A + +W + +D ++ ++G LP + FG+ G Sbjct: 259 MLLSIPAIGWLYQQGSVGWAIFVAVWILFAVGSIDNVVKSLVIGRSSPLPIVLILFGVAG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + GLLG+F+GP+L+AL+ + K + A + + Sbjct: 319 GAISFGLLGVFLGPILLALVYALLKNWVNADEAADQT 355 >gi|17989151|ref|NP_541784.1| putative transmembrane protein [Brucella melitensis bv. 1 str. 16M] gi|256043359|ref|ZP_05446292.1| hypothetical protein Bmelb1R_02664 [Brucella melitensis bv. 1 str. Rev.1] gi|17985002|gb|AAL54048.1| putative transmembrane protein [Brucella melitensis bv. 1 str. 16M] Length = 352 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F + E Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLKTN 144 L ++ + + GI + R ++ +P + E W K + +S ++ + Sbjct: 86 TSLYQRLS-SREFGINGYIARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQGS 141 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 142 QL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQFL 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + +T Sbjct: 199 EKFTAVIRATVKGNIIIAIIQGMIGGITFWLLGIEAALLWGVIMTFCSMLPAVGAALVWT 258 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ + Sbjct: 259 PAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLI 318 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGP++ A+ W S++A +E K++ Sbjct: 319 GINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|237731362|ref|ZP_04561843.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906901|gb|EEH92819.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 369 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 89/352 (25%), Positives = 162/352 (46%), Gaps = 31/352 (8%) Query: 9 QGIMRWMIMFII-LVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 G+ + +FI+ LV+ F L +F+ +L A I+ P+ + S E + LA Sbjct: 4 NGLTKGFFIFILALVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNG-LAS 62 Query: 65 IATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASE 121 + T+ ++CL + +PL+ + +E+ + +K+ Q+ P ++ I + WA Sbjct: 63 LITIVIICLIVFIPLMVILSSLAIELNVVYTKL---QQNDTQFPEVVTSILSFLPDWARG 119 Query: 122 LWTKHLSHP--QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +H Q K LS+ L+ G ++ A G + +S M+ LFF + Sbjct: 120 FLAEHNLDDIAQIQKKLSDVVLQ--GGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLK 177 Query: 180 DG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 DG + + Q LDSL +HLF + V R+T G ++A+ +G++ G A Sbjct: 178 DGPYLVRQILDSLPLSDFAKQHLFAKF--------VGVTRATVKGTAVVALVQGILGGIA 229 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + + + V G + A ++++P G+ I + +I+L ++ + + I + + Sbjct: 230 FAIVDIDGSVLWGALMAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGL 289 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VD LRP LVG K+P +GG+ G+ G IGP++ AL W Sbjct: 290 VDNILRPLLVGKDTKMPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWN 341 >gi|317484069|ref|ZP_07943001.1| hypothetical protein HMPREF0179_00352 [Bilophila wadsworthia 3_1_6] gi|316924675|gb|EFV45829.1| hypothetical protein HMPREF0179_00352 [Bilophila wadsworthia 3_1_6] Length = 391 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 8/200 (4%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKIS 204 F+ R G L + ++ ++ FF DG I + L G+H ++K + Sbjct: 146 FLARNTVTLGENTLGFLTNLALVLYIAFFLLMDGTKIQELLIKALPFGDHREKLLFRKFA 205 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 +V R+T G ++A +G + G +WL + + + GV+ +A+IP GA + + Sbjct: 206 ----EVTRATVKGSLLVAAAQGALGGVIFWLLDIHAALLWGVVMTALALIPVVGAALVWG 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V++YLL+ G+ ++ L +G+ + + D LRP LVG KLP +GG Sbjct: 262 PVAVYLLLTGDYWDGGILLAYGSTVIGLADNILRPLLVGRDTKLPDFLVLLSTLGGFVFF 321 Query: 324 GLLGLFIGPVLMALIAVIWK 343 G+ G GP L L +W+ Sbjct: 322 GMDGFVTGPTLAVLFVTVWQ 341 >gi|189022920|ref|YP_001932661.1| hypothetical protein BAbS19_II07200 [Brucella abortus S19] gi|189021494|gb|ACD74215.1| hypothetical protein BAbS19_II07200 [Brucella abortus S19] Length = 361 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F + E Sbjct: 35 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 94 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLKTN 144 L ++ + + GI + R ++ +P + E W K + +S ++ + Sbjct: 95 TSLYQRLS-SREFGINGYIARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQGS 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 151 QL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQFL 207 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + +T Sbjct: 208 EKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALVWT 267 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ + Sbjct: 268 PAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLI 327 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGP++ A+ W S++A +E K++ Sbjct: 328 GINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 356 >gi|85860942|ref|YP_463144.1| permease [Syntrophus aciditrophicus SB] gi|85724033|gb|ABC78976.1| predicted permease [Syntrophus aciditrophicus SB] Length = 350 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 17/326 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY +K FF P+ A+II P+Y+ I + S L+ + V V+ + I+P +F+ Sbjct: 23 LYLMKPFFYPLFWAIIISSIVHPLYARLI-LRWPSPNLLSAVLLVLVLLILILPTIFI-- 79 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--LKILSETFL 141 G L + + +S + + R L ++ G + +S + + L Q+ ++ LSE Sbjct: 80 -GSLLVSQSMSMYNTLSSDSSHIARNLQELLGWI-SSHPYIQKLDIDQNFWMEKLSEMLR 137 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 ++I S L M+ ALFFF RDG + Q L P + Sbjct: 138 SIA--NYIFTRLSSLTQNTLAAVAQFAIMLYALFFFIRDGEKLLQS----AMRLLPLGNQ 191 Query: 202 KISRIVPKVIRS--TFLGMTIIAIGEGLVLGS-AYWLAGVPSHVALGVITAIMAMIPG-G 257 + + + I + + L +T+I G LG+ A+W+AG+ V GVI + A+IPG G Sbjct: 192 RERLLFDRFINTAKSTLKVTLIIGGLQGTLGALAFWIAGIEGSVLWGVIMIVTAIIPGIG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I + I LLI G+++ + L+G + + +VD LRP L+ +++ L F + Sbjct: 252 CSIVWAPAGIILLISGHLWEGIMILLFGGLVISLVDNLLRPILLERDVQMHPLLIFLSTL 311 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 GG+ G G +GP++ +L+ I + Sbjct: 312 GGIVLFGFSGFVLGPIIASLMQSICQ 337 >gi|260544905|ref|ZP_05820726.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260756769|ref|ZP_05869117.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260760200|ref|ZP_05872548.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260763438|ref|ZP_05875770.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882585|ref|ZP_05894199.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|265993113|ref|ZP_06105670.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|265999137|ref|ZP_05465132.2| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|297249715|ref|ZP_06933416.1| hypothetical protein BAYG_02478 [Brucella abortus bv. 5 str. B3196] gi|260098176|gb|EEW82050.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260670518|gb|EEX57458.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673859|gb|EEX60680.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676877|gb|EEX63698.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872113|gb|EEX79182.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|262763983|gb|EEZ10015.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263092386|gb|EEZ16639.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|297173584|gb|EFH32948.1| hypothetical protein BAYG_02478 [Brucella abortus bv. 5 str. B3196] gi|326553915|gb|ADZ88554.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 354 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F + E Sbjct: 28 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 87 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLKTN 144 L ++ + + GI + R ++ +P + E W K + +S ++ + Sbjct: 88 TSLYQRLS-SREFGINGYIARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQGS 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 144 QL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQFL 200 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + +T Sbjct: 201 EKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALVWT 260 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ + Sbjct: 261 PAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLI 320 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGP++ A+ W S++A +E K++ Sbjct: 321 GINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 349 >gi|258623083|ref|ZP_05718096.1| putative lipoprotein [Vibrio mimicus VM573] gi|258584696|gb|EEW09432.1| putative lipoprotein [Vibrio mimicus VM573] Length = 361 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 17/345 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K F A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQSLKILS 137 +F + + + + HG + S + G A+ PQ + Sbjct: 83 IFGAIVQQGSKFSQNLYAWVTHG-GIQELFSHPWIVKGLSLANHYLPFEEISPQQIAQRI 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 F T G + + A G + ++ M+ LFF RD ++ S H+ P Sbjct: 142 GQFATTFGSNLVSISAKILGDA-TSFVMNFFLMLFVLFFLLRD----HDKIISAIRHILP 196 Query: 198 AYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + R+ + V +S +G + AI +GL G WLAG P + G + + I Sbjct: 197 LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFI 255 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G + + ++YL + G+ A L +W + +D LRPFL+ G + L F Sbjct: 256 PVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQGSAGMNTLMIF 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 F L+GG++ GL+GL GP++ A+ V I++E + ++K Sbjct: 316 FSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDK 360 >gi|237817216|ref|ZP_04596208.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|237788029|gb|EEP62245.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 372 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F + E Sbjct: 46 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 105 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLKTN 144 L ++ + + GI + R ++ +P + E W K + +S ++ + Sbjct: 106 TSLYQRLS-SREFGINGYIARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQGS 161 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 162 QL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQFL 218 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + +T Sbjct: 219 EKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALVWT 278 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ + Sbjct: 279 PAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLI 338 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGP++ A+ W S++A +E K++ Sbjct: 339 GINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 367 >gi|62317671|ref|YP_223524.1| hypothetical protein BruAb2_0762 [Brucella abortus bv. 1 str. 9-941] gi|83269654|ref|YP_418945.1| hypothetical protein BAB2_0776 [Brucella melitensis biovar Abortus 2308] gi|225686264|ref|YP_002734236.1| hypothetical protein BMEA_B0439 [Brucella melitensis ATCC 23457] gi|254691168|ref|ZP_05154422.1| hypothetical protein Babob68_13648 [Brucella abortus bv. 6 str. 870] gi|254695528|ref|ZP_05157356.1| hypothetical protein Babob3T_12990 [Brucella abortus bv. 3 str. Tulya] gi|254698951|ref|ZP_05160779.1| hypothetical protein Babob28_14959 [Brucella abortus bv. 2 str. 86/8/59] gi|254732398|ref|ZP_05190976.1| hypothetical protein Babob42_14739 [Brucella abortus bv. 4 str. 292] gi|256111637|ref|ZP_05452627.1| hypothetical protein Bmelb3E_03218 [Brucella melitensis bv. 3 str. Ether] gi|256256354|ref|ZP_05461890.1| hypothetical protein Babob9C_03093 [Brucella abortus bv. 9 str. C68] gi|261215918|ref|ZP_05930199.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|62197864|gb|AAX76163.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82939928|emb|CAJ12942.1| Protein of unknown function UPF0118 [Brucella melitensis biovar Abortus 2308] gi|225642369|gb|ACO02282.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260917525|gb|EEX84386.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|326410623|gb|ADZ67687.1| conserved hypothetical protein [Brucella melitensis M28] Length = 352 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F + E Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 90 KELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLKTN 144 L ++ + + GI + R ++ +P + E W K + +S ++ + Sbjct: 86 TSLYQRLS-SREFGINGYIARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQGS 141 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 142 QL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQFL 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + +T Sbjct: 199 EKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALVWT 258 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ + Sbjct: 259 PAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLI 318 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGP++ A+ W S++A +E K++ Sbjct: 319 GINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|262163961|ref|ZP_06031700.1| predicted permease [Vibrio mimicus VM223] gi|262027489|gb|EEY46155.1| predicted permease [Vibrio mimicus VM223] Length = 361 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 17/345 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K F A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQSLKILS 137 +F + + + + HG + S + G A+ PQ + Sbjct: 83 IFGAIVQQGSKFSQNLYAWVTHG-GIQELFSHPWIVKGLSLANHYLPFEEISPQQIAQRI 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 F T G + + A G + ++ M+ LFF RD ++ S H+ P Sbjct: 142 GQFATTFGSNLVSISAKILGDA-TSFVMNFFLMLFVLFFLLRD----HDKIISAIRHILP 196 Query: 198 AYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + R+ + V +S +G + AI +GL G WLAG P + G + + I Sbjct: 197 LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFI 255 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G + + ++YL + G+ A L +W + +D LRPFL+ G + L F Sbjct: 256 PVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQGSAGMNTLMIF 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 F L+GG++ GL+GL GP++ A+ V I++E + ++K Sbjct: 316 FSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDK 360 >gi|307294633|ref|ZP_07574475.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306879107|gb|EFN10325.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 369 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 2/192 (1%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A + G + +++ M+ FF RDG ++ +D + Y + + R V R Sbjct: 156 ALQIGQSAFSFLMALGVMLYLTFFLLRDGPLLAAMVDR-AAPMRTTYRQALMRQFVIVTR 214 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 +T G ++AI +G++ G +W G+P + GV+ ++IP G + + V+IYL + Sbjct: 215 ATIKGSIVVAIVQGVIGGMVFWALGLPGALLWGVLMGAFSLIPAVGTGLVWVPVAIYLFV 274 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G + L G + +VD LRP LVG ++P +GG+ G G+ IG Sbjct: 275 TGAVVEGLILAFCGMFVIGMVDNILRPVLVGRDTRIPDYVVLITTLGGIDLFGFNGIVIG 334 Query: 332 PVLMALIAVIWK 343 PV+ AL W Sbjct: 335 PVIAALFIATWN 346 >gi|222053456|ref|YP_002535818.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221562745|gb|ACM18717.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 360 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 18/189 (9%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG-------EG 226 LFF YRDG +++ S F + R + + IR+T T +A+G +G Sbjct: 170 LFFVYRDG----ERVMSTAVTRFAPDGNNMRRYLSR-IRAT---TTAVAVGTLFTCLVQG 221 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 ++ G Y+ A VP+ V +T++ A++P G I + ++ Y+ KG A L LW Sbjct: 222 IIAGIGYFFADVPAPVLFAGLTSVAALVPVVGTAIIWVPLAAYVAFKGAYVTAGLLALWC 281 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + D +RP VG +P G + GV T+GLLGL +GP++ A + +W E Sbjct: 282 VFMVGLADNAIRPIAVGAKGNVPVPAVVLGAICGVTTIGLLGLILGPIIFATVINLWHE- 340 Query: 346 IMAIKENKE 354 +A E E Sbjct: 341 -LATVERSE 348 >gi|227114498|ref|ZP_03828154.1| hypothetical protein PcarbP_16133 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 389 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 85/368 (23%), Positives = 173/368 (47%), Gaps = 31/368 (8%) Query: 6 LNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N +G+ + + I+ + +V+L F L +++ +L A ++ P+ S K + + Sbjct: 1 MNIKGLTKGFFILILFIVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGV 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWAS 120 +++ + + L +PL + ++E+ + +++ +N Q + + + +P WA Sbjct: 61 ASLLTVLIIFLLVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELIQHLP--RWAR 118 Query: 121 ELWTKHLSHPQSLKI---LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 +H + + KI LS+ LK G ++ G + + M+ LFF Sbjct: 119 HFLAEH-NLDNAAKIQQELSQVVLK--GGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFL 175 Query: 178 YRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +DG + ++ L+SL HL + V R+T G ++AI +G + G Sbjct: 176 LKDGAYLVNLILESLPLSTHVKHHLLVKF--------AAVSRATVKGTVVVAIVQGTLGG 227 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 A+ +AG+ + G + A +++IP G+ I + +I+L ++ A + + + + Sbjct: 228 IAFSIAGIEGSLLWGSLMAFLSLIPAVGSAIIWVPAAIFLFATDMLWQAIFIVAFFVLVI 287 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +VD LRP LVG K+P +GG+ G+ G IGP++ AL W +I++ Sbjct: 288 GLVDNILRPLLVGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACW--NILSG 345 Query: 350 KENKEKIS 357 ++N+E I Sbjct: 346 RDNQENIE 353 >gi|120555336|ref|YP_959687.1| hypothetical protein Maqu_2425 [Marinobacter aquaeolei VT8] gi|120325185|gb|ABM19500.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 363 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G F+ + A G + L + M+ FF RDG Q+L L P ++ Sbjct: 139 GGSQFLAKQALGIGQNTFQFFLGLALMVYLAFFLIRDG----QKLIELMIRALPLGDERE 194 Query: 204 SRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + K V R+T G +IAI +G + G +W+ G+ + GV+ AI++++P GA Sbjct: 195 RLLFAKFAEVTRATVKGNLLIAIIQGALGGMIFWILGITGALLWGVVMAIVSLLPAVGAA 254 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + +IYL G+I A L +G + + + D LRP LVG K+P +GG Sbjct: 255 IVWVPAAIYLAAVGDIVPAIILTAYGVVVIGLADNLLRPVLVGRDTKMPDYLVLLSTLGG 314 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + G+ G +GP++ AL W Sbjct: 315 IVMFGINGFVMGPLVAALFMAFW 337 >gi|225851276|ref|YP_002731510.1| membrane protein [Persephonella marina EX-H1] gi|225646547|gb|ACO04733.1| membrane protein [Persephonella marina EX-H1] Length = 355 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 22/299 (7%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K +S+ ++I+T V IVP + L + ++ L ++ A G + +++ Sbjct: 52 LDHKLKSTLLSSLISTAIVFMFIIVPSIVLIAFFTNQVISLYPVIIQAVSEGHTIEYYIN 111 Query: 112 DIPGGMWASELWTKHLSHPQSLKILS-ETFLKT---NGIDFIPRFASRFGM-IFLDYCLS 166 IP L + H QSL+ L E L T N + I F G +F++ Sbjct: 112 QIP------ILSSIHKIFLQSLQTLHIEIDLNTVLRNILSNIANFLIEQGKSLFINITFL 165 Query: 167 II---FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTI 220 II M++ +FF ++DG S+ ++ L P K + ++ K I+ LG + Sbjct: 166 IIGIGIMLVTIFFLFKDGESLYDRV----LKLIPLPEKDKNFLLSKTYTAIQGVVLGSVL 221 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 AI +G++ Y+ AG+ + IT I A +P GGA + + ++IYL I Sbjct: 222 TAIAQGILSFIGYFTAGLEFSLFWAFITFIAAFLPIGGASLVWIPIAIYLFISKGFLTGF 281 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 LWG + +VD ++P ++G + + FF ++GG+ G +G+F+ P+++ LI Sbjct: 282 LFALWGTFVISLVDNIIKPVVIGDKTNIHPVILFFAILGGLNLFGFIGIFLAPIVIVLI 340 >gi|261823604|ref|YP_003261710.1| hypothetical protein Pecwa_4411 [Pectobacterium wasabiae WPP163] gi|261607617|gb|ACX90103.1| protein of unknown function UPF0118 [Pectobacterium wasabiae WPP163] Length = 389 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 85/368 (23%), Positives = 173/368 (47%), Gaps = 31/368 (8%) Query: 6 LNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N +G+ + + I+ + V+L F L +++ +L A ++ P+ S K + + Sbjct: 1 MNIKGLTKGFFILILFAVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGI 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWAS 120 +++ + + + +PL + ++E+ + +++ +N Q + + L +P WA Sbjct: 61 ASLLTVLIIFLIVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELLQHLP--KWAR 118 Query: 121 ELWTKHLSHPQSLKI---LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 T+H + + KI LS+ LK G ++ G + + M+ LFF Sbjct: 119 HFLTEH-NLDNAAKIQQELSQVALK--GGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFL 175 Query: 178 YRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +DG + ++ L+SL HL + V R+T G ++AI +G + G Sbjct: 176 LKDGSYLVNLILESLPLSTHVKHHLLVKF--------AAVSRATVKGTAVVAIVQGTLGG 227 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 A+ +AG+ + G + A +++IP G+ I + +++L ++ A + + + + Sbjct: 228 IAFSIAGIEGSLLWGSLMAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVI 287 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +VD LRP LVG K+P +GG+ G+ G IGP++ AL W +I++ Sbjct: 288 GLVDNILRPLLVGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACW--NILSG 345 Query: 350 KENKEKIS 357 ++N+E I Sbjct: 346 RDNQENIE 353 >gi|253690490|ref|YP_003019680.1| hypothetical protein PC1_4130 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757068|gb|ACT15144.1| protein of unknown function UPF0118 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 406 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 85/371 (22%), Positives = 175/371 (47%), Gaps = 31/371 (8%) Query: 3 ETMLNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 E ++N +G+ + + I+ + +V+L F L +++ +L A ++ P+ S K + Sbjct: 5 EIVVNIKGLTKGFFILILFVVTLAFFDILAPYYSAILWAAVLAVIFHPLKSKIRQKLNDR 64 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGM 117 + +++ + + + +PL + ++E+ + +++ +N Q + + L +P Sbjct: 65 NGVASLLTVLIIFLIVFIPLGVIVSSLVVEINGVYTRLQDSNTQFPVVLAELLQHLP--K 122 Query: 118 WASELWTKHLSHPQSLKI---LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 WA +H + + KI LS+ LK G ++ G + + M+ L Sbjct: 123 WARHFLAEH-NLDNAAKIQQELSQVALK--GGQYLAGSVLLIGKGTFTFFIGFGVMLYLL 179 Query: 175 FFFYRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 FF +DG + ++ L+SL HL + V R+T G ++AI +G Sbjct: 180 FFLLKDGSYLVNLILESLPLSTHVKHHLLVKF--------AAVSRATVKGTAVVAIVQGT 231 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G A+ +AG+ + G + A +++IP G+ I + +++L ++ A + + Sbjct: 232 LGGIAFSIAGIEGSLLWGSLMAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFV 291 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + +VD LRP LVG K+P +GG+ G+ G IGP++ AL W +I Sbjct: 292 LVIGLVDNILRPLLVGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACW--NI 349 Query: 347 MAIKENKEKIS 357 ++ ++N+E I Sbjct: 350 LSGRDNQENIE 360 >gi|119387710|ref|YP_918744.1| hypothetical protein Pden_4988 [Paracoccus denitrificans PD1222] gi|119378285|gb|ABL73048.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 347 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 2/198 (1%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 FI A G + + + M+ LFF +RDG + + S L + + I + Sbjct: 145 QFIASRAMVIGQGAAQFSIGLGVMLYVLFFLFRDGRGLVGSI-SAASPLSAPHTRHIMQK 203 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V+++T G +IA +G + G +WL G+ + + GVI +++++P GA + + Sbjct: 204 FVDVVKATVTGNVVIATIQGTIGGVTFWLVGIEAALLCGVIMGVLSLLPAVGAFLVWLPF 263 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y LI G + G + + +D LRP LVG LP +GG+ MG+ Sbjct: 264 AVYYLITGAYLKGIVIMAVGVLVISTIDNLLRPPLVGRRSSLPDYVVLVSTLGGISQMGM 323 Query: 326 LGLFIGPVLMALIAVIWK 343 G +GP++ A +W Sbjct: 324 NGFVVGPLIAAFFIAVWS 341 >gi|186476728|ref|YP_001858198.1| hypothetical protein Bphy_1973 [Burkholderia phymatum STM815] gi|184193187|gb|ACC71152.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 382 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 37/345 (10%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +AL+ G F+SW +Y + + A + + ++ + + P ++ + Sbjct: 37 APFTTALLWGAILSFSSWGLYCKLATSLGGRRRWAATLIVLIILIVVLGPFVYAGFALGA 96 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTK-------------HLSHPQS 132 +++ + V G+P +P W++ IP G W + L+ P Sbjct: 97 HTRDITALVQHLMDAGLPDLPDWVARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAG 156 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 IL+ T+G+ + LSII FFFY G + L++ Sbjct: 157 KWILAAALAVTHGLGLL--------------ALSIILT----FFFYTGGEGAAAWLNAGM 198 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + ++ G+ A+ +G++ G W+AGVP+ LG+ T ++ Sbjct: 199 RRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCWIAGVPAPALLGLATFFLS 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IPGG + + +I+L G A L +WG + + + D ++P L+G +P + Sbjct: 259 VIPGGPVVVWLPAAIWLYHGGETGWAIFLVVWGVVVVGMSDNVVKPILIGKSSDMPLILV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++GG G LG+FIGP L+A+ + + + E +E I+ Sbjct: 319 MLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGSPEARELIA 363 >gi|89072498|ref|ZP_01159070.1| putative permease [Photobacterium sp. SKA34] gi|89051602|gb|EAR57055.1| putative permease [Photobacterium sp. SKA34] Length = 361 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 52/384 (13%) Query: 5 MLNPQGI--MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 ML P I W+++ + V+ + ++ + P++ A II P++ ++ Sbjct: 1 MLQPFKIEPRHWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + A+++ + + ++PLL +F ++ VSK +W++ GG Sbjct: 61 ANTAAMLSCFVLTVIIVIPLLVVFS-SIVHQGTTVSKESY---------QWITS--GG-- 106 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF--------ASRFGMIFLDYCLSII-- 168 EL+ +HP + K L + DF P+ AS+ G ++ I+ Sbjct: 107 PKELF----AHPYAQKALFYIDKYSPFHDFDPQVIIQKIATTASQVGSQAINISARILGD 162 Query: 169 ---------FMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFL 216 M+ LFF RD + ++ + H+ P + I V +V +S L Sbjct: 163 ATSILVNFMMMLFVLFFLLRD----NDKMIAAIRHVIPLSRSQEDAIMEEVEQVAKSAVL 218 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI 275 G + A+ +GL G A WL G P + G + A ++IP G + + S+YLL+ G Sbjct: 219 GSFLTAVAQGLAGGFAMWLCGFPG-LFWGSMMAFASLIPVVGTALIWLPASLYLLLVGQW 277 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A L WG I + +D +RP L+ G + L FF ++GG++ GL+G+ GP++ Sbjct: 278 EWALFLAGWGIIVVGSIDNVVRPLLMQGSSSMNTLLIFFSIIGGIQLFGLIGMIYGPIIF 337 Query: 336 ALIAVIWKESIMAIKENKEKISSN 359 + V++K + K+ E+ S+ Sbjct: 338 GVTLVLFKMYEVEFKDFLEQQDSH 361 >gi|37680914|ref|NP_935523.1| permease [Vibrio vulnificus YJ016] gi|37199664|dbj|BAC95494.1| predicted permease [Vibrio vulnificus YJ016] Length = 361 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 163/353 (46%), Gaps = 51/353 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F SK + ++++ V + + +VPLLF+F Sbjct: 32 YINSIIMAFIISLLMFPIHDWFESKMPKHRNMASLLSCVVLTFIIVVPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP---QSLKILSETFLKTNGI 146 +V + + +Q+ +W++ GG+ + L HP + LK+++E +L + I Sbjct: 85 AAIVQQGSVFSQN---TYQWVTH--GGI------QQVLGHPWIVKGLKLVNE-YLPFDNI 132 Query: 147 DF------IPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLD 189 D I + A+ FG + ++ + M+ LFF RD ++ Sbjct: 133 DAKSIAEKIGQLATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKII 188 Query: 190 SLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S H+ P + K+ + V +S +G + AI +G+ G WLAG P + G Sbjct: 189 SAIRHILPLSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + +IYLL+ G+ A L +W + +D LRPFL+ G Sbjct: 248 MMGFASFIPVVGTALIWIPATIYLLLTGDTGWAIFLAIWSIAIVGSIDNLLRPFLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG++ GL+GL GP++ A+ V I++E + ++ Sbjct: 308 GMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLDQQDN 360 >gi|262172300|ref|ZP_06039978.1| predicted permease [Vibrio mimicus MB-451] gi|261893376|gb|EEY39362.1| predicted permease [Vibrio mimicus MB-451] Length = 361 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K F A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQSLKILS 137 +F + + + + HG + S + G A+ PQ + Sbjct: 83 IFGAIVQQGSKFSQNLYAWVTHG-GIQELFSHPWIVKGLSLANHYLPFEEISPQQIAQRI 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 F T G + + A G + ++ M+ LFF RD ++ S H+ P Sbjct: 142 GQFATTFGSNLVSISAKILGDA-TSFVMNFFLMLFVLFFLLRD----HDKIISAIRHILP 196 Query: 198 AYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + R+ + V +S +G + AI +GL G WLAG P + G + + I Sbjct: 197 LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFI 255 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G + + ++YL + G A L +W + +D LRPFL+ G + L F Sbjct: 256 PVVGTALIWIPATLYLFLTGETTWAIFLAIWSIAVVGSIDNLLRPFLMQGSAGMNTLMIF 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 F L+GG++ GL+GL GP++ A+ V I++E + ++K Sbjct: 316 FSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDK 360 >gi|296160670|ref|ZP_06843485.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295889196|gb|EFG68999.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 371 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 11/339 (3%) Query: 5 MLNPQGIMRWMIMF--IILV--SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q I R +F IILV SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWA 119 + A + ++ + + P ++ + + ++V+ V + G+P +P W++ IP + Sbjct: 61 WAATLIVFIILIVVLGPFVYAGFAFGAHVHDIVALVQRLFEAGLPDLPSWVARIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL-FFFY 178 E + + L+ S I L +I A I + + L ++ + I L FFFY Sbjct: 121 IETFWERLTSSNSELIAQLRTLAAPAGKWILAAA-----IAVTHGLGLLALSIVLAFFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + L++ + + + ++ G+ A+ +G++ G W+AGV Sbjct: 176 TGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 236 PAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+G +P + G++GG G LG+FIGP L+A+ Sbjct: 296 ILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAV 334 >gi|149185062|ref|ZP_01863379.1| hypothetical protein ED21_18452 [Erythrobacter sp. SD-21] gi|148831173|gb|EDL49607.1| hypothetical protein ED21_18452 [Erythrobacter sp. SD-21] Length = 357 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 152/323 (47%), Gaps = 19/323 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P+L A++ P+Y F+++++ T A++ + ++ ++P L++ + E Sbjct: 33 FFQPLLWAVLAAILFQPLYRWFLTRRKGRETQAALLTLLVILLAVVLPALWIGSAVVAE- 91 Query: 90 KELVSKVVLANQHG-IPVPRW----LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ LA + G I V + S +P + AS L L ++ + F++ + Sbjct: 92 ---ATRLFLAFRDGQIDVAMYFEQVFSALPANIQAS-LDRAGLGDLGEVQAQATEFVQAS 147 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + I + A G + L + FF RDG +IS+Q+ + P Sbjct: 148 -LGLIAQQALAIGGSVFGFVLGFAIALYVGFFLLRDGRAISEQMLA----ALPFERGIAD 202 Query: 205 RIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPI 260 R+ + ++R+T G ++ + +G + +W+ G+PS + LGVI AI +++P G I Sbjct: 203 RLAERFLVLVRATIKGSVVVGLVQGALGAFTFWIVGIPSVLLLGVIMAIASLLPAVGPAI 262 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +IYLL G I+ + + G + ++D LRP LVG +P +GG+ Sbjct: 263 VWVPAAIYLLATGAIWQGVVVIVSGVAVIGMIDNVLRPILVGRDTGIPDWLILITTLGGI 322 Query: 321 RTMGLLGLFIGPVLMALIAVIWK 343 GL G+ IGP++ L W Sbjct: 323 ALFGLSGIVIGPLVAGLFLAGWS 345 >gi|295676075|ref|YP_003604599.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] gi|295435918|gb|ADG15088.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 371 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 37/352 (10%) Query: 5 MLNPQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q I R +F ++V SL L F +L I+ ++SW +Y Sbjct: 1 MKSDQLIERLAAVFALIVLVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTGVVGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP----- 114 A + + ++ + + P ++ + + E+V+ V + G+P +P W+ IP Sbjct: 61 LAATMIVLIILVVVLGPFVYAGFAFGAHVHEIVALVQRLFESGLPDLPPWVQRIPLVGSS 120 Query: 115 -GGMWA------SELWT--KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W SEL + L+ P IL+ T+G+ + L Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAALAVTHGLGLL--------------AL 166 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 SI+ FFFY G + L++ + + + + ++ G+ A+ + Sbjct: 167 SIVLA----FFFYTGGEGAAAWLNAGMRRVAGERAEYLLALAGSTVKGVVYGILGTALVQ 222 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ G +W+AGVP+ LG++T ++++PGG + + +I+L G+ A L +WG Sbjct: 223 GVLAGFGFWVAGVPAPALLGLVTFFLSVVPGGPVVVWLPAAIWLYQGGSTGWAIFLVVWG 282 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + + D ++P L+G +P + G++GG G LG+FIGP L+A+ Sbjct: 283 LLVVGMADNVIKPILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAV 334 >gi|330447452|ref|ZP_08311101.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491643|dbj|GAA05598.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 361 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 89/374 (23%), Positives = 164/374 (43%), Gaps = 50/374 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ + V+ + ++ + P++ A II P++ ++ + A+++ Sbjct: 11 HWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSCF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++PLL +F ++ VSK W++ GG EL+ + Sbjct: 71 ILTVIIVIPLLIVFS-SIVHQGTTVSKESY---------EWITS--GG--PKELF----A 112 Query: 129 HPQSLKILS--------ETFLKTNGIDFIPRFASRFGMIFLDYCLSII-----------F 169 HP + K L F I I AS+ G L+ I+ Sbjct: 113 HPYAQKALGFIDKYSPFHNFDPQVIIQKIATTASQVGSQALNISARILGDATSILVNFMM 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 M+ LFF RD + ++ + H+ P + +I V +V +S LG + A+ +G Sbjct: 173 MLFVLFFLLRD----NDKMIAAIRHVIPLSRSQEDEIMNEVEQVAKSAVLGSFLTAVAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A WL G P + G + A ++IP G + + S+YLL+ G A L WG Sbjct: 229 IAGGFAMWLCGFPG-LFWGSMMAFASLIPVVGTALIWLPASLYLLLIGQWEWALFLAGWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I + +D +RP L+ G + L FF ++GG++ GL+G+ GP++ + V++K Sbjct: 288 VIVVGSIDNVVRPLLMQGSSSMNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMY 347 Query: 346 IMAIKENKEKISSN 359 + K+ E+ N Sbjct: 348 EVEFKDFLEQQDKN 361 >gi|317402762|gb|EFV83307.1| exported protein [Achromobacter xylosoxidans C54] Length = 373 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLFPAY 199 F+ A G + +S M+ LFF RDG ++Q++ ++ HLF Sbjct: 140 QFLATQALSIGQDTFQFVVSFAIMLYLLFFLLRDGPQLAQRVKRAVPLSETHKHHLF--- 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 R V+R+T G +A +G + G + + G+ + GVI ++++P GA Sbjct: 197 -----RKFTTVVRATVKGNIAVAASQGALGGIIFSILGIQGALLWGVIMGFLSLLPAVGA 251 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + V+IY L+ G L +G + + +VD LRP LVG K+P +G Sbjct: 252 GLIWAPVAIYFLLTGATIKGVVLIAFGVLVIGMVDNVLRPILVGKDTKMPDYVVLISTLG 311 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G+ GL G IGP++ AL W Sbjct: 312 GMALFGLNGFVIGPLIAALFMASWD 336 >gi|293604365|ref|ZP_06686772.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817242|gb|EFF76316.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 365 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 2/198 (1%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F+ A G + +S M+ LFF RDG +S ++ L A+ + + R Sbjct: 146 QFLATQALSIGQDTFQFVISFGIMLYLLFFLLRDGPELSARIKR-AMPLSEAHKQHLFRK 204 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V+R+T G +A +G + G + + + + GVI ++++P GA + + V Sbjct: 205 FTTVVRATVKGNIAVAAAQGALGGIIFSVLSIQGALLWGVIMGFLSLLPAVGAGLIWAPV 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY L+ G + L +G + + +VD LRP LVG K+P +GG+ GL Sbjct: 265 AIYFLLTGAVVKGAVLIAFGVLVIGMVDNVLRPILVGKDTKMPDYVVLISTLGGMALFGL 324 Query: 326 LGLFIGPVLMALIAVIWK 343 G IGP++ AL W Sbjct: 325 NGFVIGPLIAALFMASWD 342 >gi|308185989|ref|YP_003930120.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] gi|308056499|gb|ADO08671.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] Length = 412 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 15/335 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L +F+P+L A I+ P+ + S+ + + A+I T+ +CL + L + + Sbjct: 26 LSPYFSPILWAAILAVIFHPLKTWLRSRLGDRNGVAALI-TLFCICLIVFTPLAIIASSL 84 Query: 87 LEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASE-LWTKHLSHPQSLKILSETFLKT 143 + V + N P L +P WA L +L + + ++ +F Sbjct: 85 VVETNAVYHKLQTNSSQFPAVFADLLQHLP--RWAKHFLAENNLDNAEQIQQKLSSFALK 142 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G ++ A G + + M+ LFF +DG S + + E L + + K Sbjct: 143 GG-QYVAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDG---SYLVHLILEALPLSTYVKH 198 Query: 204 SRIV--PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPI 260 +V V R+T G ++ I +G++ G A+W G+ + G + A +++IP G+ I Sbjct: 199 HLMVKFAAVARATVKGTVVVGIVQGILGGLAFWFTGIDGSLLWGALMAFLSLIPAVGSAI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +I+ G ++ L + + + +VD LRP LVG K+P +GG+ Sbjct: 259 IWVPAAIFFFATGALWKGLFLVGFFVVIVGLVDNILRPLLVGKDTKMPDYMILIATLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G IGPV+ AL W ++++ ++N+E Sbjct: 319 EIYGINGFVIGPVIAALFIACW--NLLSGRDNREN 351 >gi|311087020|gb|ADP67100.1| putative inner membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 360 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 31/272 (11%) Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF------ 152 +N +P WL +IP + +++ + +T L ++G + I + Sbjct: 102 SNNLELPELAWLQNIP--LMGRKIFNSY-----------QTLLNSDGGELIHKIRPYMGR 148 Query: 153 ASRFGMIFLDYC-LSIIFMIIALFF---FYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 A+ F +I + C L II I+ LFF Y +G IS + L K I + Sbjct: 149 ATEFFIIQVRNCGLFIIHSILMLFFSALLYWNGEKISISIHHFAYRLSEKNGKAILLLAT 208 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + +R+ LG+ + A+ + L+ G ++GVP L +I +I G PI ++ I Sbjct: 209 QAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLMIIIFFSCLIQLGPLPILIPSI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L + T L +W +FI+D LRPF + LP L T G++GG+ T G++G Sbjct: 268 WLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIGADLPILLTLSGVIGGLLTFGMIG 326 Query: 328 LFIGPVLMAL-----IAVIWKESIMAIKENKE 354 LFIGPV++ + I+ I+ SI + EN Sbjct: 327 LFIGPVVLVIFYRLTISWIYGISIASFLENTS 358 >gi|85858614|ref|YP_460816.1| hypothetical protein SYN_02943 [Syntrophus aciditrophicus SB] gi|85721705|gb|ABC76648.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 363 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 28/334 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVIAT-VSVM 71 I +I SL+ L+ F ++ +++I +WP F+ K E LAV A ++++ Sbjct: 21 IGILIASSLWILRPFLPSLIWSVMIVVATWP----FMLKMETCLWRKRGLAVAAMMIAML 76 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELWTKHLSH 129 LF+VP + + + V +P +P WLS +P G + W + Sbjct: 77 TLFVVPFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVPVVGSKLNTAWEGVRTG 136 Query: 130 PQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 P+ + + + G + + A G+I L++ L++I I Y +G + S+ Sbjct: 137 PEGI---AARLVPYAGKLLSWFLSQAGSVGIIALEFLLTVIIAAI----LYVNGETASKG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + ++ + K +R LG+ A+ + L+ G +AGVP+ V+ Sbjct: 190 VFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGVPAAT---VL 246 Query: 248 TAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 T +M M+ G + F AV I+L G T L +W I +D LRP L+ Sbjct: 247 TGVMFMLCIAQLGPGLVLFPAV-IWLYWSGQTTWGTMLLVW-TIFACTIDNLLRPILIKK 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 LP L F G++GG+ + G++GLFIGPV++++ Sbjct: 305 GADLPMLLIFAGVIGGLASFGIVGLFIGPVVLSV 338 >gi|322832729|ref|YP_004212756.1| hypothetical protein Rahaq_2014 [Rahnella sp. Y9602] gi|321167930|gb|ADW73629.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 369 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 88/360 (24%), Positives = 168/360 (46%), Gaps = 29/360 (8%) Query: 16 IMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I+FI+ ++ + L+ +++ VL A+I+ P+ + + + ++++ TV ++CL Sbjct: 14 ILFIVTLAFFDVLRPYYSSVLWAIILAVIFNPLKNRLKQVVGDRNGVVSLL-TVLIICLI 72 Query: 75 I-VPLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASELWTKHL--SH 129 + PL + LE + +K+ NQ +PV ++ +P WA + H S Sbjct: 73 VFTPLAIITSSLALEFNAVYTKL-QGNQTQLPVILADFIHHLP--RWARHFLSDHDLDST 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQL 188 + K LS+ L+ G ++ G + + M+ LFF +DG + ++ L Sbjct: 130 AEIQKKLSDVALQ--GSQYLAGSVFVIGKSTFGFVVGFGIMLYILFFLIKDGAYLVNLTL 187 Query: 189 DSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +L HLF + V R+T G ++A+ +G + G A+++AG+ + Sbjct: 188 ATLPLSRYVKHHLFMKF--------AAVSRATVKGTVVVAVVQGALGGIAFYIAGLDGSL 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A +++IP G+ I + +IY G ++ + + + + IVD LRP LV Sbjct: 240 LWGALMAFLSIIPAVGSAIIWVPAAIYFFASGMLWQGIFIVAFFVVVIGIVDNVLRPLLV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 G K+P +GG+ G+ G IGP++ AL W S + N ++I+ +F Sbjct: 300 GKDTKMPDYLILVTTLGGMEVYGINGFVIGPLIAALFIACWNILSGRDHQNNTDEINEDF 359 >gi|307730302|ref|YP_003907526.1| hypothetical protein BC1003_2282 [Burkholderia sp. CCGE1003] gi|307584837|gb|ADN58235.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 371 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 37/352 (10%) Query: 5 MLNPQGIMRWMIMF--IILV--SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q I R +F IILV SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAAVGGRRR 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP----- 114 + A + ++ + + P ++ + + ++++ V + G+P +P W++ IP Sbjct: 61 WAATLMVFVILIVVLGPFVYAGFAFGAHVHDIIALVQRLFEAGLPDLPPWVARIPVVGSS 120 Query: 115 -GGMWA------SELWT--KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W SEL + L+ P ILS T+G+ + L Sbjct: 121 IQSFWETATSSNSELIAQLRTLAAPAGKWILSAAIAVTHGLGLL--------------AL 166 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 SI+ FFFY G L++ + + + ++ G+ A+ + Sbjct: 167 SIVLA----FFFYTGGEGAGAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQ 222 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ G W+AGVP+ LG+ T +++IPGG I + +I+L G A L +WG Sbjct: 223 GVLAGFGCWIAGVPAPALLGLATFFLSVIPGGPVIVWLPAAIWLYHGGATGWAIFLVVWG 282 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + + D ++P L+G +P + G++GG G LG+FIGP L+A+ Sbjct: 283 VLVVGMSDNVIKPILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAV 334 >gi|197118593|ref|YP_002139020.1| membrane protein [Geobacter bemidjiensis Bem] gi|197087953|gb|ACH39224.1| membrane protein UPF0118 [Geobacter bemidjiensis Bem] Length = 355 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 4/171 (2%) Query: 178 YRDG-FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 YRDG ++S + L A + ++ + + + +G + +G++ G YW+A Sbjct: 174 YRDGERAVSVCIAKLAPDQRRA--QHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVA 231 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 GVP+ + G +TAI A++P G + + + + ++G+ NA L LW + + + D Sbjct: 232 GVPAPIFCGALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNA 291 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +RP VG + L G + GV MG+LGL +GP++ A++ IW + + Sbjct: 292 IRPLAVGASSDVSVLAVVAGAICGVVIMGVLGLIVGPLIFAVLFSIWDDVV 342 >gi|94495544|ref|ZP_01302124.1| hypothetical protein SKA58_05830 [Sphingomonas sp. SKA58] gi|94424932|gb|EAT09953.1| hypothetical protein SKA58_05830 [Sphingomonas sp. SKA58] Length = 370 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 28/341 (8%) Query: 18 FIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 F++LVS+ F ++ FFA +L +I+ P++ ++ + A++ + ++ + Sbjct: 25 FVLLVSVAFALVIEPFFAAILWGVIVAIVFAPVHHRIRAQMPGRTNAAALLTLLLILLVV 84 Query: 75 IVPLLFL---------FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 IVP L ++YG ++ E ++ V L +P WL + L Sbjct: 85 IVPAFVLGAALLQEATYFYGKVQSGE-INFVRLFYDVIAALPDWLRP-----YVQRLGIT 138 Query: 126 HLSHPQSL--KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + Q + + L+ +F G F + G + +++ M+ FF RDG Sbjct: 139 NFYAAQEMVTRGLTSSFRTLAGQAF------QIGQSAFSFFVALGVMLYLAFFLLRDGDW 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++++ + I + V V R+T G ++AI +GL+ G +W + + Sbjct: 193 LARKVAAAAPLRAGQRTALIEQFV-IVTRATIKGSIVVAIVQGLIGGLVFWALDIQGALL 251 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV+ +++P G I + V+IYL G ++ L + GA+ + VD LRP LVG Sbjct: 252 WGVLMGAFSLLPAIGTAIVWVPVAIYLFATGAVWQGVVLVVCGALVIGSVDNVLRPILVG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++P +GG+ G G+ IGPV+ AL W Sbjct: 312 RDTRIPDYVVLISTLGGLELFGFNGIVIGPVIAALFIATWN 352 >gi|227328036|ref|ZP_03832060.1| hypothetical protein PcarcW_12170 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 404 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 84/368 (22%), Positives = 173/368 (47%), Gaps = 31/368 (8%) Query: 6 LNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N +G+ + + I+ + +V+L F L +++ +L A ++ P+ S K + + Sbjct: 1 MNIKGLTKGFFILILFIVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGV 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWAS 120 +++ + + L +PL + ++E+ + +++ +N Q + + + +P WA Sbjct: 61 ASLLTVLIIFLLVFIPLGVIVSSLVVEINGVYTRLQDSNTQFPVVLAELIQHLP--KWAR 118 Query: 121 ELWTKHLSHPQSLKI---LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 +H + + KI LS+ LK G ++ G + + M+ LFF Sbjct: 119 HFLAEH-NLDNAAKIQQELSQVVLK--GGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFL 175 Query: 178 YRDG-FSISQQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +DG + ++ L+SL HL + V R+T G ++AI +G + G Sbjct: 176 LKDGAYLVNLILESLPLSTHVKHHLLVKF--------AAVSRATVKGTVVVAIVQGTLGG 227 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 A+ +AG+ + G + A +++IP G+ I + +++L ++ A + + + + Sbjct: 228 IAFSIAGIEGSLLWGSLMAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVI 287 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +VD LRP LVG K+P +GG+ G+ G IGP++ AL W +I++ Sbjct: 288 GLVDNILRPLLVGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACW--NILSG 345 Query: 350 KENKEKIS 357 ++N+E I Sbjct: 346 RDNQENIE 353 >gi|311105126|ref|YP_003977979.1| hypothetical protein AXYL_01931 [Achromobacter xylosoxidans A8] gi|310759815|gb|ADP15264.1| hypothetical protein AXYL_01931 [Achromobacter xylosoxidans A8] Length = 363 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 2/198 (1%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F+ A G + +S M+ LFF RDG +S +L L + + + R Sbjct: 146 QFLATQALNIGQDTFQFVISFGIMLYLLFFLLRDGPLLSARLKR-AMPLSDTHKQHLLRK 204 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V+R+T G +A +G + G + + + + GVI ++++P GA + + V Sbjct: 205 FTTVVRATVKGNVAVAAAQGALGGIIFSILSIQGALLWGVIMGFLSLLPAIGAGLIWAPV 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY L+ G L L+G + + +VD LRP LVG K+P +GG+ GL Sbjct: 265 AIYFLLTGATIKGVVLILFGVLVIGMVDNVLRPILVGKDTKMPDYVVLISTLGGMALFGL 324 Query: 326 LGLFIGPVLMALIAVIWK 343 G IGP++ AL W Sbjct: 325 NGFVIGPLIAALFMASWD 342 >gi|170733033|ref|YP_001764980.1| hypothetical protein Bcenmc03_1686 [Burkholderia cenocepacia MC0-3] gi|169816275|gb|ACA90858.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 390 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 31/334 (9%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I SLY L+ F ++ A I +WP+ + ++ AVI VM L ++ Sbjct: 36 LLICGSLYILRPFLLALVWAATIVVATWPLLHE-VQRRLRCRRGPAVI----VMLLALMV 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIP------VPRWLSDIP-GGMWASELWTKHLSHP 130 ++ L YG + ++ ++ G+P P WL+ +P G A+ W Sbjct: 91 VIVLPIYGAVSTLAAHAEEIMTLLKGLPNYTLPPPPGWLAKLPLAGTHATREW------- 143 Query: 131 QSLKILSETFLKTNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 Q+L + + R AS R I + ++ +II F + G ++ Sbjct: 144 QTLSDAGPGGVLATLQPYASRLASWLLVRASAIGVLVLHLLLTVIICGILFAK-GEAVGL 202 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + PA + R+V IR+ LG+ + A+ + + G W A VP GV Sbjct: 203 TVTRVAQCVAPANGAAMVRLVEHAIRAVALGVMVTALAQSALGGLGLWGASVPYA---GV 259 Query: 247 ITAIM---AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +TAI+ + G + A +L + A LF W ++ + +D +LRP L+ Sbjct: 260 LTAILFIFCLAQLGPLLPLLACVTWLFVHDAKLAAILLFGW-SLGVTALDNSLRPILIRR 318 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 I LP + G++GG+ G++GLFIGPV++A+ Sbjct: 319 SIALPMVLILAGVLGGLIAFGMIGLFIGPVMLAV 352 >gi|306838115|ref|ZP_07470972.1| transmembrane protein [Brucella sp. NF 2653] gi|306406852|gb|EFM63074.1| transmembrane protein [Brucella sp. NF 2653] Length = 361 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 35 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 95 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 148 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 149 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 205 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 206 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 265 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 266 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 325 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 326 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 356 >gi|237756275|ref|ZP_04584832.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691557|gb|EEP60608.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 355 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%) Query: 173 ALFFFYRDGFSISQQLDSL-------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 +FF ++DG+ + + S+ ++LF + + ++ LG +AI + Sbjct: 174 TIFFLFKDGYKLYNLVYSIIPLEKEEKDYLFSNSYAAVQAVI--------LGSVFVAIAQ 225 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + + +AGV + L +T A IP GGA + + V+IYL++ + L+ Sbjct: 226 AIASLIGFLVAGVEYSLVLTFLTFFAAFIPFGGASLVWVPVAIYLIVSKGLLVGILFTLY 285 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 G + VD +RP +VG I + + FF ++GG+ T G LG+FI PV++ALI Sbjct: 286 GTFVISTVDNIIRPIVVGTKIDMHPMIMFFAIIGGLSTFGFLGIFIAPVIVALI 339 >gi|23500209|ref|NP_699649.1| hypothetical protein BRA0460 [Brucella suis 1330] gi|161620528|ref|YP_001594414.1| hypothetical protein BCAN_B0462 [Brucella canis ATCC 23365] gi|254699715|ref|ZP_05161543.1| hypothetical protein Bsuib55_02471 [Brucella suis bv. 5 str. 513] gi|254702852|ref|ZP_05164680.1| hypothetical protein Bsuib36_02714 [Brucella suis bv. 3 str. 686] gi|254706027|ref|ZP_05167855.1| hypothetical protein BpinM_03248 [Brucella pinnipedialis M163/99/10] gi|254720517|ref|ZP_05182328.1| hypothetical protein Bru83_13551 [Brucella sp. 83/13] gi|256015243|ref|YP_003105252.1| hypothetical protein BMI_II457 [Brucella microti CCM 4915] gi|256029693|ref|ZP_05443307.1| hypothetical protein BpinM2_03388 [Brucella pinnipedialis M292/94/1] gi|256157846|ref|ZP_05455764.1| hypothetical protein BcetM4_03193 [Brucella ceti M490/95/1] gi|256253192|ref|ZP_05458728.1| hypothetical protein BcetB_02609 [Brucella ceti B1/94] gi|260167217|ref|ZP_05754028.1| hypothetical protein BruF5_02324 [Brucella sp. F5/99] gi|23463812|gb|AAN33654.1| membrane protein, putative [Brucella suis 1330] gi|161337339|gb|ABX63643.1| Hypothetical protein BCAN_B0462 [Brucella canis ATCC 23365] gi|255997903|gb|ACU49590.1| hypothetical protein BMI_II457 [Brucella microti CCM 4915] Length = 352 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 86 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 140 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 197 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 257 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 317 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|308446460|ref|XP_003087184.1| hypothetical protein CRE_07198 [Caenorhabditis remanei] gi|308260230|gb|EFP04183.1| hypothetical protein CRE_07198 [Caenorhabditis remanei] Length = 241 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 68/117 (58%) Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F I++LFFFYRDG +I +Q+ + L + + R+ G+ + A+ + + Sbjct: 125 FAIMSLFFFYRDGQTILEQVSKALQMLIGPRIHHYLDTISETTRAVVYGVGLTAVAQAFL 184 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G +Y++AGVP+ + L ++T +MA+IP G P+++ AVS++L +G A + WG Sbjct: 185 AGVSYFVAGVPNPMVLTIVTFLMALIPFGPPVAYGAVSLWLFSQGQTMEAIGVMAWG 241 >gi|300715132|ref|YP_003739935.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060968|emb|CAX58075.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 369 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/357 (23%), Positives = 167/357 (46%), Gaps = 34/357 (9%) Query: 15 MIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+FI+ V+ L L +++ VL A I+ P+ + + + LA AT+ V+CL Sbjct: 13 LILFIVTVAFLDVLGPYYSSVLWAAILAVIFHPMKTK-LRQMMGDRNGLATFATLVVICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI----PGGMWASELWTKHL- 127 + PL L +E + +K+ + + +P ++D+ PG WA T+H Sbjct: 72 IVFTPLAILVSSMAIEFNVVYTKL---QSNNMQLPTIMADVMQHLPG--WARSFLTEHQL 126 Query: 128 -SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSIS 185 + Q + LS+ ++ G ++ G + + M+ LFF +DG + ++ Sbjct: 127 DTAAQIQQKLSQVAMQ--GGQYLAGSVFLIGKSTFGFTVGFGIMLYLLFFLLKDGAYLVN 184 Query: 186 QQLDSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L++L HLF + V R+T G ++A+ +G + A+W+ G+ Sbjct: 185 LILEALPLSSYVKHHLFMKF--------AAVSRATVKGTVVVAVVQGALGALAFWITGID 236 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G + A +++IP G+ I + +I+ G ++ + + + + +VD LRP Sbjct: 237 GILLWGALIAFLSLIPAVGSAIVWVPAAIFFFASGVLWKGLFIVGFFVVVIGLVDNILRP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LVG K+P +GG+ G+ G IGP++ A+ W ++++ ++N+E Sbjct: 297 LLVGKDTKMPDYLILIATLGGMEIYGINGFVIGPLIAAMFIACW--NLLSGRDNREN 351 >gi|15616743|ref|NP_239955.1| putative inner membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11387270|sp|P57223|Y123_BUCAI RecName: Full=UPF0118 membrane protein BU123 gi|25307062|pir||A84944 hypothetical protein yb1688 [imported] - Buchnera sp. (strain APS) gi|10038806|dbj|BAB12841.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 360 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 31/272 (11%) Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF------ 152 +N +P WL +IP + +++ + +T L ++G + I + Sbjct: 102 SNDLELPELAWLQNIP--LMGRKIFNSY-----------QTLLNSDGGELIHKIRPYMGH 148 Query: 153 ASRFGMIFLDYC-LSIIFMIIALFF---FYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 A+ F +I + C L I+ I+ LFF Y +G IS + L K I + Sbjct: 149 ATEFFIIQVRNCGLFIVHSILMLFFSALLYWNGEKISISIHHFAYRLSEKNGKAILLLAT 208 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + +R+ LG+ + A+ + L+ G ++GVP L +I +I G PI ++ I Sbjct: 209 QAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLMIIIFFSCLIQLGPLPILIPSI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L + T L +W +FI+D LRPF + LP L T G++GG+ T G++G Sbjct: 268 WLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIGADLPILLTLSGVIGGLLTFGMIG 326 Query: 328 LFIGPVLMAL-----IAVIWKESIMAIKENKE 354 LFIGPV++ + I+ I+ SI + EN Sbjct: 327 LFIGPVVLVIFYRLTISWIYGISIASFLENTS 358 >gi|148558731|ref|YP_001257437.1| hypothetical protein BOV_A0400 [Brucella ovis ATCC 25840] gi|225628899|ref|ZP_03786933.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|148370016|gb|ABQ62888.1| putative membrane protein [Brucella ovis ATCC 25840] gi|225616745|gb|EEH13793.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 372 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 46 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 106 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 159 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 160 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 216 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 217 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 276 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 277 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 336 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 337 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 367 >gi|260568237|ref|ZP_05838706.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261220299|ref|ZP_05934580.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313468|ref|ZP_05952665.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261750180|ref|ZP_05993889.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261753452|ref|ZP_05997161.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261756621|ref|ZP_06000330.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265985549|ref|ZP_06098284.1| conserved hypothetical protein [Brucella sp. 83/13] gi|265986704|ref|ZP_06099261.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996354|ref|ZP_06108911.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|294853728|ref|ZP_06794400.1| hypothetical protein BAZG_02708 [Brucella sp. NVSL 07-0026] gi|260154902|gb|EEW89983.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260918883|gb|EEX85536.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261302494|gb|EEY05991.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736605|gb|EEY24601.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261739933|gb|EEY27859.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261743205|gb|EEY31131.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262550651|gb|EEZ06812.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264658901|gb|EEZ29162.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|264664141|gb|EEZ34402.1| conserved hypothetical protein [Brucella sp. 83/13] gi|294819383|gb|EFG36383.1| hypothetical protein BAZG_02708 [Brucella sp. NVSL 07-0026] Length = 354 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 28 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 88 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 142 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 198 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 199 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 258 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 259 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 318 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 319 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 349 >gi|219681498|ref|YP_002467883.1| hypothetical protein BUAP5A_121 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471179|ref|ZP_05635178.1| putative inner membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624341|gb|ACL30496.1| hypothetical protein BUAP5A_121 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 360 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 31/272 (11%) Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF------ 152 +N +P WL +IP + +++ + +T L ++G + I + Sbjct: 102 SNDLELPELAWLQNIP--LMGRKIFNSY-----------QTLLNSDGGELIHKIRPYMGR 148 Query: 153 ASRFGMIFLDYC-LSIIFMIIALFF---FYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 A+ F +I + C L I+ I+ LFF Y +G IS + L K I + Sbjct: 149 ATEFFIIQVRNCGLFIVHSILMLFFSALLYWNGEKISISIHHFAYRLSEKNGKAILLLAT 208 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + +R+ LG+ + A+ + L+ G ++GVP L +I +I G PI ++ I Sbjct: 209 QAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLMIIIFFSCLIQLGPLPILIPSI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L + T L +W +FI+D LRPF + LP L T G++GG+ T G++G Sbjct: 268 WLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIGADLPILLTLSGVIGGLLTFGMIG 326 Query: 328 LFIGPVLMAL-----IAVIWKESIMAIKENKE 354 LFIGPV++ + I+ I+ SI + EN Sbjct: 327 LFIGPVVLVIFYRLTISWIYGISIASFLENTS 358 >gi|219682054|ref|YP_002468438.1| hypothetical protein BUAPTUC7_122 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621787|gb|ACL29943.1| hypothetical protein BUAPTUC7_122 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085867|gb|ADP65949.1| putative inner membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086437|gb|ADP66518.1| putative inner membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 360 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 31/272 (11%) Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF------ 152 +N +P WL +IP + +++ + +T L ++G + I + Sbjct: 102 SNDLELPELAWLQNIP--LMGRKIFNSY-----------QTLLNSDGGELIHKIRPYMGR 148 Query: 153 ASRFGMIFLDYC-LSIIFMIIALFF---FYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 A+ F ++ + C L II I+ LFF Y +G IS + L K I + Sbjct: 149 ATEFFIVQVRNCGLFIIHSILMLFFSALLYWNGEKISISIHHFAYRLSEKNGKAILLLAT 208 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + +R+ LG+ + A+ + L+ G ++GVP L +I +I G PI ++ I Sbjct: 209 QAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLMIIIFFSCLIQLGPLPILIPSI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L + T L +W +FI+D LRPF + LP L T G++GG+ T G++G Sbjct: 268 WLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIGADLPILLTLSGVIGGLLTFGMIG 326 Query: 328 LFIGPVLMAL-----IAVIWKESIMAIKENKE 354 LFIGPV++ + I+ I+ SI + EN Sbjct: 327 LFIGPVVLVIFYRLTISWIYGISIASFLENTS 358 >gi|320155419|ref|YP_004187798.1| putative permease [Vibrio vulnificus MO6-24/O] gi|319930731|gb|ADV85595.1| predicted permease [Vibrio vulnificus MO6-24/O] Length = 361 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 51/353 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F SK + ++++ V + + +VPLLF+F Sbjct: 32 YINSIIMAFIISLLMFPIHDWFESKMPKHRNMASLLSCVVLTFIIVVPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP---QSLKILSETFLKTNGI 146 +V + + +Q+ +W++ GG+ + L HP + LK+++E +L + I Sbjct: 85 AAIVQQGSVFSQN---TYQWVTH--GGI------QQVLGHPWIVKGLKLVNE-YLPFDNI 132 Query: 147 DF------IPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLD 189 D I + A+ FG + ++ + M+ LFF RD ++ Sbjct: 133 DAKSIAEKIGQLATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKII 188 Query: 190 SLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S H+ P + K+ + V +S +G + AI +G+ G WLAG P + G Sbjct: 189 SAIRHILPLSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + +IYL + G+ A L +W + +D LRPFL+ G Sbjct: 248 MMGFASFIPVVGTALIWIPATIYLFLTGDTGWAIFLAIWSIAIVGSIDNLLRPFLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG++ GL+GL GP++ A+ V I++E + ++ Sbjct: 308 GMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLDQQDN 360 >gi|198283230|ref|YP_002219551.1| hypothetical protein Lferr_1102 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666938|ref|YP_002425462.1| hypothetical protein AFE_0988 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247751|gb|ACH83344.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519151|gb|ACK79737.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 346 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 72/132 (54%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 RS +G+ + + EG+ +G AY +AG+ V TA+++ IP GA A +++L Sbjct: 205 RSVLIGLIGVGVVEGMFIGIAYAVAGLGMWPLWLVATALISPIPFGATAVVGAATLWLAF 264 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ F + +WG I + D +RP L G + PF FF ++GG GL+GL IG Sbjct: 265 TGHWFAGLLVLIWGLIVITAADLVVRPLLTGSQTQAPFFLVFFSILGGAEAFGLIGLIIG 324 Query: 332 PVLMALIAVIWK 343 P+L+ L +W+ Sbjct: 325 PILVLLARGVWR 336 >gi|254712287|ref|ZP_05174098.1| hypothetical protein BcetM6_02689 [Brucella ceti M644/93/1] gi|254715358|ref|ZP_05177169.1| hypothetical protein BcetM_02704 [Brucella ceti M13/05/1] Length = 352 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAVFGSLVDEG 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 86 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 140 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 197 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 257 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 317 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|163785444|ref|ZP_02180051.1| hypothetical protein HG1285_05465 [Hydrogenivirga sp. 128-5-R1-1] gi|159879288|gb|EDP73185.1| hypothetical protein HG1285_05465 [Hydrogenivirga sp. 128-5-R1-1] Length = 286 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 15/229 (6%) Query: 120 SELWTKHLSHPQSL--KILSETFLKTNGIDFIPRF-ASRFGMIFLDY---CLSIIFMIIA 173 S L K +S+ Q+L K+ + FLKT I ++ F S+ IF+D+ L II MII Sbjct: 49 SYLHEKIISYLQTLNIKVDIQDFLKT-AISYVVNFLISKGRTIFIDFSFIVLGIILMIIT 107 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP---KVIRSTFLGMTIIAIGEGLVLG 230 +FF ++DG + L P K+ + I I+ LG + AI +G++ Sbjct: 108 IFFLFKDG----KNFYIWIYKLIPMEEKEKNYIAVSSYNTIQGIVLGSFLTAIAQGILSF 163 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y+ +GV + +IT A IP GGA + + +++YL + L+G + Sbjct: 164 IGYYFSGVGFSLFWAIITFFSAFIPIGGASLIWVPIAVYLFFTKGLIVGILFSLYGTFII 223 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 VD ++P ++GG + L F + GG+ G +G+FI P+++ +I Sbjct: 224 STVDNIIKPIVIGGKANIHPLIMIFAIFGGLNLFGFVGVFIAPIIVVII 272 >gi|261217086|ref|ZP_05931367.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261319956|ref|ZP_05959153.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260922175|gb|EEX88743.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292646|gb|EEX96142.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 354 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 28 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAVFGSLVDEG 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 88 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 142 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 198 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 199 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 258 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LRP LVG ++P VGG+ Sbjct: 259 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGIS 318 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 319 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 349 >gi|91775579|ref|YP_545335.1| hypothetical protein Mfla_1226 [Methylobacillus flagellatus KT] gi|91709566|gb|ABE49494.1| protein of unknown function UPF0118 [Methylobacillus flagellatus KT] Length = 352 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 145/342 (42%), Gaps = 26/342 (7%) Query: 16 IMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + ++LVS + L F+ V +I+ P+Y + LA + T+S C Sbjct: 12 VFLLLLVSAGLIIILLPFYGAVFWGVILSILFTPLYRRLLVTTRNRKN-LAALGTLSA-C 69 Query: 73 LFIVPLLFLFYYGML--EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + IV + + L E L K+ + + + D L LS Sbjct: 70 IIIVIVPVIIIASSLVHEGTMLFQKIKTGQINPALYTQQILDATPAPVHRILERVGLSDV 129 Query: 131 QSLK-ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 QS + LS+ L G + A G + + M+ +FF RDG S+S ++ Sbjct: 130 QSFQEKLSQ--LAMEGSQLLATKALSIGQNTFQFVVGFAVMLYLMFFLLRDGSSLSIRVK 187 Query: 190 SL-------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 HLF + VIR+T G ++AI +G + G +W+ G+ + + Sbjct: 188 QAIPLSAEHKRHLFNKF--------TTVIRATVKGNILVAITQGALGGLIFWILGIQAAL 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 VI A ++++P GA + + V++Y L G I+ L +G + +VD LRP LV Sbjct: 240 LWAVIMAFLSLLPAVGASLIWAPVAVYFLATGAIWQGVILIAFGVFVIGLVDNILRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G KLP +GG+ GL G IGP++ AL +W Sbjct: 300 GKDTKLPDYVVLISTLGGMAVFGLNGFVIGPLIAALFITMWD 341 >gi|255022092|ref|ZP_05294096.1| protein of unknown function UPF0118 [Acidithiobacillus caldus ATCC 51756] gi|254968450|gb|EET26008.1| protein of unknown function UPF0118 [Acidithiobacillus caldus ATCC 51756] Length = 343 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 75/136 (55%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + RS +G+ + + EG+++G A+ +AG+ V TA+++ IP GA A +++ Sbjct: 199 EAARSVLIGLIGVGVIEGILIGIAFAVAGLKMWPLWLVATALISPIPFGATTVVGAATLW 258 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ +F WG + + + D +RP L G + PF FF ++GG + GL+GL Sbjct: 259 LAFSGHWLVGLIIFAWGLVVITVADLVIRPLLTGSQTRAPFFLVFFSILGGAQAFGLIGL 318 Query: 329 FIGPVLMALIAVIWKE 344 IGP+L+ + IW+ Sbjct: 319 IIGPILVLMARGIWRS 334 >gi|54307733|ref|YP_128753.1| putative permease [Photobacterium profundum SS9] gi|46912156|emb|CAG18951.1| putative permease [Photobacterium profundum SS9] Length = 361 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 164/358 (45%), Gaps = 50/358 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 WM++ + +++Y ++ + P++ A II +P+++ SK A+++ + Sbjct: 11 HWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLHARIESKISNKPNSAAILSCI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++PLL +F +V + ++ W S GG A EL L+ Sbjct: 71 LLTFIIVIPLLIVF-------SSIVHQGTTFSKDSY---TWFSS--GG--AKEL----LA 112 Query: 129 HP--QSLKILSETFLKTNGIDF------IPRFASRFGMIFLD-----------YCLSIIF 169 HP Q + +L E + GID I AS+FG L+ + +S + Sbjct: 113 HPYVQKVLLLIEKWSPFEGIDTQAILQKIASAASKFGAQLLNISAKILGDATNFVISFML 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEG 226 M+ LFF RD ++ + H+ P + + V +V +S LG + A+ +G Sbjct: 173 MLFVLFFLLRD----HTKMVNAVRHVLPLSRSQEDVLLTEVEQVAKSAVLGSFLTALAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G A WLAG P + G + A + IP G + + ++YLL+ A L WG Sbjct: 229 FAGGFAMWLAGFPG-LFWGSMMAFASFIPVFGTALIWLPATLYLLLINQWEWALFLSGWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I + +D LRP L+ G + L FF ++GG+ GL+GL GP++ A+ V++K Sbjct: 288 IIVVGSIDNILRPLLMQGNSGMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFK 345 >gi|297580751|ref|ZP_06942677.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535167|gb|EFH74002.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 361 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIIQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|304415417|ref|ZP_07396069.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] gi|304282733|gb|EFL91244.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] Length = 353 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 155/327 (47%), Gaps = 14/327 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +++ S ++ F + A+++ T+WP+ ++ T+ ++ F+ Sbjct: 21 ILTMMITSFLVIQPFIIGLTWAVMVVITTWPLLIKLQIVLWGRRVLAVIVMTLLLILFFV 80 Query: 76 VPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQS 132 +P+ L ++ LV+ AN H P WL+ IP + S+++ +L + Sbjct: 81 IPIALLVNSLLINSAPLVAWASSPANMH-FPEMEWLNAIP--LIGSKIYNSWHNLVEGGA 137 Query: 133 LKILSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++L++ ++ F+ + A+ G + L ++F ++ FY G ++Q + Sbjct: 138 NELLAKLRPYVGEATTWFVAQ-AAHLGRFVVHLALMVLFSVL----FYFHGERVAQGIRR 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + IR+ LG+ + A+ + ++ G A +AG+P L V+ I Sbjct: 193 FAVRLADEKGDSVIVLAAQSIRAVALGLVVTALIQAVLGGIALAMAGIPYATLLTVLMFI 252 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ G + I+L G+ + L +W I L D LRP L+ LP + Sbjct: 253 LCVVQLGPLLVLIPAIIWLYWSGDTTWGSILLVWSGI-LGTFDAVLRPALIRRGADLPMI 311 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMAL 337 FG++GG+ ++G++GLFIGPV++A+ Sbjct: 312 LILFGVIGGLLSLGMIGLFIGPVVLAV 338 >gi|304395632|ref|ZP_07377515.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304356926|gb|EFM21290.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 412 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 23/342 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L +F+ +L A I+ P+ +++ + +A + T+ +CL + L + + Sbjct: 26 LSPYFSSILWAAILAVIFHPL-KTWLRNRLGDRNGVAALITLLCICLIVFTPLAIIASSL 84 Query: 87 LEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + V + N PV L +P W KH +L + K + Sbjct: 85 VVETNAVYHKLQTNSSQFPVVFADLLQHLP-------RWAKHFLAENNLDNAGQIQQKLS 137 Query: 145 -----GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 G ++ A G + + M+ LFF +DG S + + E L + Sbjct: 138 SFALKGGQYVAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDG---SYLVHLILEALPLST 194 Query: 200 WKKISRIV--PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 + K +V V R+T G ++ I +G++ G A+W G+ + G + A +++IP Sbjct: 195 YVKHHLMVKFAAVARATVKGTVVVGIVQGILGGLAFWFTGIDGSLLWGALMAFLSLIPAV 254 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G+ I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 255 GSAIIWVPAAIFFFATGALWKGLFLVGFFVVIVGLVDNILRPLLVGKDTKMPDYMILIAT 314 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GG+ G+ G IGPV+ AL W ++++ ++N+E I + Sbjct: 315 LGGMEIYGINGFVIGPVIAALFIACW--NLLSGRDNRENIEA 354 >gi|262191799|ref|ZP_06049971.1| hypothetical protein VIH_002174 [Vibrio cholerae CT 5369-93] gi|262032333|gb|EEY50899.1| hypothetical protein VIH_002174 [Vibrio cholerae CT 5369-93] Length = 361 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|229530430|ref|ZP_04419818.1| hypothetical protein VCG_003550 [Vibrio cholerae 12129(1)] gi|229332203|gb|EEN97691.1| hypothetical protein VCG_003550 [Vibrio cholerae 12129(1)] gi|327483427|gb|AEA77834.1| Predicted permease [Vibrio cholerae LMA3894-4] Length = 361 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD +I + H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRDHDTIISAI----RHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|121587957|ref|ZP_01677711.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121728275|ref|ZP_01681307.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673733|ref|YP_001216117.1| putative lipoprotein [Vibrio cholerae O395] gi|153801764|ref|ZP_01956350.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818917|ref|ZP_01971584.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|153822992|ref|ZP_01975659.1| lipoprotein, putative [Vibrio cholerae B33] gi|153825679|ref|ZP_01978346.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|227080805|ref|YP_002809356.1| hypothetical protein VCM66_0582 [Vibrio cholerae M66-2] gi|229505753|ref|ZP_04395263.1| hypothetical protein VCF_000964 [Vibrio cholerae BX 330286] gi|229509213|ref|ZP_04398698.1| hypothetical protein VCE_000613 [Vibrio cholerae B33] gi|229519577|ref|ZP_04409020.1| hypothetical protein VCC_003609 [Vibrio cholerae RC9] gi|229520915|ref|ZP_04410337.1| hypothetical protein VIF_001439 [Vibrio cholerae TM 11079-80] gi|229608864|ref|YP_002879512.1| hypothetical protein VCD_003786 [Vibrio cholerae MJ-1236] gi|254291239|ref|ZP_04962034.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254850857|ref|ZP_05240207.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744158|ref|ZP_05418111.1| predicted permease [Vibrio cholera CIRS 101] gi|262155732|ref|ZP_06028856.1| predicted permease [Vibrio cholerae INDRE 91/1] gi|262169926|ref|ZP_06037616.1| predicted permease [Vibrio cholerae RC27] gi|298500741|ref|ZP_07010544.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121547804|gb|EAX57892.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121629469|gb|EAX61896.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124122729|gb|EAY41472.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126510534|gb|EAZ73128.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|126519499|gb|EAZ76722.1| lipoprotein, putative [Vibrio cholerae B33] gi|146315616|gb|ABQ20155.1| putative lipoprotein [Vibrio cholerae O395] gi|149740616|gb|EDM54725.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|150422803|gb|EDN14755.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227008693|gb|ACP04905.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227012449|gb|ACP08659.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229342148|gb|EEO07144.1| hypothetical protein VIF_001439 [Vibrio cholerae TM 11079-80] gi|229344266|gb|EEO09241.1| hypothetical protein VCC_003609 [Vibrio cholerae RC9] gi|229353785|gb|EEO18721.1| hypothetical protein VCE_000613 [Vibrio cholerae B33] gi|229357976|gb|EEO22893.1| hypothetical protein VCF_000964 [Vibrio cholerae BX 330286] gi|229371519|gb|ACQ61942.1| hypothetical protein VCD_003786 [Vibrio cholerae MJ-1236] gi|254846562|gb|EET24976.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738098|gb|EET93490.1| predicted permease [Vibrio cholera CIRS 101] gi|262021660|gb|EEY40371.1| predicted permease [Vibrio cholerae RC27] gi|262030443|gb|EEY49083.1| predicted permease [Vibrio cholerae INDRE 91/1] gi|297540522|gb|EFH76580.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 361 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|27365038|ref|NP_760566.1| putative permease [Vibrio vulnificus CMCP6] gi|27361184|gb|AAO10093.1| Predicted permease [Vibrio vulnificus CMCP6] Length = 361 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 51/353 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F SK + ++++ V + + +VPLLF+F Sbjct: 32 YINSIIMAFIISLLMFPIHDWFESKMPKHRNMASLLSCVVLTFIIVVPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP---QSLKILSETFLKTNGI 146 +V + + +Q+ +W++ GG+ + L HP + LK+++E +L + I Sbjct: 85 AAIVQQGSVFSQN---TYQWVTH--GGI------QQVLGHPWIVKGLKLVNE-YLPFDNI 132 Query: 147 DF------IPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLD 189 D I + A+ FG + ++ + M+ LFF RD ++ Sbjct: 133 DAKSIAEKIGQLATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKII 188 Query: 190 SLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S H+ P + K+ + V +S +G + AI +G+ G WLAG P + G Sbjct: 189 SAIRHILPLSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + +IYL + G+ A L +W + +D LRPFL+ G Sbjct: 248 MMGFASFIPVVGTALIWIPATIYLFLTGDTGWAIFLAIWSIAIVGSIDNLLRPFLMQGSG 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG++ GL+GL GP++ A+ V I++E + ++ Sbjct: 308 GMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLDQQDN 360 >gi|328954356|ref|YP_004371690.1| protein of unknown function UPF0118 [Desulfobacca acetoxidans DSM 11109] gi|328454680|gb|AEB10509.1| protein of unknown function UPF0118 [Desulfobacca acetoxidans DSM 11109] Length = 409 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 130/237 (54%), Gaps = 13/237 (5%) Query: 121 ELWTKHLSHPQSLKILS-ETFLKT---NGIDFIPRFASRFGMI--FLDYCLSIIFMIIAL 174 E + KHL+ P +L+ L E ++T + FI + + G++ F + S++ ++ Sbjct: 148 EDYAKHLNLPVNLENLKIEEVIRTALISASQFI--YNNSIGLVKGFTTFLFSLLLILFIT 205 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF + +G ++ L L A+ +I V IR+T G I+AI +G++ G ++ Sbjct: 206 FFCFLEGDDFIDEIKRLSP-LDQAHNDEILGDVENTIRATIRGTVIVAIIQGILGGLGFF 264 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GVP G + ++IP GA I + +++L +G+I+ + + LWG + + +D Sbjct: 265 CFGVPRAAFWGTVMIPASVIPVIGAAIIWLPAALFLFFQGHIWQSLGMVLWGGVFIGSID 324 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA-LIAV--IWKESIM 347 ++P+L+ G + P + T F ++GG+ G++G +GP++++ L++V I++++I+ Sbjct: 325 NLVKPYLMKGARQTPTIFTLFAIMGGITYFGMIGFILGPLILSFLLSVLEIYRKTIL 381 >gi|85375175|ref|YP_459237.1| hypothetical protein ELI_11740 [Erythrobacter litoralis HTCC2594] gi|84788258|gb|ABC64440.1| hypothetical protein ELI_11740 [Erythrobacter litoralis HTCC2594] Length = 360 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 17/336 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P+L + + P+Y + + A+ +++ +F LL + + G + Sbjct: 34 FVMPILWSALAAILFQPLYQRILGNLNGKANQAAI---ATLLIIFFAVLLPMIWIGSAIV 90 Query: 90 KELVSKVVLANQHG-IPVPRWLSDI----PGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ + VV+A Q G I V + I P + + L + L+ ++ L T Sbjct: 91 RQ-AANVVIAFQEGRIDVATLVGQIFDALPSNL-RNMLDAQGWGDFADLQARTQELL-TQ 147 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + A G L Y L+ + +F RDG I Q + G L ++++ Sbjct: 148 SAGLIAQQALVIGGGALGYVLAFGVGLYITYFLLRDGKGIGQAVME-GVPLQKDVAERLA 206 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 ++R+T G ++ I +G + +W+ G+PS + G++ A+ +++P G I + Sbjct: 207 DKFLNIVRATIKGSVVVGIVQGALGALTFWIVGLPSVLLFGLVMAVFSLLPAIGPAIVWV 266 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I+L G I+ + + G + + D LRP LVG +P +GG+ TM Sbjct: 267 PAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLRPILVGRDTGIPDWIILVTTLGGIATM 326 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL G+ +GP+L L W ++E+ E + +N Sbjct: 327 GLSGIVLGPMLAGLFLAGWT----ILREHNEAVDAN 358 >gi|229512886|ref|ZP_04402353.1| hypothetical protein VCB_000528 [Vibrio cholerae TMA 21] gi|229350135|gb|EEO15088.1| hypothetical protein VCB_000528 [Vibrio cholerae TMA 21] Length = 361 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIESVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|167584523|ref|ZP_02376911.1| hypothetical protein BuboB_04261 [Burkholderia ubonensis Bu] Length = 260 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 17/214 (7%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F S + E T +A + T +V L ++P+ Sbjct: 56 WVIRAFIPAIAWACVIAIALWPLLKRFESHRLFRERPTVVATVITAAVSLLVVLPVAIAL 115 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK-----IL 136 + + EL + +GIPVP ++ +P G + W HL HP + + Sbjct: 116 IQAIGQAHELREWLRTVQDNGIPVPDVVARLPVGAPQVAAWWQAHLGHPLHAEAAMKGVN 175 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 SETFL F FG L FM++ LF R G +S L + F Sbjct: 176 SETFLA---------FGRHFGSKLAHAVLEFGFMLVTLFVILRAGHKLSGALLQGVQRAF 226 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ + + T G+ ++ +GEG +LG Sbjct: 227 GGNGAQLIERMAAAVHGTVTGLVVVGLGEGALLG 260 >gi|153829135|ref|ZP_01981802.1| putative lipoprotein [Vibrio cholerae 623-39] gi|148875393|gb|EDL73528.1| putative lipoprotein [Vibrio cholerae 623-39] Length = 361 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|149174467|ref|ZP_01853093.1| hypothetical membrane spanning protein [Planctomyces maris DSM 8797] gi|148846577|gb|EDL60914.1| hypothetical membrane spanning protein [Planctomyces maris DSM 8797] Length = 443 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/344 (24%), Positives = 154/344 (44%), Gaps = 31/344 (9%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P+ A ++ S P+ + FI + F A + T ++ ++PL + G L++ Sbjct: 28 FILPLFLAAVVAMISQPLLNYFIRRTNGHVRFAAGLTTTIIVSAILIPLCVGIFLGSLQL 87 Query: 90 -KELVSKVVLAN-QHGIPVPRWLSDIPGGM------WASELWTKHL-----SHPQSLKIL 136 +V+ + AN + R +I W+ E + S + Sbjct: 88 FTTIVNTLDEANWNKTVQTIREKVEISNDKFQQFVDWSHEYLQYDIDSLVTSGKSGEPKI 147 Query: 137 SETFLKTNGIDFIPRFASR-----------FGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 SE F++ N + A R G +F ++ I IIAL++F DG+ + Sbjct: 148 SEDFIRKNLQATLVPIAKRSLGVAASTVGLLGTLF-SALIAWIMFIIALYYFLADGYLLI 206 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL + Y +++ KV+R+ + + AIG+GL A + G + Sbjct: 207 ESTQSLIP-VHVDYQRRLIDQFQKVVRAVVIATFLAAIGQGLTTAIALSIVGFDHFIVFL 265 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I +M+P G+ + + +I+L+ +G+ +A L L G + + +D +R +++ Sbjct: 266 ILATITSMVPLLGSWLIWLPCAIWLMYQGDWGSAIFLILIGTLVVGTMDNIIRTYVLQSD 325 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPV----LMALIAVIWKE 344 KL L F ++GG++ MGL G+FIGP+ L ALI + E Sbjct: 326 AKLHPLLAFVSVLGGLQVMGLWGVFIGPIVASCLHALIQIFNTE 369 >gi|91782652|ref|YP_557858.1| hypothetical protein Bxe_A3174 [Burkholderia xenovorans LB400] gi|91686606|gb|ABE29806.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 371 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 159/339 (46%), Gaps = 11/339 (3%) Query: 5 MLNPQGIMRWMIMF--IILV--SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q I R +F IILV SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWA 119 + A + + ++ + + P ++ + + ++V+ V + G+P +P W++ IP + Sbjct: 61 WAATLIVLIILIVVLGPFVYAGFAFGARVHDIVALVQRLFEAGLPDLPPWVARIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL-FFFY 178 E + + L+ S I L +I A I + + L ++ + I L FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAA-----IAVTHGLGLLALSIVLAFFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + L++ + + + ++ G+ A+ +G++ G W+AGV Sbjct: 176 TGGEGAAAWLNAGMRRVAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 236 PAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+G +P + G++GG G LG+FIGP L+A+ Sbjct: 296 ILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAV 334 >gi|307826374|ref|ZP_07656577.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307732582|gb|EFO03456.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 350 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/345 (20%), Positives = 145/345 (42%), Gaps = 35/345 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF---- 82 +K F A+I+ P+Y + S + + ++ +F++PLL + Sbjct: 25 IKDFLLACFWAIILAVVFDPVYQRIRQYFKNSEILPLFLTMMMIILVFVIPLLTIILMIT 84 Query: 83 -----YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI-- 135 YY + E+ +V + + +P++ LSH Q++ + Sbjct: 85 EESTGYYQKIASGEINPQVYFQDILALVLPKF---------------YKLSHIQAISVEQ 129 Query: 136 --LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL-- 191 S T + +I + L+ + + LFF RDG + ++L SL Sbjct: 130 ISASAGNAFTQAVKYIAQQLPALTQNLLNLIVQVALAFYILFFLLRDGQQLIRKLISLIP 189 Query: 192 -GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 G+ + +++ + V R+T G I+A+ +G + G +W G+P+ G++ + Sbjct: 190 IGDGIEIELFERFT----SVARATVKGGLIVAVIQGSIGGFLFWFVGIPAAFLWGILMIV 245 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++++P G+ + + +I L ++G A + G + + ++D LRP L+G K+ Sbjct: 246 LSLLPIGSTLIWVPAAIILFLQGQTLKAAIVLAIGILVIGMIDNFLRPRLIGKDSKMSDY 305 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GG+ L G +GP++ AL W + +K K Sbjct: 306 LVLVSTLGGLTWFSLTGFVLGPIIAALFITCWDLMGQESQASKRK 350 >gi|254226734|ref|ZP_04920310.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125620751|gb|EAZ49109.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 361 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGIWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|153217441|ref|ZP_01951183.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124113554|gb|EAY32374.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 361 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 153/347 (44%), Gaps = 21/347 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPV---PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +F +++ S+ + A Q GI W+ + G A+ PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQTLFNHPWV--VKGLSLANHYLPFEEISPQQIAQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F T G + + A G + + M+ LFF RD ++ S H+ Sbjct: 140 RIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRHI 194 Query: 196 FPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ + V +S +G + AI +G+ G WLAG P + G + + Sbjct: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFAS 253 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 254 FIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLM 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + +++ Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRNFLDQQDR 360 >gi|108757825|ref|YP_632271.1| hypothetical protein MXAN_4093 [Myxococcus xanthus DK 1622] gi|108461705|gb|ABF86890.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 385 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/325 (23%), Positives = 150/325 (46%), Gaps = 28/325 (8%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV--SKVVLANQHG 103 P+ S K + A ++TV+V L + PL + + E+ + V ++V+L QH Sbjct: 46 PVQDSLCQKLGGRKSLSAGVSTVTVFVLILAPLALVGWMVAREVFQFVGQAQVLLEQQH- 104 Query: 104 IPVPRWLSDIPGGMWASELWTK-HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + P +L+ +P G+ E + + + ++ + L T G + A+ D Sbjct: 105 LRHP-FLASLPLGL---ERYLRLGVDSAETERALLAAM--TGGASLLRDVAA----AGTD 154 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQ---LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 +++ M +A+++F+ DG + + L L F A+ ++ + + +I G T Sbjct: 155 LVINLFLMSVAMYYFFLDGRRLVAEVMRLIPLDRRYFEAFAREFTDVAYAII----YGNT 210 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 + A+ +G V +AGVP G ++A++P GG + + + + L+ + Sbjct: 211 VTALIQGAVGFVGLLIAGVPHAGVWGAAMVLVALVPVGGTALVWGPIGVVLIAANQVSEG 270 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP----VL 334 L WGA + +D +RP L G + L L F + GG+ G++GL +GP + Sbjct: 271 VFLLAWGAFLVGSIDNVIRPRLCGSRMALHPLLVFLSMFGGLAVFGMMGLLVGPLIASIF 330 Query: 335 MALIAVIWKESIMAIKENKEKISSN 359 MA++ I++ + I E +S++ Sbjct: 331 MAMVR-IYRRDFLGIGR-AEHLSAH 353 >gi|187927640|ref|YP_001898127.1| hypothetical protein Rpic_0540 [Ralstonia pickettii 12J] gi|187724530|gb|ACD25695.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] Length = 349 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/350 (22%), Positives = 159/350 (45%), Gaps = 22/350 (6%) Query: 14 WMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++++F + + L + L FF V +I+ P+ + +++ + A++ ++ Sbjct: 12 YLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNLAALVTLALIIL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I+P++F+ + E+ ++ A + R+LS+ + A W + L Sbjct: 72 IVILPVIFVAATIVQEIGVAYQEIQSAQPN---YSRYLSE---AVHALPTWVQQLLAKAG 125 Query: 133 LKILSETFLK-TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L ++ K +G I +FA+ G + + M+ +FF RDG I ++ Sbjct: 126 LTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDGTEIGRR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + P + ++ K V+R+T G +A+ +G + G +W+ G+ V Sbjct: 186 V----RRALPMDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVLW 241 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + A ++++P GA + + V++Y L+ G I+ L + + +VD LRP LVG Sbjct: 242 GALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGK 301 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 K+P +GG+ G+ G IGP++ AL W I A +N+ Sbjct: 302 DTKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASW--DIFARGQNE 349 >gi|192360560|ref|YP_001981648.1| hypothetical protein CJA_1152 [Cellvibrio japonicus Ueda107] gi|190686725|gb|ACE84403.1| putative membrane protein [Cellvibrio japonicus Ueda107] Length = 387 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 40/357 (11%) Query: 6 LNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +N + R ++F++ VS+ F L+ FF + A I +P++ + + Sbjct: 1 MNKKLETRTFLLFLLAVSIAFILVLRPFFGTIFWACAITIIFYPLHLRLVELTRGRTNTS 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ V+ + + ++P +FL + E K+ Q G +I + +L Sbjct: 61 ALLTLVACILIVVLPAIFLISSVVREGAVFYGKL----QSG--------EINPAQYIEQL 108 Query: 123 WTKHLSHPQSLKILSETF--LKTNGIDF-------IPRFASRFGMIFLDYCLSIIFMIIA 173 T + Q+L+ L LK N +D I + G L+I M+ Sbjct: 109 RTAFPAVQQALEHLEIDIDNLKKNALDLGMSSGKLIAQHLLNAGQNTFILLLNICLMLYL 168 Query: 174 LFFFYRDGFSISQQL-------DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 FF RDG + + L D+ LF + + V R+T G +IA+ +G Sbjct: 169 TFFLLRDGPQLLELLIRALPLGDARERLLFAKFGE--------VTRATIKGNLVIAVIQG 220 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWG 285 + G +W+ G+P + GV+ AI+++IP P + + V+IYL G+ L +G Sbjct: 221 SLGGLIFWVLGIPGALLWGVVMAILSLIPAVGPALIWLPVAIYLFATGDFTKGAILVAFG 280 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++D LRP LVG KLP +GG+ G+ G IGP++ AL W Sbjct: 281 GGVIGLIDNILRPILVGRDTKLPDYIVLLSTLGGLGLFGVNGFIIGPLVAALFMAFW 337 >gi|188996846|ref|YP_001931097.1| protein of unknown function UPF0118 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931913|gb|ACD66543.1| protein of unknown function UPF0118 [Sulfurihydrogenibium sp. YO3AOP1] Length = 355 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 44/316 (13%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 +PI+ ISK ++S ++I+T ++ ++P + ++ E+ EL + + Sbjct: 46 YPIHQK-ISKIVKNSVLNSLISTFIILTTLLLPFSLILFFLTKEIIELYPLIADYITNPN 104 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK---TNGIDFIPRFASRFGMIFL 161 + L + P + +L+ K L E +L +N D I + +F + Sbjct: 105 LIVEKLKESP---YLYKLYLK----------LQEFYLNKLDSNFHDSIINYLKQFTAVMF 151 Query: 162 DYCLSIIFMII-----------ALFFFYRDGFSISQQLDSL-------GEHLFPAYWKKI 203 ++ + + +I +FF ++DG+ + + S+ ++LF + + Sbjct: 152 NFAKTFLSNVILIFIAIFIMAITIFFLFKDGYKLYNLVYSIIPLEKEEKDYLFSNSYAAV 211 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 ++ LG +AI + + + +A V + L +T A IP GGA + + Sbjct: 212 QAVI--------LGSVFVAIAQAIASLIGFLVADVEYSLVLTFLTFFAAFIPFGGASLVW 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+IYL++ + ++G + VD +RP +VG I + + FF ++GG+ T Sbjct: 264 VPVAIYLMVSKGLLVGILFAVYGTFVISTVDNIIRPIVVGTKIDMHPMIMFFAIIGGLST 323 Query: 323 MGLLGLFIGPVLMALI 338 G LG+FI PV++ALI Sbjct: 324 FGFLGIFIAPVIVALI 339 >gi|227819963|ref|YP_002823934.1| hypothetical protein NGR_b17300 [Sinorhizobium fredii NGR234] gi|227338962|gb|ACP23181.1| hypothetical protein NGR_b17300 [Sinorhizobium fredii NGR234] Length = 365 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +F R + +D L+ F LF+F RDG + L+ L ++ FP ++ R+ Sbjct: 156 NFSASLVRRSVVQIIDVVLTFYF----LFYFLRDG---REALNVLKDY-FPLRSSEMDRL 207 Query: 207 ---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 V + + + G +AI +G + G +WL G+PS + G+ ++AM+P GA I + Sbjct: 208 FFRVSETVHAIVFGTFAVAIVQGTLGGLMFWLLGLPSPLLWGLAMGLLAMVPVLGAFIIW 267 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + G A L WGA + VD L P VG +KL + TF ++GGV Sbjct: 268 IPAALSLALTGEWGKALILTAWGAGVVATVDNLLYPIFVGDRLKLHTVVTFMSMIGGVIV 327 Query: 323 MGLLGLFIGPV 333 G GL IGPV Sbjct: 328 FGPAGLVIGPV 338 >gi|156935110|ref|YP_001439026.1| hypothetical protein ESA_02961 [Cronobacter sakazakii ATCC BAA-894] gi|156533364|gb|ABU78190.1| hypothetical protein ESA_02961 [Cronobacter sakazakii ATCC BAA-894] Length = 362 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 35/357 (9%) Query: 6 LNPQGIMR-WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N + + R + I+ + +VS+ F +K + + VL A+I+ +PI + Sbjct: 1 MNSKEMSRAFFILILFIVSILFFNLVKPYLSAVLWAVILAVIFYPIKRRLCHMMNGRNN- 59 Query: 62 LAVIATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIP-----VPRWLSDIPG 115 +A + TV ++CL + VPL + + E + S V AN +P V R L D Sbjct: 60 IASLLTVVLICLLVFVPLAVVASSLVSEFNAVYSDV-QANNTTLPTLLADVVRILPD--- 115 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF--GMIFL--DYCLSIIF-- 169 W + + L + K +G+ S++ G IFL S++ Sbjct: 116 -------WAQRMLAENQLDNAAAIQQKISGVALK---GSQYVAGSIFLISRNTFSVVIGF 165 Query: 170 --MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 M+ LFF +DG + + S L +++ R V R+T G ++A+ +G+ Sbjct: 166 GIMLYLLFFLLKDGSRLVSVVLS-AVPLSDKVKQRLFRRFAAVARATVKGTVVVAVVQGI 224 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G A++ AG+ + + G + A ++++P GA + + IYL G I A L + Sbjct: 225 LGGVAFYFAGIGASILWGSLMAFLSLVPAVGAALIWVPAVIYLFTTGAIIKAVLLTAFFV 284 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + D LRP LVG I++P +GG+ G+ G +GP++ AL W Sbjct: 285 VVVGLADNLLRPLLVGKDIRMPDWLILLSTLGGLEVYGINGFVVGPLIAALFVTCWN 341 >gi|36958669|gb|AAQ87137.1| Hypothetical protein RNGR00112 [Sinorhizobium fredii NGR234] Length = 355 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +F R + +D L+ F LF+F RDG + L+ L ++ FP ++ R+ Sbjct: 146 NFSASLVRRSVVQIIDVVLTFYF----LFYFLRDG---REALNVLKDY-FPLRSSEMDRL 197 Query: 207 ---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 V + + + G +AI +G + G +WL G+PS + G+ ++AM+P GA I + Sbjct: 198 FFRVSETVHAIVFGTFAVAIVQGTLGGLMFWLLGLPSPLLWGLAMGLLAMVPVLGAFIIW 257 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + G A L WGA + VD L P VG +KL + TF ++GGV Sbjct: 258 IPAALSLALTGEWGKALILTAWGAGVVATVDNLLYPIFVGDRLKLHTVVTFMSMIGGVIV 317 Query: 323 MGLLGLFIGPV 333 G GL IGPV Sbjct: 318 FGPAGLVIGPV 328 >gi|54302864|ref|YP_132857.1| hipothetical membrane protein [Photobacterium profundum SS9] gi|46916288|emb|CAG23057.1| hipothetical membrane protein [Photobacterium profundum SS9] Length = 365 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 89/364 (24%), Positives = 167/364 (45%), Gaps = 34/364 (9%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLA 63 + +R ++FI+L Y +K F PVL II P+ + K+ S+T +A Sbjct: 21 ESAIRVGLLFILLAWSYGIVKPFLIPVLWGAIIAVALMPLTVKLENMLKGKRGLSATVIA 80 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASE 121 I + + IVP + +F M+E E ++ + + IP P +++IP G + Sbjct: 81 FIG----ILILIVPFV-MFSISMVESVEGITSTISSGTLKIPGPTERIANIPIIGQQIFD 135 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFF-- 176 +W ++ L + F K F+P+ S M + + +SI+ +I+L Sbjct: 136 VWQLFSTN------LEKAFTK-----FLPQLTSGLAMMASVIGNSIVSILMFVISLLISA 184 Query: 177 -FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + SIS+ +++L + A+ ++ + + IRS LG+ +A + ++G + Sbjct: 185 AFMANATSISKSVNTLSVRIAGAHGEEWATLCTATIRSVLLGVVGVACIQAFLVGIGVFA 244 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P+ + ++ ++A+ A + V Y+ + AT +W + + D Sbjct: 245 IGLPTAGLITILVLVLAIAQLPALLVVAPVIAYVYSIHDSTTATIFAVWTLLA-GLSDNF 303 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+P L+G + +P G +GG+ + G+LGLFIGPV++A IW + EK Sbjct: 304 LKPLLMGRGLDIPMPVILLGAIGGMVSSGILGLFIGPVILA----IWYQLFNEWMHESEK 359 Query: 356 ISSN 359 S Sbjct: 360 ADSQ 363 >gi|226943233|ref|YP_002798306.1| hypothetical protein Avin_11000 [Azotobacter vinelandii DJ] gi|226718160|gb|ACO77331.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 346 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G + A G + L M+ LFFF RDG ++ ++ P K Sbjct: 142 QGSQLLATKAFNIGQNTFQFILGFFVMLYLLFFFLRDGTALVARI----REAIPLSEMKK 197 Query: 204 SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 SR+ ++ +++T G ++A+ +G + G + L G+P + GV A ++ +P G Sbjct: 198 SRLFQRITGMVQATIKGSLVVAVIQGSLGGVIFALLGIPRALLWGVAMAFLSFLPALGTG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+IY L+ G I + L G + +VD +RP LV +LP +GG Sbjct: 258 LVWAPVAIYFLLSGAILKSVLLTACGIFIIGLVDNIVRPILVSKDTRLPDYLVLVSTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 + GL G IGPV+ AL W Sbjct: 318 LALFGLNGFVIGPVIAALFVSTW 340 >gi|150376865|ref|YP_001313461.1| hypothetical protein Smed_4731 [Sinorhizobium medicae WSM419] gi|150031412|gb|ABR63528.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 359 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 15/191 (7%) Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLG 217 +D L+ F LF+F RDG Q L +L EH P + ++R+ +V + + G Sbjct: 170 IDAVLTFYF----LFYFMRDG---RQVLAALKEH-SPLSEQDMNRLFTRVHETVHAVVFG 221 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A +G + G +WL G+P+ V G+ ++A++P GA I + ++ L + G Sbjct: 222 TVAVAAVQGAMGGLMFWLLGLPAPVVWGLAMGLLAVVPVLGAFIVWLPAALSLALSGEWG 281 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV--- 333 A L WGA + +D L P VG +KL L F ++GG+ G GL IGPV Sbjct: 282 KALILAGWGAGVVATIDNLLYPIFVGDRLKLHTLTAFMSMIGGIIVFGSAGLVIGPVAFT 341 Query: 334 LMALIAVIWKE 344 + L+ IW++ Sbjct: 342 VTLLLLDIWRQ 352 >gi|319945201|ref|ZP_08019463.1| permease [Lautropia mirabilis ATCC 51599] gi|319741771|gb|EFV94196.1| permease [Lautropia mirabilis ATCC 51599] Length = 433 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 160/352 (45%), Gaps = 24/352 (6%) Query: 18 FIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 F+ LVSL FL F++ ++ A+I+ P+ + + + + + I +V+ + Sbjct: 14 FLALVSLAFLAILLPFYSALMWAVILAMLFAPMQRALMRRMPQRANTATFITLGAVIMMV 73 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+P++ L + + ++ S++ + + G + + + +PG W + Q L Sbjct: 74 IIPVIGLTMSLVNQGAQIYSRIRSGDLNFGAYLAKIIEAMPG-------WLHRMLDAQGL 126 Query: 134 KILS--ETFLKTNGID---FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + L +G + F+ A G +D S ++ LFF RDG QL Sbjct: 127 LDLPSIQRRLADSGSEIGQFLASQAVNIGQNTVDALASTGVLLYVLFFLLRDG----GQL 182 Query: 189 DSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ P + + ++ K V+++T G +AI +G++ G W G+ + Sbjct: 183 VAMFYRAIPLEDEPKNHLLGKFSAVVKATVKGNVAVAIVQGVLGGIILWALGIKGVILWS 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ A ++++P G+ + + +++Y L G + L +G + +VD LRP LVG Sbjct: 243 VVMAFLSLLPAVGSGLIWGPIALYFLATGATWQGVVLLAYGVGVIGMVDNVLRPVLVGKN 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 K+P +GG+ GL G IGP++ AL W + ++ E++ Sbjct: 303 TKMPDYVVLVSTIGGMSLFGLNGFVIGPLIAALFMAAWDLYVAPDRDRDEEV 354 >gi|258625580|ref|ZP_05720466.1| putative lipoprotein [Vibrio mimicus VM603] gi|258582133|gb|EEW06996.1| putative lipoprotein [Vibrio mimicus VM603] Length = 361 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 17/345 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K F A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAFLSCVVLTVIIVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQSLKILS 137 +F + + + + HG + S + G A+ PQ + Sbjct: 83 IFGAIVQQGSKFSQNLYAWVTHG-GIQELFSHPWIVKGLSLANHYLPFEEISPQQIAQRI 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 F T G + + A G + ++ M+ LFF RD ++ S H+ P Sbjct: 142 GQFATTFGSNLVSISAKILGDA-TSFVMNFFLMLFVLFFLLRD----HDKIISAIRHILP 196 Query: 198 AYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + R+ + V +S +G + AI +GL G WLAG P + G + + I Sbjct: 197 LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFI 255 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G + + ++YL + G A L +W + + LRPFL+ G + L F Sbjct: 256 PVVGTALIWIPATLYLFLTGETTWAIFLAIWSIAVVGSIYNLLRPFLMQGSAGMNTLMIF 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 F L+GG++ GL+GL GP++ A+ V I++E + ++K Sbjct: 316 FSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDK 360 >gi|323525474|ref|YP_004227627.1| hypothetical protein BC1001_1122 [Burkholderia sp. CCGE1001] gi|323382476|gb|ADX54567.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 372 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 35/337 (10%) Query: 18 FIILV--SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IILV SL L F +L I+ ++SW Y + + A + + ++ + + Sbjct: 17 LIILVGGSLLVLAPFTTALLWGAILSYSSWGFYRRLTAAVGGRRKWAATLIVLIILIVVL 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP------GGMWA------SEL 122 P ++ + + ++V+ V + G+P +P W++ IP W SEL Sbjct: 77 GPFVYAGFAFGAHVHDIVALVQRLFEAGLPDLPPWVARIPVVGSSIESFWETLTSSNSEL 136 Query: 123 WT--KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L+ P ILS T+G+ + LSI+ FFFY Sbjct: 137 IAQLRTLAAPAGKWILSAAIAVTHGLGLL--------------ALSIVLA----FFFYTG 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L++ + + + ++ G+ A+ +G++ G W+AGVP+ Sbjct: 179 GEGAGAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVPA 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG+ T +++IPGG I + +I+L G A L +WG + + + D ++P L Sbjct: 239 PALLGLATFFLSVIPGGPVIVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPIL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +G +P + G++GG G LG+FIGP L+A+ Sbjct: 299 IGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAV 335 >gi|146313035|ref|YP_001178109.1| hypothetical protein Ent638_3398 [Enterobacter sp. 638] gi|145319911|gb|ABP62058.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 360 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 160/348 (45%), Gaps = 30/348 (8%) Query: 8 PQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 PQ + +I+ +L S ++ L F ++ A +I +WP+Y++ K + Sbjct: 11 PQTLFGILIILTLLSSAIWILHPFLLSIVWAGLIVIATWPLYTTVQRKLGGRRKLAITVM 70 Query: 67 TVSVMCLFIVPLLFLFYYGMLEM--KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V + +F++P++F GML ++L+ ++ ++ +P +L+ IP + Sbjct: 71 MVFLTAIFLLPIIF--SAGMLSTLFEDLLQWLMHLDKSHLPSLDFLAHIP-------IVG 121 Query: 125 KHLSHPQSLKILSET------FLK---TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 +HL H + L ++ E LK T I + + S+FG +F++ + M++A Sbjct: 122 EHL-HRKWLALIHENAESIFDTLKPWITKVIVILAQGLSQFGALFVNG----LMMLLACL 176 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 FY G +I++ L + A + I++ +G+ + A+ + + G + Sbjct: 177 AFYLYGTTITRGLRQFAFRIAGARGDNAVLLAGTTIQAVAMGVVLTAVIQSIFAGVGLAV 236 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +PS L I ++ ++ G I I+L +G +N L +W I +D Sbjct: 237 CHIPSSALLTGIIFVLCLMQLGPVIIMLPALIWLFYQGEHWNGAVLLVWTVIA-GSLDNI 295 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+P L+ L G++GG+ T G++GL IGPVL+ AV WK Sbjct: 296 LKPILIKRGADTSLLLIMTGVIGGMLTWGMIGLMIGPVLL---AVSWK 340 >gi|124515995|gb|EAY57504.1| conserved hypothetical protein [Leptospirillum rubarum] Length = 361 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 25/343 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 M +F+ L L +L AP LSAL I+ F PI++ F+ +K + A++ T Sbjct: 23 MALFLCLFGLLYL--IIAPYLSALLWAAILSFAVTPIHA-FLLRKIGRPAWTALLTTFLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-----VLANQHGIPVPRWLSDIP-GGMWASELWT 124 + + PLL L G+ EL+ V L + H VP W++ +P G L T Sbjct: 80 LGFVLAPLLSL---GVPLSHELILAVNGIRTFLEDPHS-KVPDWIARLPLVGSRIDALLT 135 Query: 125 KHLSHPQSLKILSETFLKTNGI---DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +HP L + + L+T+ + D + A+ G + L ++A F F G Sbjct: 136 GLKTHPIGLDVATAK-LQTHILAFGDQVLSLATNLG----KWFLKFFIFLLAFFAFTLHG 190 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +I L L + +++P R G+ A+ + ++ +W AG+P+ Sbjct: 191 ETIWATLSRLFTQWAGNRMEIPLKVIPATTRGVLYGVFFTALFQAILSAIGFWAAGLPNV 250 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L I + A+ P GA + + +YL + + A LW + I++ ++P + Sbjct: 251 LLLTTIAFLAALFPIGAVVVWVPSLLYLAVMHHWIAALIFGLWNLLGGGIIEHFIKPMFI 310 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G +PFL G++GG+ GL+GLFIGPV++++ + K Sbjct: 311 GRSSDIPFLAILLGVMGGLEAFGLIGLFIGPVVLSVTLALLKA 353 >gi|194335494|ref|YP_002017288.1| protein of unknown function UPF0118 [Pelodictyon phaeoclathratiforme BU-1] gi|194307971|gb|ACF42671.1| protein of unknown function UPF0118 [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWL 235 RDG +QL + P +R++ K V R+T G ++ +G + G A Sbjct: 174 RDG----KQLLAHFLSYLPLRQTDQNRLLDKFISVTRATIKGTMVVGAVQGSLAGLALHF 229 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 AG+ S + G I ++ +++P G+ + + IYL G A + L+ +I + +D Sbjct: 230 AGIDSALFWGTIMSLFSILPVLGSALVWVPAVIYLAATGQYPQAIGVLLFCSIVVGQIDN 289 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LRP L+G ++P L FFG +GG+ G+ G +GP++ AL IW+ KE Sbjct: 290 ILRPMLIGRDTQMPELLIFFGTLGGISLFGVFGFILGPIVAALFMTIWEMYGETFKEYLS 349 Query: 355 KISSN 359 +I S+ Sbjct: 350 EIKSD 354 >gi|224824021|ref|ZP_03697129.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] gi|224603440|gb|EEG09615.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] Length = 350 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 3/166 (1%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG + + L + P K+ ++V R+ G + AI +G ++G + +AG+ Sbjct: 177 RDGRQLLNRAVRL-VPMQPQRRSKLLKLVGNTTRAVVYGTGLTAIAQGALVGIGFAIAGL 235 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 PS V GV+ AI+A++P GG + + L+ A + +WGA + + D LR Sbjct: 236 PSAVVFGVLAAILALLPIGGTALVWVPAVGTLVATSQWGWAIFMLIWGA-GVTVSDNLLR 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L+ + L F G++GG+ G++G+ IGPVL+ +IA + + Sbjct: 295 PLLISSQEPVSILVVFVGVIGGLSAFGMIGVIIGPVLLTVIAALLR 340 >gi|239833729|ref|ZP_04682057.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239821792|gb|EEQ93361.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 375 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 11/319 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +++ VL A+I+ P+ A+++ + +CL I+P+L +F + E Sbjct: 46 YYSAVLWAVILAVVFSPVQQRLERLLGGRKNIAALLSVLMCICLVIIPMLAIFGSLVQEG 105 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHL---SHPQSLKILSETFLKTNG 145 L ++ + + ++S I G + S E W + +S ++ + Sbjct: 106 NSLYQRL---SSREFDLNSYISRILGALPDSLEEWLTRFELGDFAEWRSRISSAIMQGSQ 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 163 L-FAGRLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGAELGRKIRQ-AIPLNDDYTRQFLE 219 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 VIR+T G IIAI +G + G +WL GV + + GV+ ++M+P GA + + Sbjct: 220 KFTAVIRATVKGNIIIAIIQGTIGGVTFWLLGVEAALLWGVMMTFLSMLPAVGAALVWIP 279 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G + L G + +VD LRP LVG ++P VGG+ +G Sbjct: 280 AAAWFFASGEWISGAVLIFVGVFVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLIG 339 Query: 325 LLGLFIGPVLMALIAVIWK 343 + G +GP++ A+ W Sbjct: 340 INGFVVGPLIAAMFIAAWS 358 >gi|145300900|ref|YP_001143741.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853672|gb|ABO91993.1| putative permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 362 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 151/329 (45%), Gaps = 23/329 (6%) Query: 19 IILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I+++S + L+ F ++ A +I +WP+ A+ T+ ++ +F++P Sbjct: 20 ILIISCFMVLRPFLPALVWATMITIATWPLMRMVQRLLWGKRMLAALFMTLVLLLMFVIP 79 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPR--WLSDIP-GGMWASELWTKHLSHPQSL- 133 L F+ + E ++ ++ H P P WL IP G E W + L+ + Sbjct: 80 L-FMALANVAEQAPMLIELGTTISHS-PPPELLWLQQIPLVGTKLYEFWQQILASGGQVL 137 Query: 134 -KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L+ F +T ++ A G++F+ + L++ + Y G ++ + Sbjct: 138 FTKLAPYFGQTA--RWLASQAGNLGLLFVHFLLTVGICGV----LYHSGEMVATGIRRFA 191 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AI 250 L + + + IR+ +G+ + A+ + V G +AG+P + L V+ I Sbjct: 192 HRLAGERGDNATVLASQAIRAVAMGVVVTALVQSSVAGIGLLIAGIPYTMVLVVVMFLLI 251 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLP 308 +A I G P+ + YL G+ T L +W LF +D LRPFL+ LP Sbjct: 252 VAQI-GPFPVLLACIG-YLYWSGDTTWGTFLLVW---SLFAGTMDNILRPFLIKRGADLP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + G++GG+ TMG++GLFIGPV++A+ Sbjct: 307 LILILVGVIGGLLTMGIIGLFIGPVVLAV 335 >gi|78063136|ref|YP_373044.1| hypothetical protein Bcep18194_B2289 [Burkholderia sp. 383] gi|77971021|gb|ABB12400.1| protein of unknown function UPF0118 [Burkholderia sp. 383] Length = 353 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/306 (25%), Positives = 139/306 (45%), Gaps = 28/306 (9%) Query: 62 LAVIATVSVMCLFIV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA + T+S++ L ++ PL+F+ + E+ + ++ A + ++ DI + +S Sbjct: 63 LAALVTLSLIVLIVILPLVFVAATLVQEIAYVYQEIKTAQPN---YSQYFQDIIHALPSS 119 Query: 121 ELWTKHLSHPQSLKILSETFLK-TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALF 175 +HL L L K T+G I + A+ G + +S M+ +F Sbjct: 120 ---IQHLLQKYGLSNLPGIQKKLTDGAAQISQLAATQALSIGQNTFQFVVSFGVMLYMVF 176 Query: 176 FFYRDGFSISQQ------LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 F RDG I ++ LD ++L A + V+R+T G +A+ +G + Sbjct: 177 FLLRDGGEIGRRVRRALPLDDEHKNLLLAKFTT-------VVRATVKGNIAVALVQGALG 229 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G +W+ G+ V G + A ++++P GA + + ++Y L+ G ++ L + Sbjct: 230 GLIFWILGIEGVVLWGALMAFLSLLPAIGASLVWVPAALYFLMIGALWKCAILVAFCVGV 289 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + +VD LRP LVG K+P +GG+ G+ G IGP++ AL W I A Sbjct: 290 IGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGITGFVIGPLVAALFMASW--DIYA 347 Query: 349 IKENKE 354 E E Sbjct: 348 RSEQGE 353 >gi|189501154|ref|YP_001960624.1| hypothetical protein Cphamn1_2238 [Chlorobium phaeobacteroides BS1] gi|189496595|gb|ACE05143.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides BS1] Length = 379 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 5/154 (3%) Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 LGE K + + IR TF +I I +G + G A +AG+ S + G + + Sbjct: 201 LGERDQSRMLDKFTSVTGATIRGTF----VIGILQGTLAGLALKVAGIESAIFWGAVMTV 256 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++IP G+ + + +YL G +AT L L+ + + VD LRP LVG K+ Sbjct: 257 LSIIPIIGSGLVWGPAVLYLYATGEYVSATGLLLFCGLLVSSVDNILRPILVGRDTKMHE 316 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L FFG GG+ G+ G +GPV+ AL +W+ Sbjct: 317 LLIFFGTFGGISLFGISGFIVGPVIAALFITVWE 350 >gi|110634577|ref|YP_674785.1| hypothetical protein Meso_2229 [Mesorhizobium sp. BNC1] gi|110285561|gb|ABG63620.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 392 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 12/189 (6%) Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP---KVIRSTFLG 217 ++ ++++ + LF+F RD + +LGE P + + IV + +T G Sbjct: 170 INQAITLLLVFYMLFYFLRDR---KLAVRALGE-FSPLNGDETAHIVAGFVDTVHATMFG 225 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 I+A +G + G +WL G+P+ G++ ++A++P GA + + +I+L ++G Sbjct: 226 TLIVAAVQGTLGGLMFWLLGLPAPAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWV 285 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP---- 332 A L +WG + + +D L P VG +KL + F G VGG+ G GL +GP Sbjct: 286 RALVLVIWGGVIIATIDNLLYPIFVGNRLKLHTVLAFIGAVGGIILFGASGLVLGPATIS 345 Query: 333 VLMALIAVI 341 + +ALIAV+ Sbjct: 346 ITLALIAVL 354 >gi|307318663|ref|ZP_07598096.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306895690|gb|EFN26443.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] Length = 359 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 16/219 (7%) Query: 138 ETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ET L GI ++ F++ F + + I LF+F RDG Q L +L Sbjct: 138 ETQLDLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDG---QQALGALK 194 Query: 193 EHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 E+ P ++++R+ V + +++ G +A +G + G +WL G+P+ V G+ Sbjct: 195 EY-SPLSSQEMNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPVVWGLAMG 253 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A++P GA I + ++ L + G A L WGA + +D L P VG +KL Sbjct: 254 LLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLH 313 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPV---LMALIAVIWKE 344 L F ++GG+ G GL IGPV + L+ IW+ Sbjct: 314 TLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRR 352 >gi|15640644|ref|NP_230273.1| hypothetical protein VC0624 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|9655058|gb|AAF93790.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 361 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 23/348 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ F K + A ++ V + + ++PLL Sbjct: 23 LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLL 82 Query: 81 LFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWASELWTKHLS----HPQSLK 134 +F +++ S+ + A Q GI L + P + L +L PQ + Sbjct: 83 IFG-AIVQQGSKFSQNLYAWVTQGGIQA---LFNHPWVVKGLSLANHYLPFEEISPQQIA 138 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 F T G + + A G + + M+ LFF RD ++ S H Sbjct: 139 QRIGQFATTFGSNLVSISAKILGDA-TSFVMHFFLMLFVLFFLLRD----HDKIISAIRH 193 Query: 195 LFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + P + R+ + V +S +G + AI +G+ G WLAG P + G + Sbjct: 194 ILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFA 252 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 253 SFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTL 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 313 MIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDR 360 >gi|289523414|ref|ZP_06440268.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503106|gb|EFD24270.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 364 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 10/171 (5%) Query: 172 IALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++ F+ RDG + + LD L + + + +R++ V+ +G T+ A G Sbjct: 180 VSTFYLLRDGHVVIEYLDDILPLPKEERASLFTSATRMMKAVV----IGTTVTA-GIQAC 234 Query: 229 LGSAYWL-AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 LG A W G+P+ + GV+ I AMIP G P ++YL + GN+ + L W Sbjct: 235 LGVAGWFFLGLPAPLLAGVLLFICAMIPFIGTPFVLIPAAVYLFLMGNVKESIILAGWAL 294 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + +D +RP + ++ FL F G+VGG+ G LG+F+GP++++L Sbjct: 295 LVVSTIDNLIRPLFISEGSRVHFLLVFLGVVGGIHVWGFLGIFLGPIVLSL 345 >gi|59712743|ref|YP_205519.1| permease [Vibrio fischeri ES114] gi|59480844|gb|AAW86631.1| predicted permease [Vibrio fischeri ES114] Length = 361 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 85/374 (22%), Positives = 158/374 (42%), Gaps = 50/374 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ +L + Y ++ + P++ A I+ P+++ + S A+++ + Sbjct: 11 HWVLIAALLAAGYACFLLIEPYLNPIILAFIMSLLFAPLHNKISDRLPNSPNSAAILSCM 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + +PL F+F +++ SK W+ D GG+ Sbjct: 71 ALTFIIAIPLFFVFI-AIVQQGATFSK---------DAYHWVID--GGI------QTLFQ 112 Query: 129 HPQSLKILS--ETFLKTNGID------FIPRFASRFGMIFLDYCLSIIFMIIALFF---- 176 HP K+LS +L + ID + + AS+ G + I+ + + Sbjct: 113 HPFVAKVLSFINKYLPFDAIDPAEVTQKVAQLASQIGTRIVGMSAQIVGDVTNVLMNFFL 172 Query: 177 -------FYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEG 226 RD ++ S H+ P + R+ + +V +S LG + AI +G Sbjct: 173 MLFVLFFLLRD----QDKIISAFRHVLPLSRSQEDRLLDEIEQVSKSAVLGSFLTAIAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A WLAG P + G + + IP G + + +IYLL+ A L WG Sbjct: 229 IAGGFAMWLAGFPG-LFWGTMMGFASFIPVVGTALIWVPATIYLLLTNQWEWAIFLTAWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + +D +RP L+ G + L FF L+GG++ GL+GL GP++ AL V++ Sbjct: 288 VLVVGSIDNIVRPLLMQGNSGMNTLLIFFSLLGGIQLYGLIGLIYGPIIFALTLVLFNMY 347 Query: 346 IMAIKENKEKISSN 359 K ++ N Sbjct: 348 ETEFKSFLDQQDKN 361 >gi|307303487|ref|ZP_07583241.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306902878|gb|EFN33470.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 359 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 16/219 (7%) Query: 138 ETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ET L GI ++ F++ F + + I LF+F RDG Q L +L Sbjct: 138 ETQLDLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDG---QQALGALK 194 Query: 193 EHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 E+ P ++++R+ V + +++ G +A +G + G +WL G+P+ V G+ Sbjct: 195 EY-SPLSSQEMNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLIFWLLGLPAPVVWGLAMG 253 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A++P GA I + ++ L + G A L WGA + +D L P VG +KL Sbjct: 254 LLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLH 313 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPV---LMALIAVIWKE 344 L F ++GG+ G GL IGPV + L+ IW+ Sbjct: 314 TLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRR 352 >gi|27375768|ref|NP_767297.1| hypothetical protein bll0657 [Bradyrhizobium japonicum USDA 110] gi|27348906|dbj|BAC45922.1| bll0657 [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 107/204 (52%), Gaps = 5/204 (2%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-DSLGEHLFPAYWKKISRIVPKVI 211 A G + +++ S++ M+ LFFF RDG ++ ++ D+L L ++ I + Sbjct: 164 AINIGQLTVEFVASLLVMLYLLFFFLRDGDELNLRIRDAL--PLRRSHTAAILDAFTLSV 221 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 R T G+ ++A+ +G + G +WL G+ + + G + A+++++P G+ + + V +YLL Sbjct: 222 RGTIKGIILVALIQGALGGLIFWLLGLTAPLLAGALMALLSLLPVLGSALVWVPVGLYLL 281 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + G + L ++G + + D LRP LVG I++P +GG+ T G G I Sbjct: 282 VAGAVTKGMILLVFGTFVIGLADNFLRPVLVGQSIRMPSYVVLLATLGGLATFGANGFVI 341 Query: 331 GPVLMALIAVIWKESIMAIKENKE 354 GP++ A+ W + KE +E Sbjct: 342 GPLVAAMFLTAW-HIFVGSKEQQE 364 >gi|254253542|ref|ZP_04946859.1| hypothetical protein BDAG_02809 [Burkholderia dolosa AUO158] gi|124898187|gb|EAY70030.1| hypothetical protein BDAG_02809 [Burkholderia dolosa AUO158] Length = 350 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 137 TEGAAQISQFAAAQALSIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G++ G +W+ G+ V G + A ++ Sbjct: 197 KNLLLAKFTT-------VVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L G I+ L + + +VD LRP LVG K+P Sbjct: 250 LLPAIGASLVWVPAALYFLATGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 310 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQSE 350 >gi|220904315|ref|YP_002479627.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868614|gb|ACL48949.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 368 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 40/305 (13%) Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A+I ++V+ L + P G ++EL AN +PV W++ I + Sbjct: 88 ALIVPIAVLVLLVSPQA---AAGFTRLRELQ-----ANNFQLPV-EWVNYI-------QQ 131 Query: 123 WTKHLS-HPQSLKILSETFLK-------------TNGIDFIPRFASRFGMIFLDYCLSII 168 W + L+ HP+ + ++ ++ + G+DF+ + FL L++I Sbjct: 132 WRQSLTEHPRLERAFNDLLMRLDSFFDTAMGLLLSRGVDFLGGTMTVLWTSFLFVSLTVI 191 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F I + R I+ ++ + + + + I R +R LG+ ++A+ +G + Sbjct: 192 FTI-----YSRRVRKITGRIFHISQSMLRRFITAIHR----ALRGIMLGIVLVALAQGFL 242 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 G A+ +AGV G++ ++A IP G + + + I L G A L LWG + Sbjct: 243 CGVAFAVAGVNQPAFWGLLATLVAPIPMVGTALVWLPLCISLWFTGKSMAAIGLGLWGML 302 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + VD LRP + IK PF ++ G+ + G +GL GPVL+A +E+ Sbjct: 303 AVAGVDNVLRPLFLRQGIKAPFFVLIIAILCGLSSFGPVGLIAGPVLLAFAMQAVEEANR 362 Query: 348 AIKEN 352 K N Sbjct: 363 IYKYN 367 >gi|146282264|ref|YP_001172417.1| putative lipoprotein [Pseudomonas stutzeri A1501] gi|145570469|gb|ABP79575.1| lipoprotein, putative [Pseudomonas stutzeri A1501] gi|327480512|gb|AEA83822.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166] Length = 364 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 12/317 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F + + A ++ F SWP+ ++T A + T S M L VPL++L + Sbjct: 22 WVLAPFASALFWAAVLAFASWPVMRLLTRWLNGNATLAAGLLTFSWMVLVAVPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLK 142 ++++ + + G+P P WL ++P G W +L ++ Sbjct: 82 IADQIRDANALLHDLQVEGLPPAPEWLGELPLIGDSLVNFWNTVDEQGTALIASIRPYIG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R ++R G L+ LS++ + FFFYRDG +S + SL L Sbjct: 142 QVANWLLVR-SARIGGGMLELALSLVLV----FFFYRDGPRLSAFVHSLLHRLIGDRADH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA--MIPGGAPI 260 +V ++ G+ A + ++ + +AG+P + LG++T + M+P P+ Sbjct: 197 YLELVAGTVQRVVNGVIGTAAAQAILAYIGFLIAGIPGALVLGLLTFACSFIMVP---PL 253 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +L +G+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 254 IWGPAVAWLAWQGDYGMAVFLGIWGMFVISGVDNVLKPYLISRGGNLPLVVVLLGVFGGI 313 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLF+GP L+A+ Sbjct: 314 LAFGFMGLFLGPTLLAV 330 >gi|115360276|ref|YP_777414.1| hypothetical protein Bamb_5533 [Burkholderia ambifaria AMMD] gi|115285564|gb|ABI91080.1| protein of unknown function UPF0118 [Burkholderia ambifaria AMMD] Length = 355 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ LFF RDG I ++ LD Sbjct: 142 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMLFFLLRDGGEIGRRVRRSIPLDEEH 201 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 202 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 254 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L G I+ L + + +VD LRP LVG K+P Sbjct: 255 LLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 314 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 315 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 355 >gi|251771895|gb|EES52469.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum] Length = 369 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 21/330 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + P+L A I+ F ++P+ + F+ + A++ TV + L I PLL + + Sbjct: 34 LAPYVVPLLWAAILAFATYPLLA-FLRRFVTRPLLSALLMTVLFLGLVIAPLL---SFAL 89 Query: 87 LEMKELVSKVV-----LANQHGIPVPRWLSDIPGGMWASELWTKHL-SHPQSLKILSETF 140 +E++++V L N +P W+ +P +E W ++ SH SL I + Sbjct: 90 PLTQEILTEVAKIRGFLENPQAT-LPPWVDHLPVIGPRAEGWYQNFRSHTPSLSIFLDK- 147 Query: 141 LKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF- 196 L+++ + + R I D + + +++ LF FY G ++ + +L Sbjct: 148 LQSHLLTW----GDRLFSIMTDAGKIAVKTLILLLGLFAFYLRGPALWAGIRTLLLRFGG 203 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 PA + ++I P V R GM A+ + + G + +A VP + L + +A+ P Sbjct: 204 PATERPFNQIAP-VTRGVVYGMFFTALSQAALAGIGFGVARVPEALLLTFLLFFLALFPM 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 GA + S LL +G +W AI + ++ ++P +G ++PF+ G+ Sbjct: 263 GAVAVWLPASFTLLAQGRTLAFLLFLVWNAIVVGGIENVIKPLFIGRSSEMPFILILLGV 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +GG+ G++GLFIGPV++ ++ +W+++I Sbjct: 323 LGGLEAFGIIGLFIGPVILVILQTLWQDAI 352 >gi|320352416|ref|YP_004193755.1| hypothetical protein Despr_0280 [Desulfobulbus propionicus DSM 2032] gi|320120918|gb|ADW16464.1| protein of unknown function UPF0118 [Desulfobulbus propionicus DSM 2032] Length = 404 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 3/137 (2%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 V ++T G II +G + G A+ LAG+ V G + A+M++IP G I + I Sbjct: 203 SVTKATLKGTLIIGALQGFICGVAFALAGIQGPVFWGTVMAVMSIIPAFGTAIVWVPALI 262 Query: 268 YLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L +KG F A L L GA+ + D LRP LVG ++ L FG +GG+ G+L Sbjct: 263 ILALKGQFFGAVILGVLCGAVAGNL-DNLLRPRLVGKDTEMHDLFVLFGTLGGISMFGVL 321 Query: 327 GLFIGPVLMALIAVIWK 343 G+ IGP++ AL IW+ Sbjct: 322 GIIIGPIVAALFITIWE 338 >gi|254248847|ref|ZP_04942167.1| hypothetical protein BCPG_03698 [Burkholderia cenocepacia PC184] gi|124875348|gb|EAY65338.1| hypothetical protein BCPG_03698 [Burkholderia cenocepacia PC184] Length = 353 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 140 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 199 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 200 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 252 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L+ G I+ L + + +VD LRP LVG K+P Sbjct: 253 LLPAIGASLVWVPAALYFLMIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 313 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 353 >gi|325528611|gb|EGD05706.1| hypothetical protein B1M_05106 [Burkholderia sp. TJI49] Length = 350 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFASR----FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 137 TDGAAQISQFAASQALSIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 197 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIQGVVLWGALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L+ G ++ L + + +VD LRP LVG K+P Sbjct: 250 LLPAIGASLVWVPAALYFLMTGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 310 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARAEQGE 350 >gi|256059328|ref|ZP_05449530.1| hypothetical protein Bneo5_03088 [Brucella neotomae 5K33] Length = 352 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 26 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 86 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 140 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 197 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LR LVG ++P VGG+ Sbjct: 257 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRLPLVGKGTRMPDYVVLISTVGGIS 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 317 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 347 >gi|261323287|ref|ZP_05962484.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261299267|gb|EEY02764.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 354 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 20/334 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF----YYG 85 ++ VL A+I+ +P+ + A ++ + +CL I+P+L +F G Sbjct: 28 YYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAFLSVLMCICLVIIPMLAIFGSLVDEG 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL---SHPQSLKILSETFLK 142 + L S+ N + + R ++ +P + E W K + +S ++ Sbjct: 88 TSLYQRLSSREFDINGY---IARIMAALPESL---EEWLKRFELGTFADWRARISSVVMQ 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F R S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 142 GSQL-FAARLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADVGKKIRR-AIPLSDDYTRQ 198 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 VIR+T G IIAI +G++ G +WL G+ + + GVI +M+P GA + Sbjct: 199 FLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLWGVIMTFCSMLPAVGAALV 258 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +T +++ + G+ ++ L + G + + +VD LR LVG ++P VGG+ Sbjct: 259 WTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRLPLVGKGTRMPDYVVLISTVGGIS 318 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ G IGP++ A+ W S++A +E K++ Sbjct: 319 LIGINGFVIGPLIAAMFIAAW--SLLA-EEQKDQ 349 >gi|238753651|ref|ZP_04615013.1| hypothetical protein yruck0001_13830 [Yersinia ruckeri ATCC 29473] gi|238708203|gb|EEQ00559.1| hypothetical protein yruck0001_13830 [Yersinia ruckeri ATCC 29473] Length = 367 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/347 (22%), Positives = 151/347 (43%), Gaps = 12/347 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +I+ + ++ F A ++ +WP+ + + +I T+ ++ LF+ Sbjct: 21 ILTMIIACFWVVQPFIMGFAWAGMVVIATWPLLIKLQAVLWGRRSLAVIIMTLLLVLLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK-HLSHPQSLK 134 +P+ L + L+ IP WL IP M +L++ H K Sbjct: 81 IPIALLVSSLVENSAPLIKSASSPANLQIPEAAWLKSIP--MIGDKLYSSWHTLLAGGGK 138 Query: 135 IL---SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + ++ F+ + A+ G L L ++F ++ Y G S++Q + Sbjct: 139 VLIAKVQPYVGETATWFVAQ-AAHIGRFLLHLALMVLFSVL----LYFRGESVAQGIRHF 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + IR+ LG+ + A+ +G++ G +AG+P + L V+ + Sbjct: 194 AIRLADQRGDAAVVLAAQSIRAVALGVVVTALVQGILGGIGLAIAGIPYAMLLTVVMFVC 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I+L G+ T L +W I + +D LRP L+ LP + Sbjct: 254 CVAQLGPLLVLIPAVIWLYWSGDNTFGTLLLVWSCI-VGTLDGVLRPALIRMGADLPMVL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + I E +E I+ Sbjct: 313 ILSGVIGGLLSFGMIGLFIGPVVLAVSYRLIAAWIHEAPEPEENIAE 359 >gi|209521729|ref|ZP_03270416.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209497846|gb|EDZ98014.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 371 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 13/340 (3%) Query: 5 MLNPQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q I R +F ++V SL L F +L I+ ++SW +Y Sbjct: 1 MKSDQLIERLAAVFALIVLVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTGVVGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A + + ++ + + P ++ + + ++V+ V + G+P +P W+ IP G Sbjct: 61 LAATLIVLIILVVVLGPFVYAGFAFGTHVHQIVALVERLFESGLPDLPPWVQRIPLVGSS 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPR-FASRFGMIFLDYCLSIIFMIIALFFF 177 W + S L T G + A G+ L LSI+ FFF Sbjct: 121 IEAFWERVTSSNSELIAQLRTLAAPAGKWILAAGLAVTHGLGLL--ALSIVLA----FFF 174 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y G + L++ + + + ++ G+ A+ + ++ G WLAG Sbjct: 175 YTGGEGAAAWLNAGMRRVAGERADYLLALAGSTVKGVVYGILGTALVQAVLAGFGCWLAG 234 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP+ LG+ T ++++PGG I + +I+L G+ A L +WG + + + D ++ Sbjct: 235 VPAPALLGLATFFLSVVPGGPVIVWLPAAIWLYQGGSTGWAIFLVVWGVLVVGMSDNVIK 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 P L+G +P + G++GG G LG+FIGP L+A+ Sbjct: 295 PILIGKNSDMPLILVMLGILGGALAFGFLGVFIGPTLLAV 334 >gi|330828110|ref|YP_004391062.1| hypothetical protein B565_0410 [Aeromonas veronii B565] gi|328803246|gb|AEB48445.1| Putative membrane protein [Aeromonas veronii B565] Length = 361 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 15/325 (4%) Query: 19 IILVSLYFLKGFFAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I+++S + + F P L A +I +WP+ T A+ T+ ++ +F++P Sbjct: 20 ILIISCFLVLQPFLPALVWATMITIATWPLMLMVQRLLWGKRTLAALFMTLVLLLMFVIP 79 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL--K 134 L + L+ +Q P WL IP G + W + L+ + Sbjct: 80 LFMTLANVAEKAPMLIELGTHISQSPPPELLWLQQIPLVGDKLYDFWQQILASGGQVLFA 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L+ F +T ++ A G++F+ + L++ + Y G ++ + Sbjct: 140 KLAPYFGQTA--RWLASQAGNLGLLFVHFLLTVGICGV----LYHSGEVVATGIRRFAHR 193 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AIMA 252 L + + + IR+ +G+ + A+ + V G +AG+P + L V+ I+A Sbjct: 194 LAGQRGDNATVLASQAIRAVAMGVVVTALVQSSVAGVGLLIAGIPYAMVLVVVMFLLIVA 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 I G P+ + YL G+ T L +W I +D LRPFL+ LP + Sbjct: 254 QI-GPFPVLLACIG-YLYWSGDTTWGTFLLVWSLIA-GTMDNFLRPFLIKRGADLPLILI 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ TMG++GLFIGPV++A+ Sbjct: 311 LVGVIGGLLTMGIIGLFIGPVVLAV 335 >gi|206562699|ref|YP_002233462.1| hypothetical protein BCAM0842 [Burkholderia cenocepacia J2315] gi|198038739|emb|CAR54700.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 350 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 137 TDGAAQISQFAAAQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 197 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L+ G ++ L + + +VD LRP LVG K+P Sbjct: 250 LLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 310 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 350 >gi|170736099|ref|YP_001777359.1| hypothetical protein Bcenmc03_3717 [Burkholderia cenocepacia MC0-3] gi|169818287|gb|ACA92869.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 350 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 137 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 197 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L+ G ++ L + + +VD LRP LVG K+P Sbjct: 250 LLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 310 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 350 >gi|107026899|ref|YP_624410.1| hypothetical protein Bcen_4556 [Burkholderia cenocepacia AU 1054] gi|105896273|gb|ABF79437.1| protein of unknown function UPF0118 [Burkholderia cenocepacia AU 1054] Length = 398 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 185 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 244 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 245 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 297 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L+ G ++ L + + +VD LRP LVG K+P Sbjct: 298 LLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 357 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 358 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 398 >gi|116691904|ref|YP_837437.1| hypothetical protein Bcen2424_3807 [Burkholderia cenocepacia HI2424] gi|116649904|gb|ABK10544.1| protein of unknown function UPF0118 [Burkholderia cenocepacia HI2424] Length = 353 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 140 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 199 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 200 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 252 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L+ G ++ L + + +VD LRP LVG K+P Sbjct: 253 LLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 313 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 353 >gi|329113453|ref|ZP_08242234.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] gi|326697278|gb|EGE48938.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] Length = 363 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/345 (23%), Positives = 163/345 (47%), Gaps = 29/345 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF--IVPLLFLFYY 84 L F + +L A ++ +T+WP++ + ++ L T++V+C ++PL FL Sbjct: 29 LAPFSSALLWAGVLAYTTWPLFQHLRRRMGPNAASL----TMTVLCAVGVVLPLAFLASA 84 Query: 85 GMLEMKELVSKVV--LANQHGIP-VPRWLSDIPG------GMWASELWTKHLSH-PQSLK 134 + +V+ + H +P +P W++ +P W E W++++S L+ Sbjct: 85 CVSSGPRWARQVMAFVGTIHELPPLPHWITSLPAFGPDISHHW--ERWSRNISSVGDELR 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +++ ++ + R A + L ++ + FFF+ G + + ++ Sbjct: 143 PYAGEIIQSL-LEVLMRMA--------NGALHLVMALFIAFFFWLSGPMLWDTVQAVMVR 193 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + IV +R T G+ AI +G++ G WL GV V LGV+ A +A+ Sbjct: 194 IAGHQAGRHLHIVGSTVRGTVYGILGTAIIQGILTGLGLWLLGVGEAVILGVLAAFLAVF 253 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P GAP+ + +++L + L L+G + + D +RP + KLP+L T Sbjct: 254 PIGAPLVWIPAALWLFGMHHPGKGILLLLYGVLIISGADHLIRPLFIARGSKLPYLLTVL 313 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G +G+F+GP+L+A+ + E A E + ++ + Sbjct: 314 GVIGGLLAFGGVGIFLGPILLAIGFTLTTE--FAADEAAQPLAQD 356 >gi|16264659|ref|NP_437451.1| hypothetical protein SM_b21335 [Sinorhizobium meliloti 1021] gi|15140797|emb|CAC49311.1| conserved putative membrane protein, possibly a permease [Sinorhizobium meliloti 1021] Length = 359 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 16/219 (7%) Query: 138 ETFLKTNGI-----DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ET L GI ++ F++ F + + I LF+F RDG Q L +L Sbjct: 138 ETQLDLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDG---QQALGALK 194 Query: 193 EHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 E+ P ++++R+ V + +++ G +A +G + G +WL G+P+ + G+ Sbjct: 195 EY-SPLSSQEMNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMVWGLAMG 253 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A++P GA I + ++ L + G A L WGA + +D L P VG +KL Sbjct: 254 LLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLH 313 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPV---LMALIAVIWKE 344 L F ++GG+ G GL IGPV + L+ IW+ Sbjct: 314 TLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRR 352 >gi|256828705|ref|YP_003157433.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256577881|gb|ACU89017.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 10/227 (4%) Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LG 192 LS+ L ++G +I + A G L + +++ M+ FF RDG + L LG Sbjct: 143 LSDFALTSSG--YIAQNALALGQGTLQFFVALGLMLYMAFFMLRDGDKLVATLVRALPLG 200 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + K + +V+R+T G ++A +G++ G +W+ + + GV+ +++ Sbjct: 201 NEREYLLFNKFA----EVVRATVKGNLLVAAVQGILGGFIFWVLDIHGALLWGVVMTLLS 256 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP GA + + V+IYL G + + L +GA + + D LRP LVG KLP Sbjct: 257 LIPVIGAGLIWGPVAIYLFAIGELSHGVILVAYGAGVIGLADNILRPLLVGRDTKLPDYI 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GG G+ G +GP++ AL W+ I +K +S Sbjct: 317 VLLSTLGGFSLFGMNGFVLGPLVAALFIAFWEIFIREFNTSKSGNAS 363 >gi|309780687|ref|ZP_07675428.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|308920369|gb|EFP66025.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 349 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 20/339 (5%) Query: 15 MIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++F++ + L + L FF V +I+ P+ + +++ + A+ ++ + Sbjct: 13 LLLFVVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRPNLAALATLTLIILI 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+P++F+ + E+ ++ A + R+LS+ + A W + L L Sbjct: 73 VILPVIFVTATIVQEIGVAYQQIQGAQPN---YSRYLSE---AVQALPTWVQQLLAKAGL 126 Query: 134 KILSETFLK-TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ K +G I +FA+ G + + M+ +FF RDG I +++ Sbjct: 127 TNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDGTDIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 P + ++ K V+R+T G +A+ +G++ G +W G+ V G Sbjct: 187 ----RRALPMDEEHKRLLLNKFTTVVRATVKGNIAVALVQGVLGGLIFWFLGIDGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + V++Y L+ G I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWIPVALYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 K+P +GG+ G+ G IGP++ AL W Sbjct: 303 TKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASWD 341 >gi|283781384|ref|YP_003372139.1| hypothetical protein Psta_3618 [Pirellula staleyi DSM 6068] gi|283439837|gb|ADB18279.1| protein of unknown function UPF0118 [Pirellula staleyi DSM 6068] Length = 542 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 14/239 (5%) Query: 112 DIPGGMWASELWTKHLSHP--QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 D GG + + W L++P + ++ L ++ L T + S I ++ Sbjct: 210 DFLGGPYRA--WLTELANPTDEQIEDLRQSTLLTASSPLVS-LGSDTVAIVGKLAFGVVI 266 Query: 170 MIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 M+ ALFF + +G + + +L L E + R+ V+ +T L A+ +G Sbjct: 267 MVAALFFLFAEGGKMLNAAIRLSPLEERYVRELVGEFDRVCRAVVAATLLS----AVAQG 322 Query: 227 LVLGSAYWLAGVPSHVAL-GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 ++ G ++ AGV VAL V+T ++A++P GA + SIYL G+ A L ++ Sbjct: 323 ILAGIGFYFAGVQHAVALLMVLTCVLAIVPFTGAAAVWIPTSIYLYYDGHTTAAILLAIY 382 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 GA + D ++P ++ G L L ++GG++ +G +G+ +GP+++ + + K Sbjct: 383 GAAIVSTADNIIKPLVLHGQSNLHPLLALLSVIGGIQALGPIGILVGPMVVVFLQTLLK 441 >gi|15596822|ref|NP_250316.1| hypothetical protein PA1625 [Pseudomonas aeruginosa PAO1] gi|9947592|gb|AAG05014.1|AE004590_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 355 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 16/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASEL---WTKHLSHPQSLKILS 137 + ++ L+ + G+P P W++ +P + L W + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVP--LIGDRLIGWWDSIDQQGVAFFYVL 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ G + R A G I L ++ +I +FFFYRDG + + E L Sbjct: 137 KPYVGEVGNWLLARSAKIGGGI-----LELVLSLILIFFFYRDGPRLESIVHRALERLIG 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AIMAMIP 255 + +V ++ G+ A + L+ + +AGVP + LG++T + M+P Sbjct: 192 NRAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLLMVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + + +L KG+ + L LWG + VD L+P+L+ LP + G Sbjct: 252 ---PLVWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLG 308 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 + GG+ G +GLF+GP+L+A+ Sbjct: 309 VFGGLLAFGFMGLFLGPILLAV 330 >gi|288940576|ref|YP_003442816.1| hypothetical protein Alvin_0838 [Allochromatium vinosum DSM 180] gi|288895948|gb|ADC61784.1| protein of unknown function UPF0118 [Allochromatium vinosum DSM 180] Length = 401 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 8/178 (4%) Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEG 226 ++ +LFF DG +L + P + + ++ K V R+T G +I + +G Sbjct: 165 LLYSLFFLLMDGPKFILKL----LYYLPLHTRDERLMLDKFTSVTRATLKGSFLIGVLQG 220 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A+ +AG+ + V G + A++++IP GA + + I L+ +G + A L L+ Sbjct: 221 GLAGIAFAVAGIDNAVFWGTLMALLSIIPNVGAALVWIPAVIILIAQGAVLTAILLALFC 280 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + +D LRP LVG ++ L FF +GG+ GL GLFIGPV+ +L+ IW+ Sbjct: 281 GLIVGSLDNVLRPILVGKDTRMHELMIFFSTLGGLLMFGLPGLFIGPVIASLLISIWE 338 >gi|134292899|ref|YP_001116635.1| hypothetical protein Bcep1808_4190 [Burkholderia vietnamiensis G4] gi|134136056|gb|ABO57170.1| protein of unknown function UPF0118 [Burkholderia vietnamiensis G4] Length = 350 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 24/225 (10%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 137 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 197 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++P GA + + ++Y L G ++ L F G I L VD LRP LVG K+P Sbjct: 250 LLPAIGASLVWVPAALYFLATGAVWKCVILVGFCVGVIGL--VDNLLRPILVGKDTKMPD 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 308 WVVLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARAEQGE 350 >gi|330821282|ref|YP_004350144.1| hypothetical protein bgla_2g21980 [Burkholderia gladioli BSR3] gi|327373277|gb|AEA64632.1| hypothetical protein bgla_2g21980 [Burkholderia gladioli BSR3] Length = 350 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 139/328 (42%), Gaps = 29/328 (8%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF + I+ P+ F + + A++ ++ + I+PL F+ Sbjct: 29 FFGAIFWGTILAILFQPVQRWFAAHFGKRRNLAALVTLSLIVLIVILPLSFV-------A 81 Query: 90 KELVSKVVLANQHGIPVPR-----WLSDIPGGMWASELWTKHLSHPQSLKILSETFLK-T 143 LV ++ A Q I + WL +I + AS + + H L ++ K T Sbjct: 82 GTLVQEIAFAYQQ-IKAAQPNMTGWLQEIVHALPAS---LQRILHSYGLTDIAGIQKKLT 137 Query: 144 NGIDFIPRF----ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +G I +F A G + +S M+ +FF RDG I +++ P Sbjct: 138 DGAAAISQFVAAQAFSIGQNTFQFIVSFGIMLYLVFFLLRDGGEIGRRV----RRALPLD 193 Query: 200 WKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ K V+R+T G +AI +G + G +W+ G+ + G + A ++++P Sbjct: 194 EDHKQLLLTKFTTVVRATVKGNIAVAIVQGALGGLIFWILGIEGVLLWGALMAFLSLLPA 253 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA + + ++Y + G I+ L + + +VD LRP LVG K+P Sbjct: 254 IGAGLVWAPAAVYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLIS 313 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ G+ G IGP++ AL W Sbjct: 314 TLGGMALFGINGFVIGPLVAALFMASWD 341 >gi|254234725|ref|ZP_04928048.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126166656|gb|EAZ52167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 355 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 16/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASEL---WTKHLSHPQSLKILS 137 + ++ L+ + G+P P W++ +P + L W + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVP--LIGDRLIGWWDSIDQQGVAFFYVL 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ G + R A G I L ++ +I +FFFYRDG + + E L Sbjct: 137 KPYVGEVGNWLLARSAKIGGGI-----LELVLSLILIFFFYRDGPRLESIVHRALERLIG 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AIMAMIP 255 + +V ++ G+ A + L+ + +AGVP + LG++T + M+P Sbjct: 192 NRAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLLMVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + + +L KG+ + L LWG + VD L+P+L+ LP + G Sbjct: 252 ---PLVWGPTTAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLG 308 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 + GG+ G +GLF+GP+L+A+ Sbjct: 309 VFGGLLAFGFMGLFLGPILLAV 330 >gi|262401678|ref|ZP_06078244.1| predicted permease [Vibrio sp. RC586] gi|262352095|gb|EEZ01225.1| predicted permease [Vibrio sp. RC586] Length = 361 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 87/361 (24%), Positives = 157/361 (43%), Gaps = 49/361 (13%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI++ K A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIVMAFIISLLMFPIHAWLDKKLPSHHNLSAFLSCVVLTVIVVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--- 137 +F +++ S+ + A W++ GG+ + L+HP +K LS Sbjct: 83 IFG-AIVQQGSKFSQNLYA---------WVTQ--GGI------QEVLNHPWVVKGLSLAN 124 Query: 138 -----ETFLKTNGIDFIPRFASRFGMIFLD-----------YCLSIIFMIIALFFFYRDG 181 E I +FA+ FG + + ++ M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGTNLVSISAKILGDATSFVMNFFLMLFVLFFLLRD- 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ S H+ P + R+ + V +S +G + AI +GL G WLAG Sbjct: 184 ---HDKIISAIRHILPLSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGF 240 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G + + IP G + + ++YL + G A L +W + +D LR Sbjct: 241 PG-LFWGTMMGFASFIPVVGTALIWIPATLYLFLIGETSWAIFLAIWSIAVVGSIDNLLR 299 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKE 354 PFL+ G + L FF L+GG++ GL+GL GP++ A+ V I++E + + ++ Sbjct: 300 PFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 Query: 355 K 355 Sbjct: 360 N 360 >gi|116049570|ref|YP_791626.1| hypothetical protein PA14_43510 [Pseudomonas aeruginosa UCBPP-PA14] gi|296390001|ref|ZP_06879476.1| hypothetical protein PaerPAb_17706 [Pseudomonas aeruginosa PAb1] gi|313106640|ref|ZP_07792863.1| putative permease [Pseudomonas aeruginosa 39016] gi|115584791|gb|ABJ10806.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|310879365|gb|EFQ37959.1| putative permease [Pseudomonas aeruginosa 39016] Length = 355 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 16/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASEL---WTKHLSHPQSLKILS 137 + ++ L+ + G+P P W++ +P + L W + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVP--LIGDRLIGWWNSIDQQGVAFFYVL 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ G + R A G I L ++ +I +FFFYRDG + + E L Sbjct: 137 KPYVGEVGNWLLARSAKIGGGI-----LELVLSLILIFFFYRDGPRLESIVHRALERLIG 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AIMAMIP 255 + +V ++ G+ A + L+ + +AGVP + LG++T + M+P Sbjct: 192 NRAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFTIAGVPGAMLLGLLTFACSLLMVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + + +L KG+ + L LWG + VD L+P+L+ LP + G Sbjct: 252 ---PLVWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLG 308 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 + GG+ G +GLF+GP+L+A+ Sbjct: 309 VFGGLLAFGFMGLFLGPILLAV 330 >gi|172062740|ref|YP_001810391.1| hypothetical protein BamMC406_3708 [Burkholderia ambifaria MC40-6] gi|171995257|gb|ACB66175.1| protein of unknown function UPF0118 [Burkholderia ambifaria MC40-6] Length = 355 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 142 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRSIPLDEEH 201 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 202 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 254 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L G I+ L + + +VD LRP LVG K+P Sbjct: 255 LLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 314 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 315 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 355 >gi|170701167|ref|ZP_02892139.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|171317430|ref|ZP_02906622.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] gi|170133910|gb|EDT02266.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|171097385|gb|EDT42228.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] Length = 350 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFAS----RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +FA+ G + +S M+ +FF RDG I ++ LD Sbjct: 137 TDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRVRRSIPLDEEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++L A + V+R+T G +A+ +G + G +W+ G+ V G + A ++ Sbjct: 197 KNLLLAKFTT-------VVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + ++Y L G I+ L + + +VD LRP LVG K+P Sbjct: 250 LLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWV 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 310 VLISTLGGMALFGINGFVIGPLVAALFMASW--DIYARSEQGE 350 >gi|107101057|ref|ZP_01364975.1| hypothetical protein PaerPA_01002087 [Pseudomonas aeruginosa PACS2] gi|218892418|ref|YP_002441285.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254239971|ref|ZP_04933293.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126193349|gb|EAZ57412.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218772644|emb|CAW28429.1| putative permease [Pseudomonas aeruginosa LESB58] Length = 355 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 16/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASEL---WTKHLSHPQSLKILS 137 + ++ L+ + G+P P W++ +P + L W + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVP--LIGDRLIGWWDSIDQQGVAFFYVL 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ G + R A G I L ++ +I +FFFYRDG + + E L Sbjct: 137 KPYVGEVGNWLLARSAKIGGGI-----LELVLSLILIFFFYRDGPRLESIVHRALERLIG 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AIMAMIP 255 + +V ++ G+ A + L+ + +AGVP + LG++T + M+P Sbjct: 192 NRAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLLMVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + + +L KG+ + L LWG + VD L+P+L+ LP + G Sbjct: 252 ---PLVWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLG 308 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 + GG+ G +GLF+GP+L+A+ Sbjct: 309 VFGGLLAFGFMGLFLGPILLAV 330 >gi|197335578|ref|YP_002156935.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] gi|197317068|gb|ACH66515.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] Length = 361 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/358 (23%), Positives = 153/358 (42%), Gaps = 50/358 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ +L + Y ++ + P++ A I+ P+++ + S A+++ + Sbjct: 11 HWVLIAALLAAGYACFLLIEPYLNPIILAFIMSLLFAPLHNKISDRLPNSPNSAAILSCM 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + +PL F+F +++ SK W+ D GG+ Sbjct: 71 ALTFIIAIPLFFVFI-AIVQQGATFSK---------DAYHWVID--GGI------QTLFQ 112 Query: 129 HPQSLKILS--ETFLKTNGID------FIPRFASRFGMIFLDYCLSIIFMIIALFF---- 176 HP K LS +L + ID + + AS+ G + I+ + + Sbjct: 113 HPFVAKALSFINKYLPFDAIDPAEVTQKVAQLASQIGTRIVGMSAQIVGDVTNVLMNFFL 172 Query: 177 -------FYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEG 226 RD ++ S H+ P + R+ + +V +S LG + AI +G Sbjct: 173 MLFVLFFLLRD----QDKIISAFRHVLPLSRSQEDRLLDEIEQVSKSAVLGSFLTAIAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A WLAG P + G + + IP G + + +IYLL+ A L WG Sbjct: 229 IAGGFAMWLAGFPG-LFWGTMMGFASFIPVVGTALIWVPATIYLLLTNQWEWAIFLTAWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + +D +RP L+ G + L FF L+GG++ GL+GL GP++ AL V++ Sbjct: 288 VLVVGSIDNIVRPLLMQGNSGMNTLLIFFSLLGGIQLYGLIGLIYGPIIFALTLVLFN 345 >gi|330502637|ref|YP_004379506.1| hypothetical protein MDS_1723 [Pseudomonas mendocina NK-01] gi|328916923|gb|AEB57754.1| hypothetical protein MDS_1723 [Pseudomonas mendocina NK-01] Length = 353 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/346 (23%), Positives = 159/346 (45%), Gaps = 12/346 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M +P + I+ ++LV++ F L F+ V A+++ P+ I + S Sbjct: 1 MQSPTFEQKAFILLLVLVTIAFFWILLPFYGAVFWAMVLAVVFAPLQERLIRRTGGRSNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWAS 120 A++ ++ + + I+P++F+ + E L K+ G V ++ +P + Sbjct: 61 AALLTSIICLLVAILPVIFITSSVVAEGASLYQKLESGELDIGTYVTSFIQMLPPSI-QE 119 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L +S L+ E K G ++ G ++ + M+ LFF Sbjct: 120 QLDRLGMSDLDGLR---EQVSKGAMAGSQYLATKVFAIGQGTFEFFIGFFVMLYLLFFLL 176 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG + ++ + L +++ +V+R+T G ++A +G + G +W G+ Sbjct: 177 RDGKELVHKIRTT-IPLADTTKRRLQIKFTRVVRATVKGNVVVAAVQGALGGFIFWALGI 235 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 S + GV+ A ++++P GA I + V++YL++ G++ L +G + + +VD LR Sbjct: 236 YSPLLWGVLMAFLSLLPAAGAGIVWAPVAVYLMLSGSLVQGIILTAFGVLVIGLVDNILR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P LVG ++P +GG+ +GL G IGP++ AL W Sbjct: 296 PILVGKDTRMPDYLILISTLGGLSLLGLNGFVIGPLVAALFVASWN 341 >gi|317153667|ref|YP_004121715.1| hypothetical protein Daes_1960 [Desulfovibrio aespoeensis Aspo-2] gi|316943918|gb|ADU62969.1| protein of unknown function UPF0118 [Desulfovibrio aespoeensis Aspo-2] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L + M+ LF+F RDG + + L L P I + +V R +G ++A+ Sbjct: 174 LHFLLMVFILFYFMRDGAKMVAYVKLL-SPLRPRQEDYIIDSLRRVARGVLMGCLLVAVL 232 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLF 282 +GL G+ + G+P+ G + A+ ++IP G + AV +LL+ G AT L Sbjct: 233 QGLAGGAGLAVVGIPAFF-WGAMMALASLIPVLGTGLVWVPAVG-FLLLSGQWKEATLLA 290 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LW I + +D LRP + ++ F ++GGV T G+LG+F GP++++L+ V+ Sbjct: 291 LWCGIVVVGIDTILRPIFMREASRVSTFYIFLAILGGVYTFGMLGIFYGPLILSLVMVML 350 Query: 343 KESIMAIKENKEKISS 358 + + ++E E + Sbjct: 351 Q---IYVEEYAEDLKD 363 >gi|118602640|ref|YP_903855.1| hypothetical protein Rmag_0639 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567579|gb|ABL02384.1| protein of unknown function UPF0118 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 360 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 52/353 (14%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE-----SSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F P +SAL F S I + SK E+ SS A++ T+ V + I+PL ++ Sbjct: 29 FTPFISAL---FLSLMIAITTFSKYEQLQNRFSSNNSALLTTLLVTIVLILPLGYILLIS 85 Query: 86 MLEMKELVSKV----------VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LE+ L+ + + NQ +P LSD +S L + +K Sbjct: 86 TLEISTLIQTINHDLNFDKITQILNQTVTKLP--LSDFIKNTLSSTLNNNLEALFIGVKD 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG--- 192 S LK+ I +S F L +I +I L++FY DG I ++ SL Sbjct: 144 FSIVILKS-----IVSLSSHF-------ILFLIIVIFTLYYFYIDGKKIVTRIKSLSPLE 191 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 HL + + ++ S FL IA+ +G++ + G+P+ + G+ A+ + Sbjct: 192 AHLNNILLNQFKNLSITLVGSVFL----IALLQGMIFSITIIIIGLPA-LYFGIAMAMAS 246 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV-------GG 303 IP G I + +S+YL +G I +A + L GA+ + FIVD RP ++ G Sbjct: 247 FIPLLGGLIIWLPLSLYLYAQGQITDALIVALSGAVVIGFIVDNLARPSIIKFLSKKSNG 306 Query: 304 PIKLPF-LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L L T + G+ G+LGLFIGP++ A+ I+ I +I+ NK++ Sbjct: 307 TNTLDHTLITVLSTLSGIIQFGILGLFIGPIIAAMAISIFD--IYSIRYNKDR 357 >gi|90414156|ref|ZP_01222138.1| hypothetical membrane protein [Photobacterium profundum 3TCK] gi|90324828|gb|EAS41361.1| hypothetical membrane protein [Photobacterium profundum 3TCK] Length = 368 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 161/342 (47%), Gaps = 30/342 (8%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLA 63 + +R ++FI+L Y +K F PVL II P+ + K+ S+T +A Sbjct: 21 ESAIRVGLLFILLAWSYGIVKPFLIPVLWGAIIAVALMPLTVKLENMLKGKRGLSATVIA 80 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASE 121 +I + + VP + +F M+E E ++ + + IP P +++IP G + Sbjct: 81 LIG----ILILTVPFV-MFSISMVESVEGITSTISSGTLKIPGPTERIANIPIIGQQIFD 135 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFF-- 176 +W ++ L + F K F+P+ S M + + +SI+ +I+L Sbjct: 136 VWQLFSTN------LEKAFTK-----FLPQLTSGLAMMASVVGNSIVSILMFVISLLISA 184 Query: 177 -FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + SIS+ +++L + A+ ++ + + IRS LG+ +A + ++G + Sbjct: 185 AFMANATSISKSVNTLSVRIAGAHGEEWATLCTATIRSVLLGVVGVACIQAFLVGIGVFA 244 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P+ + ++ + A+ A + V Y+ + AT +W + + D Sbjct: 245 IGLPTAGLITILVLVFAIAQLPALLVVAPVIAYVYSIHDSTTATIFAVWTLLA-GLSDNF 303 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+P L+G + +P G +GG+ + G+LGLFIGPV++A+ Sbjct: 304 LKPLLMGRGLDIPMPVILLGAIGGMVSSGILGLFIGPVILAI 345 >gi|146306684|ref|YP_001187149.1| hypothetical protein Pmen_1653 [Pseudomonas mendocina ymp] gi|145574885|gb|ABP84417.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 362 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 84/358 (23%), Positives = 161/358 (44%), Gaps = 34/358 (9%) Query: 4 TMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 TM +P + I+ + LV++ F L F+ V A+++ P+ + Sbjct: 8 TMPSPSVEHKAFILLLALVTIAFFWILLPFYGAVFWAIVLAVVFAPLQQRLARRFGGRGN 67 Query: 61 FLAVIATVSVMCLFIVPLLFLF---------YYGMLEMKELVSKVVLANQHGIPVPRWLS 111 A++ + + + I+P++F+ Y LE EL + N + +P ++ Sbjct: 68 LSALLTLIVCLLVAILPVIFVISAVVAEGTSLYQRLESGELDIGAYVTNTIEM-LPPFMQ 126 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIF 169 D H +L+ L E K G ++ G + ++ + Sbjct: 127 D-----------QLHRFGMSNLEGLREQISKGAMAGSQYLATKVFVIGQMTFEFLIGFFI 175 Query: 170 MIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 M+ LFF RDG ++++ + + LG+ K +R+V R+T G ++A +G Sbjct: 176 MLYLLFFLLRDGRTLARDVRTAVPLGDTTKRRLQIKFTRVV----RATVKGNIVVAAVQG 231 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G W+ G+PS + G + A ++++P GA + + ++ YLL+ G+++ L ++G Sbjct: 232 ALGGLILWVLGLPSPLLWGALMAFLSLLPAVGAGLVWAPMAAYLLLSGSVWQGVTLSVFG 291 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + +VD LRP LVG ++P +GG+ +GL G IGP++ AL W Sbjct: 292 VLVISLVDNILRPILVGKDTRMPDYLILTSTLGGLALLGLNGFVIGPLVAALFVASWN 349 >gi|238025001|ref|YP_002909233.1| hypothetical protein bglu_2g16580 [Burkholderia glumae BGR1] gi|237879666|gb|ACR31998.1| Hypothetical protein bglu_2g16580 [Burkholderia glumae BGR1] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/353 (21%), Positives = 153/353 (43%), Gaps = 25/353 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ + Q ++++ + + + L FF + I+ P+ + + Sbjct: 15 ESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQRWLAAHFGKRRNLA 74 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ +++ + I+PL F+ + E+ + +V + + + +L + + S Sbjct: 75 ALVTLSAIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPN---MTLYLQQVVHALPTS-- 129 Query: 123 WTKHLSHPQSLKILSETFLK-TNGIDFIPRF----ASRFGMIFLDYCLSIIFMIIALFFF 177 + + H L ++ K T+G I +F A G + +S M+ +FF Sbjct: 130 -LQRVLHSYGLADIAGIQKKLTDGAAAISQFVATQAFSIGQNTFQFVVSFGVMLYLVFFL 188 Query: 178 YRDGFSISQQ------LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 RDG I ++ LD +HL + + V+R+T G +A+ +G + G Sbjct: 189 LRDGGEIGRRVRRALPLDEDHKHLLLSKFTT-------VVRATVKGNIAVALVQGALGGV 241 Query: 232 AYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 +W+ G+ + G + A ++++P GA + + ++Y + G I+ L ++ + Sbjct: 242 IFWILGIEGALLWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVIG 301 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +VD LRP LVG K+P +GG+ G+ G IGP++ AL W Sbjct: 302 LVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWD 354 >gi|330503226|ref|YP_004380095.1| hypothetical protein MDS_2312 [Pseudomonas mendocina NK-01] gi|328917512|gb|AEB58343.1| hypothetical protein MDS_2312 [Pseudomonas mendocina NK-01] Length = 361 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 12/317 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F++ + A ++ F SWP+ + A I T + + VPL++L + Sbjct: 22 WVLAPFWSALFWAAVLAFASWPLMRLLTQLLNGRLSLAAGILTGVWVVMVAVPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +K+ + V G+P P WL IP G ELW + +L Sbjct: 82 LADHIKDANALVRDLQVEGLPPPPSWLGSIPLVGDRLVELWRTIDQQGAAFFDTLRPYLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R +++ G ++ LS++ + FFFYRDG ++ + SL E L Sbjct: 142 QVGNWLVAR-SAKIGAGMVELALSLVLV----FFFYRDGPRLAVFVHSLLERLIGERADH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA--MIPGGAPI 260 +V ++ G+ A + ++ + +AGVP + LG++T + MIP P+ Sbjct: 197 YLELVAGTVQRVVNGVIGTAAAQAVLAYIGFVIAGVPGALVLGLLTFAFSFIMIP---PL 253 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +L+ +G I A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 254 IWGPAVAWLVWQGEIGMAIFLGVWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGI 313 Query: 321 RTMGLLGLFIGPVLMAL 337 G +GLF+GP L+A+ Sbjct: 314 LAFGFMGLFLGPTLLAV 330 >gi|288561240|ref|YP_003424726.1| hypothetical protein mru_1984 [Methanobrevibacter ruminantium M1] gi|288543950|gb|ADC47834.1| hypothetical protein mru_1984 [Methanobrevibacter ruminantium M1] Length = 361 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 7/202 (3%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F + + + +I ++++F RDG I + + + A++ + + V++S F G Sbjct: 118 FSNVLIQLFVLICSIYYFTRDGDLIWENIFVFIPNEHKAFFDRTFYEIANVLKSIFYGHF 177 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIY-LLIKGNIFN 277 + A+ G++ G Y+L G + LG+IT I +IP P I + A++IY + + G+I Sbjct: 178 LTAVIIGVMGGVGYYLLGYKFALFLGIITGIFQLIPIFGPWIVYWALAIYAIFVAGDIVQ 237 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A LWG + L + D +RP L +P L G + G G++G +GP+++ + Sbjct: 238 AVLTVLWGFV-LSLSDMYIRPVLASNYADMPSLILLVGFMAGPYVFGIVGFILGPLILGV 296 Query: 338 IAVIWKESIMAIKENKEKISSN 359 + K ++KE EK + N Sbjct: 297 CYAVIK----SLKEELEKDNWN 314 >gi|209695990|ref|YP_002263920.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009943|emb|CAQ80257.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 361 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 88/358 (24%), Positives = 158/358 (44%), Gaps = 50/358 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ +LV+ Y ++ + P++ A I+ P+++ K +S A+++ Sbjct: 11 HWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKSPNSAAILSCT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + +PL F+F +++ SK W+++ GG+ Sbjct: 71 ALTFIIAIPLFFVFV-AIVQQGATFSK---------DAYHWITE--GGI------QTLFQ 112 Query: 129 HPQSLKILS--ETFLKTNGID------FIPRFASRFGMIFLDYCLSII-----------F 169 HP +IL+ L + ID + + AS+ G + I+ Sbjct: 113 HPIVSQILAFINKHLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQILGDATNVLVNFFL 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEG 226 M+ LFF RD ++ S H+ P + R+ + +V +S LG + AI +G Sbjct: 173 MLFVLFFLLRD----QDKIISAFRHVLPLSRSQEDRLLDEIEEVSKSAILGSFLTAIAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 L G A WLAG P + G + + IP G + + +IYLL+ A L +WG Sbjct: 229 LAGGFAMWLAGFPG-LFWGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + +D +RP L+ G + L FF L+GG+ GL+GL GP++ AL V++ Sbjct: 288 VLVVGSIDNIVRPLLMQGNSGMNTLLIFFSLLGGIHLYGLIGLIYGPLIFALTFVLFN 345 >gi|261212265|ref|ZP_05926551.1| predicted permease [Vibrio sp. RC341] gi|260838873|gb|EEX65524.1| predicted permease [Vibrio sp. RC341] Length = 361 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 84/346 (24%), Positives = 151/346 (43%), Gaps = 19/346 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + ++ + ++ A II +PI+ K A ++ V + + ++PLLF Sbjct: 23 LACYWLVEPYINSIVMAFIISLLMFPIHDWLDRKLPSHHNISAFLSCVVLTVIVVIPLLF 82 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS----HPQSLKIL 136 +F + + + + HG + LS P + A L ++L PQ + Sbjct: 83 IFGAIVQQGSKFSQNLYSWVTHG-GIQELLSH-PWVVKALGLANQYLPFEEISPQQIAQR 140 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F T G + + A G + ++ M+ LFF RD ++ S H+ Sbjct: 141 VAQFATTFGSNLVSISAKILGDA-TSFVMNFFLMLFVLFFLLRD----HDKIISAIRHIL 195 Query: 197 PAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P + R+ + V +S +G + AI +G G WLAG P + G + + Sbjct: 196 PLSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTMMGFASF 254 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++YL + G A L +W + +D LRPFL+ G + L Sbjct: 255 IPVVGTALIWIPATLYLFLIGETTWAFFLAIWSIAVVGSIDNLLRPFLMQGSAGMNTLMI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 FF L+GG++ GL+GL GP++ A+ V I++E + + +++ Sbjct: 315 FFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDQ 360 >gi|90413138|ref|ZP_01221134.1| putative permease [Photobacterium profundum 3TCK] gi|90325829|gb|EAS42281.1| putative permease [Photobacterium profundum 3TCK] Length = 361 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 50/358 (13%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 WM++ + +++Y ++ + P++ A II +P++ SK A+++ + Sbjct: 11 HWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLHIRIESKIPSKPNSAAILSCI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++PLL +F +V + ++ W S GG A EL L+ Sbjct: 71 LLTFIIVIPLLIVF-------SSIVHQGTTFSKDSY---TWFSS--GG--AKEL----LA 112 Query: 129 HP--QSLKILSETFLKTNGIDF------IPRFASRFGMIFLD-----------YCLSIIF 169 HP Q + +L + + ID I AS+FG L+ + +S + Sbjct: 113 HPYVQKVLLLIDKWSPFESIDTQAILQKIASAASKFGAQLLNMSAKILGDATNFIISFML 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEG 226 M+ LFF RD ++ + H+ P + + V +V +S LG + A+ +G Sbjct: 173 MLFVLFFLLRD----HAKMVNAVRHVLPLSRSQEDALLTEVEQVAKSAVLGSFLTALAQG 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G A WLAG P + G + A + IP G + + ++YLL+ A L WG Sbjct: 229 FAGGFAMWLAGFPG-LFWGSMMAFASFIPVFGTALIWLPAALYLLLINQWEWALFLSGWG 287 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I + +D LRP L+ G + L FF ++GG+ GL+GL GP++ A+ V++K Sbjct: 288 IIVVGSIDNILRPLLMQGNSGMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFK 345 >gi|300711827|ref|YP_003737641.1| hypothetical protein HacjB3_12330 [Halalkalicoccus jeotgali B3] gi|299125510|gb|ADJ15849.1| hypothetical protein HacjB3_12330 [Halalkalicoccus jeotgali B3] Length = 343 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 2/165 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+ +DG S + L ++ + P +++ ++ ++ +G ++A + ++LG A+ Sbjct: 159 LFYLLKDGESAVEWLRAV-VPIEPDVREELFEETGLLLHNSLVGTAVVAGAQAVLLGVAF 217 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+ + V V T I AM+P GA I + SIYL + G A LF++GAI + V Sbjct: 218 LVLGLGNVVFWIVTTFIAAMVPLLGASIVWIPASIYLFVVGRPVPAVALFVFGAIAISTV 277 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 D LRP ++ +L + T G+ GG+ G +GLFIGPV++ L Sbjct: 278 DNILRPMVMRRGAQLSPVLTIIGIFGGIAVFGFVGLFIGPVVLGL 322 >gi|289548782|ref|YP_003473770.1| hypothetical protein Thal_1011 [Thermocrinis albus DSM 14484] gi|289182399|gb|ADC89643.1| protein of unknown function UPF0118 [Thermocrinis albus DSM 14484] Length = 353 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 21/329 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++LV LY ++ F PVL A++ P+ + + + +S A + V + L ++ Sbjct: 17 LFLMLV-LYIIRPFIVPVLWAVVFTLALHPL-NHLLRRYVKSRFLSAFLLVVLTLLLIVI 74 Query: 77 PLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWAS--ELWTKHLSHPQSL 133 P+ FL + + + +V+ +V A H +S + G S + W +L Q Sbjct: 75 PVSFLGFMLVEQTLHMVNYLVSFAQNH--TYEELISLLKGHPLFSTVQQWLDYLGTQQVR 132 Query: 134 KILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + +I G+I S +F+ I LFF RDG + LD Sbjct: 133 DVFISGVQRVSQWLLQWISSLIGTSGVILFK---SFVFL-ITLFFLLRDG---DRFLDFA 185 Query: 192 GEHL--FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L P I V + I +T G +A+ +G++ Y++AG V LGV T Sbjct: 186 KRFLPIDPHDTDMILYTVYRTILATVYGTVGVAVLQGILSFVGYYVAGFDYAVLLGVATF 245 Query: 250 IMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +P G A + F + S+YLL++G + L ++ + + +D LRPF++ + L Sbjct: 246 FASFVPPFGTASVWFPS-SVYLLLQGKMTEGISLLIYSFLVISSLDNFLRPFIMKFGVPL 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 P++ FF +GG+ G +GLFIGP++ + Sbjct: 305 PYVVLFFSTLGGLAAFGFVGLFIGPMIFS 333 >gi|206601945|gb|EDZ38427.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way CG'] Length = 361 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 25/343 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 M +F+ L L +L AP LSAL I+ F PI++ F+ KK + A++ T+ Sbjct: 23 MALFLCLFGLLYL--IIAPYLSALLWAAILSFAVTPIHA-FLLKKIGRPAWTALLTTLLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-----VLANQHGIPVPRWLSDIP-GGMWASELWT 124 + + PLL L G+ EL+ V L + H VP W++ +P G L T Sbjct: 80 LGFVLAPLLSL---GVPLSHELILAVNGIRTFLEDPHS-KVPDWIARLPLVGSRIDTLLT 135 Query: 125 KHLSHPQSLKILSETFLKTNGI---DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +HP L + + L+T+ + D + A+ G + L ++A F F G Sbjct: 136 GLKTHPIGLDVATAK-LQTHILAFGDQVLSLATNLG----KWFLKFFIFLLAFFAFTLHG 190 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +I L L + + +++P R G+ A+ + ++ +W AG+P+ Sbjct: 191 ETIWATLSRLFTQWAGSRMEIPLKVIPATTRGVLYGVFFTALFQAILSAIGFWGAGLPNV 250 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L I + A+ P GA + + +YL + + A LW + I++ ++P + Sbjct: 251 LLLTTIAFLAALFPIGAVVVWVPSLLYLTVMHHWIAALIFGLWNLLGGGIIEHFIKPMFI 310 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G +PFL G++GG+ GL+GLFIGPV++++ + K Sbjct: 311 GRSSDIPFLAILLGVMGGLEAFGLIGLFIGPVVLSVTLALLKA 353 >gi|152987375|ref|YP_001349002.1| hypothetical protein PSPA7_3648 [Pseudomonas aeruginosa PA7] gi|150962533|gb|ABR84558.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 354 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 76/322 (23%), Positives = 147/322 (45%), Gaps = 16/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASEL---WTKHLSHPQSLKILS 137 + ++ L+ + G+P P W++ +P + L W + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVP--LVGDRLIGWWDSIDQQGVAFFYVL 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ G + R A G I L ++ ++ +FFFYRDG + + E L Sbjct: 137 KPYVGEVGNWLLARSAKIGGGI-----LELVLSLVLIFFFYRDGPRLESIVHRALERLIG 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA--MIP 255 + +V ++ G+ A + L+ + +AGVP + LG++T + + M+P Sbjct: 192 NRAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFTIAGVPGAMLLGLLTFVFSLLMVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + + +L +G+ + L LWG + VD L+P+L+ LP + G Sbjct: 252 ---PLVWGPATAWLFFQGDYGHGIFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLG 308 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 + GG+ G +GLF+GP+L+A+ Sbjct: 309 VFGGLLAFGFMGLFLGPILLAV 330 >gi|258542289|ref|YP_003187722.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633367|dbj|BAH99342.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636426|dbj|BAI02395.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639479|dbj|BAI05441.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256642535|dbj|BAI08490.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256645590|dbj|BAI11538.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256648643|dbj|BAI14584.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256651696|dbj|BAI17630.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654687|dbj|BAI20614.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 363 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 79/345 (22%), Positives = 163/345 (47%), Gaps = 29/345 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF--IVPLLFLFYY 84 L F + +L A ++ +T+WP++ + ++ L T++++C ++PL FL Sbjct: 29 LAPFSSALLWAGVLAYTTWPLFQHLRRRMGPNAASL----TMTLLCAVGVVLPLAFLASA 84 Query: 85 GMLEMKELVSKVV--LANQHGIP-VPRWLSDIPG------GMWASELWTKHLSH-PQSLK 134 + +++ + H +P +P W++ +P W E W++++S L+ Sbjct: 85 CVSSGPRWARQIMTFVGTIHELPPLPHWVTSLPAFGPDISHHW--ERWSRNISSVGDELR 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +++ ++ + R A + L ++ + FFF+ G + + ++ Sbjct: 143 PYAGEIIQSL-LEVLMRMA--------NGALHLVMALFIAFFFWLSGPMLWDTVQAVMVR 193 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + IV +R T G+ AI +G++ G WL GV V LGV+ A +A+ Sbjct: 194 IAGHQAGRHLHIVGSTVRGTVYGILGTAIIQGILTGLGLWLLGVGEAVILGVLAAFLAVF 253 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P GAP+ + +++L + L L+G + + D +RP + KLP+L T Sbjct: 254 PIGAPLVWIPAALWLFGMHHPGKGILLLLYGVLIISGADHLIRPLFIARGSKLPYLLTVL 313 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G +G+F+GP+L+A+ + E A E + ++ + Sbjct: 314 GVIGGLLAFGGVGIFLGPILLAIGFTLTTE--FAADEAAQPLAQD 356 >gi|161521467|ref|YP_001584894.1| hypothetical protein Bmul_4931 [Burkholderia multivorans ATCC 17616] gi|160345517|gb|ABX18602.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] Length = 353 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 14/202 (6%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLGEHLFPAYWKKISRIVPKV 210 G + +S M+ +FF RDG I ++ LD ++L A + V Sbjct: 158 GQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEHKNLLLAKFTT-------V 210 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 +R+T G +A+ +G++ G +W+ G+ V G + A ++++P GA + + ++Y Sbjct: 211 VRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALMAFLSLLPAIGASLVWVPAALYF 270 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L G ++ L + + +VD LRP LVG K+P +GG+ G+ G Sbjct: 271 LATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFV 330 Query: 330 IGPVLMALIAVIWKESIMAIKE 351 IGP++ AL W A +E Sbjct: 331 IGPLVAALFMASWDIYARAEQE 352 >gi|221197138|ref|ZP_03570185.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] gi|221203811|ref|ZP_03576829.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221175977|gb|EEE08406.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221183692|gb|EEE16092.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length = 350 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 14/202 (6%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLGEHLFPAYWKKISRIVPKV 210 G + +S M+ +FF RDG I ++ LD ++L A + V Sbjct: 155 GQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEHKNLLLAKFTT-------V 207 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 +R+T G +A+ +G++ G +W+ G+ V G + A ++++P GA + + ++Y Sbjct: 208 VRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALMAFLSLLPAIGASLVWVPAALYF 267 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L G ++ L + + +VD LRP LVG K+P +GG+ G+ G Sbjct: 268 LATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFV 327 Query: 330 IGPVLMALIAVIWKESIMAIKE 351 IGP++ AL W A +E Sbjct: 328 IGPLVAALFMASWDIYARAEQE 349 >gi|189352364|ref|YP_001947991.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221210990|ref|ZP_03583970.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gi|189336386|dbj|BAG45455.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221169946|gb|EEE02413.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 350 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 14/202 (6%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLGEHLFPAYWKKISRIVPKV 210 G + +S M+ +FF RDG I ++ LD ++L A + V Sbjct: 155 GQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEHKNLLLAKFTT-------V 207 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 +R+T G +A+ +G++ G +W+ G+ V G + A ++++P GA + + ++Y Sbjct: 208 VRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALMAFLSLLPAIGASLVWVPAALYF 267 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L G ++ L + + +VD LRP LVG K+P +GG+ G+ G Sbjct: 268 LATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFV 327 Query: 330 IGPVLMALIAVIWKESIMAIKE 351 IGP++ AL W A +E Sbjct: 328 IGPLVAALFMASWDIYARAEQE 349 >gi|283851814|ref|ZP_06369091.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283572730|gb|EFC20713.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 404 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 12/202 (5%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTI 220 ++ + +I LFF RDG ++ Q +L P + +RI + V +S LG + Sbjct: 166 TMNFVILIFVLFFLIRDGDAMLAQ----ARYLLPLSTDQENRIFRQLDDVAKSVILGAFV 221 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 IA+ +GL G ++ G+ + G + ++IP G I + VSIYL++ G+ Sbjct: 222 IALAQGLAGGIGLFIVGI-NPFFWGFMMGFASLIPVVGTAIIWLPVSIYLMLTGDWQWGL 280 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L +WGA+ + +D +RP L+ K+ F ++GG++ G LG+ GP+++ Sbjct: 281 FLAVWGAVVISSIDSVIRPLLMQNRSKMSTFWVFLAIIGGIKFFGALGILYGPLILGFAM 340 Query: 340 V---IWKESIMAIKENKEKISS 358 V ++ E + E + +++ Sbjct: 341 VMLTLYAEDYRHVLEERNLVTT 362 >gi|167583840|ref|ZP_02376228.1| hypothetical protein BuboB_00802 [Burkholderia ubonensis Bu] Length = 350 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 20/223 (8%) Query: 143 TNGIDFIPRFASRFGMIF----LDYCLSIIFMIIALFFFYRDGFSISQQ------LDSLG 192 T+G I +F + ++ + +S M+ +FF RDG I ++ LD Sbjct: 137 TDGAAQISQFVAAQALVIGQNTFQFVISFGVMLYMVFFLLRDGGEIGRRVRRALPLDDEH 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +HL +S+ V+R+T G +A+ +G + G +W+ G+ V + A ++ Sbjct: 197 KHLL------LSKFT-TVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWSALMAFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + +IY L+ I+ L + + +VD LRP LVG K+P Sbjct: 250 LLPAIGAGLVWVPAAIYFLMIDEIWKCVILVAFCGGVIGLVDNLLRPILVGKDTKMPDWV 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G+ G IGP++ AL W I A E E Sbjct: 310 VLLSTLGGMALFGINGFVIGPLIAALFMASW--DIFARAEQGE 350 >gi|325273487|ref|ZP_08139726.1| hypothetical protein G1E_10548 [Pseudomonas sp. TJI-51] gi|324101378|gb|EGB98985.1| hypothetical protein G1E_10548 [Pseudomonas sp. TJI-51] Length = 290 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 27/279 (9%) Query: 32 APVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 AP +SAL I+ F SWP+ T A + T++ + + +PL++L + Sbjct: 25 APFISALLWGAILAFASWPLMRLLTRVLGGRETLAASLLTMAWILIVALPLVWLGFNLAD 84 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + V G+P P WL +P G W +L + L G Sbjct: 85 HIRDATAFVRDVQVDGLPDAPAWLGGLPFVGERLVSWWQSLDQQGAALLASVKPHLGQVG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYW-- 200 + R +++ G L+ LS++F+ FFFYRDG +S + L L AY+ Sbjct: 145 NWLLAR-SAQIGSGVLELTLSLVFV----FFFYRDGPRLSAFVLRLLHRLMGDRAAYYLE 199 Query: 201 ---KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + R+V VI + + IG + +AGVP + LG++T ++++IP G Sbjct: 200 LVAATVQRVVNGVIGTAAAQALLALIG--------FLIAGVPGAIVLGLVTFMLSLIPMG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P+++ + +L+ KG A L +WG + VD L Sbjct: 252 PPLAWIPATAWLVWKGEYGMAVFLGIWGTFVISGVDNVL 290 >gi|194292237|ref|YP_002008144.1| transmembrane protein [Cupriavidus taiwanensis LMG 19424] gi|193226141|emb|CAQ72088.1| putative transmembrane protein [Cupriavidus taiwanensis LMG 19424] Length = 348 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 2/207 (0%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F+ A G L + + + M+ +FF RDG IS + L A+ +++ Sbjct: 141 QFMAAQAVAIGQNTLQFAVGLGVMLYLVFFLLRDGAMISHRFRE-AMPLSDAHTRRLVGR 199 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V+R+T G ++A +G++ G A+ L G+ + G + A ++++P GA + + Sbjct: 200 FTTVVRATVKGNVVVAAVQGILGGLAFLLLGINGALLWGTLMAFLSLLPAVGAALVWGPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY L+ G + L G + + VD LRP LVG KLP +GG+ G+ Sbjct: 260 AIYFLLAGPAWKGIALIAIGTLVIGAVDNVLRPILVGKDTKLPDWVVLISTLGGMSVFGI 319 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 G IGP++ AL W S++ +++ Sbjct: 320 NGFVIGPLIAALFMSCWHMSVIEDRDD 346 >gi|153010748|ref|YP_001371962.1| hypothetical protein Oant_3427 [Ochrobactrum anthropi ATCC 49188] gi|151562636|gb|ABS16133.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 355 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 14/335 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +++ VL A+I+ P+ A+++ + +CL I+P+L +F + E Sbjct: 26 YYSAVLWAVILAVVFSPVQQRLERLLGGRKNIAALLSVLMCICLVIIPMLAIFGSLVQEG 85 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHL---SHPQSLKILSETFLKTNG 145 L ++ + + ++S I G + S E W + +S ++ + Sbjct: 86 NSLYQRL---SSREFDLNSYISRILGALPDSLEEWLTRFELGDFAEWRARISSAIMQGSQ 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F + S FG L + + M+ LFF +RDG + +++ L Y ++ Sbjct: 143 L-FAGKLVS-FGQNTLQFFIGFGIMLYLLFFLFRDGADLGRKIRQ-AIPLNDDYTRQFLE 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 VIR+T G IIAI +G + G +W GV + + GV+ ++M+P GA + + Sbjct: 200 KFIAVIRATVKGNIIIAIIQGTIGGVTFWSLGVEAALLWGVLMTFLSMLPAVGAALVWVP 259 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G + L G + +VD LRP LVG ++P VGG+ +G Sbjct: 260 AAAWFFASGEWISGGILVFVGVFVIGLVDNLLRPPLVGKGTRMPDYVVLISTVGGISLIG 319 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G +GP++ A+ W S++A +E K S+ Sbjct: 320 INGFVVGPLIAAMFIAAW--SLLA-EEQKGNSSAQ 351 >gi|115376869|ref|ZP_01464091.1| putative exported protein [Stigmatella aurantiaca DW4/3-1] gi|310821801|ref|YP_003954159.1| hypothetical protein STAUR_4552 [Stigmatella aurantiaca DW4/3-1] gi|115366111|gb|EAU65124.1| putative exported protein [Stigmatella aurantiaca DW4/3-1] gi|309394873|gb|ADO72332.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 358 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 131/303 (43%), Gaps = 30/303 (9%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL-------FYYGMLEMKELVSKVVL 98 P+ K + + A + T +V L +VPL + M ++ L+ +V L Sbjct: 48 PVQDFLCRKLKGRKSLCAAVCTATVFLLILVPLAGVGWLVGRELLQLMADLPALLERVDL 107 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 N+ ++++P G+ S + + +LS + S Sbjct: 108 RNE-------LIANLPHGLGRYVRVDPEGSETERV-LLSAAAGGAAIAQHVLNMGS---- 155 Query: 159 IFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + + + M +++++F+ DG F+ + +L L + A+ ++ + + ++ Sbjct: 156 ---ELLIDLFLMTVSMYYFFLDGRRLFAEATRLVPLDKRYIQAFAREFADVAYAIV---- 208 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 G TI A+ +G V + GVP G I A++P GG + + + + LL+ G Sbjct: 209 YGNTITALVQGAVGLVGLLIVGVPHAPVWGAAMVIAALVPVGGTTLVWGPIGLLLLLSGK 268 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + T + WGA + +D +RP L G + L L F + GG+ G++GL +GP++ Sbjct: 269 VGEGTFVLAWGAGVVSTIDNFIRPRLCGSRMALHPLLVFLSMFGGMAVFGMMGLLVGPLI 328 Query: 335 MAL 337 A+ Sbjct: 329 AAI 331 >gi|325958067|ref|YP_004289533.1| hypothetical protein Metbo_0309 [Methanobacterium sp. AL-21] gi|325329499|gb|ADZ08561.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 377 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 7/183 (3%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+F RDG I + L+ + Y+K + + + V++S F G + A G++ G +W Sbjct: 182 FYFARDGDRIWEYLNYIIPDDRKHYFKTLLKEIDLVLKSIFFGHFVTAALTGIISGIGFW 241 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G P + LG +T ++P G P + A+++Y L+ GN A + G + L ++ Sbjct: 242 IMGYPYPLFLGTLTGFFQLMPIIGHWP-TIVALALYDLVIGNFLRAAAVISLGVL-LSLM 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D +RP + G + L G + G +GL+G IGP+++ V + + KEN Sbjct: 300 DMYVRPKVAGKYADIHPLIFLLGFICGPLVLGLVGFIIGPLVL---GVTYAAVVAYKKEN 356 Query: 353 KEK 355 ++K Sbjct: 357 QDK 359 >gi|167566605|ref|ZP_02359521.1| Predicted permease PerM family protein [Burkholderia oklahomensis EO147] gi|167573685|ref|ZP_02366559.1| Predicted permease PerM family protein [Burkholderia oklahomensis C6786] Length = 352 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 16/205 (7%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLFPAY 199 F+ A G + +S M+ +FF RDG I +++ + +HL + Sbjct: 145 QFVATQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLAEDHKQHLLTKF 204 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 V+R+T G +A +G + G +W+ G+ + G + A ++++P GA Sbjct: 205 --------TTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + YL + G I+ L + + +VD LRP LVG K+P +G Sbjct: 257 GLVWVPAAGYLAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G+ G IGP++ AL W Sbjct: 317 GMALFGINGFVIGPLVAALFMASWD 341 >gi|118578847|ref|YP_900097.1| hypothetical protein Ppro_0405 [Pelobacter propionicus DSM 2379] gi|118501557|gb|ABK98039.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 374 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 10/349 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I S + L+ F ++ A +I T+WP+ S + +++ L + Sbjct: 20 IAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLWGKRALAVAAMSAALLLLLV 79 Query: 76 VPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQS 132 +PL + ++V LA P P W+ +P G A T P Sbjct: 80 IPLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPVIGPKLAERWRTLATIDPVE 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L +K + +I M+ + + L++I + Y G + + Sbjct: 140 LSARLAPHVKAI-VGWIVAQTGSVMMMVVQFLLTVIISAV----LYASGEKAAMGVRLFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + S + K IR LG+ + A+ + L+ G L+GVP+ L + I+ Sbjct: 195 HRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGVPAATLLTAVMFILC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L K + + +W A+ + +D +RP L+ LP L Sbjct: 255 VAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVW-AVVVGTMDNFIRPILIKKGADLPLLLI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS-SNF 360 F G++GG+ G++GLFIGPV++A+ + +M + +E + S+F Sbjct: 314 FAGVIGGLIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGSDF 362 >gi|220915912|ref|YP_002491216.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219953766|gb|ACL64150.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 380 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 8/183 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + L + M+IALFFF DG Q+L + + P + +V R+T + A Sbjct: 161 FVLQTVLMLIALFFFLVDG----QRLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATA 216 Query: 223 IGEGLVLGSA---YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 G+ +A Y +A P+ + L V+T ++A+IP GA AV+ L G+ + Sbjct: 217 ATAGIQTVTALAGYLIARAPNPIFLAVLTLVVALIPAVGATAMVLAVAALQLATGHTVSG 276 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L +WGA + +VD RP+L+ G + L FF L+GG+ G +GL +GP+++ + Sbjct: 277 IFLAIWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAAFGGIGLILGPLVVTFL 336 Query: 339 AVI 341 + Sbjct: 337 VTV 339 >gi|148254442|ref|YP_001239027.1| hypothetical protein BBta_2998 [Bradyrhizobium sp. BTAi1] gi|146406615|gb|ABQ35121.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 359 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 81/341 (23%), Positives = 155/341 (45%), Gaps = 22/341 (6%) Query: 16 IMFIILVSLYFLKG-----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++LV++ G F+ VL L+ P++ A + + V Sbjct: 8 VLLVLLVAITLTLGWILLPFYGAVLWGLVGAVVFAPLHRRLARSMHGRDGLAAAVVVLLV 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTK-HL 127 + + I+PL + G ++ A + + ++ + + W +L + L Sbjct: 68 VLIVIIPLSLI---GAALAQQATGVYAQAQSGQLDIGQYFQKMMEALPTWVVDLLNRFGL 124 Query: 128 SHPQSLKI-LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 LK LS L+ G I A G ++ +++ M+ LFF RD ++S+ Sbjct: 125 GSLAGLKDRLSAVLLR--GSQMIAGQALNIGQGTFEFFVNLFLMLYLLFFLLRDQDALSE 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + P ++ + ++ K VIR+T G ++A+ +G + G +W G+ + + Sbjct: 183 RIAT----AIPLRTEQRNALLHKFTVVIRATVKGNLVVALAQGALGGLIFWFLGITAPLL 238 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+ A ++++P GA + + V++YLL G I++ L +GA+ + +VD LRP LVG Sbjct: 239 WAVVMAFLSLLPAVGAGLVWFPVALYLLATGAIWHGVILIAYGALVIGLVDNLLRPILVG 298 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 K+P +GG+ GL G IGP + A+ IW Sbjct: 299 QDTKMPDYVVLISTLGGIEAFGLNGFIIGPAMAAMFIAIWS 339 >gi|86157174|ref|YP_463959.1| hypothetical protein Adeh_0747 [Anaeromyxobacter dehalogenans 2CP-C] gi|85773685|gb|ABC80522.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 381 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 8/183 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + L + M+IALFFF DG Q+L + + P + +V R+T + A Sbjct: 162 FVLQTVLMLIALFFFLTDG----QRLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATA 217 Query: 223 IGEGLVLGSA---YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 G+ +A Y +A P+ + L V+T ++A+IP GA AV+ G+ + Sbjct: 218 ATAGIQTVTALAGYLIARAPNPIFLAVLTLVVALIPAVGATAMVLAVAALQFATGHTVSG 277 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L +WGA + +VD RP+L+ G ++L FF L+GG+ G +GL +GP+++ + Sbjct: 278 IFLAIWGAAVVSLVDNVARPYLLKGGMELHGGVVFFALLGGLAAFGGIGLILGPLVVTFL 337 Query: 339 AVI 341 + Sbjct: 338 VTV 340 >gi|317047887|ref|YP_004115535.1| hypothetical protein Pat9b_1663 [Pantoea sp. At-9b] gi|316949504|gb|ADU68979.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 370 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 19/272 (6%) Query: 99 ANQHGIPVPR--WLSDIPGGMWASELWTKH--LSHPQSLKILSET---FLKTNGIDFIPR 151 A Q + VP+ WL ++P M +L++ + L I+S+ +T G F Sbjct: 100 ATQGHLAVPQLDWLKEVP--MVGDKLFSSYHKLVDGGGSAIMSKLQPYIGRTTG--FFVA 155 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A FG L L ++F ++ Y G + Q + + + + I Sbjct: 156 QAGHFGRFMLHLALMLLFSVL----LYWRGEQVGQGIRHFAYRMGGRRGDAAVLLAGQAI 211 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ +G++ G ++G+P L V+ + ++ G I I+L Sbjct: 212 RAVALGVVVTALVQGVLGGIGLAISGIPYATLLTVVMILSCLVQLGPLIVLVPAIIWLYW 271 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D LRP L+ LP + G++GG+ G++GLFIG Sbjct: 272 SGDTTWGTVLLIWSCV-VGTLDNVLRPMLIRMGADLPMILILSGVIGGLVAFGMIGLFIG 330 Query: 332 PVLMAL---IAVIWKESIMAIKENKEKISSNF 360 PV++A+ + +W A ++ E + Sbjct: 331 PVVLAVSYRLVSVWMHEAPAPDDDPETVVEEL 362 >gi|227540180|ref|ZP_03970229.1| transmembrane protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240041|gb|EEI90056.1| transmembrane protein [Sphingobacterium spiritivorum ATCC 33300] Length = 354 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 88/163 (53%), Gaps = 4/163 (2%) Query: 185 SQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S++++S H P + + + V ++RS +G+ I+A+ +G V YW GV + Sbjct: 169 SKRMESTIYHAIPFSTQSKNELWTEVNMMVRSNAIGIPILALCQGFVAMIGYWFLGVENP 228 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G +TA+ +IP G + +SI+L G I N L L+G I + +D LR + Sbjct: 229 ILWGGMTAVSTIIPVLGTMTVYVPLSIFLFANGQIGNGIGLLLYGFIVIGGIDNVLRFTI 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +P L T FG++ G++ G+LG+ GP++++ + V+ K Sbjct: 289 LKKLGDVPPLITVFGVLLGLKLFGMLGVIFGPLILSSVGVLLK 331 >gi|300771905|ref|ZP_07081776.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Sphingobacterium spiritivorum ATCC 33861] gi|300761291|gb|EFK58116.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Sphingobacterium spiritivorum ATCC 33861] Length = 354 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 88/163 (53%), Gaps = 4/163 (2%) Query: 185 SQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S++++S H P + + + V ++RS +G+ I+A+ +G V YW GV + Sbjct: 169 SKRMESTIYHAIPFSPQSKNELWTEVNMMVRSNAIGIPILALCQGFVAMVGYWFLGVENP 228 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G +TA+ +IP G + +SI+L G I N L L+G I + +D LR + Sbjct: 229 ILWGGMTAVSTIIPVLGTMTVYVPLSIFLFANGEIGNGIGLLLYGFIVIGGIDNVLRFTI 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +P L T FG++ G++ G+LG+ GP++++ + V+ K Sbjct: 289 LKKLGDVPPLITVFGVLLGLKLFGMLGVIFGPLILSSVGVLLK 331 >gi|167850688|ref|ZP_02476196.1| Predicted permease PerM family protein [Burkholderia pseudomallei B7210] Length = 352 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 18/216 (8%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLFPAY 199 F+ A G + +S M+ +FF RDG I +++ + +HL + Sbjct: 145 QFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKF 204 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 V+R+T G +A +G + G +W+ G+ + G + A ++++P GA Sbjct: 205 --------TTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + Y + G I+ L + + +VD LRP LVG K+P +G Sbjct: 257 GLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+ G IGP++ AL W I A E + Sbjct: 317 GMALFGINGFVIGPLVAALFMASW--DIFARTEQTD 350 >gi|53716720|ref|YP_105073.1| hypothetical protein BMAA0253 [Burkholderia mallei ATCC 23344] gi|67643155|ref|ZP_00441903.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121597560|ref|YP_991032.1| hypothetical protein BMASAVP1_1436 [Burkholderia mallei SAVP1] gi|124382408|ref|YP_001025433.1| hypothetical protein BMA10229_1633 [Burkholderia mallei NCTC 10229] gi|126442642|ref|YP_001063635.1| hypothetical protein BURPS668_A2642 [Burkholderia pseudomallei 668] gi|126446184|ref|YP_001077494.1| hypothetical protein BMA10247_A0289 [Burkholderia mallei NCTC 10247] gi|126456863|ref|YP_001076534.1| hypothetical protein BURPS1106A_A2503 [Burkholderia pseudomallei 1106a] gi|134278524|ref|ZP_01765238.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167002310|ref|ZP_02268100.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167724720|ref|ZP_02407956.1| Predicted permease PerM family protein [Burkholderia pseudomallei DM98] gi|167743670|ref|ZP_02416444.1| Predicted permease PerM family protein [Burkholderia pseudomallei 14] gi|167820858|ref|ZP_02452538.1| Predicted permease PerM family protein [Burkholderia pseudomallei 91] gi|167829215|ref|ZP_02460686.1| Predicted permease PerM family protein [Burkholderia pseudomallei 9] gi|167899287|ref|ZP_02486688.1| Predicted permease PerM family protein [Burkholderia pseudomallei 7894] gi|167907623|ref|ZP_02494828.1| Predicted permease PerM family protein [Burkholderia pseudomallei NCTC 13177] gi|167915960|ref|ZP_02503051.1| Predicted permease PerM family protein [Burkholderia pseudomallei 112] gi|167923807|ref|ZP_02510898.1| Predicted permease PerM family protein [Burkholderia pseudomallei BCC215] gi|217422033|ref|ZP_03453536.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226195553|ref|ZP_03791140.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237508341|ref|ZP_04521056.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|242313791|ref|ZP_04812808.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177421|ref|ZP_04884077.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254184824|ref|ZP_04891413.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254186044|ref|ZP_04892562.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254194276|ref|ZP_04900708.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254203008|ref|ZP_04909370.1| putative membrane protein [Burkholderia mallei FMH] gi|254208340|ref|ZP_04914689.1| putative membrane protein [Burkholderia mallei JHU] gi|254263546|ref|ZP_04954411.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254301103|ref|ZP_04968547.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|52422690|gb|AAU46260.1| putative membrane protein [Burkholderia mallei ATCC 23344] gi|121225358|gb|ABM48889.1| putative membrane protein [Burkholderia mallei SAVP1] gi|126222133|gb|ABN85638.1| putative membrane protein [Burkholderia pseudomallei 668] gi|126230631|gb|ABN94044.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126239038|gb|ABO02150.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134250308|gb|EBA50388.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147746053|gb|EDK53131.1| putative membrane protein [Burkholderia mallei FMH] gi|147751027|gb|EDK58095.1| putative membrane protein [Burkholderia mallei JHU] gi|157811370|gb|EDO88540.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157933730|gb|EDO89400.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698461|gb|EDP88431.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169651027|gb|EDS83720.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184215416|gb|EDU12397.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217394264|gb|EEC34283.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225932038|gb|EEH28038.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|235000546|gb|EEP49970.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|238524422|gb|EEP87855.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|242137030|gb|EES23433.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243061963|gb|EES44149.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254214548|gb|EET03933.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|261826786|gb|ABN00128.2| putative membrane protein [Burkholderia mallei NCTC 10229] Length = 352 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 18/216 (8%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLFPAY 199 F+ A G + +S M+ +FF RDG I +++ + +HL + Sbjct: 145 QFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKF 204 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 V+R+T G +A +G + G +W+ G+ + G + A ++++P GA Sbjct: 205 --------TTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + Y + G I+ L + + +VD LRP LVG K+P +G Sbjct: 257 GLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+ G IGP++ AL W I A E + Sbjct: 317 GMALFGINGFVIGPLVAALFMASW--DIFARTEQTD 350 >gi|237747158|ref|ZP_04577638.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378509|gb|EEO28600.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 359 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 4/151 (2%) Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 +++ IR+T G +A +G + G +W+ G+P+ + G I I+++IP GA I + Sbjct: 208 KVISTTIRATVFGTIAVAAVQGSLAGFMFWMLGLPAPLLWGAIMTILSIIPLLGAYIIWL 267 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 SIYL + GN+ L WG + VD L P L+ ++L + F L GG+ Sbjct: 268 PASIYLALDGNLMYGLILAGWGMFVVGTVDNLLYPILISKKLRLHTVVAFISLAGGILVF 327 Query: 324 GLLGLFIGPVLM---ALIAVIWKESIMAIKE 351 G G+ +GP+ + A + +W+ + ++ Sbjct: 328 GAAGIVLGPITLTASAYLMHLWRSRTVESRK 358 >gi|53722867|ref|YP_111852.1| hypothetical protein BPSS1848 [Burkholderia pseudomallei K96243] gi|52213281|emb|CAH39324.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 18/216 (8%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLFPAY 199 F+ A G + +S M+ +FF RDG I +++ + +HL + Sbjct: 157 QFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKF 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 V+R+T G +A +G + G +W+ G+ + G + A ++++P GA Sbjct: 217 --------TTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGA 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + Y + G I+ L + + +VD LRP LVG K+P +G Sbjct: 269 GLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLG 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+ G IGP++ AL W I A E + Sbjct: 329 GMALFGINGFVIGPLVAALFMASW--DIFARTEQTD 362 >gi|260771830|ref|ZP_05880748.1| hypothetical protein VIB_000268 [Vibrio metschnikovii CIP 69.14] gi|260613122|gb|EEX38323.1| hypothetical protein VIB_000268 [Vibrio metschnikovii CIP 69.14] Length = 285 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 8/170 (4%) Query: 193 EHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 H+ P + K+ + +V +S +G + AI +G+ G A WL G+P + G + Sbjct: 116 RHILPLSRSQEDKLLHEIQQVSKSAIMGSFLTAIAQGVAGGLAMWLVGLPG-LFWGTMMG 174 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP G + + ++YLL+ G+ A L +W + +D LRP L+ G + Sbjct: 175 FASFIPLIGTALIWIPATLYLLVIGDTAWALFLLIWSIAIVGSIDNLLRPLLMQGSAGMN 234 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 L FF L+GG++ GL+GL GP++ A+ V +++E + K++ Sbjct: 235 TLMIFFSLLGGIQLFGLIGLIYGPLIFAITIVLFNLYEEEFASFLNQKDR 284 >gi|76818196|ref|YP_336095.1| PerM family permease [Burkholderia pseudomallei 1710b] gi|76582669|gb|ABA52143.1| Predicted permease PerM family [Burkholderia pseudomallei 1710b] Length = 374 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 10/212 (4%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F+ A G + +S M+ +FF RDG I +++ P + + Sbjct: 167 QFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRV----RRALPLDEEHKQHL 222 Query: 207 VPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + K V+R+T G +A +G + G +W+ G+ + G + A ++++P GA + + Sbjct: 223 LTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVW 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + Y + G I+ L + + +VD LRP LVG K+P +GG+ Sbjct: 283 VPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G IGP++ AL W I A E + Sbjct: 343 FGINGFVIGPLVAALFMASW--DIFARTEQTD 372 >gi|167840497|ref|ZP_02467181.1| Predicted permease PerM family protein [Burkholderia thailandensis MSMB43] Length = 352 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 2/198 (1%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F+ A G + +S M+ +FF RDG I +++ L A+ + + Sbjct: 145 QFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRR-ALPLNEAHKQHLLTK 203 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V+R+T G +A +G + G +W+ G+ + G + A ++++P GA + + Sbjct: 204 FTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWVPA 263 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + Y + G ++ L + + +VD LRP LVG K+P +GG+ G+ Sbjct: 264 AGYFAVTGQVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGI 323 Query: 326 LGLFIGPVLMALIAVIWK 343 G IGP++ AL W Sbjct: 324 NGFVIGPLVAALFMASWD 341 >gi|224825906|ref|ZP_03699010.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] gi|224602130|gb|EEG08309.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] Length = 360 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 9/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMC 72 ++ ++ L + F + A+II ++WP+Y + + L V+ + + Sbjct: 19 IVALLVWACLQVILPFLGALTWAVIIAISAWPLYQRLTQCLRGRGNLAALLVVLLLGLAL 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 + L+ L L ++ LAN P P WL IP G ++ W + Sbjct: 79 AVPLGLMVLTLTDTLPHLNGIAHG-LANFTLPPPPAWLGKIPLTGEALTQYWVTAQTDLP 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + ++ + + R G + L I+ II +G ++ + + + Sbjct: 138 GLLARLKPWINQGALWLLGR-----GAMLGVSLLEIVMAIIVAGLLLANGEALWRIAERV 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L A ++ ++V + IR G+ A+ + ++ +AGVP +ALG + ++ Sbjct: 193 INKLGGASASELPQVVARTIRGVTTGVVGTALAQTILCVIGLLIAGVPGALALGFLCFVI 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+ + + + ++ G L LWG + + +D L+P L+ KLP Sbjct: 253 AVAQLPTLLVWLPAAGWVFYTGATGMGVFLLLWGFLLVNTIDNVLKPLLISQGAKLPLSL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMAL 337 F G++GG+ G++GLFIGP L+A+ Sbjct: 313 IFLGVIGGLLAWGIIGLFIGPTLLAI 338 >gi|37526518|ref|NP_929862.1| putative inner membrane protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785949|emb|CAE15001.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 369 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 8/322 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I+ S + +K F + A ++ +WP+ I T+ ++ LF++P Sbjct: 22 LLIVTSFWVIKPFIFGFVWAGMVVIATWPLLEKLQDSLWGKRWIAVSIMTLLLILLFVIP 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + L + L+ + IP WL+ IP G W ++ ++ I Sbjct: 82 IALLVSSLLENSAPLIQWTKSPSHFQIPTMTWLNSIPLVGDKLYSAWNSLITDGGNVLIA 141 Query: 137 S-ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ F + A+ G CL ++F ++ Y G ++ + L Sbjct: 142 KVQPYVGEAATWFFTQ-AANAGRFVFHLCLMVLFSVL----LYLKGEQVTMSIRHFAIRL 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + IR+ LG+ + A+ + ++ G ++G+P L V+ + + Sbjct: 197 ANKRGDAAILLAAQSIRAVALGVVVTALVQAIIGGLGLAVSGIPYATLLTVLMFVCCVAQ 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + +L G+ T L +W I + +D LRPFL+ LP G Sbjct: 257 LGPLLILVPAVAWLYWTGDTTWGTVLLVWSCI-VTTMDGFLRPFLIRLGADLPMALILIG 315 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 ++GG+ + G++GLFIGPV++A+ Sbjct: 316 VIGGILSFGMIGLFIGPVVLAV 337 >gi|302342979|ref|YP_003807508.1| hypothetical protein Deba_1546 [Desulfarculus baarsii DSM 2075] gi|301639592|gb|ADK84914.1| protein of unknown function UPF0118 [Desulfarculus baarsii DSM 2075] Length = 366 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 27/341 (7%) Query: 13 RW----MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 RW I+F++ + ++ F + A+++ P+Y + + + + + Sbjct: 13 RWFFAACILFVLYCAYLLVEPFLTSIFLAIVLVVVGGPVYDLMLKLTRQRRGLASALTCL 72 Query: 69 SVMCLFIVPLLFL---FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT- 124 + + +VPL+ + L++ VS ++ N + + + E T Sbjct: 73 LFILIIVVPLVLITGVITSQALDLYNTVSAMLAGNSLSEMFNSGMGRLGPFLDKLEEHTG 132 Query: 125 ----KHLSHP-QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L H ++LK +S L +N D + R A+ + F M+ F+ Sbjct: 133 ITRMDILQHAAEALKYVSN-LLYSNLTDLL-RGATNLAIGF-------ALMMFVAFYLLM 183 Query: 180 DGFSISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG S++Q+ L PA +I + +R+T G +A+ +G G + + GV Sbjct: 184 DGQSMAQKAIRLSP--LPADTTNQIRDDILSTLRTTMRGTVFLAVIQGTAGGLGFGVFGV 241 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G + +++P G + F YL++ G++F + +W I D LR Sbjct: 242 PHALFWGTVMVFASVVPLVGTALLFIPAGTYLILSGDVFQGVGVMIWCEASQVICDNFLR 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 P L+GG P L TFF ++GG+ G++GL +GP+++A++ Sbjct: 302 PRLIGGGNIHPLL-TFFSVLGGLSVFGMVGLILGPLVLAVL 341 >gi|83718340|ref|YP_438729.1| hypothetical protein BTH_II0529 [Burkholderia thailandensis E264] gi|167577075|ref|ZP_02369949.1| hypothetical protein BthaT_02997 [Burkholderia thailandensis TXDOH] gi|167615244|ref|ZP_02383879.1| hypothetical protein BthaB_03087 [Burkholderia thailandensis Bt4] gi|257141807|ref|ZP_05590069.1| hypothetical protein BthaA_21719 [Burkholderia thailandensis E264] gi|83652165|gb|ABC36229.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 352 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 18/216 (8%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-------DSLGEHLFPAY 199 F+ A G + +S M+ +FF RDG I +++ + +HL + Sbjct: 145 QFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKF 204 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 V+R+T G +A +G + G +W+ G+ + G + A ++++P GA Sbjct: 205 --------TTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + Y + G ++ L + + +VD LRP LVG K+P +G Sbjct: 257 GLVWVPAAGYFAVTGQVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+ G IGP++ AL W I A E + Sbjct: 317 GMALFGINGFVIGPLVAALFMASW--DIFARTEQTD 350 >gi|117620860|ref|YP_858434.1| hypothetical protein AHA_4000 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562267|gb|ABK39215.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 359 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 148/328 (45%), Gaps = 20/328 (6%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I+ L+ F ++ A +I +WP+ A+ T+ ++ +F++P Sbjct: 18 LLIVSCFMVLRPFLPALVWATMITIATWPLMLMVQRLLWGKRALAALSMTLVLLLMFVIP 77 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPR--WLSDIP--GGMWASELWTKHLSHPQSL 133 L F+ + E ++ ++ H P P WL +P GG + W + L+ + Sbjct: 78 L-FMALANVAEKAPMLIELGTTISHS-PPPELLWLQQVPLVGGK-LYDFWQQILASGGQV 134 Query: 134 --KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L+ F +T ++ A G++F+ + L++ I L Y G ++ + Sbjct: 135 LFAKLAPYFGQTA--RWLASQAGNLGLLFVHFLLTV--GICGLL--YHSGEVVATGIRRF 188 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--A 249 L + + + IR+ +G+ + A+ + V G +AG+P + L V+ Sbjct: 189 AHRLAGERGDNATVLASQAIRAVAMGVVVTALVQSSVAGLGLLIAGIPYTMILVVVMFLL 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+A I G P+ V YL G+ T L +W + +D LRPFL+ LP Sbjct: 249 IVAQI-GPFPVLLACVG-YLYWSGDTTWGTFLLVWSLLA-GTMDNFLRPFLIKRGADLPL 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + G++GG+ MG++GLFIGPV++A+ Sbjct: 306 ILILVGVIGGLLAMGIIGLFIGPVVLAV 333 >gi|239906620|ref|YP_002953361.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239796486|dbj|BAH75475.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 370 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 31/341 (9%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEE----SSTFLAVIATVSVMCLFIVPLLF----LFY 83 AP ++ LIIG ++ + E T A++ T + I+P+ F L Sbjct: 29 APFVNILIIGVVLAALFRPVQRRVERLCGPRPTLAALLTTGLIFTCIIIPIFFFLGSLLA 88 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE----LWTKHLSHPQSLKILSET 139 G+ + L +++ + + + +S P W E L K L+ L +S Sbjct: 89 QGVQSVNALQAQLAATDFNKLFSHEAIS--PYMDWVQEHLPFLDLKKLALQADLIDIS-- 144 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 KT G I G +F+ ++ + ++ LFF RDG + Q+L +L P Sbjct: 145 --KTAGQMLIDSGTKIIGNVFV-LTMNFVILMFVLFFLIRDGERMMQRL----RYLLPLT 197 Query: 200 WKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + +RI + V +S LG IA+ +GL G ++ G+ G + ++IP Sbjct: 198 TDQENRIFRQLDDVAKSVILGAFFIALAQGLAGGIGLFIVGIKPFF-WGCMMGFASLIPV 256 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G I + V+IYL++ G+ L WGA+ + +D +RP L+ + F Sbjct: 257 VGTAIIWLPVAIYLMLTGHWQWGLFLMGWGAVVVSGIDSIIRPLLMQNRSNMSTFWVFLS 316 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENK 353 ++GG++ G LG+ GP+++ V ++ E + E + Sbjct: 317 IIGGIKFFGALGILYGPLILGFAMVMLTLYAEDYRHVLEER 357 >gi|15606132|ref|NP_213509.1| hypothetical protein aq_740 [Aquifex aeolicus VF5] gi|8928496|sp|O66948|Y740_AQUAE RecName: Full=UPF0118 membrane protein aq_740 gi|2983326|gb|AAC06916.1| hypothetical protein aq_740 [Aquifex aeolicus VF5] Length = 353 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 28/319 (8%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A++ G +P+Y FI +K +S A + V+ ++P + ++ +++ Sbjct: 30 PIVWAIVFGIVLYPLYG-FIKRKLKSENLAAFLVIFIVLVAIVIPFTI---FAVITAQQI 85 Query: 93 VS---KVV-LANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT--NG 145 + KVV H + + L +IP E L++ QS E F + N Sbjct: 86 IVFSIKVVNFVQTHSVNDLINSLKEIPFLKEKRESLEPLLNYLQS-----EEFRRALINA 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMI----IALFFFYRDGFSISQQLDS---LGEHLFPA 198 ++ I F ++ + +F + + LFF RDG + +++ + + Sbjct: 141 LNSILTFVGDRLRSYVYTAGTSLFHVFVFLLTLFFILRDGEKVLKEIINSIPMKREDLEE 200 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 K I R V VI T +G A+ + ++ Y LAGV + +IT A +P G Sbjct: 201 ILKTIYRTVLAVIYGT-VGT---AVAQSIMGFIGYSLAGVEFALIWALITFFAAFVPPFG 256 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A + + IYL I L +G + +D +RP ++ IKLP++ FF + Sbjct: 257 AAFVWVPMDIYLFTTKGIKEGLILLFFGTFLISTMDNIVRPLVMKQGIKLPYVALFFSTI 316 Query: 318 GGVRTMGLLGLFIGPVLMA 336 GG+ G +G+F+GP++++ Sbjct: 317 GGLIKFGFIGVFLGPIILS 335 >gi|327393717|dbj|BAK11139.1| UPF0118 inner membrane permease protein YdiK [Pantoea ananatis AJ13355] Length = 376 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 67/325 (20%), Positives = 137/325 (42%), Gaps = 19/325 (5%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 +WP+ + ++ T+ ++ LFI+P+ L + +++ H Sbjct: 57 ATWPLMLKIQRLLWGRRSLAVIVMTILLLLLFIIPVALLVNSLIDNSAPVIAWA--TQGH 114 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLS-----HPQSLKILSETFLKTNGIDFIPRFASRFG 157 +P WL+DIP M +L+ + + L +T G F A FG Sbjct: 115 MLPTLSWLNDIP--MVGEKLYASYQKLVAGGGAAIMAKLQPYVGRTTG--FFVAQAGHFG 170 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + + ++F ++ Y G +Q + + + + +R+ LG Sbjct: 171 RFMIHLAVMLLFSVL----LYWRGEQAAQGIRHFAWRMAGRRGDAAVLLAGQAVRAVALG 226 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 + + A+ +G++ G ++G+P L V+ + ++ G + +YL G+ Sbjct: 227 VVVTALVQGVLGGIGLAVSGIPYATLLTVLMILCCLVQIGPLLVLVPAIVYLYWSGDTTW 286 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 T L +W + + +D LRP L+ LP + G++GG+ G++GLFIGPV++A+ Sbjct: 287 GTVLLIWSCV-VGTLDNILRPVLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAV 345 Query: 338 ---IAVIWKESIMAIKENKEKISSN 359 + +W + A + + + S Sbjct: 346 SYRLVSVWMHEVPAPQADPLSVVSE 370 >gi|78188186|ref|YP_378524.1| hypothetical protein Cag_0203 [Chlorobium chlorochromatii CaD3] gi|78170385|gb|ABB27481.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 362 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 43/360 (11%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F ++ + L A + SAL + P+Y+ F + A++ ++++ + ++ Sbjct: 22 LFFTMIRYFLLVVVLAAIFSAL-----AMPVYNRFERGLRGKRSLSAIMTLLTLLFIVVL 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 PL L + + L + V Q + P H QSL Sbjct: 77 PLAILLGLVVKQAIRLSNVAVPFVQEQLLTPSQFDH----------------HLQSLFFY 120 Query: 137 SETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMII-----------ALFFFYRDGFSI 184 E L I + A++FG + + S + + +FFF RDG Sbjct: 121 PELVLYREEILQKVSELATKFGTLLFNAISSFTYSAVTEIVLFFVFLYTMFFFLRDG--- 177 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 Q L S+ L P R++ K V R+T G ++ + +G + G A ++AG+ S Sbjct: 178 KQMLQSMLA-LLPLSHTDQYRLLDKFLSVTRATLKGSLVVGMVQGSLAGMALYMAGIESA 236 Query: 242 VALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + +++IP G A + AV IYL G+ A + L+ I + +D +RP Sbjct: 237 LFWGTVMSFLSLIPVLGSALVWIPAV-IYLATIGSYPQALGVLLFCMIVVGQIDNIIRPI 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVG ++ L FFG +GG+ G G+ +GP++ AL IW+ + + I N Sbjct: 296 LVGRDTQMHELLIFFGTLGGIGMFGFFGVILGPIVAALFTTIWEMYAESFGDYLSTIQKN 355 >gi|218778346|ref|YP_002429664.1| hypothetical protein Dalk_0489 [Desulfatibacillum alkenivorans AK-01] gi|218759730|gb|ACL02196.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 356 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 102/198 (51%), Gaps = 11/198 (5%) Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLG 217 L + L+ +FM++ +FF DG + L + P + ++V K + + LG Sbjct: 162 LSFVLNFLFMVLIIFFILIDGGKLVDYLVDMS----PLPQDQDEKLVAKFKDMSGAVILG 217 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIF 276 + + +G++ G+ + L G+PS GV+ I+A +P G + F +I + I+G I Sbjct: 218 NGVCGLAQGILGGAVFALFGLPSPFLWGVVMGILAFLPIVGIGVVFLPAAIIMFIQGKIA 277 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 ++ +I F V+ ++P LVG +++ L F ++GG++ G+LG+ GP+++ Sbjct: 278 TGVFFIIFYSILSFSVEYVIKPKLVGDRVQMHPLLVFLAIMGGLKIFGILGVIYGPLIVT 337 Query: 337 L---IAVIWKESIMAIKE 351 +A I++ S AI E Sbjct: 338 FFLTLADIYRASYKAIVE 355 >gi|262274963|ref|ZP_06052774.1| putative permease [Grimontia hollisae CIP 101886] gi|262221526|gb|EEY72840.1| putative permease [Grimontia hollisae CIP 101886] Length = 360 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 2/136 (1%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 KV +S LG + A+ +GLV G A WLAG + + G + A + IP G + + + Sbjct: 210 KVAKSAVLGSFLTALAQGLVGGFAMWLAGF-AGLFWGTMMAFASFIPVVGTALIWVPAAT 268 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL + G A L WG I + +D LRP L+ G + L FF L+GG+ GL+G Sbjct: 269 YLFLIGQWEWAAFLAGWGVIVVGSIDNLLRPLLMQGNSGMNTLLIFFSLIGGLHVYGLMG 328 Query: 328 LFIGPVLMALIAVIWK 343 L GP++ +L V+++ Sbjct: 329 LIYGPIIFSLTLVLFR 344 >gi|253700636|ref|YP_003021825.1| hypothetical protein GM21_2015 [Geobacter sp. M21] gi|251775486|gb|ACT18067.1| protein of unknown function UPF0118 [Geobacter sp. M21] Length = 354 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 78/340 (22%), Positives = 150/340 (44%), Gaps = 31/340 (9%) Query: 30 FFAPVLS----ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F AP+L ALIIG + P Y +++ + + + ++V ++P +L Sbjct: 25 FAAPILKPLAWALIIGIATMPHYQRILNRFPDRPGRASGLMLLAVAVCLVLPASWLVITA 84 Query: 86 ML-------EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++++++ +V + LS IP + + +S + I Sbjct: 85 AVNAPEWYRQLEQMIQEVTRTSSGA------LSQIP-------YYDRIMSLVERFGIDLG 131 Query: 139 TF---LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQLDSLGEH 194 + ++G I A+ D+ +++ + LFF YRDG +++ + L + Sbjct: 132 NIGGKIASSGSTVILNAATNMVRNLFDFIFTLLVALFLLFFIYRDGERAVALCIGKLAPN 191 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 P + + + + + +G + +G++ G YW+AGVP+ V +TAI A+I Sbjct: 192 --PRKAQHYATQIRSITTAVAVGTILTCCTQGVIAGLGYWVAGVPAPVFFAALTAIAALI 249 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G I + + + G+ A L LW + D +RP +G + L Sbjct: 250 PVVGTAIIWVPIVALTAVTGSYLTALLLALWCVFFVGFSDNAIRPLAIGAASDISVLAVV 309 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + GV MGLLGL IGPV+ A++ +W +++ A + + Sbjct: 310 TGALCGVVMMGLLGLIIGPVIFAVLFSMWDDAVSAAGDTE 349 >gi|290475511|ref|YP_003468399.1| putative transport protein [Xenorhabdus bovienii SS-2004] gi|289174832|emb|CBJ81633.1| putative transport protein [Xenorhabdus bovienii SS-2004] Length = 369 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 76/341 (22%), Positives = 140/341 (41%), Gaps = 22/341 (6%) Query: 34 VLSALIIGF--------TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 VLS ++GF +WP+ I T+ ++ LF++P+ L Sbjct: 30 VLSPFVLGFIWSGMVVIATWPLLEKLQQHLWGKRWIAVSIMTLLLVLLFVIPIALLVSSL 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + L+ + +P WLS IP + +L+ K Q L T Sbjct: 90 LENSTPLIEWAKSPSTFQLPQLEWLSRIP--VIGEDLYVKW----QDTVADGSNILLTKI 143 Query: 146 IDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +I + A+ F + + ++ M++ Y G + + L Sbjct: 144 PPYIGKTATWFFTQAANAGRFLFHLVLMVLFSVLLYWKGEQVMLSIRHFAIRLADQRGDA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + IR+ LG+ + A+ + + G +AG+P + L V+ I + G + Sbjct: 204 VVLLAAQSIRAVALGVVVTALVQAIAGGIGLAIAGIPYAMILTVLMFICCVAQLGPLLVL 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +L G T L +W + L +D LRPFL+ LP + G++GG+ + Sbjct: 264 VPSIAWLYWTGETTWGTVLVIWSLV-LTTMDGVLRPFLIRLGADLPMVLILTGVIGGILS 322 Query: 323 MGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKISSNF 360 +GL+GLFIGPV++A+ + + W + ENK + + + Sbjct: 323 LGLIGLFIGPVVLAVSYRLLLAWMNEVPK-PENKTEDTEKY 362 >gi|312881082|ref|ZP_07740882.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] gi|310784373|gb|EFQ24771.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] Length = 370 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 22/320 (6%) Query: 33 PVLSALIIGFTSWPIYSSFISK-KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+ + F + P++++ + + A + ++ +C + P+ +L + E Sbjct: 42 PLAWGAVAAFLTHPLFAALNRRTRGHCPGLCATLTLLAALCFVLAPVSYLVTFLGQETSA 101 Query: 92 LVSKVVLAN---QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL--KILSETFLKTNGI 146 LV+ + N Q G P W S +P + + L + L +++ + L G+ Sbjct: 102 LVAAIARFNAQIQGGTP-ELWFSKLPPRIQET---LGPLLQDRRLWGELVQKAGLWVGGL 157 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI--- 203 G Y S+ +++ FF RDG S+ L S P K+ Sbjct: 158 VAAGSSGLLQGTATFLYEASL--ALVSTFFLVRDGASMVAYLGS--ALPLPGEQKRAFLE 213 Query: 204 -SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 SR ++RS G+ + + ++ G +W+AG+P+ V G + + M+P G + Sbjct: 214 RSR---DLLRSVLFGVLLTVALQAVLGGLGWWVAGLPNPVFSGFLMFLFGMVPLVGTALI 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +YLLI G+I L LWGA+ + VD+ LRP + G P G++GG+ Sbjct: 271 WVPGGVYLLIAGHIKAGVLLLLWGALVVGSVDQFLRPLFISGRGGAPTFLVLLGILGGLS 330 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G LG+F+GP+ +AL V+ Sbjct: 331 AWGFLGIFLGPLALALFLVV 350 >gi|323138131|ref|ZP_08073204.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322396593|gb|EFX99121.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 351 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 16/279 (5%) Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +F A ++ + V + + PL F+ + E E + + Q + +W+ + W Sbjct: 70 SFGAALSVLIVALIIVGPLAFVSERLINEAVEGAAYI----QQEVTQGKWVDFLKAHPWL 125 Query: 120 SEL--WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + W + Q + FL G FI + + L+++ LFFF Sbjct: 126 ETVNNWIEGQFDLQDVLSRVGAFLTNAGALFIRQSTGQ--------ALTVLLSFYMLFFF 177 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RD + + L L K I RI I + G +A +G + G +W Sbjct: 178 LRDRKAGVEALLRLSPFSDIETRKLIVRI-RDTIYAIIYGTLAVAALQGALGGFIFWWLN 236 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 PS V +I ++A++P G + + +I+L I+G +A L LWG + + D + Sbjct: 237 FPSPVFWALIMGLLAIVPVLGTFVVWVPATIFLAIEGRWADALTLGLWGGVVIASSDNLV 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 RP L+ ++L P F ++GG++ G GL +GP+ M Sbjct: 297 RPLLISDTLRLHTAPAFIAMLGGIQLFGPSGLVLGPIAM 335 >gi|114570113|ref|YP_756793.1| hypothetical protein Mmar10_1563 [Maricaulis maris MCS10] gi|114340575|gb|ABI65855.1| protein of unknown function UPF0118 [Maricaulis maris MCS10] Length = 398 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 2/184 (1%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 FL L++ +I ALFFF G ++ +L A R + IR+T G Sbjct: 160 FLVATLNLFILIYALFFFLMTGRDAARSAVTLLPMTVEARELLAERAL-STIRATVKGSF 218 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 +IA+ +G + G ++AGVP + I A++++IP G P+ + +I+L G+ A Sbjct: 219 LIALVQGGLTGVGLFVAGVPGAIFWAAIAALLSIIPMIGPPLIWAPAAIWLAATGHPVAA 278 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L WGAI + D LRP LVG K+ L +GG+ G +G+ IGPV+ AL Sbjct: 279 GGLAAWGAIVVSTSDNILRPVLVGKDAKMSDLMVLISTLGGLTLFGAVGIIIGPVIAALF 338 Query: 339 AVIW 342 +W Sbjct: 339 TSVW 342 >gi|87312173|ref|ZP_01094276.1| probable permease [Blastopirellula marina DSM 3645] gi|87285098|gb|EAQ77029.1| probable permease [Blastopirellula marina DSM 3645] Length = 523 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 12/194 (6%) Query: 175 FFFYRDG---FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++F+ DG S + +L L + Y +++ +V R+ L + A+ +GL+ G Sbjct: 330 YYFFFDGPALISAAMRLSPLDDE----YERQLIEEFSQVSRAVVLATLLSALAQGLLAGI 385 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIEL 289 +W G+ S L +T +AM+P GA + VS++L++ A L ++G + Sbjct: 386 GFWFCGLESVFLLMFLTMTLAMVPFLGAASVWVPVSVWLIVAEERLAAGVGLAIYGVAVI 445 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI---WKESI 346 +VD ++PF++ G KL L ++GGV +G +G+ +GP+L+A + V+ + + Sbjct: 446 SLVDNIIKPFVLHGQSKLHPLLALLSVLGGVSALGPIGILVGPMLVAFMQVLLNMLRGEL 505 Query: 347 MAIKENKEKISSNF 360 + + E ++ +N Sbjct: 506 VKMGEAEDAKDANL 519 >gi|308271896|emb|CBX28504.1| hypothetical protein N47_G38280 [uncultured Desulfobacterium sp.] Length = 350 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 142/316 (44%), Gaps = 13/316 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ + ++ S A+I+TV V+ + +VP++ + E ++L + + I Sbjct: 45 PVHKYVLKVTKQRSGISALISTVFVITILLVPIILFGVQILNEAQQLYMSLAAGSTKKIV 104 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + I E + + LK + +LK + F + Sbjct: 105 HETIYNLI-------EKTGRFFPAVKELKFDIDLYLKEGLGLLLSHIGGVFSNVAKLMIN 157 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIG 224 S IF+ +L++ ++DG + + +L P + IS + I S G +IA+ Sbjct: 158 SFIFLT-SLYYLFKDGHKLKETFLNLSP--LPRNENELISNKLEGAINSVIKGNLVIALI 214 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 +G++ + + G+P+ + G +T + A+IPG G + I+L + G I L + Sbjct: 215 QGVLSAAGFAFFGIPNAMFWGSVTTVSALIPGVGTSLVLIPAIIFLFLTGKIAPGFGLLV 274 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 WGA + I+D L P LVG +++ + ++GG+ G +G +GP+ M+L + Sbjct: 275 WGAGAVGIIDNFLGPKLVGQRMQVHPMLILLSVLGGIVFFGPIGFLLGPLTMSLFFAFF- 333 Query: 344 ESIMAIKENKEKISSN 359 E AI+ ++ + + N Sbjct: 334 EIYSAIRLDQTENTDN 349 >gi|292488148|ref|YP_003531029.1| hypothetical protein EAMY_1671 [Erwinia amylovora CFBP1430] gi|292899359|ref|YP_003538728.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199207|emb|CBJ46322.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553576|emb|CBA20621.1| UPF0118 inner membrane protein ydiK [Erwinia amylovora CFBP1430] gi|312172286|emb|CBX80543.1| UPF0118 inner membrane protein ydiK [Erwinia amylovora ATCC BAA-2158] Length = 374 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 10/214 (4%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 +T G F A FG + L ++F ++ Y G + Q + L Sbjct: 148 RTTGFFFAQ--AGHFGRFMMHLGLMLLFSVL----LYWRGEQVGQGIRHFAFRLASRRGD 201 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + IR+ LG+ + A+ +G++ G ++G+P L V+ + ++ G I Sbjct: 202 AAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAISGIPFATILTVLMILSCLVQLGPLIV 261 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I+L G+ T L +W + + +D LRP L+ LP + G++GG+ Sbjct: 262 LVPAIIWLYWSGDTTWGTVLLIWSCV-VGTLDNVLRPMLIRMGADLPMILILSGVIGGLV 320 Query: 322 TMGLLGLFIGPVLMAL---IAVIWKESIMAIKEN 352 G++GLFIGPV++A+ + +W A EN Sbjct: 321 AFGMIGLFIGPVVLAISYRLVSVWVHETPAPHEN 354 >gi|289582606|ref|YP_003481072.1| hypothetical protein Nmag_2958 [Natrialba magadii ATCC 43099] gi|289532159|gb|ADD06510.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 339 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 7/154 (4%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 V+ + +G +IAI EG++ G A + G+P+ I I++++P GAP+ + SI Sbjct: 188 DVMWAVLVGHVLIAIIEGVIAGLALFAVGIPNAAFWTFIMVILSLVPLIGAPLVWIPASI 247 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL++ G A L ++ AI + + D LRP +V ++ G++GG+ G++G Sbjct: 248 YLVVIGEPLLAAGLAVYSAIVVGVSDDYLRPVVVDRYAEISPAVIILGVLGGIYAFGIMG 307 Query: 328 LFIGPVLM-ALIAVIWKESIMAIKENKEKISSNF 360 LF GPV++ ALI V I + E ++++ + Sbjct: 308 LFFGPVVVGALITV-----IEVLDEEYDRLAEEY 336 >gi|153003656|ref|YP_001377981.1| hypothetical protein Anae109_0785 [Anaeromyxobacter sp. Fw109-5] gi|152027229|gb|ABS24997.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 8/182 (4%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++ M+IALFF DG + LD L L + S+ V+ +T L I Sbjct: 160 QVVMMLIALFFMLVDGSRLVGWLDRHVPLRPGLLRELIEDFSKTSVSVLTAT-LATAGIQ 218 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 LV Y +A P+ V + T ++A++P G V + LL G++ T L Sbjct: 219 TATALV---GYLIARAPNLVFFTLATFVVALVPALGGAFMVVGVGLLLLATGHVLAGTFL 275 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 WGA + ++D RP+L+ G ++L FF L+GG+ T G +GL +GP+++ + + Sbjct: 276 VAWGAAVVSLIDNVARPYLLKGGMELHGGIVFFALIGGLATFGGIGLVLGPLIVTFLLAV 335 Query: 342 WK 343 K Sbjct: 336 LK 337 >gi|312131790|ref|YP_003999130.1| hypothetical protein Lbys_3116 [Leadbetterella byssophila DSM 17132] gi|311908336|gb|ADQ18777.1| protein of unknown function UPF0118 [Leadbetterella byssophila DSM 17132] Length = 343 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 42/342 (12%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y+L GF A + L I + W Y +K + A++ + ++PL L Y Sbjct: 33 YYLPGFLAAI--TLYIVYREW--YFRLTEQKRWNKVLTALLFIFFSIVFIVLPLWGLIDY 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + + Q V ++S P L LS ++L ++ K Sbjct: 89 MIPRLSVFLDNTDSIMQKFNQVKEYMSKKP------VLENIDLSD-EALADFLQSLTK-- 139 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 ++PR + + L+ M++A F Y S ++L++ H FP + ++S Sbjct: 140 ---YLPRILNSVAEVLLN-------MLVAFFVLYFMLVS-GRKLENQLTHFFP--YSEVS 186 Query: 205 RI-----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 R + ++R+ +G+ I+ + +GLV Y+L GV + V G++T + + P G Sbjct: 187 RQELWSEIKLMVRTNAIGIPILGMCQGLVAMLGYYLFGVENAVLWGIVTGVATVFPVLGT 246 Query: 259 PISFTAVSIYLLIKGNIFNAT-----CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + + I G NA C FL G I D LR L+ + L T Sbjct: 247 MAVYVPICIVSFATGEWTNALWLTLYCFFLVGGI-----DNVLRFTLLKTLGNVHPLITV 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 FG++ G++ G+LGL GP+L++ +AV++K + KEK Sbjct: 302 FGVLLGLKLFGMLGLIFGPLLLSSVAVLFKVYLNEYGRPKEK 343 >gi|261350100|ref|ZP_05975517.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|288860886|gb|EFC93184.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length = 348 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 39/341 (11%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKE--ESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +PVL+ +I+G + P+ SK + S FLAVI L ++PL+ L Y Sbjct: 28 SPVLNMVILGAILAYAIRPLARKITSKIKIRSVSIFLAVI-------LVMIPLVILIAYI 80 Query: 86 MLEMKELVSKVVLANQHGIP------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++S V++ N G + + ++ +P + +S + T + S Sbjct: 81 ISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADI-SSGIDTASIKSSLS------G 133 Query: 140 FLKTNG---IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F+K G +D+I AS+ I +D L I+F ++++F RDG + ++S Sbjct: 134 FIKDIGNVVLDYIVSLASKLLSISVD--LFILFA--SIYYFIRDGDNCYDFVESFIPQES 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++++ V +V++S F G + ++ G++ Y L G V LGV+T I +IP Sbjct: 190 KDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIAAVGYSLLGYSQGVFLGVLTGIFQLIPI 249 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G PI +T ++I LI GN + L+G L + D +RP L + L Sbjct: 250 FGPWPIYWT-LAIVDLISGNYVRVVIVILFGFF-LSLSDMYIRPALSSHYADIHPLILLI 307 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + G G++G +GP+++ + + I+ NK K Sbjct: 308 GFLAGPLVYGIVGFILGPLILGITYAVLDN--FRIELNKSK 346 >gi|332112088|gb|EGJ12064.1| hypothetical protein RBXJA2T_17117 [Rubrivivax benzoatilyticus JA2] Length = 359 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 24/326 (7%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL+ LK F P + A ++ +WP+ + S + T+ ++ LF VPL L Sbjct: 23 SLWILKPFVGPTIWATMVVVATWPLMLRVQAALGGSRAAAVTVMTLLLVLLFAVPLA-LS 81 Query: 83 YYGMLEMKELVSKVV--LAN-QHGIPVPRWLSDIPGGMWASEL---WTKHLSHP-QSLKI 135 ++E + +++ LA + P WL +P M +L W + ++ + L + Sbjct: 82 IATLVENADRIAQTARDLATWRPSREAPAWLLALP--MVGPKLAVAWEQAVAAGLEGLVV 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + F+ FG + L + L+++ + Y G Q+ + L Sbjct: 140 RIQPYAGGFTRWFVGEIGD-FGSVALQFVLTVVIAAV----MYAQGEVFGAQVRAFAGRL 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + IR LG+ + A+ + ++ G LAGVP G++TA+M M+ Sbjct: 195 AGERGVGAVTLAADAIRGVALGVGVTAVVQAVLGGVGLALAGVPLA---GLLTALMFMLC 251 Query: 256 ----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 G P+ A ++L G++ L +W AI + +D LRP L+ LP L Sbjct: 252 IAQIGALPVLLPAAG-WVLYGGDVGWGVFLLVWSAI-VGTLDNFLRPVLIRLGADLPLLL 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMAL 337 F G++GG+ GL+G+F+GPV++A+ Sbjct: 310 IFAGVIGGLLAFGLVGIFVGPVVLAV 335 >gi|253989383|ref|YP_003040739.1| inner membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780833|emb|CAQ83995.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 369 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/345 (20%), Positives = 144/345 (41%), Gaps = 10/345 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I+ S + +K F + A ++ +WP+ + I T+ ++ LF++P Sbjct: 22 LLIVTSFWVMKPFILGFVWAGMVVIATWPLLEKLQNSLWGKRWLAVAIMTLLLILLFVIP 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSLKI 135 ++ L + L++ +P WLS IP G S W ++ ++ I Sbjct: 82 IVLLVSSLLENSAPLIAWAKSPTNFQMPAMTWLSSIPLVGDKLYSG-WNSLITDGGNVLI 140 Query: 136 LS-ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ++ F + A+ G L ++F ++ Y G ++ + Sbjct: 141 AKVQPYIGEAATWFFTQ-AANAGRFVFHLALMVLFSVL----LYLKGEQVTMSIRHFAVR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++G+P L V+ + + Sbjct: 196 LADKRGDAAILLAAQSIRAVALGVVVTALVQAIIGGIGLAVSGIPYATLLTVLMFVCCVA 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + +L G+ T L +W + + +D LRPFL+ LP Sbjct: 256 QIGPLLILVPAVAWLYWTGDTTWGTALLVWSCV-VTTMDGFLRPFLIRLGADLPMALILT 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ + G++GLFIGPV++A+ + + I E K ++ Sbjct: 315 GVIGGILSFGMIGLFIGPVVLAVAYRLLIAWMNEIPEPKNDLTET 359 >gi|317047270|ref|YP_004114918.1| hypothetical protein Pat9b_1040 [Pantoea sp. At-9b] gi|316948887|gb|ADU68362.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 367 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/355 (21%), Positives = 163/355 (45%), Gaps = 28/355 (7%) Query: 15 MIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ I+ V+ + L +F+ + A I+ P+ S + +K LA + T+ ++CL Sbjct: 13 VILAIVTVAFFDVLTPYFSAIFWAAILAVIFHPL-KSLLRQKMGDRNGLASLVTLLIICL 71 Query: 74 FI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASE-LWTKHLSH 129 + PL + ++E+ + +K+ + P +D+ + WA L HL++ Sbjct: 72 IVFTPLAIVTSSLVVELNTVYNKL---QNNSSQFPTVFADLFQHLPDWARNYLSEHHLNN 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQL 188 ++ +F G ++ G + + M+ LFF +DG + ++ L Sbjct: 129 AAQIQEKLSSFALKGG-QYMAGSVFVIGKGTFTFTVGFGVMLYLLFFLLKDGAWLVNLIL 187 Query: 189 DSL------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L HL + V R+T G ++A+ +G++ G A+W+ + + Sbjct: 188 EALPLSTHVKHHLLLKF--------AAVSRATVKGTVVVAVVQGILGGLAFWITDIDGSL 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A +++IP G+ I + +I+ G ++ L + + + +VD LRP LV Sbjct: 240 LWGALMAFLSLIPAIGSAIIWVPAAIFFFATGALWKGLFLVGFFVVVVGLVDNILRPLLV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G K+P +GG+ G+ G IGP++ AL W ++++ ++N++ + Sbjct: 300 GKDTKMPDYLILIATLGGMEVYGINGFVIGPLIAALFIACW--NLLSGRDNRDNV 352 >gi|222445339|ref|ZP_03607854.1| hypothetical protein METSMIALI_00967 [Methanobrevibacter smithii DSM 2375] gi|222434904|gb|EEE42069.1| hypothetical protein METSMIALI_00967 [Methanobrevibacter smithii DSM 2375] Length = 348 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 39/341 (11%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKE--ESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +PVL+ +I+G + P+ SK + S FLAVI L ++PL+ L Y Sbjct: 28 SPVLNMVILGAILAYAIRPLARKITSKIKIRSVSIFLAVI-------LVMIPLVILIAYI 80 Query: 86 MLEMKELVSKVVLANQHGIP------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++S V++ N G + + ++ +P + +S + T + S Sbjct: 81 ISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADI-SSGIDTASIKSSLS------G 133 Query: 140 FLKTNG---IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F+K G +D+I AS+ I +D L I+F ++++F RDG + ++S Sbjct: 134 FIKDIGNVVLDYIVSLASKLLSISVD--LFILFA--SIYYFIRDGDNCYDFVESFIPQES 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++++ V +V++S F G + ++ G++ Y L G V LGV+T I +IP Sbjct: 190 KDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIAAVGYSLLGYSQGVFLGVLTGIFQLIPI 249 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G PI +T ++I LI GN + L+G L + D +RP L + L Sbjct: 250 FGPWPIYWT-LAIIDLISGNYVRVVIVILFGFF-LSLSDMYIRPALSSHYADIHPLILLI 307 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + G G++G +GP+++ + + I+ NK K Sbjct: 308 GFLAGPLVYGIVGFILGPLILGITYAVLDN--FRIELNKSK 346 >gi|238757756|ref|ZP_04618939.1| hypothetical protein yaldo0001_35130 [Yersinia aldovae ATCC 35236] gi|238703999|gb|EEP96533.1| hypothetical protein yaldo0001_35130 [Yersinia aldovae ATCC 35236] Length = 367 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 16/349 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IM +I+ S + ++ F A ++ +WP+ F A++ T+ ++ LF+ Sbjct: 21 IMIMIVSSFWVVQPFIMGFAWAGMVVIATWPLLIRFEKLLWGKRWLAAIVMTMLLILLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSL 133 +P+ L + +++ ++ P WL IP G S T +L Sbjct: 81 IPIALLVSSLVENSGPVIAWASSPSKLHFPEMNWLQSIPMIGSKLYSSWHTLVAGGGNAL 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQLD 189 + ++ + + A+ G + L ++F + F + G I + D Sbjct: 141 LAKVQPYVGATATWLVAQ-AAHVGYFVIHLALMVLFSTLLYFHGEQVGLGIRHFAVRAAD 199 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 G+ + + K IR+ LG+ + A+ + ++ G +AG+ L V+ Sbjct: 200 KRGD--------AVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLLTVLMF 251 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I + G + I+L G+ T L +W I + +D LRP+L+ +P Sbjct: 252 ICCVAQLGPLLILVPAVIWLYWTGDTTWGTVLLVWSCI-VGTMDNVLRPYLIRMEADMPM 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 311 ILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESIKD 359 >gi|149190146|ref|ZP_01868422.1| predicted permease [Vibrio shilonii AK1] gi|148836035|gb|EDL52996.1| predicted permease [Vibrio shilonii AK1] Length = 357 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 5/155 (3%) Query: 193 EHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 H+ P + R+ + KV +S +G + AI +G G W+AG P + G + Sbjct: 188 RHILPFSRSQEDRLLNEIEKVSKSAVMGSFLTAIAQGAAGGFGMWMAGFPG-LFWGTMMG 246 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP G + + + YLLI G+ L +W + +D LRP L+ G + Sbjct: 247 FASFIPVVGTALIWIPATAYLLITGDTTWGLFLAVWSIAVVGSIDNVLRPLLMQGSAGMN 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 307 TLMIFFSLLGGIHLFGLIGLIYGPLIFAITMVLFN 341 >gi|332161640|ref|YP_004298217.1| putative inner membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605868|emb|CBY27366.1| putative membrane protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665870|gb|ADZ42514.1| putative inner membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861398|emb|CBX71629.1| UPF0118 inner membrane protein ydiK [Yersinia enterocolitica W22703] Length = 367 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/350 (21%), Positives = 147/350 (42%), Gaps = 18/350 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IM +I+ S + ++ F A ++ +WP+ A+I T+ ++ LF+ Sbjct: 21 IMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKILWGKRWLAAIIMTILLVLLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQS 132 +P+ L + L+ + +P WL IP M ++L W ++ + Sbjct: 81 IPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSIP--MVGNKLYSGWHSLIAGGGN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQL 188 + I ++ A+ G + L ++F I+ F + G I + Sbjct: 139 VLIAKIQPYVGAAATWLVAQAAHIGYFLIHLALMVLFSILLYFHGEQVGLGIRHFAVRAA 198 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D G+ + + K IR+ LG+ + A+ + ++ G +AG+ V+ Sbjct: 199 DKRGD--------AVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLM 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I + G + I+L G+ T L +W I + +D LRP+L+ +P Sbjct: 251 FICCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCI-VGTMDNVLRPYLIRMEADMP 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 310 MILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESITE 359 >gi|148643102|ref|YP_001273615.1| permease [Methanobrevibacter smithii ATCC 35061] gi|148552119|gb|ABQ87247.1| predicted permease [Methanobrevibacter smithii ATCC 35061] Length = 348 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 39/341 (11%) Query: 32 APVLSALIIG----FTSWPIYSSFISKKE--ESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +PVL+ +I+G + P+ SK + S FLAVI L ++PL+ L Y Sbjct: 28 SPVLNMVILGAILAYAIRPLARKITSKIKIRSVSIFLAVI-------LVMIPLVILIAYI 80 Query: 86 MLEMKELVSKVVLANQHGIP------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++S V++ N G + + ++ +P + +S + T + S Sbjct: 81 ISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADI-SSGIDTASIKSSLS------G 133 Query: 140 FLKTNG---IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F+K G +D+I AS+ I +D L I+F ++++F RDG + ++S Sbjct: 134 FIKDIGNVVLDYIVSLASKLLSISVD--LFILFA--SIYYFIRDGDNCYDFVESFIPQES 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++++ V +V++S F G + ++ G++ Y L G V LGV+T I +IP Sbjct: 190 KDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVLTGIFQLIPI 249 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G PI +T ++I LI GN + L+G L + D +RP L + L Sbjct: 250 FGPWPIYWT-LAIVDLISGNYVRVVIVILFGFF-LSLSDMYIRPALSSHYADIHPLILLI 307 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + G G++G +GP+++ + + I+ NK K Sbjct: 308 GFLAGPLVYGIVGFILGPLILGITYAVLDN--FRIELNKSK 346 >gi|291617264|ref|YP_003520006.1| YdiK [Pantoea ananatis LMG 20103] gi|291152294|gb|ADD76878.1| YdiK [Pantoea ananatis LMG 20103] Length = 376 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/331 (19%), Positives = 140/331 (42%), Gaps = 19/331 (5%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A ++ +WP+ + ++ T+ ++ LFI+P+ L + +++ Sbjct: 51 ASMVVIATWPLMLKIQRLLWGRRSLAVIVMTILLLLLFIIPVALLVNSLIDNSAPVIAWA 110 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLS-----HPQSLKILSETFLKTNGIDFIPR 151 H +P WL+DIP M +L+ + + L +T G F+ R Sbjct: 111 --TQGHMLPTLNWLNDIP--MVGEKLYASYQKLVAGGGAAIMAKLQPYVGRTTG--FLWR 164 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + + + ++F ++ Y G +Q + + + + + Sbjct: 165 RPGTLAVFMIHLAVMLLFSVL----LYWRGEQAAQGIRHFAWRMAGRRGDAAVLLAGQAV 220 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ +G++ G ++G+P L V+ + ++ G + +YL Sbjct: 221 RAVALGVVVTALVQGVLGGIGLAVSGIPYATLLTVLMILCCLVQIGPLLVLVPAIVYLYW 280 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D LRP L+ LP + G++GG+ G++GLFIG Sbjct: 281 SGDTTWGTVLLIWSCV-VGTLDNILRPVLIRMGADLPLILILSGVIGGLIAFGMIGLFIG 339 Query: 332 PVLMAL---IAVIWKESIMAIKENKEKISSN 359 PV++A+ + +W + A + + + S Sbjct: 340 PVVLAVSYRLVSVWMHEVPAPQADPLSVVSE 370 >gi|21958751|gb|AAM85497.1|AE013795_7 hypothetical protein y1931 [Yersinia pestis KIM 10] gi|45436849|gb|AAS62402.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] Length = 382 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/347 (19%), Positives = 148/347 (42%), Gaps = 12/347 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ LF+ Sbjct: 36 IMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILLFV 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP---GGMWASELWTKHLSH-PQ 131 +P+ L + L+ + +P W+ IP +++S W +S Sbjct: 96 IPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSS--WNTLISGGAN 153 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + ++ F+ + A+ G + L ++F ++ Y G ++ + Sbjct: 154 ALMAKVQPYIGATATWFVAQ-AAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHF 208 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 209 AMRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFIC 268 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 269 CVAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMIL 327 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 328 ILSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 374 >gi|269103476|ref|ZP_06156173.1| predicted permease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163374|gb|EEZ41870.1| predicted permease [Photobacterium damselae subsp. damselae CIP 102761] Length = 362 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 91/363 (25%), Positives = 161/363 (44%), Gaps = 59/363 (16%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 WM++ ++++ Y ++ + P++ A+II P++ K S ++++ Sbjct: 11 HWMLVVALVIAGYASYRIIEPYLGPIIMAVIISLLCHPMHEKIRGKMPGSPNIASLLSCT 70 Query: 69 SVMCLFIVPLLFLF----YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++P+L +F + G KE + WL+D GG A EL+ Sbjct: 71 LLTFIIMIPMLVVFSSIVHQGTTFSKESYT--------------WLTD--GG--AKELF- 111 Query: 125 KHLSHPQSLK--ILSETFLKTNGID------FIPRFASRFGMIFLD-----------YCL 165 +HP K L + + ID I AS+ G L+ + + Sbjct: 112 ---AHPYVQKSFALIDKYSPFKSIDPQEVLQKIASIASQLGSTLLNVSTKLLGDVTNFLM 168 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIA 222 S I M+ LFF RD ++ + ++ P + + V V +S LG + A Sbjct: 169 SFILMLFVLFFLLRD----HDKMVATVRNVLPLSRSQEDALFSEVQTVAKSAVLGSFMTA 224 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 + +G+ G A WL G P + G + A + IP G + + ++YLL+ G A L Sbjct: 225 LAQGVAGGFAMWLCGFPG-LFWGSMMAFASFIPVVGTALIWVPATLYLLLLGQWEWALFL 283 Query: 282 FLWGAIELFIVDKTLRPFLV-GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 WG I + +D LRP L+ GG + L FF ++GG++ GL+GL GP++ + V Sbjct: 284 TGWGIIVVGSIDNVLRPLLMQGGDSNMNTLLIFFSILGGLQLFGLIGLIYGPIIFGVTLV 343 Query: 341 IWK 343 ++K Sbjct: 344 LFK 346 >gi|163782562|ref|ZP_02177559.1| hypothetical protein HG1285_16800 [Hydrogenivirga sp. 128-5-R1-1] gi|159882135|gb|EDP75642.1| hypothetical protein HG1285_16800 [Hydrogenivirga sp. 128-5-R1-1] Length = 355 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 159/341 (46%), Gaps = 22/341 (6%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++F I ++ L F P+L A++IG +P++ +I K + T A++ ++ V Sbjct: 14 LVLFFIFAAVLMLLPFAVPILWAVVIGIVLYPLHR-YIEKVVRNRTLSALLMSLIVFLFI 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 IVPL + + ++ + +V++ Q H + L + G + + + S P Sbjct: 73 IVPLSVVSVLVLQQLVDATQRVMMYLQSHSY---QELLETLGKSPVVKDYFERFS-PVME 128 Query: 134 KILSETF--LKTNGIDFIPRF-ASRFGMIFL---DYCLSIIFMIIALFFFYRDGFSISQQ 187 + E F L + ++ + +F + G + I ++ FF RDG I ++ Sbjct: 129 FVQKEEFRQLIADSLNRVLKFLGDKLGQLAFIAGRNLFYIFVFLLTFFFILRDGPGILRR 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG----SAYWLAGVPSHVA 243 + E L P + + ++ + R T L + ++G L+ AY + G+ + Sbjct: 189 V----ERLIPMNDEDLESVMATMYR-TILAVVYGSVGTALLQSIFAFFAYSVVGIRFALL 243 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+T A IP GA + +++Y I+ + A L WG + + +D +RP ++ Sbjct: 244 WSVLTFFAAFIPPFGASAVWFPLAVYSFIEFGTWQAAFLGAWGVLVISSMDNFVRPLIIK 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +++P++ FF +GG+ G +GLF+GP++ + ++K Sbjct: 304 QGVQIPYVVLFFATIGGLLKFGFIGLFLGPIIFTTLFALFK 344 >gi|322372142|ref|ZP_08046683.1| hypothetical protein ZOD2009_21617 [Haladaptatus paucihalophilus DX253] gi|320548151|gb|EFW89824.1| hypothetical protein ZOD2009_21617 [Haladaptatus paucihalophilus DX253] Length = 331 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 79/341 (23%), Positives = 160/341 (46%), Gaps = 32/341 (9%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + ++I +++ +K F VL+A+++G+ P+ + F S+ + L++ Sbjct: 1 MNRQRGFLLFLIAVFGVLATLLVKPFLQYVLAAILLGYILHPVQTRFESRVSARVSALSL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ +++ IVP+ + + LV +V + PR+ I E +T Sbjct: 61 ISLTTLVV--IVPVGAIAVIAAQQAFTLVRAIVQGD------PRFAELIA----LVERYT 108 Query: 125 KHLSHPQSLKIL----SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 H ++L+ L S + L N + FG + D + + M+ L++ D Sbjct: 109 GVTIHGRTLQELLPAGSSSRLIENALGI-------FGGLS-DALIGLTVMVFILYYLLTD 160 Query: 181 GFSIS---QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G ++ L + + + ++ R++ V+ +G ++ I +G++ G + +AG Sbjct: 161 GEEFVAWIRRCTPLPDDVQDELYSEMDRVMWGVL----VGNLLVGIVQGILTGIGFVIAG 216 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP V V+T +++++P GA + + S+YL + A LF++G + + + D L Sbjct: 217 VPGVVFWTVVTTVLSLLPLIGASVVWLPASLYLFLVDRPIAAAFLFVYGTLVVSLSDNYL 276 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 RP + G KL G+ GGV G +GLF GP+++ + Sbjct: 277 RPLVSGHEAKLNPGILVVGIFGGVYVFGFMGLFFGPIVLGI 317 >gi|292491658|ref|YP_003527097.1| hypothetical protein Nhal_1573 [Nitrosococcus halophilus Nc4] gi|291580253|gb|ADE14710.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 358 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 36/300 (12%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y + A + +AL+ +P+Y+ + +VI V V+ +F++ L L Sbjct: 34 YLIALLLAIIFTALL-----YPVYNQVLRILHGRRALSSVI--VLVLAIFVIGLPLLGLL 86 Query: 85 GMLEMKEL-VSKVV-------LANQHGI--PVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 G + + + +S+ V L +QH + +P W +++ L +S Sbjct: 87 GAVAAEAVQISESVEPWLEKKLPDQHDLSRDIPEWFP-----------FSEQLEPYKSRI 135 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR---DGFSISQQLDSL 191 I L N +F+ + S +++ + M+ A+FFF D ++ + L Sbjct: 136 IAKGGELAGNAGEFLAKSISAVTQGTINFIVKFFIMLYAMFFFLMWGPDSLTVLMRYIPL 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 E +K I +++S +I + +G+++G A+W+AG+ + G I ++ Sbjct: 196 TEKDRSLLLEKGLAITKAILKSIL----VIGVLQGILVGLAFWVAGLKGAIFWGAIVVVL 251 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IPG GAP+ + IYL + G A + LWG+I + VD LRP +VG K+P L Sbjct: 252 SAIPGLGAPLIWIPAVIYLALSGQTGWAIGMTLWGSIIVGSVDNILRPHIVGSEAKMPDL 311 >gi|51596641|ref|YP_070832.1| inner membrane protein [Yersinia pseudotuberculosis IP 32953] gi|149365682|ref|ZP_01887717.1| putative membrane protein [Yersinia pestis CA88-4125] gi|153950534|ref|YP_001400713.1| inner membrane protein [Yersinia pseudotuberculosis IP 31758] gi|161484817|ref|NP_669246.2| putative inner membrane protein [Yersinia pestis KIM 10] gi|161511367|ref|NP_993525.2| putative inner membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|162100171|ref|YP_651663.2| putative inner membrane protein [Yersinia pestis Antiqua] gi|162139438|ref|YP_647791.2| putative inner membrane protein [Yersinia pestis Nepal516] gi|165927526|ref|ZP_02223358.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939531|ref|ZP_02228077.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011791|ref|ZP_02232689.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210661|ref|ZP_02236696.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400956|ref|ZP_02306462.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422187|ref|ZP_02313940.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424857|ref|ZP_02316610.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469404|ref|ZP_02334108.1| putative inner membrane protein [Yersinia pestis FV-1] gi|170024083|ref|YP_001720588.1| hypothetical protein YPK_1844 [Yersinia pseudotuberculosis YPIII] gi|186895697|ref|YP_001872809.1| hypothetical protein YPTS_2391 [Yersinia pseudotuberculosis PB1/+] gi|218929498|ref|YP_002347373.1| putative inner membrane protein [Yersinia pestis CO92] gi|229837932|ref|ZP_04458091.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895092|ref|ZP_04510268.1| predicted inner membrane protein [Yersinia pestis Pestoides A] gi|229898493|ref|ZP_04513638.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902336|ref|ZP_04517456.1| predicted inner membrane protein [Yersinia pestis Nepal516] gi|270490484|ref|ZP_06207558.1| putative membrane protein [Yersinia pestis KIM D27] gi|294503589|ref|YP_003567651.1| hypothetical protein YPZ3_1479 [Yersinia pestis Z176003] gi|51589923|emb|CAH21555.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953] gi|115348109|emb|CAL21036.1| putative membrane protein [Yersinia pestis CO92] gi|149292095|gb|EDM42169.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152962029|gb|ABS49490.1| putative membrane protein [Yersinia pseudotuberculosis IP 31758] gi|165912580|gb|EDR31211.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920581|gb|EDR37858.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989256|gb|EDR41557.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207841|gb|EDR52321.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958999|gb|EDR56020.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049809|gb|EDR61217.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056044|gb|EDR65822.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750617|gb|ACA68135.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis YPIII] gi|186698723|gb|ACC89352.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis PB1/+] gi|229680671|gb|EEO76767.1| predicted inner membrane protein [Yersinia pestis Nepal516] gi|229688041|gb|EEO80112.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694298|gb|EEO84345.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701854|gb|EEO89877.1| predicted inner membrane protein [Yersinia pestis Pestoides A] gi|262361631|gb|ACY58352.1| hypothetical protein YPD4_1444 [Yersinia pestis D106004] gi|262365627|gb|ACY62184.1| hypothetical protein YPD8_1501 [Yersinia pestis D182038] gi|270338988|gb|EFA49765.1| putative membrane protein [Yersinia pestis KIM D27] gi|294354048|gb|ADE64389.1| hypothetical protein YPZ3_1479 [Yersinia pestis Z176003] gi|320015062|gb|ADV98633.1| putative inner membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 367 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/347 (19%), Positives = 148/347 (42%), Gaps = 12/347 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ LF+ Sbjct: 21 IMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP---GGMWASELWTKHLSH-PQ 131 +P+ L + L+ + +P W+ IP +++S W +S Sbjct: 81 IPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSS--WNTLISGGAN 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + ++ F+ + A+ G + L ++F ++ Y G ++ + Sbjct: 139 ALMAKVQPYIGATATWFVAQ-AAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHF 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 194 AMRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFIC 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 254 CVAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMIL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 313 ILSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 359 >gi|255536614|ref|YP_003096985.1| hypothetical protein FIC_02490 [Flavobacteriaceae bacterium 3519-10] gi|255342810|gb|ACU08923.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 367 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 1/132 (0%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + K++ + +G+ ++AIG+G+V Y++ PS + L +TA+ +MIP GA I + V Sbjct: 201 IRKMVIANAIGIPVVAIGQGIVAVIGYFIFDAPSAILLFALTAVASMIPIVGAAIVYVPV 260 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I+++ +GN L + + + + D LR L+ + L T FG++ G++ G Sbjct: 261 CIFMIAEGNTGQGLGLAAYCMVAVGLTDNLLRFTLLKRLENIHPLNTVFGIIVGMKIFGF 320 Query: 326 LGLFIGPVLMAL 337 +GL GP+L+++ Sbjct: 321 MGLIFGPILVSI 332 >gi|269102539|ref|ZP_06155236.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162437|gb|EEZ40933.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 371 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 86/358 (24%), Positives = 153/358 (42%), Gaps = 36/358 (10%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ +I+ + +K F PVL II P+ + + A + + + L Sbjct: 22 LLLVLIIWTYDIVKPFIIPVLWGAIIAVALMPLTDKLQAVFKGRRGLAATVIALVCIALL 81 Query: 75 IVPLLFL---FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASELWTKHLSH 129 I P + + Y G+ V+ + IP P + ++DIP G E+W+ Sbjct: 82 IAPFVMVSGSIYDGITHTMS----VLQSGDIKIPGPTQRIADIPVVGDKIYEVWS----- 132 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFF---FYRDGFS 183 L T ++ +F+P + G I S++ IIAL F Sbjct: 133 ------LFATNMEKAVTNFLPEIKTAVGTLASILGSSLASLVVFIIALAVAGGFMTHSHK 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH-- 241 I++ + + K + + IRS LG+ +A + +++GSA + VP Sbjct: 187 ITEAIQKVSIRTVGKNGAKWTTLTAATIRSVLLGVVGVAFIQAMIIGSAMFAFHVPMAGL 246 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LGV+ +A +P A I V Y+ G+ + T +W A+ + D L+P L+ Sbjct: 247 LTLGVLILCIAQLP--ALIVIAPVIFYVYSTGDGTSTTIFTIW-ALAGGLADNILKPMLM 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA-IKENKEKISS 358 G + +P G +GG+ G++GLF+G V++A IW E MA +K + E + Sbjct: 304 GRGVDVPMPVILIGAIGGMLFSGIIGLFLGAVILA----IWYELFMAWLKADAETTQA 357 >gi|329296193|ref|ZP_08253529.1| putative inner membrane protein [Plautia stali symbiont] Length = 370 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 19/267 (7%) Query: 99 ANQHGIPVPR--WLSDIPGGMWASELWTKH--LSHPQSLKILSET---FLKTNGIDFIPR 151 A Q + +P WL DIP +L++ + L I+S+ +T G F Sbjct: 100 ATQRHLVLPDLAWLRDIPYA--GRKLYSSYHKLIDGGGAAIMSQVQPYIGRTTG--FFVA 155 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A FG L L ++F ++ + + G I +G A + + I Sbjct: 156 QAGHFGRFMLHLALMLLFSVLLYWRGEQVGLGIRHFAYRMGGRRGDAA----VLLAGQAI 211 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ +G++ G ++G+P L V+ + ++ G I I+L Sbjct: 212 RAVALGVVVTALVQGVLGGIGLAISGIPYATLLTVLMILTCLVQLGPLIVLVPAIIWLYW 271 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D LRP L+ LP + G++GG+ G++GLFIG Sbjct: 272 SGDTTWGTVLLVWSCV-VGTLDNVLRPMLIRMGADLPMILILSGVIGGLIAFGMIGLFIG 330 Query: 332 PVLMAL---IAVIWKESIMAIKENKEK 355 PV++A+ + +W A ++ E Sbjct: 331 PVVLAVSYRLVSVWMHEAPAPDDDPET 357 >gi|21672406|ref|NP_660473.1| putative inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091630|sp|Q8KA12|Y115_BUCAP RecName: Full=UPF0118 membrane protein BUsg_115 gi|21623015|gb|AAM67684.1| hypothetical 39.8 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 364 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y +G IS + L + I + + +R+ LG+ + A+ + ++ G ++G Sbjct: 178 YWNGEKISNSIRQFASRLSSRNGEAIVLLSVQAVRAVALGVVVTALIQAVLSGIGLLISG 237 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP L ++ +I G PI +V I+L N T L +W +FI+D L Sbjct: 238 VPYWTLLMILIVFSCLIQLGPLPILIPSV-IWLYWNSNTTWGTLLLIWSCF-VFILDNIL 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA-----LIAVIWKESIMAIKE 351 RPF + LP G++GG+ G++GLFIGPV++ +++ I+ SI + E Sbjct: 296 RPFFIRIGSDLPTFLILLGVIGGLLAFGMIGLFIGPVVLVILYRLIVSWIYGISIASFLE 355 Query: 352 NKE-KISSN 359 N K SN Sbjct: 356 NTTLKSKSN 364 >gi|205352916|ref|YP_002226717.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272697|emb|CAR37611.1| lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627989|gb|EGE34332.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 372 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 6/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W A+ + +D +RP L+ LP LP G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLPILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVI---WKESIMAIKENKEKI 356 LFIGPVL+A+ + W + A E+I Sbjct: 327 LFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|304315341|ref|YP_003850488.1| hypothetical protein MTBMA_c15960 [Methanothermobacter marburgensis str. Marburg] gi|302588800|gb|ADL59175.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 335 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 9/196 (4%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L + + + F+F RDG + + + + ++++ +V+ S F G + A+ Sbjct: 143 ALQLFIFLSSTFYFARDGERLLSYIRGIIPTEAKPFMRRMASETERVLMSIFYGHFLTAL 202 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLF 282 G++ G + L G P + LG+IT I +IP P ++T ++IY L+ GNI + Sbjct: 203 LIGIMAGLGFHLLGYPYAIVLGIITGIFQLIPVIGPWAAYTPLAIYDLVTGNILRGVLVL 262 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM-----AL 337 ++G I L +D LRP L G + + G +GG G+ G +GP+++ AL Sbjct: 263 IFG-IFLSTIDIYLRPKLSGKYADIHPMIFLVGFLGGPVVWGVAGFIVGPLVLGLAYAAL 321 Query: 338 IAVIWKESIMAIKENK 353 A ES A +EN+ Sbjct: 322 EAYRLGES--AAEENQ 335 >gi|146311402|ref|YP_001176476.1| putative inner membrane protein [Enterobacter sp. 638] gi|145318278|gb|ABP60425.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 371 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 14/328 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 II+ L+ ++ F A + +WP++ + V+ T+ + +FI+P+ Sbjct: 23 IIIACLWIVRPFVLGFAWAGTVVIATWPLFIRLQKLLFGRRSLAVVVMTLFLFLVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILS 137 L +++ V + V + + IP WL+ +P G W L S I++ Sbjct: 83 ALLVN-SLVDTSGPVIRSVTSGEMTIPDLAWLNSVPVIGAKLYSGWHSLLEMGGS-AIMT 140 Query: 138 ET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ T F+ + A+ G + L ++F + Y G ++ + L Sbjct: 141 KVRPYIGTTTTWFVGQ-AAHVGRFVMHCALMLVFSAL----LYWRGEQVALGVRHFATRL 195 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + +R+ LG+ + A+ + ++ G ++GVP VI + ++ Sbjct: 196 AGQRGDAAVLLAGQAVRAVALGVVVTALVQAVLGGIGLAISGVPYATIFTVIMILTCLVQ 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + I+L G+ T L +W + + +D +RP L+ LP + G Sbjct: 256 LGPLLVLIPCIIWLYWSGDTTWGTVLLVWSCV-VGTMDNVIRPMLIRMGADLPLILILSG 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++GG+ G++GLFIGPVL+ AV W+ Sbjct: 315 VIGGLIAFGMIGLFIGPVLL---AVTWR 339 >gi|260771194|ref|ZP_05880121.1| predicted permease [Vibrio furnissii CIP 102972] gi|260613791|gb|EEX38983.1| predicted permease [Vibrio furnissii CIP 102972] gi|315179200|gb|ADT86114.1| Predicted permease [Vibrio furnissii NCTC 11218] Length = 361 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 77/343 (22%), Positives = 150/343 (43%), Gaps = 20/343 (5%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ +L + + +K + ++ A II +PI+ +K ++++ + Sbjct: 11 HWVLIVALLAAAFTCYLLVKPYVNSIVMAFIISLLMFPIHEKLEAKLPSHKNLASLLSCI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG----IPVPRWLSDIPGGMWASELWT 124 + + ++PLLF+F + + + V HG + W+ + G A+ Sbjct: 71 ILTFIIVIPLLFVFGAIVQQGSKFSQNVYQWVTHGGIQTVFNHPWV--VKGLSLANHYLP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 PQ + + G + + A G ++ ++ + M+ LFF RD I Sbjct: 129 FDEIQPQQIAQKVGQLATSFGSNLVGISAKILGDA-TNFIMNFLLMLFVLFFLLRDHDKI 187 Query: 185 SQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + H+ P + K+ + +V +S +G + AI +G G W+AG P Sbjct: 188 ITAI----RHILPLSRSQEDKLLSEIEQVSKSAVMGSFLTAIAQGAAGGFGMWMAGFPG- 242 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + + IP G + + +IYL + G+ A L +W + +D LRP L Sbjct: 243 LFWGTMMGFASFIPLVGTALIWIPATIYLFLIGDTTWAIFLGVWSVAVVGSIDNLLRPLL 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G + L FF L+GG++ GL+GL GP++ A+ V++ Sbjct: 303 MQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFN 345 >gi|212702630|ref|ZP_03310758.1| hypothetical protein DESPIG_00658 [Desulfovibrio piger ATCC 29098] gi|212673902|gb|EEB34385.1| hypothetical protein DESPIG_00658 [Desulfovibrio piger ATCC 29098] Length = 367 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 45/308 (14%) Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F AV+ +S + L + P + G+ ++EL AN +P P W+ M Sbjct: 85 FSAVVIPISTLVLLVSPQV---AGGLARLRELQ-----ANNFQLP-PEWV------MRFQ 129 Query: 121 ELWTKHLSHPQSLKILSE-------------TFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 EL +P+ K++SE L +D + + +FL L++ Sbjct: 130 ELRHSLADYPKVDKMISEFLSNLDAMLADTMGLLINRSVDVLGGTMTVLWTLFLFVTLTV 189 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 IF A S + + H+ ++ + + ++ LG+ ++AI +G+ Sbjct: 190 IFAAYA---------SRINLITARIFHIPATMLRRFVLAIRRALQGVMLGIVLVAIAQGV 240 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G + +AG+ G++ ++A IP G + + + + L G A L LWG Sbjct: 241 LCGIGFAVAGIKQPAFWGLLATVVAPIPFVGTALVWGPLCLSLWFSGATMPAVGLALWGT 300 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + VD LRP + I PF ++ G+ + G +GL IGPVL+A+ ++ Sbjct: 301 LAVTSVDNILRPLFLQQGINAPFFVLIIAILCGLGSFGPMGLIIGPVLLAI-------AM 353 Query: 347 MAIKENKE 354 A++E + Sbjct: 354 QAVEEAHQ 361 >gi|238791674|ref|ZP_04635311.1| hypothetical protein yinte0001_13870 [Yersinia intermedia ATCC 29909] gi|238728778|gb|EEQ20295.1| hypothetical protein yinte0001_13870 [Yersinia intermedia ATCC 29909] Length = 367 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 78/358 (21%), Positives = 154/358 (43%), Gaps = 28/358 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-TVSVMCLF 74 IM +I+ S + ++ F A ++ +WP+ + K +LAVI T+ ++ LF Sbjct: 21 IMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIR-LQKLLWGKRWLAVIVMTLLLILLF 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQS 132 ++P+ L + L+ + +P WL IP G S T + Sbjct: 80 VIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQSIPMVGNKLYSSWHTLVAGGGNA 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQL 188 + + ++ + + A+ G + L ++F ++ F + G I + Sbjct: 140 MIAKVQPYIGAAATWLVAQ-AAHVGYFLIHLALMVLFSVLLYFHGEQVGLGIRHFAVRAA 198 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D G+ + + K IR+ LG+ + A+ + ++ G +AG+ V+ Sbjct: 199 DKRGD--------GVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLM 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I + G + I+L G+ T L +W I + +D LRP+L+ +P Sbjct: 251 FICCVAQLGPLLILVPAIIWLYWTGDTTWGTALLIWSCI-VGTMDNVLRPYLIRMEADMP 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIW-------KESIMAIKENKEKI 356 + G++GG+ + G++GLFIGPV++A+ + W +ESI + ++ E++ Sbjct: 310 MILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESIQEVAKHLEEL 367 >gi|238787117|ref|ZP_04630917.1| hypothetical protein yfred0001_6030 [Yersinia frederiksenii ATCC 33641] gi|238724905|gb|EEQ16545.1| hypothetical protein yfred0001_6030 [Yersinia frederiksenii ATCC 33641] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 78/351 (22%), Positives = 153/351 (43%), Gaps = 20/351 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IATVSVMCLF 74 IM +I+ S + ++ F A ++ +WP+ + K +LAV + T+ ++ LF Sbjct: 21 IMIMIVASFWVVQPFVMGFAWAGMVVIATWPLLVR-LQKLLWGKRWLAVMVMTLLLILLF 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQ 131 ++P+ L + L+ + +P WL IP M ++L W ++ Sbjct: 80 VIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQTIP--MVGNKLYSGWHTLIAGGG 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQ 187 ++ I + ++ A+ G + L ++F I+ F + G +I + Sbjct: 138 NVLIAKIQPYIGASVTWLVAQAAHVGYFLIHLALMLLFSILLYFHGEQVGLAIRHFAVRA 197 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 D G+ + + K IR+ LG+ + A+ + ++ G LAGV V+ Sbjct: 198 ADKRGD--------AVVVLAAKAIRAVALGVVVTALVQSVLGGIGLALAGVQYATLFTVL 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + G + I+L G+ T L +W I + +D LRP+L+ + Sbjct: 250 MFVCCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCI-VGTMDNVLRPYLIRMEADM 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 309 PMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESITE 359 >gi|254516312|ref|ZP_05128371.1| hypothetical protein NOR53_2523 [gamma proteobacterium NOR5-3] gi|219674735|gb|EED31102.1| hypothetical protein NOR53_2523 [gamma proteobacterium NOR5-3] Length = 368 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 156/329 (47%), Gaps = 14/329 (4%) Query: 15 MIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++M + L+F + GF +L A + ++P+YS + +T +++ + + Sbjct: 17 LVMTLAYTGLFFAMISGFAMALLLAAVFSGIAYPLYSWLSNVWGGRNTLASLMTLLISLL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQ 131 +VPL+ L + E+ +V + + + S +PG + +A EL P Sbjct: 77 AIVVPLMLLLGLVADQALEVAEEVTPWIEQQLDQSQEPSALPGWVPYAEEL------EPY 130 Query: 132 SLKILSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +I+++ F G+ ++ S + + L++ ++ A+FFF G ++ +++ Sbjct: 131 RDRIMAKVAEFAGNAGV-YLASGLSTLTQGTMSFFLNLFVILYAMFFFLISGSALIEKIM 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S L K+ ++ V R+T G II +G + G + +AG+ + V G + A Sbjct: 190 SYA-PLSRVDKDKMLQVGLSVSRATVKGTLIIGAIQGALGGLGFAVAGIDAAVFWGAVMA 248 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++++PG GA + + ++LLI G L W A + +D LRP LVG ++P Sbjct: 249 VLSILPGIGATLVWAPAVVFLLISGETLVGLGLLAWSAGVVGTIDNFLRPILVGRDTEMP 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +GG+ G+ GL +GP+L AL Sbjct: 309 DLLILLSTLGGLGLFGVAGLVLGPILAAL 337 >gi|71909098|ref|YP_286685.1| hypothetical protein Daro_3486 [Dechloromonas aromatica RCB] gi|71848719|gb|AAZ48215.1| Protein of unknown function UPF0118 [Dechloromonas aromatica RCB] Length = 375 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 11/346 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +I +S++ L F A + A++I +WP++ S S+ V+ +V+++ L + Sbjct: 17 ILGLIGLSVWVLLPFLAATVWAVMIVVATWPLFKSLESRLGNRRAPAVVLMSVAMLLLLV 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSL 133 +PL + +L + +G+P P W+ +P G + W + + S Sbjct: 77 LPLWLAVDTIIEHSGQLAAAGKSMAANGLPPPPAWVKTLPLVGDRVASAWAQLDAAGTSG 136 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + T + ++ A G + + + L + I Y G + ++ G Sbjct: 137 IVTKVTPYAADTGKWVLAQAGSVGGMLIQFLLVVTIAAI----LYSGGETGARTARRFGR 192 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + + IR LG+ + AI + ++ G +AGVP L + ++ + Sbjct: 193 RLAGDRGENSIILAGQAIRGVALGVGVTAIVQTVLGGVGLAVAGVPFASLLSAVMLMLCI 252 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + ++ G+ AT L +W I + +D LRP L+ LP L F Sbjct: 253 AQIGPMLVLLPAVGWMYWMGDSGWATLLLVWSLI-VGSLDNFLRPMLIKRGADLPLLLIF 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKI 356 G++GG+ + GL+G+F+GPV++A+ + + W E + K+ E I Sbjct: 312 AGVIGGMLSFGLIGIFVGPVVLAVTYTLTLAWIEDALG-KDEPESI 356 >gi|238749448|ref|ZP_04610953.1| hypothetical protein yrohd0001_27650 [Yersinia rohdei ATCC 43380] gi|238712103|gb|EEQ04316.1| hypothetical protein yrohd0001_27650 [Yersinia rohdei ATCC 43380] Length = 367 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 74/354 (20%), Positives = 151/354 (42%), Gaps = 19/354 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +IL S + ++ F A ++ +WP+ + +I T+ ++ LF+ Sbjct: 21 ILIMILASFWVIQPFVMGFAWAGMVVIATWPLLIRLQNLLWGKRWLAVIIMTLLLVLLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSL 133 +P+ L + L+ + +P WL IP G S +T +L Sbjct: 81 IPIGLLVSSLVENSGPLIQWASSPSNLRMPDVTWLKTIPMVGDKLYSGWYTLIAGGGNAL 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQLD 189 + ++ + ++ A+ G + L ++F ++ F + G I + D Sbjct: 141 IAKVQPYIGA-AVTWLVAQAAHVGYFLIHMALMLLFSVLLYFHGEQVGLGIRHFAVRAAD 199 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 G+ + + K IR+ LG+ + A+ + ++ G LAG+ L V+ Sbjct: 200 KRGD--------AVVVLAAKAIRAVALGVVVTALVQAVLGGIGLALAGIQYATLLTVLMF 251 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I + G + I+L G+ T L +W I + +D LRP+L+ +P Sbjct: 252 ICCVAQLGPLLILIPAIIWLYWTGDNTWGTILLVWSCI-VGTMDNVLRPYLIRMEADMPM 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKISSNF 360 + G++GG+ + G++GLFIGPV++A+ + W +E+ ++++ + Sbjct: 311 ILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESLQEVAKHL 364 >gi|313206604|ref|YP_004045781.1| hypothetical protein Riean_1114 [Riemerella anatipestifer DSM 15868] gi|312445920|gb|ADQ82275.1| protein of unknown function UPF0118 [Riemerella anatipestifer DSM 15868] gi|315022099|gb|EFT35128.1| hypothetical protein RAYM_06367 [Riemerella anatipestifer RA-YM] gi|325335954|gb|ADZ12228.1| protein of unknown function UPF0118 [Riemerella anatipestifer RA-GD] Length = 373 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 9/211 (4%) Query: 135 ILSE---TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF---FYRDGFSISQQL 188 ILSE L +D + A + L L+ + +I++ +F F I +++ Sbjct: 119 ILSEIQIDILSKENLDKVKETAGQLSTTILSSTLNTVTIIVSTYFLLYFMLVKPRIFERI 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L IS + K+I + +G+ ++A G+GL Y + G PS + L +T Sbjct: 179 LTNAAPLKRTNINLISEKIRKMIIANAIGIPVVAFGQGLAALVGYLIFGAPSVILLFALT 238 Query: 249 AIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I +MIP GGA I + V+++++ +G+ + L ++ + + ++D LR L+ Sbjct: 239 TIASMIPIVGGALI-YVPVALFMIAEGDTVSGVGLAIYCLVVVGLIDNVLRFTLLKKLED 297 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + L T FG++ G+ G +GL GP+L+++ Sbjct: 298 IHPLNTVFGIILGMNLFGFMGLVFGPILVSV 328 >gi|300716475|ref|YP_003741278.1| hypothetical protein EbC_18970 [Erwinia billingiae Eb661] gi|299062311|emb|CAX59428.1| uncharacterized protein [Erwinia billingiae Eb661] Length = 376 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 10/218 (4%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 +T+G F+ A FG + L ++F ++ Y G + + L Sbjct: 152 RTSG--FLFAQAGHFGRFMMHLGLMLLFSVL----LYARGEQVGHGIRHFAFRLASRRGD 205 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + IR+ LG+ + A+ +GL+ G ++G+P L V+ + ++ G + Sbjct: 206 AAVLLAGQAIRAVALGVVVTALVQGLLGGIGLAISGIPYATVLTVVMILSCLVQLGPLVV 265 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++L G+ T L +W + + +D LRP L+ LP + G++GG+ Sbjct: 266 LIPAIVWLYWTGDTTWGTVLLIWSCV-VGTLDNVLRPMLIRMGADLPMILILSGVIGGLI 324 Query: 322 TMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKI 356 G++GLFIGPV++A+ + +W A +++ ++ Sbjct: 325 AFGMIGLFIGPVVLAVSYRLVSVWVHEAPAPEDDPLEV 362 >gi|303327143|ref|ZP_07357585.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3] gi|302863131|gb|EFL86063.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3] Length = 368 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%) Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 G+ ++EL AN +P P+W+ I + W L+ S++ FL Sbjct: 107 GLARLRELQ-----ANNFQLP-PQWVEHI-------QHWRLSLTEYPSIEKAVNDFLHNL 153 Query: 145 GI---DFIPRFASR----FGMIFLDYCLSIIFMIIALFF--FYRDGFSISQQLDSLGEHL 195 D + SR G + + +F+ + + F + R ++ ++ L + L Sbjct: 154 DTLFGDAVTMLVSRSFGFLGGTMTAFWTTFLFLTLTVLFTVYSRRIRKVTCRIFHLPQAL 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + I R +R LG+ ++A+ +G + G + +AG G++ ++A IP Sbjct: 214 LRRFISAIHR----ALRGIMLGIVLVALAQGFLCGIGFAVAGFNQPAFWGMLATLVAPIP 269 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + + + + L G A L LWG + + VD LRP + IK PF Sbjct: 270 VVGTALVWLPLCLSLWFTGKTMAAVGLALWGMLAVAGVDNVLRPLFLRQGIKAPFFVLIL 329 Query: 315 GLVGGVRTMGLLGLFIGPVLMA 336 ++ G+ + G +GL GPVL+A Sbjct: 330 AILCGLASFGPVGLIAGPVLLA 351 >gi|308186662|ref|YP_003930793.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] gi|308057172|gb|ADO09344.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] Length = 372 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 14/245 (5%) Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS-----LKILSETFLKTNGIDFIPRF 152 + H +P WL D+P M +L+ + + S + + +T G F Sbjct: 101 VTQGHTMPQLLWLRDVP--MVGKKLYVSYDTLVASGGAGIMAKIQPYIGRTTG--FFVAQ 156 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A FG + + ++F ++ Y G +Q + + + + IR Sbjct: 157 AGHFGRFMIHLGVMLLFSVL----LYWRGEQAAQGIRHFAFRMAGRRGDAAVLLAAQSIR 212 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + LG+ + A+ +G++ G ++G+P L V+ + ++ G + IYL Sbjct: 213 AVALGVVVTALVQGVLGGIGLAISGIPYATLLTVLMILCCLVQLGPLLVLVPAIIYLYWS 272 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G+ T L +W + + +D LRP L+ LP + G++GG+ G++GLFIGP Sbjct: 273 GDTTWGTVLLVWSCV-VGTMDNVLRPMLIRMGADLPMILILSGVIGGLFAFGMIGLFIGP 331 Query: 333 VLMAL 337 V++A+ Sbjct: 332 VVLAV 336 >gi|332182085|gb|AEE17773.1| protein of unknown function UPF0118 [Treponema brennaborense DSM 12168] Length = 407 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 23/249 (9%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKI----LSETFLKTNGIDFIPRFASRF---GM 158 V +++ P + +SE+ L + L+ T L+TN I FI +++SR G Sbjct: 141 VEDFINRNPDFLTSSEIGKSVLGFIDRFNLDFIDLNSTDLRTNLIKFIQQYSSRIVSTGA 200 Query: 159 IFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 L ++ +S++F+ AL+F + DG ++ L + P Y + + ++ R Sbjct: 201 TVLSSTGNFLVSVLFVTFALYFCFLDGRYLASLLAQ-AIPINPQYMSALMKKFAEITRHL 259 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGA----PISFTAVSIY 268 F G ++A+ +G + V + VI + IP G A P+ + Sbjct: 260 FSGYILVALYQGFAAFIIMSIFRVQGSLLFAVILMFASFIPLFGAALVWLPMGIVICATD 319 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+KG +F C I + +D LRP + IK+ L FF ++GG++ G+ GL Sbjct: 320 SLLKGILFLVLC-----GICVSFLDNFLRPMFLKDRIKVHPLVIFFAILGGLKVFGMNGL 374 Query: 329 FIGPVLMAL 337 +GP+++ L Sbjct: 375 LLGPMIIIL 383 >gi|145598044|ref|YP_001162120.1| putative inner membrane protein [Yersinia pestis Pestoides F] gi|108775672|gb|ABG18191.1| membrane protein [Yersinia pestis Nepal516] gi|108779660|gb|ABG13718.1| putative membrane protein [Yersinia pestis Antiqua] gi|145209740|gb|ABP39147.1| membrane protein [Yersinia pestis Pestoides F] Length = 346 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/346 (19%), Positives = 147/346 (42%), Gaps = 12/346 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 M +I+ S + ++ F A ++ +WP+ + V+ T+ ++ LF++ Sbjct: 1 MGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILLFVI 60 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP---GGMWASELWTKHLSH-PQS 132 P+ L + L+ + +P W+ IP +++S W +S + Sbjct: 61 PIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSS--WNTLISGGANA 118 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + ++ F+ + A+ G + L ++F ++ Y G ++ + Sbjct: 119 LMAKVQPYIGATATWFVAQ-AAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHFA 173 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 174 MRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICC 233 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 234 VAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMILI 292 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 293 LSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 338 >gi|310767540|gb|ADP12490.1| putative inner membrane protein [Erwinia sp. Ejp617] Length = 374 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 +T G F A FG + L ++F ++ Y G + + L Sbjct: 148 RTTGFFFAQ--AGHFGRFMMHLGLMLLFSVL----LYWRGEQVGLGIRHFAFRLASRRGD 201 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + IR+ LG+ + A+ +G++ G ++G+P L V+ + ++ G I Sbjct: 202 AAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAVSGIPFATILTVLMILSCLVQLGPLIV 261 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I+L G+ T L +W + + +D LRP L+ LP + G++GG+ Sbjct: 262 LVPAIIWLYWSGDTTWGTVLLIWSCV-VGTLDNVLRPMLIRMGADLPMILILSGVIGGLV 320 Query: 322 TMGLLGLFIGPVLMAL---IAVIWKESIMAIKEN 352 G++GLFIGPV++A+ + +W A EN Sbjct: 321 AFGMIGLFIGPVVLAISYRLVSVWVHETPAPHEN 354 >gi|78357491|ref|YP_388940.1| hypothetical protein Dde_2448 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219896|gb|ABB39245.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 415 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 73/331 (22%), Positives = 143/331 (43%), Gaps = 47/331 (14%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A+++ +P+Y+ + + S LA +A + +C+ I LF+F G++ + V V Sbjct: 78 AIVLSAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPLFIFVTGLI--PQAVQSV 135 Query: 97 VLANQHGIPVPRWLSDIP------GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 N W++ G L H P F+ + ID Sbjct: 136 TAVNN-------WINHTDFDQLFGAGRLEQYLAWVHQHLP---------FIDASKIDLRA 179 Query: 151 RFAS---RFGMIFLD---YCLS--------IIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F S R G L+ Y L + M++ +FF +DG + Q + +++ Sbjct: 180 EFISFSRRMGQTLLEGGTYLLGNALTLFFQFLLMLLIVFFMLKDGKKMLQVV----KYMC 235 Query: 197 PAYWKKISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P + + I+ V +S +G ++A +GL G L G+P+ + G + ++ Sbjct: 236 PLHEDQEDAILLNLRSVSKSVLVGGLLVAALQGLAGGIGLALVGIPA-LFWGTVMGFASL 294 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + +YLL+ G ++ LF+W A+ + +D LRP+ + G + Sbjct: 295 VPVVGTGLVWMPACLYLLLMGQWQSSLFLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFI 354 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++GG++ G+ G+ GP+++ V+ + Sbjct: 355 FMSIMGGIKVFGMAGVLYGPLILGFTMVMLR 385 >gi|259908561|ref|YP_002648917.1| putative inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224964183|emb|CAX55690.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283478527|emb|CAY74443.1| UPF0118 inner membrane protein ydiK [Erwinia pyrifoliae DSM 12163] Length = 374 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 +T G F A FG + L ++F ++ Y G + + L Sbjct: 148 RTTGFFFAQ--AGHFGRFMMHLGLMLLFSVL----LYWRGEQVGLGIRHFAFRLASRRGD 201 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + IR+ LG+ + A+ +G++ G ++G+P L V+ + ++ G I Sbjct: 202 AAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAVSGIPFATILTVLMILSCLVQLGPLIV 261 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I+L G+ T L +W + + +D LRP L+ LP + G++GG+ Sbjct: 262 LVPAIIWLYWSGDTTWGTVLLIWSCV-VGTLDNVLRPMLIRMGADLPMILILSGVIGGLV 320 Query: 322 TMGLLGLFIGPVLMAL---IAVIWKESIMAIKEN 352 G++GLFIGPV++A+ + +W A EN Sbjct: 321 AFGMIGLFIGPVVLAISYRLVSVWVHETPAPHEN 354 >gi|260654239|ref|ZP_05859729.1| putative membrane protein [Jonquetella anthropi E3_33 E1] gi|260630872|gb|EEX49066.1| putative membrane protein [Jonquetella anthropi E3_33 E1] Length = 354 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 16/191 (8%) Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTF 215 +F D CL++ FF RDG S+++ L P K+ R+ VIRST Sbjct: 165 LFADSCLALYMA----FFLIRDGGSLAEIL----IKALPLGDKRERRLFETFVGVIRSTV 216 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 G ++A G++ G+ + GV +++++P G + + +SIY+ GN Sbjct: 217 KGNVLMAFLHGVIGAVTLGFLGMNGLLLWGVAMGVLSLVPLVGTAVVWLPLSIYMASSGN 276 Query: 275 IFNATCLFLWGA--IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 C FL G + VD LRP +VG +++P +GG+ + GL G+ GP Sbjct: 277 WTG--CFFLAGVEIAAMVGVDNVLRPAMVGRSLQMPDYLVLLSTLGGLASFGLGGMIAGP 334 Query: 333 VLMALIAVIWK 343 ++ AL WK Sbjct: 335 LVAALFVSAWK 345 >gi|242399644|ref|YP_002995069.1| Predicted permease [Thermococcus sibiricus MM 739] gi|242266038|gb|ACS90720.1| Predicted permease [Thermococcus sibiricus MM 739] Length = 328 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 23/197 (11%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQL--------DSLGEHLFPAYWKKISRIVPKVIRS 213 Y L ++ + + F + I +Q+ + LGE L K+ + +IR+ Sbjct: 134 KYLLQLVIFLAMFYTFLVNSDRIKKQIYLLIPRGHEDLGEKLL----KRADVTLQALIRA 189 Query: 214 TFLGMTIIAIGEGLVLGSAYW---LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIY 268 L + I +G ++ +W + +P+ + G++T + + IP G I A +I+ Sbjct: 190 WLL----LNIAKGALMTLGFWGFGITDIPTALLAGLLTMLFSFIPLFEGWMIWVVA-AIF 244 Query: 269 LLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LL +G++ A + ++GA+ + + D T+RP LV KL + G++GGV G+ G Sbjct: 245 LLKQGDVLKAIAISIYGAVLVSPLPDFTIRPKLVAKEAKLDEIMVLIGMIGGVWAFGVKG 304 Query: 328 LFIGPVLMALIAVIWKE 344 L IGP+++ L++ + KE Sbjct: 305 LIIGPIILNLVSALLKE 321 >gi|323698189|ref|ZP_08110101.1| protein of unknown function UPF0118 [Desulfovibrio sp. ND132] gi|323458121|gb|EGB13986.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans ND132] Length = 368 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + + M+ LF+F RDG + + L L P I + +V R +G ++A+ Sbjct: 174 MHFLLMVFILFYFMRDGTKMVAYIKRLSP-LKPKQEDYIIDSLKRVARGVLMGCLLVAVL 232 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLF 282 +G G +AG+P+ G + A+ ++IP G + AV YL + G A L Sbjct: 233 QGFAGGVGLAVAGIPAFF-WGGMMALSSLIPVLGTGLVWVPAVG-YLFLSGQWKMAIFLA 290 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LW I + +D LRP + ++ F ++GG+ + G+LG+F GP++++ + V+ Sbjct: 291 LWCGIFVVGIDTILRPIFMREASRVSTFYIFIAILGGIYSFGMLGIFYGPLILSFVMVML 350 Query: 343 KESIMAIKENKEKISSN 359 + + ++E + + + Sbjct: 351 Q---LYLEEYADDLDDH 364 >gi|218780815|ref|YP_002432133.1| hypothetical protein Dalk_2975 [Desulfatibacillum alkenivorans AK-01] gi|218762199|gb|ACL04665.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 358 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 9/157 (5%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIG 224 + M+ ALF+F RDG Q HL P + +I +V RS F G + A+ Sbjct: 168 VLMLFALFYFLRDGV----QALRWAMHLSPLKQSLENEIIDCFKEVSRSAFYGTFLTAVA 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 +G++ G + AG+P + GV+ A +M+P G + + +I L G I +A L + Sbjct: 224 QGVLGGIGLFFAGLPP-LTWGVVMAFFSMVPVIGTALVWVPATILLYATGKIGSAIFLAI 282 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 W + + D LRP L+ G +L L FF L+GG+ Sbjct: 283 WCMVVVGASDNVLRPLLMRGKNELHPLLIFFSLLGGL 319 >gi|90410495|ref|ZP_01218511.1| putative membrane protein [Photobacterium profundum 3TCK] gi|90328736|gb|EAS45020.1| putative membrane protein [Photobacterium profundum 3TCK] Length = 379 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 38/351 (10%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLA 63 + +R ++FI++V Y +K F PVL II P+ + ++ S+T LA Sbjct: 25 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALLPLTQKLEAMLGGRRGLSATILA 84 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASE 121 ++ + L + P + L + + ++ VV + IP P + ++DIP G E Sbjct: 85 LLG----ITLLVAPFV-LVSGSIFDAVTHLTDVVQSGDIKIPGPTQRIADIPVIGDKLFE 139 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI--FLDYCLSIIFM-IIALFF-- 176 +W+ L T L+ F+P + G + + L+ + M II+L Sbjct: 140 VWS-----------LFSTNLEKAVTHFLPEIKTAVGTMASLVGSSLATLVMFIISLAIAA 188 Query: 177 -FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + S+ + ++ + + ++ + + IRS LG+ +A + +++G+ ++ Sbjct: 189 GFMTHSKACSEAIGTVAVRVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQSMLVGAGMFV 248 Query: 236 AGVPSH--VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GVP+ + LGV+ +A +P A I V Y+ + +AT +W + I D Sbjct: 249 FGVPAAGLITLGVLILGIAQLP--ALIIVAPVIFYVFSTQDTTSATIFTVW-VLLAGISD 305 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+P L+G + +P G +GG+ G++GLF+G V++A IW E Sbjct: 306 NFLKPMLMGRGVDVPMPVILIGAIGGMLAAGIIGLFLGAVVLA----IWYE 352 >gi|297570117|ref|YP_003691461.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] gi|296926032|gb|ADH86842.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] Length = 379 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 18/192 (9%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDG-------FSISQQLDSLGEHLFPAYWKKISR 205 AS + + + L I+ +FF + F +S D LF + Sbjct: 146 ASTWAANLMMFVLGFFLTIVTIFFLLMEHDRLLNYIFRLSPLPDDQERQLFAKF------ 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 ++ + +G I A+ +G++ G +W + V G I A++A +P G + Sbjct: 200 --DEITGAVLIGNGICAVIQGIIGGLIFWAFNLGPPVLWGAIMAVLAFLPIVGIGLVMVP 257 Query: 265 VSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++LLIKGN+ +A L L+G I LFI + L+P LVG K+ L F ++GG+ T Sbjct: 258 TVLFLLIKGNLVDAILLAILYGIITLFI-ESLLKPKLVGDRAKMHILLVFLSIIGGLNTF 316 Query: 324 GLLGLFIGPVLM 335 G LG+ GP+++ Sbjct: 317 GFLGIIYGPLIV 328 >gi|54308755|ref|YP_129775.1| hypothetical protein PBPRA1562 [Photobacterium profundum SS9] gi|46913185|emb|CAG19973.1| putative membrane protein [Photobacterium profundum SS9] Length = 373 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 84/352 (23%), Positives = 161/352 (45%), Gaps = 40/352 (11%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLA 63 + +R ++FI++V Y +K F PVL II P+ + ++ S+T LA Sbjct: 19 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALLPLTQKLQNMLGGRRGLSATILA 78 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP--GGMWAS 120 ++ + L + P + L + + ++ +V + + I P + ++DIP GG Sbjct: 79 ILG----ITLLVAPFV-LVSGSIFDAVTHLTDIVQSGEIKISGPTQRIADIPVIGGKL-F 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFF- 176 E+W+ L T L+ F+P + G + S++ II+L Sbjct: 133 EVWS-----------LFSTNLEKAVTHFLPEIKTAVGAMASLVGSSLASLVMFIISLAIA 181 Query: 177 --FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + S+ + ++ + + ++ + + IRS LG+ +A + +++G+ + Sbjct: 182 AGFMTHSIACSEAIGTVAVRVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQSMLVGAGMF 241 Query: 235 LAGVPSH--VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GVP+ + LGV+ +A +P A I V Y+ + +AT +W + I Sbjct: 242 VFGVPAAGLITLGVLILGIAQLP--ALIIVAPVIFYVFSTQDTTSATIFTVW-VLLAGIS 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D L+P L+G + +P G +GG+ G++GLF+G V++A IW E Sbjct: 299 DNFLKPMLMGRGVDVPMPVILIGAIGGMLAAGIIGLFLGAVVLA----IWYE 346 >gi|304309717|ref|YP_003809315.1| Predicted permease PerM family [gamma proteobacterium HdN1] gi|301795450|emb|CBL43648.1| Predicted permease PerM family [gamma proteobacterium HdN1] Length = 414 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 L+ + + FFF RDG ++ QL LG+ A + + V+R+T G + Sbjct: 161 VLNAVLALYVGFFFLRDGEQLTVQLIRALPLGD----ARERLLLDRFAGVMRATIKGTLV 216 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 +A+ +G + G A+ G+ + G + I ++IP GA + + V++Y L G+ + Sbjct: 217 VALVQGALGGLAFAALGISGALLWGGVMVIASLIPAVGAALIWAPVAVYSLATGDWVSGV 276 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L + G + +VD LRP LVG ++P +GG+ G+ GL IGP++ AL Sbjct: 277 VLIVVGVGVIGMVDNLLRPILVGRDTQMPDYLVLLSTLGGLALFGMNGLIIGPIIAALFI 336 Query: 340 VIWK 343 W+ Sbjct: 337 AFWE 340 >gi|304397632|ref|ZP_07379509.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304354804|gb|EFM19174.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 372 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 19/269 (7%) Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS-----LKILSETFLKTNGIDFIPRF 152 + H +P WL +IP M +L+ + + S + + +T G F Sbjct: 101 VTQGHTMPKLTWLREIP--MVGKKLYVSYDTLVASGGAGVMAKIQPYIGRTTG--FFVAQ 156 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A FG + + ++F ++ Y G +Q + + + + IR Sbjct: 157 AGHFGRFMIHLGVMLLFSVL----LYWRGEQAAQGIRHFAFRMAGRRGDAAVLLAAQSIR 212 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + LG+ + A+ +G++ G ++G+P L V+ + ++ G + IYL Sbjct: 213 AVALGVVVTALVQGVLGGIGLAISGIPYATLLTVLMILCCLVQLGPLLVLVPAIIYLYWS 272 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G+ T L +W + + +D LRP L+ LP + G++GG+ G++GLFIGP Sbjct: 273 GDTTWGTVLLVWSCV-VGTMDNVLRPMLIRMGADLPMILILSGVIGGLFAFGMIGLFIGP 331 Query: 333 VLMAL---IAVIWKESIMAIKENKEKISS 358 V++A+ + +W A +K+ ++S Sbjct: 332 VVLAVSYRLVSVWVHE--APAPDKDPMAS 358 >gi|325497136|gb|EGC94995.1| inner membrane protein [Escherichia fergusonii ECD227] Length = 372 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/330 (21%), Positives = 151/330 (45%), Gaps = 18/330 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F + A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 25 MIVACLWIVQPFILGITWAGTVVIATWPVLLRLQKILFGRRSLAVLVMTLLLVMVFIIPI 84 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 85 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 141 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 142 AKVRPYIGTTTTWFVGQ-AAHLGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 197 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 256 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 257 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G++GG+ G++GLFIGPVL+ AV W+ Sbjct: 315 SGVIGGLIAFGMIGLFIGPVLL---AVTWR 341 >gi|226330354|ref|ZP_03805872.1| hypothetical protein PROPEN_04271 [Proteus penneri ATCC 35198] gi|225201149|gb|EEG83503.1| hypothetical protein PROPEN_04271 [Proteus penneri ATCC 35198] Length = 370 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/325 (22%), Positives = 142/325 (43%), Gaps = 11/325 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F I+ S + L F + A +I +WP+ I K+ + +I + ++ +F+ Sbjct: 20 ISFFIIASFWILNPFIVGFIWAGMIVVATWPLLL-IIEKRVKYRWLSTMIMMILILLIFV 78 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +P++ L + L+ + P WL+D+P M S L+ S+ + Sbjct: 79 IPIILLISSVIDNSAPLIELAKSPSNIQPPQLLWLNDVP--MIGSSLYDTW----HSILV 132 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + ++ + A+ F L+ + L + M++ + G ++ L Sbjct: 133 SGGNALISKIQPYVGQAANWFFAQALNIGRFALHLGVMLLFSGLLFLQGENVVSWLRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + IR+ LG+ + A+ + +V G ++GVP L VI I Sbjct: 193 IRLAGQRGDAAILLASMSIRAVALGVVLTALIQAIVGGIGLAVSGVPYATVLTVIMFICC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + ++L G+ + +WG + +D LRP+L+ LP + Sbjct: 253 LAQIGPLLVLIPSVLWLFWTGDTTWGIVMVIWGG-AVATMDGVLRPYLIKMGADLPMVLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ T+G++GLFIGPV++A+ Sbjct: 312 LTGVIGGILTLGMIGLFIGPVVLAV 336 >gi|320539515|ref|ZP_08039182.1| putative inner membrane protein [Serratia symbiotica str. Tucson] gi|320030368|gb|EFW12380.1| putative inner membrane protein [Serratia symbiotica str. Tucson] Length = 366 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 4/155 (2%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + ++ G L+G+P+ L V+ I + G + I+ Sbjct: 210 QAIRAVALGVVVTALVQSVLGGIGLALSGIPAATWLTVLIFICCVAQLGPLLVLVPAIIW 269 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ AT L +W + + +D LRP L+ LP L G++GG+ GL+GL Sbjct: 270 LYWSGDTTWATVLVIWSCV-VATLDNVLRPMLIRMGADLPTLLILLGVIGGLLAFGLIGL 328 Query: 329 FIGPVLMAL---IAVIWKESIMAIKENKEKISSNF 360 FIGPV++A+ + W + + ++ N Sbjct: 329 FIGPVVLAVSYRLLTAWMDEAAKPTTTLQDVARNL 363 >gi|150377734|ref|YP_001314329.1| hypothetical protein Smed_5665 [Sinorhizobium medicae WSM419] gi|150032281|gb|ABR64396.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 362 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 81/326 (24%), Positives = 137/326 (42%), Gaps = 51/326 (15%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSD 112 ++ + F AV AT++V VPL+FL ++ + + A+ GIP +P W++ Sbjct: 67 RRLAAVIFGAVAATITV-----VPLIFLCSSVASQLGVAGAWLSAASTRGIPNLPEWVAG 121 Query: 113 IP-GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM------------- 158 +P G A+ W + L+ G++ + R+ + Sbjct: 122 LPLVGSKAAAAWQE---------------LQREGLELLERYQPQLAAAGRWLLNLGTGLL 166 Query: 159 -----IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 IF+ L+ IF + + + + G L A K IS + VI + Sbjct: 167 LAVLEIFVGVVLAAIFHASRTWALGFVSAIMVRIVGPKGPELLSAAGKAISGVAIGVIGT 226 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 L EG++ + +AGVP VAL T +A+I G + + V+I+L +G Sbjct: 227 ALL--------EGVLAWIGFVIAGVPGAVALAAATFFLAVIQIGPLLVWLPVAIWLGAEG 278 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + WG I L D ++P L+ +LP L F G++GG+ G G+FIG Sbjct: 279 QTGWAIFMVAWGIIVLMGTDNIVKPMLIARSGQLPMLVLFIGVIGGLAAWGFTGMFIGAT 338 Query: 334 LMALIAVIWKESIMAIKENKEKISSN 359 + AV+W + NK +S+ Sbjct: 339 TL---AVLWTVLQAWLGTNKGPVSAT 361 >gi|323968456|gb|EGB63862.1| ydiK protein [Escherichia coli M863] gi|327252805|gb|EGE64459.1| hypothetical protein ECSTEC7V_2050 [Escherichia coli STEC_7v] Length = 370 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/347 (21%), Positives = 156/347 (44%), Gaps = 18/347 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P Sbjct: 22 IMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIP 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKI 135 + L +++ + K + + +P WL+ IP + ++L+ +L I Sbjct: 82 I-ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGTKLYAGWHNLLDMGGTAI 138 Query: 136 LSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 139 MAKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFAT 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + + Sbjct: 194 RLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCL 253 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 254 VQLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ + W E + + E++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEV 358 >gi|218548727|ref|YP_002382518.1| inner membrane protein [Escherichia fergusonii ATCC 35469] gi|218356268|emb|CAQ88885.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324113453|gb|EGC07428.1| inner membrane protein ydiK [Escherichia fergusonii B253] Length = 370 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 72/331 (21%), Positives = 151/331 (45%), Gaps = 18/331 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I+ L+ ++ F + A + +WP+ + ++ T+ ++ +FI+P Sbjct: 22 IMIVACLWIVQPFILGITWAGTVVIATWPVLLRLQKILFGRRSLAVLVMTLLLVMVFIIP 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKI 135 + L +++ + K + + +P WL+ IP + ++L+ +L I Sbjct: 82 I-ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAI 138 Query: 136 LSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 139 MAKVRPYIGTTTTWFVGQ-AAHLGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFAT 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + + Sbjct: 194 RLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCL 253 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 254 VQLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G++GG+ G++GLFIGPVL+ AV W+ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLL---AVTWR 339 >gi|237803519|ref|ZP_04591104.1| putative lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025501|gb|EGI05557.1| putative lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 118 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%) Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + +AG+P + LG++T + ++IP G P+ + + +L+ +G A L +WG + Sbjct: 11 GFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAVFLGIWGMFIISG 70 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 VD L+P+L+ LP + G+ GG+ G +GLFIGP L+A Sbjct: 71 VDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLA 115 >gi|218705186|ref|YP_002412705.1| putative inner membrane protein [Escherichia coli UMN026] gi|293405185|ref|ZP_06649177.1| inner membrane protein [Escherichia coli FVEC1412] gi|298380829|ref|ZP_06990428.1| inner membrane protein [Escherichia coli FVEC1302] gi|300898531|ref|ZP_07116864.1| hypothetical protein HMPREF9552_02700 [Escherichia coli MS 198-1] gi|301026918|ref|ZP_07190314.1| hypothetical protein HMPREF9534_05215 [Escherichia coli MS 69-1] gi|218432283|emb|CAR13173.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|291427393|gb|EFF00420.1| inner membrane protein [Escherichia coli FVEC1412] gi|298278271|gb|EFI19785.1| inner membrane protein [Escherichia coli FVEC1302] gi|300357795|gb|EFJ73665.1| hypothetical protein HMPREF9552_02700 [Escherichia coli MS 198-1] gi|300395265|gb|EFJ78803.1| hypothetical protein HMPREF9534_05215 [Escherichia coli MS 69-1] Length = 370 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/347 (21%), Positives = 156/347 (44%), Gaps = 18/347 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P Sbjct: 22 IMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIP 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKI 135 + L +++ + K + + +P WL+ IP + ++L+ +L I Sbjct: 82 I-ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAI 138 Query: 136 LSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 139 MAKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFAT 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + + Sbjct: 194 RLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCL 253 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 254 VQLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ + W E + + E++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEV 358 >gi|42523150|ref|NP_968530.1| putative permease [Bdellovibrio bacteriovorus HD100] gi|39575355|emb|CAE79523.1| putative permease [Bdellovibrio bacteriovorus HD100] Length = 371 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 11/320 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM-CLFIVPLLF 80 +SL+ L F ++ A +I +W + + + F AV+ +M L I+PL Sbjct: 23 ISLWVLLPFLPAMIWAAMIFIATWSTLLK-LQHRFNNKRFPAVLTMALLMTALVIIPLTA 81 Query: 81 LFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSLKILS 137 + + +VS + LAN P P WL D P G A+ + PQ L + Sbjct: 82 ALFSLISNRHVIVSGLQDLANTQLPPAPDWLEDAPLLGPRIAARWNELAATAPQDLIERA 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ ++I M+ + L+II I FY +G I+Q +L L Sbjct: 142 KPYIH-QAFEWIVASVGSITMLVVHCILTIIIASI----FYSNGEKIAQACRTLTRRLAG 196 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ ++ + +R+ +G+ A+ + + G LAGVP L + I ++ G Sbjct: 197 TRGEEALQLAAQSVRAVAMGIVGTALIQTALGGLGAGLAGVPHAGLLTAVILIFCVVQLG 256 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + +L + T L W A+ + ++D +RP L+ LP + G++ Sbjct: 257 PLLPLLGAVAWLYSQEQNTAGTILLGW-AVAVGLMDGFVRPILIKRGADLPAVLITVGVL 315 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG+ + G++GLFIGPV++A+ Sbjct: 316 GGMISFGIVGLFIGPVVLAV 335 >gi|15679222|ref|NP_276339.1| hypothetical protein MTH1211 [Methanothermobacter thermautotrophicus str. Delta H] gi|8928484|sp|O27279|Y1211_METTH RecName: Full=UPF0118 membrane protein MTH_1211 gi|2622321|gb|AAB85700.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 334 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 2/164 (1%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+F RDG + + +L + ++++ +V+ S F G + A+ GL+ + Sbjct: 154 FYFARDGKRLVGYIRTLIPEETRPFMERMASETERVLLSIFYGHFLTALAIGLMAAVGFH 213 Query: 235 LAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L G P + LG++T + +IP P ++T +SIY + GNI + ++G + L +D Sbjct: 214 LLGYPYAILLGIMTGLFQLIPVIGPWAAYTPLSIYDFVTGNILRGVLVLIFG-LFLSTID 272 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 LRP L G + + G +GG G+ G +GP+++ L Sbjct: 273 IYLRPKLSGKYADIHPMIFLVGFLGGPVVWGVAGFIVGPLVLGL 316 >gi|162419988|ref|YP_001607006.1| putative inner membrane protein [Yersinia pestis Angola] gi|162352803|gb|ABX86751.1| putative membrane protein [Yersinia pestis Angola] Length = 365 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/346 (19%), Positives = 148/346 (42%), Gaps = 12/346 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ LF+ Sbjct: 21 IMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP---GGMWASELWTKHLSHPQS 132 +P+ L + L+ + +P W+ IP +++S W +S + Sbjct: 81 IPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSS--WNTLISGGAN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++++ F+ + A+ G + L ++F ++ Y G ++ + Sbjct: 139 -ALMAKVQPYIGATWFVAQ-AAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 193 MRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 253 VAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 312 LSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 357 >gi|188533959|ref|YP_001907756.1| putative inner membrane protein [Erwinia tasmaniensis Et1/99] gi|188029001|emb|CAO96869.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] Length = 374 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/319 (21%), Positives = 138/319 (43%), Gaps = 20/319 (6%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 +WP+ F + + T+ ++ +FI+P+ L + L++ L + H Sbjct: 47 ATWPLMIKFQRLLWGKRSLAVITMTLLLILVFIIPVALLVNSLIENSGPLIAW--LGSGH 104 Query: 103 -GIPVPRWLSDIPGGMWASELWTKH--LSHPQSLKILSET---FLKTNGIDFIPRFASRF 156 +P +W+ IP + +L++ + L +L++ +T G F A F Sbjct: 105 LQMPELQWMRSIP--LVGRKLYSAYHNLVAGGGTALLAQVQPYIGRTTGFFFAQ--AGHF 160 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G + L ++F ++ Y G + Q + L + + IR+ L Sbjct: 161 GRFMMHLGLMLLFSVL----LYWRGEQVGQGIRHFAFRLASRRGDAAVLLAAQAIRAVAL 216 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G+ + A+ + ++ G ++G+P L V+ + ++ G + I+L G+ Sbjct: 217 GVVVTALVQAVLGGIGLAISGIPFATILTVLMILSCLVQLGPLVVLVPAIIWLYWSGDTT 276 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 T L +W + + +D LRP L+ LP + G++GG+ G++GLFIGPV++A Sbjct: 277 WGTVLLVWSCV-VGTLDNVLRPVLIRMGADLPMILILSGVIGGLIAFGMIGLFIGPVVLA 335 Query: 337 L---IAVIWKESIMAIKEN 352 + + +W A E+ Sbjct: 336 ISYRLVSVWVHEAPAPHED 354 >gi|34497807|ref|NP_902022.1| hypothetical protein CV_2352 [Chromobacterium violaceum ATCC 12472] gi|34103663|gb|AAQ60024.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 364 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/348 (18%), Positives = 150/348 (43%), Gaps = 11/348 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +++ L L+ F + A II ++WP+YS + A++ +++ Sbjct: 21 ILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLRLRGRHKLAALLIVLALSAAL 80 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELW-TKHLSHPQ 131 +P+ + + L + +P P WL+++P G +LW + P Sbjct: 81 AIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNLPVVGDSLQKLWQSTQADLPG 140 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + ++ + G+ L+ L+I + L +G + ++ + Sbjct: 141 FFEKVRPAI--NQAALWLLSGGANLGLSLLEIVLAIAVAGLLLI----NGDKLWDLVERI 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + ++ + IRS G+ A+ + ++ +AGVP + LG + I+ Sbjct: 195 VVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAGVPGALVLGFLCFIV 254 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+ + + + ++ G+ L +WG + + +D L+P L+ ++P Sbjct: 255 AVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILKPLLISQGAQMPLSV 314 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F G++GG+ G++GLFIGP L+A+ + + + +E+ E+++ Sbjct: 315 IFLGVIGGLIAWGVIGLFIGPTLLAVGLTMLRHWLQ--REDNEELACE 360 >gi|84393813|ref|ZP_00992559.1| putative permease [Vibrio splendidus 12B01] gi|84375553|gb|EAP92454.1| putative permease [Vibrio splendidus 12B01] Length = 361 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 153/352 (43%), Gaps = 49/352 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ K +++++ V + + ++PLL +F Sbjct: 32 YVNSIVMAFIISLLMFPIHEWLEKKLPNKENIVSLLSCVILTFIIVIPLLAVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + L +Q+ +W++ GG+ +HP +K LS +L + I+ Sbjct: 85 AAIVQQGSLFSQN---TYQWVTH--GGI------QTLFAHPLVVKALSFVNNYLPFDNIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PQAIAQKVGEFATSFGSKLVGISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + H+ P + K+ + +V +S +G + AI +G G W+AG P + G + Sbjct: 190 VVRHILPLSRSQEDKLLTEIEQVSKSAVMGSFLTAIAQGFAGGLGMWIAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G+ A L ++ + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAATYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG++ GL+GL GP++ A+ V I+ E ++K Sbjct: 309 MNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITIVLFNIYDEEFKDFLNQQDK 360 >gi|148979051|ref|ZP_01815296.1| putative permease [Vibrionales bacterium SWAT-3] gi|145962024|gb|EDK27312.1| putative permease [Vibrionales bacterium SWAT-3] Length = 361 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 49/352 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ K + +++++ V + + ++PLL +F Sbjct: 32 YVNSIVMAFIISLLMFPIHEWLEKKIPNKANLVSLLSCVILTFIIVIPLLAVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + L +Q+ +W++ GG+ HP +K LS +L + I+ Sbjct: 85 AAIVQQGSLFSQN---TYQWVTH--GGI------QTLFEHPIVVKALSFVNNYLPFDNIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PKAIAQKVGEFATSFGSKLVGISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + H+ P + ++ + +V +S +G + AI +G+ G W+AG P + G + Sbjct: 190 VVRHILPLSRSQEDKLLAEIEQVSKSAVMGSFLTAIAQGIAGGFGMWIAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G+ A L ++ + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG++ GL+GL GP++ A+ V I+ E ++K Sbjct: 309 MNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITIVLFNIYDEEFKDFLNQQDK 360 >gi|293605499|ref|ZP_06687881.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292816227|gb|EFF75326.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 354 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 79/342 (23%), Positives = 149/342 (43%), Gaps = 17/342 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SLY L+ F ++ A I +WP+ + ++ + A + + ++ + IV L+ Sbjct: 4 SLYVLQPFLPGLIWATTIVVATWPVLL-VVQQRCGGRRWAATVVMLLILLVVIVLPLYQV 62 Query: 83 YYGMLEMKELVSKVV--LANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSLKILSE 138 + E + V L + + P W+ +P G A E T + L E Sbjct: 63 ISTLAEHSGAIMDAVKRLPDYTLLAPPGWIRSVPVAGPKLAQEWQTLSDAGAGGLLARLE 122 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +L T ++ A+ G+ + ++I+ I Y G + ++ + L Sbjct: 123 PYL-TMAARWLLSHAAIVGVFVMHMLITIVISGI----LYSQGDAAAEFVKRFSNRLAGE 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI---P 255 R+ +R+ LG+ + A+ + + G W+AGVP A G++TA+M M+ Sbjct: 178 RGVAAVRLAGAAVRAVALGIVVTAVVQSALGGVGLWIAGVP---AAGILTALMVMLCLAQ 234 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + I+L A L +W A+ + ++D LRP L+ + L L G Sbjct: 235 LGPFLPMLGGVIWLFQNDMRLAAILLLVW-ALIVAMLDNLLRPMLIKRGVNLSLLLILSG 293 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++GG+ G++GLFIGPV++A+ + + K I + ++ Sbjct: 294 VLGGMFAFGIVGLFIGPVILAVTSTLLKAWIDEVPPPASTVA 335 >gi|254374014|ref|ZP_04989496.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571734|gb|EDN37388.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 346 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIVLKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTIMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 231 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 279 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 280 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 338 Query: 345 SIMAIKE 351 +M +E Sbjct: 339 KLMNNQE 345 >gi|170768895|ref|ZP_02903348.1| inner membrane protein YdiK [Escherichia albertii TW07627] gi|170122443|gb|EDS91374.1| inner membrane protein YdiK [Escherichia albertii TW07627] Length = 370 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 149/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G + L ++F + ++R G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGRFMMHCALMLLF---SALLYWR-GEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G +AGVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVAGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNIIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|86148147|ref|ZP_01066446.1| putative permease [Vibrio sp. MED222] gi|218710464|ref|YP_002418085.1| putative permease [Vibrio splendidus LGP32] gi|85834064|gb|EAQ52223.1| putative permease [Vibrio sp. MED222] gi|218323483|emb|CAV19660.1| putative permease [Vibrio splendidus LGP32] Length = 361 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 153/352 (43%), Gaps = 49/352 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ K +++++ V + + ++PLL +F Sbjct: 32 YVNSIVMAFIISLLMFPIHEWLEKKIPNKENVVSLLSCVILTFIIVIPLLAVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + L +Q+ +W++ GG+ +HP +K LS +L + I+ Sbjct: 85 AAIVQQGSLFSQN---TYQWVTH--GGI------QTLFAHPLVVKALSFVNNYLPFDNIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PQAIAQKVGEFATSFGSKLVGISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + H+ P + K+ + +V +S +G + AI +G G W+AG P + G + Sbjct: 190 VVRHILPLSRSQEDKLLTEIEQVSKSAVMGSFLTAIAQGFAGGLGMWIAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G+ A L ++ + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAATYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG++ GL+GL GP++ A+ V I+ E ++K Sbjct: 309 MNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITIVLFNIYDEEFKDFLNQQDK 360 >gi|328675713|gb|AEB28388.1| conserved hypothetical protein [Francisella cf. novicida 3523] Length = 341 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 135/307 (43%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+FL VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 54 RHKSSFLIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 109 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H ++ + + +N +P G + + ++ ++ Sbjct: 110 --YIGTTLQEHFDKLLNMVNQDKNMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVY 166 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 167 QFLVSSTSLEKFLKKIVLKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGCIMTITFSM 225 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F +Y+LI ++F ++GA + I+ Sbjct: 226 VGIPSPILFGFIAAIASMVP------FMVGIVYILIGASVF-----VIYGATKAIIILII 274 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 275 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 333 Query: 345 SIMAIKE 351 +M +E Sbjct: 334 KLMNNQE 340 >gi|299146703|ref|ZP_07039771.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|298517194|gb|EFI41075.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] Length = 341 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G I ++ +++ MI L+F G +++++ + Sbjct: 119 LGKDTLSFIMSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGG----KKMEAYVNDIL 174 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P ++ ++ +RS +G+ ++AI +G V Y L G P+ + LG +T + Sbjct: 175 PFNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLTCFATI 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ FNA LF +GAI + D +R L L T Sbjct: 235 IPMVGTALVWFPVATYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 IFGVVIGLPIFGFMGVIFGP 314 >gi|303246658|ref|ZP_07332936.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491998|gb|EFL51876.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 371 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 9/181 (4%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTII 221 ++ + +I LFF RDG ++ ++ +L P + RI + V +S LG +I Sbjct: 167 MNFVILIFVLFFLIRDGEAMLARV----RYLLPLSTDQEDRIFRQLDDVAKSVILGAFLI 222 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC 280 A+ +G G ++ G+ G + ++IP G I + V++YL++ G Sbjct: 223 ALAQGAAGGLGLFIVGIQPFF-WGCMMGFASLIPVVGTAIIWLPVALYLIVTGQWQWGVF 281 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L WGA+ + +D +RP L+ K+ F ++GG++ G LG+ GP+++ V Sbjct: 282 LIAWGALVVSSIDSIMRPILMRNRSKMSTFWVFLAIIGGIKFFGALGILYGPLVLGFAMV 341 Query: 341 I 341 + Sbjct: 342 M 342 >gi|150402189|ref|YP_001329483.1| hypothetical protein MmarC7_0262 [Methanococcus maripaludis C7] gi|150033219|gb|ABR65332.1| protein of unknown function UPF0118 [Methanococcus maripaludis C7] Length = 334 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 14/198 (7%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI----VPKVIRSTFLGMTI 220 + ++F+ F+F +DG + DS ++ P K+ ++I + K +++ F+G + Sbjct: 144 MKLLFLSFMTFYFLKDG---DRMQDSFMLYV-PTEKKENAKIFLNEIHKALKTLFIGNAV 199 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNA 278 ++ G + YWL G+P+ + LG ++ I+ ++P GG I + ++IY L+ G I Sbjct: 200 TSVIVGFISIIGYWLIGIPNPITLGALSGILNILPVVGGWTI-YVPLTIYYLLTGEIVKG 258 Query: 279 TCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L L+G I L + D +RP ++ L + G G+ GL IGP+++A Sbjct: 259 ILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPAFVLIAFLIGPLVFGIPGLAIGPIIVAT 318 Query: 338 IAVIWKESIMAIKENKEK 355 + I K + EN+EK Sbjct: 319 VYAIHK--VRKSIENREK 334 >gi|329115312|ref|ZP_08244066.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] gi|326695291|gb|EGE46978.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] Length = 360 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 114/230 (49%), Gaps = 6/230 (2%) Query: 123 WTKHLSHPQSLKILSETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +HL + + + I+ + + + I ++ +A GM+ + + L++I + + F + Sbjct: 135 WWQHLQNMKPMDIVQQAVPQPDQIMHYLMSYAGSIGMLAVQFLLTLIILTV---FLAKAE 191 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + I+ +G L + + + + IR LG+T+ AI E LV G +L GVP Sbjct: 192 YLITTSERLVGT-LSGKRGQNMLELAVRTIRGVALGVTLTAIVESLVGGGGMYLTGVPWA 250 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +T + ++ G ++ I++ + A L + +F+ D LRP+L+ Sbjct: 251 SILTAVTFMACLLQAGPGVTLFPAVIWVYFDKGVMPAIVLLAITFLTIFL-DNMLRPYLI 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P + G++GG+ +GL G+F+GP+++++ + K+ + + +E Sbjct: 310 RKQADVPLVLIMMGVIGGLAALGLAGIFVGPMILSITYTLIKQWMESNQE 359 >gi|160886195|ref|ZP_02067198.1| hypothetical protein BACOVA_04202 [Bacteroides ovatus ATCC 8483] gi|237723005|ref|ZP_04553486.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260173678|ref|ZP_05760090.1| hypothetical protein BacD2_17520 [Bacteroides sp. D2] gi|315921940|ref|ZP_07918180.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108080|gb|EDO09825.1| hypothetical protein BACOVA_04202 [Bacteroides ovatus ATCC 8483] gi|229447527|gb|EEO53318.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|313695815|gb|EFS32650.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 341 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G I ++ +++ MI L+F G +++++ + Sbjct: 119 LGKDTLSFIMSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGG----KKMEAYVNDIL 174 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P ++ ++ +RS +G+ ++AI +G V Y L G P+ + LG +T + Sbjct: 175 PFNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLTCFATI 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ FNA LF +GAI + D +R L L T Sbjct: 235 IPMVGTALVWFPVAAYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 IFGVVIGLPIFGFMGVIFGP 314 >gi|254372555|ref|ZP_04988044.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570282|gb|EDN35936.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 346 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIVLKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTIMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 231 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 279 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 280 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 338 Query: 345 SIMAIKE 351 +M +E Sbjct: 339 KLMNNQE 345 >gi|327398765|ref|YP_004339634.1| hypothetical protein Hipma_0605 [Hippea maritima DSM 10411] gi|327181394|gb|AEA33575.1| protein of unknown function UPF0118 [Hippea maritima DSM 10411] Length = 338 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 7/189 (3%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +F I F+ RD + S+ + Y KI + + I +T LG + A +G+ Sbjct: 153 LFSFIIAFYLIRDADDFLNYISSIIDDKESFY--KILKSIRDSINATVLGGVLTAFIQGI 210 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + + + G+ + + A+ + +P G + + +IYLLI G + WG+ Sbjct: 211 IGAIGFLIVGLNAFFLWMFLIAMFSFVPLVGTAVIWIPAAIYLLISGAYIKGAFILAWGS 270 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + VD RP ++ I + + FFG++G + G +G+ +GPV++++ V+ K + Sbjct: 271 LAIGTVDNYFRPIIISSKINIHSMVLFFGILGSIVVFGPIGIILGPVIISVGDVLVKTYV 330 Query: 347 MAIKENKEK 355 NK K Sbjct: 331 ----SNKAK 335 >gi|194323489|ref|ZP_03057266.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|194322344|gb|EDX19825.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] Length = 341 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 54 RHKSSFIIVIAIL--LCIFI-PLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP- 109 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 110 --YIGSTLQEHFDNLLNMVNQDKDIIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVY 166 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 167 QFLVSSTSLEKFLKKIVLKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTIMTITFSM 225 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 226 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 274 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 275 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 333 Query: 345 SIMAIKE 351 +M +E Sbjct: 334 KLMNNQE 340 >gi|325111313|ref|YP_004272381.1| hypothetical protein Plabr_4788 [Planctomyces brasiliensis DSM 5305] gi|324971581|gb|ADY62359.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 459 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 79/366 (21%), Positives = 151/366 (41%), Gaps = 56/366 (15%) Query: 39 IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 ++ + P+Y+ F+ + + T A +AT +++ I+PL G L++ V+ L Sbjct: 74 VVALIAQPVYNYFLKRTKNRPTVAAGMATGTIVAAVIIPLFIGITVGALQL--FVAAEQL 131 Query: 99 ANQHGIPVPRWLSDIPGG-------MWASELWT------KHLSHPQSLKILSETFLKT-- 143 + V R + + G +W + + + + LK E L+ Sbjct: 132 LDDE--TVQRTIDTVKQGEIYESVIVWGEQFFPIVTAEYQDRYSEEDLKEWREEVLEQRA 189 Query: 144 --------NGIDFIPRFASRFGMIFLD---------YCLSIIFMIIALFFFYRDGFSISQ 186 NG+ + G F + +I ++AL++F+ +G ++ Q Sbjct: 190 ENLRESVQNGLKRLAVITFSAGTAFTTVDILAKTGWTLMGLITFVMALYYFFCEGPNLLQ 249 Query: 187 QLDSL-------GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L LF + I V+ +TFL A+ +G+ A W G Sbjct: 250 HAIDLIPVDVNHQRTLFQEFGTSIR----AVVSATFLA----ALAQGIATSVALWALGFG 301 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++ A+IP G + + ++YL +G+ A L ++G + +D +R Sbjct: 302 HFFLFTIVATFSALIPLAGTWLVWLPCAVYLAYQGSWIWALLLAVYGFGLVGTLDNIIRA 361 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV----LMALIAVIWKESIMAIKENKE 354 +++ KL L F ++GG++ MGL G+FI PV L ALI + +E + + +E Sbjct: 362 YVLHSDAKLHPLLAFVSVLGGLQVMGLWGVFIAPVVASCLYALIRIFNEELVDISRLQRE 421 Query: 355 KISSNF 360 + +NF Sbjct: 422 RPPANF 427 >gi|158521116|ref|YP_001528986.1| hypothetical protein Dole_1102 [Desulfococcus oleovorans Hxd3] gi|158509942|gb|ABW66909.1| protein of unknown function UPF0118 [Desulfococcus oleovorans Hxd3] Length = 365 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 185 SQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 Q+L HL P + + ++ K V RS LG + A+ +G G A+ + G+P Sbjct: 188 QQRLYDYILHLVPMSAEHETVLIQKMKDVSRSAVLGSFLTALAQGAAGGLAFAICGMPGF 247 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G + A ++IP G + + + YLLI G I L +W + + ++D LRP Sbjct: 248 F-WGAVMAFASLIPVVGTALVWVPAAAYLLISGKIGLGVFLIIWCVVVVGMIDNLLRPLF 306 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G + + FF ++GG+ GL+GL GP++ + V+ Sbjct: 307 MRGGAGMSTVVIFFAILGGIHLFGLIGLIYGPLIFGITMVM 347 >gi|208778982|ref|ZP_03246328.1| hypothetical membrane protein [Francisella novicida FTG] gi|208744782|gb|EDZ91080.1| hypothetical membrane protein [Francisella novicida FTG] gi|328676661|gb|AEB27531.1| hypothetical protein FNFX1_0583 [Francisella cf. novicida Fx1] Length = 341 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 54 RHKSSFIIVIAIL--LCIFI-PLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP- 109 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 110 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVY 166 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 167 QFLVSSTSLEKFLKKIVLKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTIMTITFSM 225 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 226 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 274 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 275 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 333 Query: 345 SIMAIKE 351 +M +E Sbjct: 334 KLMNNQE 340 >gi|118497190|ref|YP_898240.1| hypothetical protein FTN_0591 [Francisella tularensis subsp. novicida U112] gi|118423096|gb|ABK89486.1| conserved hypothetical membrane protein [Francisella novicida U112] Length = 346 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDIIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIVLKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTIMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 231 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 279 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 280 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 338 Query: 345 SIMAIKE 351 +M +E Sbjct: 339 KLMNNQE 345 >gi|16760543|ref|NP_456160.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141696|ref|NP_805038.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052909|ref|ZP_03345787.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213612364|ref|ZP_03370190.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646713|ref|ZP_03376766.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825924|ref|ZP_06545083.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25307060|pir||AH0703 probable membrane protein STY1759 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502839|emb|CAD02001.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137324|gb|AAO68887.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 372 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 11/221 (4%) Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ T I F+ + A+ G + L ++F + ++R G ++ + L Sbjct: 145 YIGTTTIWFVGQ-AAHIGRFMMHCALMLLF---SALLYWR-GEQVAMGIRHFACRLAAKR 199 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G Sbjct: 200 GDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPL 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ A+ I+L G+ T L +W A+ + +D +RP L+ LP L G++G Sbjct: 260 PVLIPAI-IWLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIG 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVI---WKESIMAIKENKEKI 356 G+ G++GLFIGPVL+A+ + W + A E+I Sbjct: 318 GLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|213581770|ref|ZP_03363596.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 370 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 11/221 (4%) Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ T I F+ + A+ G + L ++F + ++R G ++ + L Sbjct: 143 YIGTTTIWFVGQ-AAHIGRFMMHCALMLLF---SALLYWR-GEQVAMGIRHFACRLAAKR 197 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G Sbjct: 198 GDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPL 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ A+ I+L G+ T L +W A+ + +D +RP L+ LP L G++G Sbjct: 258 PVLIPAI-IWLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIG 315 Query: 319 GVRTMGLLGLFIGPVLMALIAVI---WKESIMAIKENKEKI 356 G+ G++GLFIGPVL+A+ + W + A E+I Sbjct: 316 GLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 356 >gi|238782558|ref|ZP_04626589.1| hypothetical protein yberc0001_22080 [Yersinia bercovieri ATCC 43970] gi|238716485|gb|EEQ08466.1| hypothetical protein yberc0001_22080 [Yersinia bercovieri ATCC 43970] Length = 367 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 73/357 (20%), Positives = 150/357 (42%), Gaps = 26/357 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +I+ S + ++ F A ++ +WP+ A+I T+ ++ LF+ Sbjct: 21 ILIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKILWGKRWLAALIMTLLLVLLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQSL 133 +P+ L + L+ + +P WL +P G S T ++ Sbjct: 81 IPIALLVSSLVQNSGPLIQWASSPSNLRMPDVTWLQSVPMVGNKLYSSWHTLIAGGGNAI 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQLD 189 + ++ + + A+ G + L ++F ++ F + G I + D Sbjct: 141 IAKVQPYVGAAATWLVAQ-AAHIGYFLIHLALMVLFSVLLYFHGEQVGLGIRHFAVRAAD 199 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 G+ + + K IR+ LG+ + A+ + ++ G +AG+ V+ Sbjct: 200 KRGD--------AVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLMF 251 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I + G + I+L G+ T L +W I + +D LRP+L+ +P Sbjct: 252 ICCVAQLGPLLILVPAIIWLYWTGDTTWGTVLLVWSCI-VGTMDNVLRPYLIRMEADMPM 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIW-------KESIMAIKENKEKI 356 + G++GG+ + G++GLFIGPV++A+ + W +ESI + ++ E++ Sbjct: 311 ILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESITEVAKHLEEL 367 >gi|260597659|ref|YP_003210230.1| putative inner membrane protein [Cronobacter turicensis z3032] gi|260216836|emb|CBA30340.1| UPF0118 inner membrane protein ydiK [Cronobacter turicensis z3032] Length = 375 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 82/364 (22%), Positives = 165/364 (45%), Gaps = 17/364 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ M PQ ++ + + +++++ L+ ++ F A + +WP+ + K Sbjct: 7 LRQPMDVPQILLSVLFLSVMIIACLWIVQPFILGFAWAGTVVIATWPLLLR-LQKMLWGR 65 Query: 60 TFLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 LAV+ V ++ LF++P+ L +++ + + Q IP WL IP Sbjct: 66 RSLAVLVMVLILIMLFVIPVALLVN-SLVDSSGPFIHWLTSGQMTIPDLAWLHSIPYIGD 124 Query: 119 ASELWTKHLSHPQSLKILSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L +L I+++ +L T FI + A+ G + + L ++F + Sbjct: 125 KLYLGWHNLVESGGSAIMAKVRPYLGTTTGWFIGQ-AAHLGRLLMHCGLMLLFSAL---- 179 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 Y G ++ + L + + IR+ LG+ + A+ +G++ G ++ Sbjct: 180 LYWRGEQVALGIRHFAIRLASKRGDAAVVLAGQAIRAVALGVVVTALVQGVLGGIGLAIS 239 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P L V+ + ++ G P+ A+ I+L G+ T L +W A+ + +D Sbjct: 240 GIPYATLLTVVMILSCLVQLGPLPVLVPAI-IWLYWSGDATWGTVLLVWSAV-VGTLDNI 297 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKEN 352 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ + +W +EN Sbjct: 298 IRPMLIRMGADLPMVLILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSVWVSEAPLPEEN 357 Query: 353 KEKI 356 + + Sbjct: 358 SKTV 361 >gi|168233553|ref|ZP_02658611.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472682|ref|ZP_03078666.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238910820|ref|ZP_04654657.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194459046|gb|EDX47885.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332357|gb|EDZ19121.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 372 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 6/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W AI + +D +RP L+ LP L G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAI-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVI---WKESIMAIKENKEKI 356 LFIGPVL+A+ + W + A E+I Sbjct: 327 LFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|218558557|ref|YP_002391470.1| inner membrane protein [Escherichia coli S88] gi|218365326|emb|CAR03047.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] Length = 370 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGNMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|222874438|gb|EEF11569.1| predicted protein [Populus trichocarpa] Length = 143 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 2/109 (1%) Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P GA + + V+IY L G + L +G + + +VD LRP LVG K+ Sbjct: 2 AFLSLLPAVGAGLIWAPVAIYFLATGAVGKGVILIAYGVLVIGLVDNVLRPLLVGKDTKM 61 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEK 355 P +GG+ GL G IGPV+ AL IW S M +++ +++ Sbjct: 62 PDYIVLISTLGGMALFGLTGFVIGPVIAALFMAIWDMFSRMQVQDEEKR 110 >gi|26247938|ref|NP_753978.1| putative inner membrane protein [Escherichia coli CFT073] gi|110641809|ref|YP_669539.1| putative inner membrane protein [Escherichia coli 536] gi|191171652|ref|ZP_03033199.1| inner membrane protein YdiK [Escherichia coli F11] gi|218689630|ref|YP_002397842.1| putative inner membrane protein [Escherichia coli ED1a] gi|218699747|ref|YP_002407376.1| putative inner membrane protein [Escherichia coli IAI39] gi|227885892|ref|ZP_04003697.1| inner membrane protein [Escherichia coli 83972] gi|300938988|ref|ZP_07153686.1| hypothetical protein HMPREF9530_03822 [Escherichia coli MS 21-1] gi|300987762|ref|ZP_07178340.1| hypothetical protein HMPREF9553_03359 [Escherichia coli MS 200-1] gi|300994853|ref|ZP_07180966.1| hypothetical protein HMPREF9531_05248 [Escherichia coli MS 45-1] gi|301050981|ref|ZP_07197827.1| hypothetical protein HMPREF9549_04881 [Escherichia coli MS 185-1] gi|331673244|ref|ZP_08374012.1| putative permease [Escherichia coli TA280] gi|26108341|gb|AAN80543.1|AE016761_118 Hypothetical protein ydiK [Escherichia coli CFT073] gi|110343401|gb|ABG69638.1| hypothetical protein YdiK [Escherichia coli 536] gi|190907982|gb|EDV67574.1| inner membrane protein YdiK [Escherichia coli F11] gi|218369733|emb|CAR17504.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|218427194|emb|CAR08080.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|227837465|gb|EEJ47931.1| inner membrane protein [Escherichia coli 83972] gi|281178758|dbj|BAI55088.1| putative transport protein [Escherichia coli SE15] gi|284921609|emb|CBG34681.1| putative membrane protein [Escherichia coli 042] gi|300297358|gb|EFJ53743.1| hypothetical protein HMPREF9549_04881 [Escherichia coli MS 185-1] gi|300306050|gb|EFJ60570.1| hypothetical protein HMPREF9553_03359 [Escherichia coli MS 200-1] gi|300406193|gb|EFJ89731.1| hypothetical protein HMPREF9531_05248 [Escherichia coli MS 45-1] gi|300456091|gb|EFK19584.1| hypothetical protein HMPREF9530_03822 [Escherichia coli MS 21-1] gi|307553709|gb|ADN46484.1| predicted inner membrane protein YdiK [Escherichia coli ABU 83972] gi|315290535|gb|EFU49909.1| hypothetical protein HMPREF9544_05061 [Escherichia coli MS 153-1] gi|320195417|gb|EFW70042.1| Putative membrane protein [Escherichia coli WV_060327] gi|324007042|gb|EGB76261.1| hypothetical protein HMPREF9532_03276 [Escherichia coli MS 57-2] gi|324011447|gb|EGB80666.1| hypothetical protein HMPREF9533_04541 [Escherichia coli MS 60-1] gi|331069442|gb|EGI40829.1| putative permease [Escherichia coli TA280] Length = 370 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|289807066|ref|ZP_06537695.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 355 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 11/221 (4%) Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ T I F+ + A+ G + L ++F + Y G ++ + L Sbjct: 132 YIGTTTIWFVGQ-AAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFACRLAAKR 186 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G Sbjct: 187 GDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPL 246 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ A+ I+L G+ T L +W A+ + +D +RP L+ LP L G++G Sbjct: 247 PVLIPAI-IWLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIG 304 Query: 319 GVRTMGLLGLFIGPVLMALIAVI---WKESIMAIKENKEKI 356 G+ G++GLFIGPVL+A+ + W + A E+I Sbjct: 305 GLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 345 >gi|168240872|ref|ZP_02665804.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339094|gb|EDZ25858.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 395 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W A+ + +D +RP L+ LP L G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVI---WKESIMAIKENKEKI 356 LFIGPVL+A+ + W + A E+I Sbjct: 327 LFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|194434783|ref|ZP_03067033.1| inner membrane protein YdiK [Shigella dysenteriae 1012] gi|194416952|gb|EDX33071.1| inner membrane protein YdiK [Shigella dysenteriae 1012] gi|332093944|gb|EGI98997.1| hypothetical protein SD15574_1835 [Shigella dysenteriae 155-74] Length = 370 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|320175148|gb|EFW50259.1| putative membrane protein [Shigella dysenteriae CDC 74-1112] Length = 370 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|118616069|ref|YP_904401.1| hypothetical protein MUL_0177 [Mycobacterium ulcerans Agy99] gi|118568179|gb|ABL02930.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length = 385 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 29/333 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L YFL+ +F ++ A + + P+++ F K ++ A + ++ + + IVP+ Sbjct: 21 LLFGAYFLRSYFVLIVVAAVGAYLFTPLFNWF--NKRLNAGLSATLTLLTALVVVIVPVG 78 Query: 80 FLFYYGMLEMKELVSKVV----------LANQHGIPVPRWLSDIP---GGMWASELWTKH 126 L ++++ +V + L ++ V L+ +P + A L Sbjct: 79 LLVGLAVVQIARMVENIAGWVKTTDLSSLGDKALQLVNELLARVPFLHVTVTAEALRQMM 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S Q++ + FL+ S G+IFL ++ +AL ++ Sbjct: 139 ISVAQNVGLWLLHFLQNAAGSLAGAVTS--GIIFL-------YVFMALLLNCEKLRTLIG 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL-G 245 QL+ LGE + Y +K+ +V R T +G +IA+ +G+ ++ ++AG + Sbjct: 190 QLNPLGEEVTDLYLRKMGSMV----RGTVIGQFVIALCQGVAGAASIYVAGFHHGFFIFA 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ M++IP G I I + GNI + LW + + +D LRP LV Sbjct: 246 IVLTAMSIIPLGGGIVTIPFGIGMAFYGNIGGGAFVVLWHLLVVTNIDNFLRPVLVPRDA 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +L G+ G G+ IGPVLM LI Sbjct: 306 RLNSALMLTSAFAGIGMFGPWGIIIGPVLMILI 338 >gi|258542555|ref|YP_003187988.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633633|dbj|BAH99608.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636692|dbj|BAI02661.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639745|dbj|BAI05707.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256642801|dbj|BAI08756.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256645856|dbj|BAI11804.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256648909|dbj|BAI14850.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256651896|dbj|BAI17830.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654953|dbj|BAI20880.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 360 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 115/231 (49%), Gaps = 6/231 (2%) Query: 123 WTKHLSHPQSLKILSETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +HL + + + I+ + + + I ++ +A GM+ + + L+ +II F + Sbjct: 135 WWQHLQNMKPMDIVQQAVPQPDQIMHYLMSYAGSIGMLAVQFLLT---LIILAAFLAKAE 191 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + I+ +G L +++ + + IR LG+T+ AI E LV G +L GVP Sbjct: 192 YLITTSEKLVGT-LSGKRGQEMLELAVRTIRGVALGVTLTAIVESLVGGGGMYLTGVPWA 250 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +T + ++ G I+ I++ + A L + +F+ D LRP+L+ Sbjct: 251 SILTAVTFMACLLQAGPGITLFPAVIWVYFDKGMVPAIVLLAITFLTIFL-DNMLRPYLI 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P + G++GG+ +GL G+F+GP+++++ + K+ + + +E+ Sbjct: 310 RKQADVPLVLIMMGVIGGLAALGLAGIFVGPMILSITYTLIKQWMESNQES 360 >gi|16129644|ref|NP_416203.1| inner membrane protein, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|24113077|ref|NP_707587.1| putative inner membrane protein [Shigella flexneri 2a str. 301] gi|30063202|ref|NP_837373.1| putative inner membrane protein [Shigella flexneri 2a str. 2457T] gi|82543942|ref|YP_407889.1| inner membrane protein [Shigella boydii Sb227] gi|82776939|ref|YP_403288.1| putative inner membrane protein [Shigella dysenteriae Sd197] gi|89108528|ref|AP_002308.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|91210901|ref|YP_540887.1| putative inner membrane protein [Escherichia coli UTI89] gi|110805665|ref|YP_689185.1| putative inner membrane protein [Shigella flexneri 5 str. 8401] gi|117623867|ref|YP_852780.1| putative inner membrane protein [Escherichia coli APEC O1] gi|157157163|ref|YP_001462982.1| putative inner membrane protein [Escherichia coli E24377A] gi|157161153|ref|YP_001458471.1| putative inner membrane protein [Escherichia coli HS] gi|170019962|ref|YP_001724916.1| putative inner membrane protein [Escherichia coli ATCC 8739] gi|170081348|ref|YP_001730668.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187732656|ref|YP_001880447.1| putative inner membrane protein [Shigella boydii CDC 3083-94] gi|188492403|ref|ZP_02999673.1| putative membrane protein [Escherichia coli 53638] gi|191167867|ref|ZP_03029672.1| inner membrane protein YdiK [Escherichia coli B7A] gi|193065271|ref|ZP_03046343.1| inner membrane protein YdiK [Escherichia coli E22] gi|193068945|ref|ZP_03049904.1| inner membrane protein YdiK [Escherichia coli E110019] gi|194429510|ref|ZP_03062032.1| inner membrane protein YdiK [Escherichia coli B171] gi|194438554|ref|ZP_03070643.1| inner membrane protein YdiK [Escherichia coli 101-1] gi|209919002|ref|YP_002293086.1| putative inner membrane protein [Escherichia coli SE11] gi|218554254|ref|YP_002387167.1| hypothetical protein ECIAI1_1740 [Escherichia coli IAI1] gi|218695249|ref|YP_002402916.1| putative inner membrane protein [Escherichia coli 55989] gi|237705634|ref|ZP_04536115.1| inner membrane protein YdiK [Escherichia sp. 3_2_53FAA] gi|238900903|ref|YP_002926699.1| putative inner membrane protein [Escherichia coli BW2952] gi|253773356|ref|YP_003036187.1| inner membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161749|ref|YP_003044857.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|256018118|ref|ZP_05431983.1| putative inner membrane protein [Shigella sp. D9] gi|256022649|ref|ZP_05436514.1| putative inner membrane protein [Escherichia sp. 4_1_40B] gi|260843994|ref|YP_003221772.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260855512|ref|YP_003229403.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|293415004|ref|ZP_06657647.1| inner membrane protein [Escherichia coli B185] gi|293446062|ref|ZP_06662484.1| inner membrane protein [Escherichia coli B088] gi|300818325|ref|ZP_07098535.1| hypothetical protein HMPREF9345_03403 [Escherichia coli MS 107-1] gi|300821439|ref|ZP_07101586.1| hypothetical protein HMPREF9346_01266 [Escherichia coli MS 119-7] gi|300904539|ref|ZP_07122378.1| hypothetical protein HMPREF9536_02615 [Escherichia coli MS 84-1] gi|300918058|ref|ZP_07134679.1| hypothetical protein HMPREF9540_01865 [Escherichia coli MS 115-1] gi|300924723|ref|ZP_07140669.1| hypothetical protein HMPREF9548_02850 [Escherichia coli MS 182-1] gi|300930842|ref|ZP_07146212.1| hypothetical protein HMPREF9550_03100 [Escherichia coli MS 187-1] gi|300951280|ref|ZP_07165129.1| hypothetical protein HMPREF9541_04601 [Escherichia coli MS 116-1] gi|300958569|ref|ZP_07170699.1| hypothetical protein HMPREF9547_04277 [Escherichia coli MS 175-1] gi|301027867|ref|ZP_07191168.1| hypothetical protein HMPREF9551_03793 [Escherichia coli MS 196-1] gi|301303203|ref|ZP_07209329.1| hypothetical protein HMPREF9347_01794 [Escherichia coli MS 124-1] gi|301326548|ref|ZP_07219889.1| hypothetical protein HMPREF9535_01500 [Escherichia coli MS 78-1] gi|301647871|ref|ZP_07247653.1| hypothetical protein HMPREF9543_04379 [Escherichia coli MS 146-1] gi|306815059|ref|ZP_07449215.1| putative inner membrane protein [Escherichia coli NC101] gi|307138347|ref|ZP_07497703.1| putative inner membrane protein [Escherichia coli H736] gi|307310741|ref|ZP_07590387.1| protein of unknown function UPF0118 [Escherichia coli W] gi|309788635|ref|ZP_07683235.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309793455|ref|ZP_07687882.1| hypothetical protein HMPREF9348_00614 [Escherichia coli MS 145-7] gi|331642286|ref|ZP_08343421.1| putative permease [Escherichia coli H736] gi|331647179|ref|ZP_08348273.1| putative permease [Escherichia coli M605] gi|331653088|ref|ZP_08354093.1| putative permease [Escherichia coli M718] gi|331657665|ref|ZP_08358627.1| putative permease [Escherichia coli TA206] gi|331668373|ref|ZP_08369221.1| putative permease [Escherichia coli TA271] gi|331683195|ref|ZP_08383796.1| putative permease [Escherichia coli H299] gi|84027918|sp|P0AFS7|YDIK_ECOLI RecName: Full=UPF0118 inner membrane protein ydiK gi|84027919|sp|P0AFS8|YDIK_SHIFL RecName: Full=UPF0118 inner membrane protein ydiK gi|1742759|dbj|BAA15450.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|1787979|gb|AAC74758.1| inner membrane protein, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|24052052|gb|AAN43294.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30041454|gb|AAP17182.1| hypothetical protein S1850 [Shigella flexneri 2a str. 2457T] gi|81241087|gb|ABB61797.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|81245353|gb|ABB66061.1| conserved hypothetical protein [Shigella boydii Sb227] gi|91072475|gb|ABE07356.1| putative purine regulated protein YdiK [Escherichia coli UTI89] gi|110615213|gb|ABF03880.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115512991|gb|ABJ01066.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157066833|gb|ABV06088.1| inner membrane protein YdiK [Escherichia coli HS] gi|157079193|gb|ABV18901.1| inner membrane protein YdiK [Escherichia coli E24377A] gi|169754890|gb|ACA77589.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|169889183|gb|ACB02890.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187429648|gb|ACD08922.1| inner membrane protein YdiK [Shigella boydii CDC 3083-94] gi|188487602|gb|EDU62705.1| putative membrane protein [Escherichia coli 53638] gi|190902126|gb|EDV61870.1| inner membrane protein YdiK [Escherichia coli B7A] gi|192927065|gb|EDV81687.1| inner membrane protein YdiK [Escherichia coli E22] gi|192957740|gb|EDV88184.1| inner membrane protein YdiK [Escherichia coli E110019] gi|194412474|gb|EDX28774.1| inner membrane protein YdiK [Escherichia coli B171] gi|194422564|gb|EDX38562.1| inner membrane protein YdiK [Escherichia coli 101-1] gi|209912261|dbj|BAG77335.1| putative transport protein [Escherichia coli SE11] gi|218351981|emb|CAU97713.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218361022|emb|CAQ98597.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|222033444|emb|CAP76185.1| UPF0118 inner membrane protein ydiK [Escherichia coli LF82] gi|226900391|gb|EEH86650.1| inner membrane protein YdiK [Escherichia sp. 3_2_53FAA] gi|238862554|gb|ACR64552.1| predicted inner membrane protein [Escherichia coli BW2952] gi|253324400|gb|ACT29002.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973650|gb|ACT39321.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253977844|gb|ACT43514.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|257754161|dbj|BAI25663.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257759141|dbj|BAI30638.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260449189|gb|ACX39611.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|281601125|gb|ADA74109.1| inner membrane protein ydiK [Shigella flexneri 2002017] gi|291322892|gb|EFE62320.1| inner membrane protein [Escherichia coli B088] gi|291432652|gb|EFF05631.1| inner membrane protein [Escherichia coli B185] gi|294492598|gb|ADE91354.1| inner membrane protein YdiK [Escherichia coli IHE3034] gi|299879023|gb|EFI87234.1| hypothetical protein HMPREF9551_03793 [Escherichia coli MS 196-1] gi|300314778|gb|EFJ64562.1| hypothetical protein HMPREF9547_04277 [Escherichia coli MS 175-1] gi|300403533|gb|EFJ87071.1| hypothetical protein HMPREF9536_02615 [Escherichia coli MS 84-1] gi|300414749|gb|EFJ98059.1| hypothetical protein HMPREF9540_01865 [Escherichia coli MS 115-1] gi|300419101|gb|EFK02412.1| hypothetical protein HMPREF9548_02850 [Escherichia coli MS 182-1] gi|300449461|gb|EFK13081.1| hypothetical protein HMPREF9541_04601 [Escherichia coli MS 116-1] gi|300461317|gb|EFK24810.1| hypothetical protein HMPREF9550_03100 [Escherichia coli MS 187-1] gi|300525942|gb|EFK47011.1| hypothetical protein HMPREF9346_01266 [Escherichia coli MS 119-7] gi|300528965|gb|EFK50027.1| hypothetical protein HMPREF9345_03403 [Escherichia coli MS 107-1] gi|300841612|gb|EFK69372.1| hypothetical protein HMPREF9347_01794 [Escherichia coli MS 124-1] gi|300846768|gb|EFK74528.1| hypothetical protein HMPREF9535_01500 [Escherichia coli MS 78-1] gi|301074012|gb|EFK88818.1| hypothetical protein HMPREF9543_04379 [Escherichia coli MS 146-1] gi|305851707|gb|EFM52160.1| putative inner membrane protein [Escherichia coli NC101] gi|306908919|gb|EFN39415.1| protein of unknown function UPF0118 [Escherichia coli W] gi|308123042|gb|EFO60304.1| hypothetical protein HMPREF9348_00614 [Escherichia coli MS 145-7] gi|308923457|gb|EFP68964.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309701913|emb|CBJ01225.1| putative membrane protein [Escherichia coli ETEC H10407] gi|312946288|gb|ADR27115.1| putative inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|313648970|gb|EFS13407.1| hypothetical protein SF2457T_2635 [Shigella flexneri 2a str. 2457T] gi|313848654|emb|CAQ32163.2| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|315060993|gb|ADT75320.1| predicted inner membrane protein [Escherichia coli W] gi|315136329|dbj|BAJ43488.1| putative inner membrane protein [Escherichia coli DH1] gi|315257509|gb|EFU37477.1| putative membrane protein [Escherichia coli MS 85-1] gi|315286386|gb|EFU45822.1| hypothetical protein HMPREF9539_03668 [Escherichia coli MS 110-3] gi|315299716|gb|EFU58956.1| hypothetical protein HMPREF9545_01227 [Escherichia coli MS 16-3] gi|315618883|gb|EFU99466.1| conserved hypothetical protein [Escherichia coli 3431] gi|320181288|gb|EFW56207.1| Putative membrane protein [Shigella boydii ATCC 9905] gi|320184437|gb|EFW59245.1| Putative membrane protein [Shigella flexneri CDC 796-83] gi|320197870|gb|EFW72478.1| Putative membrane protein [Escherichia coli EC4100B] gi|323153078|gb|EFZ39347.1| hypothetical protein ECEPECA14_5161 [Escherichia coli EPECa14] gi|323163462|gb|EFZ49288.1| hypothetical protein ECE128010_0313 [Escherichia coli E128010] gi|323170001|gb|EFZ55657.1| hypothetical protein ECLT68_5645 [Escherichia coli LT-68] gi|323186039|gb|EFZ71395.1| hypothetical protein ECOK1357_0501 [Escherichia coli 1357] gi|323378435|gb|ADX50703.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323937291|gb|EGB33570.1| ydiK protein [Escherichia coli E1520] gi|323940645|gb|EGB36836.1| ydiK protein [Escherichia coli E482] gi|323948016|gb|EGB44008.1| ydiK protein [Escherichia coli H120] gi|323952195|gb|EGB48068.1| ydiK protein [Escherichia coli H252] gi|323973932|gb|EGB69104.1| ydiK protein [Escherichia coli TA007] gi|324016518|gb|EGB85737.1| hypothetical protein HMPREF9542_04862 [Escherichia coli MS 117-3] gi|324119172|gb|EGC13060.1| ydiK protein [Escherichia coli E1167] gi|330911495|gb|EGH40005.1| putative membrane protein [Escherichia coli AA86] gi|331039084|gb|EGI11304.1| putative permease [Escherichia coli H736] gi|331043962|gb|EGI16098.1| putative permease [Escherichia coli M605] gi|331049186|gb|EGI21258.1| putative permease [Escherichia coli M718] gi|331055913|gb|EGI27922.1| putative permease [Escherichia coli TA206] gi|331063567|gb|EGI35478.1| putative permease [Escherichia coli TA271] gi|331079410|gb|EGI50607.1| putative permease [Escherichia coli H299] gi|332090828|gb|EGI95920.1| hypothetical protein SB521682_1834 [Shigella boydii 5216-82] gi|332096073|gb|EGJ01078.1| hypothetical protein SB359474_1615 [Shigella boydii 3594-74] gi|332101515|gb|EGJ04861.1| inner membrane protein YdiK [Shigella sp. D9] Length = 370 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|183984335|ref|YP_001852626.1| hypothetical protein MMAR_4364 [Mycobacterium marinum M] gi|183177661|gb|ACC42771.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length = 385 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 29/333 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L YFL+ +F ++ A + + P+++ F K ++ A + ++ + + IVP+ Sbjct: 21 LLFGAYFLRSYFVLIVVAAVGAYLFTPLFNWF--NKRLNAGLSATLTLLTALVVVIVPVG 78 Query: 80 FLFYYGMLEMKELVSKVV----------LANQHGIPVPRWLSDIP---GGMWASELWTKH 126 L ++++ +V + L ++ V L+ +P + A L Sbjct: 79 LLVGLAVVQIARMVENIAGWVKTTDLSSLGDKALQLVNELLARVPFLHVTVTAEALRKMM 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S Q++ FL+ S G+IFL ++ +AL ++ Sbjct: 139 ISVAQNVGQWLLHFLQNAAGSLAGAVTS--GIIFL-------YVFMALLLNREKLRTLIG 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL-G 245 QL+ LGE + Y +K+ +V R T +G +IA+ +G+ ++ ++AG + Sbjct: 190 QLNPLGEEVTDLYLRKMGSMV----RGTVIGQFVIALCQGVAGAASIYVAGFHHGFFIFA 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ M++IP G I I + GNI + LW + + +D LRP LV Sbjct: 246 ILLTAMSIIPLGGGIVTIPFGIGMAFYGNIGGGAFVVLWHLLVVTNIDNFLRPILVPRDA 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +L + G+ G G+ IGPVLM LI Sbjct: 306 RLNSALMLMSVFAGIGMFGPWGIIIGPVLMILI 338 >gi|134302427|ref|YP_001122397.1| hypothetical protein FTW_1565 [Francisella tularensis subsp. tularensis WY96-3418] gi|134050204|gb|ABO47275.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 341 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 54 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 109 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 110 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 166 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 167 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTMMTITFSM 225 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 226 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 274 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 275 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 333 Query: 345 SIMAIKE 351 +M +E Sbjct: 334 KLMNNQE 340 >gi|213428578|ref|ZP_03361328.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 333 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 11/205 (5%) Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ T I F+ + A+ G + L ++F + ++R G ++ + L Sbjct: 106 YIGTTTIWFVGQ-AAHIGRFMMHCALMLLF---SALLYWR-GEQVAMGIRHFACRLAAKR 160 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G Sbjct: 161 GDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPL 220 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ A+ I+L G+ T L +W A+ + +D +RP L+ LP L G++G Sbjct: 221 PVLIPAI-IWLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIG 278 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G++GLFIGPVL+ AV W+ Sbjct: 279 GLIAFGMIGLFIGPVLL---AVTWR 300 >gi|15802100|ref|NP_288122.1| putative inner membrane protein [Escherichia coli O157:H7 EDL933] gi|15831649|ref|NP_310422.1| inner membrane protein [Escherichia coli O157:H7 str. Sakai] gi|168751901|ref|ZP_02776923.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4113] gi|168756686|ref|ZP_02781693.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4401] gi|168762251|ref|ZP_02787258.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4501] gi|168770447|ref|ZP_02795454.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4486] gi|168775015|ref|ZP_02800022.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4196] gi|168782100|ref|ZP_02807107.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4076] gi|168789822|ref|ZP_02814829.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC869] gi|168800134|ref|ZP_02825141.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC508] gi|195937372|ref|ZP_03082754.1| putative inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208810488|ref|ZP_03252364.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4206] gi|208816562|ref|ZP_03257682.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4045] gi|208820705|ref|ZP_03261025.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4042] gi|209397418|ref|YP_002270757.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4115] gi|217328985|ref|ZP_03445066.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. TW14588] gi|254793305|ref|YP_003078142.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261227867|ref|ZP_05942148.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258399|ref|ZP_05950932.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291282818|ref|YP_003499636.1| Inner membrane protein YdiK [Escherichia coli O55:H7 str. CB9615] gi|12515693|gb|AAG56675.1|AE005392_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13361862|dbj|BAB35818.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187769380|gb|EDU33224.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4196] gi|188014138|gb|EDU52260.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4113] gi|189000250|gb|EDU69236.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4076] gi|189356127|gb|EDU74546.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4401] gi|189360631|gb|EDU79050.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4486] gi|189367449|gb|EDU85865.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4501] gi|189370582|gb|EDU88998.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC869] gi|189377566|gb|EDU95982.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC508] gi|208725004|gb|EDZ74711.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4206] gi|208730905|gb|EDZ79594.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4045] gi|208740828|gb|EDZ88510.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4042] gi|209158818|gb|ACI36251.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4115] gi|209769108|gb|ACI82866.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769110|gb|ACI82867.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769112|gb|ACI82868.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769114|gb|ACI82869.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769116|gb|ACI82870.1| hypothetical protein ECs2395 [Escherichia coli] gi|217318332|gb|EEC26759.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. TW14588] gi|254592705|gb|ACT72066.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|290762691|gb|ADD56652.1| Inner membrane protein YdiK [Escherichia coli O55:H7 str. CB9615] gi|320188374|gb|EFW63036.1| Putative membrane protein [Escherichia coli O157:H7 str. EC1212] gi|320641903|gb|EFX11271.1| putative inner membrane protein [Escherichia coli O157:H7 str. G5101] gi|320647359|gb|EFX16167.1| putative inner membrane protein [Escherichia coli O157:H- str. 493-89] gi|320652653|gb|EFX20922.1| putative inner membrane protein [Escherichia coli O157:H- str. H 2687] gi|320653038|gb|EFX21234.1| putative inner membrane protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658722|gb|EFX26399.1| putative inner membrane protein [Escherichia coli O55:H7 str. USDA 5905] gi|320668712|gb|EFX35517.1| putative inner membrane protein [Escherichia coli O157:H7 str. LSU-61] gi|326342053|gb|EGD65834.1| Putative membrane protein [Escherichia coli O157:H7 str. 1044] gi|326343605|gb|EGD67367.1| Putative membrane protein [Escherichia coli O157:H7 str. 1125] Length = 370 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|187932032|ref|YP_001892017.1| hypothetical protein FTM_1403 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712941|gb|ACD31238.1| conserved hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 346 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 136/307 (44%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTMMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G+PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 231 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 279 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 280 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 338 Query: 345 SIMAIKE 351 +M +E Sbjct: 339 KLMNNQE 345 >gi|16764714|ref|NP_460329.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167551672|ref|ZP_02345426.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994384|ref|ZP_02575476.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168263810|ref|ZP_02685783.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463230|ref|ZP_02697161.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443331|ref|YP_002040620.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447864|ref|YP_002045370.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194734868|ref|YP_002114380.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197265600|ref|ZP_03165674.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241856|ref|YP_002215762.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389294|ref|ZP_03215905.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857130|ref|YP_002243781.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584124|ref|YP_002637922.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16419883|gb|AAL20288.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194401994|gb|ACF62216.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406168|gb|ACF66387.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710370|gb|ACF89591.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634155|gb|EDX52507.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243855|gb|EDY26475.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936372|gb|ACH73705.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601739|gb|EDZ00285.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323653|gb|EDZ11492.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327740|gb|EDZ14504.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205347570|gb|EDZ34201.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708933|emb|CAR33263.1| lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468651|gb|ACN46481.1| hypothetical protein SPC_2365 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246572|emb|CBG24382.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993250|gb|ACY88135.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157899|emb|CBW17394.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912349|dbj|BAJ36323.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223992|gb|EFX49055.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616748|gb|EFY13657.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619992|gb|EFY16865.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622303|gb|EFY19148.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627826|gb|EFY24616.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633075|gb|EFY29818.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636679|gb|EFY33382.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641296|gb|EFY37937.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647390|gb|EFY43882.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650226|gb|EFY46640.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655800|gb|EFY52102.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660126|gb|EFY56365.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665308|gb|EFY61496.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669565|gb|EFY65713.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673491|gb|EFY69593.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677419|gb|EFY73483.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679918|gb|EFY75957.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687390|gb|EFY83362.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129634|gb|ADX17064.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192507|gb|EFZ77737.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198638|gb|EFZ83739.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203119|gb|EFZ88150.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208684|gb|EFZ93622.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213802|gb|EFZ98580.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217661|gb|EGA02376.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219072|gb|EGA03577.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227199|gb|EGA11372.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229463|gb|EGA13586.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232686|gb|EGA16782.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240276|gb|EGA24320.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242736|gb|EGA26757.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245947|gb|EGA29935.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252809|gb|EGA36646.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256701|gb|EGA40430.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267143|gb|EGA50628.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271533|gb|EGA54954.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623509|gb|EGE29854.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 372 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W A+ + +D +RP L+ LP L G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVI---WKESIMAIKENKEKI 356 LFIGPVL+A+ + W + A E+I Sbjct: 327 LFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|62179954|ref|YP_216371.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127587|gb|AAX65290.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714421|gb|EFZ05992.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 372 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W A+ + +D +RP L+ LP L G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVI---WKESIMAIKENKEKI 356 LFIGPVL+A+ + W + A E+I Sbjct: 327 LFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|312966841|ref|ZP_07781059.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312288305|gb|EFR16207.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 370 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 147/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLKTIP--VIGTKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|204927467|ref|ZP_03218668.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322809|gb|EDZ08005.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 372 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 6/136 (4%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W A+ + +D +RP L+ LP L G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVIWK 343 LFIGPVL+ AV W+ Sbjct: 327 LFIGPVLL---AVTWR 339 >gi|94986915|ref|YP_594848.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731164|emb|CAJ54526.1| predicted permease [Lawsonia intracellularis PHE/MN1-00] Length = 346 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 1/153 (0%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + I +G+ +++I +G + G + +A VP G+ITA +A IP G + + V Sbjct: 194 IRNAIFGVLVGIVLVSIIQGFLCGIGFAVANVPQPAFWGLITAFVAPIPFVGTSLVWIPV 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I+L ++G + +W I + VD LRPF + I + ++ G+ G Sbjct: 254 CIWLWLQGETVAMVAMIIWCVIVVAGVDNLLRPFFLKTGIDATLIALILSILCGLAAFGP 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+ GP+L+A+ KES+ A++ + Sbjct: 314 VGIVAGPILVAIAIQASKESLQALQITDRSCNK 346 >gi|293410002|ref|ZP_06653578.1| inner membrane protein [Escherichia coli B354] gi|291470470|gb|EFF12954.1| inner membrane protein [Escherichia coli B354] Length = 370 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 147/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G + Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVGQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|215486863|ref|YP_002329294.1| putative inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|215264935|emb|CAS09321.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 370 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 147/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLKTIP--VIGTKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|271500197|ref|YP_003333222.1| hypothetical protein Dd586_1651 [Dickeya dadantii Ech586] gi|270343752|gb|ACZ76517.1| protein of unknown function UPF0118 [Dickeya dadantii Ech586] Length = 366 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 10/298 (3%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 +WP+ + ++ T+ ++ LF+ P L + L++ V + Sbjct: 48 ATWPLLIRLQQILWGYRSLAVIVMTILLVLLFVFPTSILVSSVIDNASNLINWVSAQGRM 107 Query: 103 GIPVPRWLSDIP---GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 P WL IP + +S H P + + +T ++ A+ G Sbjct: 108 TPPSLDWLQSIPLVGAKLHSSWHALAHSGGPALMAKIQPYIGQTA--SWVVSQAAHVGRF 165 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + L ++F ++ Y G ++ + L + + IR+ LG+ Sbjct: 166 LMHCALMVLFSVL----LYSKGDQVALGVRRFAIRLGGQGGDSAVILAAQAIRAVALGVV 221 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + AI + ++ G LAG+P L V+ + + G I+L G+ T Sbjct: 222 VTAIVQSVLGGIGLALAGIPYTTLLTVLMFLSCVAQIGPLTVLVPAIIWLYWSGDTTWGT 281 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +W + + +D +RP L+ LP L G++GG+ G++GLFIGPV++A+ Sbjct: 282 VLLVWSCV-VGTLDNIIRPLLIRMGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAV 338 >gi|156934268|ref|YP_001438184.1| putative inner membrane protein [Cronobacter sakazakii ATCC BAA-894] gi|156532522|gb|ABU77348.1| hypothetical protein ESA_02098 [Cronobacter sakazakii ATCC BAA-894] Length = 375 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 78/342 (22%), Positives = 158/342 (46%), Gaps = 14/342 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ M PQ ++ + + +++++ L+ ++ F A + +WP+ + K Sbjct: 7 LRQPMDVPQILLSVLFLSVMIIACLWIVQPFILGFAWAGTVVIATWPLLLR-LQKMLWGR 65 Query: 60 TFLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 LAV+ V ++ LF++P+ L +++ + + + IP WL+ IP Sbjct: 66 RSLAVLVMVLILIMLFVIPVALLVN-SLVDSSGPFIHWLTSGKMTIPDLAWLNSIPYIGN 124 Query: 119 ASELWTKHLSHPQSLKILSET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L +L I+++ +L T FI + A+ G + + L ++F + Sbjct: 125 KLYLGWHNLVESGGSAIMAKVRPYLGTTTGWFIGQ-AAHLGRLLMHCGLMLLFSAL---- 179 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 Y G ++ + L + + IR+ LG+ + A+ +G++ G ++ Sbjct: 180 LYWRGEQVAYGIRHFAIRLASKRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAIS 239 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P L V+ + ++ G P+ A+ I+L G+ T L +W A+ + +D Sbjct: 240 GIPYATLLTVVMILSCLVQLGPLPVLVPAI-IWLYWSGDATWGTVLLIWSAV-VGTLDNI 297 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ Sbjct: 298 IRPMLIRMGADLPMVLILSGVIGGLIAFGMIGLFIGPVLLAV 339 >gi|78186116|ref|YP_374159.1| hypothetical protein Plut_0228 [Chlorobium luteolum DSM 273] gi|78166018|gb|ABB23116.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 356 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 168 IFMII--ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIA 222 +FMI +FFF RDG + +++ + P R++ K V R+T G I+ Sbjct: 160 LFMIFLYTMFFFLRDGKPLLERV----LYYLPMSDADQQRLLDKFLSVTRATIKGTMIVG 215 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 + +G + G A L G+ S + G I +++++P G PI + I L G A + Sbjct: 216 VVQGGLAGMALHLGGIESALFWGTIMTVLSVVPVLGPPIIWVPAVISLAASGRFPQAIGV 275 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ AI + +D LRP LVG +L L FFG +GG+ GL G IGP++ AL + Sbjct: 276 ALFCAIVVGQIDNILRPILVGRDTRLHELFIFFGTLGGIGLFGLFGFIIGPIIAALFMTV 335 Query: 342 WKESIMAIKENKEKISSN 359 W+ A ++ I + Sbjct: 336 WEMYGEAFSDSLRDIKTR 353 >gi|170680839|ref|YP_001743566.1| putative inner membrane protein [Escherichia coli SMS-3-5] gi|170518557|gb|ACB16735.1| inner membrane protein YdiK [Escherichia coli SMS-3-5] Length = 370 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKFMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|323978175|gb|EGB73261.1| ydiK protein [Escherichia coli TW10509] Length = 370 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 148/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKLRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|323260092|gb|EGA43717.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 337 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 9/201 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+ +C M++ Y G ++ + L + + IR+ LG+ Sbjct: 128 FMMHC---ALMLLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVV 184 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L G+ Sbjct: 185 VTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWG 243 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 T L +W A+ + +D +RP L+ LP L G++GG+ G++GLFIGPVL+A+ Sbjct: 244 TVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVT 302 Query: 339 AVI---WKESIMAIKENKEKI 356 + W + A E+I Sbjct: 303 WRLFSAWVHEVPAPTNEPEEI 323 >gi|168822229|ref|ZP_02834229.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197247934|ref|YP_002146674.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211637|gb|ACH49034.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205341339|gb|EDZ28103.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086155|emb|CBY95929.1| UPF0118 membrane protein BU123 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 372 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 6/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAVLGGIGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W A+ + +D +RP L+ LP L G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMALIAVI---WKESIMAIKENKEKI 356 LFIGPVL+A+ + W + A E+I Sbjct: 327 LFIGPVLLAVTWRLFSAWVHEVPAPTNEPEEI 358 >gi|255035092|ref|YP_003085713.1| hypothetical protein Dfer_1300 [Dyadobacter fermentans DSM 18053] gi|254947848|gb|ACT92548.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 345 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 41/342 (11%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP------LLFLFY 83 FF L AL + Y K++ + + A++ V M + P ++F Sbjct: 32 FFPGFLGALTLYILCRRYYFHLTEKRKWNKSLTAILFMVLFMACIVAPVYLALQMVFQKV 91 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 G+++ E V++ + A + R L + G +L TK + K Sbjct: 92 TGIMDNPEQVNQAIAA------ISRQLREWTG----QDLLTKEATADMGKK--------- 132 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 FIP + M+ L L I+F+ +F +++G S+ + +D P K I Sbjct: 133 -AAGFIPAILNSSAMM-LGNLLMILFLA---YFMFKNGRSMERTIDDF----IPLKHKNI 183 Query: 204 SRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + ++R+ LG+ +I++ +GLV YW+ G+ V LG+IT A P G Sbjct: 184 DLLADETCGMVRANALGIPLISLIQGLVALLGYWVVGIEDFVLLGLITGFCAFFPVIGTA 243 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + I+L KG A L + + +D R + + + T GL+ G Sbjct: 244 LIWLPLVIFLFSKGESGKAIGLAAYSVTVIGNIDYVARITFLQKVGNVHPVITILGLIAG 303 Query: 320 VRTMGLLGLFIGPVLMA---LIAVIWKESIMAIKENKEKISS 358 ++ G G GP+L++ L+ I+K + K + Sbjct: 304 LKLFGFWGFIFGPLLISYLMLLVRIYKNEFSGSRSEPVKTTE 345 >gi|161614223|ref|YP_001588188.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363587|gb|ABX67355.1| hypothetical protein SPAB_01967 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 360 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 9/201 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+ +C M++ Y G ++ + L + + IR+ LG+ Sbjct: 151 FMMHC---ALMLLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVV 207 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L G+ Sbjct: 208 VTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWG 266 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 T L +W A+ + +D +RP L+ LP L G++GG+ G++GLFIGPVL+A+ Sbjct: 267 TVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVT 325 Query: 339 AVI---WKESIMAIKENKEKI 356 + W + A E+I Sbjct: 326 WRLFSAWVHEVPAPTNEPEEI 346 >gi|254368119|ref|ZP_04984139.1| hypothetical protein FTHG_01453 [Francisella tularensis subsp. holarctica 257] gi|254369723|ref|ZP_04985733.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|134253929|gb|EBA53023.1| hypothetical protein FTHG_01453 [Francisella tularensis subsp. holarctica 257] gi|157122682|gb|EDO66811.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 346 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 137/303 (45%), Gaps = 23/303 (7%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTMMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF------NATCLFLWG-AIE 288 G+PS + G I AI +M+P F IY+LI ++F A + + G ++ Sbjct: 231 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVFVIYGVTKAIIILIIGFSLN 284 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +F D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E +M Sbjct: 285 IF-TDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIEKLMN 342 Query: 349 IKE 351 +E Sbjct: 343 NQE 345 >gi|172038736|ref|YP_001805237.1| hypothetical protein cce_3823 [Cyanothece sp. ATCC 51142] gi|171700190|gb|ACB53171.1| hypothetical protein cce_3823 [Cyanothece sp. ATCC 51142] Length = 374 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 21/265 (7%) Query: 105 PVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 P P + + P G + +WT ++ S+ + L+T + + FA G++ L + Sbjct: 119 PPPEGVENWPIIGNYVDRMWTSASNNLISVLSKFQPQLETIAKNLL-FFAGNMGLVLLKF 177 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF----PAYWKKISRIVPKVIRSTFLGMT 219 LSII I S+QL+ + +F P ++ ++ IR G+ Sbjct: 178 ILSIIVAGILTIN--------SKQLNRRIKRIFIRVTPQQGEEFLQLATATIRGVTRGII 229 Query: 220 IIAIGEGLVLGSAYWLAGVP-SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 +++ + L++G + +AG+P S + + + + G P+ F ++ I+ A Sbjct: 230 GVSLIQSLLVGIGFTVAGIPLSGLLTVLCLVLCILQIGLGPVVFPSI-IFAWYTMGTLKA 288 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL- 337 L +W I ++D LRP + + +P L F G+ GG G+LGLFIGPV+++L Sbjct: 289 LLLSIW-LIFCTLIDNILRPIFMSQGVSVPILVIFIGVFGGSLLHGILGLFIGPVVLSLG 347 Query: 338 --IAVIW-KESIMAIKENKEKISSN 359 +A+ W K+ + I N + +S+ Sbjct: 348 YELALAWVKQDVKPILNNGKPNNSD 372 >gi|89256840|ref|YP_514202.1| hypothetical protein FTL_1556 [Francisella tularensis subsp. holarctica LVS] gi|167009266|ref|ZP_02274197.1| hypothetical protein Ftulh_00695 [Francisella tularensis subsp. holarctica FSC200] gi|89144671|emb|CAJ79995.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica LVS] Length = 341 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 137/303 (45%), Gaps = 23/303 (7%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 54 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 109 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 110 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 166 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 167 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTMMTITFSM 225 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF------NATCLFLWG-AIE 288 G+PS + G I AI +M+P F IY+LI ++F A + + G ++ Sbjct: 226 VGIPSPILFGFIAAIASMVP------FMVGIIYILIGASVFVIYGVTKAIIILIIGFSLN 279 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +F D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E +M Sbjct: 280 IF-TDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIEKLMN 337 Query: 349 IKE 351 +E Sbjct: 338 NQE 340 >gi|323187112|gb|EFZ72428.1| hypothetical protein ECRN5871_4699 [Escherichia coli RN587/1] Length = 370 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 147/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G + Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVVQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|113971076|ref|YP_734869.1| hypothetical protein Shewmr4_2741 [Shewanella sp. MR-4] gi|113885760|gb|ABI39812.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 369 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 38/349 (10%) Query: 11 IMRWMIMFIILVSLYFLKGF----FAPVLS----ALIIGFTSWPIYSSFISKKEESSTFL 62 + +++ MFI L L F F+P L+ A+I+ +P + + + Sbjct: 14 VTKFLDMFIKFGMLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLNDKQGRA 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIP-GGMW 118 A + V + + ++P + + M LV +V NQ+ + VP +++IP G Sbjct: 74 ATLLIVVGLMVLVLPTITMVSSMTDNMGSLVERV---NQNTLEVPAPKESIANIPFVGAK 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++W K + SL + L I AS G + + F+I + Y Sbjct: 131 IYDVWQKASTDLPSLVKSLQPHLGEVTKQVIHALASISGSLLMSM---FSFIIAGIMMAY 187 Query: 179 -RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 R G S ++ + P K+ I IR+ LG+ +A + L++G LAG Sbjct: 188 GRAGAQSSARIAT--RIAGPERGAKLINICSTTIRAVALGVIGVAFIQALLVGIVMTLAG 245 Query: 238 VPSH-------VALGV--ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 +P + LG+ + A++ +P A I T + + G+I L L GA Sbjct: 246 IPLVGIFFILVLVLGIAQVPALLVTLPAIAYIWMTGDNGTV---GSIIYTVLLILAGA-- 300 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VD L+P L+G + P G +GG+ T G+LG+FIG L+++ Sbjct: 301 ---VDNVLKPILLGRGVDAPMPVVLIGALGGMATSGILGMFIGATLLSI 346 >gi|311233404|gb|ADP86258.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris RCH1] Length = 389 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 9/167 (5%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +DG + Q++ +L P + RI+ +V RS +G ++A+ +GL+ G A Sbjct: 190 KDGAWMVQRV----RYLSPLRIDQQDRIILELRRVGRSVLVGGLLVAVIQGLLGGVALAA 245 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+P+ + G + A +++P G + + YLL+ +A L LW I + D Sbjct: 246 VGIPA-LFWGTLMAFASLVPVVGTGLVWVPAVCYLLLTSQWESALFLSLWCGIVVVGADS 304 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LRP+ + G + +P F ++GGV+ G+LG+ GP++++ V+ Sbjct: 305 ILRPYFMRGGVGMPVFFIFLSILGGVKAFGMLGILDGPLILSFTVVM 351 >gi|260868179|ref|YP_003234581.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|257764535|dbj|BAI36030.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|323181004|gb|EFZ66542.1| hypothetical protein ECOK1180_0300 [Escherichia coli 1180] Length = 370 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 147/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G + Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVVQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|257092178|ref|YP_003165819.1| hypothetical protein CAP2UW1_0541 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044702|gb|ACV33890.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 372 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 6/241 (2%) Query: 98 LANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 L++ H P W++D+P W ++W + + + N + F Sbjct: 103 LSSLHVQSPPAWVADVPFVGWRLEQIWQQTATTGGTELAAKVAPYAANLTRWFVSEIGSF 162 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G++F+ + L++ + Y G + + G L + + + R+ L Sbjct: 163 GLVFVQFLLTVALCAV----LYASGEKAAAGVRRFGYRLSGERGEGAVILAGQAARAVAL 218 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G+ + A+ + ++ G +AGVP L + + + G + ++L + Sbjct: 219 GVGVTALVQSILGGIGLAIAGVPFAPVLTAVMFMFCIAQLGPGLVLVPAVVWLYWGDHTG 278 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 T L +W AI + +D LRP L+ LP L G++GG+ GL+GLF+GPV++A Sbjct: 279 WGTFLLIW-AIFVGTMDNFLRPVLIKQGADLPLLLILAGVIGGMLAFGLVGLFVGPVILA 337 Query: 337 L 337 + Sbjct: 338 V 338 >gi|24215055|ref|NP_712536.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45657464|ref|YP_001550.1| putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196107|gb|AAN49554.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45600703|gb|AAS70187.1| conserved putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 376 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 19/176 (10%) Query: 178 YRDGFSISQ-QLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 Y+DG + + LD+L + L +K++ V VIR G II+I +G + W Sbjct: 194 YQDGKKVERFILDNLPFSKQLEEQVGRKLTAAVQTVIR----GNLIISILQGTAIYILLW 249 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN------IFNATCLFLWGAI 287 +AG+ S + A ++IP G + + +Y+L N F + LF + + Sbjct: 250 IAGISSPFLYASLAAFFSIIPVVGTSAVWLPIGLYILFLENNPMMAIFFMGSGLFFYVVL 309 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 E F+ + L L P L F L+GG++ G++GL +GPV + L+ ++W Sbjct: 310 ENFVKPRMLDKKLQAHP-----LLIFLSLIGGIKEFGIMGLVVGPVTVTLVVILWD 360 >gi|301059634|ref|ZP_07200543.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300446280|gb|EFK10136.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 353 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/212 (21%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P++++ L + K G+ F+ S L++ + M + +++ ++DG +L Sbjct: 130 PETIENLGSSIGKNIGL-FLYNQISSVASNLLNFLIQFFLMALTMYYLFKDG----ARLK 184 Query: 190 SLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L P ++ ++ K + R+ +G + I +G++ G ++ G+ S G Sbjct: 185 RYFFELLPVPESQLEKLTDKFHEMGRAIVVGNGLSGIVQGILGGLGFYFFGLSSPFLWGT 244 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + MA +P GA F ++ L + GN A ++ +++ ++P L+G + Sbjct: 245 VISFMAFLPVIGASAVFIPTTVILFLHGNSGLALGFLIYNLSYSSVIEYLIKPRLIGQGM 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 ++ L F G++GG++ G+LG+ GP+++ + Sbjct: 305 QMNALLVFVGIIGGIKVFGILGIVYGPLIITV 336 >gi|270261590|ref|ZP_06189863.1| putative inner membrane protein [Serratia odorifera 4Rx13] gi|270045074|gb|EFA18165.1| putative inner membrane protein [Serratia odorifera 4Rx13] Length = 366 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 5/185 (2%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A+ G L L ++F ++ Y G ++ + L + + IR Sbjct: 158 AAHIGRFLLHCTLMLLFSVL----LYARGEQVALGIRHFAARLAAERGDAAVVLGGQAIR 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + LG+ + A+ + ++ G ++G+P+ L V+ I + G + I+L Sbjct: 214 AVALGVVVTALVQSVLGGIGLAVSGIPAATLLTVLIFICCVAQLGPLLVLVPAIIWLYWS 273 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G+ T L +W + + +D LRP L+ LP L G++GG+ G++GLFIGP Sbjct: 274 GDTTWGTVLLVWSCV-VATLDNVLRPVLIRMGADLPMLLILSGVIGGLLAFGMIGLFIGP 332 Query: 333 VLMAL 337 V++A+ Sbjct: 333 VVLAV 337 >gi|56413662|ref|YP_150737.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362586|ref|YP_002142223.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127919|gb|AAV77425.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094063|emb|CAR59563.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 372 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+ +C M++ Y G ++ + L + + IR+ LG+ Sbjct: 163 FMMHC---ALMLLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVV 219 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L G+ Sbjct: 220 VTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWG 278 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 T L +W A+ + +D +RP L+ LP L G++GG+ G++GLFIGPVL+ Sbjct: 279 TVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLL--- 334 Query: 339 AVIWK 343 AV W+ Sbjct: 335 AVTWR 339 >gi|114048310|ref|YP_738860.1| hypothetical protein Shewmr7_2819 [Shewanella sp. MR-7] gi|113889752|gb|ABI43803.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 369 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 38/349 (10%) Query: 11 IMRWMIMFIILVSLYFLKGF----FAPVLS----ALIIGFTSWPIYSSFISKKEESSTFL 62 + +++ MFI L L F F+P L+ A+I+ +P + S + + Sbjct: 14 VTKFLDMFIKFGMLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQSIAKRLNDKQGRA 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIP-GGMW 118 A + + + + ++P + + M LV V NQ+ + VP +++IP G Sbjct: 74 ATLLIIIGLMVLVLPTITMVSSMTDNMGSLVESV---NQNTLEVPAPKESIANIPFVGAK 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++W K + SL + L I AS G + + F+I + Y Sbjct: 131 IYDVWQKASTDLPSLVKSLQPHLGEVTKQVIHALASISGSLLMSM---FSFIIAGIMMAY 187 Query: 179 -RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 R G S ++ + P K+ I IR+ LG+ +A + L++G LAG Sbjct: 188 GRAGAQSSARIAT--RIAGPERGAKLINICSTTIRAVALGVIGVAFIQALLVGIVMTLAG 245 Query: 238 VPSH-------VALGV--ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 +P + LG+ + A++ +P A I T + + G+I L L GA Sbjct: 246 IPLVGIFFILVLVLGIAQVPALLVTLPAIAYIWMTGDNGTV---GSIIYTVLLILAGA-- 300 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VD L+P L+G + P G +GG+ T G+LG+FIG L+++ Sbjct: 301 ---VDNVLKPILLGRGVDAPMPVVLIGALGGMATSGILGMFIGATLLSI 346 >gi|123442436|ref|YP_001006415.1| putative inner membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089397|emb|CAL12245.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 367 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/350 (21%), Positives = 147/350 (42%), Gaps = 18/350 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 IM +I+ S + ++ F A ++ +WP+ A+I T+ ++ LF+ Sbjct: 21 IMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIWLQKILWGKRWLAAIIMTILLILLFV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQS 132 +P+ L + L+ + +P WL IP M ++L W ++ + Sbjct: 81 IPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSIP--MVGNKLYSGWHSLIAGGGN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQL 188 L I ++ A+ G + L ++F I+ F + G I + Sbjct: 139 LLIAKIQPYVGAAATWLVAQAAHIGYFLIHLALMVLFSILLYFHGEQVGLGIRHFAVRAA 198 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D G+ + + K IR+ LG+ + A+ + ++ G +AG+ V+ Sbjct: 199 DKRGD--------AVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLM 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I + G + I+L G+ T L +W I + +D LRP+L+ +P Sbjct: 251 FICCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCI-VGTMDNVLRPYLIRMEADMP 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 310 MILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESITE 359 >gi|312880432|ref|ZP_07740232.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] gi|310783723|gb|EFQ24121.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] Length = 373 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 6/197 (3%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHL-FPAYWKK-ISRIVPKVIRSTFLGMTIIAI 223 S++ + I+ FF RDG ++ + +G+ L P + KK +S K++++ G+ A Sbjct: 175 SLVVITISSFFLVRDGRAM---VAFVGDLLPLPFHEKKALSLRTQKMLQAVVYGIMFTAA 231 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 + + G +W G+P V G + MIP G P+ + I LL+ G+ L Sbjct: 232 IQATLGGLGWWFVGLPHPVFFGGAMFVTGMIPFVGTPVVWAPGGIVLLMTGHTQEGVLLL 291 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LWG + VD LRP + K L F G++GG+ G LGLF+GP+L++L + Sbjct: 292 LWGGGVVSTVDNFLRPLFISEGSKAHVLLVFVGVLGGLAAWGFLGLFLGPMLLSLSLFLL 351 Query: 343 KESIMAIKENKEKISSN 359 + ++E + + SS Sbjct: 352 ESYRTILREGERRASSG 368 >gi|153952049|ref|YP_001397505.1| hypothetical protein JJD26997_0286 [Campylobacter jejuni subsp. doylei 269.97] gi|152939495|gb|ABS44236.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 347 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 36/293 (12%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F YGM+E+ + + + L Q V + +P Sbjct: 56 FLASILTTACMVLLFFAP----FVYGMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E K L +S+ L +AS F + + ++ +I +F+F Sbjct: 112 NFLEPKIKEFLASIDLNSISKQIL---------SYASNFTKSGAKFLVDMV--LICVFYF 160 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 161 FANLY--GTELVIYLKSIVPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITM 218 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FI 291 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + FI Sbjct: 219 FYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFASNNLNSALVIFIYSVIIISFI 276 Query: 292 VDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 277 ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|46579600|ref|YP_010408.1| hypothetical protein DVU1189 [Desulfovibrio vulgaris str. Hildenborough] gi|120602912|ref|YP_967312.1| hypothetical protein Dvul_1868 [Desulfovibrio vulgaris DP4] gi|46449015|gb|AAS95667.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563141|gb|ABM28885.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris DP4] Length = 399 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 9/167 (5%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +DG + Q++ +L P + RI+ +V RS +G ++A+ +GL+ G A Sbjct: 200 KDGAWMVQRV----RYLSPLRIDQQDRIILELRRVGRSVLVGGLLVAVIQGLLGGVALAA 255 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+P+ + G + A +++P G + + YLL+ +A L LW I + D Sbjct: 256 VGIPA-LFWGTLMAFASLVPVVGTGLVWVPAVCYLLLTSQWESALFLSLWCGIVVVGADS 314 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LRP+ + G + +P F ++GGV+ G+LG+ GP++++ V+ Sbjct: 315 ILRPYFMRGGVGMPVFFIFLSILGGVKAFGMLGILDGPLILSFTVVM 361 >gi|85717448|ref|ZP_01048397.1| hypothetical protein NB311A_10710 [Nitrobacter sp. Nb-311A] gi|85695750|gb|EAQ33659.1| hypothetical protein NB311A_10710 [Nitrobacter sp. Nb-311A] Length = 360 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 14/206 (6%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYWKKISRIVP 208 FA G+ L + LS+ F + G SQ +++ G L+ P + + Sbjct: 159 FAGNAGVGTLKFLLSVALS----GFLFPHG---SQLMEAGGSFLYRIVPEQSEHFLALAG 211 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 IR+ G+ IAI + L+ G + LAG+ S L + I++++ GA I V I+ Sbjct: 212 ATIRAVSQGVIGIAIIQSLLAGIGFELAGLSSAGVLALAVMILSIVQIGAAIVLVPVIIW 271 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + AT L ++ + + I+D L+P ++ + P L F G++GG G++GL Sbjct: 272 IWTDKDFTTATLLTVFLGL-VGILDNVLKPLVMKRGLTTPTLVIFVGVIGGTLAHGIVGL 330 Query: 329 FIGPVLMALIAVIWKESIMAIKENKE 354 F+GP++++L W+ ++ ++ + Sbjct: 331 FVGPIILSL---AWELTVAWLRSGRS 353 >gi|294139374|ref|YP_003555352.1| hypothetical protein SVI_0603 [Shewanella violacea DSS12] gi|293325843|dbj|BAJ00574.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 376 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 84/354 (23%), Positives = 161/354 (45%), Gaps = 38/354 (10%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS----SFISKKEESSTFLAVIATVSV 70 ++ ++L + ++ F PVL II P+ +F ++ ++T +A+I Sbjct: 22 LLFMLVLWTFDIIRPFVIPVLWGAIIAVALMPLTQKLEKAFKGRRGLAATAMAIIG---- 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASELWTKHLS 128 + L ++P + L + + +V+ + + IP P + ++DIP G E+W Sbjct: 78 IALLVIPFV-LVSGSIFDGVSHAIEVLQSGEVNIPGPTQKVADIPVIGDKLYEIWA---- 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMI--FLDYCLSIIFM-IIALFF---FYRDGF 182 L T L+ F+P + G I + L+ + M II+L F + Sbjct: 133 -------LFSTNLEKAVQHFLPEIKTAVGTIASVIGSSLATLMMFIISLAIAAGFMSNAE 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH- 241 IS + ++ + ++ + + IRS LG+ +A + +++GSA ++ VP+ Sbjct: 186 KISGAISTVAVRVVGKNGEQWTTLTAATIRSVLLGVVGVAFIQSMLIGSAMFVFNVPAAG 245 Query: 242 -VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LGV+ +A +P A I Y+ + +A +W + + D L+P L Sbjct: 246 LITLGVLILGIAQLP--ALIVVLPAIFYVFSTQDTTSAIIFTVW-VLLAGVSDSFLKPML 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA-IKENK 353 +G + +P G +GG+ G++GLF+G V++A IW E MA +K +K Sbjct: 303 MGRGVDVPMPVILIGAIGGMLAAGIIGLFLGAVILA----IWYELFMAWLKADK 352 >gi|145219109|ref|YP_001129818.1| hypothetical protein Cvib_0294 [Prosthecochloris vibrioformis DSM 265] gi|145205273|gb|ABP36316.1| protein of unknown function UPF0118 [Chlorobium phaeovibrioides DSM 265] Length = 360 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 27/244 (11%) Query: 123 WTKHLSHP-------QSLKILSETFL-KTNGIDFIPRFASRFGMIFLDYCLSIIFMII-- 172 W + + P QSL E + + + + + AS+ G + + S + + Sbjct: 98 WVRQMIEPAFLDQQLQSLPFYPEMVIYREDIMQRVTEVASKTGTVLFNTLFSFTYSAVNE 157 Query: 173 ---------ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTI 220 +FFF RDG S+ + + + P R++ K V R+T G I Sbjct: 158 LFLFFIFLYTVFFFLRDGRSLLETI----LYYLPLSDADQHRLLDKFLSVTRATIKGTMI 213 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + +G + G A +AG+ S + G + +++++P G P+ + +I L G+ A Sbjct: 214 VGTVQGTLAGLALHIAGIESALFWGTMMTVLSVVPVLGPPLVWVPAAISLAFVGHYPQAL 273 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + L+ +I + +D LRP LVG +L L FFG +GG+ GL G IGP++ AL Sbjct: 274 GVLLFCSIVVGQIDNILRPILVGRDTRLHELFIFFGTLGGIGLFGLFGFIIGPIIAALFM 333 Query: 340 VIWK 343 +W+ Sbjct: 334 TVWE 337 >gi|242239096|ref|YP_002987277.1| inner membrane protein [Dickeya dadantii Ech703] gi|242131153|gb|ACS85455.1| protein of unknown function UPF0118 [Dickeya dadantii Ech703] Length = 364 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 4/178 (2%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 FL +C M++ Y G ++ + L + + + IR+ LG+ Sbjct: 165 FLMHC---ALMVLFSILLYSKGDQVALGVRRFAMRLGKQGGEAAVILAAQSIRAVALGVV 221 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + AI + L+ G L+G+P L V+ + + G + I+L G+ T Sbjct: 222 VTAIVQSLLGGIGLALSGIPYTTLLTVLMFLSCVAQLGPLMVLVPAIIWLYWTGDTTWGT 281 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +W I + +D +RP L+ LP L G++GG+ G++GLFIGPV++A+ Sbjct: 282 ILLVWSCI-VGTLDNVIRPLLIRMGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAV 338 >gi|153808104|ref|ZP_01960772.1| hypothetical protein BACCAC_02390 [Bacteroides caccae ATCC 43185] gi|149129007|gb|EDM20223.1| hypothetical protein BACCAC_02390 [Bacteroides caccae ATCC 43185] Length = 341 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G I ++ +++ MI L+F G +++++ + Sbjct: 119 LGKDTLSFIVSILPRIGQIIMEGASSLAVNLFVMIFVLYFMLIGG----KKMEAYVNDIL 174 Query: 197 P---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P A +++ R + ++RS +G+ ++AI +G V Y + G P+ + LG +T + Sbjct: 175 PFNEANTQEVIREINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNILLLGFLTCFATI 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ F+A L +GAI + D +R L L T Sbjct: 235 IPMVGTALVWFPVAAYLAISGDWFHAIGLAAYGAIVVSQSDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 IFGVVIGLPLFGFMGVIFGP 314 >gi|161503539|ref|YP_001570651.1| putative inner membrane protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864886|gb|ABX21509.1| hypothetical protein SARI_01616 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 372 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+ +C M++ Y G ++ + L + + IR+ LG+ Sbjct: 163 FMMHC---ALMLLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVV 219 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L G+ Sbjct: 220 VTALVQAVLGGIGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWG 278 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 T L +W A+ + +D +RP L+ LP L G++GG+ G++GLFIGPVL+ Sbjct: 279 TVLLVWSAV-VGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLL--- 334 Query: 339 AVIWK 343 AV W+ Sbjct: 335 AVTWR 339 >gi|116328176|ref|YP_797896.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330900|ref|YP_800618.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120920|gb|ABJ78963.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124589|gb|ABJ75860.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 375 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 19/176 (10%) Query: 178 YRDGFSISQ-QLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 Y+DG + + LD+L + L +K++ V VIR G II+I +G + Sbjct: 193 YQDGKKVERFILDNLPFSKQLEEQVGRKVASAVQTVIR----GNLIISILQGAAVYILLL 248 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN------IFNATCLFLWGAI 287 +AG+ S + + ++IP G + + + +Y+L N F + LF + A+ Sbjct: 249 VAGISSPFLYASLASFFSIIPVVGTSVVWLPIGLYILFLENNPMMAFFFMGSALFFYLAL 308 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 E FI + L L P L F L+GG++ G++GL +GPV++ L+ ++W Sbjct: 309 ENFIKPRMLDKKLQAHP-----LLIFLSLIGGIKEFGIMGLVLGPVVVTLVVILWD 359 >gi|115315228|ref|YP_763951.1| hypothetical protein FTH_1508 [Francisella tularensis subsp. holarctica OSU18] gi|115130127|gb|ABI83314.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] Length = 346 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 136/303 (44%), Gaps = 23/303 (7%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFFTAMLVGTMMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF------NATCLFLWG-AIE 288 G+PS + G I AI +M+P F IY+LI ++F A + + G ++ Sbjct: 231 VGIPSPILFGFIAAIASMVP------FIVGIIYILIGASVFVIYGVTKAIIILIIGFSLN 284 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +F D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E +M Sbjct: 285 IF-TDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIEKLMN 342 Query: 349 IKE 351 +E Sbjct: 343 NQE 345 >gi|269468325|gb|EEZ80001.1| permease [uncultured SUP05 cluster bacterium] Length = 356 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 146/335 (43%), Gaps = 42/335 (12%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 AL+I ++ Y K SS+ A++ T+ V + I+PL ++ LE+ L+ + Sbjct: 35 ALLIAIATFSQYIKLQKKISNSSS--ALLMTLLVTVVLILPLSYILLISGLEISALIQNI 92 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 L I G L SLK+ + L N +FI F Sbjct: 93 NTNFTVEQSNQLLLQTITG-----------LPLSDSLKVTLNSALSNNLENFIINI-KDF 140 Query: 157 GMIFLDYCLSI--------IFMIIALFFFYRDGFSISQQLDSLG---EHLFPAYWKKISR 205 ++ L +S+ I I +L++FY DG S ++L L HL + + S Sbjct: 141 SVVILKSIVSLSSHFIFFLIITIFSLYYFYIDGKSTVKRLKDLSPLENHLDDILFNQFSS 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + ++ S +IAI +GL+ + G+P + G+ A+ + IP G I + Sbjct: 201 LSITLVGSVL----VIAILQGLIFSIGVMMIGLPV-LFFGIAMALASFIPVLGGLIIWLP 255 Query: 265 VSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV-------GGPIKLPF-LPTFFG 315 +S+YL +G +A + +GA+ + I+D +RP ++ L L T Sbjct: 256 LSLYLYAQGQTTDALIIVFFGAVIIGTIIDHFIRPMVIKKFSQSSNQSSALDHTLITVLS 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G+ G+LGLFIGP++ A+ I+ + AIK Sbjct: 316 TLAGIMQFGILGLFIGPIIAAMAISIFD--VYAIK 348 >gi|254283806|ref|ZP_04958774.1| transporter, PerM family [gamma proteobacterium NOR51-B] gi|219680009|gb|EED36358.1| transporter, PerM family [gamma proteobacterium NOR51-B] Length = 373 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 74/375 (19%), Positives = 160/375 (42%), Gaps = 59/375 (15%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +++ FF +L A+I+ T +P++ + K + + + + ++++ + Sbjct: 24 LIALVVVACARIFAPFFGIMLWAVILAVTLFPLHQKLVPKFDGRAGRASTLMVLAILLIL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--G----GMW--ASELWTKH 126 VP++ L + +++S + PV + IP G +W ASE + Sbjct: 84 GVPMVTLGISAVDHTTDVLSNMKSGEFEVPPVNPAVGKIPIVGENLIALWESASEDFAGT 143 Query: 127 L-SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L H + + L + S G + L S+I + + + + ++ Sbjct: 144 LRDHKDQVSHYASVLLNSA--------TSMLGAVLLSMG-SMIIAGVMMAYGHAGAAAME 194 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L +L +++ R+ +RS +G+ +A+ + L+LG + LAG+P A G Sbjct: 195 RVLHALVGDAGNNRGQQVLRLSTATVRSVAVGVIGVALIQALLLGVGFLLAGIP---AAG 251 Query: 246 VIT------------AIMAMIP---------GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 ++T A++ +P G+ ++ + S+Y ++ G Sbjct: 252 LLTFAVFFLGILQLPALLITLPIIAYLWGVGDGSTLANSIASVYFIVAGT---------- 301 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D L+P L+G + P G +GG+ +MG+LGLF+G V++A+ I+ Sbjct: 302 -------ADGFLKPMLLGRGVDAPMPVILLGALGGMVSMGMLGLFVGAVVLAVGYQIFMA 354 Query: 345 SIMAIKENKEKISSN 359 + + + +E ++S Sbjct: 355 WVDFVCDGREPLTSQ 369 >gi|189347655|ref|YP_001944184.1| hypothetical protein Clim_2181 [Chlorobium limicola DSM 245] gi|189341802|gb|ACD91205.1| protein of unknown function UPF0118 [Chlorobium limicola DSM 245] Length = 376 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 21/196 (10%) Query: 174 LFFFYRDGFSISQQ------LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +FFF +DG + ++ LD + ++ + R + V R+T G ++ + +G Sbjct: 184 MFFFLKDGRLLLEKIMYYVPLDESDQ------YRLLDRFL-SVTRATLKGTMVVGLIQGS 236 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 V G A LAG+ S + G I ++++++P G P+ + +IYL + G+ A +FL+ + Sbjct: 237 VAGLALHLAGIESALFWGTIMSVLSVVPVLGPPLVWLPAAIYLAVTGHYTEAAAVFLFCS 296 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--- 343 I + +D LRP L+G ++ L FFG +GG+ GL G IGP++ AL +W+ Sbjct: 297 IIVSQLDNVLRPILIGRDTQMHELMIFFGTLGGLGLFGLFGFIIGPIVAALFITVWEIYG 356 Query: 344 ----ESIMAIKENKEK 355 + + +K E+ Sbjct: 357 ETFSDYLQEVKRKSER 372 >gi|291616655|ref|YP_003519397.1| YdiK [Pantoea ananatis LMG 20103] gi|291151685|gb|ADD76269.1| YdiK [Pantoea ananatis LMG 20103] gi|327393082|dbj|BAK10504.1| permease YdiK [Pantoea ananatis AJ13355] Length = 397 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 77/342 (22%), Positives = 145/342 (42%), Gaps = 33/342 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L +F+ +L A ++ P+ ++ K LA + T+ +CL + L + M Sbjct: 26 LAPYFSAILWAAVLAVIFHPL-KRYLRGKLGDRNGLASLLTLVCICLIVFTPLAIIASSM 84 Query: 87 LEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + V + N PV L +PG W KH +L ++ K + Sbjct: 85 VVEVNTVYHKLQTNSAQFPVVFADLLQHLPG-------WAKHYLAENNLDNATQIQQKLS 137 Query: 145 -----GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-FSISQQLDSL------G 192 G ++ A G + + M+ LFF +DG + + L++L Sbjct: 138 AFALKGGQYLAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLILEALPLSTYVK 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 HLF + V R+T G ++ + +G++ G A+W G+ + G + ++ Sbjct: 198 HHLFMKF--------AAVSRATVKGTVVVGVVQGILGGLAFWFTGIDGSLLWGALMGFLS 249 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G+ I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 250 LVPAVGSAIIWVPATIFFFATGALWKGLFLVGFFVVVVGLVDNILRPLLVGKDTKMPDYL 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +GG+ G+ G IGPV+ AL W ++++ ++N+ Sbjct: 310 ILITTLGGMEIYGINGFVIGPVIAALFIACW--NLLSGRDNR 349 >gi|169630868|ref|YP_001704517.1| hypothetical protein MAB_3788c [Mycobacterium abscessus ATCC 19977] gi|169242835|emb|CAM63863.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 379 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/324 (20%), Positives = 139/324 (42%), Gaps = 17/324 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF---IVPLL 79 +YFL+ + ++ A + + P+Y + K+ S + AT++++C ++P+ Sbjct: 24 GIYFLRDYLILIVVAGVAAYLFSPLYRR-LGKRFGS----GIAATLTLLCALGAVVIPVG 78 Query: 80 FLFYYGMLEMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L Y L++ +V V + + + D+ + A + P +L+ Sbjct: 79 ALVYVATLQITRMVDDVSSWVEGTDMTALGQKAFDVVNSVLARIPFVHVQLTPDTLRQSI 138 Query: 138 ETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + G + S G + C+ +++ ++L ++ +QL+ LGE + Sbjct: 139 GSLTENVGHGLLQVLQSTVGSVAAAVAACIIFLYVFVSLLVKQDKVLTLLRQLNPLGEEI 198 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL-GVITAIMAMI 254 Y KI +V R T G +IA+ +G+ ++ ++AG ++ +++I Sbjct: 199 TDLYLDKIGAMV----RGTVKGQFVIAMAQGIAGAASVYVAGFRQGFFFFAILLTALSII 254 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P G I I +++ G+ + W + + +D LRPFLV +L Sbjct: 255 PLGGGIVTIPFGIGMILFGHPVGGLFVIAWHLLVVSNIDNVLRPFLVPRGARLDPALMLL 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALI 338 + G+ G G+ +GPVLM +I Sbjct: 315 AVFSGIAAFGFWGIVLGPVLMIVI 338 >gi|312797187|ref|YP_004030109.1| hypothetical protein RBRH_01983 [Burkholderia rhizoxinica HKI 454] gi|312168962|emb|CBW75965.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 363 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 73/343 (21%), Positives = 139/343 (40%), Gaps = 22/343 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SLY + F ++ A +I +WP+ + + +++ + +PL Sbjct: 27 SLYIMSPFLPALIWATMIVVATWPLMRGAQERLGGRRGRATALMLAALLIVIALPL---- 82 Query: 83 YYGMLEMKELVSKVVLANQHGIPV------PRWLSDIPG-GMWASELWTKHLSHPQSLKI 135 YG + + +L +P P WL ++P G + W + L+H + Sbjct: 83 -YGAVVAIAAHADTILQYARALPDYRPAPPPAWLHEVPLIGERITSAWQR-LTHAGVDGL 140 Query: 136 LS-ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L G ++ A+ G + + ++ +I Y G + + + Sbjct: 141 LEFVAPYADTGAKWMVSHATAVGGVL----IHLLLTLILCGVLYMHGETAAGAVRRFAYR 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L R+ + IR+ LG+ + A + + G + AG+P + IT I+ + Sbjct: 197 LADERGTAAVRLAGQAIRAVALGIVVTAAVQSALAGLGLFAAGIPGAGMVCAITLILCLA 256 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + +I+L + + +W A + +D +RP L+ + LP L Sbjct: 257 QIGPLLPLIGAAIWLFYQDATIAGVAMLVW-AFVVSSLDNVIRPPLIQRGVDLPMLLVLA 315 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+VGG+ G++GLFIGPV++ AV +K I E + +S Sbjct: 316 GVVGGLIAFGIVGLFIGPVIL---AVTYKLMHAWIDEQAKAVS 355 >gi|315931421|gb|EFV10389.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 347 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F Y M+E+ + + + L Q V + +P Sbjct: 56 FLASILTTTCMVLLFFAP----FVYAMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIAL 174 E K L +S+ L +AS F G FL I ++I + Sbjct: 112 NFLEPKIKEFLASIDLNSISKQIL---------SYASSFTKSGAKFL-----IDMVLICV 157 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+F+ + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 158 FYFFANLY--GTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGL 215 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + Sbjct: 216 ITMFYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFTSNNLNSALVIFIYSVIVI 273 Query: 290 -FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 274 SFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|311279418|ref|YP_003941649.1| hypothetical protein Entcl_2111 [Enterobacter cloacae SCF1] gi|308748613|gb|ADO48365.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 374 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + ++ G ++GVP L V+ ++ G I I+ Sbjct: 209 QAIRAVALGVVVTALVQAVLGGIGLAISGVPYATLLTVVMIFSCLVQLGPLIVLVPSIIW 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D +RP L+ LP + G++GG+ G++GL Sbjct: 269 LYWSGDTTWGTVLLVWSCV-VGTMDNFIRPVLIRMGADLPMILIISGVIGGLIAFGMIGL 327 Query: 329 FIGPVLMALIAVI---WKESIMAIKENKEKI 356 FIGPVL+A+ + W + +N E++ Sbjct: 328 FIGPVLLAVTWRLFDTWMREVPPPSDNPEEV 358 >gi|92116459|ref|YP_576188.1| hypothetical protein Nham_0862 [Nitrobacter hamburgensis X14] gi|91799353|gb|ABE61728.1| protein of unknown function UPF0118 [Nitrobacter hamburgensis X14] Length = 360 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 71/330 (21%), Positives = 145/330 (43%), Gaps = 11/330 (3%) Query: 31 FAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P+L+ ++++ +P++ A + T+ + + I P +L + + Sbjct: 37 FVPILAWSIVLTVALYPVFDLLSRLLGGRPRLAAALLTLINLGIVIGPATWLGLSALDGV 96 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 KEL ++ N P + D P G E W + S+ ++ +LK Sbjct: 97 KELAGQLNAGNLVVPSPPEGVKDWPLIGPNLYEFWNQASSNIRAALREVAPYLKPLA-GV 155 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A G+ L + LS+ F + G + + S + P + + Sbjct: 156 LLALAGNAGVGTLKFLLSVALA----GFLFPYGSQLIEAGKSFLYRIVPEQSEHFLELAG 211 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 IR+ G+ +AI + L+ G + LAG+ S L I++++ GA I V I+ Sbjct: 212 ATIRAVSQGVIGVAIIQSLLAGIGFKLAGISSAGLLAFAVMILSIVQVGAAIVLVPVIIW 271 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + A L ++ + + ++D L+P ++ + P L F G++GG G++GL Sbjct: 272 IWMDKDFTTALLLTVFLGL-VGVLDNVLKPLVMKRGLTTPTLVIFVGVIGGTLAHGIVGL 330 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 FIGP++++L W+ ++ I+ ++ +S Sbjct: 331 FIGPIILSL---AWELTVAWIRSDRAGTAS 357 >gi|238765277|ref|ZP_04626205.1| hypothetical protein ykris0001_43250 [Yersinia kristensenii ATCC 33638] gi|238696500|gb|EEP89289.1| hypothetical protein ykris0001_43250 [Yersinia kristensenii ATCC 33638] Length = 367 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 13/210 (6%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQLDSLGEHLFPAYWKKISRIVP 208 A+ G + L ++F I+ F + G I + D G+ + + Sbjct: 159 AAHIGYFLIHLALMVLFSILLYFHGEQVGLGIRHFAVRAADKRGD--------AVVVLAA 210 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 K IR+ LG+ + A+ + ++ G +AG+ V+ I + G + I+ Sbjct: 211 KAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLMFICCVAQLGPLLIMIPAVIW 270 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D LRP+L+ +P + G++GG+ + G++GL Sbjct: 271 LYWTGDSTWGTILLVWSCV-VGTMDNVLRPYLIRMEADMPMILILSGVIGGLLSFGMIGL 329 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 FIGPV++A+ + + E +E I+ Sbjct: 330 FIGPVVLAISYRLTSAWVSEAPEPEESITE 359 >gi|148261662|ref|YP_001235789.1| hypothetical protein Acry_2679 [Acidiphilium cryptum JF-5] gi|326405154|ref|YP_004285236.1| hypothetical protein ACMV_30070 [Acidiphilium multivorum AIU301] gi|146403343|gb|ABQ31870.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|325052016|dbj|BAJ82354.1| hypothetical protein ACMV_30070 [Acidiphilium multivorum AIU301] Length = 352 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 79/137 (57%), Gaps = 2/137 (1%) Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI 275 G +++ +GL+ G +W G+ + + GV+ +++++P GA I + ++ L + G+ Sbjct: 212 GTVMVSTLQGLLGGLMFWGLGLAAPLLWGVVMGMLSLVPVLGAFIVWIPEAVLLALNGHE 271 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A L LWGA+ + +D +RP LVG ++L +P+F ++GG+ G G +GP+++ Sbjct: 272 EKAIILSLWGALVVGTIDNVVRPVLVGNRLQLHTVPSFIAIIGGLILFGPPGFVLGPLIV 331 Query: 336 ALIAVIWKESIMAIKEN 352 + V++ E++ A E Sbjct: 332 SATLVLF-EALRARAEG 347 >gi|238796346|ref|ZP_04639855.1| hypothetical protein ymoll0001_21740 [Yersinia mollaretii ATCC 43969] gi|238719791|gb|EEQ11598.1| hypothetical protein ymoll0001_21740 [Yersinia mollaretii ATCC 43969] Length = 367 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 75/359 (20%), Positives = 154/359 (42%), Gaps = 30/359 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IATVSVMCLF 74 I+ +I+ S + ++ F A ++ +WP+ + K +LAV I T+ ++ LF Sbjct: 21 ILIMIVASFWVVQPFIMGFAWAGMVVIATWPLLIR-LQKLLWGKRWLAVFIMTLLLILLF 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQ 131 ++P+ L + L+ + +P WL +P M +L W ++ Sbjct: 80 VIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQSVP--MVGDKLYNSWHTLIAGGG 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQ 187 + I ++ A+ G + L ++F ++ F + G I + Sbjct: 138 NAIIAKVQPYVGAAATWLVAQAAHVGYFLIHLALMVLFSVLLYFHGEQVGLGIRHFAVRA 197 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 D G+ + + K IR+ LG+ + A+ + ++ G +AG+ V+ Sbjct: 198 ADKRGD--------AVVVMAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVL 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I + G + ++L G+ T L +W + + +D LRP+L+ + Sbjct: 250 MFICCVAQLGPLLILVPAILWLYWTGDTTWGTVLLVWSCV-VGTMDNFLRPYLIRMEADM 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIW-------KESIMAIKENKEKI 356 P + G++GG+ + G++GLFIGPV++A+ + W +ESI + ++ E++ Sbjct: 309 PMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVNEAPEPEESIKEVAKHLEEL 367 >gi|269139133|ref|YP_003295834.1| predicted permease [Edwardsiella tarda EIB202] gi|267984794|gb|ACY84623.1| predicted permease [Edwardsiella tarda EIB202] gi|304559059|gb|ADM41723.1| Putative membrane protein [Edwardsiella tarda FL6-60] Length = 365 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 4/155 (2%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + ++ G ++G+ V L V+ I + G + + Sbjct: 208 QAIRAVALGVVVTALAQSVLAGIGLAISGIHYAVLLTVVMFICCLAQLGPLLVLIPAVAW 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ AT L +W + + +D LRP L+ LP L G++GG+ G++GL Sbjct: 268 LYWSGDNTWATVLLVWSGV-VGTMDNVLRPALIRLGADLPMLLVLSGVIGGLLAFGMIGL 326 Query: 329 FIGPVLMAL---IAVIWKESIMAIKENKEKISSNF 360 FIGPV++A+ + +W A + ++S Sbjct: 327 FIGPVVLAVSYRLVSVWISEAPAPLRDARQVSEEL 361 >gi|300722815|ref|YP_003712107.1| putative transport protein [Xenorhabdus nematophila ATCC 19061] gi|297629324|emb|CBJ89923.1| putative transport protein [Xenorhabdus nematophila ATCC 19061] Length = 369 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A+ G L L +IF ++ Y G + + L + + IR Sbjct: 158 AANAGRFLLHLALMVIFSVL----LYWKGEQVMLSIRHFAIRLADKRGDSAVLLAAQSIR 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + LG+ + A+ + + G +AG+P + L V + + G + +L Sbjct: 214 AVALGVVVTALVQAIAGGIGLAIAGIPYPLILTVTMFVCCVAQLGPLLVLIPSIAWLYWT 273 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G+ T L +W + L +D LRPFL+ LP + G++GG+ ++G++GLFIGP Sbjct: 274 GDTTWGTILAIWSLV-LTTMDGVLRPFLIRLGADLPMVLILTGVIGGILSLGVIGLFIGP 332 Query: 333 VLMAL 337 V++A+ Sbjct: 333 VVLAV 337 >gi|237715047|ref|ZP_04545528.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409005|ref|ZP_06085550.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645608|ref|ZP_06723301.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|229444880|gb|EEO50671.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353216|gb|EEZ02311.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639053|gb|EFF57378.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|295087834|emb|CBK69357.1| Predicted permease [Bacteroides xylanisolvens XB1A] Length = 341 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G I ++ +++ MI L+F G +++++ + Sbjct: 119 LGKDTLTFIVSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGG----KKMEAYVNDIL 174 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P ++ ++ +RS +G+ ++AI +G V Y L G P+ + LG +T + Sbjct: 175 PFNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVATIGYLLFGAPNILLLGFLTCFATI 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ FNA + +GAI + D +R L L T Sbjct: 235 IPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 IFGVVIGLPLFGFMGVIFGP 314 >gi|222480361|ref|YP_002566598.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222453263|gb|ACM57528.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 346 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 V + R +G ++A+ + LV G W AG+P+ V + A++A++P GA + Sbjct: 200 VDAMTRGVVIGHIVVALLQALVAGLGLWAAGIPNVVFWTFVMAVLALVPLVGAFFVWGPA 259 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + YL+ + L ++G + + +VD RP ++ L G+ GG+ ++G Sbjct: 260 AAYLVAIDQVTAGVFLAIYGVLVIAMVDNYARPIVIDQQAHLNPAVILLGVFGGIYSIGF 319 Query: 326 LGLFIGPVLMALIA 339 GLF+GP+++ ++A Sbjct: 320 TGLFVGPIVIGVLA 333 >gi|205356191|ref|ZP_03222958.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8421] gi|205346034|gb|EDZ32670.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8421] Length = 312 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%) Query: 61 FLAVIATVSVMCL-FIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M L F P F Y M+E+ + + + L Q V + +P Sbjct: 21 FLASILTTACMVLLFFAP----FVYAMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 76 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIAL 174 E K L +S+ L +AS F G FL I ++I + Sbjct: 77 NFLEPKIKEFLASVDLNSISKQIL---------SYASSFTKSGAKFL-----IDMVLICV 122 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+F+ + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 123 FYFFANLYG--TELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGL 180 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + Sbjct: 181 ITMFYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFASNNLNSALVIFIYSVIVI 238 Query: 290 -FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 239 SFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 294 >gi|74311987|ref|YP_310406.1| putative inner membrane protein [Shigella sonnei Ss046] gi|73855464|gb|AAZ88171.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323169258|gb|EFZ54934.1| hypothetical protein SS53G_0428 [Shigella sonnei 53G] Length = 370 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 73/325 (22%), Positives = 149/325 (45%), Gaps = 17/325 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++Q + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS-AYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + VLGS ++GVP L V+ + + Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQA-VLGSIGLAVSGVPYATLLTVLMILSCL 253 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 254 VQLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|238919816|ref|YP_002933331.1| hypothetical protein NT01EI_1920 [Edwardsiella ictaluri 93-146] gi|238869385|gb|ACR69096.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 365 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 4/155 (2%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + ++ G ++G+ V L V+ I + G + + Sbjct: 208 QAIRAVALGVVVTALAQSVLAGIGLAISGIHYAVLLTVVMFICCLAQLGPLLVLIPAVAW 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ AT L +W + + +D LRP L+ LP L G++GG+ G++GL Sbjct: 268 LYWSGDNTWATVLLVWSGV-VGTMDNVLRPALIRLGADLPMLLVLSGVIGGLLAFGMIGL 326 Query: 329 FIGPVLMAL---IAVIWKESIMAIKENKEKISSNF 360 FIGPV++A+ + +W + A ++ ++ Sbjct: 327 FIGPVVLAVSYRLVSVWISEVPAPLKDARQVHREL 361 >gi|300870109|ref|YP_003784980.1| hypothetical protein BP951000_0476 [Brachyspira pilosicoli 95/1000] gi|300687808|gb|ADK30479.1| putative exported protein [Brachyspira pilosicoli 95/1000] Length = 394 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 12/188 (6%) Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG + +Q+ SL P K + R+ + IR G I +G+ Y + Sbjct: 187 DGEYLKEQVSSL----IPIEKKYLDRLFKQASEGIRGIIFGNLFTGIFQGICAFIVYSIF 242 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 GV + + ++T I + +P G I + + + +I G I A + + I D Sbjct: 243 GVTNSLTFALLTIIASFMPIIGTTIIWIPLGVLFIINGEILRAIIFLVVSWFFITIPDNF 302 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK----ESIMAIKE 351 +RP L+G I+L L FF ++GGV GL G+ +GP+ L I + E + + KE Sbjct: 303 VRPLLLGNRIELHPLFIFFAILGGVLFFGLSGIILGPLTFILFFEIMRMYNEERLFSDKE 362 Query: 352 NKEKISSN 359 K++ +N Sbjct: 363 EKKRAVNN 370 >gi|198276942|ref|ZP_03209473.1| hypothetical protein BACPLE_03147 [Bacteroides plebeius DSM 17135] gi|198270467|gb|EDY94737.1| hypothetical protein BACPLE_03147 [Bacteroides plebeius DSM 17135] Length = 338 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 4/173 (2%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTI 220 D +++ I+ LFF +G S+ + +L F A K ++ + V ++RS +G+ + Sbjct: 140 DLLVNLCVAIMLLFFMLYEGKSMEHYVSTLLP--FKAENKIEVLKKVQLMVRSNAIGIPL 197 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 +AI +G + Y + P+ ++TA ++IP G + + ++IY LI G+ NA Sbjct: 198 LAIIQGFISLGGYLICDAPNPFLSAMLTAFASVIPLVGTALVWVPITIYFLIVGSWVNAL 257 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +GAI + D +R L + L T FG+V G+ G +G+ GP Sbjct: 258 MMLGYGAIIVSQCDNLIRFLLQKKMADVHPLITIFGVVAGLPLFGFMGVIFGP 310 >gi|157415601|ref|YP_001482857.1| hypothetical protein C8J_1281 [Campylobacter jejuni subsp. jejuni 81116] gi|283956749|ref|ZP_06374225.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 1336] gi|157386565|gb|ABV52880.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 81116] gi|283791724|gb|EFC30517.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 1336] gi|307748244|gb|ADN91514.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] Length = 347 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F Y M+E+ + + + L Q V + +P Sbjct: 56 FLASILTTTCMVLLFFAP----FVYAMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIAL 174 E K L +S+ L +AS F G FL I ++I + Sbjct: 112 NFLEPKIKEFLASIDLNSISKQIL---------SYASSFTKSGAKFL-----IDMVLICV 157 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+F+ + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 158 FYFFANLY--GTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGL 215 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + Sbjct: 216 ITMFYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFASNNLNSALVIFIYSVIVI 273 Query: 290 -FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 274 SFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|300023545|ref|YP_003756156.1| hypothetical protein Hden_2034 [Hyphomicrobium denitrificans ATCC 51888] gi|299525366|gb|ADJ23835.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 354 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 145/320 (45%), Gaps = 17/320 (5%) Query: 25 YFLKGFFAPVLSAL----IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 Y APVL+ L I+ +PIY +++ S F A T+ M + + P+ + Sbjct: 28 YLSFAIVAPVLTILVWSAILTVALYPIYR-WLAHWLNSPKFAAAFVTLLCMLVVLAPVTW 86 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQS-LKILS 137 L +G+L E++ + L + IP P + D P G LWT+ ++ S L L+ Sbjct: 87 L-GFGLLNGVEVIVQK-LDSGLSIPAPPESIKDWPIAGDQIYRLWTRAITDISSQLAELA 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 G ++ + AS + L + LSII F + G + + L + E + Sbjct: 145 PALKPVAG--WLLQVASNVLIGLLKFLLSIIVA----GFLFCPGPKLVKVLARIMERVLN 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + IR+ G+ +A+ + + G + +AGVP + ++ ++ G Sbjct: 199 PRGTEMVELAGATIRNISRGVLGVALLQSFLGGIGFLVAGVPGAGIFAFASLVLGILQIG 258 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + F + ++ + +A LF + + ++D LRP L+ + P L G++ Sbjct: 259 PGVLFLPILVWSWMTQEALHA-LLFTAYMVPIGLLDNVLRPILMTRGLTTPMLVIVIGVI 317 Query: 318 GGVRTMGLLGLFIGPVLMAL 337 GG G++GLF+GP+++++ Sbjct: 318 GGTIAYGIIGLFVGPIILSV 337 >gi|317406579|gb|EFV86769.1| hypothetical protein HMPREF0005_05760 [Achromobacter xylosoxidans C54] Length = 368 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 161/353 (45%), Gaps = 30/353 (8%) Query: 8 PQGIMRWMIMFIILV-----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 P + R +++ +IL SLY LK F ++ A I +WP+ + + ++ +L Sbjct: 8 PADLARNLLVVVILSALMIGSLYVLKPFLFGLIWATTIVVATWPVMLA-VQRRCGGRRWL 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV------PRWLSDIP-G 115 A +A M + ++ ++ L Y + L ++ G+P P W+ IP G Sbjct: 67 ATVA----MLIVLLVVIVLPLYQAISTLALHGGAIMTAIKGLPDYALMAPPGWVRGIPLG 122 Query: 116 GMWASELWTKHLSHPQSLKILS--ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G + W + L+ + +L+ E ++ T ++ A+ G+ + ++I+ I Sbjct: 123 GERIAHEW-QALADAGAGGLLARLEPYI-TMAAKWLLSNAAIVGVFVMHMLITIVIAGI- 179 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 Y G + + L R+ IR+ LG+ + A+ + + G Sbjct: 180 ---LYSQGDVAANFMQRFANRLAGHRGVAAIRLAGLSIRAVALGIVVTAVVQSALGGLGL 236 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFI 291 W+AGVP A G+ITA+M M+ F + + L + ++ A L L A+ + + Sbjct: 237 WIAGVP---AAGIITALMLMLCLAQLGPFLPLLGGVIWLFQNDMKVAAVLLLVWAVLVTM 293 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +D LRP L+ + L L G++GG+ G++GLFIGPV++A+ + + K Sbjct: 294 LDNLLRPLLIKRGVNLSMLLILAGVLGGMFAFGIVGLFIGPVILAVTSTLLKA 346 >gi|323956589|gb|EGB52327.1| ydiK protein [Escherichia coli H263] Length = 247 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+ +C M++ Y G ++Q + L + + IR+ LG+ Sbjct: 40 FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVV 96 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L G+ Sbjct: 97 VTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWG 155 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 T L +W + + +D +RP L+ LP + G++GG+ G++GLFIGPVL+A+ Sbjct: 156 TVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAV 213 >gi|27378566|ref|NP_770095.1| hypothetical protein blr3455 [Bradyrhizobium japonicum USDA 110] gi|27351714|dbj|BAC48720.1| blr3455 [Bradyrhizobium japonicum USDA 110] Length = 351 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 15/179 (8%) Query: 192 GEHLFPAYWKKISRIVPK-----------VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L A +SRIVP+ IR+ G+ IA+ + L+ G + LAG+P Sbjct: 172 GPQLVAAGRSFLSRIVPEQSEHFLDLAGATIRAVAQGVIGIAVVQALLAGIGFKLAGIPI 231 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ +++++ G I V I++ ++ A L L+ I + I+D L+P + Sbjct: 232 AGLLALLVLLLSIVQIGGAIIMLPVMIWIWTDKDVTVAVLLTLFLGI-VSILDNILKPLV 290 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G + P L G++GG G++GLFIGP+++ +V W+ ++ I+ ++ +S Sbjct: 291 MGRGLTTPALVILIGVIGGTLGHGIVGLFIGPIVL---SVAWELTVAWIRTDRASAASQ 346 >gi|282158796|gb|ADA78187.1| hypothetical protein NE061598_02800 [Francisella tularensis subsp. tularensis NE061598] Length = 341 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/307 (21%), Positives = 135/307 (43%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 54 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 109 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 110 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 166 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 167 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTMMTITFSM 225 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 +PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 226 VDIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 274 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 275 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 333 Query: 345 SIMAIKE 351 +M +E Sbjct: 334 KLMNNQE 340 >gi|240171099|ref|ZP_04749758.1| hypothetical protein MkanA1_17441 [Mycobacterium kansasii ATCC 12478] Length = 385 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 77/345 (22%), Positives = 147/345 (42%), Gaps = 19/345 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L + + + M +L YFL+ +F ++ A + + P+++ F K S+ Sbjct: 4 EFTLTQKRALAILTMVALLFGAYFLRDYFVLIVVAAVGAYLFTPLFTWF--NKRLSTGLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL------ANQHGIPVPRWLSDIPGG 116 A ++ + +P+ L ++++ +V V ++ G V R ++D Sbjct: 62 ATCTVLTALASVFIPVALLVALAVVQVARMVDNVAEWFNTTDPSELGDKVLRLVND---- 117 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM-IIALF 175 + A + P+ L+ + +T G + G + +I+F+ + Sbjct: 118 LLARVPFLHVTVTPEMLRNAMISAARTVGTWLLHVLQGAAGSLAGAVTSAIVFLYVFVAL 177 Query: 176 FFYRDGF-SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 RD ++ QL+ LGE + Y +K+ +V R T G +IA+ +G+ ++ + Sbjct: 178 LLNRDKLRTLIGQLNPLGEEVTDLYLRKMGSMV----RGTVNGQFVIALCQGVAGAASIY 233 Query: 235 LAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 LAG + ++ +++IP G I I ++ GNI + LW + + +D Sbjct: 234 LAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGVFVVLWHLLVVTNID 293 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 294 NFLRPILVPRDARLNSALMLLSVFAGIGMFGPWGIIIGPVLMILI 338 >gi|149189962|ref|ZP_01868241.1| hypothetical protein VSAK1_01632 [Vibrio shilonii AK1] gi|148836277|gb|EDL53235.1| hypothetical protein VSAK1_01632 [Vibrio shilonii AK1] Length = 378 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 156/346 (45%), Gaps = 28/346 (8%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLA 63 + +R ++ I+L Y +K F PVL II P+ SS K+ ++T ++ Sbjct: 19 ESAIRIGLLVILLTFTYDIIKPFIIPVLWGSIIAVALLPLTKKLESSLGGKRGLAATLVS 78 Query: 64 VIATVSVMCLFIVPLLFL---FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMW 118 +I + L ++P + + Y G+ E V+ + + IP P ++DIP G Sbjct: 79 LIG----ISLLVIPFVMVSGSIYEGVAHTTE----VIQSGEIKIPGPTSKVADIPVIGDK 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +W ++ + K + + + G F+ AS G + II + IA F Sbjct: 131 LYSIWNLFATNME--KAIQQFLPEIKG--FLGTVASILGGALTSLIMFIISLAIAGGFMA 186 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 IS L+++ ++ + ++ IRS LG+ +A + ++G+A ++ V Sbjct: 187 H-AEKISGALETVAVRAVGKKAEQWANLMAATIRSVLLGVVGVAFIQAAIIGAAMFVFKV 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ L + T I+ + A + V Y+ G+ + T +W A+ + D L+P Sbjct: 246 PAAGLLTLATLILCIAQLPALLIVAPVIFYVYSTGDGTSTTLFTIW-ALAGGLSDNILKP 304 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+G + +P G +GG+ G++GLF+G +++A IW E Sbjct: 305 MLMGRGVDVPMPIILIGAIGGMLFAGIIGLFLGAIILA----IWYE 346 >gi|86151004|ref|ZP_01069220.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315124803|ref|YP_004066807.1| hypothetical protein ICDCCJ07001_1299 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842174|gb|EAQ59420.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315018525|gb|ADT66618.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 347 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F Y M+E+ + + + L Q V + +P Sbjct: 56 FLASILTTACMVLLFFAP----FVYAMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIAL 174 E K L +S+ L +AS F G FL I ++I + Sbjct: 112 NFLEPKIKEFLASIDLNSISKQIL---------SYASSFTKSGAKFL-----IDMVLICV 157 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+F+ + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 158 FYFFANLY--GTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGL 215 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + Sbjct: 216 ITMFYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFASNNLNSALVIFIYSVIVI 273 Query: 290 -FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 274 SFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|56707640|ref|YP_169536.1| hypothetical protein FTT_0501c [Francisella tularensis subsp. tularensis SCHU S4] gi|110670111|ref|YP_666668.1| hypothetical protein FTF0501c [Francisella tularensis subsp. tularensis FSC198] gi|224456709|ref|ZP_03665182.1| hypothetical protein FtultM_02652 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370155|ref|ZP_04986161.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874457|ref|ZP_05247167.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604132|emb|CAG45134.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320444|emb|CAL08517.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151568399|gb|EDN34053.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840456|gb|EET18892.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 346 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/307 (21%), Positives = 135/307 (43%), Gaps = 31/307 (10%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S+F+ VIA + +C+FI PLL + Y + E+ + +Q + + +++IP Sbjct: 59 RHKSSFIIVIAIL--LCIFI-PLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP- 114 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +H + ++ + + +N +P G + + ++ ++ Sbjct: 115 --YIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVY 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S+ + L + F IS + R L + + A+ G ++ + + Sbjct: 172 QFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATT-RRVSLAIFLTAMLVGTMMTITFSM 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 +PS + G I AI +M+P F IY+LI ++F ++GA + I+ Sbjct: 231 VDIPSPILFGFIAAIASMVP------FMVGIIYILIGASVF-----VIYGATKAIIILII 279 Query: 293 --------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P ++ +KL F+ + G++GG+ G +G+F+GPV+ +A + E Sbjct: 280 GFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLGPVIFN-VAFVGIE 338 Query: 345 SIMAIKE 351 +M +E Sbjct: 339 KLMNNQE 345 >gi|293396334|ref|ZP_06640612.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291421123|gb|EFE94374.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 349 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 34/310 (10%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 +WP+ + + ++ T+ ++ LF++P+ L + +V+ + Sbjct: 30 ATWPLLIKLQNLLWGRRSLAVLVMTLILIVLFVMPIALLVNSVVDNSAPIVAWASTPGKV 89 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI--- 159 IP WL+ IP M ++++ + T + + G I + FG Sbjct: 90 HIPDLAWLNSIP--MIGDKVYSSY-----------HTLINSGGGALIAKVQPYFGQTATW 136 Query: 160 ----------FLDYC-LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 FL +C L ++F ++ Y G ++ + L + Sbjct: 137 FAAQAAHIGRFLMHCSLMVLFSVL----LYARGEQVALGIRHFAVRLGAERGDAAVLLGG 192 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ + G+P+ L V+ I + G P+ A+ I Sbjct: 193 QAIRAVALGVVVTALVQSVLGAIGLAITGIPAATLLAVLMFIFCVAQLGPLPVLIPAI-I 251 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W + + +D LRP L+ LP + G++GG+ G++G Sbjct: 252 WLYWSGDTTWGTVLLVWSCV-VGTLDNFLRPVLIRMGADLPMILILSGVIGGLLAFGMIG 310 Query: 328 LFIGPVLMAL 337 LFIGPV++A+ Sbjct: 311 LFIGPVVLAV 320 >gi|167753079|ref|ZP_02425206.1| hypothetical protein ALIPUT_01349 [Alistipes putredinis DSM 17216] gi|167659393|gb|EDS03523.1| hypothetical protein ALIPUT_01349 [Alistipes putredinis DSM 17216] Length = 361 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 ++ +R V ++RS +G+ ++A+ +G V YWL GVP + GV+T + ++P G Sbjct: 189 QEFTREVVMIVRSNAIGIPLLAVIQGAVALVGYWLCGVPWALFWGVVTCVATIVPLLGTA 248 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + ++ YL + G+ A L +G + + VD R L L T FG++ G Sbjct: 249 LVWLPLAAYLGLIGHWGAAVGLLAYGVVVITQVDNLARFVLQKRMADTHPLVTIFGVIIG 308 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GPVL+++ Sbjct: 309 LSLFGFMGVIFGPVLLSI 326 >gi|298481866|ref|ZP_07000056.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298272088|gb|EFI13659.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 341 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G I ++ +++ MI L+F G +++++ + Sbjct: 119 LGKDTLTFIVSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGG----KKMEAYVNDIL 174 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P ++ ++ +RS +G+ ++AI +G V Y L G P+ + LG +T + Sbjct: 175 PFNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLTCFATI 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ FNA + +GAI + D +R L L T Sbjct: 235 IPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 IFGVVIGLPLFGFMGVIFGP 314 >gi|322833507|ref|YP_004213534.1| hypothetical protein Rahaq_2804 [Rahnella sp. Y9602] gi|321168708|gb|ADW74407.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 365 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 4/178 (2%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+ +C M++ Y G +++ + L + + IR+ LG+ Sbjct: 164 FIVHC---ALMLLFSALLYSRGENVAMGIRHFAVRLAAERGDAAVILAGQAIRAVALGVV 220 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + AI + ++ G +AG+P L V+ + + G + I+L G+ T Sbjct: 221 VTAIVQSVLGGIGLAIAGIPYATVLTVVMFVCCVAQIGPLLVLIPAIIWLYWSGDNTWGT 280 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +W + + +D LRP L+ LP L G++GG+ G++GLFIGPV++A+ Sbjct: 281 VLLVWSCV-VGSLDNVLRPVLIRMGADLPMLLILSGVIGGLFAFGMIGLFIGPVVLAV 337 >gi|312969715|ref|ZP_07783898.1| UPF0118 inner membrane protein ydiK [Escherichia coli 1827-70] gi|310338000|gb|EFQ03089.1| UPF0118 inner membrane protein ydiK [Escherichia coli 1827-70] Length = 207 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 3/163 (1%) Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 Y G ++Q + L + + IR+ LG+ + A+ + ++ G + Sbjct: 13 LLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAV 72 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +GVP L V+ + ++ G P+ A+ I+L G+ T L +W + + +D Sbjct: 73 SGVPYATLLTVLMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDN 130 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ Sbjct: 131 VIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAV 173 >gi|315231402|ref|YP_004071838.1| hypothetical protein TERMP_01640 [Thermococcus barophilus MP] gi|315184430|gb|ADT84615.1| hypothetical protein TERMP_01640 [Thermococcus barophilus MP] Length = 327 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 18/233 (7%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLSIIFMIIALFFFYR 179 W++ + P L + + F F P+F+ + Y L ++ ++ ++F Sbjct: 96 WSQTFTFPFGLTNVIQKFYA----QFTPKFSEYILSYTFSIPKYLLQLVIFVVMFYYFLV 151 Query: 180 DGFSISQQLDSL----GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYW 234 +I +Q+ L + L K+ + +IR+ L IA G + LG + Sbjct: 152 SSEAIRRQISLLLPQENKELANKLLKRADLTLQALIRAWLL--LNIAKGILMTLGFIVFQ 209 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-I 291 ++ VP+ V G +T + + +P G I + A +IYL GN+ A L ++G + + + Sbjct: 210 VSDVPTAVIAGFLTVLFSFVPLFEGWMI-WLAGAIYLFKNGNVITAILLAVYGFVFVSPL 268 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D T+RP LV +L + G++GG + G+ GL IGP+++ L+ + KE Sbjct: 269 PDFTVRPKLVAKGAQLDEVMVLVGMIGGAWSFGVKGLIIGPIVLNLVVALLKE 321 >gi|118468766|ref|YP_889482.1| hypothetical protein MSMEG_5237 [Mycobacterium smegmatis str. MC2 155] gi|118170053|gb|ABK70949.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 395 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 68/334 (20%), Positives = 135/334 (40%), Gaps = 31/334 (9%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L+ YFL+ FF ++ A + + P+Y + + +S + ++ + + I+P+ Sbjct: 21 LLLGAYFLRTFFVLIVMAAVGAYLFSPLYQRLL--RRFNSGIAVTLTVLAALLMVIIPVS 78 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++++ ++V+ V W++D S + L Sbjct: 79 LIVFLAIVQVSQMVNTV----------SAWVADTDLSTLGDRTLQFINSTADRVPFLDID 128 Query: 140 FLKTNGIDFIPRFASRFGMIFLD------------YCLSIIFM--IIALFFFYRDGFSIS 185 + D I + R G L SIIF+ I+L ++ Sbjct: 129 VTPESLRDAIVTVSQRVGEWLLGVLQGALGGLAGALTASIIFLYVFISLLVNSEKVTTLV 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV-AL 244 +QL+ LGE + Y K + +V ++ F +IA+ +G+ + ++AG + Sbjct: 189 RQLNPLGEEITDLYLAKTAAMVKGTVKGQF----VIALAQGISGAISIYIAGFHNGFFVF 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ +++IP G I I ++ GN + + + + +D LRP LV Sbjct: 245 AILLTALSVIPLGGGIVTIPFGIGMMFFGNTIGGIFIVAFHILVVTNIDNVLRPILVPKA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +L + G+ G GL IGPVLM +I Sbjct: 305 ARLDAALMLLAVFAGIAMFGFFGLVIGPVLMIII 338 >gi|85059408|ref|YP_455110.1| putative inner membrane protein [Sodalis glossinidius str. 'morsitans'] gi|84779928|dbj|BAE74705.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 18/253 (7%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV+ ++ +P WL DIP M +L++ QSL L + +I + Sbjct: 96 LVAWATQPDRLTLPALAWLQDIP--MVGRKLYSAW----QSLISGGSAPLMSKIQPYIGK 149 Query: 152 FAS-------RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 AS G + L L I+F ++ R G ++ LG A Sbjct: 150 AASWLLGQVANLGSLLLHCGLMILFSVLLYLRGERVGMAVRHFAIRLGAERGDAS----V 205 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + IR+ +G+ + AI + ++ G + G+P L V ++ + G Sbjct: 206 LLAAQAIRAVAMGVVLTAIVQSVLGGVGLAITGIPLATVLTVTMFVLCIAQLGPLPVLIP 265 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I+L G+ T L +W + + +D LRP + LP L G++GG+ G Sbjct: 266 AMIWLYWSGDTTWGTILLVWSCV-VATLDNILRPIFIHMGADLPMLLVLCGVLGGLLAFG 324 Query: 325 LLGLFIGPVLMAL 337 ++GLFIGPV++A+ Sbjct: 325 MIGLFIGPVVLAV 337 >gi|261822011|ref|YP_003260117.1| inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606024|gb|ACX88510.1| protein of unknown function UPF0118 [Pectobacterium wasabiae WPP163] Length = 369 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 14/327 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I+ + ++ F A ++ +WP+ F + + ++ T ++ LFI Sbjct: 22 ITIMIIACFWVVQPFILGFAWACMVVIATWPLLIKFQALLWGRRSLAVLVMTFLLILLFI 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--- 132 VP+ L + L+S P WL+ IP + +L+ + QS Sbjct: 82 VPIAVLISSVVDNSSALMSWGARQENFSPPTLEWLTSIP--LVGEKLFNSWQALLQSGGS 139 Query: 133 --LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + F KT ++ A+ G FL +C M+I Y G ++++ + Sbjct: 140 GLFAKVQPYFGKTA--TWLVAQAAHIGR-FLMHC---TLMLIFSALLYYKGEAVAKAVRH 193 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 194 FAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFL 253 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + G + I+L G+ T L +W + + +D +RP L+ LP L Sbjct: 254 CCLAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSCV-VGTIDNVIRPMLIRMGADLPML 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPV++A+ Sbjct: 313 LILSGVIGGLLAFGMIGLFIGPVVLAV 339 >gi|86141183|ref|ZP_01059729.1| hypothetical protein MED217_04177 [Leeuwenhoekiella blandensis MED217] gi|85831742|gb|EAQ50197.1| hypothetical protein MED217_04177 [Leeuwenhoekiella blandensis MED217] Length = 354 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 7/162 (4%) Query: 189 DSLGEHLF---PAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 D L + L+ P + I+RI + +++S LG+ ++A+ +G+V +++ GVP Sbjct: 166 DKLHQSLYAFIPLNKENIARIGHESVAMVKSNALGIPLVALAQGIVALIGFFIFGVPDPF 225 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 VITAI +MIP G + V+I ++ GN A + ++G + + D +R +++ Sbjct: 226 FWFVITAIGSMIPFIGTLLGIVPVTILMIASGNNLQAVGIAIYGLVVVGSTDNLIRLYVL 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L T G++ GV G +GL GP+L++L ++ K Sbjct: 286 ERLANVHPLVTLIGVIVGVPLFGFIGLIFGPLLISLFLLVVK 327 >gi|116753687|ref|YP_842805.1| hypothetical protein Mthe_0372 [Methanosaeta thermophila PT] gi|116665138|gb|ABK14165.1| protein of unknown function UPF0118 [Methanosaeta thermophila PT] Length = 339 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 90/372 (24%), Positives = 152/372 (40%), Gaps = 69/372 (18%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIATV 68 WMI ++L++ + F P++ +I+G + PI F +K S IAT+ Sbjct: 6 NWMIA-VVLIAFIAIAYFMFPLVDGIILGTVFAYIGRPIRDMFGPRKRLGSA----IATI 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + IVP+ + G++E+ W++ PG M A E+ S Sbjct: 61 GI----IVPISLVLILGVMEIANFF--------------MWIAQNPGSM-AREMS----S 97 Query: 129 HPQSLKILSETFLKTNG-----IDFIPRFASRFGMIFLDY-------CLSIIFMIIALFF 176 L+I E + G + F+ A+R M LDY ++II I +F Sbjct: 98 TISGLEIPDEIYTLITGSLQSILSFVADVAAR--MPLLDYGRRVVLLAVNIIVAIPVCYF 155 Query: 177 FYRDG-------FSI--SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 DG F+I + LD+ + AY+ +I RI+ + FLG AI + Sbjct: 156 LLCDGERFVDSWFTIVPEESLDT-----YRAYFNRIDRILSGI----FLGSMYTAIVGSV 206 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + ++ VP A+ + I ++P A VSIY I A F + Sbjct: 207 ISAIVFYAFDVPRPFAMASLVFIAGLVPALTAWAVIVPVSIYRYIHMGPAEALMFFAVAS 266 Query: 287 IELFIVDK-TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW--- 342 +++ + +RP+LV + L +GG G+ G F+ P +M +I I+ Sbjct: 267 ALIYLPSELIVRPYLVAARSSIHPLLVMLSFLGGAMVAGIGGFFLAPAVMGVIVGIYQVR 326 Query: 343 KESIMAIKENKE 354 +E +A KE + Sbjct: 327 REQSLAAKETQN 338 >gi|57238407|ref|YP_179538.1| hypothetical protein CJE1555 [Campylobacter jejuni RM1221] gi|148926718|ref|ZP_01810398.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8486] gi|57167211|gb|AAW35990.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|145845082|gb|EDK22178.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8486] gi|315058837|gb|ADT73166.1| Acid membrane antigen A [Campylobacter jejuni subsp. jejuni S3] Length = 347 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F Y M+E+ + + + L Q V + +P Sbjct: 56 FLASILTTACMVLLFFAP----FVYAMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIAL 174 E K L +S+ L +AS F G FL I ++I + Sbjct: 112 NFLEPKIKEFLASIDLNSISKQIL---------SYASSFTKSGAKFL-----IDMVLICV 157 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+F+ + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 158 FYFFANLY--GTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGL 215 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + Sbjct: 216 ITIFYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFASNNLNSALVIFIYSVIVI 273 Query: 290 -FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 274 SFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|290509047|ref|ZP_06548418.1| inner membrane protein [Klebsiella sp. 1_1_55] gi|289778441|gb|EFD86438.1| inner membrane protein [Klebsiella sp. 1_1_55] Length = 370 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +R+ LG+ + A+ + ++ G ++GVP L V+ ++ G + I+ Sbjct: 209 QAVRAVALGVVVTALTQAVLGGIGLAISGVPYAALLTVVMIFTCLVQLGPLLVLVPSIIW 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D +RP L+ LP + G++GG+ G++GL Sbjct: 269 LYWSGDTTWGTVLLVWSCV-VGTMDNVIRPVLIRMGADLPMILILTGVIGGLIAFGMIGL 327 Query: 329 FIGPVLMAL 337 FIGPVL+A+ Sbjct: 328 FIGPVLLAV 336 >gi|189462559|ref|ZP_03011344.1| hypothetical protein BACCOP_03249 [Bacteroides coprocola DSM 17136] gi|189430720|gb|EDU99704.1| hypothetical protein BACCOP_03249 [Bacteroides coprocola DSM 17136] Length = 338 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 18/223 (8%) Query: 124 TKHLSHP--QSLKILSE----TFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIA 173 T+ + P Q + I+ E L + F+ AS G + D +++ I+ Sbjct: 92 TQAIIQPAHQVIDIIEERTGFDLLSEKSLSFMVVQASSIGQKIMTGVSDLIVNLAVAIML 151 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 +FF +G ++++ + P ++ K+ +RS +G+ ++A+ +G++ Sbjct: 152 MFFMLWEG----RKMEHYVSTIMPFEESNKREVLNKIQLMVRSNAIGIPLLAVIQGIISL 207 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y L P+ ++TA ++IP G + + VSIY LI G NA L +G I + Sbjct: 208 GGYLLCDAPNPYLTALLTAFASIIPLVGTALIWIPVSIYFLIMGEWINALILLGYGGIII 267 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 D +R L + L T FG+V G+ G +G+ GP Sbjct: 268 SQCDNLIRFLLQKKMANIHPLITIFGVVAGLPIFGFMGIIFGP 310 >gi|307131465|ref|YP_003883481.1| putative inner membrane protein [Dickeya dadantii 3937] gi|306528994|gb|ADM98924.1| predicted inner membrane protein [Dickeya dadantii 3937] Length = 367 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 10/156 (6%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + AI + ++ G LAG+P L V+ + + G I+ Sbjct: 212 QAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLTVLMFLSCVAQIGPLTVLIPAIIW 271 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D +RP L+ LP L G++GG+ G++GL Sbjct: 272 LYWSGDTTWGTILLIWSCV-VGTLDNIIRPLLIRMGADLPMLLILSGVIGGLLAFGMIGL 330 Query: 329 FIGPVLMA----LIAVIWKES-----IMAIKENKEK 355 FIGPV++A L++ KES I I + +K Sbjct: 331 FIGPVVLAVSYRLLSAWMKESPEPPPIRTISHHHKK 366 >gi|303243971|ref|ZP_07330310.1| protein of unknown function UPF0118 [Methanothermococcus okinawensis IH1] gi|302485623|gb|EFL48548.1| protein of unknown function UPF0118 [Methanothermococcus okinawensis IH1] Length = 343 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/358 (21%), Positives = 157/358 (43%), Gaps = 38/358 (10%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +M+ ++ + L +Y F + + + PIY K +T A+I ++ Sbjct: 9 LMKIFVLGVFLAIVYMTYPFLDTLALSCAFAYMGKPIYDKL--KPHTGNTLAAIICLLA- 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLAN---QHGIPVPRW------LSDIPGGMWASE 121 FI+P + + Y + E+ + ++ + + Q V R +S I G W + Sbjct: 66 ---FIIPTVIVGYIVLKELLIFLQQINIQSLNLQSMDTVERLNNLLYKVSSIFGYSWQVD 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T Q L L E ++K + MI + + + ++ ++F +DG Sbjct: 123 EQTLSNYISQILSYL-EPYIKNSLAQL---------MILPEIAIKTMIVLFMTYYFLKDG 172 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + + + Y++K + + ++ F+G + +I G++ G Y++ G+ Sbjct: 173 HVVKKAILA---QVPDKYYEKTELFLNNLNESYKNLFIGNALTSIAIGVISGIGYYIIGI 229 Query: 239 PSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKT 295 P+ L VIT + A++P GG + + +SIY L+ G I L L+G I L + D Sbjct: 230 PNAFILAVITGVFALLPIIGGWTV-YIPLSIYYLMTGEIVKGIELLLFGWIFLSTLPDFV 288 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +RP +V + + G T+GL G +GP+++ +W+ + ++E+K Sbjct: 289 IRPLIVKKESDVHPSLILIAFLIGPLTLGLGGFAMGPLIVGAFDALWR---VKLRESK 343 >gi|86149982|ref|ZP_01068210.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152766|ref|ZP_01070971.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596022|ref|ZP_01099259.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|121612486|ref|YP_001001021.1| hypothetical protein CJJ81176_1365 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005924|ref|ZP_02271682.1| hypothetical protein Cjejjejuni_07165 [Campylobacter jejuni subsp. jejuni 81-176] gi|218562972|ref|YP_002344751.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839428|gb|EAQ56689.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|85843651|gb|EAQ60861.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249909|gb|EAQ72868.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|88190863|gb|EAQ94835.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360678|emb|CAL35475.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926583|gb|ADC28935.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni IA3902] gi|315929282|gb|EFV08495.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 347 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 42/296 (14%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F Y M+E+ + + + L Q V + +P Sbjct: 56 FLASILTTTCMVLLFFAP----FVYAMIELAKALKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIAL 174 E K L +S+ L +AS F G FL I ++I + Sbjct: 112 NFLEPKIKEFLASIDLNSISKQIL---------SYASSFTKSGAKFL-----IDMVLICV 157 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+F+ + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 158 FYFFANLY--GTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGL 215 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + Sbjct: 216 ITIFYGYDG-ILMGVIFAVSSLIPAIGGALI-YMPVSLYEFASNNLNSALVIFIYSVIVI 273 Query: 290 -FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 274 SFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|307626825|gb|ADN71129.1| putative inner membrane protein [Escherichia coli UM146] Length = 201 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 3/163 (1%) Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 Y G ++Q + L + + IR+ LG+ + A+ + ++ G + Sbjct: 7 LLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAV 66 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +GVP L V+ + ++ G P+ A+ I+L G+ T L +W + + +D Sbjct: 67 SGVPYATLLTVLMILSCLVQLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDN 124 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ Sbjct: 125 VIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAV 167 >gi|183598849|ref|ZP_02960342.1| hypothetical protein PROSTU_02280 [Providencia stuartii ATCC 25827] gi|188021055|gb|EDU59095.1| hypothetical protein PROSTU_02280 [Providencia stuartii ATCC 25827] Length = 371 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 16/314 (5%) Query: 34 VLSALIIGF--------TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 VL+ I+GF +WP+ ++ A++ ++ LF++PL L Sbjct: 30 VLNPFILGFVWAGMMVIATWPLLLRLEARLWNKRWLAALVMVSLILLLFVIPLGILIGSI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHL-SHPQSLKILSETFLKT 143 + L+ N +P WL+ +P G W + S +L + +L Sbjct: 90 IQNSTPLIELAKSPNSLRLPDLEWLNSVPFVGEKIYYAWHSLVASGGNALLAKVQPYLGQ 149 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 F+ + A G L ++F Y G S+ + L Sbjct: 150 AAGWFLAQ-AINAGRFMFHLALMLLFS----GLLYLKGESVMLGIRHFAVRLAGIRGDAA 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + IR+ LG+ + A+ + +V G L+G+ L V+ I + G + Sbjct: 205 VVLAAQSIRAVALGVVVTALIQAIVGGVGLALSGISYAAILTVLLFICCVAQLGPLLIMV 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I+L G+ A L +W A+ + +D LRP+L+ LP + G++GG+ + Sbjct: 265 PSVIWLFWTGDTTWAIILAVWAAV-VATMDGVLRPWLIKMGADLPMVLILVGVIGGILSF 323 Query: 324 GLLGLFIGPVLMAL 337 G++GLFIGPV++A+ Sbjct: 324 GMIGLFIGPVVLAV 337 >gi|242279199|ref|YP_002991328.1| hypothetical protein Desal_1727 [Desulfovibrio salexigens DSM 2638] gi|242122093|gb|ACS79789.1| protein of unknown function UPF0118 [Desulfovibrio salexigens DSM 2638] Length = 365 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 KV +S G IA +G+V G +AG+P+ + G + + ++IP G + + +I Sbjct: 217 KVSKSVLFGSLFIAFLQGIVGGIGLAIAGIPA-LFWGTMMSFASLIPVLGTGLIWVPATI 275 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YLLI G + A L +W + + +D LRP +V ++ + F ++GG+ G LG Sbjct: 276 YLLIVGKLKIAVFLLIWCGVLVTGIDTVLRPMIVREASRVSTIYVFLAILGGINAFGPLG 335 Query: 328 LFIGPVLMALIAVI 341 + GP++++ + V+ Sbjct: 336 ILYGPLILSFLMVM 349 >gi|206576471|ref|YP_002237996.1| inner membrane protein YdiK [Klebsiella pneumoniae 342] gi|288934905|ref|YP_003438964.1| hypothetical protein Kvar_2032 [Klebsiella variicola At-22] gi|206565529|gb|ACI07305.1| inner membrane protein YdiK [Klebsiella pneumoniae 342] gi|288889614|gb|ADC57932.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] Length = 370 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +R+ LG+ + A+ + ++ G ++GVP L V+ ++ G + I+ Sbjct: 209 QAVRAVALGVVVTALTQAVLGGIGLAISGVPYAALLTVVMIFTCLVQLGPLLVLVPSIIW 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D +RP L+ LP + G++GG+ G++GL Sbjct: 269 LYWSGDTTWGTVLLVWSCV-VGTMDNVIRPVLIRMGADLPMILILTGVIGGLIAFGMIGL 327 Query: 329 FIGPVLMAL 337 FIGPVL+A+ Sbjct: 328 FIGPVLLAV 336 >gi|251789301|ref|YP_003004022.1| putative inner membrane protein [Dickeya zeae Ech1591] gi|247537922|gb|ACT06543.1| protein of unknown function UPF0118 [Dickeya zeae Ech1591] Length = 370 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + AI + ++ G LAG+P L V+ + + G I+ Sbjct: 211 QAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLTVLMFLSCVAQLGPLTVLIPAIIW 270 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D +RP L+ LP L G++GG+ G++GL Sbjct: 271 LYWSGDTTWGTILLIWSCV-VGTLDNIIRPLLIRMGADLPMLLILSGVIGGLLAFGMIGL 329 Query: 329 FIGPVLMAL 337 FIGPV++A+ Sbjct: 330 FIGPVVLAV 338 >gi|310819626|ref|YP_003951984.1| hypothetical protein STAUR_2353 [Stigmatella aurantiaca DW4/3-1] gi|309392698|gb|ADO70157.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 363 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLG--------EHLFPAYWKKISRIVPKVIRS 213 + M+IA FFF DG + + ++S+ E L I+ +V V+ + Sbjct: 161 SFAFQTTMMLIAFFFFLVDGKRLVEWIESVAPLKQGQTIEILLEFRHVSIAVLVSSVVTA 220 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLI 271 G+ +A G Y + VP +T +A+IP G A + F A ++ LLI Sbjct: 221 ---GVQAVAALVG------YLITQVPVPFFFAAVTFFLALIPAIGAAVVCFVA-ALLLLI 270 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ + A L +WG + + +VD ++P L + + FF L+GG+ + G +GL +G Sbjct: 271 TGHPWAALFLAIWGVVVVGLVDNIVKPLLAKRGMDMHGAIIFFALLGGLASFGTVGLLLG 330 Query: 332 PVLMA 336 P+++A Sbjct: 331 PLIVA 335 >gi|29346881|ref|NP_810384.1| hypothetical protein BT_1471 [Bacteroides thetaiotaomicron VPI-5482] gi|29338779|gb|AAO76578.1| putative transmembrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 341 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 14/201 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G I ++ +++ M+ L+F G +++++ + Sbjct: 119 LGKDTLSFIVSILPRIGQIIMESISSLAINLFVMVFVLYFMLIGG----KKMEAYVNDIL 174 Query: 197 P---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P A +++ + ++RS +G+ ++AI +G V Y + G P+ + LG +T + Sbjct: 175 PFNEANTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNVLVLGFLTCFATI 234 Query: 254 IP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G A I F V+ YL + G+ FNA L +G I + D +R L L Sbjct: 235 IPMVGTALIWF-PVAAYLAVTGDWFNAIGLAAYGGIVISQSDNLIRFILQKKMADTHPLI 293 Query: 312 TFFGLVGGVRTMGLLGLFIGP 332 T FG+V G+ G +G+ GP Sbjct: 294 TIFGVVIGLPLFGFMGVIFGP 314 >gi|323962179|gb|EGB57774.1| ydiK protein [Escherichia coli H489] Length = 370 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/324 (21%), Positives = 147/324 (45%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L+ ++ F A + +WP+ + ++ T+ ++ +FI+P+ Sbjct: 23 MIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKIL 136 L +++ + K + + +P WL+ IP + ++L+ +L I+ Sbjct: 83 -ALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIM 139 Query: 137 SET--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ ++ T F+ + A+ G F+ +C M++ Y G ++ + Sbjct: 140 AKVRPYIGTTTTWFVGQ-AAHIGR-FMVHC---ALMLLFSALLYWRGEQVALGIRHFATR 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ Sbjct: 195 LAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLV 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + Sbjct: 255 QLGPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G++GG+ G++GLFIGPVL+A+ Sbjct: 313 SGVIGGLIAFGMIGLFIGPVLLAV 336 >gi|152970708|ref|YP_001335817.1| putative inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895213|ref|YP_002919948.1| putative inner membrane protein [Klebsiella pneumoniae NTUH-K2044] gi|329999400|ref|ZP_08303408.1| hypothetical protein HMPREF9538_01066 [Klebsiella sp. MS 92-3] gi|150955557|gb|ABR77587.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547530|dbj|BAH63881.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538324|gb|EGF64461.1| hypothetical protein HMPREF9538_01066 [Klebsiella sp. MS 92-3] Length = 370 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +R+ LG+ + A+ + ++ G ++GVP L V+ ++ G + I+ Sbjct: 209 QAVRAVALGVVVTALTQAVLGGIGLAVSGVPYAALLTVVMIFTCLVQLGPLLVLVPSIIW 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D +RP L+ LP + G++GG+ G++GL Sbjct: 269 LYWSGDTTWGTVLLVWSCV-VGTMDNVIRPVLIRMGADLPMILILTGVIGGLIAFGMIGL 327 Query: 329 FIGPVLMAL 337 FIGPVL+A+ Sbjct: 328 FIGPVLLAV 336 >gi|298209214|ref|YP_003717393.1| putative transmembrane protein [Croceibacter atlanticus HTCC2559] gi|83849141|gb|EAP87010.1| putative transmembrane protein [Croceibacter atlanticus HTCC2559] Length = 339 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 3/175 (1%) Query: 185 SQQLDSLGEHLFPAYWKKI--SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SQ ++L E++ + I + ++R+ +G+ ++AI +G++ + + GVP Sbjct: 165 SQLREALDEYIPIGHDNLILIGKESSDLVRANAIGIPLVAICQGIIALIGFLIFGVPDPF 224 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 VIT I +MIP G I V+I L +G + A +F++G + + D +R +++ Sbjct: 225 FWFVITTIGSMIPFIGTAIGIIPVTILLYAQGMHWQAIAIFIYGMVVVGATDNFIRLYML 284 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L T FG+V GV G +GL GP+L++L +I K +N+ ++ Sbjct: 285 QKLSNVHPLITLFGVVVGVPLFGFIGLIFGPLLISLFLLIVKIYKNEYGKNEARL 339 >gi|329957164|ref|ZP_08297731.1| hypothetical protein HMPREF9445_02607 [Bacteroides clarus YIT 12056] gi|328523432|gb|EGF50531.1| hypothetical protein HMPREF9445_02607 [Bacteroides clarus YIT 12056] Length = 336 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 92/191 (48%), Gaps = 8/191 (4%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKK 202 I +PR + +++ ++ L+F G ++++ L P A + Sbjct: 128 ISSLPRIGQTLMGGISSFAVNMFVLVFVLYFMLMGG----KKMERYVNELLPFNEANTQD 183 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + + ++RS +G+ ++AI +G V YW+ G P+ + G +T +++P G + Sbjct: 184 VVHEINMIVRSNAIGIPLLAIIQGGVAMIGYWIFGAPNILFSGFLTGFASVVPMVGTALI 243 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++IY+ + GN F A L ++GA+ + +D +R + + L T FG+V G+ Sbjct: 244 WVPIAIYMALIGNWFQAIGLAIFGALVISQLDNLIRFIIQKKMADIHPLITIFGVVIGLS 303 Query: 322 TMGLLGLFIGP 332 G +G+ GP Sbjct: 304 LFGFMGVIFGP 314 >gi|312137386|ref|YP_004004723.1| hypothetical protein Mfer_1175 [Methanothermus fervidus DSM 2088] gi|311225105|gb|ADP77961.1| protein of unknown function UPF0118 [Methanothermus fervidus DSM 2088] Length = 325 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 4/176 (2%) Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I++ F+ RDG + Q + S+ + K+ R + IR+ F G + A+ G+ Sbjct: 146 IMSTFYLARDGTKLIQYIRSILPKNKVKLFNKMLREIEVTIRAIFYGHFLAALIVGIFAT 205 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 AY++ G P LGVIT +IP G P+ + ++ IY +I GN+ + ++G Sbjct: 206 MAYYILGYPFPAILGVITMFTTVIPVIGPWPV-YLSLGIYDIIHGNVIRGVAIIVFGK-S 263 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L +D LR L G ++ + G +GG G+ G +GP+++ I K Sbjct: 264 LGFLDVYLRTELGGKYAEIHPMLFLVGFIGGPMIWGIAGFILGPLILCTTHTIIKT 319 >gi|254877432|ref|ZP_05250142.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843453|gb|EET21867.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 339 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 34/292 (11%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + S+FL V+ + +C+FI P+L + YY + E+ + +Q + + IP Sbjct: 53 KHRSSFLLVMGIL--LCVFI-PILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIP- 108 Query: 116 GMWASELWTKHLSH-PQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMII 172 + + +HL +++ S+T + G +P R+ + F+ L I Sbjct: 109 --YIGSILQEHLDKLIKAINDDSDTIISNLG-QILPKVRYVGSTSISFITDFL------I 159 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVL 229 L Y+ S S L+ + + + + I R L + + A G V+ Sbjct: 160 TLLLVYQFLVS-SSTLEKFAKKVVLKDFDDSDSFISTAIITTRRVSLAIFLTASLVGTVM 218 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF------NATCLFL 283 + L G+P+ + L AI +MIP F +Y+LI ++F A + + Sbjct: 219 AITFLLTGMPTPILLAFTVAIASMIP------FMVGIVYILIGASVFVVYGATKAIIILV 272 Query: 284 WG-AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 G A+ +F D ++P ++ ++L F + G++GG++ G +G+F+GPV+ Sbjct: 273 VGFALNIF-TDNIMQPKIINKQVQLSFAASLIGILGGIQAFGFIGIFLGPVI 323 >gi|157370415|ref|YP_001478404.1| hypothetical protein Spro_2175 [Serratia proteamaculans 568] gi|157322179|gb|ABV41276.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 366 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + ++ G + G+P+ L V+ I + G + I+ Sbjct: 210 QAIRAVALGVVVTALVQSVLGGIGLAVTGIPAATLLTVLIFICCVAQLGPLLVLVPAIIW 269 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D LRP L+ LP + G++GG+ G++GL Sbjct: 270 LYWSGDTTWGTVLLVWSCV-VATLDNVLRPVLIRMGADLPMILILSGVIGGLLAFGMIGL 328 Query: 329 FIGPVLMAL 337 FIGPV++A+ Sbjct: 329 FIGPVVLAV 337 >gi|53802621|ref|YP_112659.1| hypothetical protein MCA0120 [Methylococcus capsulatus str. Bath] gi|53756382|gb|AAU90673.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 370 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/325 (21%), Positives = 147/325 (45%), Gaps = 7/325 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I F+++ K F +L ++I+ P+++S + + A + ++++ Sbjct: 19 LIGFLVIYCYQIFKPFIGLMLWSVILAVAFHPMHASLARRMGDKQGRAATVLVLAILLCV 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPG-GMWASELWTKHLSHPQS 132 +VP L +LV +V + +P PR ++++ P G LW+ S Sbjct: 79 LVPTALLAVSFADSATDLVRQVRDGSLK-VPAPRAFVAEWPLLGDKLYALWSAAHEDIGS 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + E ++T + + +A+ G L + +S++ + + + G + ++ + + Sbjct: 138 VAARFEPKIRTVTKEILG-YAASAGSAVLKFMVSLVLAGVWMAY-ASSGHAAARAIAN-- 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P + R+ IR+ G+ IA + L+LG+ + L GVP+ L ++ ++ Sbjct: 194 RMAGPGQGDALVRLSTTTIRAVAQGVIGIACIQALLLGAGFILVGVPAAGVLALLVLLLG 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + IY+ + + +F I VD L+PF++G + P Sbjct: 254 IMQVPALLISLPTVIYVFMTDDSTIVAIMFAIYTIVAGSVDNILKPFMLGRGVDAPMPVI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ T G++GLF+G V++AL Sbjct: 314 LLGALGGMATGGIIGLFLGSVMLAL 338 >gi|296169971|ref|ZP_06851578.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895375|gb|EFG75081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 381 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 51/361 (14%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E LN + + + +L + YFL+G+F ++ A + + P+++ F T L Sbjct: 4 EFTLNQKRALAILTAIALLFAAYFLRGYFVLIVVAAVGAYLFTPLFNWF---GRRLGTGL 60 Query: 63 AVIATVSVMC---LFIVPLLFLFYYGMLEMKELVSKVV----------LANQHGIPVPRW 109 A AT +++C + IVP+ L ++++ +V + L ++ V Sbjct: 61 A--ATCTLLCALVIVIVPVTLLVILAIVQISRMVDSITEWVKSTDLSGLGDRTLHAVNEL 118 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL---- 165 LS +P +H + I ++ K + + R + + FL + Sbjct: 119 LSRVP------------FAH---MTITTDNLRKA--MVTVGRNVGEWALHFLQGAVGGLA 161 Query: 166 -----SIIFM--IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +IIF+ +AL + L+ LG+ + Y K +V R T G Sbjct: 162 GAITSAIIFLYVFVALLVHRERVRKLIADLNPLGDEVTDLYLAKAGAMV----RGTVNGQ 217 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 +IA+ +G+ ++ ++AG + V+ +++IP G I I ++ GNI Sbjct: 218 FVIALCQGVAGAASIYVAGFHHGFFIFAVLLTALSIIPLGGGIVTIPFGIGMIFYGNIAG 277 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + LW + + +D LRP LV +L + G+ G G+ IGPVLM L Sbjct: 278 GAFVVLWHLVVVTNIDNFLRPILVPRDARLNPALMLLSVFSGIAMFGPWGIVIGPVLMIL 337 Query: 338 I 338 I Sbjct: 338 I 338 >gi|168699365|ref|ZP_02731642.1| hypothetical protein GobsU_07587 [Gemmata obscuriglobus UQM 2246] Length = 384 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/318 (21%), Positives = 135/318 (42%), Gaps = 23/318 (7%) Query: 31 FAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P L+ + + +WP+ SS++ + + T AV+A+ V+ L VP Y Sbjct: 58 FLPALTWGVALAIIAWPL-SSWLRRVTANRTCAAVVASAVVILLVAVPS---GYVAQQVA 113 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +E+ S A Q + + M A+ + ++ + ++ E K +++ Sbjct: 114 REVSSSTEQAQQEAVQ-----GTLRERMLATPVLRDAVAWAERPEVNLEAEAKKAAREYL 168 Query: 150 PR--FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + +R + FL L + I L++ RDG Q L P ++ R+ Sbjct: 169 GNGMWLARGSVAFL---LQLAIAIYILYYSLRDG----DQFLRAARRLLPVTPEEADRVF 221 Query: 208 PKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + + + G+ +W G+P+ + GV+ +++M+P G + + Sbjct: 222 DRAGGSVHANLYASLVTSAINGVNAALLFWATGLPAPILWGVVVFVVSMLPVAGIFLIWV 281 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + YL + + A L WG +VD L +L GG ++L +P +GG+ Sbjct: 282 PAAAYLALTDHWGGAVALVAWGVGSSVLVDTLLYTWLAGGRMRLHPVPALLSFIGGLALF 341 Query: 324 GLLGLFIGPVLMALIAVI 341 G G+ +GP ++A+ + Sbjct: 342 GASGIVLGPAILAVTVAV 359 >gi|126658239|ref|ZP_01729389.1| hypothetical protein CY0110_12607 [Cyanothece sp. CCY0110] gi|126620388|gb|EAZ91107.1| hypothetical protein CY0110_12607 [Cyanothece sp. CCY0110] Length = 378 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/314 (20%), Positives = 141/314 (44%), Gaps = 9/314 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F +L +I+ +P++ ++ V+ + + + + P+ F+ Sbjct: 45 LIRPFLGILLWGIILAIAVFPVFVWLKNRLGGRRKLAGVLLILLGIAVIVGPVSFVATLF 104 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTN 144 + + +V N P P + ++P G + +WT ++ S+ + L+ Sbjct: 105 VGNAQTFADNIVSGNLKVPPPPEGIENLPIIGNYVDHIWTSASNNLISVLSKFQPQLEEL 164 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + FA ++ L + LSII I + +++++ + + P + Sbjct: 165 AKNVL-FFAGNMSLVLLKFILSIIVAGI----LTINSKQLNRKIKRVFIRITPQQGEDFL 219 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 ++ IR G+ +++ + L++G +AG+P L V++ ++ ++ G P+ F Sbjct: 220 QLATATIRGVTRGIIGVSLIQSLLVGIGLMVAGMPLSGLLTVLSLVLCILQIGLGPVVFP 279 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ I+ A L +W I ++D L+P + + +P L F G++GG Sbjct: 280 SI-IFAWYTMGTLKALLLTIW-LIFCTLIDNILKPIFMSQGVSVPILIIFIGVLGGSLLH 337 Query: 324 GLLGLFIGPVLMAL 337 G+LGLFIGPV+++L Sbjct: 338 GILGLFIGPVVLSL 351 >gi|241668900|ref|ZP_04756478.1| hypothetical protein FphipA2_09034 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 320 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 34/292 (11%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + S+FL V+ + +C+FI P+L + YY + E+ + +Q + + IP Sbjct: 34 KHRSSFLLVMGIL--LCVFI-PILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIP- 89 Query: 116 GMWASELWTKHLSH-PQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMII 172 + + +HL +++ S+T + G +P R+ + F+ L I Sbjct: 90 --YIGSILQEHLDKLIKAINDDSDTIISNLG-QILPKVRYVGSTSISFITDFL------I 140 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVL 229 L Y+ S S L+ + + + + I R L + + A G V+ Sbjct: 141 TLLLVYQFLVS-SSTLEKFAKKVVLKDFDDSDSFISTAIITTRRVSLAIFLTASLVGTVM 199 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF------NATCLFL 283 + L G+P+ + L AI +MIP F +Y+LI ++F A + + Sbjct: 200 AITFLLTGMPTPILLAFTVAIASMIP------FMVGIVYILIGASVFVVYGATKAIIILV 253 Query: 284 WG-AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 G A+ +F D ++P ++ ++L F + G++GG++ G +G+F+GPV+ Sbjct: 254 VGFALNIF-TDNIMQPKIINKQVQLSFAASLIGILGGIQAFGFIGIFLGPVI 304 >gi|332176654|gb|AEE12344.1| protein of unknown function UPF0118 [Porphyromonas asaccharolytica DSM 20707] Length = 429 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 35/237 (14%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGM---------IFLDYCLSII----------- 168 P+SL +L+ T D + + RFG+ + S++ Sbjct: 133 DPESLNVLT-----TQAQDVVKQVEERFGIELWSNENIQKLTSFSTSLVKGLLQGMSSFF 187 Query: 169 ---FMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIA 222 F+I+ L +F G+ Q ++ E L P K +S +++S +G+ ++A Sbjct: 188 LNAFIILFLLYFMLRGYD---QFEAAVEELLPFTECNKKTVSNETISIVKSNAIGIPLLA 244 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 I +G+ Y + GV + + V+T +IP G + + +++ + I G+ NA L Sbjct: 245 IVQGVFAYIGYLIFGVDNALLFAVLTTFTTIIPVLGTMLVWIPIAVVMGINGDWLNAILL 304 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L+G I + VD R L + L T FG+ G+ G G+ GP++++LI Sbjct: 305 ALYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFWGVIFGPLILSLI 361 >gi|253572345|ref|ZP_04849748.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838120|gb|EES66208.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 235 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 14/210 (6%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQ 187 S K L + + FI R G I ++ +++ M+ L+F G ++ Sbjct: 4 SKKKRGNDVLGKDTLSFIVSILPRIGQIIMESISSLAINLFVMVFVLYFMLIGG----KK 59 Query: 188 LDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ + P A +++ + ++RS +G+ ++AI +G V Y + G P+ + L Sbjct: 60 MEAYVNDILPFNEANTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNILVL 119 Query: 245 GVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G +T +IP G A I F V+ YL + G+ FNA L +G I + D +R L Sbjct: 120 GFLTCFATIIPMVGTALIWF-PVAAYLAVTGDWFNAIGLAAYGGIVISQSDNLIRFILQK 178 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L T FG+V G+ G +G+ GP Sbjct: 179 KMADTHPLITIFGVVIGLPLFGFMGVIFGP 208 >gi|58039782|ref|YP_191746.1| putative permease [Gluconobacter oxydans 621H] gi|58002196|gb|AAW61090.1| Putative permease [Gluconobacter oxydans 621H] Length = 365 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/350 (22%), Positives = 163/350 (46%), Gaps = 23/350 (6%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIY---SSFISKKEESSTFLAVIATVSVMCLFI 75 I++ +++ LK F + A+ I T+WP+ +F+ + L ++ M +FI Sbjct: 25 IVISAIWILKPFLPATIWAVTIAVTTWPMLRRLQTFVGNSRRVAVSLTILIA---MLVFI 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTK--HLSHPQ 131 +PL ++++ V ++ IP P W+ +P G + W + H+ P+ Sbjct: 82 LPLWLAITTVSSHFGDIIALVSSSSTLHIPDEPPWMGRLPLVGPHIAPFWDRMQHMQFPE 141 Query: 132 SLKIL---SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + ET + T F+ +A F ++ L + L+++ + + L +++ Sbjct: 142 MVRQVIPAPETLIHT----FL-AYAGSFSILALQFILTLVILGV-LLMRAESAIAVA--- 192 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D+L L K++ ++ IR G+T+ A+ E V G LAG P L +T Sbjct: 193 DTLVTILAGNRGKEMLQLAAYTIRGVAFGVTVTAVVESAVAGIGLKLAGAPWVSILTAVT 252 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ ++ G ++ I++ + A L + I I+D LRPFL+ +P Sbjct: 253 FMVCLLQAGPGVTLIPAVIWVYFDRGLAPAALLLV-VTIITIIIDNVLRPFLIRKQADIP 311 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++GG+ +GL+G+FIGP+++++ + K I ++ +S+ Sbjct: 312 LILIMLGVIGGLGGLGLVGIFIGPLILSVAYTLTKSWISDSRQTPPSVST 361 >gi|157145970|ref|YP_001453289.1| putative inner membrane protein [Citrobacter koseri ATCC BAA-895] gi|157083175|gb|ABV12853.1| hypothetical protein CKO_01723 [Citrobacter koseri ATCC BAA-895] Length = 370 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 3/130 (2%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I Sbjct: 209 QAIRAVALGVVVTALVQAILGGIGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAI-I 267 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L G+ T L +W + + +D +RP L+ LP + G++GG+ G++G Sbjct: 268 WLYWTGDTTWGTVLLVWSCV-VGTLDNVIRPVLIRMGADLPLILILSGVIGGLIAFGMIG 326 Query: 328 LFIGPVLMAL 337 LFIGPVL+A+ Sbjct: 327 LFIGPVLLAV 336 >gi|330903708|gb|EGH34280.1| hypothetical protein PSYJA_37244 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 115 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 54/94 (57%) Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 5 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISR 64 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 LP + G+ GG+ G +GLFIGP L+A+ Sbjct: 65 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAV 98 >gi|326798185|ref|YP_004316004.1| hypothetical protein Sph21_0757 [Sphingobacterium sp. 21] gi|326548949|gb|ADZ77334.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 347 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/345 (23%), Positives = 150/345 (43%), Gaps = 33/345 (9%) Query: 24 LYFLKGFFAPVLSALIIG--FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 LY L+G F +L+ +I+ F S +Y + K +S + AV+ ++ + + P Sbjct: 27 LYSLRGIFGALLATMIMYTIFRSLNLYLTEQLKWRKSIS--AVLIIIASFFIIVFP---- 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 +YG++ M + +V+ +H + R + +I + L P L Sbjct: 81 -FYGLINM--IAKRVIELTKHPDKIQRVIDEI------NRFLGDKLQQPD---------L 122 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 TN + +A L +I+ I ++F F ++ + P + Sbjct: 123 ITNNLQRGVAYAGNLMTSILSGAANILLDISVMYFLLYFLFVGCREFEKGVLRYSPFSDE 182 Query: 202 KISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 R + + S LG +IA+ +G + YW+ + GVI I++ IP G Sbjct: 183 NAIRFGVELRNITYSNVLGQGLIAVIQGGAVAFGYWMFDFADPLFWGVICVILSFIPVVG 242 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 AP+ F I I G+ FNA + LWG + + +D LR + + + T G++ Sbjct: 243 APMVFIPACIIKFIDGDTFNAIAMLLWGILLVSNIDNVLRLVIAKRVGDIHPIITIVGVI 302 Query: 318 GGVRTMGLLGLFIGPVLMA--LIAV-IWKESIMAIKENKEKISSN 359 G+ G++GL GP+L++ LI V I++ + +A ++K + N Sbjct: 303 IGIPMFGIMGLVFGPLLLSYFLITVKIYETNKLAEMRLRKKNNDN 347 >gi|261343992|ref|ZP_05971637.1| putative membrane protein [Providencia rustigianii DSM 4541] gi|282568383|gb|EFB73918.1| putative membrane protein [Providencia rustigianii DSM 4541] Length = 371 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + +V G L+G+ L V+ I + G + ++ Sbjct: 210 QSIRAVALGVVVTALVQAIVGGIGLALSGISYAAILTVLIFICCVAQIGPLLVMIPSVLW 269 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ A L +W AI + +D LRP+L+ LP + G++GG+ + G++GL Sbjct: 270 LFWTGDTTWAIILGVWAAI-VATMDGVLRPWLIKMGADLPMVLILIGVIGGILSFGMIGL 328 Query: 329 FIGPVLMAL 337 FIGPV++A+ Sbjct: 329 FIGPVVLAV 337 >gi|300709901|ref|YP_003735715.1| hypothetical protein HacjB3_02650 [Halalkalicoccus jeotgali B3] gi|299123584|gb|ADJ13923.1| hypothetical protein HacjB3_02650 [Halalkalicoccus jeotgali B3] Length = 381 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 93/177 (52%), Gaps = 9/177 (5%) Query: 164 CLSIIFMIIALFFFYRDGFSIS---QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 +S+ + +F RDG + Q + + + + + ++ R+ + ++ +G I Sbjct: 191 AISLTVTMFVVFGLLRDGDRLVAWFQTIVPISDEVKTELFGRLDRL----MWASVIGNVI 246 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 ++ + ++LG +W+ VP + L V+T ++A++P G ++ V+IYLLI G A Sbjct: 247 VSAIQAILLGIGFWVLEVPGAIFLTVVTFLLALLPLIGVFGTWIPVAIYLLIVGRPLAAL 306 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + +G I + + D +RP ++G +L G+ GG+ +G +GLF+GPV++ Sbjct: 307 LMVGYG-ILVSLSDTYIRPAVIGKSGELSSAVIVVGIFGGIAVLGPIGLFVGPVILG 362 >gi|293372558|ref|ZP_06618940.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292632367|gb|EFF50963.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 176 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T +IP G Sbjct: 17 QEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLTCFATIIPMVGTA 76 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+ YL I G+ FNA LF +GAI + D +R L L T FG+V G Sbjct: 77 LVWFPVAAYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADTHPLITIFGVVIG 136 Query: 320 VRTMGLLGLFIGP 332 + G +G+ GP Sbjct: 137 LPIFGFMGVIFGP 149 >gi|253688831|ref|YP_003018021.1| hypothetical protein PC1_2454 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755409|gb|ACT13485.1| protein of unknown function UPF0118 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 395 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 32/358 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ LFI Sbjct: 48 ITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVIVMTLLLILLFI 107 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VP+ L + L+S P WL+ IP + +L+ Sbjct: 108 VPIGVLVSSVVDNSSALMSWGARQENFSPPTLEWLTSIP--LVGEKLFNSW--------- 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMI-------------FLDYCLSIIFMIIALFFFYRDGF 182 + L++ G + FG FL +C S++ + AL ++ G Sbjct: 157 --QALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGRFLMHC-SLMLIFSALLYY--KGE 211 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++++ + L + + IR+ LG+ + AI + ++ G L+G+P Sbjct: 212 AVAKAVRHFAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTT 271 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ + + G P+ A+ I+L G+ T L +W + + +D +RP L+ Sbjct: 272 LLTVLMFLCCLAQLGPLPVLIPAI-IWLYWTGDNTWGTILLVWSCV-VGTIDNIIRPVLI 329 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 330 RMGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 387 >gi|237749317|ref|ZP_04579797.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380679|gb|EEO30770.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 375 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 5/183 (2%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+F RD I + + L + ++V IR+T G ++ +G + G + Sbjct: 180 LFYFLRDRNEILRTVRRFSP-LCGRETNGLFKVVNDTIRATVFGTLAVSAVKGFLSGFMF 238 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 W+ G+P+ + G I I+++IP G+ I + ++YL + G A L +WG + +V Sbjct: 239 WVLGLPAPLLWGSIMGILSIIPLLGSYIIWIPAAVYLALDGYWAQALVLVIWGIVVGGVV 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM---ALIAVIWKESIMAI 349 + L P LV +KL + F L GG+ G G+ +GP+ + A + +W+ Sbjct: 299 NNVLYPILVSKKLKLHTIVAFIALAGGILVYGASGVILGPITLTASAFLLHLWRLKATGY 358 Query: 350 KEN 352 K + Sbjct: 359 KRD 361 >gi|150400877|ref|YP_001324643.1| hypothetical protein Maeo_0445 [Methanococcus aeolicus Nankai-3] gi|150013580|gb|ABR56031.1| protein of unknown function UPF0118 [Methanococcus aeolicus Nankai-3] Length = 393 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 95/371 (25%), Positives = 172/371 (46%), Gaps = 56/371 (15%) Query: 17 MFIILVSLYFLKGFFAPVLSALII----GFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +F+ LVSL + F P L L + + S P+Y K S + S+MC Sbjct: 12 LFVSLVSLSLIYTVF-PYLDVLALSCALAYMSKPVYDKLKPKFGSSIS--------SMMC 62 Query: 73 LF--IVPLL---FLFYYGMLEMKELVS--KVVLANQHGIPVPRW----LSDIPGGMWASE 121 L IVP++ F+ Y +LE + ++ ++ + N + I + + LS+I G + Sbjct: 63 LLFVIVPMVIIGFIILYQILEFLQFLNLNQLDIQNLNLISLINYKLNYLSNILGYNIPIK 122 Query: 122 LWTKHLSHPQSLKILS--ETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L + LS SL ILS E + T +G+ +P A + +I + F+F Sbjct: 123 LEEEKLSQYISL-ILSYLEPHISTAVSGLLLLPEIA-----------IKLIMGVFITFYF 170 Query: 178 YRDGFSISQ-QLDSLGEHLFPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSA 232 +DG+ I LD++ P ++ +++ K + + F G + ++ ++ Sbjct: 171 LKDGYHIKNIVLDNI-----PTEYQLKTQLYLKYLNESYQNLFTGTALTSVAIVIISFIG 225 Query: 233 YWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y++ GV + + L V+T I A++P GG + + +S+Y LI G+ A +F++G + L Sbjct: 226 YFIFGVQNALLLSVLTGIFALLPIVGGWGV-YIPLSLYYLIIGDFVTAIGIFIFGWVFLS 284 Query: 291 IV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMA 348 + D +RP +V + + + T+G+ G IGP+L ++K +S + Sbjct: 285 LAPDFVIRPHIVKKESDVHPVVVLLAFLVAPLTLGIAGFAIGPILFGAFDALFKVKSKIK 344 Query: 349 IKENKEKISSN 359 EN EKI N Sbjct: 345 YVEN-EKIKEN 354 >gi|294496066|ref|YP_003542559.1| hypothetical protein Mmah_1416 [Methanohalophilus mahii DSM 5219] gi|292667065|gb|ADE36914.1| protein of unknown function UPF0118 [Methanohalophilus mahii DSM 5219] Length = 340 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 95/184 (51%), Gaps = 9/184 (4%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIA 222 +I + I +F Y + +++L+ + ++ P + ++ + + ST LG+ IA Sbjct: 151 QLIGLAIMVFLLYYLLSTDNKKLEEMALNILPFSTENKLHLLNEMRNITYSTILGILFIA 210 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 + +G VL + L G+ + G IT I+++IP G P+ + ++Y +I+G+ T + Sbjct: 211 LFQGGVLTITFLLLGIEGALLWGFITLILSIIPFIGPPLVWGPATVYKIIEGDFIAGTII 270 Query: 282 FLWGAIELFI--VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 F+ G +FI D LRP++ + L + GL G+ G +GL +GPVL++ Sbjct: 271 FVAG---MFISNFDYVLRPYIQEKFAAIHPLISLLGLFIGIYLFGAIGLVVGPVLLSCFI 327 Query: 340 VIWK 343 ++ K Sbjct: 328 LMLK 331 >gi|91774322|ref|YP_567014.1| hypothetical protein Mbur_2413 [Methanococcoides burtonii DSM 6242] gi|91713337|gb|ABE53264.1| protein of unknown function UPF0118 [Methanococcoides burtonii DSM 6242] Length = 345 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/318 (20%), Positives = 143/318 (44%), Gaps = 27/318 (8%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y L + L A I+ P+Y + + A++ + M L ++P+ ++F Sbjct: 25 YALLPYINAFLGAFILYVIFKPVYILLTERLKLKENISAILVMILSMILVVLPIYYMFTL 84 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE--TFLK 142 + E++ +++ ++ N + + + + + +E+ + + ++S ++L Sbjct: 85 IIGEIEMVITNII-TNLSYVDITNYFDIVKNIDYINEIAPDIDIQGKIVTLISTLGSYLS 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF-FYRDGFSISQQLDSLGEHLFPAYWK 201 + I + + +S+I M L++ F +IS QL + L P K Sbjct: 144 KHLIGAVQNISGLL--------ISVIIMFFLLYYLFTSTNTNISNQL----QDLIPFNKK 191 Query: 202 KISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 +++ + +I ST + +IA+ +G ++G ++ G+ +T +++ +P G Sbjct: 192 NTNKLLTEIKNIIHSTLIATLLIAVLQGTIIGITFYAVGINGVALWAAVTTVLSFLPVVG 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL---VGGPIKLPFLPTFF 314 AP+ + ++ LI + + A + L I L +D LRP++ VG PF+ + Sbjct: 252 APLVWAPAVLFKLITQD-YVAAIVILVAGIILSNIDNVLRPYIQKKVGA--MHPFV-SLL 307 Query: 315 GLVGGVRTMGLLGLFIGP 332 G+ G+ GL+G+ +GP Sbjct: 308 GIFVGIYLFGLVGIVVGP 325 >gi|110598136|ref|ZP_01386414.1| Protein of unknown function UPF0118 [Chlorobium ferrooxidans DSM 13031] gi|110340268|gb|EAT58765.1| Protein of unknown function UPF0118 [Chlorobium ferrooxidans DSM 13031] Length = 359 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 80/340 (23%), Positives = 152/340 (44%), Gaps = 35/340 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F ++ +F+ F A + SAL + P+++ F S + A + V+++ + + Sbjct: 21 LFFAMIRYFFMAIFLAAIFSAL-----AMPLFNRFNRWFRGSQSLSAAMTIVTLLLVVFL 75 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 PL L + + S+ V + +P+ + P ++ +L T L L + Sbjct: 76 PLAAL-------LGVVASQAVRLSSIALPLIQQQIKEPA-VFDQQLRT--LPFYDELALY 125 Query: 137 SETFLKTNGIDFIPRFASRFGMIFL------------DYCLSIIFMIIALFFFYRDGFSI 184 E LK G AS+ G + D L IF+ +FFF +DG Sbjct: 126 REEILKKAG-----ELASQAGSLLFSSISSFTVSAVNDLFLLFIFLY-TMFFFLKDGQLF 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + ++ + R + V R+T G ++ + +G + G A AG+ S + Sbjct: 180 LDRILACLPLTKSDEYRLLDRFL-SVTRATLKGTLVVGVVQGSLAGLALHFAGIESAIFW 238 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + ++++++P G PI + IYL G A + L+ +I + +D +RP L+G Sbjct: 239 GTVMSVISVVPVLGPPIVWVPAVIYLAATGQYPQAIGVALFCSIVVGQIDNIIRPILIGR 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ L FF +GG+ GL G +GP++ AL +W+ Sbjct: 299 DTRMHELLIFFSTLGGIGFFGLFGFILGPIIAALFVTLWE 338 >gi|323139388|ref|ZP_08074439.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322395381|gb|EFX97931.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 368 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/317 (22%), Positives = 146/317 (46%), Gaps = 15/317 (4%) Query: 31 FAPVLS-ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FAP+++ ++I+ +P+++ S+ AV T + L + P+ +L ++E Sbjct: 48 FAPIIAWSVIMAVALYPVFAWLSSRLGGRPRLAAVALTCMSLVLVVGPVTWL-GLDLIEA 106 Query: 90 KELVSKVVLANQHGIPVP-RWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + V A + +P P + + P G + W+ ++ +S LK G Sbjct: 107 STGLIDSVNAGKLAVPPPVASVKEWPLIGQQLYDFWSLASTNMRSALAPLLPQLKPLGEK 166 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I +S G+ L + LS++ M F Y + + +++L + A + + Sbjct: 167 LIEAVSSA-GVGTLKFLLSVVVM--GFLFLYAE--PLVAVVENLASRIDGAQGARFVALA 221 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 IR+ G+ +++ + +V G+ LA VP L ++ I+ ++ G + V+I Sbjct: 222 GDTIRAVSRGVIGVSLLQAVVAGAGMTLAAVPGASVLTLLVLILGIVQVGPGLVTVPVAI 281 Query: 268 YLLIKGNIFNATCLFLW-GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + A L + GA+ L D ++PF + + P + TF G++GG+ G++ Sbjct: 282 WAWLSLSPLPALGLTICLGAVSLS--DALVKPFFLSRGLTTPMIVTFVGVIGGILAHGII 339 Query: 327 GLFIGPVLMALIAVIWK 343 GLF+GP+ ++AV W Sbjct: 340 GLFVGPI---VVAVAWN 353 >gi|212712086|ref|ZP_03320214.1| hypothetical protein PROVALCAL_03165 [Providencia alcalifaciens DSM 30120] gi|212685608|gb|EEB45136.1| hypothetical protein PROVALCAL_03165 [Providencia alcalifaciens DSM 30120] Length = 371 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 1/154 (0%) Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + IR+ LG+ + A+ + +V G L+G+ L V+ I + G + Sbjct: 207 LAAQSIRAVALGVVVTALIQAIVGGIGLALSGISYAAILTVLIFICCVAQLGPLLVMVPS 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++L G+ A L +W A+ + +D LRP+L+ LP + G++GG+ + G+ Sbjct: 267 VLWLFWTGDTTWAIILGVWAAV-VATMDGVLRPWLIKMGADLPMVLILVGVIGGILSFGM 325 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GLFIGPV++A+ + K + + E + + Sbjct: 326 IGLFIGPVVLAVSYSLLKAWMNEVAPPSEDLEAT 359 >gi|149278254|ref|ZP_01884392.1| hypothetical protein PBAL39_11872 [Pedobacter sp. BAL39] gi|149231020|gb|EDM36401.1| hypothetical protein PBAL39_11872 [Pedobacter sp. BAL39] Length = 350 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 5/150 (3%) Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 + LG IA+ +G ++ A+++ P + GVIT ++ +P G PI F +I ++ Sbjct: 195 ANVLGQGFIAMVQGSLVSLAFYVLDYPDPLFWGVITTFISFVPVLGPPIVFVPAAIIQML 254 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 GN A + ++G + + +D LR + + + T G+V G+ G+LGL G Sbjct: 255 NGNNVAAWAMLIFGFVVIINIDNVLRFMIAKKVGNIHPIITVIGVVIGIPLFGILGLVFG 314 Query: 332 PVLMA---LIAVIWKESIMAIKENKEKISS 358 P+L++ L+ I++ S MA E E+I + Sbjct: 315 PLLLSYFILLVKIYETSAMA-TERLERIKT 343 >gi|284006304|emb|CBA71539.1| putative inner membrane protein [Arsenophonus nasoniae] Length = 369 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 74/334 (22%), Positives = 138/334 (41%), Gaps = 28/334 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +I + L+ F L A ++ +WP++ SK ++ T+ V+ LF+ Sbjct: 20 ILLMITACFWVLRPFILGFLWAGMVVIATWPLFKKIESKLWHKKWLASIAMTLIVILLFV 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-WTKHLSH-PQSL 133 +P L + ++ Q+ P+ W P + EL W K+L L Sbjct: 80 IPFAIL-----------IGSII---QNSGPLIEWAKS-PAEIRLPELLWLKNLPFIGNKL 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMI---FLDYCLS---IIFMIIALFFF----YRDGFS 183 T + G I + G FL ++ +F +I + F + G S Sbjct: 125 FYGWHTLVANGGNTLISKLQPYVGEATSWFLAQAINAGRFMFHLIVMLLFSALLFLKGES 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L + + IR+ LG+ + A+ + ++ G LA VP Sbjct: 185 VISSIRHFAIRLAGTRGDMAILLAGQSIRAVALGVVVTALIQAIISGIGLALADVPYAAI 244 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++ + + G + I+L G+ A + +W +I + +D LRP L+ Sbjct: 245 LTILIFVCCVAQLGPLLIMVPSIIWLFWSGDTSWAIIMIVW-SIIVATMDGVLRPILIKM 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L + G++GG+ + G++GLFIGPV++A+ Sbjct: 304 GANLSMILILIGVIGGILSFGVIGLFIGPVVLAV 337 >gi|294636262|ref|ZP_06714670.1| putative membrane protein [Edwardsiella tarda ATCC 23685] gi|291090449|gb|EFE23010.1| putative membrane protein [Edwardsiella tarda ATCC 23685] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 5/150 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + IR+ LG+ + A+ + L+ G ++G+ V L V+ + + G + + Sbjct: 211 QAIRAVALGVVVTALAQSLLAGIGLAVSGIHYAVLLTVVMFVCCLAQLGPLLVLLPAVGW 270 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ T L +W + + +D LRP L+ LP L G++GG+ G++GL Sbjct: 271 LYWSGDTTWGTLLLVWSGV-VGTMDNVLRPALIRMGADLPMLLVLSGVIGGLLAFGMIGL 329 Query: 329 FIGPVLMA----LIAVIWKESIMAIKENKE 354 FIGPV++A L++ E+ +K+ ++ Sbjct: 330 FIGPVVLAVSYRLVSAWVNEAPPPVKDARQ 359 >gi|57641584|ref|YP_184062.1| hypothetical protein TK1649 [Thermococcus kodakarensis KOD1] gi|57159908|dbj|BAD85838.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus kodakarensis KOD1] Length = 345 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 20/199 (10%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT----IIAIGEGLVL 229 L F+Y G + S+Q+ L P +++ + + T + ++ + +G+++ Sbjct: 144 LAFYY--GLAYSEQIARTIRELLPEENRELGEEILTSVHKTLSALVRAWLLLNVAKGILM 201 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPI-----SFTAVSIYLLIKGNIFNATCLFLW 284 Y + GV S V VI + P+ + A +IY + G +A + ++ Sbjct: 202 TLGYIVFGV-SDVYTAVIAGFLTFAFSFVPLFEGWMIWLAAAIYFALNGMYLHAIGISVY 260 Query: 285 GAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 GA F+V D T+RP LV +L F G+VGG MGL G+ IGP+++ ++ V Sbjct: 261 GA---FLVSPMPDYTIRPMLVARDTELDETLVFIGMVGGTWAMGLKGIIIGPIVLNVLLV 317 Query: 341 IWKESIMAIKENKEKISSN 359 + KE + E+ ++SS+ Sbjct: 318 LIKE-WKKLTESSHQLSSS 335 >gi|159906021|ref|YP_001549683.1| hypothetical protein MmarC6_1639 [Methanococcus maripaludis C6] gi|159887514|gb|ABX02451.1| protein of unknown function UPF0118 [Methanococcus maripaludis C6] Length = 334 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 14/198 (7%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI----VPKVIRSTFLGMTI 220 + ++F+ F+F +DG I P +K + I + K +++ F+G + Sbjct: 144 MKLLFLSFMTFYFLKDGDKIKNSF----MLYVPKEKQKNAEIFVNEIHKALKTLFIGNAV 199 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNA 278 ++ G + YWL G+P+ + LG ++ I+ ++P GG I + +++Y L+ G I Sbjct: 200 TSLIVGFISIIGYWLIGIPNPITLGALSGILNILPVVGGWTI-YVPLTVYYLLTGEIVKG 258 Query: 279 TCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +G + L + D +RP ++ L + G G+ GL IGP+++A Sbjct: 259 VLLGFFGIVFLSLAPDFAIRPRVISKDGDLHPALVLIAFLIGPLVFGIPGLAIGPIIVAT 318 Query: 338 IAVIWKESIMAIKENKEK 355 + I K + EN+E Sbjct: 319 VYAIHK--VRRSIENREN 334 >gi|194290057|ref|YP_002005964.1| hypothetical protein RALTA_A1960 [Cupriavidus taiwanensis LMG 19424] gi|193223892|emb|CAQ69901.1| conserved hypothetical protein, UPF0118; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 367 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 10/146 (6%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH--VALGVITAIMAMI 254 P ++I+ + IR+ G+ IA + L++G A+ + GVP+ +A+ V+ +A + Sbjct: 203 PERGQRIASLCTATIRAVAQGVVGIAFIQMLLIGVAFVIKGVPAAGVLAMAVLLLGIAQL 262 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLPFLP 311 P A + V IY+ AT +F +I +F+ D L+P L+G + +P Sbjct: 263 P--ATLITVPVIIYVFASEGASVATIVF---SIYVFVAGLADNVLKPLLLGRGVDVPMPV 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ T G++GLFIGPV++A+ Sbjct: 318 VLIGALGGMVTGGVIGLFIGPVVLAV 343 >gi|284163852|ref|YP_003402131.1| hypothetical protein Htur_0560 [Haloterrigena turkmenica DSM 5511] gi|284013507|gb|ADB59458.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 5/152 (3%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 +V+ + +G +IA+ +GL+ G + G+P+ VI ++A+IP G + + + Sbjct: 188 EVMHAVLIGHVLIALVQGLLAGIGLIVTGIPNAAFWTVIMVVLALIPIIGTFLVWGPAVV 247 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +LL G A LF++ + + + D LRP +V +L G++GG G +G Sbjct: 248 FLLATGEPLFAVGLFVYSTVIVGLSDDYLRPLVVDRYAELNPAVIIVGVLGGAYAFGFMG 307 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LF GPV++ + + ++ +N +++ Sbjct: 308 LFFGPVILGAL----RATLTVFHDNYDRLERE 335 >gi|27379781|ref|NP_771310.1| hypothetical protein bll4670 [Bradyrhizobium japonicum USDA 110] gi|27352934|dbj|BAC49935.1| bll4670 [Bradyrhizobium japonicum USDA 110] Length = 365 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 138/309 (44%), Gaps = 33/309 (10%) Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 A I T+ + + I P +L + ++EL ++ + P L P G W + Sbjct: 72 AAILTLITLGIVIGPATWLGISAVDGVRELAHQLGTGDLALQSAPEQLKSWPLVGPWLYD 131 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 LW + ++ +++ +L+ + FA G+ L + +S+ +A F F Sbjct: 132 LWDQAYTNIRAVLREVAPYLQPLAGPLL-SFAGDAGVGTLQFLVSVF---VAGFLFPH-- 185 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPK-----------VIRSTFLGMTIIAIGEGLVLG 230 G L A + RIVP+ IR+ G+ +AI + L+ G Sbjct: 186 ----------GPRLVAASRGFLFRIVPEQSEHFLGLAGATIRAVAQGVIGVAIVQALLAG 235 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + LA VPS L I +++++ GA + V I++ ++ A L ++ + F Sbjct: 236 IGFKLAAVPSAGLLAFIVLLLSIVQIGAFLVLLPVIIWIWTAKDVTTALLLTVFLVLVGF 295 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I D L+P ++G + P + F G++GG G++GLFIGP+++ +V W E +MA Sbjct: 296 I-DTMLKPLVMGRGLTTPTIVIFVGVIGGTLAHGIVGLFIGPIIL---SVAW-EMMMAWI 350 Query: 351 ENKEKISSN 359 +++ + Sbjct: 351 RTEDRAGAG 359 >gi|119477618|ref|ZP_01617768.1| hypothetical protein GP2143_09155 [marine gamma proteobacterium HTCC2143] gi|119449121|gb|EAW30361.1| hypothetical protein GP2143_09155 [marine gamma proteobacterium HTCC2143] Length = 364 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 18/329 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ II++ + FF ++ ALI+ +P+ S K +S A + + + L Sbjct: 26 VVTIIIVLCIQVFAPFFGIMMWALILAVALYPLNLSLAKKFNGNSGRAAALIVIIGLLLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH-PQS 132 P + L + +L ++ H P ++++P G + +WT Q+ Sbjct: 86 GGPAVALGKSFTSHLLDLYTEFNSGKLHIQPPNSSVAELPLIGETLNRVWTNAADDLEQT 145 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSL 191 LK + E LK + AS G +F + +I I+ + G S SQ L+ L Sbjct: 146 LKNV-EPQLKELSKKALVIAASTTGEVFSFFASMVIAGIMMAY-----GRSGSQAMLEIL 199 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K+ + IRS G+ +A + L+LG+ + AG+P LGVI ++ Sbjct: 200 QRVSSEEKGGKLQALCVGTIRSVATGVIGVAFIQALLLGAGFIFAGIPGAGILGVIVLVV 259 Query: 252 AM--IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIK 306 + IP A ++ A++ YL G+ A+ + + LF+ D L+P L+G + Sbjct: 260 GILQIPA-ALVTLPAIA-YLWFGGDASTASNIAF--TVYLFVAGLADNVLKPMLLGRGVD 315 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 P G +GG+ G++GLF+G VL+ Sbjct: 316 APMPVVLLGALGGMVVAGIMGLFVGSVLL 344 >gi|297619520|ref|YP_003707625.1| protein of unknown function UPF0118 [Methanococcus voltae A3] gi|297378497|gb|ADI36652.1| protein of unknown function UPF0118 [Methanococcus voltae A3] Length = 360 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 104/200 (52%), Gaps = 16/200 (8%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L I+FM ++F +DG + + A+ K ++ + ++ F G + ++ Sbjct: 148 LIILFMT---YYFLKDGHKLLNATLIHIPECYQAHVKIFAQKLNDSYKNMFTGTALTSLI 204 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLF 282 ++ Y L G+P+ +ALGV+T I ++P GG I + ++IY L++G I A ++ Sbjct: 205 AMVIAIIGYQLLGIPNALALGVLTGICVLLPVVGGWGI-YMPLAIYYLLQGEILYALTIY 263 Query: 283 LWGAIEL-FIVDKTLRPFLV--GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++G I L FI+D +RP +V GG + P + T + T+G+ G +GP+++ Sbjct: 264 MFGTIFLSFILDFYIRPKVVKSGGNVH-PVM-TLTAFLIAPLTLGIAGFALGPIIVGAFD 321 Query: 340 VIW-----KESIMAIKENKE 354 ++ + S++ +++N E Sbjct: 322 SLYGLKDGEISLINLRQNCE 341 >gi|117921351|ref|YP_870543.1| hypothetical protein Shewana3_2910 [Shewanella sp. ANA-3] gi|117613683|gb|ABK49137.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 369 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 145/350 (41%), Gaps = 40/350 (11%) Query: 11 IMRWMIMFIILVSLYFLKGF----FAPVLS----ALIIGFTSWPIYSSFISKKEESSTFL 62 + ++M MFI L L F F+P L+ A+I+ +P + + + Sbjct: 14 VTKFMDMFIKFGMLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLSDKQGRA 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIP-GGMW 118 A + V + + ++P + + M LV +V NQ+ + VP +++IP G Sbjct: 74 ATLLIVIGLMILVLPTIMMVSSMTDNMGSLVERV---NQNTLEVPTPKESIANIPFVGAK 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + W K + SL + L I AS + + F+I + Y Sbjct: 131 IYDFWLKASTDLPSLVKSLQPHLGDAAKQVIHALASISASLLMSM---FSFIIAGIMMAY 187 Query: 179 RDGFSISQQLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + +Q + + P K+ I IR+ LG+ +A + L++G AG Sbjct: 188 --GHAGAQSSARIATRIAGPERGAKLVNICSSTIRAVALGVIGVAFIQALLIGIVMTFAG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSI----YLLIKGN------IFNATCLFLWGAI 287 +P L I I+ +I G A I V++ Y+ + G+ I L L GA Sbjct: 246 IP----LVGIFFILVLILGIAQIPALLVTLPAIAYIWMAGDNGTVGSIIYTVLLILAGA- 300 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VD L+P +G + P G +GG+ T G+LG+FIG L+++ Sbjct: 301 ----VDNVLKPIFLGRGVDAPMPVVLIGALGGMATSGILGMFIGATLLSI 346 >gi|255693657|ref|ZP_05417332.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] gi|260620544|gb|EEX43415.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] Length = 334 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + FI R G + + +++ MI L+F G +++++ + Sbjct: 119 LGKDTLSFIVSILPRIGQLIMSSISSLAVNLFVMIFVLYFMLIGG----KKMEAYINDIL 174 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P ++ ++ +RS +G+ ++AI +G + Y + G P+ + LG +T + Sbjct: 175 PFNETNTREVIHEINMIVRSNAIGIPLLAIIQGGIAMIGYLIFGAPNVLLLGFLTCFATI 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ F+A LF +GAI + D +R L L T Sbjct: 235 IPMVGTALVWFPVASYLAISGDWFHAIGLFAYGAIVVSQSDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 IFGVVIGLPLFGFMGIIFGP 314 >gi|294141912|ref|YP_003557890.1| hypothetical protein SVI_3141 [Shewanella violacea DSS12] gi|293328381|dbj|BAJ03112.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 371 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 80/359 (22%), Positives = 160/359 (44%), Gaps = 35/359 (9%) Query: 16 IMFIILVSLY---FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I I LV+++ +K F P++ II T +P+ S K S + + T+ + Sbjct: 23 IAVIFLVAIWCFEIIKPFIMPIVWGGIIAVTLFPLVSQLSKKSSLSLARASALVTLVSLA 82 Query: 73 LFIVPLLFLFYYGMLE-MKELVSKVVLANQHG---IPVPRW-LSDIPG-GMWASELWTKH 126 L ++P FLF ++ ++ + ++ Q G IP P+ ++++P G W + Sbjct: 83 LLLIPA-FLFSGALVSSTQDFIGEI----QQGTLVIPPPKESVAELPLIGNKLYSFWDQS 137 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASR------FGMIFLDYCLSIIFMIIALFFFYRD 180 ++ S+ +KT+ ++ A FGM L + +SII + + Sbjct: 138 STNLASV-------IKTHSVEIKAVLAKAVSALGGFGMTVLQFVISIIIAGV----LMTN 186 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S+ + L +Y K+++++ +RS G+ +A + ++ G + GVP+ Sbjct: 187 AKGASEVCQKIAIRLAGSYGKELTKLSVATVRSVVQGVIGVAFIQSILSGIGMGVVGVPA 246 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ ++A++ + + +Y+ + A +WG I + D L+P L Sbjct: 247 TGIWMLVVLLLAIVQLPPILILAPIMVYVFSVESTSVAIMFMVWG-ILVSASDAILKPML 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G + +P L G +GG+ G++GLF+G V+M L +K I I E + +N Sbjct: 306 MGRGVDIPMLVILLGAIGGMLMSGVVGLFVGAVVMGL---GYKLFIAWIDAEPETVKTN 361 >gi|269960287|ref|ZP_06174661.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834898|gb|EEZ88983.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 383 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 14/202 (6%) Query: 165 LSIIFMIIAL-FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 LSII + IA F Y + S++ L ++ K + ++ I+S LG+ +A Sbjct: 173 LSIISLAIAAGFMTYSE--SLASGLKTIAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAA 230 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 + L++G+ +++ GVP+ L ++ I+ + A ++ V Y+ + + AT + Sbjct: 231 IQALLIGAGFFIFGVPAAGLLTLVLMILCIAQLPALLAVLPVVGYMYMTQDTSTATMFTV 290 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 W + + + +P L+G + +P G +GG+ G++GLF+G V++A IW Sbjct: 291 W-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGGMLFYGIVGLFLGAVILA----IWY 345 Query: 344 E------SIMAIKENKEKISSN 359 E +I ++ +E ++ N Sbjct: 346 ELFVWWLNIEKAQQQQEALAEN 367 >gi|121637032|ref|YP_977255.1| hypothetical protein BCG_1161c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989505|ref|YP_002644192.1| hypothetical protein JTY_1134 [Mycobacterium bovis BCG str. Tokyo 172] gi|260186029|ref|ZP_05763503.1| hypothetical protein MtubCP_08383 [Mycobacterium tuberculosis CPHL_A] gi|121492679|emb|CAL71148.1| Conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772618|dbj|BAH25424.1| hypothetical protein JTY_1134 [Mycobacterium bovis BCG str. Tokyo 172] Length = 342 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 128 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 183 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 184 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHL 243 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 244 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 295 >gi|15608241|ref|NP_215617.1| hypothetical protein Rv1101c [Mycobacterium tuberculosis H37Rv] gi|15840540|ref|NP_335577.1| hypothetical protein MT1133 [Mycobacterium tuberculosis CDC1551] gi|148660887|ref|YP_001282410.1| hypothetical protein MRA_1112 [Mycobacterium tuberculosis H37Ra] gi|148822313|ref|YP_001287067.1| hypothetical protein TBFG_11122 [Mycobacterium tuberculosis F11] gi|167969235|ref|ZP_02551512.1| hypothetical protein MtubH3_14895 [Mycobacterium tuberculosis H37Ra] gi|215402931|ref|ZP_03415112.1| hypothetical protein Mtub0_04401 [Mycobacterium tuberculosis 02_1987] gi|215410721|ref|ZP_03419529.1| hypothetical protein Mtub9_05210 [Mycobacterium tuberculosis 94_M4241A] gi|215426395|ref|ZP_03424314.1| hypothetical protein MtubT9_08412 [Mycobacterium tuberculosis T92] gi|215429975|ref|ZP_03427894.1| hypothetical protein MtubE_04673 [Mycobacterium tuberculosis EAS054] gi|215445267|ref|ZP_03432019.1| hypothetical protein MtubT_04733 [Mycobacterium tuberculosis T85] gi|218752788|ref|ZP_03531584.1| hypothetical protein MtubG1_04765 [Mycobacterium tuberculosis GM 1503] gi|219556985|ref|ZP_03536061.1| hypothetical protein MtubT1_06650 [Mycobacterium tuberculosis T17] gi|253799860|ref|YP_003032861.1| hypothetical protein TBMG_02883 [Mycobacterium tuberculosis KZN 1435] gi|254231381|ref|ZP_04924708.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|254364007|ref|ZP_04980053.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254550098|ref|ZP_05140545.1| hypothetical protein Mtube_06519 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200141|ref|ZP_05767632.1| hypothetical protein MtubT4_08443 [Mycobacterium tuberculosis T46] gi|289442532|ref|ZP_06432276.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289555113|ref|ZP_06444323.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289569093|ref|ZP_06449320.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289744845|ref|ZP_06504223.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749636|ref|ZP_06509014.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289753166|ref|ZP_06512544.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289757189|ref|ZP_06516567.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289761240|ref|ZP_06520618.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|294993282|ref|ZP_06798973.1| hypothetical protein Mtub2_01932 [Mycobacterium tuberculosis 210] gi|297633640|ref|ZP_06951420.1| hypothetical protein MtubK4_05944 [Mycobacterium tuberculosis KZN 4207] gi|297730627|ref|ZP_06959745.1| hypothetical protein MtubKR_06034 [Mycobacterium tuberculosis KZN R506] gi|306775256|ref|ZP_07413593.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306781830|ref|ZP_07420167.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306788174|ref|ZP_07426496.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|306792503|ref|ZP_07430805.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|306796908|ref|ZP_07435210.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306802786|ref|ZP_07439454.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306806968|ref|ZP_07443636.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306967170|ref|ZP_07479831.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|307079086|ref|ZP_07488256.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307083650|ref|ZP_07492763.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|313657957|ref|ZP_07814837.1| hypothetical protein MtubKV_06039 [Mycobacterium tuberculosis KZN V2475] gi|8928492|sp|O53449|Y1101_MYCTU RecName: Full=UPF0118 membrane protein Rv1101c/MT1133 gi|2896738|emb|CAA17217.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13880717|gb|AAK45391.1| membrane protein, putative [Mycobacterium tuberculosis CDC1551] gi|124600440|gb|EAY59450.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|134149521|gb|EBA41566.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148505039|gb|ABQ72848.1| hypothetical protein MRA_1112 [Mycobacterium tuberculosis H37Ra] gi|148720840|gb|ABR05465.1| conserved membrane protein [Mycobacterium tuberculosis F11] gi|253321363|gb|ACT25966.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|289415451|gb|EFD12691.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289439745|gb|EFD22238.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289542847|gb|EFD46495.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289685373|gb|EFD52861.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690223|gb|EFD57652.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289693753|gb|EFD61182.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289708746|gb|EFD72762.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|289712753|gb|EFD76765.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|308216193|gb|EFO75592.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308325466|gb|EFP14317.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308335191|gb|EFP24042.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308338997|gb|EFP27848.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308342664|gb|EFP31515.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308346550|gb|EFP35401.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308350470|gb|EFP39321.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308355121|gb|EFP43972.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308362999|gb|EFP51850.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308366647|gb|EFP55498.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323720381|gb|EGB29475.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326904672|gb|EGE51605.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328459605|gb|AEB05028.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 385 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 171 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 226 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 227 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHL 286 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 287 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 338 >gi|31792294|ref|NP_854787.1| hypothetical protein Mb1131c [Mycobacterium bovis AF2122/97] gi|31617882|emb|CAD93992.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length = 342 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 128 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 183 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 184 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHL 243 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 244 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 295 >gi|55378831|ref|YP_136681.1| hypothetical protein rrnAC2127 [Haloarcula marismortui ATCC 43049] gi|55231556|gb|AAV46975.1| unknown [Haloarcula marismortui ATCC 43049] Length = 236 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 6/148 (4%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTII----AIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 PA + ++ + + +R T + ++ A G +V +WL G AL V+ I+ Sbjct: 70 PASYHEVVNRLHQRLRGTLYAIYVLQAATAFGTFVVAWVVFWLLGYQGAFALAVVAGILQ 129 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKLPFL 310 +P G + +++ +I GNI A + ++G + + F+ D +RP L LP Sbjct: 130 FVPVIGPSVVVLTIAVADIINGNITGAVLVTVFGLVFVGFLPDAVIRPKLARYTTGLPAS 189 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALI 338 F G GGV T+G++G GPV++AL+ Sbjct: 190 LYFVGFTGGVLTLGVIGFIAGPVVIALL 217 >gi|298524597|ref|ZP_07012006.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308378833|ref|ZP_07484018.2| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|298494391|gb|EFI29685.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308359074|gb|EFP47925.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] Length = 350 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 136 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 191 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 192 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHL 251 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 252 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 303 >gi|237750422|ref|ZP_04580902.1| amaA [Helicobacter bilis ATCC 43879] gi|229373952|gb|EEO24343.1| amaA [Helicobacter bilis ATCC 43879] Length = 349 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 29/276 (10%) Query: 103 GIPVPRWLSDIPGGMWASELWTKHLS------HPQSLKILSE-TFLKTNGIDFIPRFASR 155 G+ + WLS + S+L ++L+ H +L+E +F K +GI + + +S Sbjct: 82 GVKMINWLS-LQSMFDQSKLALQNLAEKLPFIHDYLPSLLNEISFAKISGI--VLKLSSI 138 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IR 212 G L + + +I+ LF F+ G ++L + + + P +I+ + +V +R Sbjct: 139 VGENGLKFIIDGFVIIVFLFVFFYFG----ERLYAYMKRILPFEEAQINEVAMEVSGTLR 194 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 FL + +G G + G V LG++ I +MIP G I + + L+ Sbjct: 195 LVFLSTFFNVVMQGTAFGIIAYFFGFDG-VLLGILYGICSMIPIVGGVIVWLPICAILVY 253 Query: 272 KGNIFNATCLFLWGAIEL-FIVDKTLRPFLVG--------GPIKLPFLPTFFGLVGGVRT 322 +G+ A + L+ A+ + FI+D ++P+L+G P+++ FF ++ G+ Sbjct: 254 QGDFKGAVIVGLYSAVFIGFIIDNIVKPWLIGIVNKRILRTPLQINEFVIFFAILAGIGA 313 Query: 323 MGLLGLFIGPVLMAL-IAVIWKESIMAIKENKEKIS 357 G G+ IGP + AL IA++ + +NKE I Sbjct: 314 FGFWGIIIGPAITALFIALLRVYEHEFVDKNKEMIC 349 >gi|289446691|ref|ZP_06436435.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289419649|gb|EFD16850.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length = 311 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 97 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 152 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 153 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHL 212 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 213 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 264 >gi|167626468|ref|YP_001676968.1| hypothetical protein Fphi_0251 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596469|gb|ABZ86467.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 339 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 34/292 (11%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + S+FL V+ + +C+FI P+L + YY + E+ + +Q + + IP Sbjct: 53 KHRSSFLLVMGIL--LCVFI-PILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIP- 108 Query: 116 GMWASELWTKHLSH-PQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMII 172 + + +H +++ S+T + G +P R+ + F+ L I Sbjct: 109 --YIGSILQEHFDKLIKAINDDSDTIISNLG-QILPKVRYVGSTSISFITDFL------I 159 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVL 229 L Y+ S S L+ + + + + I R L + + A G V+ Sbjct: 160 TLLLVYQFLVS-SSTLEKFAKKVVLKDFDDSDSFISTAIITTRRVSLAIFLTASLVGTVM 218 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF------NATCLFL 283 + L G+P+ + L AI +MIP F +Y+LI ++F A + + Sbjct: 219 AIVFLLTGMPTPILLAFTVAIASMIP------FMVGIVYILIGASVFVVYGATKAIIILV 272 Query: 284 WG-AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 G A+ +F D ++P ++ ++L F + G++GG++ G +G+F+GPV+ Sbjct: 273 VGFALNIF-TDNIMQPKIINKQVQLSFAASLIGILGGIQAFGFIGIFLGPVI 323 >gi|32474562|ref|NP_867556.1| permease [Rhodopirellula baltica SH 1] gi|32445101|emb|CAD75103.1| probable permease [Rhodopirellula baltica SH 1] Length = 664 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 115/250 (46%), Gaps = 24/250 (9%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF---ASRFGMIFLD 162 V W++ + GG S+L +++P S ++ PRF S G I + Sbjct: 406 VRSWMNQLLGGSLRSQL--SLIANPDEKDFSS--LIRMARESLQPRFVRLTSATGSIVVQ 461 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQL------DSLGEHLFPAYWKKISRIVPKVIRSTFL 216 ++ ++++++FF DG + + L D EH + + SR V L Sbjct: 462 VIFGLVILVVSVYFFLIDGPVMIRTLMRLSPMDDAYEHQLLTEFDRTSRAV-------VL 514 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYL-LIKG 273 A+ +G++ +WL G V L +T++MA++P G A + + +++L L+ Sbjct: 515 ASVASAVVQGILATIGFWLCGFDQIVLLLFLTSVMALVPFLGAASV-WVPCALWLGLVDQ 573 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A L ++GA + +D ++ +++ G +L L ++GGV G +G+ +GP+ Sbjct: 574 RWIAAAFLAIYGAAVVSSIDNVIKVYVLHGRSQLHPLFALLSVIGGVSVFGPIGILVGPM 633 Query: 334 LMALIAVIWK 343 ++ + + + Sbjct: 634 VVVFLQTLLE 643 >gi|327543396|gb|EGF29821.1| permease [Rhodopirellula baltica WH47] Length = 645 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 115/250 (46%), Gaps = 24/250 (9%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF---ASRFGMIFLD 162 V W++ + GG S+L +++P S ++ PRF S G I + Sbjct: 387 VRSWMNQLLGGSLRSQLSL--IANPDEKDFSS--LIRMARESLQPRFVRLTSATGSIVVQ 442 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQL------DSLGEHLFPAYWKKISRIVPKVIRSTFL 216 ++ ++++++FF DG + + L D EH + + SR V L Sbjct: 443 VIFGLVILVVSVYFFLIDGPVMIRTLMRLSPMDDAYEHQLLTEFDRTSRAV-------VL 495 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYL-LIKG 273 A+ +G++ +WL G V L +T++MA++P G A + + +++L L+ Sbjct: 496 ASVASAVVQGILATIGFWLCGFDQIVLLLFLTSVMALVPFLGAASV-WVPCALWLGLVDQ 554 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A L ++GA + +D ++ +++ G +L L ++GGV G +G+ +GP+ Sbjct: 555 RWIAAAFLAIYGAAVVSSIDNVIKVYVLHGRSQLHPLFALLSVIGGVSVFGPIGILVGPM 614 Query: 334 LMALIAVIWK 343 ++ + + + Sbjct: 615 VVVFLQTLLE 624 >gi|197285279|ref|YP_002151151.1| hypothetical protein PMI1420 [Proteus mirabilis HI4320] gi|227355709|ref|ZP_03840102.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|194682766|emb|CAR42995.1| putative membrane protein [Proteus mirabilis HI4320] gi|227164028|gb|EEI48925.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 370 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 IR+ LG+ + A+ + ++ G ++GVP L V+ I + G ++L Sbjct: 211 IRAVALGVVLTALIQAVIGGIGLGISGVPYATVLTVLMFICCLAQLGPLFVLVPSILWLF 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G+ + +WG I + +D LRPFL+ LP + G++GG+ T+G++GLFI Sbjct: 271 WTGDTTWGIVMIIWGGI-VATMDGVLRPFLIKMGADLPMVLILTGVIGGILTLGMIGLFI 329 Query: 331 GPVLMAL 337 GPV++A+ Sbjct: 330 GPVVLAV 336 >gi|153832184|ref|ZP_01984851.1| hipothetical membrane protein [Vibrio harveyi HY01] gi|148871495|gb|EDL70350.1| hipothetical membrane protein [Vibrio harveyi HY01] Length = 381 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%) Query: 165 LSIIFMIIAL-FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 LSII + IA F Y + SI+ L ++ K + ++ I+S LG+ +A Sbjct: 173 LSIISLAIAAGFMTYSE--SIASGLRTVAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAA 230 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 + L++G+ +++ GVP+ L +I I+ + A ++ V Y+ + + AT + Sbjct: 231 IQALLIGAGFFIFGVPAAGLLTLILMILCIAQLPALLAVLPVVGYMYMTNDTSTATMFTV 290 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 W + + + +P L+G + +P G +GG+ G++GLF+G V++A IW Sbjct: 291 W-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGGMLFYGIVGLFLGAVILA----IWY 345 Query: 344 E------SIMAIKENKEKISSN 359 E SI ++ +E + Sbjct: 346 ELFVWWLSIEKAQQQEESLREE 367 >gi|167765242|ref|ZP_02437355.1| hypothetical protein BACSTE_03630 [Bacteroides stercoris ATCC 43183] gi|167696870|gb|EDS13449.1| hypothetical protein BACSTE_03630 [Bacteroides stercoris ATCC 43183] Length = 336 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L N + F R G + + +++ ++ L+F G + Q ++ L Sbjct: 119 LSGNSLSFFISSLPRIGQTLMGGISSFIVNMFVLVFVLYFMLIGGKKMEQYVN----ELL 174 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P IV ++ +RS +G+ ++A+ +G V YW+ P+ + G +T ++ Sbjct: 175 PFNETNTQEIVHEINMIVRSNAIGIPLLAVIQGGVAMLGYWIFDAPNILFSGFLTGFASI 234 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + +++Y+ + GN F A L ++G++ + +D +R + + L T Sbjct: 235 IPMAGTALVWIPIAVYMALIGNWFQAIGLVIFGSLVISQLDNLIRFVIQKKMADIHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 295 VFGVVIGLSLFGFMGVIFGP 314 >gi|189468029|ref|ZP_03016814.1| hypothetical protein BACINT_04423 [Bacteroides intestinalis DSM 17393] gi|189436293|gb|EDV05278.1| hypothetical protein BACINT_04423 [Bacteroides intestinalis DSM 17393] Length = 346 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMT 219 + +++ ++ L+F G Q+++ + P + + R + ++ S +G+ Sbjct: 155 FAVNLFVLVFVLYFMLIGG----QKMEQYISDILPFNKSNTDHVVREIKMIVHSNAVGIP 210 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 ++AI +G V YW VP + G +T + +IP G + + +++Y+ + G++FN Sbjct: 211 LLAIIQGGVAMIGYWFFDVPDILLTGFLTCLATVIPMVGTALVWFPIAVYMALSGDLFNG 270 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L ++G + + +D +R L + L T FG+V G+ G +G+ GP Sbjct: 271 IGLAIFGTLIISQLDNLIRFILQKRMADIHPLITIFGVVIGLSLFGFMGVIFGP 324 >gi|259046341|ref|ZP_05736742.1| transport protein [Granulicatella adiacens ATCC 49175] gi|259036978|gb|EEW38233.1| transport protein [Granulicatella adiacens ATCC 49175] Length = 389 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 79/337 (23%), Positives = 139/337 (41%), Gaps = 49/337 (14%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV +I + PIY ++KK + ++ V V+ +FI+ + L Sbjct: 52 FISAIGVPVACGAVIYYLVKPIYDYLLNKKVPKGIAI-LLVMVGVIVIFIMIITSLVPII 110 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LVS++ P + I SE K + + + E F K N Sbjct: 111 QKQLLDLVSQL----------PYYYQII------SEQVEKFM-QTGFFETIQEQFNKINT 153 Query: 146 IDFIPRFASRFGMIFL--------------DYCLSIIFMIIALFFFYRDGFSI----SQQ 187 DFI R I D ++I+ M + L++ +DG + ++ Sbjct: 154 -DFIQSITERLNGILNFTFSGIGSVVGIIGDIVITIMTMPVILYYLLKDGNKVIPFVTRM 212 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +H ++++ V IR G +AI G Y L G+P V +G+I Sbjct: 213 FPTRSQHKISVMLNEMNQQVSSYIR----GQITVAICVGFTYIIGYTLIGLPYGVTIGMI 268 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC---LFLWGAIELFIVDKTLRPFLVGG 303 ++ +IP G+ I T LI G + N T +FL IE I + L+P ++G Sbjct: 269 AGLLTIIPYLGSIIGLTPA----LIIGFVTNPTLALHVFLVFVIEQLIESRVLQPLILGS 324 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +K+ + L+ + GL+GL I + A++ V Sbjct: 325 SLKMHPVTILIILLAAGKMFGLVGLLIAVPVYAVVKV 361 >gi|224370719|ref|YP_002604883.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223693436|gb|ACN16719.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 386 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 24/218 (11%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDG-------FSISQQLDSLGEHLFPAYWKKISR 205 AS I +CL M+I +F+ + DG + IS D E LF K Sbjct: 175 ASNVFKIIFYFCL----MLIVVFYLFIDGARFVDYIYDISPLADEHNEKLFC----KFKE 226 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + V+ LG I +G+V G A+++ G+ S GVI +A +P G + Sbjct: 227 MAGAVLVGNGLGGLI----QGVVGGGAFFMLGLASPFLWGVIMGFLAFLPILGIGVVLIP 282 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L++K + + + A+ + ++ +P +VG +K+ L FF ++GG+ G Sbjct: 283 TGLILMLKERMAAGIFILVLYAVLSWGIEYVFKPKVVGDRVKMHPLVVFFSIIGGLEIYG 342 Query: 325 LLGLFIGPVLMAL---IAVIWKESIMAIKENKEKISSN 359 +LG+ GP+++ L +A I+ + AI E +++ N Sbjct: 343 ILGIIYGPLIITLFLTLADIYFANFQAIVE-PDRVKGN 379 >gi|55380329|ref|YP_138178.1| hypothetical protein rrnB0307 [Haloarcula marismortui ATCC 43049] gi|55233054|gb|AAV48472.1| unknown [Haloarcula marismortui ATCC 43049] Length = 318 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 3/132 (2%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTA 264 + V+ G +AI +G+V G GVP+ + + ++AM+P G P+ A Sbjct: 166 IDDVMLGVLFGHVFVAIVQGIVAGVGLAATGVPNAMFWTAVMVVLAMVPLIGTIPVWGGA 225 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V IYL A LFL+ I + + D LRPF V KL G++GG G Sbjct: 226 V-IYLYATDEPLLAVGLFLYSVIIVGLTDDYLRPFAVDRYAKLNPAVILLGILGGAYAFG 284 Query: 325 LLGLFIGPVLMA 336 ++GL GPV++ Sbjct: 285 VMGLLFGPVVLG 296 >gi|306783812|ref|ZP_07422134.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308331376|gb|EFP20227.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] Length = 385 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 171 VYVFVALLVNREKLRTLIGQLNLLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 226 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 227 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHL 286 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 287 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 338 >gi|32490775|ref|NP_871029.1| hypothetical protein WGLp026 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165981|dbj|BAC24172.1| yb1688 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 356 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 146/309 (47%), Gaps = 19/309 (6%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVI-ATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A II ++WP++ I K +S FL+++ + ++C FI P+ + +++S Sbjct: 41 ASIIVISTWPLFIR-IKKFLYNSYFLSILLMEMLLICFFIFPVFIVSTSFFKNFSKMISL 99 Query: 96 VVLANQHGIPVPRWLSDIP--GGMWASEL----WTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ +Q+ + IP G + + + K+LS + L E ++ T+ I Sbjct: 100 IITFDQYIFSNLLLIKKIPIIGNKLFNTINILIYEKNLSLYEKL----EPYI-THITKII 154 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + +F + L+++F I F Y G I++ + ++ K++ + K Sbjct: 155 LSNLTLIWNLFFNCLLTVLFSI----FLYFKGNYINKFIKIFIYYIDDIKGKELVVLAEK 210 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 IRS F+ + + +I + ++ +++ VP L ++ I + G F + ++ Sbjct: 211 SIRSVFVSVILASIIQTILSSIGLFISNVPFKSILIILIFIFCITQLGIFPIFIPIILWF 270 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP-IKLPFLPTFFGLVGGVRTMGLLGL 328 K N +T LF+W + +F +D L+ L+ IKL L FG++GG + G++G+ Sbjct: 271 YYKENYIFSTILFVWSCL-VFALDNILKQILIKSIGIKLHNLLIIFGILGGFLSFGMIGI 329 Query: 329 FIGPVLMAL 337 FIGP ++ + Sbjct: 330 FIGPTILTI 338 >gi|120437128|ref|YP_862814.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117579278|emb|CAL67747.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 339 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 ++++S LG+ ++A+ +G++ + + GVP VITAI +MIP G I I Sbjct: 191 QLVKSNALGIPLVALVQGIIALIGFLIFGVPDPFFWFVITAIGSMIPFIGTAIGILPACI 250 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L +GN F A L ++G + + D +R +++ + L T FG++ GV G +G Sbjct: 251 LLFAQGNDFQAISLLIYGFVVVGSTDNIIRLYVLEKLASVHPLITLFGVIVGVPLFGFIG 310 Query: 328 LFIGP 332 L GP Sbjct: 311 LIFGP 315 >gi|51245086|ref|YP_064970.1| hypothetical protein DP1234 [Desulfotalea psychrophila LSv54] gi|50876123|emb|CAG35963.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 356 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%) Query: 232 AYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 ++ +AG+ G + A+M++IP G I + I + + N F L + + Sbjct: 226 SFAIAGIQGPFFWGTVMAVMSVIPAVGTAIIWGPALIIIALMSNFFGVAVLAIGCGLIAG 285 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +D LRP LVG ++ L FG +GG+ GLLG+ IGP++ AL +W+ Sbjct: 286 NIDNFLRPRLVGKDTEMHDLFVLFGTLGGISMFGLLGIIIGPLIAALFLTLWQ 338 >gi|159029048|emb|CAO90034.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 358 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 9/188 (4%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G+ L + +SI+ AL ++ ++ ++ L E + P ++ + + Sbjct: 153 LATSTGLTVLKFIVSILIAA-ALTLSAKN---LTHLMNRLAEKIAPGRGIALASLTASTV 208 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ G+ +AI + L++G G P+ L +T I+ ++ G + I+ + Sbjct: 209 RNVSRGIIGVAIIQSLLIGIGLVTVGTPAAGLLTFLTLILGILQIGPGLIVLGALIHAWV 268 Query: 272 KGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + N+ L LW I +VD L+P L+G + +P + G+ GGV G++GLF Sbjct: 269 --TLPNSIALLFTLW-MIPATLVDNFLKPILMGRGLPIPMVVILLGVFGGVIAYGIIGLF 325 Query: 330 IGPVLMAL 337 +GPVL+ L Sbjct: 326 VGPVLLGL 333 >gi|257095745|ref|YP_003169386.1| hypothetical protein CAP2UW1_4216 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048269|gb|ACV37457.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 361 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 9/263 (3%) Query: 101 QHGIPV--PRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 +HG+P P WL +P G + W + + + + L FL D + A Sbjct: 99 EHGLPATPPAWLISMPIVGTDIASYWHELIESREEMNNLLRQFL-----DPTRKLALAAV 153 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 +F L ++ +I +FF +RD + L + L +++ +V + G Sbjct: 154 ALFAQGLLQLVLVIFFVFFIFRDAHIYVEALHTGSRMLAGDLGERMLALVEGTVTGVMAG 213 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 + A + +V + +AGVP V L V T +M+P GA + + +++L +G Sbjct: 214 IVGTAAAQAVVGMVGFIIAGVPGIVILTVATFFFSMVPVVGATLIWLGAAVWLYNEGQAG 273 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + LWG + VD L+P L+ LP L G+ GGV G +GLF+GP L+A Sbjct: 274 WAVFMVLWGMFGISSVDNFLKPVLISRTASLPLLLIVVGVFGGVLVFGFIGLFLGPTLLA 333 Query: 337 LIAVIWKESIMAIKENKEKISSN 359 L V+ +E + + E+ +S Sbjct: 334 LGQVLIREWLAHAGPDVERPASR 356 >gi|268592592|ref|ZP_06126813.1| putative membrane protein [Providencia rettgeri DSM 1131] gi|291312006|gb|EFE52459.1| putative membrane protein [Providencia rettgeri DSM 1131] Length = 371 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 1/132 (0%) Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + IR+ LG+ + A+ + +V G L+G+ L V+ I + G + Sbjct: 207 LAAQSIRAVALGVVVTALIQAIVGGIGLALSGIGYAAILTVLLFICCVAQLGPLLIMVPS 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I+L G+ L +W A+ + +D LRP+L+ LP + G++GG+ + G+ Sbjct: 267 VIWLFWTGDTTWGIILAIWAAV-VATMDGVLRPWLIKMGADLPMVLILVGVIGGILSFGM 325 Query: 326 LGLFIGPVLMAL 337 +GLFIGPV++A+ Sbjct: 326 IGLFIGPVVLAV 337 >gi|224538267|ref|ZP_03678806.1| hypothetical protein BACCELL_03158 [Bacteroides cellulosilyticus DSM 14838] gi|224520127|gb|EEF89232.1| hypothetical protein BACCELL_03158 [Bacteroides cellulosilyticus DSM 14838] Length = 348 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMT 219 + +++ ++ L+F G Q+++ + P A + + + ++ S +G+ Sbjct: 155 FAVNLFVLVFVLYFMLIGG----QRMEKYISEILPFSEANTEHVVHDIKMIVHSNAVGIP 210 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 ++AI +G V YW VP + G +T + +IP G + + +++Y+ + G++FN Sbjct: 211 LLAIIQGGVAMIGYWFFDVPDILLTGFLTCLATVIPMVGTALVWFPIAVYMALSGDLFNG 270 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L ++G + + +D +R L + L T FG+V G+ G +G+ GP Sbjct: 271 IGLAIFGTLIISQLDNLIRFILQKKMADIHPLITIFGVVIGLSLFGFMGVIFGP 324 >gi|227111729|ref|ZP_03825385.1| putative inner membrane protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 369 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 74/328 (22%), Positives = 142/328 (43%), Gaps = 16/328 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ LFI Sbjct: 22 ITIMIIACFWVVQPFILGFAWACMVVIATWPLLIKFQALLWGRRSLAVLVMTLLLILLFI 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--- 132 VP+ L + L+S P WL+ IP + +L+ + QS Sbjct: 82 VPIAVLVSSVVENSSALMSWGARQENFSPPTLEWLTSIP--LVGEKLFNSWQALLQSGGS 139 Query: 133 --LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + F KT ++ A+ G + L +IF + Y G ++++ + Sbjct: 140 GLFAKVQPYFGKTA--TWLVAQAAHVGRFLMHCSLMLIFSAL----LYYKGEAVAKAVRH 193 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 194 FAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFL 253 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + G P+ A+ I+L G+ T L +W + + +D +RP L+ LP Sbjct: 254 CCLAQLGPLPVLIPAI-IWLYWTGDNTWGTILLVWSCV-VGTIDNVIRPVLIKMGADLPM 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L G++GG+ G++G+FIGPV++A+ Sbjct: 312 LLILSGVIGGLLAFGMIGIFIGPVVLAV 339 >gi|283954986|ref|ZP_06372493.1| hypothetical protein C414_000350024 [Campylobacter jejuni subsp. jejuni 414] gi|283793484|gb|EFC32246.1| hypothetical protein C414_000350024 [Campylobacter jejuni subsp. jejuni 414] Length = 347 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 36/293 (12%) Query: 61 FLAVIATVSVMC-LFIVPLLFLFYYGMLEMKELVSK--VVLANQHGIPVPRWLSDIPGGM 117 FLA I T + M LF P F Y M+E+ + + L Q V + +P Sbjct: 56 FLASILTTACMVLLFFTP----FVYTMIELAKASKNFDINLVTQTLDYVKNYQFTLPESF 111 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + +P+ + L+ L + I +AS F + + ++ +I +F+F Sbjct: 112 --------NFLYPKIKEFLASIDLNSISKQ-ILSYASSFTKSGAKFLVDMV--LICVFYF 160 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + + +L + + P K++ + V V+ M I+AI +G + G Sbjct: 161 FANLY--GTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGTLFGLITM 218 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FI 291 G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ I + FI Sbjct: 219 FYGYDG-ILMGVIFAVSSLIPAIGGALI-YVPVSLYEFASNNLNSALVIFIYSVIVISFI 276 Query: 292 VDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 277 ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILT 329 >gi|323492023|ref|ZP_08097188.1| hypothetical protein VIBR0546_07984 [Vibrio brasiliensis LMG 20546] gi|323313752|gb|EGA66851.1| hypothetical protein VIBR0546_07984 [Vibrio brasiliensis LMG 20546] Length = 361 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 49/352 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ K + +++++ + + + + PLLF+F Sbjct: 32 YINSIVMAFIISLLMFPIHEWIERKLPKHKNTVSLLSCIVLTFIIVFPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + +Q+ V +W++ GG+ HP +K LS T+L + I+ Sbjct: 85 AAIVQQGSAFSQN---VYQWVTH--GGI------QTIFEHPWVVKSLSLVNTYLPFDTIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PQEIAQKVAQFATSFGSNLVGISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + K+ V +V +S +G + AI +G G WLAG P + G + Sbjct: 190 AIRHILPLSRSQEDKLLDEVEQVAKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + +IYL + G+ A L +W + +D LRPFL+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAIYLFLTGDTTWAIFLTVWSVAVVGSIDNLLRPFLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG+ GL+GL GP++ A+ V I++E + +++ Sbjct: 309 MNTLMIFFSLLGGLHLFGLIGLIYGPIIFAVTMVLFNIYEEEFQGFLDQQDR 360 >gi|156977852|ref|YP_001448759.1| hypothetical protein VIBHAR_06643 [Vibrio harveyi ATCC BAA-1116] gi|156529446|gb|ABU74531.1| hypothetical protein VIBHAR_06643 [Vibrio harveyi ATCC BAA-1116] Length = 365 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%) Query: 165 LSIIFMIIAL-FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 LSII + IA F Y + SI+ L ++ K + ++ I+S LG+ +A Sbjct: 157 LSIISLAIAAGFMTYSE--SIASGLRTVAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAA 214 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 + L++G+ +++ GVP+ L +I I+ + A ++ V Y+ + + AT + Sbjct: 215 IQALLIGAGFFIFGVPAAGLLTLILMILCIAQLPALLAVLPVFGYMYMTNDTSTATMFTV 274 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 W + + + +P L+G + +P G +GG+ G++GLF+G V++A IW Sbjct: 275 W-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGGMLFYGIVGLFLGAVILA----IWY 329 Query: 344 E------SIMAIKENKEKISSN 359 E SI ++ +E + Sbjct: 330 ELFVWWLSIEKAQQQEESLREE 351 >gi|255535413|ref|YP_003095784.1| hypothetical protein FIC_01274 [Flavobacteriaceae bacterium 3519-10] gi|255341609|gb|ACU07722.1| hypothetical protein FIC_01274 [Flavobacteriaceae bacterium 3519-10] Length = 354 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 78/337 (23%), Positives = 156/337 (46%), Gaps = 34/337 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++ + L+ L F + VL A+ + + Y +K+ +S + + V+ F V Sbjct: 19 LFLVALILFELNYFMSGVLGAVTLYVLTRNFYLRLTEEKKWNSNLVITLIIFLVIITFAV 78 Query: 77 PLLFLFYYGMLEMKELVS--KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 PL + + ++ E+VS + ++ + + V + +TK S + Sbjct: 79 PLWIILEILIPKINEIVSDREAIVEKYNAVRV----------FLENNQYTKRFDLQLSNE 128 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ--LDSLG 192 + + K I +IP + G + L IF +ALF Y F + Q ++ Sbjct: 129 RIMQAVNKV--ISYIPSTLNWVGQM-----LGNIF--VALFILY---FMLKQSRIMEQKF 176 Query: 193 EHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + L P + + +IRS G+ I+ + +G++ Y++ GV + + G++T Sbjct: 177 KELLPVSRESKKYFIQHNAALIRSNAYGIPILGLSQGIIAIIGYYIFGVENAIFWGLLTG 236 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI--VDKTLRPFLVGGPIK 306 +++P G I + + IY + G++ N LFL G LF+ +D LR L+ Sbjct: 237 AASIVPVVGTMIVYLPICIYQVATGDVNNG--LFLAGFCLLFVGGIDNVLRLTLLKKMAD 294 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L T FG++ G++ G++GL GPVL+++ ++++ Sbjct: 295 IHPLVTVFGVLLGLQMFGVMGLVFGPVLLSMPGILYR 331 >gi|218263328|ref|ZP_03477475.1| hypothetical protein PRABACTJOHN_03160 [Parabacteroides johnsonii DSM 18315] gi|218222806|gb|EEC95456.1| hypothetical protein PRABACTJOHN_03160 [Parabacteroides johnsonii DSM 18315] Length = 341 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K + + ++ S +G+ ++AI +GL+ YW+ VPS G +T +IP G Sbjct: 187 KNVLNEINMIVTSNAIGIPLLAIIQGLIALLGYWIFDVPSPFLFGFLTCFATIIPVVGTA 246 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + +++Y+++ G+ NA L + I + VD +R L L T FG++ G Sbjct: 247 LVWLPLALYMVLTGDWVNAAGLTAYALIIITNVDNLIRFILQKKMADTHPLITIFGVIIG 306 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GP+L+++ Sbjct: 307 LSLFGFMGIIFGPLLISI 324 >gi|45358583|ref|NP_988140.1| hypothetical protein MMP1020 [Methanococcus maripaludis S2] gi|44921341|emb|CAF30576.1| Protein of unknown function UPF0118 [Methanococcus maripaludis S2] Length = 334 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 12/196 (6%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI----VPKVIRSTFLGMTI 220 + ++F+ F+F +DG + DS ++ P K+ + + + K +++ F+G + Sbjct: 144 MKLLFLSFMTFYFLKDG---DKLTDSFLIYV-PEDKKRNTALFLSEIHKALKTLFIGNAV 199 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNA 278 ++ G++ YWL G+P+ + LG ++ I+ ++P GG I + +++Y L+ G I Sbjct: 200 TSVIVGIISIIGYWLIGIPNPITLGALSGILNILPVVGGWTI-YVPLTVYYLLTGEIAKG 258 Query: 279 TCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L L+G I L + D +RP ++ L + G G+ GL IGP+++A Sbjct: 259 ILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPALVLIAFLIGPLVFGIPGLAIGPIIVAT 318 Query: 338 IAVIWKESIMAIKENK 353 + I K + K+N Sbjct: 319 VYAIHKVRRLIEKKNN 334 >gi|269966936|ref|ZP_06181008.1| putative lipoprotein [Vibrio alginolyticus 40B] gi|269828419|gb|EEZ82681.1| putative lipoprotein [Vibrio alginolyticus 40B] Length = 361 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 48/338 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F K + A+++ V + + ++PLLF+F Sbjct: 32 YINSIVMAFIISLLMFPIHEWFEQKIPKHPNMAALLSCVVLTFIIVIPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP---QSLKILSETFLKTNGI 146 +V + + +Q+ W+++ GG+ HP + L I++E +L + I Sbjct: 85 AAIVQQGSVFSQNTY---NWVTN--GGI------QDIFQHPFVIKGLAIVNE-YLPFDKI 132 Query: 147 D------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I +FA+ FG + ++ ++ M+ LFF RD ++ Sbjct: 133 EPKAIAEKIGQFATSFGSNLVAISAKILGDATNFLMNFFLMLFVLFFLLRD----HDKII 188 Query: 190 SLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S H+ P + RI + +V +S +G + AI +GL G WLAG P + G Sbjct: 189 SAIRHILPLSRSQEDRILTEIEQVSKSAVMGSFMTAIAQGLAGGIGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YL + G++ A L +W + + +D LRP L+ G Sbjct: 248 MMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVVVGSIDNLLRPLLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 345 >gi|255534118|ref|YP_003094490.1| hypothetical protein Phep_4237 [Pedobacter heparinus DSM 2366] gi|255347102|gb|ACU06428.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 350 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 8/169 (4%) Query: 197 PAYWKKISRIVPKVIRSTF---LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P + R ++ +T+ LG IA+ +G +L +++ G V GVIT ++ Sbjct: 176 PFRAQNAQRFAEEMRNTTYANVLGQGFIAMVQGSLLSLCFFVLGYTDPVFWGVITTFISF 235 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G P+ F ++ + GN F + ++G + + +D LR + + + T Sbjct: 236 VPLLGPPVIFVPAALIQIANGNNFAGWAMLIFGFVVIINIDNVLRFMIAKKVGNIHPIIT 295 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMA---LIAVIWKESIMAIKENKEKISS 358 G+V GV G+LGL GP+L++ L+ I++ S MA E E+I + Sbjct: 296 VIGVVIGVPLFGILGLVFGPLLLSYFILLIKIYETSAMA-SERLERIKT 343 >gi|49611311|emb|CAG74758.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 396 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 75/357 (21%), Positives = 148/357 (41%), Gaps = 30/357 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ LF+ Sbjct: 48 ITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLVMTLLLILLFV 107 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VP+ L + L+S P WL+ IP + +L+ Sbjct: 108 VPIAVLVSSVIDNSSALMSWGSRQENLSPPTLEWLTSIP--LVGEKLFNSW--------- 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMI-------------FLDYCLSIIFMIIALFFFYRDGF 182 + L++ G + FG FL +C S++ + AL ++ G Sbjct: 157 --QALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGRFLMHC-SLMLIFSALLYY--KGE 211 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++++ + L + + IR+ LG+ + AI + ++ G L+G+P Sbjct: 212 AVAKAVRHFAIRLGRERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTT 271 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ + + G + I+L G+ T L +W + + +D +RP L+ Sbjct: 272 LLTVLMFLCCLAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSCV-VGTIDNVIRPMLIR 330 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 331 MGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNLLSVN 387 >gi|289573754|ref|ZP_06453981.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis K85] gi|289538185|gb|EFD42763.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis K85] Length = 355 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 141 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 196 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 197 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAWGIFVLLWHL 256 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 257 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 308 >gi|91228319|ref|ZP_01262248.1| putative permease [Vibrio alginolyticus 12G01] gi|91188135|gb|EAS74438.1| putative permease [Vibrio alginolyticus 12G01] Length = 347 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 48/338 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F K + A+++ V + + ++PLLF+F Sbjct: 18 YINSIVMAFIISLLMFPIHEWFEQKIPKHPNMAALLSCVVLTFIIVIPLLFVF------- 70 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP---QSLKILSETFLKTNGI 146 +V + + +Q+ W+++ GG+ HP + L I++E +L + I Sbjct: 71 AAIVQQGSVFSQNTY---NWVTN--GGI------QDIFQHPFVIKGLAIVNE-YLPFDKI 118 Query: 147 D------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I +FA+ FG + ++ ++ M+ LFF RD ++ Sbjct: 119 EPKAIAEKIGQFATSFGSNLVAISAKILGDATNFLMNFFLMLFVLFFLLRD----HDKII 174 Query: 190 SLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S H+ P + RI + +V +S +G + AI +GL G WLAG P + G Sbjct: 175 SAIRHILPLSRSQEDRILTEIEQVSKSAVMGSFMTAIAQGLAGGIGMWLAGFPG-LFWGT 233 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YL + G++ A L +W + + +D LRP L+ G Sbjct: 234 MMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVIVGSIDNLLRPLLMQGSA 293 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 294 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 331 >gi|197121208|ref|YP_002133159.1| hypothetical protein AnaeK_0794 [Anaeromyxobacter sp. K] gi|196171057|gb|ACG72030.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 364 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 8/183 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + L M+IALFFF DG Q+L + + P + +V R+T + A Sbjct: 161 FVLQTAMMLIALFFFLVDG----QRLIAWVDARVPLRAGQFRTLVEDFRRTTLSVVAATA 216 Query: 223 IGEGLVLGSA---YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 G+ +A Y++A P+ + L V+T ++A+IP GA V+ G+ + Sbjct: 217 ATAGIQTVTALAGYFIARAPNPIFLAVLTLLVALIPAVGATAMVLVVAALQFATGHTVSG 276 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L +WGA + +VD RP+L+ G + L FF L+GG+ G +GL +GP++ + Sbjct: 277 IFLAVWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAAFGGIGLILGPLVATFL 336 Query: 339 AVI 341 + Sbjct: 337 VTV 339 >gi|119358137|ref|YP_912781.1| hypothetical protein Cpha266_2369 [Chlorobium phaeobacteroides DSM 266] gi|119355486|gb|ABL66357.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides DSM 266] Length = 357 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 84/322 (26%), Positives = 147/322 (45%), Gaps = 38/322 (11%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T + + I+ +++FI V + ++ F +L A I P+Y F + + + Sbjct: 2 DTRQSNRTILLVIVLFISAVFIAMIRYFLMALLMAAIFSALLMPLYHRFERWFQGNKSLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN--QHGIPVPRWLSDIPGGMWAS 120 A + ++++ + ++P L L GM+ + L + A Q I P G ++ Sbjct: 62 AGVTILALVLMVLLPSLALI--GMVLAQALRLSRLAAPWVQQQIHEP--------GAFSR 111 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSII-------F 169 L T L + L++ E LK G FA G + L + LS + F Sbjct: 112 TLET--LPYYHELEVYREDILKKIG-----EFAGTAGNMLLGAISSFTLSAVNELFLLFF 164 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEG 226 + +FFF +DG I LD + +L P SR++ K V R+T G ++ + +G Sbjct: 165 FLYTMFFFLKDGREI---LDKMLSYL-PLTEGVKSRLLEKFLSVTRATLKGSVVVGLVQG 220 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A LAG+ S + G I +++ IP G+P+ + IYLL+ G A + L+ Sbjct: 221 TLAGLALHLAGIDSALFWGAIMTLLSFIPVLGSPLVWVPAVIYLLLIGQYPQALGVLLFC 280 Query: 286 AIELFIVDKTLRPFLVGGPIKL 307 +I + +D LRP L+G K+ Sbjct: 281 SIIVGQIDNILRPILIGRDTKM 302 >gi|161501878|ref|YP_049952.2| putative inner membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 370 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 77/357 (21%), Positives = 149/357 (41%), Gaps = 30/357 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ LF+ Sbjct: 22 ITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLVMTLLLILLFV 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VP+ L + L+S P WL+ IP + K + Q+L Sbjct: 82 VPIAVLVSSVIDNSSALMSWGSRQENLSPPTLEWLTSIP------LVGEKLFNSWQAL-- 133 Query: 136 LSETFLKTNGIDFIPRFASRFGMI-------------FLDYCLSIIFMIIALFFFYRDGF 182 L++ G + FG FL +C S++ + AL ++ G Sbjct: 134 -----LQSGGSGLFAKVQPYFGKTATWLVAQAAHVGRFLMHC-SLMLIFSALLYY--KGE 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++++ + L + + IR+ LG+ + AI + ++ G L+G+P Sbjct: 186 AVAKAVRHFAIRLGRERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTT 245 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ + + G + I+L G+ T L +W + + +D +RP L+ Sbjct: 246 LLTVLMFLCCLAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSCV-VGTIDNVIRPMLIR 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 305 MGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNLLSVN 361 >gi|260204344|ref|ZP_05771835.1| hypothetical protein MtubK8_08558 [Mycobacterium tuberculosis K85] Length = 342 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ +AL ++ QL+ LGE + Y +K+ +V R T G +IA +G+ Sbjct: 128 VYVFVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMV----RGTVNGQFVIAACQGV 183 Query: 228 VLGSAYWLAGVPSHVAL-GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ ++AG + ++ +++IP G I I ++ GNI + LW Sbjct: 184 AGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAWGIFVLLWHL 243 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 244 LVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 295 >gi|239905742|ref|YP_002952481.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239795606|dbj|BAH74595.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 394 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 5/183 (2%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + + +++ LF+F + + L L L + ++++ + V RS +G Sbjct: 204 FAAQTVMLVLFLFYFLSQAEQVVRGLRLL-SPLRRSQEQELTERLKTVTRSILVGGAAAG 262 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATC 280 + +GL WL G+ + G + + ++IP G I A+ +YLL G + A Sbjct: 263 LSQGLATMLGLWLVGI-DPLFWGFVALLASLIPVVGTTLIHVPAI-VYLLSLGAMGKAVF 320 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L LW + + VD +RPF + +LP L F ++GGV G LGL GPV M+L V Sbjct: 321 LTLWWLVVVSTVDNVVRPFFIRDGAQLPLLLIFVAIIGGVLLFGPLGLIYGPVSMSLCLV 380 Query: 341 IWK 343 +++ Sbjct: 381 VFQ 383 >gi|283785082|ref|YP_003364947.1| putative outer membrane protein [Citrobacter rodentium ICC168] gi|282948536|emb|CBG88126.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 370 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 6/133 (4%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 R+ LG+ + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L Sbjct: 212 RAVALGVVVTALVQAVLGGIGLAISGVPYATLLTVVMILSCLVQLGPLPVLVPAI-IWLY 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G T L +W + + +D +RP L+ LP + G++GG+ G++GLFI Sbjct: 271 WSGETTWGTVLLVWSCV-VGTLDNVIRPVLIRMGADLPLILILSGVIGGLIAFGMIGLFI 329 Query: 331 GPVLMALIAVIWK 343 GPVL+ AV W+ Sbjct: 330 GPVLL---AVTWR 339 >gi|2960002|emb|CAA76498.1| outer membrane protein [Campylobacter jejuni] Length = 364 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 18/181 (9%) Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEG 226 ++I +F+F+ + + +L + + P K++ + V V+ M I+AI +G Sbjct: 170 VLICVFYFFANLYG--TELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQG 227 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + G G + +GVI A+ ++IP GGA I + VS+Y N+ +A +F++ Sbjct: 228 ALFGLITIFYGYDG-ILMGVIFAVSSLIPAIGGALI-YMPVSLYEFASNNLNSALVIFIY 285 Query: 285 GAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 I + FI D ++P LV P K+ L F ++ G+ T G G+ +GP ++ Sbjct: 286 SVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAIL 345 Query: 336 A 336 Sbjct: 346 T 346 >gi|303238314|ref|ZP_07324849.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302594018|gb|EFL63731.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 355 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 44/358 (12%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + +R MI+ I+ LY ++ L I+ + + I SFIS K S F+ V Sbjct: 8 LKKKSTIRIMILAILFFLLYLMRDMMNLFLLTFIMAYLMYRI-QSFISSK--ISKFVKVG 64 Query: 66 ATVSVMCLFI--VPLLFLFYYGML-----EMKELVSKVV-LANQHGIPVPRWLSDIPGGM 117 V +CL++ V L L Y L E K+++ +V+ Q+ + ++L Sbjct: 65 NRVVTICLYMIFVFLAILGIYNFLPLVIQESKDVIDQVISYYTQNEAAIEKYL------- 117 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L ++ + K + + G+D + + AS G + D ++I I++LFF Sbjct: 118 -LSALKKFNIDNLDISKYVGK------GLDILAKSASSIGKLSFDMFIAI---ILSLFFL 167 Query: 178 YRDG----FSISQQLDSLG--EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 F++ + S+ + + KK KVI + FL I +I +VL Sbjct: 168 LERTRIARFTLKFKTSSISVFYNEIEYFGKKFINSFGKVIEAQFLIALINSILSTIVLS- 226 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + G + LG++ ++ +IP G IS +S+ G + T LF+WG I + Sbjct: 227 ---ILGFDKVIGLGIMIFVLGLIPVAGVIISLVPLSLIAFNTGGV--KTVLFVWGMIAVL 281 Query: 291 --IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKES 345 + L P L+ +LP TF L+ G + GL IG PV M ++ ++ +S Sbjct: 282 HALEAYVLNPKLMSSKTELPVFYTFIILLIGEHFFKVWGLIIGIPVFMFILDLVEVKS 339 >gi|295096092|emb|CBK85182.1| Predicted permease [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 371 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ + ++ G ++GVP V+ + + G + I+L Sbjct: 212 RAVALGVVVTALVQAVLGGIGLAISGVPYATIFTVVMLMTCLAQLGPLLVLVPCIIWLYW 271 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D +RP L+ LP + G++GG+ G++GLFIG Sbjct: 272 TGDTTWGTVLLVWSCV-VGTMDNVIRPLLIRMGADLPLILILSGVIGGLIAFGMIGLFIG 330 Query: 332 PVLMALIAVIWK 343 PVL+ AV W+ Sbjct: 331 PVLL---AVTWR 339 >gi|313887473|ref|ZP_07821162.1| putative membrane protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923115|gb|EFR33935.1| putative membrane protein [Porphyromonas asaccharolytica PR426713P-I] Length = 401 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 29/293 (9%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLL--FLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + +K + A + TV + F++PLL L + + S VL Q V + Sbjct: 64 VERKRWGRNWAASLLTVEAIFFFLIPLLGIVLMLIDLFSAFDPESLNVLTTQAQDVVKQV 123 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 +W++E K S SL + FL+ F Sbjct: 124 EERFGIEIWSNENIQKLTSFSTSL---------------VKGLLQGMSSFFLN-----AF 163 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +I+ L +F G+ Q ++ E L P K +S +++S +G+ ++AI +G Sbjct: 164 IILFLLYFMLRGYD---QFEAAVEELLPFTECNKKTVSNETISIVKSNAIGIPLLAIVQG 220 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + Y + GV + + V+T +IP G + + +++ + I G+ NA L L+G Sbjct: 221 VFAYIGYLIFGVDNALLFAVLTTFTTIIPVLGTMLVWIPIAVVMGINGDWLNAILLALYG 280 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I + VD R L + L T FG+ G+ G G+ GP++++LI Sbjct: 281 FIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFWGVIFGPLILSLI 333 >gi|183221243|ref|YP_001839239.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911334|ref|YP_001962889.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776010|gb|ABZ94311.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779665|gb|ABZ97963.1| Conserved hypothetical protein; putative membrane protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 369 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 76/146 (52%), Gaps = 4/146 (2%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ R + + IR+ +G I++ +G ++ V + L I I ++IP G Sbjct: 212 ERLGRRIEEAIRTVMMGNMFISLLQGALVYFLLLFTSVSNKFLLSSIATIFSLIPVVGTS 271 Query: 260 ISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL-PFLPTFFGLV 317 + + + +Y+ L++ N + + GA I++ ++P ++ +K PFL F L+ Sbjct: 272 VVWFPIGLYMGLVQENWTGSVLFMIAGAASYLILENFVKPKILDKKLKTHPFL-IFLSLI 330 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 GG++ G+ G+ IGP+ + L+ ++W Sbjct: 331 GGLQEFGVAGIIIGPMALTLVIILWD 356 >gi|154491658|ref|ZP_02031284.1| hypothetical protein PARMER_01269 [Parabacteroides merdae ATCC 43184] gi|154087899|gb|EDN86944.1| hypothetical protein PARMER_01269 [Parabacteroides merdae ATCC 43184] Length = 341 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K + + ++ S +G+ ++AI +GL+ YW+ VPS G +T +IP G Sbjct: 187 KNVLNEINMIVTSNAIGIPLLAIIQGLIALLGYWIFDVPSPFLFGFLTCFATIIPVVGTA 246 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + +++Y+ + G+ NA L + I + VD +R L L T FG++ G Sbjct: 247 LVWLPLALYMTLTGDWVNAAGLTAYALIIITNVDNLIRFILQKKMADTHPLITIFGVIIG 306 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GP+L+++ Sbjct: 307 LSLFGFMGIIFGPLLISI 324 >gi|269961961|ref|ZP_06176316.1| putative lipoprotein [Vibrio harveyi 1DA3] gi|269833284|gb|EEZ87388.1| putative lipoprotein [Vibrio harveyi 1DA3] Length = 409 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 152/337 (45%), Gaps = 46/337 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F SK +++++ V + + ++PLLF+F Sbjct: 80 YVNSIVMAFIISLLMFPIHEWFESKMPNHKNLVSLLSCVVLTFIIVIPLLFVF------- 132 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + + +Q+ +W+++ GG+ HP +K L+ +L + I+ Sbjct: 133 AAIVQQGSVFSQNTY---KWVTN--GGI------QDIFQHPWVVKGLALVNEYLPFDKIE 181 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 182 PQAIAEKIGQFATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 237 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + KI + +V +S +G + AI +G G WLAG P + G + Sbjct: 238 AMRHILPLSRSQEDKILTEIEQVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTM 296 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G+ A L +W + + +D LRP L+ G Sbjct: 297 MGFASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLTVWSVVVVGSIDNLLRPLLMQGSAG 356 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 357 MNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 393 >gi|294809934|ref|ZP_06768608.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|294442780|gb|EFG11573.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 176 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T +IP G Sbjct: 17 QEVIHEINMIVRSNAIGIPLLAIIQGGVATIGYLLFGAPNILLLGFLTCFATIIPMVGTA 76 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+ YL I G+ FNA + +GAI + D +R L L T FG+V G Sbjct: 77 LVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADTHPLITIFGVVIG 136 Query: 320 VRTMGLLGLFIGP 332 + G +G+ GP Sbjct: 137 LPLFGFMGVIFGP 149 >gi|254230483|ref|ZP_04923858.1| putative permease [Vibrio sp. Ex25] gi|262393362|ref|YP_003285216.1| putative permease [Vibrio sp. Ex25] gi|151936989|gb|EDN55872.1| putative permease [Vibrio sp. Ex25] gi|262336956|gb|ACY50751.1| predicted permease [Vibrio sp. Ex25] Length = 361 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 155/338 (45%), Gaps = 48/338 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +P++ F K + A+++ V + + ++PLLF+F Sbjct: 32 YINSIVMAFIISLLMFPVHEWFERKIPKHPNMAALLSCVVLTFIIVIPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP---QSLKILSETFLKTNGI 146 +V + + +Q+ W+++ GG+ HP + L I++E +L + I Sbjct: 85 AAIVQQGSVFSQNTY---NWVTN--GGI------QDIFQHPFVIKGLAIVNE-YLPFDKI 132 Query: 147 D------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I +FA+ FG + ++ ++ M+ LFF RD ++ Sbjct: 133 EPKAIAEKIGQFATSFGSNLVAISAKILGDATNFLMNFFLMLFVLFFLLRD----HDKII 188 Query: 190 SLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S H+ P + RI + +V +S +G + AI +GL G WLAG P + G Sbjct: 189 SAIRHILPLSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YL + G++ A L +W + + +D LRP L+ G Sbjct: 248 MMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVVVGSIDNLLRPLLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 345 >gi|305431582|ref|ZP_07400756.1| acid membrane antigen A [Campylobacter coli JV20] gi|304445389|gb|EFM38028.1| acid membrane antigen A [Campylobacter coli JV20] Length = 347 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 72/326 (22%), Positives = 139/326 (42%), Gaps = 39/326 (11%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 KGF ++ A ++ + + F+S +++ T ++ LF P F Y M+ Sbjct: 24 KGFLLVIIIASLMAVATSNANAKFLSLTNGRKFLASMLTTACMVLLFFAP----FVYAMI 79 Query: 88 EMKELVSK--VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+ + + + L Q V + +P + E K L +S+ L Sbjct: 80 ELAKALKNFDINLVTQTLNYVKNYQFTLPESLSFLEPKIKEFLASIDLNSISKQIL---- 135 Query: 146 IDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +AS F G FL I ++I +F+F+ + + +L + + P ++ Sbjct: 136 -----NYASSFTKSGAKFL-----IDMVLICIFYFFANLYG--TELVIYIKSVIPIDKQE 183 Query: 203 ISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + I V V+ M IIAI +G + G + + +GVI A+ ++IP G Sbjct: 184 LDDILSEVGNVMAVVLYSMIIIAILQGALFSIIAMFYGYDA-ILMGVIFAVSSLIPALGG 242 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPF 309 + + +S+Y ++ +A +F++ + + FI D ++P LV P K+ Sbjct: 243 ALVYIPISLYEFASSSLGSALVIFIYSVVVISFIADTLVKPLIIKWINEKLVKTPAKINE 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLM 335 L F ++ G+ T G G+ +GP ++ Sbjct: 303 LLIFLAMIAGISTFGFWGIILGPAIL 328 >gi|113868389|ref|YP_726878.1| permease [Ralstonia eutropha H16] gi|113527165|emb|CAJ93510.1| predicted permease [Ralstonia eutropha H16] Length = 367 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 10/142 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH--VALGVITAIMAMIPGGA 258 ++I+ + IR+ G+ IA + L++G + + GVP+ +A+ V+ +A +P A Sbjct: 207 QRIATLCTATIRAVAQGVVGIAFIQMLLIGIGFVIKGVPAAGVLAMAVLLLGIAQLP--A 264 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLPFLPTFFG 315 + V IY+ AT +F AI +F+ D L+P L+G + +P G Sbjct: 265 TLITVPVIIYVFATEGASVATIVF---AIYVFVAGLADNVLKPLLLGRGVDVPMPVVLIG 321 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 +GG+ T G++GLFIGPV++A+ Sbjct: 322 ALGGMVTGGVIGLFIGPVVLAV 343 >gi|330946225|gb|EGH47411.1| hypothetical protein PSYPI_36155 [Pseudomonas syringae pv. pisi str. 1704B] Length = 226 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 7/202 (3%) Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSL 133 PL++L + +++ + G+P P +WL+ IP G LWT + Sbjct: 5 APLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAF 64 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G ++I +++ G L+ LSI+F FFFYRDG ++ + SL E Sbjct: 65 MATLKPHLGQVG-NWILARSAQIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLE 119 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + +V ++ G+ A + ++ + +AG+P + LG++T + ++ Sbjct: 120 RLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSL 179 Query: 254 IPGGAPISFTAVSIYLLIKGNI 275 IP G P+ + + +L+ +G + Sbjct: 180 IPMGPPLVWLPATAWLVWQGGV 201 >gi|94969196|ref|YP_591244.1| hypothetical protein Acid345_2169 [Candidatus Koribacter versatilis Ellin345] gi|94551246|gb|ABF41170.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 354 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 27/344 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + L LK F + +II +P Y + AV+ T+ ++ L Sbjct: 26 LIALLALTCFVILKAFIPLLAWGVIIATAGYPGYRKLAAALGGREKLAAVLCTLILLSLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHP-QS 132 ++P + L + + S+V N P P + P G +++WT + Q+ Sbjct: 86 VIPAVLLAGTLTDGARSIASQVQSGNFRIPPPPAKVQGWPLIGKPLNKVWTTASTDATQA 145 Query: 133 LKILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L +S K + P S + G L + LSI+ L R SQ++ Sbjct: 146 LNKVSPVIQK-----YAPTLLSAGAKLGGTLLQFILSIVLAGF-LLASSRGNAEFSQKIF 199 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI-- 247 +F + + +RS G+ +A+ + ++ + + G+P ++ Sbjct: 200 ---RRIFREKGDEFETLTANTVRSVTNGIVGVALIQTILASLGFLVVGLPGAGMWSLLFF 256 Query: 248 --TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + P A +I IF C+F+ ++D L+P L+G Sbjct: 257 VAAVLQVGVVVLLPAVAFAFTITSTTPAVIFLVWCMFVG------VIDNVLKPMLLGRGN 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESI 346 ++P L F G++GG MG +GLFIG +++++ + +IW E + Sbjct: 311 QVPTLVVFLGVIGGFIAMGTIGLFIGAIILSVGYKLFLIWLEDV 354 >gi|261339537|ref|ZP_05967395.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] gi|288318351|gb|EFC57289.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] Length = 371 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ + ++ G ++GVP V+ + + G + I+L Sbjct: 212 RAVALGVVVTALVQAILGGIGLAVSGVPYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYW 271 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D +RP L+ LP + G++GG+ G++GLFIG Sbjct: 272 TGDTTWGTVLLVWSCV-VGTMDNVIRPILIRMGADLPLILILSGVIGGLIAFGMIGLFIG 330 Query: 332 PVLMALIAVIWK 343 PVL+ AV W+ Sbjct: 331 PVLL---AVTWR 339 >gi|21228773|ref|NP_634695.1| hypothetical protein MM_2671 [Methanosarcina mazei Go1] gi|20907289|gb|AAM32367.1| hypothetical protein MM_2671 [Methanosarcina mazei Go1] Length = 401 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 16/240 (6%) Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL---FFFYRDGFSI 184 +HP L +L T +D++P+ + I D + II +I+ + ++ + +I Sbjct: 118 THPGKLTESIGGYLNTLVMDYVPQIQNNIVQISTDLSILIIELIVIVVLTYYLLVESETI 177 Query: 185 SQQLDSLGEHLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L L FP +K+ R + + ++ F+ + + G++ G YW+ GVP Sbjct: 178 AAELPGL----FPD--RKVGVVFLRELNHIYQNLFVVYFLTCLATGVIGGILYWVLGVPY 231 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRP 298 + G++T IMA++P GA + +++Y ++ N F A L G + L I+ D +RP Sbjct: 232 PLIWGIVTFIMALLPVVGAGTVYGLLALYYVLIQNYFTAGALVFLGIVFLNIIPDFVIRP 291 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA-LIAVIWKESIMAIKENKEKIS 357 L + T V +G +G+ IGP+ L+AV + I+ +E+ S Sbjct: 292 KLARSRAAIHPAITLLAFAAPVFVLGPVGIIIGPLTYGFLLAVFRTKKIIGASPVREESS 351 >gi|300775462|ref|ZP_07085324.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506202|gb|EFK37338.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 359 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 1/125 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 K+I + +G+ ++A+G+G+V Y + G P V L +TA ++IP G I + V I Sbjct: 196 KLIMANAIGIPVVAVGQGIVSLIGYIIFGAPGPVLLFALTAASSVIPVVGTAIVYVPVCI 255 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +++ +GN L + + + + D LR L+ + L T FG++ G+ G +G Sbjct: 256 FMIAEGNTGPGLGLAAYCVVVVGLTDNLLRFTLLKKLENIHPLNTVFGIIMGMNLFGFMG 315 Query: 328 LFIGP 332 L GP Sbjct: 316 LIFGP 320 >gi|253997450|ref|YP_003049514.1| hypothetical protein Mmol_2085 [Methylotenera mobilis JLW8] gi|253984129|gb|ACT48987.1| protein of unknown function UPF0118 [Methylotenera mobilis JLW8] Length = 351 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 161/337 (47%), Gaps = 10/337 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+N I R + +++V F L F A +L A II +WP+Y + A Sbjct: 1 MINTNQIARIASISLLIVGCVFVLYPFMAAMLFAAIICVFTWPLYQRVWLLFGKRDMLAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPG-GMWASE 121 + T+ ++ I+P+ +L ++ + Q PV P WL ++P G +E Sbjct: 61 AMMTLLLLFAMIMPMAYLAANLADSATLMLDEAQAVLQSMQPVAPTWLKNLPIIGESLAE 120 Query: 122 LWTKHL-SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + SH + + +L++ + I F + + + + ++ ++ FFFYRD Sbjct: 121 SWQRVMASHEELMHLLNQY------AEPIRVFLLKVVQMVMGGFVQLVLVVFVAFFFYRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + S+ L +++ + ++ LG+ A+ + V +WLAG P+ Sbjct: 175 GTKLVAAVTSMVRRLGGELGQEMLVLSCNTVKGVMLGVFGTALAQASVGLFGFWLAGAPA 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L + T +++IP G P+ + S++L G+ A L ++G + + +VD ++P L Sbjct: 235 PLLLALATFFLSVIPVGPPLVWGGASLWLFNHGDQGWAIFLLVYGLLVISMVDNIVKPIL 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + LP L G++GG+ G +G+F+GP L+A+ Sbjct: 295 ISHSSHLPLLLVVLGVLGGILAFGFIGIFLGPTLLAV 331 >gi|222824271|ref|YP_002575845.1| acid membrane antigen A [Campylobacter lari RM2100] gi|222539492|gb|ACM64593.1| acid membrane antigen A [Campylobacter lari RM2100] Length = 347 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 74/340 (21%), Positives = 147/340 (43%), Gaps = 41/340 (12%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+FI+ L+ K F + A ++ ++ + F+S + A T ++ LF Sbjct: 12 ILFILFWVLFLFKPFLMNIAIASLMAVSTSNVNVKFLSIFKGKKVIAAAATTTFMLALFF 71 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +P F Y ++E+ + S ++ H + +P + E K L Sbjct: 72 IP----FVYAIIELAKAASGFNISYIHNTIEYFKNYSLHLPESLSFIEPKIKEALASIDL 127 Query: 134 KILSE---TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +S+ T+L + A++FG FL + +I +F+F+ + + QL Sbjct: 128 NSISKDVLTYLSS---------ATKFGTKFLTDMV-----LICVFYFFANLYG--AQLIG 171 Query: 191 LGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + P ++ I V V+ F M + AI +G++ G + + +G++ Sbjct: 172 YIKTIVPMKKEETQGILSEVSNVMSVVFYSMVLNAILQGVLFAIITKFYGYDA-ILMGIL 230 Query: 248 TAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF----- 299 ++IP GGA I + VS+Y N+ A +F++ + + FI D ++P+ Sbjct: 231 FCFSSLIPVVGGALI-YVPVSLYEFANNNLSGALVIFIYSVVMISFIADTLVKPYIIKWI 289 Query: 300 ---LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 LV P ++ L FF ++ G+ + G G+ +GP ++ Sbjct: 290 NEKLVQIPTQINELLIFFAMIAGISSFGFWGIILGPAILT 329 >gi|227327021|ref|ZP_03831045.1| putative inner membrane protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 369 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 79/358 (22%), Positives = 151/358 (42%), Gaps = 32/358 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ LFI Sbjct: 22 ITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLVMTLLLILLFI 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VP+ L + L+S P WL+ IP + K + Q+L Sbjct: 82 VPIAVLVSSVVDNSSALMSWGARQENFSPPTLEWLTSIP------LVGEKLFNSWQAL-- 133 Query: 136 LSETFLKTNGIDFIPRFASRFGMI-------------FLDYCLSIIFMIIALFFFYRDGF 182 L++ G + FG FL +C S++ + AL ++ G Sbjct: 134 -----LQSGGSGLFAKVQPYFGKTATWLVAQAAHVGRFLMHC-SLMLIFSALLYY--KGE 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++++ + L + + IR+ LG+ + AI + ++ G L+G+P Sbjct: 186 AVAKAVRHFAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTT 245 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ + + G P+ A+ I+L G+ T L +W + +D +RP L+ Sbjct: 246 LLTVLMFLCCLAQLGPLPVLIPAI-IWLYWTGDTTWGTILLVWSCF-VGTIDNIIRPVLI 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++G+FIGPV++A+ + + I E + +S N Sbjct: 304 RMGADLPMLLILSGVIGGLLAFGMIGIFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 361 >gi|57168276|ref|ZP_00367415.1| acid membrane antigen A Cj1363 [Campylobacter coli RM2228] gi|57020650|gb|EAL57319.1| acid membrane antigen A Cj1363 [Campylobacter coli RM2228] Length = 347 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 39/326 (11%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 KGF ++ A ++ + + F+S +++ T ++ LF P F Y M+ Sbjct: 24 KGFLLVIIIASLMAVATSNANAKFLSLTNGRKFLASMLTTACMVLLFFAP----FVYAMI 79 Query: 88 EMKELVSK--VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+ + + + L Q V + +P + E K L +S+ L Sbjct: 80 ELAKALKNFDINLVTQTLNYVKNYQFTLPESLSFLEPKIKEFLASIDLNSISKQIL---- 135 Query: 146 IDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +AS F G FL I ++I +F+F+ + + +L + + P ++ Sbjct: 136 -----NYASSFTKSGAKFL-----IDMVLICIFYFFANLYG--TELVIYIKSVIPIDKQE 183 Query: 203 ISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + I V V+ M IIAI +G + G + + +GVI A+ ++IP G Sbjct: 184 LDDILSEVGNVMAVVLYSMIIIAILQGALFSIIAMFYGYDA-ILMGVIFAVSSLIPALGG 242 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPF 309 + + +S+Y + +A +F++ + + FI D ++P LV P K+ Sbjct: 243 ALVYIPISLYEFASSGLGSALVIFIYSVVVISFIADTLVKPLIIKWINEKLVKTPAKINE 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLM 335 L F ++ G+ T G G+ +GP ++ Sbjct: 303 LLIFLAMIAGISTFGFWGIILGPAIL 328 >gi|296102735|ref|YP_003612881.1| putative inner membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057194|gb|ADF61932.1| putative inner membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 371 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ + ++ G ++GVP V+ + + G + I+L Sbjct: 212 RAVALGVVVTALVQAVLGGIGLAISGVPYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYW 271 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D +RP L+ LP + G++GG+ G++GLFIG Sbjct: 272 TGDTTWGTVLLVWSCV-VGTMDNVIRPILIRMGADLPLILILSGVIGGLIAFGMIGLFIG 330 Query: 332 PVLMALIAVIWK 343 PVL+ AV W+ Sbjct: 331 PVLL---AVTWR 339 >gi|91215955|ref|ZP_01252924.1| putative transmembrane protein [Psychroflexus torquis ATCC 700755] gi|91185932|gb|EAS72306.1| putative transmembrane protein [Psychroflexus torquis ATCC 700755] Length = 354 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K I++ K +++ +G+ ++A+ +G++ YW+ GVP + VIT I +MIP G Sbjct: 183 KLIAKESAKKVKANAIGIPLVALFQGIISLIGYWIFGVPEAMFWFVITTIGSMIPFVGTA 242 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I F V++ L +G +A + L+G + + D +R ++ L T G++ G Sbjct: 243 IGFIPVTLLLYYQGETASAIGVLLYGFVIVGSSDNIVRLLVLKKMANEHPLITLIGVIIG 302 Query: 320 VRTMGLLGLFIGP 332 V G +GL GP Sbjct: 303 VPLFGFIGLIFGP 315 >gi|317485026|ref|ZP_07943908.1| permease [Bilophila wadsworthia 3_1_6] gi|316923561|gb|EFV44765.1| permease [Bilophila wadsworthia 3_1_6] Length = 353 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%) Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 +G + G + +A VP G+I A +A IP G + + V I+L + G+ L + Sbjct: 226 QGFLCGVGFAIAEVPQPAFWGLIAAFVAPIPFVGTALVWLPVCIWLWLTGSTVACIGLAI 285 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 W A+ + VD LRPF + I + ++ G+ G +G+F GPVL+A+ Sbjct: 286 WCALVVAGVDNLLRPFFLKTGIDASVVTLILSILCGLAAFGPVGVFAGPVLVAVAIQAGN 345 Query: 344 ESIMAIKE 351 ES + K Sbjct: 346 ESTLCRKH 353 >gi|170690238|ref|ZP_02881405.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144673|gb|EDT12834.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 381 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 14/328 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 LI+ T +P++ +A + + + +VP +L + + E V V Sbjct: 46 GLILAITLYPLHIRLRRSLRNRDGLVATLIVLVAFGVILVPS-YLLGVAVADSIEHVMAV 104 Query: 97 VLANQHGIPVPRWLSDIPG----GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V + IP P + G G + W + + L LK G + Sbjct: 105 VKSGSFRIPPPA--ESVAGWPLVGQHVHDFWQQASTDLTGLAQRFAPQLKEAGRALLGTV 162 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 G L + +++I I + + R G +QQ+ S P +I+ + IR Sbjct: 163 TG-LGAGLLIFFIALIVAGILMAYGER-GHRSAQQIAS--RISGPERGAQITDLCTATIR 218 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + G+ IA + L++G + + G+P+ L + ++ ++ A + V ++++ Sbjct: 219 AVAQGVVGIAFIQMLLIGGGFVVMGIPAAGLLALGVLLIGIMQLPATLITLPVIAFVMLT 278 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + AT F + D L+P L+G + +P G +GG+ T G++GLFIGP Sbjct: 279 EGVSTATIAFSAYVFVAGLADNVLKPLLLGRGVAVPMPVVLIGALGGMVTGGVIGLFIGP 338 Query: 333 VLMAL-IAVIWKESIMAIKENKEKISSN 359 V++A+ + W+ + + E+I N Sbjct: 339 VMLAVGYELFWRW--VKDQPQAERIDEN 364 >gi|28899250|ref|NP_798855.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153838395|ref|ZP_01991062.1| putative permease [Vibrio parahaemolyticus AQ3810] gi|260362174|ref|ZP_05775164.1| putative permease [Vibrio parahaemolyticus K5030] gi|260879054|ref|ZP_05891409.1| putative permease [Vibrio parahaemolyticus AN-5034] gi|260895929|ref|ZP_05904425.1| putative permease [Vibrio parahaemolyticus Peru-466] gi|260903440|ref|ZP_05911835.1| putative permease [Vibrio parahaemolyticus AQ4037] gi|28807474|dbj|BAC60739.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149748202|gb|EDM59061.1| putative permease [Vibrio parahaemolyticus AQ3810] gi|308085368|gb|EFO35063.1| putative permease [Vibrio parahaemolyticus Peru-466] gi|308089577|gb|EFO39272.1| putative permease [Vibrio parahaemolyticus AN-5034] gi|308106571|gb|EFO44111.1| putative permease [Vibrio parahaemolyticus AQ4037] gi|308111062|gb|EFO48602.1| putative permease [Vibrio parahaemolyticus K5030] Length = 361 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 46/337 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +P++ F K + +++ V + + ++PLLF+F Sbjct: 32 YINSIVMAFIISLLMFPVHEWFERKMPKHKNSASLLTCVVLTFIIVIPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + + +Q+ +W+++ GG+ HP +K LS +L + I+ Sbjct: 85 AAIVQQGSVFSQNTY---KWVTN--GGI------QDIFQHPWVIKGLSIVNEYLPFDKIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PKAIAEKIGQFATTFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + RI + +V +S +G + AI +GL G WLAG P + G + Sbjct: 190 AIRHILPLSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G++ A L W + + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTAWSVVIVGSIDNLLRPLLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 309 MNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 345 >gi|153835384|ref|ZP_01988051.1| putative permease [Vibrio harveyi HY01] gi|156975685|ref|YP_001446592.1| hypothetical protein VIBHAR_03420 [Vibrio harveyi ATCC BAA-1116] gi|148868086|gb|EDL67255.1| putative permease [Vibrio harveyi HY01] gi|156527279|gb|ABU72365.1| hypothetical protein VIBHAR_03420 [Vibrio harveyi ATCC BAA-1116] Length = 361 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 46/337 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F K +++++ V + + ++PLLF+F Sbjct: 32 YINSIVMAFIISLLMFPIHEWFERKLPNHKNLVSLLSCVVLTFIIVIPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + + +Q+ +W+S+ GG+ HP +K L+ +L + I+ Sbjct: 85 AAIVQQGSVFSQNTY---KWVSN--GGI------QDIFQHPWVVKGLALVNEYLPFDKIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PQAIAEKIGQFATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + KI + +V +S +G + AI +G G WLAG P + G + Sbjct: 190 AMRHILPLSRSQEDKILTEIEQVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G+ A L +W + + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLTVWSVLVVGSIDNLLRPLLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 309 MNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 345 >gi|163803357|ref|ZP_02197234.1| hypothetical protein 1103602000583_AND4_14346 [Vibrio sp. AND4] gi|159172870|gb|EDP57710.1| hypothetical protein AND4_14346 [Vibrio sp. AND4] Length = 361 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 46/337 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ F K +++++ V + + ++PLLF+F +++ Sbjct: 32 YINSIVMAFIISLLMFPIHEWFERKMPSHKNLVSLLSCVVLTFIIVIPLLFVFA-AIVQQ 90 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 + S+ A W+++ GG+ HP +K L+ +L + I+ Sbjct: 91 GSVFSQNTYA---------WVTN--GGI------QDIFQHPFVVKALALVNEYLPFDKIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PQAIAEKIGQFATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + KI + +V +S +G + AI +GL G WLAG P + G + Sbjct: 190 AMRHILPLSRSQEDKILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G+ A L +W + + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLAVWSIVVVGSIDNLLRPLLMQGSSG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 309 MNTLMIFFSLLGGLHLFGLIGLIYGPLVFAVTMVLFN 345 >gi|328474213|gb|EGF45018.1| putative permease [Vibrio parahaemolyticus 10329] Length = 361 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 46/337 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +P++ F K + +++ V + + ++PLLF+F Sbjct: 32 YINSIVMAFIISLLMFPVHEWFERKMPKHKNSASLLTCVVLTFIIVIPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + + +Q+ +W+++ GG+ HP +K LS +L + I+ Sbjct: 85 AAIVQQGSVFSQNTY---KWVTN--GGI------QDIFQHPWVIKGLSIVNEYLPFDKIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 134 PKAIAEKIGQFATTFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + RI + +V +S +G + AI +GL G WLAG P + G + Sbjct: 190 AIRHIMPLSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + + + YL + G++ A L W + + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTAWSVVIVGSIDNLLRPLLMQGSAG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L FF L+GG+ GL+GL GP++ A+ V++ Sbjct: 309 MNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFN 345 >gi|160891098|ref|ZP_02072101.1| hypothetical protein BACUNI_03545 [Bacteroides uniformis ATCC 8492] gi|270294399|ref|ZP_06200601.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317481005|ref|ZP_07940085.1| hypothetical protein HMPREF1007_03204 [Bacteroides sp. 4_1_36] gi|156859319|gb|EDO52750.1| hypothetical protein BACUNI_03545 [Bacteroides uniformis ATCC 8492] gi|270275866|gb|EFA21726.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316902898|gb|EFV24772.1| hypothetical protein HMPREF1007_03204 [Bacteroides sp. 4_1_36] Length = 340 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 8/191 (4%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I +PR + ++I ++ L+F G + Q ++ L P Sbjct: 128 ISILPRIGQAIMGGISSFAVNIFVLVFVLYFMLIGGKKMEQYVNDL----LPFNDDNTQN 183 Query: 206 IVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 ++ ++ +RS +G+ ++A+ +G V YW+ G P+ + G +T ++IP G + Sbjct: 184 VIHEINMIVRSNAIGIPLLAVIQGGVAMIGYWIFGAPNILFAGFLTCFASIIPMVGTALV 243 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +++Y+ + GN A L ++G + +D +R + + L T FG+V G+ Sbjct: 244 WFPIAVYMALIGNWVQAIGLAIYGGAVISQLDNLIRFIIQKKMADIHPLITVFGVVIGLS 303 Query: 322 TMGLLGLFIGP 332 G +G+ GP Sbjct: 304 LFGFMGVIFGP 314 >gi|186471214|ref|YP_001862532.1| hypothetical protein Bphy_6456 [Burkholderia phymatum STM815] gi|184197523|gb|ACC75486.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 367 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 6/160 (3%) Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 YR I+ ++ P +I+ + IR+ G+ IA + L++G + + G Sbjct: 190 YRSAVQIASRISG------PDNGAQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFVVMG 243 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P L + ++ ++ A + V +++++ + AT +F + D L+ Sbjct: 244 IPGAGLLALAVLLIGIMQLPATLITVPVIVFVIVTEGVSTATIIFSVYVFVAGLADNVLK 303 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 P L+G + +P G +GG+ T G++GLFIGPV++A+ Sbjct: 304 PLLLGRGVAVPMPVVLIGALGGMVTGGVIGLFIGPVMLAV 343 >gi|313156951|gb|EFR56384.1| putative membrane protein [Alistipes sp. HGB5] Length = 382 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKK 202 I IP+ D+ ++I+ ++ L+F G ++++ + P + Sbjct: 147 IGMIPKLGQWVVSSIFDFGVNIVVLLFVLYFMLIGG----RRMEEYCREILPFDSSVSGS 202 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + R V ++RS +G+ ++A+ +G+V Y + G PS + GV+T +IP G + Sbjct: 203 VMREVHMIVRSNAIGIPLLAVVQGIVAYIGYLIFGAPSPLFWGVLTCFATIIPIFGTALV 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++ Y+ + G A L L+G + + VD +R + L T FG+ G+ Sbjct: 263 WLPLAGYMALAGEWGPAVGLTLYGGLVVTHVDNVVRFVMQKKLADTHPLVTIFGVFIGLS 322 Query: 322 TMGLLGLFIGPVLMAL 337 G +G+ GP+L+ + Sbjct: 323 LFGFMGVIFGPLLLEM 338 >gi|170723630|ref|YP_001751318.1| hypothetical protein PputW619_4469 [Pseudomonas putida W619] gi|169761633|gb|ACA74949.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 365 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + A + Sbjct: 207 KPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVIKGVPGAGMLAILILMLGIAQAPATL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V IY+L AT +F + D L+P L+G + +P G +GG+ Sbjct: 267 ITLPVIIYVLNVEGFTVATIVFAVYTFVAGLADNVLKPLLLGRGVDVPMPVVLIGALGGM 326 Query: 321 RTMGLLGLFIGPVLMALIAVI-WKESIMAIKEN 352 G++GLF+GPV++A+ V+ W+ + + E Sbjct: 327 VVKGIIGLFLGPVILAVTYVLFWQWVALQVPEQ 359 >gi|149196508|ref|ZP_01873562.1| hypothetical protein LNTAR_08459 [Lentisphaera araneosa HTCC2155] gi|149140188|gb|EDM28587.1| hypothetical protein LNTAR_08459 [Lentisphaera araneosa HTCC2155] Length = 363 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 84/368 (22%), Positives = 161/368 (43%), Gaps = 26/368 (7%) Query: 6 LNPQGIMRWMI-MFIILVSLYFLKGFFAP----VLSALIIGFTSWPIYSSFISKKEESST 60 LN + +M +I M +IL Y FAP +L ALII +P++ ++KK Sbjct: 8 LNKKTMMDLLIRMTLILYLSYLCLKVFAPFALLMLWALIIAIVLFPLHQK-LAKKFNGKQ 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPG-GMW 118 A V + CL I + + + M++ + + + + I P+ + + P G Sbjct: 67 GRAATVIVLLGCLIIGTPVVVLGFSMVDHVQDLYRAYESGNVQIKEPKESVKEWPIIGRK 126 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF- 177 A +LWT + + + + + + F + G + + ++I+ F Sbjct: 127 AHQLWTDASADFSAFLVDYKEPITS----FFKKMLGAAGGAMGSVAMFMGALVISGFMMA 182 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + D S++ L P +K++++ +RS G+ +A + L++G LA Sbjct: 183 FGDRGSVAM-LKIANRITGPERGEKLTKLSVMTVRSVTTGVIGVAFIQALIIGVGLILAD 241 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYL------LIKGNIFNATCLFLWGAIELFI 291 +P+ L ++ + ++ A I V IY+ + NIF T F+ G++ Sbjct: 242 IPAAAILSLVVMFLGILQLPAVIILLPVIIYMWSSTGSSLAANIF-FTIYFIVGSLS--- 297 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L+P L+G + P G +GG+ GL+GLF+G L+A+ I+ + + E Sbjct: 298 -DNILKPMLLGRGVDAPMPVVLIGALGGMMASGLIGLFLGATLLAVAYRIFMDWV-DDPE 355 Query: 352 NKEKISSN 359 +KI++ Sbjct: 356 GNQKINAE 363 >gi|325105490|ref|YP_004275144.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324974338|gb|ADY53322.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 337 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 16/234 (6%) Query: 126 HLSHPQSLKILSETFLK-TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 HL+ P K+L + K TN + F S G F D L ++ M L+F + Sbjct: 112 HLNQP---KLLDKYLDKLTNLVQ--ELFPSFLGGAF-DVFLGLVLMYFILYFMFVQSERF 165 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L + ++ + + S +G IIA+ +G ++ A+++AG+ + Sbjct: 166 ENGLIKYAP-LREYHTRQFAEELKNTTYSNVIGQGIIALIQGSLVSLAFFIAGLEDAIFW 224 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV++ ++ +P GAP+ ++ L + G+ +NA + ++ + L +D +R + Sbjct: 225 GVVSVFLSFMPVIGAPLVTLPAAVILYLNGDHYNAIFIVMFTLLILINIDNVIRFMINKH 284 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL----MALIAVIWKESIMAIKENK 353 + T G++ G+ G +G+ GP+L M LIA I+++ I A ENK Sbjct: 285 FADTHPIVTVIGVIIGIPLFGFVGIVFGPLLLLWFMHLIA-IYEDDIKA--ENK 335 >gi|218129309|ref|ZP_03458113.1| hypothetical protein BACEGG_00886 [Bacteroides eggerthii DSM 20697] gi|317475278|ref|ZP_07934544.1| hypothetical protein HMPREF1016_01524 [Bacteroides eggerthii 1_2_48FAA] gi|217988486|gb|EEC54807.1| hypothetical protein BACEGG_00886 [Bacteroides eggerthii DSM 20697] gi|316908532|gb|EFV30220.1| hypothetical protein HMPREF1016_01524 [Bacteroides eggerthii 1_2_48FAA] Length = 336 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 8/188 (4%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 +PR + +++ ++ L+F G + Q ++ + P +V Sbjct: 131 LPRIGQTLMGGISSFAVNMFVLVFVLYFMLIGGKKMEQYVNGI----LPFNETNTQNVVH 186 Query: 209 KV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 ++ +RS +G+ ++AI +G V YW+ G P+ + G +T +++P G + + Sbjct: 187 EINMIVRSNAIGIPLLAIIQGGVAMIGYWIFGAPNILFSGFLTGFASVVPMVGTALIWVP 246 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++IY+ + GN A L +GA+ + +D +R + + L T FG+V G+ G Sbjct: 247 IAIYMALIGNWLQAIGLAAFGALVISQLDNLIRFIIQKKMADIHPLITIFGVVIGLSLFG 306 Query: 325 LLGLFIGP 332 +G+ GP Sbjct: 307 FMGVIFGP 314 >gi|324497297|gb|ADY39451.1| putative inner membrane protein [bacterium enrichment culture clone P43-9H:P46-4G] Length = 261 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ + ++ G ++GVP V+ + + G + I+L Sbjct: 102 RAVALGVVVTALVQAVLGGIGLAISGVPYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYW 161 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W + + +D +RP L+ LP + G++GG+ G++GLFIG Sbjct: 162 TGDTTWGTVLLVWSCV-VGTMDNVIRPILIRMGADLPLILILSGVIGGLIAFGMIGLFIG 220 Query: 332 PVLMALIAVIWK 343 PVL+ AV W+ Sbjct: 221 PVLL---AVTWR 229 >gi|254883091|ref|ZP_05255801.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643611|ref|ZP_07998231.1| transmembrane protein [Bacteroides sp. 3_1_40A] gi|254835884|gb|EET16193.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384780|gb|EFV65739.1| transmembrane protein [Bacteroides sp. 3_1_40A] Length = 333 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T +IP G Sbjct: 182 KNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATVIPIVGTA 241 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + ++ YL + G+ +A L L+ + + +D +R L L T FG+V G Sbjct: 242 LVWFPLAAYLALSGDWTHAVGLLLYCGLIVTNIDNLIRFILQKKMADTHPLITIFGVVIG 301 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GP+L+++ Sbjct: 302 LSLFGFMGVIFGPLLLSI 319 >gi|150402118|ref|YP_001329412.1| hypothetical protein MmarC7_0191 [Methanococcus maripaludis C7] gi|150033148|gb|ABR65261.1| protein of unknown function UPF0118 [Methanococcus maripaludis C7] Length = 336 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 15/188 (7%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++F +DG+ D++ H+ Y + R + + ++ F+ + A GL+ + Sbjct: 154 YYFLKDGYRFK---DAIMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIA 210 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 +W G+P+ V LG ++ I+ ++P GG I + +S+Y + G A LF +G I L Sbjct: 211 GFWAIGIPNPVTLGALSGILTLLPIVGGWTI-YMPLSVYYVAVGMYSKAVLLFGFGVIFL 269 Query: 290 FIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + D +RP LV + + G +G+ G +GP++M I++ Sbjct: 270 SLAPDFAIRPRLVNHESSIHPALALVAFLMGPLALGVTGFALGPLIMGTFDAIFR----- 324 Query: 349 IKENKEKI 356 +K K+ I Sbjct: 325 VKNGKDSI 332 >gi|150004610|ref|YP_001299354.1| putative transmembrane protein [Bacteroides vulgatus ATCC 8482] gi|294776726|ref|ZP_06742190.1| putative membrane protein [Bacteroides vulgatus PC510] gi|149933034|gb|ABR39732.1| putative transmembrane protein [Bacteroides vulgatus ATCC 8482] gi|294449381|gb|EFG17917.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 333 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T +IP G Sbjct: 182 KNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATVIPIVGTA 241 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + ++ YL + G+ +A L L+ + + +D +R L L T FG+V G Sbjct: 242 LVWFPLAAYLALSGDWTHAVGLLLYCGLIVTNIDNLIRFILQKKMADTHPLITIFGVVIG 301 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GP+L+++ Sbjct: 302 LSLFGFMGVIFGPLLLSI 319 >gi|225621492|ref|YP_002722751.1| hypothetical protein BHWA1_02594 [Brachyspira hyodysenteriae WA1] gi|225216313|gb|ACN85047.1| predicted transmembrane protein of unknown function [Brachyspira hyodysenteriae WA1] Length = 372 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 8/173 (4%) Query: 193 EHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L P K + R++ +V I+ G I +G Y + GV + +T Sbjct: 196 RTLVPIDEKYLDRLIKQVSEGIKGIVFGNLFTGIFQGFCAFIVYTVFGVTNSFTFAFLTI 255 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I + +P G I + + I LI G I A + + I D +RP L+G I+L Sbjct: 256 IASFMPIIGTTIIWIPLGILFLINGEIIRAIIFIVCSWFFITIPDNFVRPLLLGNRIELH 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGP---VLMALIAVIWKESIMAIKENKEKISS 358 L FF ++GGV GL G+ +GP +L I I+ E + ++ KE+I+ Sbjct: 316 PLFIFFAILGGVLFFGLSGIILGPLSFILFFEIMKIYNEERL-LEAKKERIAK 367 >gi|325300722|ref|YP_004260639.1| hypothetical protein Bacsa_3645 [Bacteroides salanitronis DSM 18170] gi|324320275|gb|ADY38166.1| protein of unknown function UPF0118 [Bacteroides salanitronis DSM 18170] Length = 331 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 12/200 (6%) Query: 141 LKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + FI AS G + D +++ I+ LFF +G +++ L Sbjct: 115 LSEKNLSFIITQASSIGHSIMTGVSDLIINLAVAIMLLFFMLWEG----DKMEQFISELL 170 Query: 197 PAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P ++ K+ +RS +G+ ++AI +G + Y L P+ V ++T ++ Sbjct: 171 PFEENNKREVLQKIQLIVRSNAIGIPLLAIIQGFISLFGYLLCHAPNPVLTAMLTGFASI 230 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + V+ Y I G+ + L +G I + D +R L + L T Sbjct: 231 VPLVGTALVWVPVTAYFFIIGDWVHGLILLAYGGIIISQCDNLIRFILQKKMANIHPLIT 290 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 291 IFGVVAGLPIFGFMGIIFGP 310 >gi|317491965|ref|ZP_07950399.1| hypothetical protein HMPREF0864_01163 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920086|gb|EFV41411.1| hypothetical protein HMPREF0864_01163 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 366 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 99 ANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 A +P WL IP G W L+ S+ I I + A+ G Sbjct: 103 AKNWSVPDLLWLKSIPAVGHKLYNSWHSMLAGGGSIIIAKIQPYIGQTITWFVAQAAHVG 162 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 L L ++F + Y G ++ + L + + IR+ LG Sbjct: 163 SFVLHCSLMLLFSAL----LYSRGEDVALGIRHFAIRLGSDRGDAAVVLAAQAIRAVALG 218 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 + + A+ + ++ G ++G+ L V+ I + G + I+L G+ Sbjct: 219 VVVTALVQSVLGGIGLAISGIGYATLLTVLMFICCLAQLGPLLVLVPAIIWLYWTGDTTW 278 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 T L +W + + +D LRP L+ LP + G++GG+ G++GLFIGPV++A+ Sbjct: 279 GTVLLVWSCV-VGTLDNFLRPALIRMGADLPMILILSGVIGGLLAFGMIGLFIGPVVLAV 337 >gi|283833356|ref|ZP_06353097.1| putative membrane protein [Citrobacter youngae ATCC 29220] gi|291070999|gb|EFE09108.1| putative membrane protein [Citrobacter youngae ATCC 29220] Length = 366 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 3/127 (2%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 R+ LG+ + A+ + ++ G + GVP L V+ + ++ G P+ A+ I+L Sbjct: 212 RAVALGVVVTALVQAVLGGIGLAVTGVPYATLLAVLMILSCLVQLGPLPVLVPAI-IWLY 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G+ T L +W + + +D +RP L+ LP + G++GG+ G++GLFI Sbjct: 271 WTGDSTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFI 329 Query: 331 GPVLMAL 337 GPV++A+ Sbjct: 330 GPVVLAV 336 >gi|218247850|ref|YP_002373221.1| hypothetical protein PCC8801_3084 [Cyanothece sp. PCC 8801] gi|257060829|ref|YP_003138717.1| hypothetical protein Cyan8802_3036 [Cyanothece sp. PCC 8802] gi|218168328|gb|ACK67065.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] gi|256590995|gb|ACV01882.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 363 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 10/209 (4%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G++ L + +SII I + + ++++ + L P + + I Sbjct: 156 LAANMGLLLLKFIVSIIIAGILMI----NAQGLNRRASQVILRLTPQQGQGFLELATATI 211 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 RS G+ +AI + L++ +A +P L +++ ++ +I G I IY Sbjct: 212 RSVTRGIIGVAILQTLLIALGLMVAKIPFAGLLALLSLVLCIIQIGPGIVVLGCIIYAWS 271 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 A LW + +VD L+P L+ + +P L G++GG G+LGLFIG Sbjct: 272 TMGTLGALLFTLW-MVPTTLVDNVLKPILMAQGLPVPTLIILIGVLGGTLVHGILGLFIG 330 Query: 332 PVLMAL-----IAVIWKESIMAIKENKEK 355 PV+++L +A + +ES++ ++E+ Sbjct: 331 PVILSLGYQLIVAWVNQESVVISTISEEE 359 >gi|212693909|ref|ZP_03302037.1| hypothetical protein BACDOR_03431 [Bacteroides dorei DSM 17855] gi|237708530|ref|ZP_04539011.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724003|ref|ZP_04554484.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265751306|ref|ZP_06087369.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663441|gb|EEB24015.1| hypothetical protein BACDOR_03431 [Bacteroides dorei DSM 17855] gi|229437667|gb|EEO47744.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457459|gb|EEO63180.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263238202|gb|EEZ23652.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 333 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T +IP G Sbjct: 182 KNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATVIPIVGTA 241 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + ++ YL + G+ +A L L+ + + +D +R L L T FG+V G Sbjct: 242 LVWFPLAAYLALSGDWTHAIGLLLYCGLIVTNIDNLIRFILQKKMADTHPLITIFGVVIG 301 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GP+L+++ Sbjct: 302 LSLFGFMGVIFGPLLLSI 319 >gi|116748040|ref|YP_844727.1| hypothetical protein Sfum_0593 [Syntrophobacter fumaroxidans MPOB] gi|116697104|gb|ABK16292.1| protein of unknown function UPF0118 [Syntrophobacter fumaroxidans MPOB] Length = 376 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 80/345 (23%), Positives = 145/345 (42%), Gaps = 46/345 (13%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + ++ L F ++ ALI+ T +P++ + A + + + L Sbjct: 28 LILVLAMLCYQVLSPFLTLMVWALILAVTIFPLHQFLAGRIGGRQGLAAALLVIVGLMLI 87 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-------GMWASELWTKHL 127 +VP L + +LV+ V N IP PR PG G ++W++ Sbjct: 88 VVPTAMLMSSLGDSVHQLVND-VQNNSLKIPAPR-----PGVEGWPVVGKKVHDIWSRAY 141 Query: 128 SH----PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY---RD 180 + QS++ KT + F+ A L + S I I + F R Sbjct: 142 ADLPALVQSMQPKIGELAKT-ALGFVAGIAGG----LLQFIASFIVAGIIMAFGQSGGRG 196 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I +++ +G + +R+ IR+ G+ +A + +++G A ++GVP Sbjct: 197 SLAIFERI--VGRE----RGGEFARLSTSTIRAVSQGVIGVAFIQAIIVGLALLVSGVPW 250 Query: 241 HVALGVITAIM--AMIPGGAPISFTAVSIYLLIKGNIFNATC------LFLWGAIELFIV 292 AL +I ++ A IP A I +Y+ + G+ NA L L G + Sbjct: 251 AGALALIVLVLGIAQIP--ALIVTLPAIVYIWMSGHYGNAAAVAYTVVLILSG-----MT 303 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 D L+P ++G + P G +GG+ T G+LG+F+G L+ L Sbjct: 304 DNVLKPLMLGRGVDAPMPVILLGALGGMGTAGILGMFVGATLLTL 348 >gi|237731304|ref|ZP_04561785.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906843|gb|EEH92761.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 369 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 3/127 (2%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 R+ LG+ + A+ + ++ G + GVP L V+ + ++ G P+ A+ I+L Sbjct: 212 RAVALGVVVTALVQAVLGGIGLAVTGVPYATLLAVLMILSCLVQLGPLPVLIPAI-IWLY 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G+ T L +W + + +D +RP L+ LP + G++GG+ G++GLFI Sbjct: 271 WTGDSTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFI 329 Query: 331 GPVLMAL 337 GPV++A+ Sbjct: 330 GPVVLAV 336 >gi|134045617|ref|YP_001097103.1| hypothetical protein MmarC5_0574 [Methanococcus maripaludis C5] gi|132663242|gb|ABO34888.1| protein of unknown function UPF0118 [Methanococcus maripaludis C5] Length = 321 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI----VPKVIRSTFLGMTI 220 + ++F+ F+F +DG I DS ++ P K+ + + + K +++ F+G + Sbjct: 131 MRLLFLSFMTFYFLKDGDKIK---DSFLLYI-PKEKKRNTLLFVNEIHKALKTLFIGNVV 186 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNA 278 ++ G + YWL G+P+ + LG ++ I+ ++P GG I + +++Y L+ G Sbjct: 187 TSLIVGFISIIGYWLIGLPNPITLGALSGILNILPVVGGWTI-YVPLTVYYLLTGEFTKG 245 Query: 279 TCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +G + L + D +RP ++ L + G G+ GL IGP+++AL Sbjct: 246 ILLGFFGIVFLSLAPDFAIRPRVISKDGDLHPALVLIAFLIGPLVFGIPGLAIGPIIVAL 305 Query: 338 IAVIWKESIMAIKENKEK 355 + I K + I E+ E Sbjct: 306 VYAIHK--VRKIVESGEN 321 >gi|300710665|ref|YP_003736479.1| hypothetical protein HacjB3_06480 [Halalkalicoccus jeotgali B3] gi|299124348|gb|ADJ14687.1| hypothetical protein HacjB3_06480 [Halalkalicoccus jeotgali B3] Length = 325 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 26/308 (8%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVI-ATVSVMCLFIVPLLFLFYYGMLEMKEL 92 VL A++I + P+Y + E+ LA++ A V+ L LL + L++ + Sbjct: 23 VLLAVLIAYLLTPVYRRLVPVTGETGGALALMGAATGVVILPFAALLSVVASDALDLAQR 82 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +S SDI E ++ ++ T L T G +F Sbjct: 83 LSD---------------SDID-----LEEVESVIAASTGREVDLSTTLGTAGENFAGVL 122 Query: 153 ---ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 AS +F + I LFFF RDG ++ L + L +++ V Sbjct: 123 VGNASDLVGVFTHALIGITLSAFLLFFFLRDGRYFTEWLFEV-TPLPDVVLGELATNVDD 181 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 ++ + +G +++ +GL+ G + G+P+ V V ++A++P GA + + ++Y Sbjct: 182 LMWAVLVGHVLVSAIQGLLAGIGLAVTGIPNAVFWTVAMMLLALLPVVGAFLVWGPAAVY 241 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G+ LFL+G + + D LR LV +L G+VGG+ +G++GL Sbjct: 242 LVALGDPVAGGGLFLYGMTVVGLSDNYLRSILVDRRAQLNPATIMLGVVGGLYLLGVMGL 301 Query: 329 FIGPVLMA 336 F GPV++ Sbjct: 302 FFGPVIVG 309 >gi|240103191|ref|YP_002959500.1| hypothetical protein TGAM_1134 [Thermococcus gammatolerans EJ3] gi|239910745|gb|ACS33636.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 335 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 8/215 (3%) Query: 138 ETFLKTNGIDFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +TF +P+ + S F Y L +I + A ++ G + + + SL Sbjct: 109 QTFFGQVQSQIVPKLTDYVSSFTFSVPKYLLQLIVFLFAFYYALVYGEKLREFILSLVPE 168 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---SHVALGVITAIM 251 + +I K + + ++ + +G ++ Y + GV + + G +T + Sbjct: 169 NQAPFIVEILNRTDKTLDALVRAWLLLNVAKGFLMTIGYIIFGVGDVYTAIIAGFLTFLF 228 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPF 309 + +P + + A +IYL +KG++ A + ++GA+ + + D T+RP LV +L Sbjct: 229 SFVPLLEGWMLWVAGAIYLYMKGSLLGAIGIAVYGAVLVSPLPDYTVRPMLVAKDAELDE 288 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F G++GG GL GL +GPV++++ V+ KE Sbjct: 289 TLVFIGMLGGTWAFGLKGLLLGPVILSIALVLLKE 323 >gi|118589355|ref|ZP_01546761.1| hypothetical protein SIAM614_07418 [Stappia aggregata IAM 12614] gi|118438055|gb|EAV44690.1| hypothetical protein SIAM614_07418 [Stappia aggregata IAM 12614] Length = 372 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 72/341 (21%), Positives = 147/341 (43%), Gaps = 17/341 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SL + FF ++ A+++ +P++ ++ AV+ T+ + + I P+ L Sbjct: 42 SLQLVAPFFLFLVWAVVLTVALYPVFGWLTARLGGRKVLAAVLITLCCLAIVIGPVAVLV 101 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 + ++ V P+P L+ +P G SE+W L+ + L + F Sbjct: 102 VSLVDTLQGWYHGVAGGVLKLPPLPEKLAALPVVGAKLSEIW--QLAG----QGLEQVFA 155 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF---FYRDGFSISQQLDSLGEHLFPA 198 K G +P SR + S++F I+++ + ++++ + + Sbjct: 156 KV-GPTLVPA-GSRILGVLASLSGSVLFFIVSIILAGCLFVPAPALAKGAKLFADRIIAP 213 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + IR+ G+ +A+ +GL+ G VP L + I+ ++ G Sbjct: 214 RGSEFVDLAGATIRNVSRGVIGVAVVQGLLTGIVLIAFSVPLAGVLTFVALILCIVQIGP 273 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + I+ ++ A LF + + ++D LRP L+ + +P L G++G Sbjct: 274 ALVIVPTIIWAWSSWDLVPA-LLFTVLMVPVMLIDNVLRPILMSRGLNVPMLVILIGVLG 332 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G GL+GLF+GPV++A ++ E ++A + EK S+ Sbjct: 333 GTIAYGLIGLFLGPVILA----VFYELVIAWVKAGEKRSAE 369 >gi|313497077|gb|ADR58443.1| Permease [Pseudomonas putida BIRD-1] Length = 365 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 7/156 (4%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + A + Sbjct: 207 KPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVVKGVPGAGMLAIVILMLGIAQAPATL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLPFLPTFFGLV 317 V IY+ AT +F AI F+ D L+P L+G + +P G + Sbjct: 267 VTLPVIIYVFNAEGFTVATIIF---AIYTFVAGLADNVLKPLLLGRGVDVPMPVVLIGAL 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI-WKESIMAIKEN 352 GG+ G++GLFIGPV++ + V+ W+ + + E Sbjct: 324 GGMVVKGIIGLFIGPVILGVTYVLFWQWVALQVPEQ 359 >gi|260664188|ref|ZP_05865041.1| permease [Lactobacillus jensenii SJ-7A-US] gi|260562074|gb|EEX28043.1| permease [Lactobacillus jensenii SJ-7A-US] Length = 395 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 11/190 (5%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +++IFM + LF+ +DG ++ L + + ++ + + I + G Sbjct: 175 VITMIFMTLLTAPFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQ 234 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK--GNI 275 +A+ G++ Y + G+P AL V+ A M +IP G I+ V I I G + Sbjct: 235 ITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGML 294 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 N +F AIE I + + P +VG +K+ + T L+G GL G+ G + Sbjct: 295 INVLIVF---AIEQTIETRFISPIIVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIY 351 Query: 336 ALIAVIWKES 345 A++ ++ S Sbjct: 352 AVVKIVVSRS 361 >gi|297206302|ref|ZP_06923697.1| permease [Lactobacillus jensenii JV-V16] gi|297149428|gb|EFH29726.1| permease [Lactobacillus jensenii JV-V16] Length = 401 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 11/190 (5%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +++IFM + LF+ +DG ++ L + + ++ + + I + G Sbjct: 181 VITMIFMTLLTAPFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQ 240 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK--GNI 275 +A+ G++ Y + G+P AL V+ A M +IP G I+ V I I G + Sbjct: 241 ITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGML 300 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 N +F AIE I + + P +VG +K+ + T L+G GL G+ G + Sbjct: 301 INVLIVF---AIEQTIETRFISPIVVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIY 357 Query: 336 ALIAVIWKES 345 A++ +I S Sbjct: 358 AVVKIIVSRS 367 >gi|290770140|gb|ADD61900.1| putative protein [uncultured organism] Length = 310 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 8/191 (4%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I +PR + ++I ++ L+F G + Q ++ L P Sbjct: 98 ISILPRIGQAIMGGISSFAVNIFVLVFVLYFMLIGGKKMEQYVNDL----LPFNDDNTQN 153 Query: 206 IVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 ++ ++ +RS +G+ ++A+ +G V YW+ G P+ + G +T ++IP G + Sbjct: 154 VIHEINMIVRSNAIGIPLLAVIQGGVAMIGYWIFGAPNILFAGFLTCFASIIPMVGTALV 213 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +++Y+ + GN A L ++G + +D +R + + L T FG+V G+ Sbjct: 214 WFPIAVYMALIGNWVQAIGLAIYGGAVISQLDNLIRFIIQKKMADIHPLITVFGVVIGLS 273 Query: 322 TMGLLGLFIGP 332 G +G+ GP Sbjct: 274 LFGFMGVIFGP 284 >gi|255008391|ref|ZP_05280517.1| putative transmembrane protein [Bacteroides fragilis 3_1_12] gi|313146114|ref|ZP_07808307.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134881|gb|EFR52241.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 323 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 2/177 (1%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +++ ++ L+F G + +D + ++++ + ++RS +G+ ++ Sbjct: 131 SFAINLFVLVFVLYFMLIGGTKMESYIDDI-LPFNEKNTREVTHNINMIVRSNAIGIPLL 189 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC 280 A+ +G V Y++ G P+ +GV+T +IP G + + V+ YL + G NA Sbjct: 190 AVIQGGVALIGYFIFGAPNAWLVGVLTCFATIIPMVGTALVWFPVAAYLALTGEWANAIG 249 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L +G I + D +R L L T FG+V G+ G +G+ GP++++L Sbjct: 250 LAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLPLFGFMGVIFGPLILSL 306 >gi|299538203|ref|ZP_07051488.1| hypothetical protein BFZC1_19390 [Lysinibacillus fusiformis ZC1] gi|298726405|gb|EFI66995.1| hypothetical protein BFZC1_19390 [Lysinibacillus fusiformis ZC1] Length = 352 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 43/271 (15%) Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF------ 140 L + +++++++L ++ P ++S + S++W L +++ +E F Sbjct: 79 LSITQIMTQIILLSKQA---PYYISKL------SDMW---LHMQENISKYTEDFPPEVSA 126 Query: 141 -LKTNGIDFIPRFASRFGMIFLDYC-------------LSIIFMIIALFFFYRDGFSISQ 186 L+ +DFI + F + F +Y +S++ +IALF F D + Q Sbjct: 127 SLQKTTMDFIKKVEESF-LSFFNYSKVSAFFSEIPSLFISLLVYMIALFLFMLDLPKLKQ 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH-V 242 ++L P KKI I+ ++ +TF G + ++G + + P + V Sbjct: 186 ---ITYKYLKPNTAKKIKIILNRLKDATF-GYMKAHLFVSFIIGGVTLIGLLLIQPKYAV 241 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +I ++ ++P G+ I +Y L+ GN A LF+ AI L I+ + + P L+ Sbjct: 242 TMTIIIWLIDIVPFLGSIIILAPWGLYHLLMGNTSIAVKLFILAAI-LLIIRRVVEPKLM 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G I L LPT + G++ G++GL +GP Sbjct: 301 GDHIGLSTLPTLISMFIGLQLFGIIGLLVGP 331 >gi|238854901|ref|ZP_04645231.1| transport protein [Lactobacillus jensenii 269-3] gi|282931613|ref|ZP_06337106.1| permease [Lactobacillus jensenii 208-1] gi|238832691|gb|EEQ24998.1| transport protein [Lactobacillus jensenii 269-3] gi|281304224|gb|EFA96333.1| permease [Lactobacillus jensenii 208-1] Length = 401 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 11/190 (5%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +++IFM + LF+ +DG ++ L + + ++ + + I + G Sbjct: 181 VITMIFMTLLTAPFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQ 240 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK--GNI 275 +A+ G++ Y + G+P AL V+ A M +IP G I+ V I I G + Sbjct: 241 ITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGML 300 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 N +F AIE I + + P +VG +K+ + T L+G GL G+ G + Sbjct: 301 INVLIVF---AIEQTIETRFISPIIVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIY 357 Query: 336 ALIAVIWKES 345 A++ ++ S Sbjct: 358 AVVKIVVSRS 367 >gi|325959136|ref|YP_004290602.1| hypothetical protein Metbo_1390 [Methanobacterium sp. AL-21] gi|325330568|gb|ADZ09630.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 349 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 11/197 (5%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY--WKKISRIVPKVIRSTFLGMTIIAI 223 +I ++ ++F+F ++G + E L P + +I V +++S + + A+ Sbjct: 159 DVIVLLFSVFYFAKEG----DKFVGFIEDLLPKTPTFSEIYSEVDAILKSIMITNILCAV 214 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLF 282 GL+ Y++ G P + LG++TA +P P I + A+ + ++ GN + Sbjct: 215 ILGLLSVVLYYILGYPYILLLGILTAFSEFVPVVGPWIVYGALGVVDILTGNPVRGVIVI 274 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + +VD +RP L G + L G + G T+GL GLFIGP+++ + V++ Sbjct: 275 VVGWLIDTVVDMYIRPKLAGEFTNVHPLIFLVGFLFGALTLGLPGLFIGPLIVGVTYVLF 334 Query: 343 KESIMAIKENKEKISSN 359 ++ +E + KI+ Sbjct: 335 EKY----REERLKINQQ 347 >gi|256851487|ref|ZP_05556876.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260660908|ref|ZP_05861823.1| permease [Lactobacillus jensenii 115-3-CHN] gi|256616549|gb|EEU21737.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260548630|gb|EEX24605.1| permease [Lactobacillus jensenii 115-3-CHN] Length = 395 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 11/190 (5%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +++IFM + LF+ +DG ++ L + + ++ + + I + G Sbjct: 175 VITMIFMTLLTAPFVLFYMLKDGHQLNGCLTKFAPRRWQDSFSRLLHDINEAISAYIRGQ 234 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK--GNI 275 +A+ G++ Y + G+P AL V+ A M +IP G I+ V I I G + Sbjct: 235 ITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGML 294 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 N +F AIE I + + P +VG +K+ + T L+G GL G+ G + Sbjct: 295 INVLIVF---AIEQTIETRFISPIVVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIY 351 Query: 336 ALIAVIWKES 345 A++ +I S Sbjct: 352 AVVKIIVSRS 361 >gi|282933487|ref|ZP_06338863.1| permease [Lactobacillus jensenii 208-1] gi|281302418|gb|EFA94644.1| permease [Lactobacillus jensenii 208-1] Length = 401 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 11/190 (5%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +++IFM + LF+ +DG ++ L + + ++ + + I + G Sbjct: 181 VITMIFMTLLTAPFVLFYMLKDGHQLNGCLTKFAPRRWQDSFSRLLHDINEAISAYIRGQ 240 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK--GNI 275 +A+ G++ Y + G+P AL V+ A M +IP G I+ V I I G + Sbjct: 241 ITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGML 300 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 N +F AIE I + + P +VG +K+ + T L+G GL G+ G + Sbjct: 301 INVLIVF---AIEQTIETRFISPIVVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIY 357 Query: 336 ALIAVIWKES 345 A++ +I S Sbjct: 358 AVVKIIVSRS 367 >gi|126436920|ref|YP_001072611.1| hypothetical protein Mjls_4349 [Mycobacterium sp. JLS] gi|126236720|gb|ABO00121.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 400 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 68/330 (20%), Positives = 144/330 (43%), Gaps = 33/330 (10%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YFL+GFF ++ A + + P+Y ++ + A + ++ M I+P + + Sbjct: 34 YFLRGFFILIVVAAVGAYLFAPLYERL--RRRFGTGLSATLTLLAAMLTVIIPATLVVFL 91 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWL--SDIP-----GGMWASELWTK------HLSHPQ 131 ++++ ++V+ V NQ W+ +D+ +A++L K L+ P Sbjct: 92 AIVQITQMVTTV---NQ-------WMATTDVSTLGDRAMTFANDLIEKVPFLDFRLT-PD 140 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL-FFFYRDGF-SISQQLD 189 +L+ T + G + G + ++IF+ + + RD ++ ++L+ Sbjct: 141 TLRDGVVTVSQRVGEWLLGVLQGAVGGVLGALAATVIFLYVFISLLVNRDKIRTLIRRLN 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVIT 248 LGE + Y K +V ++ F +IA+ +G+ + ++AG ++ Sbjct: 201 PLGEDITDLYLAKTGAMVKGTVKGQF----VIALCQGVAGAISIYVAGFHDGFFFFAIVL 256 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +++IP G+ I I + + GN+ + + + + +D LRP LV +L Sbjct: 257 SALSVIPLGSGILSIPFGIGMALFGNVIGGVFVVAFHLLVVTNIDNVLRPMLVPKAARLD 316 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + G+ G G+ +GPVLM +I Sbjct: 317 PALMLLAVFSGIAMFGFWGIVLGPVLMIII 346 >gi|257093350|ref|YP_003166991.1| hypothetical protein CAP2UW1_1757 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045874|gb|ACV35062.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 377 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 83/375 (22%), Positives = 157/375 (41%), Gaps = 65/375 (17%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY---SSFISKKEESSTFLAVIATVSVM 71 +++ ++L+ +F F +L ALI+ T +P++ + I K+ ++ L V+ ++V+ Sbjct: 28 LVLALVLLCYHFFSPFLTMMLWALILAVTIYPLHEMLAGRIGGKQGLASTLIVLVAIAVI 87 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASELWTK-HLS 128 + P + L + ELV K V N +P P ++ P G +W++ H Sbjct: 88 ---VTPTIMLASQFGDSVHELV-KGVRDNTLEVPAPSEKVAAWPVVGKKVHAIWSQAHDD 143 Query: 129 HPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P +K + L T + + M L + ++ I M G S +Q Sbjct: 144 LPALVKSMQPKIGELATKALGIVAGLGGGLLMFVLAFIVAGIMMAY--------GESGAQ 195 Query: 187 QLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ E +F A K+ + + +R+ G+ IA + L++G + +A VP L Sbjct: 196 AMQAIFERVFGLARGKEFTNLSSATVRAVASGVIGIACIQALLIGVSLMIASVPFAGLLA 255 Query: 246 VITAIM--AMIPG----------------GAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 VI ++ A +P A + A S+ L++ G Sbjct: 256 VIVLVLGVAQLPALLVTLPVIGWIWASGDYATVPAAAYSVLLVVGG-------------- 301 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKE 344 + D L+P ++G + P G +GG+ T G+LG+FIG +AL I + W Sbjct: 302 ---MADNVLKPIMLGRGVDAPMPVILIGALGGMATSGILGMFIGATALALGYQIFMRW-- 356 Query: 345 SIMAIKENKEKISSN 359 + +N E++ Sbjct: 357 ----VDDNPERVRQQ 367 >gi|148545994|ref|YP_001266096.1| hypothetical protein Pput_0748 [Pseudomonas putida F1] gi|148510052|gb|ABQ76912.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 365 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + A + Sbjct: 207 KPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFIVKGVPGAGMLAIVILMLGIAQAPATL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V IY+ AT +F + D L+P L+G + +P G +GG+ Sbjct: 267 VTLPVIIYVFNAEGFTVATIIFAVYTFVAGLADNVLKPLLLGRGVDVPMPVVLIGALGGM 326 Query: 321 RTMGLLGLFIGPVLMALIAVI-WKESIMAIKEN 352 G++GLFIGPV++ + V+ W+ + + E Sbjct: 327 VVKGIIGLFIGPVILGVAYVLFWQWVALQVPEQ 359 >gi|145222657|ref|YP_001133335.1| hypothetical protein Mflv_2069 [Mycobacterium gilvum PYR-GCK] gi|145215143|gb|ABP44547.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] Length = 391 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 75/351 (21%), Positives = 145/351 (41%), Gaps = 50/351 (14%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMCLFIVPLLF 80 YFL+ + + + ++ + +P+Y ++ ++T A IA V + PL Sbjct: 26 YFLRTYVLLIAVSAVLAYLFFPLYRRLRTRMGTGGAAATTLFAAIAIVGL------PLSG 79 Query: 81 LFYYGMLEMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + L++ ++VS + + + + L D + A + P+S++ Sbjct: 80 VVFLAFLQISQMVSGIGHWVEQTDLTALGQRLLDSGNELLARVPFVNFTLTPESVR---- 135 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLS------------IIFMII--ALFFFYRDGFSI 184 D I R G I L + IIF+ + AL + Sbjct: 136 --------DAIGRLGQNAGEIALGFARDSVGGIVSTVTGVIIFLYVFLALLTNGDKVLDL 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L+ LG+ + Y KI +V ++ F IIA +G+ + ++AG+ + + Sbjct: 188 FRDLNPLGDKVSDIYLAKIGAMVSATVKGQF----IIAACQGVAGAISVYIAGIHNGFFM 243 Query: 245 GVI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI +++ IP G+ I + I + I GN + ++ I +D LRPFLV Sbjct: 244 FVIFLTVLSFIPLGSGIVVIPLGIGMAIFGNPVGGIFVVVFHIIATTNIDNLLRPFLVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA-------VIWKESIM 347 L + G++ G +G+ +GPVLM +I V+++++ M Sbjct: 304 SAHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYRVVYRDAPM 354 >gi|94264995|ref|ZP_01288765.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|94267189|ref|ZP_01290805.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93452098|gb|EAT02778.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93454542|gb|EAT04823.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 381 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 9/211 (4%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P+ L +T G+ ++ AS + + + S M I +FF + +L Sbjct: 131 EPEQLGRTLADLARTAGL-YLYNQASGWAANVVMFVFSFFLMFITIFFLLIE----QDRL 185 Query: 189 DSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L P ++ R+ K + + +G I A+ +G+V G + L G+ V G Sbjct: 186 LNYILRLSPLPDQQERRLFAKFDEITSAVLIGNGICAVIQGVVGGIIFALLGLGPPVLWG 245 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I A++A +P G + ++Y+ KG++ L + + ++ L+P LVG Sbjct: 246 AIMAVLAFLPIFGIGLVMVPAALYMFFKGSLAGGIALLVLYGVLAVSIEYALKPKLVGQR 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 +++ L F ++GG+ + G LG+ GP+++ Sbjct: 306 VRMHTLLVFLSIIGGLSSFGFLGIIYGPLII 336 >gi|15669367|ref|NP_248172.1| hypothetical protein MJ_1177 [Methanocaldococcus jannaschii DSM 2661] gi|8928508|sp|Q58578|Y1177_METJA RecName: Full=UPF0118 membrane protein MJ1177 gi|1591804|gb|AAB99180.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 334 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 63/302 (20%), Positives = 144/302 (47%), Gaps = 29/302 (9%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + + P+Y+ I +K+ + T A +A + ++I+P++ + Y +L E++ N Sbjct: 39 AYMALPVYN--ILRKKFNKTISAGLA----ISIYILPIMTITIYALLTFMEIILSF---N 89 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 I ++++I ++ S + + +++ Q + + F+K + +F+ + +I Sbjct: 90 TKSIE--PYINEILS-IYNSFMLERIINNEQIIAKYIDEFIKY----LVSQFSGK--IID 140 Query: 161 LDYCLSIIFMIIAL-FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + Y + + M++ L F+F RDG + +L P +K+ RI + ++ + Sbjct: 141 VGYLIVKVIMVLFLTFYFLRDG----DKAKNLIISFVPDEYKEKMRIYLSYLHDSYKNLF 196 Query: 220 IIAIGEGLVLGS----AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 I + +++ Y + GVP +IT I A++P G + + +++IY + + Sbjct: 197 ISCVSLSIIITILSYIGYLILGVPYAELFAIITGIFALLPILGGWMVYISIAIYFFLIHD 256 Query: 275 IFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A +F++G + L I D +RP+LV + + + + ++GL G IGP+ Sbjct: 257 YTKAVFMFIYGELFLSIAPDFVIRPYLVKKEVDIHPVLVVIAFLMAPLSLGLSGFAIGPL 316 Query: 334 LM 335 ++ Sbjct: 317 VV 318 >gi|150400408|ref|YP_001324175.1| hypothetical protein Mevan_1671 [Methanococcus vannielii SB] gi|150013111|gb|ABR55563.1| protein of unknown function UPF0118 [Methanococcus vannielii SB] Length = 334 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 12/180 (6%) Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG+ I S + + R V + F+G + ++ G++ Y L GVP Sbjct: 159 DGYKIKDIFLSYVPEDRKEHATLVIREVHAAFKILFIGNAVTSLCVGIISIIGYSLMGVP 218 Query: 240 SHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTL 296 + + LG ++ I+ ++P GG I F ++IY L+ G+I + + L+G I L + D + Sbjct: 219 NSITLGALSGILNILPVVGGWTIYF-PLTIYYLLIGDITKSILILLFGIIFLSLAPDFAI 277 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 RP +V L + + G G+ GL IGP+++ ++ A+ + ++KI Sbjct: 278 RPKIVAKSSDLHPVLVLIAFLVGPLAFGISGLAIGPIIVG--------TVYAVHKARQKI 329 >gi|254503591|ref|ZP_05115742.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222439662|gb|EEE46341.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 367 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 33/329 (10%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLA------VIATVSVMC 72 SL + FFA +L A+++ +P Y+ K K S+T L VI V+V+ Sbjct: 42 SLQLVAPFFAFLLWAVVLTVALYPAYAWLTGKLGGRKVLSATILTLIGLGIVIGPVAVLV 101 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQ 131 + +V L FY G+ V P+P L+++P G +E W L+ Q Sbjct: 102 VSLVETLQRFYEGVTSGAISVP----------PLPPKLAELPMVGEKIAEFW--QLAS-Q 148 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF---FYRDGFSISQQL 188 SL E FL G P ++ + S++F I+++ + G +++ Sbjct: 149 SL----EQFLTKIGPMVAPA-GTKILSVLASLSGSVLFFIVSIILSGCLFVPGPALASGA 203 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + IR+ G+ +A+ +GL+ G VP L Sbjct: 204 KRFADRIIAPRGGEFVDLAGATIRNVSRGVIGVAVIQGLLTGVILIAFAVPLAGLLTFAA 263 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +I G + I+ + A LF + + +VD LRP L+ + +P Sbjct: 264 LILCIIQIGPALVILPTIIWTWSSWELLPA-LLFTVLIVPVMLVDNVLRPILMSRGLDVP 322 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L G++GG GL+GLF+GPV++++ Sbjct: 323 MLVILIGVLGGTLAYGLIGLFLGPVILSV 351 >gi|209515626|ref|ZP_03264490.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503862|gb|EEA03854.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 370 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 82/163 (50%), Gaps = 12/163 (7%) Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 YR I+ ++ P +I+ + IR+ G+ IA + L++G + + G Sbjct: 190 YRSAVQIASRISG------PEEGTQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFIVMG 243 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DK 294 +P L + ++ ++ A + V I++++ + AT +F ++ +F+ D Sbjct: 244 IPGAGLLALAVLLLGIMQLPATLITIPVIIFVILTDGVSTATIIF---SVYIFVAGLADN 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+P L+G + +P G +GG+ T G++GLF+GPV++A+ Sbjct: 301 VLKPLLLGRGVAVPMPVVLVGALGGMVTGGVIGLFVGPVVLAV 343 >gi|218888166|ref|YP_002437487.1| hypothetical protein DvMF_3082 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759120|gb|ACL10019.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 397 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 2/134 (1%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 +V R+ +G ++A+ +G++ G + G+P + G + +++P G + + SI Sbjct: 219 RVARAVLVGGLLVAVVQGVLGGLGMAIVGMPG-LFWGTVMGFASLVPVVGTGLVWGPASI 277 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YLL+ G A L LW ++ + D LRP+ + G F ++GG++T G+ G Sbjct: 278 YLLLMGQWKGAVFLVLWCSLVVAGADSFLRPYFMRGSSGASVFYIFLSILGGLKTFGMAG 337 Query: 328 LFIGPVLMALIAVI 341 + GP++++ V+ Sbjct: 338 IIYGPLILSFTMVM 351 >gi|57242122|ref|ZP_00370062.1| acid membrane antigen A Cj1363 [Campylobacter upsaliensis RM3195] gi|57017314|gb|EAL54095.1| acid membrane antigen A Cj1363 [Campylobacter upsaliensis RM3195] Length = 347 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/340 (20%), Positives = 139/340 (40%), Gaps = 34/340 (10%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K F + A ++ + +++ F+S ++ + + T ++ LF P F Y + Sbjct: 24 KSFLLVMAIAALMAVATSNLHAKFLSLTKQRKLLASTLTTSFMILLFFAP----FIYTSI 79 Query: 88 EMKELVSK--VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+ + + + L Q + + +P + E K L L Sbjct: 80 ELAKALKNFDINLITQTLDYIKHYEFSLPSSLEFLEPKIKEFIAGLDLNSLYR-----QA 134 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + F +D L I +F+F+ + + +L + + P ++ Sbjct: 135 LTYASSFTKSGAKFLMDMAL------ICVFYFFANLY--GTELVIYLKSIVPINKTELDE 186 Query: 206 I---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 I V V+ M I+AI +G + G + G + +GVI A+ ++IP G + Sbjct: 187 ILGEVGNVMAVVLYSMIIVAIFQGALFGIIMFFYGYDG-LLMGVIFAVSSLIPAVGGALV 245 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPT 312 + VS+Y GN+ +A +F++ I + FI D ++P LV P + L Sbjct: 246 YVPVSLYTFASGNLGSAIVIFIYSFIMISFIADTLIKPLIIKWINEKLVKTPTNINELLI 305 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMA-LIAVIWKESIMAIKE 351 F ++ G+ + G G+ +GP ++ I+ I SI+ K Sbjct: 306 FLAMIAGISSFGFWGIILGPAILTFFISTIRFYSILKDKN 345 >gi|298374135|ref|ZP_06984093.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|298268503|gb|EFI10158.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] Length = 337 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMT 219 + ++++ +I L+F G + L +L FP + ++ ++ ++S +G+ Sbjct: 148 FAVNVVVLIFILYFMLIGGRKMENYLYTL----FPFSDQNKDEVLNEINMIVKSNAIGIP 203 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 ++A+ +G+V Y++ P + G +T I +IP G + + ++ Y+ + G+ +A Sbjct: 204 LLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATIIPIVGTALVWVPLAAYMALNGDWVHA 263 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L ++ + + VD +R L + L T FG+V G+ G +G+ GP+L++L Sbjct: 264 LGLAIYALLVITNVDNLIRFILQKKLADIHPLITVFGVVIGLSLFGFMGIIFGPLLVSL 322 >gi|159906093|ref|YP_001549755.1| hypothetical protein MmarC6_1711 [Methanococcus maripaludis C6] gi|159887586|gb|ABX02523.1| protein of unknown function UPF0118 [Methanococcus maripaludis C6] Length = 336 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 32/252 (12%) Query: 118 WASELWTKHLSHPQSLKILSE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM----- 170 + S L ++++ ILSE TFLK I + A + Y L ++F+ Sbjct: 100 FVSYLGLQNIAQEDLNPILSELWTFLKPT----INKMAEQI------YGLPLLFIKGMIT 149 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGL 227 + ++F +DG D++ H+ Y + R + + ++ F+ + A GL Sbjct: 150 VFLTYYFLKDGHRFK---DAIMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGL 206 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + +W G+P+ V LG ++ I+ ++P GG I + +S+Y + G A LF +G Sbjct: 207 ISIAGFWAIGLPNPVTLGALSGILTLLPIVGGWTI-YMPLSLYYIAVGMYSKAILLFGFG 265 Query: 286 AIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L + D +RP LV + + G +G+ G +GP++M I++ Sbjct: 266 VIFLSLAPDFVIRPRLVNQESDIHPAIALVAFLMGPLALGVTGFALGPLIMGTFDAIFR- 324 Query: 345 SIMAIKENKEKI 356 +K K+ I Sbjct: 325 ----VKNGKDSI 332 >gi|167031767|ref|YP_001666998.1| hypothetical protein PputGB1_0752 [Pseudomonas putida GB-1] gi|166858255|gb|ABY96662.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 365 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + A + Sbjct: 207 KPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVIKGVPGAGMLAIVILMLGIAQAPATL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V IY+ A +F + D L+P L+G + +P G +GG+ Sbjct: 267 VTVPVIIYVFNTDGFTVAAIVFAVYTFVAGLADNVLKPMLLGRGVDVPMPVVLIGALGGM 326 Query: 321 RTMGLLGLFIGPVLMALIAVI-WKESIMAIKEN 352 G++GLFIGPV++ + V+ W+ + + E Sbjct: 327 VVKGIIGLFIGPVILGVTYVLFWQWVALQVPEQ 359 >gi|302670428|ref|YP_003830388.1| hypothetical protein bpr_I1065 [Butyrivibrio proteoclasticus B316] gi|302394901|gb|ADL33806.1| hypothetical protein bpr_I1065 [Butyrivibrio proteoclasticus B316] Length = 382 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 83/351 (23%), Positives = 154/351 (43%), Gaps = 29/351 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISK-----KEESSTF-LAVIATVSVMCLFIVPLLF 80 L G+ PV+S +I+ + P+ F K K ES+ + L+V T+ V+ L +V LLF Sbjct: 42 LYGYIKPVVSGMIVAYIFNPLSKVFNDKVFRKMKNESAKWKLSVCCTIIVIVLAVV-LLF 100 Query: 81 LFYYGML--EMKELVSKV--VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + VS V +A G+ +D G +++ EL + L + Sbjct: 101 VALIPQLADSISTFVSNVDGYVATTQGVLRDLEKNDTTG-LFSGELGALASFTDKILDKI 159 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR--DGFSISQQLDSLGE- 193 E F +N + + ++ G D ++ I I L R +GF+ +L E Sbjct: 160 GEYF--SNNVGNVVTTSASIGKSVFDAVIAFILAIYLLLDKTRLKNGFARFTRLIMKPEN 217 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL----AGVPSHVALGVITA 249 H A + + R +IR ++ I+ EG+++G+ + AG+P V + VI Sbjct: 218 HENVAIF--LDRCNSIIIR--YISFDIV---EGIIVGAVNLIFMLIAGMPYSVLISVIVG 270 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + P PI + ++L+ N + A + + I L+P L G + + Sbjct: 271 VTNLAPTFGPIVGCVIGAFILVLVNPWYAVAFIAFTIVLQTIDGYILKPRLFGESLGVSP 330 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM-AIKENKEKISSN 359 L +V G R G++G+ + A+I +W++ ++ ++E K+ N Sbjct: 331 LMILIAIVVGGRLFGVVGILLAIPFAAIIDFVWRDYVLKKLEERHAKVYHN 381 >gi|301058702|ref|ZP_07199703.1| putative ATP synthase F0, A subunit [delta proteobacterium NaphS2] gi|300447266|gb|EFK11030.1| putative ATP synthase F0, A subunit [delta proteobacterium NaphS2] Length = 370 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 15/295 (5%) Query: 15 MIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ ++ +S FL + F + A + P+Y F + ++ + ++ Sbjct: 11 LILLVLAISALFLSMIRDFLMALFLAALSSAMVHPLYKRFERRFGGRRGPASITTLLLMV 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++PL+ L + + ++ V QH + P LS+ + + +H++ + Sbjct: 71 ILVLIPLVGLLGIVVGQAIKVGESVTPWIQHQVAQPGALSE----LLQKLPFYEHIAPYR 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L F S F M + + + +FFF DG + Q++ Sbjct: 127 EVIFQKAGALVGTVSKFFINSLSSFTMGTVSFLFMFFLFLYTMFFFLMDGDKLLQKI--- 183 Query: 192 GEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + R++ + V R+T G +I I +G + G A W+ G+PS V G I Sbjct: 184 -LYYLPLEDQDEQRLLKRFTSVTRATLKGTAVIGIIQGGLAGLALWVVGIPSAVFWGAIM 242 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A++++IPG G + + V I L+ G+ L L+ + + +D LRP LVG Sbjct: 243 AVLSVIPGIGTGLVWGPVGIVLIAGGHYGKGIGLILFCGVVVGSIDNFLRPRLVG 297 >gi|134045790|ref|YP_001097276.1| hypothetical protein MmarC5_0751 [Methanococcus maripaludis C5] gi|132663415|gb|ABO35061.1| protein of unknown function UPF0118 [Methanococcus maripaludis C5] Length = 336 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 22/247 (8%) Query: 118 WASELWTKHLSHPQSLKILSE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + L ++++ +ILSE TFLK I + A + I L + +I + + + Sbjct: 100 FVNYLGLQNIAQEDLNRILSELWTFLKPT----INKMAEQIYGIPLLFIKGLITVFLT-Y 154 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F +DG D++ H+ Y + R + + ++ F+ + + GL+ + Sbjct: 155 YFLKDGHRFK---DAIMPHVPEVYHVQTELFIRKLNEAYKNLFVVNALTSFTVGLISIAG 211 Query: 233 YWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 +W G+P+ V LG ++ I+ ++P GG I + +S+Y + G A LF +G I L Sbjct: 212 FWAIGLPNPVTLGALSGILTLLPIVGGWTI-YMPLSLYYIAVGMYTKAILLFGFGVIFLS 270 Query: 291 IV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + D +RP LV + + G +G+ G +GP++M I++ + Sbjct: 271 LAPDFAIRPRLVNHESDIHPAIALVAFLMGPLALGVTGFALGPLIMGTFDAIFR-----V 325 Query: 350 KENKEKI 356 K K+ I Sbjct: 326 KNGKDSI 332 >gi|28901438|ref|NP_801093.1| hypothetical protein VPA1583 [Vibrio parahaemolyticus RIMD 2210633] gi|153839443|ref|ZP_01992110.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|260362991|ref|ZP_05775860.1| hipothetical membrane protein [Vibrio parahaemolyticus K5030] gi|260880278|ref|ZP_05892633.1| hipothetical membrane protein [Vibrio parahaemolyticus AN-5034] gi|260896661|ref|ZP_05905157.1| hipothetical membrane protein [Vibrio parahaemolyticus Peru-466] gi|28809985|dbj|BAC62926.1| putative membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747032|gb|EDM58020.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|308085424|gb|EFO35119.1| hipothetical membrane protein [Vibrio parahaemolyticus Peru-466] gi|308091913|gb|EFO41608.1| hipothetical membrane protein [Vibrio parahaemolyticus AN-5034] gi|308112310|gb|EFO49850.1| hipothetical membrane protein [Vibrio parahaemolyticus K5030] Length = 381 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 7/170 (4%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F Y + S++ L ++ K + ++ I+S LG+ +A + L++G+ ++ Sbjct: 184 FMTYSE--SLASGLQTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFF 241 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + GVP+ L +I I+ + A ++ V Y+ + + AT +W A+ + + Sbjct: 242 VFGVPAAGLLTLILMILCIAQLPALLAVLPVIGYMYMTQDSTTATMFTVW-AVVGALSEN 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+P +G + +P G +GG+ G++GLF+G V++A IW E Sbjct: 301 LLKPMFMGRGVDVPMPVILLGAIGGMLFYGIVGLFLGAVILA----IWYE 346 >gi|311106377|ref|YP_003979230.1| hypothetical protein AXYL_03195 [Achromobacter xylosoxidans A8] gi|310761066|gb|ADP16515.1| hypothetical protein AXYL_03195 [Achromobacter xylosoxidans A8] Length = 376 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 148/335 (44%), Gaps = 25/335 (7%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SLY L+ F ++ A I +WP+ + I + ++ + T+ V+ LF++ L Sbjct: 28 SLYILRPFLPGLVWATTIVVATWPVMLA-IQRYCGGRRWIGTL-TMLVILLFVI---VLP 82 Query: 83 YYGMLEMKELVSKVVLANQHGIP------VPRWLSDIP--GGMWASELWTKHLSHPQSLK 134 Y ++ L S ++A +P P W+ IP G A E T + L Sbjct: 83 LYEVISTLALHSGTIMAAVKSLPDYALLAPPAWVQGIPLVGPKIAHEWQTLSDAGAGGLL 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 E +L T+ + ++ A+ G + ++++ I Y G + Sbjct: 143 AKLEPYL-TSAVTWLLGHAAIVGAFMMHMLITVVVAGI----LYTKGEVAVDFVRRFFNR 197 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L ++ + IR+ LG+ + A+ + + G W+AGVP A G++TA+M M+ Sbjct: 198 LAGQRGLAAVKLAGQAIRAVALGIVVTAVVQSGLGGIGLWIAGVP---AAGILTALMVML 254 Query: 255 ---PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 G + ++L A L +W A+ + ++D LRP L+ + L L Sbjct: 255 CLAQLGPFLPMLGGVVWLFQNDMKLAAAVLLVW-AVLVAMLDNLLRPLLIKRGVNLSLLL 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG+ G++GLFIGPV++A+ + K I Sbjct: 314 ILVGVLGGLFAFGIVGLFIGPVILAVTHTLLKAWI 348 >gi|260899709|ref|ZP_05908104.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ4037] gi|308106878|gb|EFO44418.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ4037] gi|328469371|gb|EGF40317.1| hypothetical protein VP10329_10821 [Vibrio parahaemolyticus 10329] Length = 381 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 7/170 (4%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F Y + S++ L ++ K + ++ I+S LG+ +A + L++G+ ++ Sbjct: 184 FMTYSE--SLASGLQTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFF 241 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + GVP+ L +I I+ + A ++ V Y+ + + AT +W A+ + + Sbjct: 242 VFGVPAAGLLTLILMILCIAQLPALLAVLPVIGYMYMTQDSTTATMFTVW-AVVGALSEN 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+P +G + +P G +GG+ G++GLF+G V++A IW E Sbjct: 301 LLKPMFMGRGVDVPMPVILLGAIGGMLFYGIVGLFLGAVILA----IWYE 346 >gi|60681100|ref|YP_211244.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|253563134|ref|ZP_04840591.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265762981|ref|ZP_06091549.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60492534|emb|CAH07305.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|251946910|gb|EES87192.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263255589|gb|EEZ26935.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301162588|emb|CBW22135.1| putative transmembrane protein [Bacteroides fragilis 638R] Length = 332 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 6/197 (3%) Query: 141 LKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L ++ + FI + G + + +++ ++ L+F G + +D + Sbjct: 115 LGSDTLSFIVSLLPKIGQAVMGGISSFAVNLFVLVFVLYFMLIGGTKMEAYIDDI-LPFN 173 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP Sbjct: 174 EKNTREVTHEINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLIGVLTCFATIIPM 233 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + + V+ YL + G NA L +G I + D +R L L T FG Sbjct: 234 VGTALVWFPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFG 293 Query: 316 LVGGVRTMGLLGLFIGP 332 +V G+ G +G+ GP Sbjct: 294 VVIGLSLFGFMGVIFGP 310 >gi|254173525|ref|ZP_04880197.1| membrane protein [Thermococcus sp. AM4] gi|214032217|gb|EEB73047.1| membrane protein [Thermococcus sp. AM4] Length = 335 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 4/97 (4%) Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A ++YL ++G++ A + ++GA+ + + D T+RP LV +L F G++GG Sbjct: 242 AGAVYLYMRGSLLGAIGISVYGAVLVSPLPDYTIRPMLVAKDAELDETLVFIGMLGGTWA 301 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL GL +GPV++++ V+ KE K N E +++ Sbjct: 302 FGLKGLLLGPVILSIALVLLKE---WKKRNSEGGAAD 335 >gi|53712882|ref|YP_098874.1| hypothetical protein BF1591 [Bacteroides fragilis YCH46] gi|52215747|dbj|BAD48340.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 332 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 2/171 (1%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +++ ++ L+F G + +D + ++++ + ++RS +G+ ++A Sbjct: 141 FAVNLFVLVFVLYFMLIGGTKMEAYIDDI-LPFNEKNTREVTHEINMIVRSNAIGIPLLA 199 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 + +G V Y++ G P+ +GV+T +IP G + + V+ YL + G NA L Sbjct: 200 VIQGGVALIGYFIFGAPNAWLIGVLTCFATIIPMVGTALVWFPVAAYLALTGEWANAIGL 259 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 +G I + D +R L L T FG+V G+ G +G+ GP Sbjct: 260 AAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLSLFGFMGVIFGP 310 >gi|284165585|ref|YP_003403864.1| hypothetical protein Htur_2311 [Haloterrigena turkmenica DSM 5511] gi|284015240|gb|ADB61191.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 393 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 6/130 (4%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 +++++ + ++A + ++LG + G+P+ V L V+T ++ ++P GA + VSI Sbjct: 199 HLMQASVISNVLVAAIQAVMLGVGLAVLGIPAVVLLTVLTFVLTLLPLVGAFGVWLPVSI 258 Query: 268 YLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 YL+ G A L ++G LF+ D LRP L+G + G+ GG+ T G Sbjct: 259 YLVAIGRPVAAAALAVYG---LFVTVSDTYLRPALIGRTSAINSAIIVVGIFGGLITFGA 315 Query: 326 LGLFIGPVLM 335 +GLF+GPV++ Sbjct: 316 VGLFVGPVVL 325 >gi|296127433|ref|YP_003634685.1| hypothetical protein Bmur_2416 [Brachyspira murdochii DSM 12563] gi|296019249|gb|ADG72486.1| protein of unknown function UPF0118 [Brachyspira murdochii DSM 12563] Length = 378 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 14/185 (7%) Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG + +Q+ +L P K R++ +V I+ G + +G+ Y + Sbjct: 187 DGEYLMEQVRTL----VPIERKYFDRLIKQVSEGIKGIVFGNLFTGLFQGVCAFIVYSVF 242 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 GV + +T I + +P G I + + + +I G + A + + I D Sbjct: 243 GVANSFTFAFLTIIASFMPIIGTTIIWLPLGVLFIINGQLIKAIIFVICSWFFITIPDNF 302 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK----ESIMAIKE 351 +RP L+G I+L L FF ++GGV GL G+ +GP+ L I K E I+ K Sbjct: 303 VRPLLLGNRIELHPLFIFFAILGGVLFFGLSGIILGPLTFILFFEIMKIFNEERILEAK- 361 Query: 352 NKEKI 356 KEKI Sbjct: 362 -KEKI 365 >gi|116747741|ref|YP_844428.1| hypothetical protein Sfum_0292 [Syntrophobacter fumaroxidans MPOB] gi|116696805|gb|ABK15993.1| protein of unknown function UPF0118 [Syntrophobacter fumaroxidans MPOB] Length = 391 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGS 231 F+ RDG + LD+ P + R+ + V RS +G + A+ +GL+ G Sbjct: 186 FYLVRDG---AAMLDA-ARGFSPLRKDQEDRLLGGIRVVARSVLMGAFMTALCQGLIGGI 241 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 L G+P + G + + IP G + + ++ YL++ G +A L +W + + Sbjct: 242 GVALIGLPG-LFWGTVMGFASFIPIVGTALVWVPMAAYLVLLGTWKSALFLAIWCIVLVG 300 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP-------VLMALIAVIWK 343 +D +RP+L+ G L F ++G V+ GL G+ GP +++ L ++ Sbjct: 301 SIDNFVRPYLMRGQSNLSPFYIFLSIIGAVQYFGLTGILYGPLIVSFAMIMLYLYGAEYR 360 Query: 344 ESIMAIKENKEKISSN 359 E + K + Sbjct: 361 EDLAESKSGTHAVEEK 376 >gi|163801373|ref|ZP_02195272.1| nicotinate phosphoribosyltransferase [Vibrio sp. AND4] gi|159174862|gb|EDP59662.1| nicotinate phosphoribosyltransferase [Vibrio sp. AND4] Length = 386 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 7/170 (4%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F Y + S++ L ++ K + ++ I+S LG+ +A + L++G+ ++ Sbjct: 184 FMTYSE--SLASGLSTIAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFF 241 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + GVP+ L ++ I+ + A ++ V Y+ + + AT +W + + + Sbjct: 242 IFGVPAAGLLTLVLMILCIAQLPALLAVLPVIGYMYMTKDTSTATMFTVW-VVVAALSEN 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +P L+G + +P G +GG+ G++GLF+G V++A IW E Sbjct: 301 LFKPMLMGRGVSVPMPVILLGAIGGMLFYGIVGLFLGAVILA----IWYE 346 >gi|42525852|ref|NP_970950.1| hypothetical protein TDE0336 [Treponema denticola ATCC 35405] gi|41815902|gb|AAS10831.1| membrane protein, putative [Treponema denticola ATCC 35405] Length = 372 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 23/184 (12%) Query: 190 SLGEHLFPAYWKKISRIVPKVIRST---FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 SL +H P + ++ K+ T F G+ +++ + L Y + GV S + L + Sbjct: 195 SLLKHAIPIDNETSDKLFSKIGEITTNLFKGLFLVSFYQCLASFIVYLIFGVQSALLLAI 254 Query: 247 ITAIMAMIP----------GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +T +P G + FT L+KG IF L + G+I F+ D L Sbjct: 255 LTFFSTFLPIVGCGLIWFPVGVGLCFTDG----LVKGLIF----LVVAGSIISFM-DNFL 305 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 RPF + IK+ L FF ++GGV G+ +GP+++ L I + + I+E KE Sbjct: 306 RPFFLKDRIKIHPLLIFFSMLGGVSMFSFDGIILGPMIVILFFTILDMA-LDIEEKKEND 364 Query: 357 SSNF 360 NF Sbjct: 365 EDNF 368 >gi|284165881|ref|YP_003404160.1| hypothetical protein Htur_2610 [Haloterrigena turkmenica DSM 5511] gi|284015536|gb|ADB61487.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 370 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 8/181 (4%) Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWKKISRIVPKVIRSTFLG 217 L+ + + + L++ DG + L L H+ + ++ + VI S L Sbjct: 148 LELAIGLAVCVFLLYYLLVDGDDLVAWLGDVAPLEPHVRDELFGEVRVVTWAVIHSHVL- 206 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A+ +GL+ G + G+P+ VI +++ +P G + + + YL G+ Sbjct: 207 ---VAVVQGLLGGIGLAVVGIPNAAFWTVIMILLSFLPAIGVWLVWGPAAGYLATAGDPL 263 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A L +G L +VD LR V L G++GG+ +G++GLF+GPVL+A Sbjct: 264 AAVALLAYGLTILGLVDNYLRAIFVDRGSGLHPAAVIVGVIGGIYLLGVMGLFLGPVLLA 323 Query: 337 L 337 + Sbjct: 324 V 324 >gi|45358507|ref|NP_988064.1| hypothetical protein MMP0944 [Methanococcus maripaludis S2] gi|44921265|emb|CAF30500.1| hypothetical protein MMP0944 [Methanococcus maripaludis S2] Length = 336 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 15/188 (7%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++F +DG+ D++ H+ Y + R + + ++ F+ + A GL+ + Sbjct: 154 YYFLKDGYRFK---DAVMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIA 210 Query: 232 AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 +W G+P+ V LG ++ I+ ++P GG I + +S+Y + G A LF +G + L Sbjct: 211 GFWAIGLPNPVTLGALSGILTLLPIVGGWTI-YMPLSVYYIAVGMYSKAILLFGFGVLFL 269 Query: 290 FIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + D +RP LV + + G +G+ G +GP++M I++ Sbjct: 270 SLAPDFVIRPRLVNHESSIHPAFALVAFLMGPLALGITGFALGPLIMGTFDAIFR----- 324 Query: 349 IKENKEKI 356 +K K+ I Sbjct: 325 VKNGKDSI 332 >gi|329295579|ref|ZP_08252915.1| hypothetical protein Pstas_00795 [Plautia stali symbiont] Length = 123 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP G+ I + +I+ G ++ L + I + +VD LRP LVG K+ Sbjct: 2 AFLSLIPAVGSAIVWVPAAIFFFATGALWKGLFLVGFFVIVVGLVDNILRPLLVGKDTKM 61 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +GG+ G+ G IGP++ AL W ++++ ++N+E + Sbjct: 62 PDYLILIATLGGMEVYGINGFVIGPLIAALFIACW--NLLSGRDNRENV 108 >gi|257457925|ref|ZP_05623084.1| putative membrane protein [Treponema vincentii ATCC 35580] gi|257444638|gb|EEV19722.1| putative membrane protein [Treponema vincentii ATCC 35580] Length = 362 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKI 203 D I R+A+ ++ LS++FM AL+F + DG Q L S+ P + +K+ Sbjct: 154 DTIIRYATGIAKNIGNFVLSLLFMCFALYFLFIDG----QYLGSVFVTAIPIQVSEGQKL 209 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGA--- 258 + + I + F+G +++I + Y + V + L +T + +P G A Sbjct: 210 AAKIKDTITNLFMGYFLVSICQFAAAFIVYTIFRVEGALLLSFLTFFSSFLPFFGCALVW 269 Query: 259 -PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + L+KG +F F +I D LRP + I++ L FF ++ Sbjct: 270 LPLGVEILLTAGLLKGILFLCVAGFFISSI-----DNFLRPMFLQNRIQIHPLLIFFSIL 324 Query: 318 GGVRTMGLLGLFIGPVLMALI 338 GG+R L G+ +GP+ + L+ Sbjct: 325 GGIRFFKLNGIVLGPMFVILL 345 >gi|167624368|ref|YP_001674662.1| hypothetical protein Shal_2445 [Shewanella halifaxensis HAW-EB4] gi|167354390|gb|ABZ77003.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 383 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 82/364 (22%), Positives = 153/364 (42%), Gaps = 34/364 (9%) Query: 9 QGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI++V + +K F PVL II PI + A I Sbjct: 19 ESAIRIGLLFILIVWTFDIIKPFVIPVLWGAIIAVALMPITQKLERALKGRRGLAASILA 78 Query: 68 VSVMCLFIVPLLFL---FYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPG-GMWASEL 122 ++ + L I P + + G+ M E V+ + IP P + ++DIP G ++ Sbjct: 79 LAGIILLIAPFWIVSSSIFDGVTHMIE----VLQSGDVDIPGPTQKVADIPLIGDKLYDI 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRF-------ASRFGMIFLDYCLSIIFMIIALF 175 W L T L+ + F+P+ A G + II + IA Sbjct: 135 WA-----------LFATNLEKAVLHFLPQIKTGVTAAAGMLGSSLGSLVMFIISLAIAGG 183 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S + + ++ + + ++ + + IRS LG+ +A + +++GSA + Sbjct: 184 FMAHAEKS-AAAVSTVAVRVAGKHGEEWTSLTAATIRSVLLGVVGVAFIQSILIGSALFT 242 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P+ I I+ + + + Y+ + AT +W I I D Sbjct: 243 FSIPAAGIFTFIVFILGIAQLPPLLVVLPLIFYVFSTHDSTPATIFTVWVLIA-GISDSF 301 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+P L+G + +P G +GG+ T G++GLF+G V++A IW E + + +E+ Sbjct: 302 LKPMLMGRGVDVPMPVILIGAIGGMITAGIIGLFLGAVILA----IWYELFITWLKTEEE 357 Query: 356 ISSN 359 ++ Sbjct: 358 ATTG 361 >gi|303246923|ref|ZP_07333199.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491630|gb|EFL51513.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 362 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 26/262 (9%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 H +P+P W G + S + + + ET ++G D F S G Sbjct: 119 HALPLPNWAK---GYLDVSSIDLRKI----------ETLALSSGGDIGLWFLSA-GKGVA 164 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGM 218 L ++ +++ LF+ +G ++L L P + I+ + V ++ LG Sbjct: 165 SMGLQLLVLVMFLFYLLAEG----ERLTELLRKASPLRRDQEDAIIARFKAVSQAVLLGG 220 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIF 276 ++ G+V G W+AG+ S + G + I ++IP G + I A+ I L+ G++ Sbjct: 221 LGTSVAIGVVTGIGLWIAGI-SPLLWGAVAVIASLIPVVGLSLIMLPAI-ISLIATGSVK 278 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A L L+ + + VD +RP + G ++ + F ++GGV G LGL GP+ ++ Sbjct: 279 MAIFLALYWLLVVSSVDNVVRPLFMRGTARMSLVWVFVSIIGGVLMFGPLGLLYGPLALS 338 Query: 337 LIAVIWKESIMAIKENKEKISS 358 I+ ++ E + + SS Sbjct: 339 -ISFLFLEIFFDAQNEADDTSS 359 >gi|218514462|ref|ZP_03511302.1| putative permease protein [Rhizobium etli 8C-3] Length = 62 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/33 (69%), Positives = 26/33 (78%) Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 1 GGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR 33 >gi|315638162|ref|ZP_07893344.1| acid membrane antigen A family protein [Campylobacter upsaliensis JV21] gi|315481698|gb|EFU72320.1| acid membrane antigen A family protein [Campylobacter upsaliensis JV21] Length = 347 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/324 (19%), Positives = 131/324 (40%), Gaps = 33/324 (10%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K F + A ++ + +++ F+S ++ + + T ++ LF P F Y + Sbjct: 24 KSFLLVMAIAALMAVATSNLHAKFLSLTKQRKLLASTLTTSFMILLFFAP----FIYTSI 79 Query: 88 EMKELVSK--VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+ + + + L Q + + +P + E K L L Sbjct: 80 ELAKALKNFDINLITQTLDYIKHYEFSLPSSLEFLEPKIKEFIAELDLNSLYR-----QA 134 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + F +D L I +F+F+ + + +L + + P ++ Sbjct: 135 LTYASSFTKSGAKFLMDMAL------ICVFYFFANLY--GTELVIYLKSIVPINKTELDE 186 Query: 206 I---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 I V V+ M I+AI +G + G + G + +GVI A+ ++IP G + Sbjct: 187 ILGEVGNVMAVVLYSMIIVAIFQGALFGIIMFFYGYDG-LLMGVIFAVSSLIPAVGGALV 245 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPT 312 + VS+Y GN+ +A + ++ I + F+ D ++P LV P + L Sbjct: 246 YVPVSLYTFASGNLSSAIVILIYSFIMISFVADTLIKPLIIKWINEKLVKTPTNINELLI 305 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMA 336 F ++ G+ + G G+ +GP ++ Sbjct: 306 FLAMIAGISSFGFWGIILGPAILT 329 >gi|262044145|ref|ZP_06017219.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038517|gb|EEW39714.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 137 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 ++GVP L V+ ++ G + I+L G+ T L +W + + +D Sbjct: 2 VSGVPYAALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCV-VGTMDN 60 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ Sbjct: 61 VIRPVLIRMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAV 103 >gi|86133547|ref|ZP_01052129.1| protein of unknown function DUF20 [Polaribacter sp. MED152] gi|85820410|gb|EAQ41557.1| protein of unknown function DUF20 [Polaribacter sp. MED152] Length = 343 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 8/173 (4%) Query: 189 DSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 DSL E++ P K + I + ++RS +G+ ++AI +G++ + + G+ Sbjct: 170 DSLYEYI-PISNKNLKIIGAESQAMVRSNAIGIPLVAIAQGIIALIGFLIFGIRDPFFWF 228 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I I +MIP G I V I + GN A + ++G + + D +R FL+ Sbjct: 229 IIVTIGSMIPFVGTLIGILPVFILSMSYGNTVGAWGILIYGLVVVGSTDNIIRLFLLKKL 288 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKE 354 + L T G++ GV G +GL GP+L++L V I+K+ A+ E K+ Sbjct: 289 DNVHPLITLIGVIVGVPLFGFIGLIFGPLLISLFLVVVRIYKKEFGALIEEKK 341 >gi|330508908|ref|YP_004385336.1| hypothetical protein MCON_3236 [Methanosaeta concilii GP-6] gi|328929716|gb|AEB69518.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 408 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLW 284 GL+ + L GV G+ TAI A++P G PI F + IY L+ GN + LF++ Sbjct: 238 GLLAAIGFALFGVSYPFLWGLTTAIFALLPMIGPPIIFVPICIYFLLIGNYLSGIGLFIY 297 Query: 285 GAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I + + + +RP L K+ T + +G LG IGP+L + ++ Sbjct: 298 SLIFINTIPENVIRPKLASQGAKIHPSITLLAFAAPIFVVGFLGFIIGPLLYGFLLAAFR 357 Query: 344 ESIMAIKEN 352 + +KE Sbjct: 358 TRVYMLKEE 366 >gi|315443121|ref|YP_004076000.1| permease [Mycobacterium sp. Spyr1] gi|315261424|gb|ADT98165.1| predicted permease [Mycobacterium sp. Spyr1] Length = 391 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 12/170 (7%) Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L+ LG+ + Y KI +V ++ F IIA +G+ + ++AG+ + + Sbjct: 189 RDLNPLGDKVSDIYLAKIGAMVSATVKGQF----IIAACQGVAGAISVYIAGIHNGFFMF 244 Query: 246 VI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI +++ IP G+ I + I + I GN + ++ I +D LRPFLV Sbjct: 245 VIFLTVLSFIPLGSGIVVIPLGIGMAIFGNPVGGIFVVVFHIIATTNIDNLLRPFLVPRS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA-------VIWKESIM 347 L + G++ G +G+ +GPVLM +I V+++++ M Sbjct: 305 AHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYRVVYRDAPM 354 >gi|242398490|ref|YP_002993914.1| hypothetical protein TSIB_0499 [Thermococcus sibiricus MM 739] gi|242264883|gb|ACS89565.1| hypothetical protein TSIB_0499 [Thermococcus sibiricus MM 739] Length = 329 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%) Query: 151 RFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 R + + L Y LSI I I+ + S+S +L SL P + + Sbjct: 116 RVSEKLSEYLLSYTLSIPKLLLQAIIFIVVFYGILIHSHSLSAELYSL----LPEERRDL 171 Query: 204 SRIVPKVIRSTFLGMT----IIAIGEGLVLGSAYWL---AGVPSHVALGVITAIMAMIPG 256 + + R T + ++++ +G++L +++ A + +A G++ ++ ++P Sbjct: 172 GIELIEKARDTLNAILRTWLMLSVSKGIILTLGFYVFRVADLSGSIAAGIVCVVLELLPV 231 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLPFLPT 312 G + + +IYLL +G IF ++GA L I D T+RP LV K+ Sbjct: 232 IGGWLVWLVGAIYLLTQGQIFAGIMFAIYGA--LLISPGPDITIRPKLVAEGAKMNSALA 289 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI---WKES 345 G+ GG+ G+ G+ IGPV + L+ + WKE Sbjct: 290 LIGIFGGIMAFGIKGIVIGPVALGLLLTLLEEWKEQ 325 >gi|315928095|gb|EFV07414.1| outer membrane domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 153 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 11/129 (8%) Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y N+ Sbjct: 8 MVIVAIFQGALFGLITIFYGY-DGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASNNLN 66 Query: 277 NATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G G Sbjct: 67 SALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWG 126 Query: 328 LFIGPVLMA 336 + +GP ++ Sbjct: 127 IILGPAILT 135 >gi|325287380|ref|YP_004263170.1| hypothetical protein Celly_2482 [Cellulophaga lytica DSM 7489] gi|324322834|gb|ADY30299.1| protein of unknown function UPF0118 [Cellulophaga lytica DSM 7489] Length = 339 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 1/133 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K I + + +++ LG+ ++A+G+GLV +++ G+ + I +MIP G+ Sbjct: 183 KTIGKEITANVKANALGIPLVALGQGLVALLGFYIFGIEDPFFWAAVVTIGSMIPFVGSA 242 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + V I L GN F A + ++G + + D R +++ + L T G++ G Sbjct: 243 LGTVPVFILALSNGNTFQAWGILIYGLVAIGATDNIFRLYILKRLDDVHPLITLVGVLVG 302 Query: 320 VRTMGLLGLFIGP 332 V G +GL GP Sbjct: 303 VPLFGFIGLIFGP 315 >gi|108801082|ref|YP_641279.1| hypothetical protein Mmcs_4118 [Mycobacterium sp. MCS] gi|119870223|ref|YP_940175.1| hypothetical protein Mkms_4193 [Mycobacterium sp. KMS] gi|108771501|gb|ABG10223.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119696312|gb|ABL93385.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 400 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/332 (20%), Positives = 145/332 (43%), Gaps = 37/332 (11%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YFL+GFF ++ A + + P+Y ++ + A + ++ + I+P + + Sbjct: 34 YFLRGFFILIVVAAVGAYLFTPLYERL--RRRFGTGLSATLTLLAAVLTVIIPATLVVFL 91 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWL--SDIP-----GGMWASELWTK------HLSHPQ 131 ++++ ++V+ V NQ W+ +D+ +A++L K L+ P Sbjct: 92 AIVQITQMVTTV---NQ-------WMATTDVSTLGDRAMKFANDLIEKVPFLDFRLT-PD 140 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL-FFFYRDGF-SISQQLD 189 +L+ T + G + G + ++IF+ + + RD ++ ++L+ Sbjct: 141 TLRDGVVTVSQRVGEWLLGVLQGAVGGVLGALAATVIFLYVFISLLVNRDKIRTLIRRLN 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL---GV 246 LGE + Y K +V ++ F +IA+ +G+ + ++AG H + Sbjct: 201 PLGEDITDLYLAKTGAMVKGTVKGQF----VIALCQGVAGAISIYVAGF--HEGFFFFAI 254 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + +++IP G+ I I + + GN+ + + + + +D LRP LV + Sbjct: 255 VLSALSVIPLGSGILSIPFGIGMALFGNVIGGVFVVAFHLLVVTNIDNVLRPMLVPKAAR 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G+ G G+ +GPVLM +I Sbjct: 315 LDPALMLLAVFSGIAMFGFWGIVLGPVLMIII 346 >gi|319953361|ref|YP_004164628.1| hypothetical protein Celal_1829 [Cellulophaga algicola DSM 14237] gi|319422021|gb|ADV49130.1| protein of unknown function UPF0118 [Cellulophaga algicola DSM 14237] Length = 342 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 4/160 (2%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K I + V ++RS LG+ ++A +G+V + + + VI + +MIP G Sbjct: 183 KIIGKDVQAMVRSNALGIPLVAFAQGIVALIGFLIFNIEQPFFWAVIVFVGSMIPFIGTF 242 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I V I L GN F A + ++G + + D LR ++ + L T G++ G Sbjct: 243 IGTLPVFILTLASGNDFQAWGILIYGLVVIGSTDNLLRLVILKRIDNVHPLITLIGVIVG 302 Query: 320 VRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEKI 356 V G +GL GP+L++L + I+K+ N+E++ Sbjct: 303 VPLFGFIGLIFGPLLISLFLIVLRIYKDEYGQEVHNQEQL 342 >gi|291513866|emb|CBK63076.1| Predicted permease [Alistipes shahii WAL 8301] Length = 350 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 1/138 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 + + R + ++RS + + ++A+ +G+V Y GVP + GV+T ++P G Sbjct: 183 RSVMREIHMIVRSNAIVIPLLAVSQGVVAYVGYLAFGVPEPLFWGVLTCFATILPIVGTA 242 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + ++ Y+ + GN L ++G + + VD +R + + L T FG+ G Sbjct: 243 LVWLPLAAYMSLDGNWGQGVGLVMYGTLVVTQVDNLVRMVMQKKMADVHPLITIFGVFIG 302 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G +G+ GP+++A+ Sbjct: 303 LSLFGFMGVIFGPLMLAM 320 >gi|212635770|ref|YP_002312295.1| hypothetical protein swp_2989 [Shewanella piezotolerans WP3] gi|212557254|gb|ACJ29708.1| Membrane protein, putative [Shewanella piezotolerans WP3] Length = 386 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 79/366 (21%), Positives = 155/366 (42%), Gaps = 33/366 (9%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI++V Y +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALMPLTQKLERALKGRRGLAATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG---IPVP-RWLSDIPG-GMWASEL 122 + + L I P + + + + VS + Q G IP P + ++DIP G + Sbjct: 79 LGSIILLITPFILVSS----SIFDGVSHTIAVLQSGEIRIPGPTQKIADIPLIGDKLFDA 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFF--- 176 W L T L+ I F+P+ S G + +++ I++L Sbjct: 135 WA-----------LFSTNLEKAVIHFLPQIKSAVGTMAGVLGSGVGTLVMFIVSLAIAGG 183 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F + + ++ + + ++ + + IRS LG+ +A + +++GSA + Sbjct: 184 FMAHAEKSAAAVSTVAVKVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQAILIGSALFTF 243 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P+ I I+ + + + ++ + AT +W I + D L Sbjct: 244 SIPAAGLFTFIVFILGIAQLPPLLVVLPLIFFVFSTHDSTPATIFTVW-VIIAGVSDSFL 302 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENK 353 +P L+G + +P G +GG+ T G++GLF+G V++A+ + + W +S +K Sbjct: 303 KPMLMGRGVDVPMPVILIGAIGGMITAGIIGLFLGAVVLAIWYELFITWLKS--EDGRDK 360 Query: 354 EKISSN 359 + +SS+ Sbjct: 361 DALSSD 366 >gi|169632703|ref|YP_001706439.1| PerM family permease [Acinetobacter baumannii SDF] gi|169795048|ref|YP_001712841.1| PerM family permease [Acinetobacter baumannii AYE] gi|184159168|ref|YP_001847507.1| permease [Acinetobacter baumannii ACICU] gi|213158290|ref|YP_002320341.1| permease [Acinetobacter baumannii AB0057] gi|215482597|ref|YP_002324789.1| hypothetical protein ABBFA_000876 [Acinetobacter baumannii AB307-0294] gi|239501015|ref|ZP_04660325.1| hypothetical protein AbauAB_01772 [Acinetobacter baumannii AB900] gi|260556531|ref|ZP_05828749.1| permease [Acinetobacter baumannii ATCC 19606] gi|294836605|ref|ZP_06781288.1| hypothetical protein A60131_01655 [Acinetobacter sp. 6013113] gi|294840701|ref|ZP_06785384.1| hypothetical protein A6014_02507 [Acinetobacter sp. 6014059] gi|294860824|ref|ZP_06798593.1| hypothetical protein A6013_19681 [Acinetobacter sp. 6013150] gi|301347426|ref|ZP_07228167.1| hypothetical protein AbauAB0_14283 [Acinetobacter baumannii AB056] gi|301513661|ref|ZP_07238898.1| hypothetical protein AbauAB05_18835 [Acinetobacter baumannii AB058] gi|301596501|ref|ZP_07241509.1| hypothetical protein AbauAB059_11822 [Acinetobacter baumannii AB059] gi|169147975|emb|CAM85838.1| putative permease (PerM family) [Acinetobacter baumannii AYE] gi|169151495|emb|CAP00258.1| putative permease (PerM family) [Acinetobacter baumannii] gi|183210762|gb|ACC58160.1| predicted permease [Acinetobacter baumannii ACICU] gi|193078086|gb|ABO13021.2| putative permease (PerM family) [Acinetobacter baumannii ATCC 17978] gi|213057450|gb|ACJ42352.1| permease [Acinetobacter baumannii AB0057] gi|213987714|gb|ACJ58013.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260409790|gb|EEX03090.1| permease [Acinetobacter baumannii ATCC 19606] gi|322509082|gb|ADX04536.1| Putative permease [Acinetobacter baumannii 1656-2] gi|323519112|gb|ADX93493.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 397 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 50/279 (17%) Query: 111 SDIPGGM-W-ASEL--WTKHLSHPQSLKILSE-------TFLKTN----GIDFIPRFASR 155 IP G+ W +EL W H Q ++I ++ +++TN I + ++ Sbjct: 91 DSIPAGIHWINAELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAVLLKLAQ 150 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV----I 211 G+ F+ +++ + I F+F D + Q L L + A +I R V + Sbjct: 151 SGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHSVLGAFV 210 Query: 212 RSTFL-----------GMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGA 258 + FL G+ +I + GL++G LA + ++ A+G+I A++A + Sbjct: 211 KGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVIASL---- 266 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 F +LL+ G +F + A+E +I L+PFL+G I L + F ++ Sbjct: 267 -FQFGMDWTHLLLVGVVF-----MIGQAVEGYI----LQPFLLGDKIGLSPVAVVFAVLA 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G + G LG+ I + A+I V+ K ++EN E+ S Sbjct: 317 GAQLAGFLGMLIALPVAAVIVVLLKH----LRENYERSS 351 >gi|124484941|ref|YP_001029557.1| hypothetical protein Mlab_0113 [Methanocorpusculum labreanum Z] gi|124362482|gb|ABN06290.1| protein of unknown function UPF0118 [Methanocorpusculum labreanum Z] Length = 346 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 11/132 (8%) Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTA-VSIYLL----IKGNIFNATCLFLWGAI 287 + L G + + A+ A+IP P+ V IY L I+G I AT + + Sbjct: 213 FLLLGYGHEIFFSTMCALFALIPVLGPLMVIIFVGIYALCLGDIRGVILTATLGYFLTCV 272 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + D +RP L G +K+ + F G GG MGLLG +GPVL+ L ++ + Sbjct: 273 ---LTDLIIRPKLTGKRVKIRPMLMFVGFFGGAMAMGLLGFVLGPVLLILGLTAYE---I 326 Query: 348 AIKENKEKISSN 359 IKE ++K +S Sbjct: 327 FIKEGRKKNASE 338 >gi|126642639|ref|YP_001085623.1| PerM family permease [Acinetobacter baumannii ATCC 17978] Length = 370 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 50/279 (17%) Query: 111 SDIPGGM-W-ASEL--WTKHLSHPQSLKILSE-------TFLKTN----GIDFIPRFASR 155 IP G+ W +EL W H Q ++I ++ +++TN I + ++ Sbjct: 64 DSIPAGIHWINAELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAVLLKLAQ 123 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV----I 211 G+ F+ +++ + I F+F D + Q L L + A +I R V + Sbjct: 124 SGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHSVLGAFV 183 Query: 212 RSTFL-----------GMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGA 258 + FL G+ +I + GL++G LA + ++ A+G+I A++A + Sbjct: 184 KGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVIASL---- 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 F +LL+ G +F + A+E +I L+PFL+G I L + F ++ Sbjct: 240 -FQFGMDWTHLLLVGVVF-----MIGQAVEGYI----LQPFLLGDKIGLSPVAVVFAVLA 289 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G + G LG+ I + A+I V+ K ++EN E+ S Sbjct: 290 GAQLAGFLGMLIALPVAAVIVVLLKH----LRENYERSS 324 >gi|323136904|ref|ZP_08071984.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322397665|gb|EFY00187.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 386 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 132/308 (42%), Gaps = 30/308 (9%) Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASE 121 A + T++ + L I P+ ++ + +K +++ + P P + D P G W Sbjct: 79 AALMTIAGLVLIIGPVTWMGVGVIDPLKGVLAGFENGDLSVPPPPEAVKDWPLIGDWLFS 138 Query: 122 LWTKHLS--HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + H +IL + LK G +++ A G+ L + LS+ F Sbjct: 139 YWELASTNIHGALAQILPQ--LKPVG-EYLLAGARNAGLGTLKFLLSVALA----GFLLA 191 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + +L + P K + I + G+ +++ + ++ G LAGVP Sbjct: 192 SGPQLLVGIRALARRIDPTNGDKFVNLAGDTINAVSRGVMGLSLMQAVIGGLGMSLAGVP 251 Query: 240 SHVALGVITAIMAMIPGG-----APISF---TAVSIYLLIKGNIFNATCLFLWGAIELFI 291 L + ++ ++ G AP+ F T ++ + I AT ++ Sbjct: 252 GASLLTLAILVLGIVQIGPLLIVAPVIFWAWTHMTTGPALALTICMATVNYM-------- 303 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L+PFL+ + P F G++GGV G+ GLF+GPV++ AV+W+ I + Sbjct: 304 -DNVLKPFLLAHGLSTPMGVIFIGVIGGVLAHGVAGLFVGPVVL---AVVWELGKAWIAD 359 Query: 352 NKEKISSN 359 + ++ ++ Sbjct: 360 DLDETRND 367 >gi|303237018|ref|ZP_07323590.1| putative membrane protein [Prevotella disiens FB035-09AN] gi|302482798|gb|EFL45821.1| putative membrane protein [Prevotella disiens FB035-09AN] Length = 376 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 75/359 (20%), Positives = 148/359 (41%), Gaps = 25/359 (6%) Query: 12 MRWMIM----FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +RW+++ F IL + +L P A ++ + P+ + K + LAVI T Sbjct: 12 IRWVLIAALVFSILYIVNYLSHVLLPFFIAWLLAYLLNPVVNFVQHKMKVKVRALAVIIT 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ I +++ M++ E + ++ V N + W+ D W E Sbjct: 72 MLLVVAIITGVMYTIIPPMVDQFEKLGAVANRYVQQNTPSNNLTAWIKD-----WIQEYL 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + +S K +ET N I + + I L S+I ++ LFF D Sbjct: 127 PQINEYFKS-KDFTETI--KNAIPKLFTVVGQTASIVLSIVASLI-TLLYLFFILLDYDY 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + ++WK + + V + G ++A+ G++ + + G P + Sbjct: 183 LVKNFVRIFPKKHRSFWKDLMQDVETEMNKYIRGQGLVALTMGILFCIGFTIIGFPMAIG 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIF---NATCLFLWGAIELFIVDKTL 296 +G++ I+ +IP ++ ++ L+ KG F T + ++ I+L + D + Sbjct: 243 MGILIGILTLIPYLHSLALIPMAFLSLLEAADKGQNFWVVFGTAILVFAIIQL-LCDLVV 301 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P ++G + L L +G +GL I L LI WK + ENK+K Sbjct: 302 TPRIMGKTMNLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWKRYVTKEDENKQK 360 >gi|242310532|ref|ZP_04809687.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522930|gb|EEQ62796.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 353 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 23/162 (14%) Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 QQ+ SL + ++S ++ V S+ L M + +G++ G G + + LG Sbjct: 191 QQIKSL--------YDEVSAVISVVFYSSILSMVL----QGMLFGILMAFYGY-NAILLG 237 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF---- 299 V ++IP G + + V+ Y L GN NA + L+ I + I D ++PF Sbjct: 238 VFYGFASLIPVVGGTLVWLPVACYELYLGNFTNAIIITLYSIIVIATIADNGVKPFIIAF 297 Query: 300 ----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+ P+K+ + FF ++ G+ + G G+ +GP + AL Sbjct: 298 INRVLIEEPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITAL 339 >gi|154173718|ref|YP_001408692.1| acid membrane antigen A [Campylobacter curvus 525.92] gi|112802392|gb|EAT99736.1| acid membrane antigen A [Campylobacter curvus 525.92] Length = 348 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 33/327 (10%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y K F + A ++ + I F+ +E T A + T + LFI P F Sbjct: 21 VYLFKPFLLDIFIAALLAVATSNINVLFLKLTKERKTLSAALTTAVLFTLFIAP----FL 76 Query: 84 YGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y ++E+ S + N G + + +P + E K +K ++ L Sbjct: 77 YAVIELTRYASTFNMNNITGTIDYIKNYDFALPSSIEFLEPKFKEFIAQIDIKAITANIL 136 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 TN + G + + + F+++ FF G +L + P Sbjct: 137 -TN--------LANLGKLSAKFITDVAFILVFFFFAILYG----NELVIYMKKALPMKES 183 Query: 202 KISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 + I+ + V+ + I AI +GL+ + G + +G++ A M++IP G Sbjct: 184 ESGFILSEMANVMSVVLYSIIINAILQGLLFAFITIIYGYNGFL-MGILFAFMSLIPVVG 242 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLP 308 +++ +S+Y L GN A + L+ I + I D L+P LV P K+ Sbjct: 243 GVLAWAPISLYELANGNATGAIVIALYTIIVISVIADTFLKPLVIKFINDKLVKIPTKIN 302 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L FF ++ G+ T G GL +GP ++ Sbjct: 303 ELLIFFAMIAGITTFGFWGLILGPAIV 329 >gi|295135659|ref|YP_003586335.1| hypothetical protein ZPR_3833 [Zunongwangia profunda SM-A87] gi|294983674|gb|ADF54139.1| membrane protein, UPF0118 [Zunongwangia profunda SM-A87] Length = 339 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 1/124 (0%) Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 +++S LG+ ++A +GL+ Y + GVP ITAI +MIP G I +I Sbjct: 192 LVKSNALGIPLVAFVQGLIALIGYLVLGVPDPFFWFGITAIGSMIPFIGTAIGIAPTTIL 251 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G + L ++G + + D +R ++ K+ L T G++ GV+ G +GL Sbjct: 252 LFADGQNWQGVALLIYGIVVVGSTDNLIRIMVLDRLAKVHTLITLVGVIVGVQIFGFIGL 311 Query: 329 FIGP 332 GP Sbjct: 312 IFGP 315 >gi|320535789|ref|ZP_08035870.1| hypothetical protein HMPREF9554_00591 [Treponema phagedenis F0421] gi|320147337|gb|EFW38872.1| hypothetical protein HMPREF9554_00591 [Treponema phagedenis F0421] Length = 365 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 23/202 (11%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMT 219 + +S++F L+FFY DG L +L + P ++++ K V + G+ Sbjct: 170 FAVSLVFTCFTLYFFYIDG----HYLLNLFISIMPIKADASTKLLNKFNEVTTNLLKGLF 225 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISF-TAVSIYLL---IKG 273 +++ + ++ Y + V + L ++T + +P G A + F + I LL +KG Sbjct: 226 LVSFYQCIISLIIYLIFKVEGALLLAILTFFSSFLPLVGCAFVWFPIGIGICLLEGWLKG 285 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 IF L + G + F+ D LRPF + IK+ L FF ++GGV+ +G G+ +GP+ Sbjct: 286 IIF----LLVAGTLISFM-DNFLRPFFLKDRIKIHPLLIFFSMLGGVQMLGFNGIILGPM 340 Query: 334 LMALIAVIWKESIMAIKENKEK 355 + VI +I+ I + EK Sbjct: 341 I-----VILFFTIIDIAHDSEK 357 >gi|269793324|ref|YP_003318228.1| hypothetical protein Taci_1732 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100959|gb|ACZ19946.1| protein of unknown function UPF0118 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 355 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 +V+R+ +G + + +G + +W +G+P+ G+ + IP G + + + Sbjct: 206 RVMRAVIVGSVLTGLVQGGLGALGWWFSGLPNWATAGLGMFACSFIPVVGTALVWLPGAA 265 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL + G+I L WGA+ + +D +RP + + L G++GG+ G+ G Sbjct: 266 YLALTGSIKGGLILAAWGALVVSSIDHLVRPLFMSSGEEASTLLMMVGVLGGLAAWGVPG 325 Query: 328 LFIGPV 333 LF+GPV Sbjct: 326 LFMGPV 331 >gi|323495911|ref|ZP_08100979.1| permease [Vibrio sinaloensis DSM 21326] gi|323319127|gb|EGA72070.1| permease [Vibrio sinaloensis DSM 21326] Length = 361 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 8/170 (4%) Query: 193 EHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 H+ P + K+ V +V +S +G + A+ +G G WLAG P + G + Sbjct: 192 RHILPLSRSQEDKLLDEVEQVSKSAVMGSFLTALAQGFAGGLGMWLAGFPG-LFWGTMMG 250 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP G + + +IYL + G+ A L +W + +D LRPFL+ G + Sbjct: 251 FASFIPVVGTALIWIPATIYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQGSAGMN 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 L FF L+GG+ GL+GL GP++ A+ V I++E +++ Sbjct: 311 TLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQDFLSRQDQ 360 >gi|227877174|ref|ZP_03995248.1| permease [Lactobacillus crispatus JV-V01] gi|256842728|ref|ZP_05548216.1| permease [Lactobacillus crispatus 125-2-CHN] gi|256848962|ref|ZP_05554396.1| permease [Lactobacillus crispatus MV-1A-US] gi|262045695|ref|ZP_06018659.1| permease [Lactobacillus crispatus MV-3A-US] gi|293380173|ref|ZP_06626255.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|295692527|ref|YP_003601137.1| permease [Lactobacillus crispatus ST1] gi|312977748|ref|ZP_07789495.1| putative membrane protein [Lactobacillus crispatus CTV-05] gi|227863228|gb|EEJ70673.1| permease [Lactobacillus crispatus JV-V01] gi|256614148|gb|EEU19349.1| permease [Lactobacillus crispatus 125-2-CHN] gi|256714501|gb|EEU29488.1| permease [Lactobacillus crispatus MV-1A-US] gi|260573654|gb|EEX30210.1| permease [Lactobacillus crispatus MV-3A-US] gi|290923217|gb|EFE00138.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|295030633|emb|CBL50112.1| Permease [Lactobacillus crispatus ST1] gi|310895487|gb|EFQ44554.1| putative membrane protein [Lactobacillus crispatus CTV-05] Length = 395 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG + + + + K+ + + S G +A G++ Y Sbjct: 195 LFFMLKDGHQLRPYITKFAPEKWQPSFSKLLYDINYAVASYVRGQITVAFWVGVMFSLGY 254 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFI 291 L G+P VAL ++ M +IP G P++ V I ++ G++ + AIE I Sbjct: 255 ILIGLPYGVALAILAGFMNLIPYFGTPLAMIPVIVISIMTSGSMLIKVLIVF--AIEQTI 312 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L P+++G +++ + T L+G GL G+ G + A++ +I Sbjct: 313 ESRILSPWVMGNKMEMHPITTILLLIGASAVWGLWGVVFGIPIYAILKII 362 >gi|260775444|ref|ZP_05884341.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] gi|260608625|gb|EEX34790.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] Length = 361 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 8/170 (4%) Query: 193 EHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 H+ P + K+ V +V +S +G + AI +GL G WLAG P + G + Sbjct: 192 RHILPLSRSQEDKLLDEVEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMG 250 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP G + + + YL + G+ A L +W + +D LRP L+ G + Sbjct: 251 FASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLTIWSVAVVGSIDNLLRPLLMQGSAGMN 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 L FF L+GG+ GL+GL GP++ A+ V I++E + +++ Sbjct: 311 TLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQDFLDEQDQ 360 >gi|296108736|ref|YP_003615685.1| protein of unknown function UPF0118 [Methanocaldococcus infernus ME] gi|295433550|gb|ADG12721.1| protein of unknown function UPF0118 [Methanocaldococcus infernus ME] Length = 326 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 D L +I ++ ++F +DG I + + + + + + + ++ +S F+ + Sbjct: 138 DLALKLIMVVFCTYYFLKDGEKIKDVILKITPTEYEYKVEILLKYLHEIYKSLFISCLFL 197 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL----IKGNIF 276 ++ G + Y+L +P L V+TAI A +P GA I + S+Y+ IKG F Sbjct: 198 SVIIGFLAFIIYYLFSIPYPELLAVLTAIFAFLPIIGAWIIYLPASLYIALANPIKGLFF 257 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 C+ I D LRP +V I P L L+ + T+GL G IGP+++ Sbjct: 258 LILCIVFLNIIP----DYILRPHIVSTDIH-PILVVIAFLIAPL-TLGLAGFAIGPLIV 310 >gi|73542584|ref|YP_297104.1| hypothetical protein Reut_A2900 [Ralstonia eutropha JMP134] gi|72119997|gb|AAZ62260.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 379 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 71/314 (22%), Positives = 139/314 (44%), Gaps = 15/314 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF V+ ALI+ T +P+ + S +A + + + + +VP +L + E Sbjct: 39 FFDLVVWALILAVTIYPLQVRLRGRLGLSEGHIATLIVLLSIAIILVPA-YLLGVAVFES 97 Query: 90 KELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E VV + IP P ++ P G W + + L + LK + Sbjct: 98 VERAIDVVKDGRLSIPQPAESVASWPLVGQQLYAFWQQAATDLSGLLMKVAPQLKGFSVG 157 Query: 148 FIPRFAS-RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + A G++ + L I +I+A + G ++++ S + P +I + Sbjct: 158 LLAKLAGLGTGLLVFVFALIIAGIIMA---YGEMGSRSAERIAS--RIVGPDRGLRIVEL 212 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 IR+ G+ IA + +++G A+ + +P L + ++ ++ A + V Sbjct: 213 CTATIRAVAQGVVGIAFIQMMLIGVAFIVKDIPGAGLLALAVLLLGIMQLPATLITVPVI 272 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +Y+ AT +F +I +F+ D L+P L+G + +P G +GG+ + Sbjct: 273 VYVFATEGTTFATIVF---SIYVFVAGLADNVLKPLLLGRGVDVPMPVVLIGALGGMVSG 329 Query: 324 GLLGLFIGPVLMAL 337 G++GLFIGPV++A+ Sbjct: 330 GIIGLFIGPVMLAV 343 >gi|237803518|ref|ZP_04591103.1| lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025500|gb|EGI05556.1| lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 7/176 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ ++ M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMSLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G +WT + + Sbjct: 79 GFNLADHVRDATGLIKNIQVDGLPDPPQWLAGIPLVGERLVGIWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +L G + R A G I L+ LSIIF FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSAQIGGGI-LELTLSIIFA----FFFYRDGPRLAAFVLSLLERL 189 >gi|226946440|ref|YP_002801513.1| hypothetical protein Avin_44170 [Azotobacter vinelandii DJ] gi|226721367|gb|ACO80538.1| Conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 368 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P + + + IR+ G+ IA + L++G + L GVP L + ++ +I Sbjct: 203 PERGELLVELCTATIRTVAQGVLGIAFIQMLLVGVGFVLMGVPGAGLLALAVLLLGIIQV 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 A + V +Y+ T +F +I +VD L+P L+G + +P G Sbjct: 263 PATLITVPVIVYVFSSEGASLTTIVFAVYSILAGLVDNVLKPLLLGRGVDVPMPVVLIGA 322 Query: 317 VGGVRTMGLLGLFIGPVLMAL 337 +GG+ G+LGLFIGP+++A+ Sbjct: 323 LGGMVASGILGLFIGPIVLAV 343 >gi|283851774|ref|ZP_06369052.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283572894|gb|EFC20876.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 367 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 9/198 (4%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGM 218 + L + +++ LF+ +G ++++L P + I+ + V RS LG Sbjct: 159 NIGLQLFVLVMFLFYLLAEGEFLTERL----RRASPLRRDQEDAIIARFKAVSRSVLLGG 214 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 ++ GLV G W+AG+ + G + I ++IP G + IYL+ G+ Sbjct: 215 LGTSLAIGLVTGVGLWIAGITPFL-WGAVAVIASLIPVVGLSLILIPSIIYLVATGSWKM 273 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A L L+ + + VD +RP + G ++ + F ++GG+ G LGL GP+ +++ Sbjct: 274 AIFLALYWLLVINSVDNVVRPLFMRGQARMSLVWVFVSILGGILLFGPLGLLYGPLALSI 333 Query: 338 IAVIWKESIMAIKENKEK 355 + + + A E +++ Sbjct: 334 SFLFFDIFLEAQGETEDR 351 >gi|126650494|ref|ZP_01722717.1| hypothetical protein BB14905_07888 [Bacillus sp. B14905] gi|126592650|gb|EAZ86649.1| hypothetical protein BB14905_07888 [Bacillus sp. B14905] Length = 322 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 43/267 (16%) Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF-------LKT 143 +++++++L ++ P ++S + S++W L +++ +E F L+ Sbjct: 53 QIMTQIILLSKQA---PYYISKL------SDMW---LHMQENISKYTEDFPPEVSTSLQK 100 Query: 144 NGIDFIPRFASRFGMIFLDYC-------------LSIIFMIIALFFFYRDGFSISQQLDS 190 +DFI + F + F +Y +S++ +IALF F D + + Sbjct: 101 TTMDFIKKIEETF-LSFFNYSKVSAFFSEIPSLFISLLVYMIALFLFMLD---LPKLKRI 156 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH-VALGV 246 ++L P KKI I+ ++ +TF G + ++G + + P + + + + Sbjct: 157 TYKYLKPNTAKKIKIILNRLKDATF-GYMKAHLFVSFIIGGVTLIGLLLIQPKYAITMTI 215 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I ++ ++P G+ I +Y L+ GN A LF+ AI L I+ + + P L+G I Sbjct: 216 IIWLIDIVPFLGSIIILAPWGLYHLLMGNTAIAVKLFILAAI-LLIIRRVVEPKLMGEHI 274 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L LPT + G++ G++GL +GP Sbjct: 275 GLSTLPTLIAMFIGLQLFGIIGLLVGP 301 >gi|209695373|ref|YP_002263302.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009325|emb|CAQ79591.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 353 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 23/215 (10%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A G F+ + +S I I +F D + + + L + + ++ + Sbjct: 154 LASLAGSLGGGFIQFIISTI--IAGVFMANAD--KCERAFIVIADRLTGEHGEALTTLSK 209 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS---HVALGVITAIMAMIPGGA--PISFT 263 K +RS G+ +A+ + ++ G AGVP+ + L ++ AI+ + P A P+ F Sbjct: 210 KTVRSVVQGVIGVAVIQSMMAGLGMAFAGVPAIGLWMLLVMLVAIIQLPPILALLPVIFY 269 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S+ IF C+ + G+ D L+P L+ +P L G +GG+ Sbjct: 270 VFSVDTTTTAVIFLIWCIIVSGS------DAILKPMLLSRGSNIPMLVILLGALGGMAMS 323 Query: 324 GLLGLFIGPVLMAL---IAVIWKESIMAIKENKEK 355 G++GLF+G V+++L + +W +S E+KE+ Sbjct: 324 GIVGLFVGAVVLSLTYQLFTVWLDS-----ESKEE 353 >gi|325280258|ref|YP_004252800.1| hypothetical protein Odosp_1595 [Odoribacter splanchnicus DSM 20712] gi|324312067|gb|ADY32620.1| protein of unknown function UPF0118 [Odoribacter splanchnicus DSM 20712] Length = 349 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 63/320 (19%), Positives = 142/320 (44%), Gaps = 37/320 (11%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 I KK + +A + + + +F++P+ + + L+SK+ N P+ L Sbjct: 51 LIEKKHMKKSLMATLMLIETILIFLIPISLVVWL-------LISKLQAINLD----PKSL 99 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLS 166 + G H+S K + K N I + + G I + ++ ++ Sbjct: 100 MEPIG----------HVSKLVQEKTGYDVLSKGN-IGALLSVLPKVGQILMGSISNFIIN 148 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAI 223 ++ +I+ L+F G ++++ + P + ++ + V++S +G+ ++AI Sbjct: 149 VLVLILVLYFMLVGG----RKMEDYIIDILPFNQRNKRDVLHEFHMVVKSNAIGVPLLAI 204 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLF 282 +G + Y++ G P + GV++ +IP G I + +++Y+ G+ + A L Sbjct: 205 IQGGIAMLGYYIFGAPEVILWGVVSCFATVIPVIGVAIVWIPLALYIGATGHWWTALGLS 264 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA---LIA 339 ++ + + VD +R L L T FG+V G+ G +G+ GP+L++ L Sbjct: 265 VYCIVIVANVDNLIRSVLQRKMADTHPLITIFGVVIGLSLFGFMGIIFGPLLLSIFVLCV 324 Query: 340 VIWKESIMAIKENKEKISSN 359 I+K + + +++++ Sbjct: 325 QIFKAEYLEEPQGQKRLTGR 344 >gi|288941027|ref|YP_003443267.1| hypothetical protein Alvin_1296 [Allochromatium vinosum DSM 180] gi|288896399|gb|ADC62235.1| protein of unknown function UPF0118 [Allochromatium vinosum DSM 180] Length = 355 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 75/138 (54%), Gaps = 3/138 (2%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-P 259 ++++R+ ++RS G+ +A+ + ++ G + + G+P+ ++ +++ + G P Sbjct: 202 EELARLAETIVRSVTKGILGVALIQAILAGIGFMVMGIPAAGLWALLCLLLSTVQIGIFP 261 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I+ + IY+ + A +W I + +D L+P ++G +++P F G +GG Sbjct: 262 ITLP-ILIYVFATADTVPAVLFLVWSLI-VGSLDNVLKPLVLGRGVQVPMAVIFVGAIGG 319 Query: 320 VRTMGLLGLFIGPVLMAL 337 + G++GLF+G V++ L Sbjct: 320 FISSGIIGLFVGAVVLTL 337 >gi|18977478|ref|NP_578835.1| hypothetical protein PF1106 [Pyrococcus furiosus DSM 3638] gi|18893179|gb|AAL81230.1| hypothetical protein PF1106 [Pyrococcus furiosus DSM 3638] Length = 326 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Query: 235 LAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IV 292 ++ +P+ + G++T + + IP + + A SIYLL G+ A L +GA + + Sbjct: 205 VSSLPTAILAGIVTILFSFIPLFEGWMVWLAGSIYLLNSGHFIRAILLAAYGAALVSPLP 264 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D T+RP +V K G++GGV MGL GL IGP+++ + + +E Sbjct: 265 DFTIRPKIVAKEAKFDETLVLIGMIGGVWAMGLKGLIIGPIVLNVAVEMLRE 316 >gi|170695146|ref|ZP_02886294.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170139998|gb|EDT08178.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 367 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 71/141 (50%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P +I+ + IR+ G+ IA + L++G A+ + G+P L + ++ ++ Sbjct: 203 PENGPQIAELCTSTIRAVAQGVVGIAFIQMLLIGVAFVVMGIPGAGLLALAVLLLGIMQL 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 A + V I+++ + T +F + D L+P L+G + +P G Sbjct: 263 PATLITIPVIIFVIATQGVSAITIVFSVYVFVAGLADNVLKPLLLGRGVAVPMPVVLIGA 322 Query: 317 VGGVRTMGLLGLFIGPVLMAL 337 +GG+ T G++GLFIGPV++A+ Sbjct: 323 LGGMVTGGVIGLFIGPVMLAV 343 >gi|120405597|ref|YP_955426.1| hypothetical protein Mvan_4645 [Mycobacterium vanbaalenii PYR-1] gi|119958415|gb|ABM15420.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii PYR-1] Length = 396 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 12/170 (7%) Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L+ LG+ + Y K+ +V ++ F IIA+ +G+ + ++ G+ + Sbjct: 189 RDLNPLGQQVSDIYLAKVGAMVSATVKGQF----IIAVCQGVAGAVSVYIGGIHDGFFMF 244 Query: 246 VI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI +++ IP G I + + + + GN + ++ I + +D LRPFLV Sbjct: 245 VIFLTVLSFIPLGGGIVTIPLGVGMAVFGNPVGGIFVIVFHIIVVTNIDNLLRPFLVPKS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA-------VIWKESIM 347 L + G++ G +G+ +GPVLM +I V++K++ M Sbjct: 305 AHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYLVVYKDAPM 354 >gi|261250291|ref|ZP_05942867.1| predicted permease [Vibrio orientalis CIP 102891] gi|260939407|gb|EEX95393.1| predicted permease [Vibrio orientalis CIP 102891] Length = 363 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 84/354 (23%), Positives = 154/354 (43%), Gaps = 51/354 (14%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ + ++++ + + + +VPLLF+F Sbjct: 32 YINSIVMAFIISLLMFPIHEWLEKRLPNHHNITSLLSCIVLTFIVVVPLLFVF------- 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 + V + V +W+++ GG+ A HP +K LS T+L + I+ Sbjct: 85 ---AAIVQQGSNFSQNVYQWVTN--GGIQAI------FEHPWVVKGLSLINTYLPFDTIE 133 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + +FA+ FG + + + M+ LFF RD ++ S Sbjct: 134 PQEVAQKVAQFATSFGSNLVGISAKILGDATSFLMDFFLMLFVLFFLLRD----HDKIIS 189 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + K+ + +V +S +G + AI +G+ G WLAG P + G + Sbjct: 190 AMRHILPLSRSQEDKLLDEIEQVSKSAVMGSFLTAIAQGVAGGLGMWLAGFPG-LFWGTM 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV--GGP 304 + IP G + + +IYL + G+ A L +W + +D LRP L+ G Sbjct: 249 MGFASFIPVVGTALIWIPAAIYLYVTGDTTWAIFLTVWSVAIVGSIDNLLRPLLMQGSGN 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG+ GL+GL GP++ A+ V I++E + +++ Sbjct: 309 AGMSTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQGFLDQQDR 362 >gi|317129332|ref|YP_004095614.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315474280|gb|ADU30883.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 353 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 75/324 (23%), Positives = 142/324 (43%), Gaps = 20/324 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LYF+ P++ ALI PI + I + + S + I +S + + + + FL Sbjct: 24 LYFVLPVSVPIIVALITALFLAPIVNVLIRRAKLSRSLAVFIVFISFVLVISLIVYFLLT 83 Query: 84 YGMLEMKELVSKV-VLANQHGIPVPRWLSDIPG--GMWASELWTKHLSHPQSLKILSETF 140 + ++ + + N+ +L++I G ++ +L + + L ET Sbjct: 84 RAITQLNSFIENLPYTINEIAYAWTTFLNNIESQFGQYSPDL--RQEIDDVVMGFLIETR 141 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD-----GFSISQQLDSLGEHL 195 + ID + S I Y +S++ +IAL+ F D ++S D E + Sbjct: 142 MNLQEIDLVGHVTSILIKI-PSYIVSLLVYLIALYLFLMDLPRLKEKAMSYMTDKTAEKV 200 Query: 196 -FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F A ++S +V ++ FL II + V W+ + + ++ ++ I Sbjct: 201 TFMA--SRLSYVVFGFFKAQFLVSIIIFV----VTLIGLWIIAPEVAIIMSIVIWVIDFI 254 Query: 255 PGGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P I+ A ++Y +I GN A L + AI L + +T+ P ++G I L L T Sbjct: 255 PIIGSIAVLAPWALYHIIAGNTALAVQLLVLAAI-LLTIRRTVEPKVMGHHIGLSPLATL 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 L G++ +G+LG +GP+++ L Sbjct: 314 ISLFIGLQLLGVLGFILGPLVVIL 337 >gi|325475471|gb|EGC78652.1| membrane protein [Treponema denticola F0402] Length = 372 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 23/184 (12%) Query: 190 SLGEHLFPAYWKKISRIVPKVIRST---FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 SL +H P + ++ K+ T F G+ +++ + L Y + GV S + L + Sbjct: 195 SLLKHAIPIDNETSDKLFSKIGEITTNLFKGLFLVSFYQCLASFIVYLIFGVQSALLLAI 254 Query: 247 ITAIMAMIP----------GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +T +P G + FT L KG IF L + G+I F+ D L Sbjct: 255 LTFFSTFLPLVGCGLIWFPVGVGLCFTDG----LAKGLIF----LVVAGSIISFM-DNFL 305 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 RPF + IK+ L FF ++GGV G+ +GP+++ L I + + I+E KE Sbjct: 306 RPFFLKDRIKIHPLLIFFSMLGGVSMFSFDGIILGPMIVILFFTILDMA-LDIEEKKEND 364 Query: 357 SSNF 360 NF Sbjct: 365 EDNF 368 >gi|119503128|ref|ZP_01625212.1| hypothetical protein MGP2080_10708 [marine gamma proteobacterium HTCC2080] gi|119460774|gb|EAW41865.1| hypothetical protein MGP2080_10708 [marine gamma proteobacterium HTCC2080] Length = 402 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 6/131 (4%) Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 RS G+ +A+ + L+LG + A VP+ L V+ I +I A + V I+L Sbjct: 248 RSVATGVIGVAVIQSLLLGIGFLWAEVPAAGVLAVLALITGIIQLPALLITLPVLIWLWT 307 Query: 272 KGNIFNATCLFLWGAIELFIV-----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 G A+ + I ++++ D L+P L+G + +P G +GG+ MGL+ Sbjct: 308 SGGAGEASAVMDV-VITIYLIIAGLADNVLKPILLGRGVDVPMPVVLIGALGGMVGMGLI 366 Query: 327 GLFIGPVLMAL 337 GLFIG V++A+ Sbjct: 367 GLFIGSVVLAI 377 >gi|254227295|ref|ZP_04920727.1| hipothetical membrane protein [Vibrio sp. Ex25] gi|262396438|ref|YP_003288291.1| hypothetical protein VEA_001141 [Vibrio sp. Ex25] gi|151939907|gb|EDN58733.1| hipothetical membrane protein [Vibrio sp. Ex25] gi|262340032|gb|ACY53826.1| putative membrane protein [Vibrio sp. Ex25] Length = 382 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 74/144 (51%), Gaps = 5/144 (3%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K + ++ I+S LG+ +A + L++G+ +++ GVP+ L +I I+ + A + Sbjct: 208 KSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTLILMILCIAQLPALL 267 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V ++ + + AT +W + + + +P L+G + +P G +GG+ Sbjct: 268 AVLPVIGFMYMTQDTTTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGGM 326 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 G++GLF+G V++A IW E Sbjct: 327 LFYGIVGLFLGAVILA----IWYE 346 >gi|261251647|ref|ZP_05944221.1| putative membrane protein [Vibrio orientalis CIP 102891] gi|260938520|gb|EEX94508.1| putative membrane protein [Vibrio orientalis CIP 102891] Length = 374 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+S L ++ + + + ++ I+S LG+ +A + L++G+ +++ G+P Sbjct: 190 SLSAGLTTIAVRVAGDNAQSWASMIAATIKSVLLGVIGVAAIQSLLIGAGFFVFGIPGAG 249 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L +I I+ + A + + Y+ + + AT +W + + + +P L+G Sbjct: 250 ILTLILMILCIAQLPALLVVLPIVGYMYMTQDTTTATLFTVW-VVVAALSENIFKPMLMG 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +P G +GG+ G++GLF+G V++A IW E Sbjct: 309 RGVDIPMPVILLGAIGGMLIYGIVGLFLGAVILA----IWYE 346 >gi|153006036|ref|YP_001380361.1| hypothetical protein Anae109_3181 [Anaeromyxobacter sp. Fw109-5] gi|152029609|gb|ABS27377.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 419 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 81/174 (46%), Gaps = 2/174 (1%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 ++ + M++A++F +G + + LD + L P +++ + + + A Sbjct: 216 VVNTLVMVVAVYFLLAEGHRLIEWLDEM-TPLEPGQLRELLATFNGAVGAVVVSALATAG 274 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 + + + + +AGVP ++T + A++P GA + V+ + G+ A L Sbjct: 275 VQAALAFAGFLVAGVPQPAFFAIVTFVAALVPLVGANLVVLPVAAFHFAAGHTVAAGLLA 334 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 LW + VD L+P L+ + + F L+GG+ T G G+ +GP+ +A Sbjct: 335 LWSLGVVGTVDNLLKPVLMRRGLSVHVSLVFLALLGGLSTFGAAGIIVGPLALA 388 >gi|228470697|ref|ZP_04055548.1| hypothetical protein PORUE0001_1322 [Porphyromonas uenonis 60-3] gi|228307554|gb|EEK16550.1| hypothetical protein PORUE0001_1322 [Porphyromonas uenonis 60-3] Length = 401 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 29/293 (9%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLL--FLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + +K ++ A + TV + F++P+L L + + S VL Q + + Sbjct: 64 VERKHWGRSWAASLLTVEAIFFFLIPILGIVLMLIDLFSTFDPESLNVLTTQ-AQEMIQQ 122 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + D + ELW++ + Q L +S + +K + + S F FL+ F Sbjct: 123 VED----RFGIELWSEE--NLQKLTSVSTSLVKG-----LLQGMSSF---FLN-----AF 163 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEG 226 +I+ L +F G+ +S E L P K +S +++S +G+ ++A+ +G Sbjct: 164 VILFLLYFMLRGYD---HFESAVEELLPFTGKNKRTVSSETISIVKSNAIGIPVLALVQG 220 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + Y + GV + V+T +IP G I + ++I + I G+ NA L +G Sbjct: 221 VFAYIGYLIFGVEDALLFAVLTTFTTIIPVLGTMIVWVPMAIIMGINGDWLNAILLGAYG 280 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I + VD R L + L T FG+ G+ G G+ GP++++LI Sbjct: 281 FIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFWGVIFGPLILSLI 333 >gi|166369036|ref|YP_001661309.1| hypothetical protein MAE_62950 [Microcystis aeruginosa NIES-843] gi|166091409|dbj|BAG06117.1| hypothetical protein MAE_62950 [Microcystis aeruginosa NIES-843] Length = 358 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 9/188 (4%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G+ L + SI+ AL ++ +++ ++ L E + P ++ + + Sbjct: 153 LATSTGLTVLKFIASILIAA-ALTLSAKN---LTRPMNRLAEKIAPGRGIALAGLTASTV 208 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ G+ +AI + L++G G P+ L ++T I+ ++ G + I+ + Sbjct: 209 RNVSRGIIGVAIIQSLLIGIGLVTVGTPAAGLLTLLTLILGILQIGPGLIVLGALIHAWV 268 Query: 272 KGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + N+ L LW I +VD L+P L+G + +P + G+ GGV G++GLF Sbjct: 269 --TLPNSIALLFTLW-MIPATLVDNFLKPILMGRGLPIPMVVILLGVFGGVIAYGIIGLF 325 Query: 330 IGPVLMAL 337 +GPVL+ L Sbjct: 326 VGPVLLGL 333 >gi|169829827|ref|YP_001699985.1| hypothetical protein Bsph_4404 [Lysinibacillus sphaericus C3-41] gi|168994315|gb|ACA41855.1| UPF0118 membrane protein in ctaF 3'region [Lysinibacillus sphaericus C3-41] Length = 352 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 45/268 (16%) Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF-------LKT 143 +++++++L ++ P ++S + S++W L +++ +E F L+ Sbjct: 83 QIMTQIILLSKQA---PYYISKL------SDMW---LHMQENISKYTEDFPPEVSTSLQK 130 Query: 144 NGIDFIPRFASRFGMIFLDYC-------------LSIIFMIIALFFFYRDGFSISQQLDS 190 +DFI + F + F +Y +S++ +IALF F D + + Sbjct: 131 TTMDFIKKIEETF-LSFFNYSKVSAFFSEIPRLFISLLVYMIALFLFMLD---LPKLKRI 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV----PSH-VALG 245 ++L P KKI I+ ++ +T LG + ++G L G+ P + + + Sbjct: 187 TYKYLKPNTAKKIKIILNRLKDAT-LGYMKAHLFVSFIIGGVT-LVGLLLIQPKYAITMT 244 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I ++ ++P G+ I Y L+ GN A LF+ AI L I+ + + P L+G Sbjct: 245 IIIWLIDIVPFLGSIIILAPWGFYHLLMGNTAIAVKLFILAAI-LLIIRRVVEPKLMGDH 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 I L LPT + G++ G++GL IGP Sbjct: 304 IGLSTLPTLIAMFIGLQLFGIIGLLIGP 331 >gi|30248120|ref|NP_840190.1| hypothetical protein NE0089 [Nitrosomonas europaea ATCC 19718] gi|30180005|emb|CAD84000.1| Domain of unknown function DUF20 [Nitrosomonas europaea ATCC 19718] Length = 352 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 32/340 (9%) Query: 7 NPQGIMRWMIMFIILVS--LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +P + W + I +VS +Y L P L A +I + P+ + ++ ++ T + Sbjct: 6 SPDSRLFWYLTVIGVVSALIYLLSPILTPFLLAAVIAYICNPLVT-WLEARKIPRTLSTI 64 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----VLANQHGIPVPRWLSDIPGGMWAS 120 + M +FI L LF E+ LV ++ L IP WL D + Sbjct: 65 FVMLMTMGIFIAMALILFPLFEKEVSRLVERIPSFLDLVKSQFIP---WLED----NFNV 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 EL S Q +L+E + G+ +P S G+I L + ++++ + + LF+ Sbjct: 118 ELQIDIASLKQ---MLTEHWKSAGGVAAQMLPSLKSG-GLILLTFLMNLVLVPVVLFYLL 173 Query: 179 RDGFSISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 RD ++ +Q +GE L P W+K ++R V+ G T + + + W Sbjct: 174 RDWNNLIRQ---VGE-LIPPVWQKQIFTLARETDDVLAEFMRGETAVITIMSIYYVTGLW 229 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW---GAIELFI 291 L + + +G+I+ I+ +P I+ A++ + I + + +W G+ +L + Sbjct: 230 LVKLEFALPIGLISGILVFVPYLGTITGLALATFAAITQFQEWSGVIAVWVVVGSGQL-L 288 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + P LVG I L + F L+ + G +G+ + Sbjct: 289 ESMLITPRLVGERIGLHPVAVIFALLAFGQLFGFIGILLA 328 >gi|322378404|ref|ZP_08052858.1| membrane protein [Helicobacter suis HS1] gi|322380085|ref|ZP_08054341.1| aminoacylase [Helicobacter suis HS5] gi|321147492|gb|EFX42136.1| aminoacylase [Helicobacter suis HS5] gi|321149160|gb|EFX43606.1| membrane protein [Helicobacter suis HS1] Length = 351 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 41/303 (13%) Query: 76 VPLLFLFYYGM-----LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 +PL FL Y M L ++ L N+ + ++ D P S+ K LS+ Sbjct: 69 IPLYFLIYKSMDFVFHLNLERLS---FFINKFKTDLLMYVQDFPT---LSQYAHKILSNV 122 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQL 188 + ++S +I F+S G L + + +++ LF FFY F S L Sbjct: 123 SAQALMS----------YILHFSSDIGKYSLKFASDTVMVLVFLFLCFFYGQTFY-SYIL 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL-GSAYWLAGVPSHVALGVI 247 + L + K I R V ++R L I + +G+ G W ++LGV+ Sbjct: 172 EVLPFEKIQS--KGIFREVAGILRVVLLTSIINVVLQGVAFAGLVVWFK--LDWLSLGVL 227 Query: 248 TAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGG- 303 + A+IP GGA + + V+ Y + +GNI A + L+ I + ++D ++P+L+G Sbjct: 228 YGLSALIPIVGGALV-WIPVAFYEMYRGNITGAVVIALYSLILIGGLIDSLIKPWLIGFI 286 Query: 304 -------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +K+ + FF ++ G+ G G+ +GP + A V+ + K+ Sbjct: 287 KRRVLKISLKINEILIFFSILAGISKFGFWGIAVGPTITAFFIVLLRVYEKVFTSTARKM 346 Query: 357 SSN 359 S Sbjct: 347 PSQ 349 >gi|312887141|ref|ZP_07746745.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311300453|gb|EFQ77518.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 362 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 74/143 (51%), Gaps = 2/143 (1%) Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R K+++S +G+ I ++LG A W+ G+ + + +G+I A + +IP + Sbjct: 198 RQTEKMVKSYLIGLLIQITYIIILLGGALWILGIQNALLIGIIFAFLNLIPYLGALIGNI 257 Query: 265 VSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + L + + + L + GAI F+ + L P +VG +K+ L + G++ G Sbjct: 258 LGVLLTLASSDKISDVLIVLGAITFVQFLDNNILMPRIVGSQVKINALVSIVGIIIGGVM 317 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 GL G+F+ +++++ +++ S Sbjct: 318 AGLSGMFLAMPIISILKIVFDRS 340 >gi|315230246|ref|YP_004070682.1| hypothetical protein TERMP_00482 [Thermococcus barophilus MP] gi|315183274|gb|ADT83459.1| hypothetical membrane protein [Thermococcus barophilus MP] Length = 346 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 11/127 (8%) Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKT 295 V +A G++ ++ ++P G I + + YL+ GNI ++GA+ + I D T Sbjct: 213 VSGAIAAGILCIVLELLPVIGGWILWAIGAAYLIKTGNIALGVLFAVYGAVFISPIPDIT 272 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI---WKESIMAIKEN 352 +RP LV K+ + G+ GG+ + G+ G+ IGPV + L+ + WKE + Sbjct: 273 IRPKLVAEGAKVSSVVALVGIFGGIMSFGIKGVIIGPVALGLLVTLLEEWKE------QE 326 Query: 353 KEKISSN 359 KE +S Sbjct: 327 KETLSKE 333 >gi|224026079|ref|ZP_03644445.1| hypothetical protein BACCOPRO_02832 [Bacteroides coprophilus DSM 18228] gi|224019315|gb|EEF77313.1| hypothetical protein BACCOPRO_02832 [Bacteroides coprophilus DSM 18228] Length = 334 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 8/183 (4%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGM 218 + ++I +II L+F G + Q + + P + ++ ++ +RS +G+ Sbjct: 145 SFTVNIGVLIIVLYFMLIGGKRMEQYI----YEILPFNEENKKEVLTEIHLLVRSNAIGI 200 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN 277 ++A+ +G++ Y+L PS + G +T +IP G + + ++ Y+ I G+ + Sbjct: 201 PLLAVIQGMIASLGYYLFDAPSVLLFGFLTCFATIIPIVGTALVWIPLAAYMAISGDWPH 260 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A L L+ + + +D +R L L T FG+ G+ G +G+ GP+L+++ Sbjct: 261 ALGLVLYCGLIVTNIDNLIRFILQKKLADTHPLITIFGVFIGLPLFGFMGIIFGPLLLSV 320 Query: 338 IAV 340 V Sbjct: 321 FLV 323 >gi|222479371|ref|YP_002565608.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452273|gb|ACM56538.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 345 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 9/166 (5%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLG 230 LF RDG +QL + + + P + + + +++ ++ +G +A + +LG Sbjct: 165 LFALLRDG----EQLVAWVQWVLPVDEDILDELREGLDQLMWASVVGNVAVAAIQAALLG 220 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 +AG+P+ + L V+T ++ ++P GA + ++YLL G + + ++G + Sbjct: 221 VGLAIAGLPAVIFLTVVTFVLTLLPLVGAFGVWVPAAMYLLAVGRPIASAAIAVYGLLVT 280 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F D LRP L+G G+ GG+ G +GLFIGPV++ Sbjct: 281 F-SDTYLRPALIGRTGAFNSAIIVIGIFGGLVVFGAVGLFIGPVVL 325 >gi|150009736|ref|YP_001304479.1| hypothetical protein BDI_3151 [Parabacteroides distasonis ATCC 8503] gi|255012973|ref|ZP_05285099.1| hypothetical protein B2_03653 [Bacteroides sp. 2_1_7] gi|149938160|gb|ABR44857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 337 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMT 219 + ++++ +I L+F G + L +L FP + ++ ++ ++S +G+ Sbjct: 148 FAVNVVVLIFILYFMLIGGRKMENYLYTL----FPFSDQNKDEVLNEINMIVKSNAIGIP 203 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 ++A+ +G+V Y++ P + G +T I +IP G + + ++ Y+ + G+ +A Sbjct: 204 LLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATIIPIVGTALVWVPLAAYMALNGDWVHA 263 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L ++ + + VD +R L + L T FG+V G+ G +G+ GP Sbjct: 264 LGLAIYALLVITNVDNLIRFILQKKLADIHPLITVFGVVIGLSLFGFMGIIFGP 317 >gi|51244045|ref|YP_063929.1| hypothetical protein DP0193 [Desulfotalea psychrophila LSv54] gi|50875082|emb|CAG34922.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 365 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 80/360 (22%), Positives = 146/360 (40%), Gaps = 62/360 (17%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAV 64 P I ++++F I + +FL P S L++ F I+ F+SK+ S Sbjct: 17 PMRIKYFLLVFAI--AFFFLGRILWPFWSILVLSFLLVNIFQPVYLFLSKQLPRSV---- 70 Query: 65 IATVSVMCLFIVPLLF---LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + CL I+ L+F LF+ G L + W+ D S+ Sbjct: 71 --ASGLTCLMIIALVFFPLLFFTGAL------------TGEALSFYNWVRD-------SQ 109 Query: 122 LWTKHLSHPQSLKILS--ETFLKTNGIDFIPR--------FASRFGMIFLDYCLS----- 166 +W + Q + ++ + LK GIDF P FA G+ D S Sbjct: 110 VWMRFQDFIQQSQFITRMQAPLKDFGIDFQPAQITASLAYFAKAGGLFLYDQASSWAANI 169 Query: 167 ------IIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 MI+ +FF + D + + +L L E KK I +++ + + Sbjct: 170 LQSVALFFIMILVIFFLFMDLLRLKEFLFKLSPLPEDENRLLVKKFEEIANAILKGSGIC 229 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIF 276 I I G++ + +PS + G I +++A +P G + ++ L I G Sbjct: 230 GIIQGIIGGVLFS----IMHLPSPILWGCIMSVLAFLPIFGIGLVMLPAALALAIDGQTA 285 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A+ L + + ++ ++P LVG +++ L F ++GG+ G+LG+ GP+++ Sbjct: 286 TASSLVISYLVLSLGMEYLIKPKLVGSQVEMHTLLVFLSIIGGISVYGILGIIYGPLIIT 345 >gi|154248269|ref|YP_001419227.1| hypothetical protein Xaut_4349 [Xanthobacter autotrophicus Py2] gi|154162354|gb|ABS69570.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 368 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 33/47 (70%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +++ LRP ++ + +P L F G +GG+ T G+LGLF+GPV++AL Sbjct: 297 LIEHVLRPLMLARGVDVPMLVVFIGAIGGLLTSGVLGLFVGPVVLAL 343 >gi|262382952|ref|ZP_06076089.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301307733|ref|ZP_07213690.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|262295830|gb|EEY83761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300834407|gb|EFK65020.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 337 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMT 219 + ++++ +I L+F G + L +L FP + ++ ++ ++S +G+ Sbjct: 148 FAVNVVVLIFILYFMLIGGRKMENYLYTL----FPFSDQNKDEVLNEINMIVKSNAIGIP 203 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 ++A+ +G+V Y++ P + G +T I +IP G + + ++ Y+ + G+ +A Sbjct: 204 LLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATIIPIVGTALVWVPLAAYMALNGDWVHA 263 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L ++ + + VD +R L + L T FG+V G+ G +G+ GP Sbjct: 264 LGLAIYALLVITNVDNLIRFILQKKLADIHPLITVFGVVIGLSLFGFMGIIFGP 317 >gi|295676312|ref|YP_003604836.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] gi|295436155|gb|ADG15325.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 370 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 6/144 (4%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P +I+ + IR+ G+ IA + L++G + + G+P L + ++ ++ Sbjct: 203 PGNGVQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFVVKGIPGAGLLALAVLLLGIMQL 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLPFLPTF 313 A + V ++++ + A +F A+ +F+ D L+P ++G + +P Sbjct: 263 PATLITIPVIAFVIVTDGVSTANIIF---AVYVFVAGLADNVLKPLMLGRGVAVPMPVVL 319 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ T G++GLF+GPV++A+ Sbjct: 320 IGALGGMVTGGVIGLFVGPVMLAV 343 >gi|256838584|ref|ZP_05544094.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739503|gb|EEU52827.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 337 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMT 219 + ++++ +I L+F G + L +L FP + ++ ++ ++S +G+ Sbjct: 148 FAVNVVVLIFILYFMLIGGRKMENYLYTL----FPFSDQNKDEVLNEINMIVKSNAIGIP 203 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 ++A+ +G+V Y++ P + G +T I +IP G + + ++ Y+ + G+ +A Sbjct: 204 LLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATIIPIVGTALVWVPLAAYMALNGDWVHA 263 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L ++ + + VD +R L + L T FG+V G+ G +G+ GP Sbjct: 264 LGLAIYALLVITNVDNLIRFILQKKLADIHPLITVFGVVIGLSLFGFMGIIFGP 317 >gi|149371682|ref|ZP_01891098.1| hypothetical protein SCB49_09765 [unidentified eubacterium SCB49] gi|149355309|gb|EDM43869.1| hypothetical protein SCB49_09765 [unidentified eubacterium SCB49] Length = 346 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 1/141 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 K I + + +RS LG+ ++AI +G++ + + GV VI + +MIP G Sbjct: 186 KTIGKEINSTVRSNALGIPLVAIAQGIIALIGFLIFGVEDPFFWFVIVTVGSMIPFIGTF 245 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + V I L G+ F A + +G + + D +R +++ + L T G++ G Sbjct: 246 VGILPVFILTLSSGSAFQAWGILAYGIVVVGSTDNIIRLYVLKRLDDVHPLITLIGVIVG 305 Query: 320 VRTMGLLGLFIGPVLMALIAV 340 V G +GL GP+L++L V Sbjct: 306 VPLFGFIGLVFGPLLISLFIV 326 >gi|261402505|ref|YP_003246729.1| protein of unknown function UPF0118 [Methanocaldococcus vulcanius M7] gi|261369498|gb|ACX72247.1| protein of unknown function UPF0118 [Methanocaldococcus vulcanius M7] Length = 331 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 60/306 (19%), Positives = 135/306 (44%), Gaps = 40/306 (13%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + + PIY+ + K + ++ + ++++P+ + Y +V Sbjct: 39 AYMALPIYNLLVKKLNRT------VSAALAIGIYLIPITLITIYAFSTFLNIV------- 85 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA-SRFGMI 159 LS P + ++ + L++P +I++ + T ++ + ++A S+ Sbjct: 86 ---------LSIDPNSI--NQYFLSVLNNPLLDRIITNDEMITKYVNELIKYAISQLSGK 134 Query: 160 FLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 +D + I ++ F+F RDG+ + S P +K+ RI + + ++ Sbjct: 135 IIDVGYLAIKTILVLFITFYFLRDGYKFKDVVISFT----PENYKEKMRIYLQYLHDSYK 190 Query: 217 GMTIIAIGEGLVLG----SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + I + +++ Y +AGV +IT + A++P G + + A++IY + Sbjct: 191 NLFISCVSLSIIITILSYIGYLIAGVKYAELFAIITGVFALLPILGGWMVYIAIAIYFFL 250 Query: 272 KGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLF 329 N A +F++G + L I D +RP++V + + P L L+ + ++GL G Sbjct: 251 THNYAKAIFIFIYGELFLSIAPDFVIRPYIVKKEVDIHPVLVVVAFLIAPL-SLGLSGFA 309 Query: 330 IGPVLM 335 IGP+++ Sbjct: 310 IGPLVV 315 >gi|289192288|ref|YP_003458229.1| protein of unknown function UPF0118 [Methanocaldococcus sp. FS406-22] gi|288938738|gb|ADC69493.1| protein of unknown function UPF0118 [Methanocaldococcus sp. FS406-22] Length = 334 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 10/167 (5%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS--- 231 F+F RDG ++ +L P +K+ RI + ++ + I + +++ Sbjct: 156 FYFLRDG----DKVKNLIISFVPDEYKEKMRIYLSYLHDSYKNLFISCVSLSIIITILSY 211 Query: 232 -AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + VP +IT I A++P G + + +++IY + + A +F++G + L Sbjct: 212 IGYLIVAVPYAELFAIITGIFALLPILGGWMVYISIAIYFFLMHDYTKAVFMFIYGELFL 271 Query: 290 FIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 I D +RP+LV + + + + ++GL G IGP+++ Sbjct: 272 SIAPDFVIRPYLVKKEVDIHPVLVVIAFLMAPLSLGLSGFAIGPLVV 318 >gi|319651819|ref|ZP_08005944.1| hypothetical protein HMPREF1013_02556 [Bacillus sp. 2_A_57_CT2] gi|317396471|gb|EFV77184.1| hypothetical protein HMPREF1013_02556 [Bacillus sp. 2_A_57_CT2] Length = 373 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 20/222 (9%) Query: 147 DFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 DFI F + I F + +IF ++A FF +D +L L + P+ KK Sbjct: 156 DFIQAFFEKIPNILSWFPNAATVLIFSLLATFFISKDW----HRLSGLFSRILPSRAKKS 211 Query: 204 SRIVPKVIRSTFLGM-----TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 R V ++ G T+++I ++L L V + + ++T ++ +IP G Sbjct: 212 GRTVFADLQKALFGFVKAQATLVSITTVIILAGLLILR-VDYAITIALVTGLVDIIPYLG 270 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + F IY I G + A L + I L + + + P ++ I L L T L Sbjct: 271 TGLVFVPWIIYEAIGGEMSRAIGLGILYIIVL-VQRQIMEPKILSSSIGLDPLATLIALF 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESI-----MAIKENKE 354 G + +G LGL GPV + LI + K + + IK N+E Sbjct: 330 VGFKLIGFLGLIAGPVTLVLITTLHKAGVFRDIWLFIKGNEE 371 >gi|293400449|ref|ZP_06644594.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305475|gb|EFE46719.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 363 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 66/328 (20%), Positives = 137/328 (41%), Gaps = 35/328 (10%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK-KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P+LS +++ F PI K + S L I ++++ F+ LL L Y LE+ Sbjct: 45 FLPILSGVLLAFFLQPIIDRVQQKFSLKVSVMLVYIGLLAILGAFLAVLLPLLYQQALEL 104 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +L VPRWL + G + +H +L L + +++ I I Sbjct: 105 AQL-------------VPRWLQQLEGFL------KQHHIAYDNLNTLKQNYMQEGYIIAI 145 Query: 150 PRFASRFGMIFLDYCLSII---FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 S + DY ++ I F+ I + F+ R I + + ++ +S I Sbjct: 146 DSAKSVIDTL-TDYGIAYIIAFFISIDMDFWKRTAKKIVPNVTRVA-----TFYHTLSNI 199 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 + + + T L + I + G+VL L P+ + +I A++ + P GA + + Sbjct: 200 IYQYLAGTMLDLLFIIVSVGIVLS----LYRFPNALLYAMILALLNLFPYVGATLGLILI 255 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + F+ +I+ I ++P + + + L TF + G+ Sbjct: 256 AAVAALHYDHYPWMMFFIVWSIQQ-IESNIIQPLIFNRTMNVRPLLTFVFIFISDAFFGV 314 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + P+ A+ ++++ + + +K Sbjct: 315 IGVILSPIFAAVAQIVFRSYLHSKTSDK 342 >gi|260102475|ref|ZP_05752712.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260083712|gb|EEW67832.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 399 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 14/189 (7%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII MI+ LFF +DG + + + + + ++ + + S Sbjct: 178 AVSIITMIVMTLLTAPFILFFMLKDGHQLRPYITKFAPEHWQSSFSQLLYDINYALASYI 237 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-SIYLLIKG 273 G +A G++ Y + G+P +AL ++ M +IP G P++ V I ++ G Sbjct: 238 RGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIPYFGTPLALIPVFVIAIMTSG 297 Query: 274 N-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FL IE I + L P ++G +++ + T L+G GL G+F G Sbjct: 298 SMVIKVLVVFL---IEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWGLWGVFFGI 354 Query: 333 VLMALIAVI 341 + A++ +I Sbjct: 355 PIYAILKII 363 >gi|254422637|ref|ZP_05036355.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190126|gb|EDX85090.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 365 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 21/292 (7%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +++++ + ++ + L G++ LV ++ N+ +P W+ + A + W Sbjct: 66 SLAILLVLLITVSVLGVLGVILAPPLVEQL---NELSGRLPSWIDSSTSQVTAFQNWAVS 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII---FMIIALFFFYRDGFS 183 L+ P L LS T L+T + ++ + D S++ ++ F+ G Sbjct: 123 LNLPIDLSRLS-TQLQTRITTQVQTISASILGLLPDAISSVVDLGLTVVLTFYLLLHG-- 179 Query: 184 ISQQLDSLGEHLFPAYWKKISR-IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + D L + L P W +R ++ + ++ FLG +A+ G + A+ + VP + Sbjct: 180 -ERLWDGLYQWL-PDSWNARARPLIKQNFQNYFLGQFTVAMLMGTAMTIAFVVIQVPFGL 237 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ +MA+ P G +S T +S +K + + I+ +V+ + P L+G Sbjct: 238 LFGIAVGVMAIFPFGPALSITIISFLTALKSIWLGVRVVTVAAVIDQ-VVENAIAPQLIG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G + L + L+ G + G+LGL ++AV SI +I E+++ Sbjct: 297 GFVGLNPVWILVSLLLGTKIAGVLGL--------IVAVPVASSIKSIFEDQK 340 >gi|190889747|ref|YP_001976289.1| hypothetical protein RHECIAT_CH0000115 [Rhizobium etli CIAT 652] gi|190695026|gb|ACE89111.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 385 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 15/99 (15%) Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWG---------------AIELFIVDKTLRP 298 IP G P++F + L+ G + LW AI + I+D L+P Sbjct: 251 IPAGGPLTFIVFVLCLMQLGPALVLLPVILWAWFSWPTSIALVFTVVAIPIMIIDNILKP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+ + P G++GG + GLLGLF+GPV++++ Sbjct: 311 ILMARGLSTPMPVILIGVIGGTLSQGLLGLFLGPVVLSV 349 >gi|323466958|gb|ADX70645.1| Permease [Lactobacillus helveticus H10] Length = 369 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 14/189 (7%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII MI+ LFF +DG + + + + + ++ + + S Sbjct: 148 AVSIITMIVMTLLTAPFILFFMLKDGHQLRPYITKFAPEHWQSSFSQLLYDINYALASYI 207 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-SIYLLIKG 273 G +A G++ Y + G+P +AL ++ M +IP G P++ V I ++ G Sbjct: 208 RGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIPYFGTPLALIPVFVIAIMTSG 267 Query: 274 N-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FL IE I + L P ++G +++ + T L+G GL G+F G Sbjct: 268 SMVIKVLVVFL---IEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWGLWGVFFGI 324 Query: 333 VLMALIAVI 341 + A++ +I Sbjct: 325 PIYAILKII 333 >gi|94310649|ref|YP_583859.1| hypothetical protein Rmet_1709 [Cupriavidus metallidurans CH34] gi|93354501|gb|ABF08590.1| hypothetical protein, putative membrane protein (permease) [Cupriavidus metallidurans CH34] Length = 388 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 17/177 (9%) Query: 169 FMIIALFFFY-----RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 MI +F Y R I+ ++ P +++ + +R+ G+ IA Sbjct: 176 LMIAGIFMAYGELGTRSAIQIASRISG------PERGPRLTVLCTATVRAVAQGVVGIAF 229 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 + L++G A+ + GVP L + ++ ++ A + V I+++ + +F Sbjct: 230 IQMLLIGVAFVMKGVPGAGLLALAVLLLGIMQLPATLITIPVIIFVIATEGVSGMNIVF- 288 Query: 284 WGAIELFIV---DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A+ +FI D L+P L+G + +P G +GG+ + G++GLF+GPV++A+ Sbjct: 289 --AVYVFIAGLADNVLKPMLLGRGVDVPMPVVLIGALGGMVSGGVIGLFVGPVVLAV 343 >gi|209809760|ref|YP_002265299.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011323|emb|CAQ81774.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 355 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%) Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + L + K ++ + +RS G+ +A+ + ++ G L GVP+ ++ ++A Sbjct: 194 DRLTGEHGKALTALSRTTVRSVVQGVIGVAVIQAIMAGLGMALVGVPALGLWVLLVLLVA 253 Query: 253 MIP-----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +I P+ F S+ IF CL + + D L+P L+ + Sbjct: 254 IIQLPPILALLPVIFYVFSVDTTTTAVIFLIWCLLIGSS------DAILKPILLSRGSDI 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENK 353 P + G +GG+ G++GLF+G V+++L + ++W E+ KENK Sbjct: 308 PMIVILLGALGGMAMSGIVGLFVGAVVLSLTYRLFMVWLEN--EDKENK 354 >gi|328461853|gb|EGF34075.1| putative permease [Lactobacillus helveticus MTCC 5463] Length = 350 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 14/189 (7%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII MI+ LFF +DG + + + + + ++ + + S Sbjct: 129 AVSIITMIVMTLLTAPFILFFMLKDGHQLRPYITKFAPEHWQSSFSQLLYDINYALASYI 188 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-SIYLLIKG 273 G +A G++ Y + G+P +AL ++ M +IP G P++ V I ++ G Sbjct: 189 RGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIPYFGTPLALIPVFVIAIMTSG 248 Query: 274 N-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + I +FL IE I + L P ++G +++ + T L+G GL G+F G Sbjct: 249 SMIIKVLVVFL---IEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWGLWGVFFGI 305 Query: 333 VLMALIAVI 341 + A++ +I Sbjct: 306 PIYAILKII 314 >gi|220908099|ref|YP_002483410.1| hypothetical protein Cyan7425_2702 [Cyanothece sp. PCC 7425] gi|219864710|gb|ACL45049.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 358 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 14/163 (8%) Query: 200 WKKISRIVPKVIRSTF------------LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 W+ I R+VP+ R F G +I+ GL + + +P + L ++ Sbjct: 195 WQFILRLVPQAQRDRFDRSVHRSFQGFIRGQLLISFLLGLATYIVFVIFRLPFALVLSMV 254 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+ +IPG GA + T + +L++ + A + I + D L P ++ ++ Sbjct: 255 VAVFDLIPGIGATLGVTLACLIVLLQSGWWVALQVLAICVILQQLQDNLLAPRIMQSTVR 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 L L FF L+ G + GLLG+F+ PV A+++ + E + A Sbjct: 315 LHPLVVFFALLVGTQIAGLLGVFLAVPVAGAIVSFLQIEELQA 357 >gi|161507183|ref|YP_001577137.1| putative permease [Lactobacillus helveticus DPC 4571] gi|160348172|gb|ABX26846.1| putative permease [Lactobacillus helveticus DPC 4571] Length = 399 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVI 211 +SII MI+ LFF +DG QL P +W+ ++ + + Sbjct: 178 AVSIITMIVMTLLTAPFILFFMLKDG----HQLRPYITKFAPEHWQSGFSQLLYDINYAL 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-SIYL 269 S G +A G++ Y + G+P +AL ++ M +IP G P++ V I + Sbjct: 234 ASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIPYFGTPLALIPVFVIAI 293 Query: 270 LIKGN-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + G+ + +FL IE I + L P ++G +++ + T L+G GL G+ Sbjct: 294 MTSGSMVIKVLVVFL---IEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWGLWGV 350 Query: 329 FIGPVLMALIAVI 341 F G + A++ +I Sbjct: 351 FFGIPIYAILKII 363 >gi|294651082|ref|ZP_06728419.1| membrane lipofamily protein [Acinetobacter haemolyticus ATCC 19194] gi|292823031|gb|EFF81897.1| membrane lipofamily protein [Acinetobacter haemolyticus ATCC 19194] Length = 398 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 21/251 (8%) Query: 118 WASE---LWTKHLSHPQSLKILSETFLKTN-GIDFIPRFASRF---GMIFLDYCLSIIFM 170 W SE L + Q K++ E +++TN D I FA R G+ F+ II + Sbjct: 107 WMSETFDLVPMEIDTDQISKVVME-YVQTNYSSDSIQTFALRLAQSGLNFIQIGGIIILI 165 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I F+F D + Q L L + A KI R V+ + G ++ + G++ Sbjct: 166 PIISFYFLLDWERMLQSLRRLIPRPYEASTLKIIRECHSVLGAFVKGQFLVMLLLGVIYA 225 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 L G+ + +G++ + ++IP G + A I L + + + T L L GA+ Sbjct: 226 VGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVIATLFQFGL-DWTQLLLVGAV-- 282 Query: 290 FIVDKT-----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F+V + L+PFL+G I L + F ++ G + G LG+ I + A+I V+ + Sbjct: 283 FLVGQMVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRH 342 Query: 345 SIMAIKENKEK 355 + ++N EK Sbjct: 343 A----RDNYEK 349 >gi|153833033|ref|ZP_01985700.1| transporter, PerM family [Vibrio harveyi HY01] gi|148870754|gb|EDL69660.1| transporter, PerM family [Vibrio harveyi HY01] Length = 379 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 8/139 (5%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + IR +G+ IA + G L+GVP+ +I + A++ P++ Sbjct: 209 ELHELTTATIRQVAIGIIGIAFLTAMTFGGVVALSGVPAAALFTLIALVFAIVQ--LPVT 266 Query: 262 FTA-VSIYLLIKGN---IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A V++ +L G+ I N+ L A L +D L+P ++G +++P G V Sbjct: 267 IIAIVAVAILWSGDTGTIHNSIFTVLLIAASL--IDNFLKPLILGRGLEVPMPIVLIGAV 324 Query: 318 GGVRTMGLLGLFIGPVLMA 336 GG+ + G+LG+FIG +A Sbjct: 325 GGMMSGGILGMFIGAAFLA 343 >gi|78486220|ref|YP_392145.1| hypothetical protein Tcr_1881 [Thiomicrospira crunogena XCL-2] gi|78364506|gb|ABB42471.1| Conserved hypothetical protein with DUF20 [Thiomicrospira crunogena XCL-2] Length = 367 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 80/387 (20%), Positives = 158/387 (40%), Gaps = 77/387 (19%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR +G + +++ ++ L+ F +L A+I+ ++ +Y + K ++S Sbjct: 1 MRSNAPYEEGFLIILLLTAVVGLLWLFSPFLEALLFAMILATATYSLYLKVLPKVKQSPN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + +V V I P+ +L L++ +VS+ +WLS Sbjct: 61 YASAVMSVFVFVTVIAPVTYLLLEVGLQVGHIVSQA----------EQWLSQ-------- 102 Query: 121 ELWTKHLSHPQSLKILSET------FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 P+SL L++ F ++ ++ I + + +I+F++ + Sbjct: 103 -------QTPESLSQLNQNLVEVIPFPESTQMELIRQVKDNSDKLITFAQDTIMFLVKGI 155 Query: 175 F------------------FFYRDGFSISQQLDSLG--EHLFPAYWKKISRIVPKVIRST 214 F FFYRDG IS L L E+ + + ++ + Sbjct: 156 FGNTTSFITFIFLAVFALFFFYRDGHRISHHLKILSPLENYYDTMIMTRFSNLSTILLLS 215 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKG 273 LG +A+ +G V W G+P + +G+ AI + IP GA + + ++ ++ +G Sbjct: 216 VLG---VALMQGAVFAIVAWFLGMPG-LFIGMAIAITSFIPIVGAALIWIPFALIMVAQG 271 Query: 274 N-IFNATCLFLWGAIELFIVDKTLRPFLV-------GGPIK---------LPFLPTFFGL 316 + + +F + F +D +RP L+ GG + + L TF GL Sbjct: 272 DYVAAGVVVFFGAVVNGFFIDNVVRPMLIQKISLSLGGASEELAVANHTLITVLSTFAGL 331 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G++GLF GPV+ A+ I+ Sbjct: 332 IH----FGMIGLFFGPVIAAMAITIFD 354 >gi|58336979|ref|YP_193564.1| permease [Lactobacillus acidophilus NCFM] gi|227903538|ref|ZP_04021343.1| permease [Lactobacillus acidophilus ATCC 4796] gi|58254296|gb|AAV42533.1| putative permease [Lactobacillus acidophilus NCFM] gi|227868425|gb|EEJ75846.1| permease [Lactobacillus acidophilus ATCC 4796] Length = 395 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 12/188 (6%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII MI+ LFF +DG + + + + K+ + + S Sbjct: 177 AVSIITMIVMTLLTAPFILFFMLKDGHQLRPYITKFVPETWQQSFSKLLYDINYAVASYI 236 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-SIYLLIKG 273 G +A G++ Y + G+P +AL ++ M +IP G P++ V I ++ G Sbjct: 237 RGQITVAFWVGVMFTIGYIIIGLPYGLALAILAGFMNLIPYFGTPLALIPVIVISIMTSG 296 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 ++ + AIE I + L P ++G +++ + T L+G GL G+ G Sbjct: 297 SMLVKVLIVF--AIEQTIETRILSPLVMGNKMQMHPVTTILLLIGASSVWGLWGVIFGIP 354 Query: 334 LMALIAVI 341 + A++ +I Sbjct: 355 IYAVLKII 362 >gi|269962623|ref|ZP_06176969.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832660|gb|EEZ86773.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 382 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 8/143 (5%) Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A ++ + IR +G+ IA + G+ L+GVP +I I A++ Sbjct: 205 ARGTELHELTTATIRQVAVGIIGIAFLTAMAFGAVVALSGVPGAALFTLIALIFAIVQ-- 262 Query: 258 APISFTA-VSIYLLIKGN---IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P++ A V+I LL G+ I N L A L +D L+P ++G + +P Sbjct: 263 LPVTLIALVTIGLLWSGDSGTIHNVIFTVLLIAASL--IDNFLKPLILGRGLDVPMPIVL 320 Query: 314 FGLVGGVRTMGLLGLFIGPVLMA 336 G +GG+ + G+LG+FIG +A Sbjct: 321 IGAIGGMMSGGILGMFIGAAFLA 343 >gi|251797637|ref|YP_003012368.1| hypothetical protein Pjdr2_3650 [Paenibacillus sp. JDR-2] gi|247545263|gb|ACT02282.1| protein of unknown function UPF0118 [Paenibacillus sp. JDR-2] Length = 346 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 10/131 (7%) Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI--YLL--IKGNIFNATCLFLWGAIE 288 W+ G P AL ++ ++++IP G +SF + I Y L IK I+ + L A+E Sbjct: 218 WIMGFPYLFALTIMVFLLSLIPVAGVVVSFVPIGIIGYQLGGIKTVIWVIVLVLLIHALE 277 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIM 347 + L P L LP TFF L+ MG+ GL IG P+ M ++ V+ E Sbjct: 278 TYF----LNPRLYSHKTNLPMFYTFFILILSEHYMGIWGLLIGIPIFMFMLDVLKVEQAD 333 Query: 348 AIKENKEKISS 358 +++E + + S Sbjct: 334 SLEEQAKPVKS 344 >gi|298675240|ref|YP_003726990.1| hypothetical protein Metev_1335 [Methanohalobium evestigatum Z-7303] gi|298288228|gb|ADI74194.1| protein of unknown function UPF0118 [Methanohalobium evestigatum Z-7303] Length = 356 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 68/356 (19%), Positives = 159/356 (44%), Gaps = 25/356 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + ++++Y K F V+ ++ + + +P+YS ++ K +S + I+ +S + + Sbjct: 14 LLLLVSIIAIYLTKEFVPVVVFSIFLTYVLYPVYS-YLEKVTKSERIASSISVLSALFIL 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSL 133 + + L + E+ +L++ + I + + L D I + S + ++S+ S Sbjct: 73 GLCIYLLLSSAVREISKLITSPDQIREPIIALEKELLDFISSTDYLSFIAESYISNGLSQ 132 Query: 134 KILS-----ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ- 187 +++ ++KT F+ F + + + + L+++F ++F D I Q Sbjct: 133 PVVTVINWVSPYVKT----FLTSFITNTPLYLISFVLTLLFT----YYFLIDARRIRAQI 184 Query: 188 LDSLGE---HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +D + E H+ + +++ I + F + + G++ ++L G+P V L Sbjct: 185 MDVIPEKNKHVVSLFINELNVIYYNLFNIFF----VTSFLTGVIASVGFFLLGIPYPVIL 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG 302 G+ ++ ++P GAP+ + IY LI + A + L+G L I D +RP L Sbjct: 241 GMAVFLLTLLPLVGAPVIYIPFFIYYLIIQDYATAIIILLFGIFILSIFPDSFIRPRLAK 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + T + +G G +GP++ + ++ I + E+ S Sbjct: 301 NKASIHPVITLLSFTAPIFVIGFTGFIVGPLVYGFLLAFYRTKIKIKYQTDEEPES 356 >gi|226952105|ref|ZP_03822569.1| PerM family permease [Acinetobacter sp. ATCC 27244] gi|226837161|gb|EEH69544.1| PerM family permease [Acinetobacter sp. ATCC 27244] Length = 398 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 21/251 (8%) Query: 118 WASE---LWTKHLSHPQSLKILSETFLKTN-GIDFIPRFASRF---GMIFLDYCLSIIFM 170 W SE L + Q K++ E +++TN D I FA R G+ F+ II + Sbjct: 107 WMSETFDLVPMEIDTDQISKVVME-YVQTNYSSDSIQTFALRLAQSGLNFIQIGGIIILI 165 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I F+F D + Q L L + A KI R V+ + G ++ + G++ Sbjct: 166 PIISFYFLLDWERMLQSLRRLIPRPYEASTLKIIRECHSVLGAFVKGQFLVMLLLGVIYA 225 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 L G+ + +G++ + ++IP G + A + L + + + T L L GA+ Sbjct: 226 VGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVVATLFQFGL-DWTQLLLVGAV-- 282 Query: 290 FIVDKT-----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F+V + L+PFL+G I L + F ++ G + G LG+ I + A+I V+ + Sbjct: 283 FLVGQMVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRH 342 Query: 345 SIMAIKENKEK 355 + ++N EK Sbjct: 343 A----RDNYEK 349 >gi|219853173|ref|YP_002467605.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219547432|gb|ACL17882.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 363 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D +RP L+G +++ F G GG+ MG +G +GP+LMAL+ +K +I Sbjct: 293 DVVMRPLLMGQKMQVHPAILFIGFFGGIAVMGAIGFVLGPLLMALLVAAYKIAIEEFGAG 352 Query: 353 KEKISSN 359 +E N Sbjct: 353 REGDKDN 359 >gi|312883995|ref|ZP_07743712.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309368453|gb|EFP95988.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 361 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%) Query: 193 EHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 H+ P + K+ V +V +S +G + AI +GL G +AG P+ + G + Sbjct: 192 RHILPLSRSQEDKLLDEVEQVAKSAVMGSFLTAIAQGLAGGIGMAIAGFPA-LFWGTMMG 250 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPI 305 + IP G + + S+YLL+ G +FL G +F+V D LRPFL+ G Sbjct: 251 FASFIPVIGTALIWIPASLYLLLTGE--TGLAIFLAG-FSVFVVGSIDNLLRPFLMQGNG 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV---IWKESIMAIKENKEK 355 + L FF L+GG+ GL+GL GP++ A+ V I++E + ++K Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPIIFAVTVVLFHIYEEEFQGFLDQQDK 360 >gi|262278141|ref|ZP_06055926.1| permease [Acinetobacter calcoaceticus RUH2202] gi|262258492|gb|EEY77225.1| permease [Acinetobacter calcoaceticus RUH2202] Length = 397 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 37/259 (14%) Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + A E+ T+ +S +++ +T + I + ++ G+ F+ +++ + I F Sbjct: 113 NLQAMEIDTEQMS--KAVMEYVQTNYSADSIQSVLLKLAQSGLNFIQIGGTVVLIPIIAF 170 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKI----SRIVPKVIRSTFL-----------GMTI 220 +F D + Q L L + A +I ++ ++ FL G+ + Sbjct: 171 YFLLDWDRMLQNLRRLIPRRYEANTLQIVGECHSVLGAFVKGQFLVMLLLGIVYAVGLQL 230 Query: 221 IAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 I + GL++G LA + ++ A+G+I A++A + F ++LL+ G +F Sbjct: 231 IGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVIASL-----FQFGLDWMHLLLVGVVF-- 283 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + AIE +I L+PFL+G I L + F ++ G + G LG+ I + A+I Sbjct: 284 ---MIGQAIEGYI----LQPFLLGDKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVI 336 Query: 339 AVIWKESIMAIKENKEKIS 357 V+ K +++N E+ S Sbjct: 337 VVLLKH----LRDNYERSS 351 >gi|256810121|ref|YP_003127490.1| protein of unknown function UPF0118 [Methanocaldococcus fervens AG86] gi|256793321|gb|ACV23990.1| protein of unknown function UPF0118 [Methanocaldococcus fervens AG86] Length = 333 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 10/177 (5%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + +I +I F+F ++G + S P +K+ +I + + ++ + I + Sbjct: 145 IKVIMVIFITFYFLKEGDKAENVIISFT----PNEYKEKMKIYLEYLHDSYKNLFISCVS 200 Query: 225 EGLVLGS----AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 +++ Y + GVP V+T I A++P G + + ++IY I + A Sbjct: 201 LSIIITILSYIGYLIVGVPYAELFAVVTGIFALLPILGGWMVYIPIAIYYFITHDYTKAI 260 Query: 280 CLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 LF++G + L I D +RP+LV + + + + ++GL G IGP+++ Sbjct: 261 FLFIYGELMLSIAPDFVIRPYLVKKEVDIHPVLVIVAFLMAPLSLGLSGFAIGPLVV 317 >gi|86130132|ref|ZP_01048732.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85818807|gb|EAQ39966.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 345 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K I + ++++S +G+ ++A+ +GLV + + GV I + +MIP G Sbjct: 184 KLIGKDSQELVKSNAIGIPLVALLQGLVALIGFLILGVEDPFFWFAIVTVGSMIPFVGTA 243 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + V I L G+I+ A + ++G + + D R + + L T G++ G Sbjct: 244 LGIVPVCIILYAAGDIWQAIVMIIYGTVVVGSTDNLFRLVIQKRLADVHPLITIIGVIVG 303 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 V G +GL GP+++++ +I K I + KEK S Sbjct: 304 VPLFGFIGLIFGPIVVSIFLLIVK--IYKQEYGKEKPSEQ 341 >gi|218290422|ref|ZP_03494552.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius LAA1] gi|218239550|gb|EED06744.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius LAA1] Length = 375 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 21/123 (17%) Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT---AIMAMIPGGAPISFTAVSIYLLIK 272 +GM ++ ++LG + LAG+ V ++T AI+A+I G ++ +++ ++I Sbjct: 238 IGMFVLGFPYAILLGILFGLAGLVPIVGSAILTVPWAIVALITGHVAVAIKVLALQVVIS 297 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 I+ T+ P ++ + L L T FGL G + MG +GLFIGP Sbjct: 298 ------------------IIRHTVEPKILADSVGLDTLTTLFGLYVGFKVMGFIGLFIGP 339 Query: 333 VLM 335 +L+ Sbjct: 340 ILL 342 >gi|71279220|ref|YP_271255.1| hypothetical protein CPS_4608 [Colwellia psychrerythraea 34H] gi|71144960|gb|AAZ25433.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 370 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 8/174 (4%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I+ +IIA+ F + + Q L L L + + IRS G+ +A+ + Sbjct: 175 IVSLIIAVVFMAKSA-PLHQGLSKLMRRLMNDFGDRTISTTIATIRSVATGVLGVAVIQS 233 Query: 227 LVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFL 283 L+ G +A +P A+ V+ +A +P PI ++ Y + A FL Sbjct: 234 LMSGVGLMIADIPGAGIWAIAVLILAIAQLP---PILILGPIAAYYFSVADTTPAIA-FL 289 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +I + D L+P +G + +P L G +GG+ G++GLF+G V++AL Sbjct: 290 IFSIIVSASDAFLKPLFLGRGMSIPMLVILLGAIGGMLLSGIIGLFVGAVVLAL 343 >gi|331677560|ref|ZP_08378235.1| putative permease [Escherichia coli H591] gi|331074020|gb|EGI45340.1| putative permease [Escherichia coli H591] Length = 123 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G P+ A+ I+L G+ T L +W + + +D +RP L+ LP + G Sbjct: 10 GPLPVLIPAI-IWLYWTGDTTWGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILILSG 67 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 ++GG+ G++GLFIGPVL+A+ Sbjct: 68 VIGGLIAFGMIGLFIGPVLLAV 89 >gi|116333210|ref|YP_794737.1| permease [Lactobacillus brevis ATCC 367] gi|116098557|gb|ABJ63706.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 347 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 21/222 (9%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA------LFF 176 W K+L+ S+ +T L T+GI + RF+S + L + S IF + + Sbjct: 116 WIKNLTQNASVINNGKT-LFTSGIVKLSRFSSGVETVILAFFFSFIFNLTKTQLRHFVHA 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F + FS + +GE + K I VI + + +I + +V+G WL Sbjct: 175 FTKSRFS--RLFVPMGELIL-----KFVTIFGTVIETQLMICSINTVL--MVIG--LWLV 223 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDK 294 G+PS + LG++ + +IP G IS ++I I G I A L L I LF Sbjct: 224 GMPSLLILGIMVFFLGLIPVAGVLISLIPLTIIAFISGGILRLAAVLVLVILIHLF-ESY 282 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L P L+ LP TF L+ R G GL +G L+A Sbjct: 283 FLHPRLMANATNLPIFVTFITLIVSERLFGAWGLIVGVPLVA 324 >gi|14521184|ref|NP_126659.1| hypothetical protein PAB0658 [Pyrococcus abyssi GE5] gi|5458402|emb|CAB49890.1| Predicted permease [Pyrococcus abyssi GE5] Length = 329 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 12/189 (6%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 Y L ++ + ++FF +I + L E L K+ + + +IR+ L + Sbjct: 135 KYLLQVVVYLTFVYFFLVKRKAIEELLSFRDERLVRIV-KRGNVTLQALIRAWLL----L 189 Query: 222 AIGEGLVLGS---AYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIF 276 I +G+++ A+ ++ VP+ + G++T + + +P G I + A + YL+ G+I Sbjct: 190 NIAKGILMTVGFLAFKVSNVPTAILAGILTVLFSFVPLFEGWMI-WLAGAFYLIKNGDIL 248 Query: 277 NATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L ++G + + + D T+RP LV + G++GG +GL GL IGP+++ Sbjct: 249 TGLGLAIYGFVLVSPLPDFTIRPKLVAREANFDEVLVLIGMIGGTWGLGLKGLIIGPIVL 308 Query: 336 ALIAVIWKE 344 + + +E Sbjct: 309 NVAIEMLRE 317 >gi|309389223|gb|ADO77103.1| sporulation integral membrane protein YtvI [Halanaerobium praevalens DSM 2228] Length = 353 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 15/194 (7%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGE---HLFP-AYWKKISRIVPKVIRST---FLGMTI 220 +FMI LF + F IS+ D + E ++FP A KI+ + ++ S M I Sbjct: 165 VFMI--LFIAFIGTFFISRDRDKIKEFLVNIFPLAIQPKIANVFTQLNSSAVGYIRAMLI 222 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 + G+V G L G + +GV A++ +IP G + F I +I GN A Sbjct: 223 LITISGIVAGIGVKLLGNQYALIVGVTAAVLDLIPIIGPALLFYPWIIVSIIFGNFSQAF 282 Query: 280 CLFLWGAIELFI--VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 LF+ + LF+ + ++G + L L T L G R +G +G +GP + L Sbjct: 283 SLFI---LHLFLAGIRSASEGKIMGKSLGLHPLATMIALFSGYRILGAIGFVVGPTFLVL 339 Query: 338 IAVIWKESIMAIKE 351 I I ++ IK Sbjct: 340 IKAIVDSDLIDIKN 353 >gi|291276358|ref|YP_003516130.1| acid membrane antigen A [Helicobacter mustelae 12198] gi|290963552|emb|CBG39384.1| acid membrane antigen A [Helicobacter mustelae 12198] Length = 345 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 20/163 (12%) Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 G H+F +++S ++ V+ ++ + M + + G+ L ++ + LG+ I Sbjct: 184 GHHIF----EEVSSVLKIVLLTSLVNMILQGLAFGIFLSFFHY----KHALILGICYGIA 235 Query: 252 AMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------L 300 +++P GGA + + V+ + + G+ +A + L+ I + F++D ++P L Sbjct: 236 SLVPVVGGALV-WIPVAGFEIFLGHFQHAIIISLYALIFIAFVIDNVIKPIIITFFNHKL 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P+K+ L FF + G T G G+ +GP + A +W+ Sbjct: 295 LSKPLKINELIIFFAIFAGFSTFGFWGILLGPAITAFFIALWR 337 >gi|76801133|ref|YP_326141.1| permease [Natronomonas pharaonis DSM 2160] gi|76556998|emb|CAI48572.1| homolog to predicted permease [Natronomonas pharaonis DSM 2160] Length = 331 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 14/238 (5%) Query: 130 PQSLKILSETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L + + F+ T + D + A I + IF+ + L F + + + Sbjct: 98 PDELPVEAFGFVVTIDVADLVDTTADTLQSIAISLAADAIFLALQLLMFALVLYGLLLRP 157 Query: 189 DSLGEHLF---PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGVPSH 241 +++G F P+ + I + + I T + +I ++ ++L G P Sbjct: 158 NAVGRAAFRVTPSPYHDILVALHRRIAGTLYALYVIQAATAVITFPLALIVFYLLGYPDV 217 Query: 242 VALGVITAIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF 299 L V+ A++ IP P A ++ + ++ G A + + G + + + D +RP Sbjct: 218 FVLAVLAALLQFIPIVGPGMLAAGLAGHDVLVGMPHRAVGVIILGPLFVGLLPDLLVRPR 277 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L KLP F G VGGV T+G++G+ GP+++AL+ E++ + E + + Sbjct: 278 LAASKAKLPASLYFVGFVGGVLTVGVIGIIAGPLVVALLV----EAVNLLSERNQSAA 331 >gi|15639542|ref|NP_218992.1| hypothetical protein TP0553 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025781|ref|YP_001933553.1| hypothetical protein TPASS_0553 [Treponema pallidum subsp. pallidum SS14] gi|8928462|sp|O83564|Y553_TREPA RecName: Full=UPF0118 membrane protein TP_0553 gi|3322847|gb|AAC26557.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018356|gb|ACD70974.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] gi|291059930|gb|ADD72665.1| membrane protein [Treponema pallidum subsp. pallidum str. Chicago] gi|311359268|gb|ADP94169.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue] gi|311705159|gb|ADQ01048.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue] gi|311705167|gb|ADQ01055.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue str. Gauthier] gi|313505080|gb|ADR64248.1| conserved hypothetical membrane protein [Treponema pallidum] gi|313505088|gb|ADR64255.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pallidum str. Mexico A] gi|313505096|gb|ADR64262.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pallidum] Length = 403 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 29/167 (17%) Query: 192 GEHL-------FPAYWKKISRIVPKVIRST---FLGMTIIAIGEGLVLGSAYWLAGVPSH 241 GEHL P + ++++ K +T F G+ IA + V Y + V Sbjct: 209 GEHLSCLLIAALPLRKRASAQLLEKCKEATRHLFKGLFSIAFYQTCVAFVFYGIFRVEGP 268 Query: 242 VALGVITAIMAMIP----------GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 +AL ++T + +P G I FT+ ++G +F LF+ G+ + I Sbjct: 269 MALAMLTFFASFLPLVGCACVWLPVGISIGFTSG----WMRGTLF----LFVAGS-SITI 319 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +D LRP L+ +++ L FF ++GGV+T G G+ +GP+L+ L+ Sbjct: 320 IDSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGPILVILL 366 >gi|293609875|ref|ZP_06692177.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828327|gb|EFF86690.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123103|gb|ADY82626.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 397 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 37/254 (14%) Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+ T+ LS +++ +T + I + ++ G+ F+ +++ + I F+F D Sbjct: 118 EIDTEQLS--KAVMEYVQTNYSADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKI----SRIVPKVIRSTFL-----------GMTIIAIGE 225 + Q L L + A +I ++ ++ FL G+ +I + Sbjct: 176 WERMLQNLRRLIPRPYEATTLQIVGECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEV 235 Query: 226 GLVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 GL++G LA + ++ A+G+I A++A + F ++LL+ G +F + Sbjct: 236 GLIIGMVAGLASIIPYLGFAVGIIAAVIASL-----FQFGLDWMHLLLVGIVF-----MI 285 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 A+E +I L+PFL+G I L + F ++ G + G LG+ I + A+I V+ K Sbjct: 286 GQAVEGYI----LQPFLLGDKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLK 341 Query: 344 ESIMAIKENKEKIS 357 ++EN E+ S Sbjct: 342 H----LRENYERSS 351 >gi|16080231|ref|NP_391058.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311123|ref|ZP_03592970.1| hypothetical protein Bsubs1_17271 [Bacillus subtilis subsp. subtilis str. 168] gi|221315450|ref|ZP_03597255.1| hypothetical protein BsubsN3_17187 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320366|ref|ZP_03601660.1| hypothetical protein BsubsJ_17155 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324650|ref|ZP_03605944.1| hypothetical protein BsubsS_17306 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928521|sp|O32095|YUEF_BACSU RecName: Full=UPF0118 membrane protein yueF gi|2635675|emb|CAB15168.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 369 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 64/306 (20%), Positives = 130/306 (42%), Gaps = 38/306 (12%) Query: 78 LLFLFYYGMLE-MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ----- 131 L++L + G+L + V ++ A G+ +++P + + TK LSH Q Sbjct: 73 LIYLLFIGLLAFISASVGPIITAQVTGL-----FNNLPDYIKQIQALTKDLSHSQWFTWM 127 Query: 132 ------SLKILSET---FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S+ + ++ FL+ + ++ FG++ + L II + LF+ +DG Sbjct: 128 MNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVV-TNITLVIITVPFILFYMLKDG- 185 Query: 183 SISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + L + PA ++ KI + + + + F G +I + G Y +AG+ Sbjct: 186 ---HRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGL 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK---- 294 P + LG++ AI +IP P A ++ + ++ L+ I + IV + Sbjct: 243 PYALILGIVMAITNIIPYVGPFLGAAPAVIV----GFMDSPAKALFAIIVVVIVQQLDGN 298 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK-ENK 353 L P ++G + L L+G G+LG+ + + A++ + + IK + Sbjct: 299 LLSPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIVRLIKLRQR 358 Query: 354 EKISSN 359 ++ N Sbjct: 359 SRLEEN 364 >gi|75762049|ref|ZP_00741959.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899750|ref|YP_002448161.1| sporulation integral membrane protein YtvI [Bacillus cereus G9842] gi|74490456|gb|EAO53762.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541741|gb|ACK94135.1| sporulation integral membrane protein YtvI [Bacillus cereus G9842] Length = 372 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 179 LVFILLATFFISYDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 348 VLLNTLHKANV 358 >gi|326942380|gb|AEA18276.1| hypothetical protein CT43_CH4616 [Bacillus thuringiensis serovar chinensis CT-43] Length = 372 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 179 LVFILLATFFISYDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 348 VLLNTLHKANV 358 >gi|89100377|ref|ZP_01173241.1| hypothetical protein B14911_07438 [Bacillus sp. NRRL B-14911] gi|89084896|gb|EAR64033.1| hypothetical protein B14911_07438 [Bacillus sp. NRRL B-14911] Length = 375 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM- 218 F + +IF ++A FF +D + +L LG L P K S V ++ G Sbjct: 172 FPNAATVVIFSLLATFFISKDWY----RLSILGNRLLPEKAKASSATVFTDLKKALFGFV 227 Query: 219 ----TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKG 273 T+++I +++ + V + + ++T I+ +IP G + F IY I G Sbjct: 228 KAQATLVSI-TAIIILIGLLILRVDYAITIALVTGIVDIIPYLGTGLIFVPWIIYEAIAG 286 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A L + I L + + + P ++ I + L T L G +T+G LGL GPV Sbjct: 287 EMSTAVGLGVLYVIVL-VQRQIMEPKVLSSSIGMDPLATLVALFVGFKTIGFLGLIAGPV 345 Query: 334 LMALIAVIWKESI-----MAIKENKEK 355 ++ +I + K + + IK N + Sbjct: 346 VLVIITTLHKAGVFRDLWLYIKGNDRR 372 >gi|300711171|ref|YP_003736985.1| hypothetical protein HacjB3_09050 [Halalkalicoccus jeotgali B3] gi|299124854|gb|ADJ15193.1| hypothetical protein HacjB3_09050 [Halalkalicoccus jeotgali B3] Length = 326 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 5/128 (3%) Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 + +G +A +G+ G LAGVP V + ++A++P GA + + +YLL+ Sbjct: 190 AVIVGHVFVAFVQGMAGGIGLLLAGVPDPVFWTAVMILLALLPLIGAFLVWAPAGVYLLL 249 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ + L ++G + + ++D +RP ++ +L G+ GG+ ++G F+G Sbjct: 250 IGHPYAGLFLLVYGIVVVSMIDNYVRPIIIDARARLNPGVILVGVFGGIYSLG----FVG 305 Query: 332 PVLMALIA 339 P+ + ++ Sbjct: 306 PIALGVLG 313 >gi|299769104|ref|YP_003731130.1| hypothetical protein AOLE_04300 [Acinetobacter sp. DR1] gi|298699192|gb|ADI89757.1| hypothetical protein AOLE_04300 [Acinetobacter sp. DR1] Length = 397 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 35/237 (14%) Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 +T + I + ++ G+ F+ +++ + I F+F D + Q L L + Sbjct: 133 QTNYSADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYE 192 Query: 198 AYWKKI----SRIVPKVIRSTFL-----------GMTIIAIGEGLVLGSAYWLAGVPSHV 242 A +I ++ ++ FL G+ +I + GL++G LA + ++ Sbjct: 193 ATTLQIVGECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYL 252 Query: 243 --ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 A+G+I A++A + F ++LL+ G +F + A+E +I L+PFL Sbjct: 253 GFAVGIIAAVIASL-----FQFGLDWMHLLLVGVVF-----MIGQAVEGYI----LQPFL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +G I L + F ++ G + G LG+ I + A+I V+ K ++EN E+ S Sbjct: 299 LGDKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKH----LRENYERSS 351 >gi|313681479|ref|YP_004059217.1| hypothetical protein Sulku_0350 [Sulfuricurvum kujiense DSM 16994] gi|313154339|gb|ADR33017.1| protein of unknown function UPF0118 [Sulfuricurvum kujiense DSM 16994] Length = 355 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 87/363 (23%), Positives = 156/363 (42%), Gaps = 58/363 (15%) Query: 6 LNPQGIMRWMIM--FIILVSLY--FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +RWM F++++ L+ FLK FF +L A+ + P+Y S S+ + Sbjct: 1 MQQNNFLRWMSFGIFVLILWLFSPFLKSFFVALLLAMAVS----PLYRSIKSRIDRYPAL 56 Query: 62 LAVIATVSV------MCLFIVPLLFLFYYGMLE--MKELVSKVVLANQHGIP---VP--- 107 ++V + VS + L I + +F Y +L+ K L ++ N+ P +P Sbjct: 57 VSVASLVSASIVSIGLSLIIFLPIAIFLYQILDNPAKTLDMIRMIGNKIDSPYLNLPTFL 116 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 +WLSD P L T+ +H + + + I FAS G Sbjct: 117 QWLSD-P----LYNLLTQIRNHKDEIIAFLAGWFGSG----IKTFASMLGE--------- 158 Query: 168 IFMIIALFFFY----RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + MI+ FFF R + L + + +++ I+ V+ T +G + I Sbjct: 159 MAMIVIFFFFLTWYGRRLLLFLLPIIPLPRSIKRDFLDEMT-IMSAVVFYTLVG---VMI 214 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 +GL G + + LG +T I A+IP G + + V+++ + GNI NA + Sbjct: 215 AQGLAFGIFIAFFEGYNPLLLGFLTGISAIIPVVGTALVWIPVAVHEYMSGNIVNAFIIS 274 Query: 283 LWG-AIELFIVDKTLRPFLVG--------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 L+ A+ F +D ++ ++ G ++ FF +VGG+ T G G +GP Sbjct: 275 LYSWAMMAFFIDNIVKLVILNFVNRSLSIGKRRINEFVIFFAIVGGLATFGFWGFILGPA 334 Query: 334 LMA 336 ++A Sbjct: 335 IVA 337 >gi|228903114|ref|ZP_04067250.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 4222] gi|228967694|ref|ZP_04128713.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar sotto str. T04001] gi|228791986|gb|EEM39569.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar sotto str. T04001] gi|228856523|gb|EEN01047.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 4222] Length = 365 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 341 VLLNTLHKANV 351 >gi|188527586|ref|YP_001910273.1| membrane protein [Helicobacter pylori Shi470] gi|188143826|gb|ACD48243.1| membrane protein [Helicobacter pylori Shi470] Length = 348 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G+ W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|228910420|ref|ZP_04074235.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 200] gi|228849186|gb|EEM94025.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 200] Length = 344 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 151 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTT 210 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 211 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 259 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 260 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 319 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 320 VLLNTLHKANV 330 >gi|308061898|gb|ADO03786.1| membrane protein [Helicobacter pylori Cuz20] Length = 348 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G+ W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|228941775|ref|ZP_04104322.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974700|ref|ZP_04135266.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981294|ref|ZP_04141594.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis Bt407] gi|228778494|gb|EEM26761.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis Bt407] gi|228785103|gb|EEM33116.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817987|gb|EEM64065.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 365 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 341 VLLNTLHKANV 351 >gi|218886800|ref|YP_002436121.1| hypothetical protein DvMF_1707 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757754|gb|ACL08653.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 504 Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 9/157 (5%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIG 224 + M+ L+F RDG +Q+ + + + P + R++ V RS F+G ++A+ Sbjct: 312 LLMLFILYFLLRDG----RQMMAFVKRVSPLAHAQEDRLLTALRGVARSVFMGGVLVAVF 367 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 +G++ + L G+P+ + G + AMIP G + + + YL + G + A L Sbjct: 368 QGVIGAVGFALVGLPA-LFWGFAMSFAAMIPVVGTALIWAPATAYLYLSGETWRAVFLLG 426 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 W A+ + D LR + + +P L F ++GG+ Sbjct: 427 WCAVLVSSSDGLLRAWFMKEGAGIPMLYLFLAILGGL 463 >gi|300710664|ref|YP_003736478.1| hypothetical protein HacjB3_06475 [Halalkalicoccus jeotgali B3] gi|299124347|gb|ADJ14686.1| hypothetical protein HacjB3_06475 [Halalkalicoccus jeotgali B3] Length = 335 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 1/132 (0%) Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 + LG ++AI +G + G ++ G+P+ I ++++IP G+ + + +IYL+ Sbjct: 195 AVLLGHVLVAIVQGAIAGIGLFVVGIPNATLWTFIMIVLSLIPIIGSFLVWGPAAIYLVA 254 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G L L+G I + D LRP +V K+ G++GGV +G +GLF+G Sbjct: 255 TGQTVFGVGLLLYGTIIVNATDNFLRPIVVDRHAKINPSIIIIGVIGGVYLIGFMGLFVG 314 Query: 332 PVLMALIAVIWK 343 PV++ + V+ + Sbjct: 315 PVIVGALKVVLE 326 >gi|308063643|gb|ADO05530.1| membrane protein [Helicobacter pylori Sat464] Length = 348 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLA--GVPSHVALGVITAIMAMIPG- 256 KKI V ++R L I I EG+ G+ W G P LG++ + +++P Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWP----LGILYGLASLVPAV 237 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKL 307 G + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 238 GGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKI 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 298 NEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|224418441|ref|ZP_03656447.1| membrane protein- permease [Helicobacter canadensis MIT 98-5491] gi|313141972|ref|ZP_07804165.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131003|gb|EFR48620.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 354 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 23/163 (14%) Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 QQ+ +L + ++S ++ V S+ + M + + G+++ + + L Sbjct: 191 KQQIKTL--------YDEVSAVISVVFYSSIVSMVLQGVLFGILMAFYRY-----DSILL 237 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--- 299 GV ++IP G + + V Y L GN+ NA + L+ I + + D ++PF Sbjct: 238 GVFYGFASLIPVVGGTLVWLPVVCYELYLGNVTNAIVIALYSIIIIATLADNGVKPFVIA 297 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+ P+K+ + FF ++ G+ + G G+ +GP + AL Sbjct: 298 FINRILIETPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITAL 340 >gi|30022672|ref|NP_834303.1| hypothetical protein BC4597 [Bacillus cereus ATCC 14579] gi|206969761|ref|ZP_03230715.1| sporulation integral membrane protein YtvI [Bacillus cereus AH1134] gi|218233703|ref|YP_002369392.1| sporulation integral membrane protein YtvI [Bacillus cereus B4264] gi|296505068|ref|YP_003666768.1| hypothetical protein BMB171_C4239 [Bacillus thuringiensis BMB171] gi|29898231|gb|AAP11504.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206735449|gb|EDZ52617.1| sporulation integral membrane protein YtvI [Bacillus cereus AH1134] gi|218161660|gb|ACK61652.1| sporulation integral membrane protein YtvI [Bacillus cereus B4264] gi|296326120|gb|ADH09048.1| hypothetical protein BMB171_C4239 [Bacillus thuringiensis BMB171] Length = 372 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 179 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 348 VLLNTLHKANV 358 >gi|312891170|ref|ZP_07750692.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311296337|gb|EFQ73484.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 350 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 75/344 (21%), Positives = 149/344 (43%), Gaps = 30/344 (8%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y L+G + +L A+++ P+Y + KK + +A++ + + + ++P L L Sbjct: 25 VYALRGLSSSILGAIVLFTIFRPVYLYLVEKKHWNKPLVAIMIILVSLIVIVIPFLSLSI 84 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +V+K+ P+ +WL+ I HL+ P + Sbjct: 85 L-------VVNKISSLTSANFPIQKWLAAI------DAFAGSHLNQPHFVD-------NI 124 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N I +A+ L I ++ L+F F+ +++ ++ P + Sbjct: 125 NITQKIGTYAAELFPSILGSAADIFLTLLVLYFLLYFMFTQNKEFEAGLIKYAPFREQHA 184 Query: 204 SRIVPKVIRSTF---LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 + ++ ST+ LG II+I +G++ + GV V GVI ++ +P G P Sbjct: 185 LKFADELRISTYSNVLGQGIISISQGIMFAIGLRITGVEDPVFWGVIGTFISFLPVVGVP 244 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF-LPTFFGLVG 318 I LL+ + L ++G + + +D LR F++ I L T G++ Sbjct: 245 TLAIPFGIILLLNDKTWQGVFLLIYGVLIIGYIDNFLR-FIINKRIANTHPLITVIGVII 303 Query: 319 GVRTMGLLGLFIGPVLMA---LIAVIWKESIMAIKENKEKISSN 359 G+ G+LGL GPVL++ L+ I++ + +A + E+I ++ Sbjct: 304 GIPLFGILGLVFGPVLLSYFLLLVEIYETNRLA-ADRLERIQTS 346 >gi|229147156|ref|ZP_04275514.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST24] gi|228636266|gb|EEK92738.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST24] Length = 344 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 151 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 210 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 211 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 259 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 260 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 319 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 320 VLLNTLHKANV 330 >gi|298243575|ref|ZP_06967382.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297556629|gb|EFH90493.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 381 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 10/213 (4%) Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 FL T G +F R A F FL++ + + + I + DG + Q L Sbjct: 150 RQFLLTRGEEF-TRDAIPFLRSFLEFLIDTVIVAILSIYLLIDGTRVIQWLRRNTPQAAR 208 Query: 198 AYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A + + R+V IR F +I++ GL +G + L P LG++ IMA IP Sbjct: 209 ANFLLDTLQRVVGGYIRGQFTLALLISVLVGLGMGFIFHL---PYAFLLGILAFIMAFIP 265 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 AV I + + + A + ++ I + + P +VG + L + + F Sbjct: 266 VLGTFISGAVCILIALTQSWVTALLVLVYFVFIHVIEGEVVGPRIVGKSVGLHPIVSLFA 325 Query: 316 LVGGVRTMGLLG-LFIGP---VLMALIAVIWKE 344 LV G G+ G LF P VL +I V+W E Sbjct: 326 LVAGGELFGIWGTLFASPIAGVLQTIIIVLWSE 358 >gi|229081848|ref|ZP_04214340.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-2] gi|228701436|gb|EEL53930.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-2] Length = 365 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 341 VLLNTLHKANV 351 >gi|42523616|ref|NP_968996.1| hypothetical protein Bd2150 [Bdellovibrio bacteriovorus HD100] gi|39575822|emb|CAE79989.1| putative membrane protein [Bdellovibrio bacteriovorus HD100] Length = 345 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 45/287 (15%) Query: 71 MCLFIVPLLFLFYY--------GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 MCLF++PL Y +E +++S+ + I + + LSD G Sbjct: 72 MCLFLIPLSLAIYRIVVYASQPKNIETDQILSQAHNLKNYAINMLQKLSDFTG------- 124 Query: 123 WTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF----- 175 L+ P +++ K + I++ +F + +I L + +I M + L Sbjct: 125 --TDLAGPAR-EVMENVLHKIGSGAIEYSTQFLGQLPVILLMIFVFLISMTVMLMKAPGI 181 Query: 176 --FFYRDGFSISQQLDSLGEHLFPAYWKKI-SRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F R + + L + W + S +V +I+++ +G + GEG Sbjct: 182 KEFTLRYSPLKADTTEKLIVITKKSCWLTLFSTLVIGLIQASLIGAGSLIFGEG-----D 236 Query: 233 YWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 +WL + +T ++ IP G AP+ + + + I A LF+ I Sbjct: 237 FWL--------VLTVTFFVSFIPVIGAAPVGYL-LCVLAFIGDRTGAAIGLFIVATIAGS 287 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 I D L+PF +GG + + F +VG + MGL GL IGPV+M L Sbjct: 288 I-DNILKPFFIGGDQDISPVIGFTCVVGAIIMMGLPGLLIGPVVMNL 333 >gi|157961667|ref|YP_001501701.1| hypothetical protein Spea_1843 [Shewanella pealeana ATCC 700345] gi|157846667|gb|ABV87166.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 383 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 89/357 (24%), Positives = 149/357 (41%), Gaps = 50/357 (14%) Query: 9 QGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++LV + +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQKLERALKGRRGLAATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG---IPVP-RWLSDIPG-GMWASEL 122 ++ + L I P F+ + + VS +V Q G IP P + ++DIP G + Sbjct: 79 LAGIILLIAP----FWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQRVADIPLIGDKLFDA 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRF-------ASRFGMIFLDYCLSIIFMIIALF 175 W L T L+ + F+P+ A G + II + IA Sbjct: 135 WA-----------LFATNLEKAVLHFLPQIKTGVSAAAGMLGSSLGTLVMFIISLAIAGG 183 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S S + ++ + ++ + + IRS LG+ +A + L++GSA + Sbjct: 184 FMAHAEKS-SAAVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSALFT 242 Query: 236 AGVPSHVALGVITAI-----MAMIPG---GAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +P A G+ T I +A +P PI F Y+ + AT +W I Sbjct: 243 FSIP---AAGIFTFIVFILGIAQLPPLLVVLPIIF-----YVFSTQDSTPATIFTVWVLI 294 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + D L+P L+G + +P G +GG+ G++GLF+G V++A IW E Sbjct: 295 A-GVSDSFLKPMLMGRGVDVPMPVILIGAIGGMIAAGIIGLFLGAVILA----IWYE 346 >gi|321312725|ref|YP_004205012.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|291485630|dbj|BAI86705.1| hypothetical protein BSNT_04678 [Bacillus subtilis subsp. natto BEST195] gi|320018999|gb|ADV93985.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 369 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 63/305 (20%), Positives = 128/305 (41%), Gaps = 36/305 (11%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ------ 131 L++L + G+L ++ +Q V +++P + + TK LSH Q Sbjct: 73 LIYLLFIGLLAFISASVGPIITSQ----VTGLFNNLPDYIKQIQALTKDLSHSQWFTWMM 128 Query: 132 -----SLKILSET---FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S+ + ++ FL+ + ++ FG++ + L II + LF+ +DG Sbjct: 129 NQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVV-TNITLVIITVPFILFYMLKDG-- 185 Query: 184 ISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + L + PA ++ KI + + + + F G +I + G Y +AG+P Sbjct: 186 --HRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGLP 243 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----T 295 + LG++ AI +IP P A ++ + ++ L+ I + IV + Sbjct: 244 YALILGIVMAITNIIPYVGPFLGAAPAVIV----GFMDSPAKALFAIIVVVIVQQLDGNL 299 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK-ENKE 354 L P ++G + L L+G G+LG+ + + A++ + + IK + Sbjct: 300 LSPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIVRLIKLRQRS 359 Query: 355 KISSN 359 ++ N Sbjct: 360 RLEEN 364 >gi|157164430|ref|YP_001467226.1| hypothetical protein CCC13826_0381 [Campylobacter concisus 13826] gi|112802037|gb|EAT99381.1| acid membrane antigen A [Campylobacter concisus 13826] Length = 346 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 68/318 (21%), Positives = 130/318 (40%), Gaps = 65/318 (20%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLF-----YYGMLEMKELVSKVVLANQHGI 104 +F++ + T + + T +++CLFI PLL+ Y ++ + + + Sbjct: 45 AFLALTKNRKTLSSGLTTFALLCLFIAPLLYAVVEIAKYAAGFDINNVTKTIEFIKNYDF 104 Query: 105 PVPRWLS-------DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 +P ++ + GG+ L+++ ++ +L LS F G+D Sbjct: 105 SLPESINFLEPKIKEFIGGLDIKMLFSQVAANLANLGKLSLKF----GVD---------- 150 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL------FPAYWKKISRIVPKVI 211 MII L FF+ ++ ++ L E L + ++ ++ V Sbjct: 151 ------------MIIILVFFFFCNLYGNELINYLKEALPLKKEDTESILSEVGNVMGVVF 198 Query: 212 RSTFLGMTIIAIGEGL---VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 ST M I +G ++ S Y GV + G+ + ++IP G +++ +SI Sbjct: 199 YSTIANMII----QGFLFAIITSFYGYDGVLT----GIFFSFASLIPVVGGFLAWAPISI 250 Query: 268 YLLIKGNIFNATCLFLWGAIELFI-VDKTLRP--------FLVGGPIKLPFLPTFFGLVG 318 Y GN A + L+ I + + D L+P LV P K+ L FF ++ Sbjct: 251 YEFANGNTAAAITITLYTIIVISLGADTLLKPPIIKFINSKLVKIPTKINELLIFFAMIA 310 Query: 319 GVRTMGLLGLFIGPVLMA 336 G+ T G G+ +GP ++ Sbjct: 311 GISTFGFWGVILGPAIVT 328 >gi|327190039|gb|EGE57156.1| hypothetical protein RHECNPAF_470031 [Rhizobium etli CNPAF512] Length = 400 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 33/52 (63%) Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 AI + I+D L+P L+ + P G++GG + GLLGLF+GPV++++ Sbjct: 313 AIPIMIIDNILKPILMARGLSTPMPVILIGVIGGTLSQGLLGLFLGPVVLSV 364 >gi|253827757|ref|ZP_04870642.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511163|gb|EES89822.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 324 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 23/163 (14%) Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 QQ+ +L + ++S ++ V S+ + M + + G+++ + + L Sbjct: 161 KQQIKTL--------YDEVSAVISVVFYSSIVSMVLQGVLFGILMAFYRY-----DSILL 207 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--- 299 GV ++IP G + + V Y L GN+ NA + L+ I + + D ++PF Sbjct: 208 GVFYGFASLIPVVGGTLVWLPVVCYELYLGNVTNAIVIALYSIIIIATLADNGVKPFVIA 267 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+ P+K+ + FF ++ G+ + G G+ +GP + AL Sbjct: 268 FINRILIETPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITAL 310 >gi|255323344|ref|ZP_05364478.1| acid membrane antigen A [Campylobacter showae RM3277] gi|255299636|gb|EET78919.1| acid membrane antigen A [Campylobacter showae RM3277] Length = 346 Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 142/325 (43%), Gaps = 29/325 (8%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y K F + A ++ + + F+ + T A + T+++ LFI PLL Sbjct: 19 VYLFKPFLLNIFIAALLAVATSNVNVKFLQLTKGKRTLSAALTTLALFSLFIAPLL---- 74 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 Y ++E+ + AN + + L+ G + K L P+ +++++ +K Sbjct: 75 YAVIEIAKHA-----ANFNTGYITNTLNYFQSGNFQLPEPIKFL-EPKIKEMIADIDVKA 128 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYW 200 + I A G +++ + +IF+++ FF G + L S + E Sbjct: 129 ISANLIANLAG-IGKSSVNFLVDMIFILVFFFFAVLYGSELVGYLKSALPMKESESEFIL 187 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ ++ V+ S + I AI +G + G + +G++ A +++P G Sbjct: 188 SEVANVMSVVLYS----IVINAILQGCLFAIITISYGYNGFL-MGILFAFTSLVPVVGGL 242 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF--------LVGGPIKLPFL 310 +++ +S+Y GN A + ++ I + +V D L+P LV P K+ L Sbjct: 243 LAWGPISLYEFANGNTAAAIVIAVYTIIVISVVADTFLKPIVIKFINDKLVKIPTKINEL 302 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLM 335 FF ++ G+ T G GL +GP ++ Sbjct: 303 LLFFSMIAGISTFGFWGLILGPAIV 327 >gi|228954865|ref|ZP_04116885.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960864|ref|ZP_04122497.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048303|ref|ZP_04193871.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH676] gi|229112062|ref|ZP_04241605.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-15] gi|229129880|ref|ZP_04258846.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-Cer4] gi|229152791|ref|ZP_04280974.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1550] gi|229180915|ref|ZP_04308250.1| Sporulation integral membrane protein YtvI [Bacillus cereus 172560W] gi|229192797|ref|ZP_04319755.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 10876] gi|228590636|gb|EEK48497.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 10876] gi|228602472|gb|EEK59958.1| Sporulation integral membrane protein YtvI [Bacillus cereus 172560W] gi|228630611|gb|EEK87257.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1550] gi|228653571|gb|EEL09443.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-Cer4] gi|228671385|gb|EEL26686.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-15] gi|228723028|gb|EEL74405.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH676] gi|228798760|gb|EEM45740.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804854|gb|EEM51453.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 365 Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 341 VLLNTLHKANV 351 >gi|229072098|ref|ZP_04205307.1| Sporulation integral membrane protein YtvI [Bacillus cereus F65185] gi|228711032|gb|EEL62998.1| Sporulation integral membrane protein YtvI [Bacillus cereus F65185] Length = 365 Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 341 VLLNTLHKANV 351 >gi|15645192|ref|NP_207362.1| membrane protein [Helicobacter pylori 26695] gi|8928454|sp|O25291|Y567_HELPY RecName: Full=UPF0118 membrane protein HP_0567 gi|2313674|gb|AAD07623.1| membrane protein [Helicobacter pylori 26695] Length = 348 Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N++K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNEQK 345 >gi|228923341|ref|ZP_04086629.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836295|gb|EEM81648.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 365 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K ++ Sbjct: 341 VLLNTLHKANV 351 >gi|154149249|ref|YP_001406317.1| acid membrane antigen A [Campylobacter hominis ATCC BAA-381] gi|153805258|gb|ABS52265.1| acid membrane antigen A [Campylobacter hominis ATCC BAA-381] Length = 352 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 73/329 (22%), Positives = 137/329 (41%), Gaps = 33/329 (10%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y + F + ++I ++ + + + AV+ TV + LF VP F Sbjct: 20 IYLFQSFLLAISIGVLIAVSTAGLNEKILKFTKNRQIVSAVLTTVILCVLFFVP----FI 75 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 Y + E+ + LAN + + LS I ++ + K+ P ++ L Sbjct: 76 YAIAEIAK-----SLANIDVALLDKTLSYIKNYEFSLPNFAKNF-EPDIKSFIAN--LNF 127 Query: 144 NGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFF---FYRDGFSISQQLDSLGEHLFPAY 199 GI I +AS ++ L + +II FF + RD + ++ + E+ Sbjct: 128 EGIIKQILSYASGIAKSSANFALQMFLIIIFYFFTNLYGRDILNFFKKSIPIAENELDYM 187 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GG 257 +K+ S + V ST L A+ +G + + G + ++ A ++IP GG Sbjct: 188 FKQTSNTMSVVFYSTILN----AVLQGFLFSIIAAIYGF-DMIFFAILYAFCSLIPIIGG 242 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLP 308 A + + + +Y L GN A + L+ I + I D ++P LV P + Sbjct: 243 A-LCWAPLGLYELANGNFSAAVIISLYSIIVISTIADNFIKPVIIRFINSKLVDNPANIN 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + FF ++ G+ T G G+ +GP ++ L Sbjct: 302 EILIFFAMLAGIGTFGFWGMILGPAILTL 330 >gi|33596416|ref|NP_884059.1| hypothetical protein BPP1789 [Bordetella parapertussis 12822] gi|33566185|emb|CAE37091.1| conserved hypothetical protein [Bordetella parapertussis] Length = 361 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 63/313 (20%), Positives = 133/313 (42%), Gaps = 22/313 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +L ++I+ T P++ AV+ T++ M + +VP G + Sbjct: 42 FIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLVLLVP-------GAMLT 94 Query: 90 KELVSKVVLANQHG------IPVP-RWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 L +V H IP P ++ ++P G+ E+W + +++ Q + + L Sbjct: 95 ASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQDVLKPLQPHL 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 T G + AS G+ + SI I + Y D + ++G + P Sbjct: 155 ATAGRWLLAGMASA-GLGIAVFLASI--AIAGVILVYAD--PAKRAAHAIGVRIAGPEQG 209 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ ++ ++ + Sbjct: 210 VALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLICIVQLPLFL 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +Y+ + A +W + + + D L+P ++ + +P G +GGV Sbjct: 270 LMVPMVVYVFLNNTPTVAAVFAVW-CLLVSLCDNVLKPLMLARGVDIPIPVILIGALGGV 328 Query: 321 RTMGLLGLFIGPV 333 G++GLF+G V Sbjct: 329 LAAGIVGLFLGSV 341 >gi|108562971|ref|YP_627287.1| membrane protein [Helicobacter pylori HPAG1] gi|107836744|gb|ABF84613.1| membrane protein [Helicobacter pylori HPAG1] Length = 349 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + V+IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|227893168|ref|ZP_04010973.1| permease [Lactobacillus ultunensis DSM 16047] gi|227865034|gb|EEJ72455.1| permease [Lactobacillus ultunensis DSM 16047] Length = 400 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 24/194 (12%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII MI+ LFF +DG + + + A + K+ + + S Sbjct: 178 AVSIITMIVMTLLTAPFILFFMLKDGHQLRPYITKFAPENWQASFSKLLYDINYALASYI 237 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV-------SI 267 G +A G++ Y + G+P +AL ++ M +IP G P++ V S+ Sbjct: 238 RGQITVAFWVGVMFTIGYIVIGLPYGLALAILAGFMNLIPYFGTPLALIPVIVIAVMTSV 297 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +LIK +F+ IE I + L P ++G +++ + T L+G GL G Sbjct: 298 PMLIK-----VLVIFV---IEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWGLWG 349 Query: 328 LFIGPVLMALIAVI 341 + G + A++ +I Sbjct: 350 VIFGIPIYAILKII 363 >gi|127511625|ref|YP_001092822.1| hypothetical protein Shew_0691 [Shewanella loihica PV-4] gi|126636920|gb|ABO22563.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 377 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 23/150 (15%) Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + IRS LG+ +A + +++GSA ++ G+P A G++T ++A+ G A Sbjct: 211 TSLTAATIRSVLLGVVGVAFIQAMLIGSALFVFGLP---AAGLLT-LVALFLGIA--QLP 264 Query: 264 AVSIYLLIKGNIFN------ATCLFLW---GAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 A+ I L + G ++ AT +W G I D L+P L+G + +P Sbjct: 265 ALIIVLPLIGYAYSSMEGTSATIFSVWIFLGGIS----DNILKPMLMGRGVDVPMPVILI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G +GG+ G++GLF+G V++A IW E Sbjct: 321 GAIGGMLFAGIIGLFLGAVVLA----IWYE 346 >gi|166366520|ref|YP_001658793.1| hypothetical protein MAE_37790 [Microcystis aeruginosa NIES-843] gi|166088893|dbj|BAG03601.1| UPF0118 membrane protein [Microcystis aeruginosa NIES-843] Length = 186 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 22/147 (14%) Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 ++FL +++ I GL+L S LGVI AI PG GA + V+I Sbjct: 49 TSFLSFSLLGIKYGLILASI-----------LGVIDAI----PGVGATLGILLVTILTFT 93 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + A F+ + + I D LRP ++G ++L + F L G R GLLG+F+ Sbjct: 94 SQGLAIAVKAFIVCVVLVQIQDNILRPKVMGNALELNPVILFLSLFIGERVAGLLGIFLS 153 Query: 332 PVLMALIAVIW-----KESIMAIKENK 353 + +IA IW ++ I A++EN+ Sbjct: 154 IPIAGMIA-IWIGSSEEKPITALEENQ 179 >gi|49187485|ref|YP_030738.1| hypothetical protein BAS4490 [Bacillus anthracis str. Sterne] gi|165869655|ref|ZP_02214313.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0488] gi|167638139|ref|ZP_02396417.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0193] gi|170705406|ref|ZP_02895870.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0389] gi|177651155|ref|ZP_02933986.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0174] gi|190569043|ref|ZP_03021943.1| sporulation integral membrane protein YtvI [Bacillus anthracis Tsiankovskii-I] gi|227817381|ref|YP_002817390.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CDC 684] gi|229603687|ref|YP_002868875.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0248] gi|254736704|ref|ZP_05194410.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Western North America USA6153] gi|254754661|ref|ZP_05206696.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Vollum] gi|254757493|ref|ZP_05209520.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Australia 94] gi|49181412|gb|AAT56788.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|164714484|gb|EDR20003.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0488] gi|167513956|gb|EDR89324.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0193] gi|170129531|gb|EDS98394.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0389] gi|172082981|gb|EDT68043.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0174] gi|190559825|gb|EDV13810.1| sporulation integral membrane protein YtvI [Bacillus anthracis Tsiankovskii-I] gi|227005027|gb|ACP14770.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CDC 684] gi|229268095|gb|ACQ49732.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0248] Length = 372 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 179 LVFVLLATFFISNDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKARV 358 >gi|218515641|ref|ZP_03512481.1| hypothetical protein Retl8_19092 [Rhizobium etli 8C-3] Length = 132 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA-----LIAV 340 AI + I+D L+P L+ + P G++GG + GLLGLF+GPV+++ L A Sbjct: 45 AIPIMIIDNILKPILMARGLSTPMPVILIGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 104 Query: 341 IWKESIMAIKENKEKIS 357 W S+ EN S Sbjct: 105 AWP-SVSTAPENSRPAS 120 >gi|157962115|ref|YP_001502149.1| hypothetical protein Spea_2294 [Shewanella pealeana ATCC 700345] gi|157847115|gb|ABV87614.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 360 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 50/368 (13%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSV 70 +++F + ++ Y +P L ++++GF P+++ + S +V + V Sbjct: 12 VLLFALAIAFYACYLLISPYLGSIVLGFIVSILFLPLHTRIQQRMPNSPNMASVFSCTLV 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++PLLF+ M M E ++ + N +G WL+D GG L+HP Sbjct: 72 TVMVLIPLLFV---AMAIMNEGIN--FMTNAYG-----WLTD--GGA------KSFLAHP 113 Query: 131 --QSLKILSETFLKTNGI---DFIPRFASRFGMI--------------FLDYCLSIIFMI 171 QS L +L + I + + + A + + D L M+ Sbjct: 114 YIQSGVALLNKWLPFDTIKIDELVQQAAGKVTQLSSSLLTASTGIAGDVADTVLDFGLML 173 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLV 228 LFFF RD Q++ H+ P + I + V +S LG + A+ +G + Sbjct: 174 FVLFFFLRD----QQKIIDNTRHIIPLSRSQQGLIFNEIGVVAKSAVLGAFLTALAQGAL 229 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 G A LAG S + G + A + IP G + + SIYL I G+ A L +WG + Sbjct: 230 GGIAMSLAGF-SGLFWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWALFLIVWGVV 288 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + +D LRP+L+ G + L FF L+GG++ GL+GL GP++ A+ V+ + + Sbjct: 289 VIGSIDNFLRPWLMQGNTGMSTLLLFFSLLGGLQLFGLIGLIYGPIIFAVTLVLARLYEI 348 Query: 348 AIKENKEK 355 K+ E+ Sbjct: 349 EFKDFIEQ 356 >gi|33602293|ref|NP_889853.1| hypothetical protein BB3318 [Bordetella bronchiseptica RB50] gi|33576732|emb|CAE33810.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 360 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 63/313 (20%), Positives = 133/313 (42%), Gaps = 22/313 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +L ++I+ T P++ AV+ T++ M + +VP G + Sbjct: 41 FIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLVLLVP-------GAMLT 93 Query: 90 KELVSKVVLANQHG------IPVP-RWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 L +V H IP P ++ ++P G+ E+W + +++ Q + + L Sbjct: 94 ASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQDVLKPLQPHL 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 T G + AS G+ + SI I + Y D + ++G + P Sbjct: 154 ATAGRWLLAGMASA-GLGIAVFLASI--AIAGVILVYAD--PAKRAAHAIGVRIAGPEQG 208 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ ++ ++ + Sbjct: 209 VALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLICIVQLPLFL 268 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +Y+ + A +W + + + D L+P ++ + +P G +GGV Sbjct: 269 LMVPMVVYVFLNNTPTVAAVFAVW-CLLVSLCDNVLKPLMLARGVDIPIPVILIGALGGV 327 Query: 321 RTMGLLGLFIGPV 333 G++GLF+G V Sbjct: 328 LAAGIVGLFLGSV 340 >gi|227822502|ref|YP_002826474.1| hypothetical protein NGR_c19580 [Sinorhizobium fredii NGR234] gi|227341503|gb|ACP25721.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 370 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIM 347 ++D L+P LV +K P L G++GG + GL+GLF+GP+++ + + V W S+ Sbjct: 302 LIDNVLKPVLVARGLKTPMLVILAGVIGGTLSYGLIGLFLGPIVLGVFYDLVVAWMRSVP 361 Query: 348 AIKENKE 354 ++ + Sbjct: 362 RPEDETK 368 >gi|109947348|ref|YP_664576.1| hypothetical protein Hac_0787 [Helicobacter acinonychis str. Sheeba] gi|109714569|emb|CAJ99577.1| amaA [Helicobacter acinonychis str. Sheeba] Length = 348 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 KKI V ++R L I I EG+ G G LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWF-LGILYGLASLVPAVGGA 240 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV--------GGPIKLPFL 310 + + ++IY L G++ A + L+ + + ++D L+PFL+ +K+ + Sbjct: 241 LIWIPIAIYELYHGHVNGAIFIVLYSILLIGGLIDSVLKPFLIVVVKKRIFKTTLKINEM 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--ESIMAIKENK 353 FF ++ G+ G G+ +GP + A + + E+ KE K Sbjct: 301 LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|229175304|ref|ZP_04302819.1| Sporulation integral membrane protein YtvI [Bacillus cereus MM3] gi|228608136|gb|EEK65443.1| Sporulation integral membrane protein YtvI [Bacillus cereus MM3] Length = 365 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV++ Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVIL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|308184350|ref|YP_003928483.1| hypothetical protein HPSJM_02870 [Helicobacter pylori SJM180] gi|308060270|gb|ADO02166.1| hypothetical protein HPSJM_02870 [Helicobacter pylori SJM180] Length = 348 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 15/166 (9%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--ESIMAIKENK 353 + FF ++ G+ G G+ +GP + A + + E+ KE K Sbjct: 300 ILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|301057257|ref|ZP_07198383.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300448622|gb|EFK12261.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 358 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 5/129 (3%) Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +RS G+ +A+ + ++ G GVP ++ I+A+I I + +Y Sbjct: 218 VRSVARGILGVAMIQSILAGLGCLAVGVPGAGLWALLVLILAVIQLPTFIILAPIVVYAF 277 Query: 271 IKGNIFNATCLFLWGAIELFI--VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 A +W LF+ D L+P L+G + +P L F G +GG G++GL Sbjct: 278 YTTGTVPAVLFAVW---NLFVGGCDSFLKPLLMGRGVDVPMLVVFIGAIGGFILNGIIGL 334 Query: 329 FIGPVLMAL 337 FIG ++++L Sbjct: 335 FIGAIILSL 343 >gi|304407564|ref|ZP_07389216.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304343515|gb|EFM09357.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 356 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 68/336 (20%), Positives = 141/336 (41%), Gaps = 47/336 (13%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV-----SVMCLFIVPLLF 80 FL+ AP A+II + P+ S +K + + +I TV +V+ + VP+ Sbjct: 39 FLRAVLAPFFIAMIISYVLNPVVSLLHVRKMPRTVAVLLIYTVFCGSLTVVLMNAVPMF- 97 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS-ET 139 M +++EL N+H + ++ + + L + + + + E Sbjct: 98 -----MEQLQEL-------NRHAPELTVRAQNLVENLNNNSLMPESIRSGINNSLYKMEK 145 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + DF+ + ++F I+F+I L F+ F + ++ ++ ++ ++ Sbjct: 146 KLSESVFDFVNNIGAMVNVVF------ILFIIPFLAFYILKDFEVFER--TVITYVPKSH 197 Query: 200 WKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++ R++ + + S G I+ + G++ YW+ G+P + L + AI +IP Sbjct: 198 RQQTVRLLKDIDAALGSYIRGQFIVCLIVGVLAYLGYWIIGMPYPLLLAAVVAITNVIPY 257 Query: 256 -----GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 G AP A +S+ ++I + N C L + P +VG + + Sbjct: 258 LGPFIGAAPALLMAATISVKMMILVVVVNTLCQILE--------SNVVSPQVVGRTLHMH 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWK 343 L L+ G G++G+ + P+ AL V+ Sbjct: 310 PLSIILALLVGGELAGIVGMILAVPIFAALKVVVQH 345 >gi|33593185|ref|NP_880829.1| hypothetical protein BP2180 [Bordetella pertussis Tohama I] gi|33563560|emb|CAE42458.1| conserved hypothetical protein [Bordetella pertussis Tohama I] Length = 361 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 63/313 (20%), Positives = 133/313 (42%), Gaps = 22/313 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +L ++I+ T P++ AV+ T++ M + +VP G + Sbjct: 42 FIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLVLLVP-------GAMLT 94 Query: 90 KELVSKVVLANQHG------IPVP-RWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 L +V H IP P ++ ++P G+ E+W + +++ Q + + L Sbjct: 95 ASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQDVLKPLQPHL 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYW 200 T G + AS G+ + SI I + Y D + ++G + P Sbjct: 155 ATAGRWLLAGMASA-GLGIAVFLASI--AIAGVILVYAD--PAKRAAHAIGVRIAGPEQG 209 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ ++ ++ + Sbjct: 210 VALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLICIVQLPLFL 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +Y+ + A +W + + + D L+P ++ + +P G +GGV Sbjct: 270 LMVPMVVYVFLNNTPTVAIVFAVW-CLLVSLCDNVLKPLMLARGVDIPIPVILIGALGGV 328 Query: 321 RTMGLLGLFIGPV 333 G++GLF+G V Sbjct: 329 LAAGIVGLFLGSV 341 >gi|261408740|ref|YP_003244981.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|329930454|ref|ZP_08283994.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] gi|261285203|gb|ACX67174.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|328934832|gb|EGG31322.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] Length = 343 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 3/86 (3%) Query: 266 SIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 SIYLL G+IF L FL+ I + ++ + L P ++G + + LP + G + +G Sbjct: 257 SIYLLAVGDIFTGIGLIFLF--ILITVIRRVLEPKVIGDAVGIGALPALVSMYVGFKLVG 314 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 ++G FIGP+++ + + + K + IK Sbjct: 315 VIGFFIGPLVVIIYSAMRKAGLFQIK 340 >gi|301056100|ref|YP_003794311.1| putative transmembrane protein [Bacillus anthracis CI] gi|300378269|gb|ADK07173.1| putative transmembrane protein [Bacillus cereus biovar anthracis str. CI] Length = 372 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 179 LVFVLLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKARV 358 >gi|120435935|ref|YP_861621.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117578085|emb|CAL66554.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 347 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 151/341 (44%), Gaps = 45/341 (13%) Query: 20 ILVSLYFL-------KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I+V+ YFL KGFFAP+++A+I+ P+ S++ E + A ++ + Sbjct: 14 IIVATYFLFLGLTKAKGFFAPMITAVILSLIVLPL-----SQRMERKLKRPLAAILNSLL 68 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 LF++ + G++ +VS V + P + + P A E +H P + Sbjct: 69 LFLISI------GLMA---IVSFQVRSFAEDWPQIKETME-PKIENAKEFALEH--TPLN 116 Query: 133 LKILSETFLKTNGIDFIP-----RFASRFGMIFLDYCLSIIFMIIALFFF--YRDGFS-- 183 + + E ++ +D P F S +Y L+ ++ +FF YR F Sbjct: 117 KQDIEEAKNSSSTMDLQPGKWAKTFMSGLSSFLANYLLTFVY----IFFLLNYRHIFKNF 172 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + K + + P+ + + M ++A+ + LG ++GV + + Sbjct: 173 LLRVFPDEKQQTIKTIIVKSAEVAPQYLLGKLILMGLLAVIYSIGLG----ISGVNNFIL 228 Query: 244 LGVITAIMAMIPG-GAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + VI A++ +IP G I F AV+ L G+I + L I F+ L+P++V Sbjct: 229 VSVIAAVLTLIPYIGNVIGFVMAVAFGFLTSGDITVLIGIALTFTITQFVESYVLQPYVV 288 Query: 302 GGPIKL-PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + PF ++ G G++G+ + +MA+I V+ Sbjct: 289 GERVDVHPFF-VIVSVILGNMVWGVIGMILAIPIMAIITVV 328 >gi|17227738|ref|NP_484286.1| hypothetical protein alr0242 [Nostoc sp. PCC 7120] gi|17135220|dbj|BAB77766.1| alr0242 [Nostoc sp. PCC 7120] Length = 345 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 23/178 (12%) Query: 192 GEHLFPAYWKKISRIVPK--------VIRSTFLGMTIIAIGEGLVLGSA----YWLAGVP 239 GE L W I +IVP+ ++R +FLG + L L S+ + L VP Sbjct: 178 GEKL----WNFILKIVPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVP 233 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L VI I+ +IPG GA + +++ +L +++ A + + I D + P Sbjct: 234 FALILSVIVGILDIIPGIGATLGVGTITLIVL-SQDVWLALKVLAACVVLQQIQDNLISP 292 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++ G + L + FF L+ G R GLLG+FI + +I S+ I E K ++ Sbjct: 293 RIMQGSLNLNPVVVFFALLVGARVAGLLGVFISIPITGVIV-----SLFEIDEMKSEV 345 >gi|317009456|gb|ADU80036.1| outer membrane protein [Helicobacter pylori India7] Length = 348 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|208434487|ref|YP_002266153.1| membrane protein [Helicobacter pylori G27] gi|208432416|gb|ACI27287.1| membrane protein [Helicobacter pylori G27] Length = 348 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|317180338|dbj|BAJ58124.1| membrane protein [Helicobacter pylori F32] Length = 348 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|210134768|ref|YP_002301207.1| outer membrane protein [Helicobacter pylori P12] gi|210132736|gb|ACJ07727.1| outer membrane protein [Helicobacter pylori P12] Length = 348 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|153808650|ref|ZP_01961318.1| hypothetical protein BACCAC_02949 [Bacteroides caccae ATCC 43185] gi|149128476|gb|EDM19694.1| hypothetical protein BACCAC_02949 [Bacteroides caccae ATCC 43185] Length = 377 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 81/350 (23%), Positives = 144/350 (41%), Gaps = 36/350 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K + S ++++ + ++ + V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLKLKSRIVSILCALFLITVVGVSLFYLLVPPM 90 Query: 87 L-EMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E+ + +V L N G VP+ LS E +++ +ILSE + Sbjct: 91 ISEISRMNDLLVTYLTNGAGNNVPQNLS---------EFIHENIDLQALNRILSEENILA 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAYW 200 D +PR + L L+I+F I+A F I +++ E HL P + Sbjct: 142 AIKDTVPRMWA-----LLAESLNILFSILASFIILLYVIFILLDYEAIAEGWLHLLPNKY 196 Query: 201 KKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 197 RTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPY 256 Query: 257 GAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I F + ++K I A L ++ +++ I D L P ++G L Sbjct: 257 LQIIGFLPTVLLAILKAADTGQNFWIIIACALAVFAIVQI-IQDTFLVPKIMGKITGLNP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ NKEKI + Sbjct: 316 AIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKEKIKYD 361 >gi|229076099|ref|ZP_04209067.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-18] gi|229099057|ref|ZP_04229991.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-29] gi|229118087|ref|ZP_04247446.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-3] gi|228665310|gb|EEL20793.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-3] gi|228684285|gb|EEL38229.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-29] gi|228706962|gb|EEL59167.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-18] Length = 346 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 151 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 210 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 211 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 259 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 260 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFIGFKLFGFLGLIIGPVTL 319 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 320 VLLNTLHKAHV 330 >gi|217032380|ref|ZP_03437875.1| hypothetical protein HPB128_25g28 [Helicobacter pylori B128] gi|298736258|ref|YP_003728784.1| hypothetical protein HPB8_763 [Helicobacter pylori B8] gi|216945947|gb|EEC24563.1| hypothetical protein HPB128_25g28 [Helicobacter pylori B128] gi|298355448|emb|CBI66320.1| conserved hypothetical membrane protein [Helicobacter pylori B8] gi|317012381|gb|ADU82989.1| hypothetical protein HPLT_02815 [Helicobacter pylori Lithuania75] Length = 348 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|30264667|ref|NP_847044.1| hypothetical protein BA_4841 [Bacillus anthracis str. Ames] gi|47530136|ref|YP_021485.1| hypothetical protein GBAA_4841 [Bacillus anthracis str. 'Ames Ancestor'] gi|65321963|ref|ZP_00394922.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] gi|30259342|gb|AAP28530.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Ames] gi|47505284|gb|AAT33960.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. 'Ames Ancestor'] Length = 365 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISNDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|160885072|ref|ZP_02066075.1| hypothetical protein BACOVA_03070 [Bacteroides ovatus ATCC 8483] gi|156109422|gb|EDO11167.1| hypothetical protein BACOVA_03070 [Bacteroides ovatus ATCC 8483] Length = 374 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 84/368 (22%), Positives = 147/368 (39%), Gaps = 36/368 (9%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + M++ IL+ + L G P A +I + +P+ F K S +++ ++ Sbjct: 13 RGSIGCMLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSL 72 Query: 69 SVMCLFIVPLLFLFYYGML----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + V L +L M+ M +L+ L N G VP+ LS E Sbjct: 73 FLITVIGVTLFYLLVPPMISEIGRMNDLLVTY-LTNGAGNNVPKNLS---------EFIH 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +++ ++LSE + D +PR + L L+I+F I+A F I Sbjct: 123 ENIDLQALNRVLSEENILAAIKDTVPRVWT-----LLAESLNILFSILASFIILLYVIFI 177 Query: 185 SQQLDSLGE---HLFPAYWKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +++ E HL P ++ S +V V + F G ++A G++ + + Sbjct: 178 LLDYEAIAEGWLHLLPNKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIID 237 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT------CLFLWGAIELFI 291 P +ALG+ + M+P I F + ++K C AI I Sbjct: 238 FPMAIALGLFIGALNMVPYLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQII 297 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L P ++G L L MG+LG+ I L L+ ++ I+ Sbjct: 298 QDTFLVPKIMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII---- 353 Query: 352 NKEKISSN 359 NKEKI + Sbjct: 354 NKEKIKYD 361 >gi|325697596|gb|EGD39481.1| permease [Streptococcus sanguinis SK160] Length = 366 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 15/259 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKEKISSN 359 + +E ++ +E K + S++ Sbjct: 347 LVREFVVEKEEKKAEGSAS 365 >gi|308182723|ref|YP_003926850.1| membrane protein [Helicobacter pylori PeCan4] gi|308064908|gb|ADO06800.1| membrane protein [Helicobacter pylori PeCan4] Length = 349 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPITIYELYHGNVNEAIFITLYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|328945816|gb|EGG39967.1| permease [Streptococcus sanguinis SK1087] Length = 360 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 15/254 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKE 354 + +E ++ +E K Sbjct: 347 LVREFVVEKEEKKR 360 >gi|260549333|ref|ZP_05823553.1| permease [Acinetobacter sp. RUH2624] gi|260407739|gb|EEX01212.1| permease [Acinetobacter sp. RUH2624] Length = 397 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 40/274 (14%) Query: 111 SDIPGGM-W-ASEL--WTKHLSHPQSLKILSE-------TFLKTN----GIDFIPRFASR 155 IP G+ W +EL W H Q ++I ++ +++TN I + ++ Sbjct: 91 DSIPAGIHWINAELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAVLLKLAQ 150 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 G+ F+ +++ + I F+F D + Q L L + A +I R V+ + Sbjct: 151 SGLNFIQIGGTLVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHSVLGAFV 210 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP------------GGAPISFT 263 G ++ + G+V L G+ + +G++ + ++IP + F Sbjct: 211 KGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAIIASLFQFG 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +LL+ G +F + A+E +I L+PFL+G I L + F ++ G + Sbjct: 271 MDWTHLLLVGVVF-----MIGQAVEGYI----LQPFLLGDKIGLSPVAVVFAVLAGAQLA 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G LG+ I + A+I V+ K +++N EK S Sbjct: 322 GFLGMLIALPVAAVIVVLLKH----LRDNYEKSS 351 >gi|258510443|ref|YP_003183877.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477169|gb|ACV57488.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 375 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 21/123 (17%) Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT---AIMAMIPGGAPISFTAVSIYLLIK 272 +GM ++ ++LG + LAG+ V ++T AI+A+I G ++ +++ ++I Sbjct: 238 IGMFVLGFPYAILLGILFGLAGLVPIVGSAILTVPWAIVALITGHVAVAIKVLALQVVIS 297 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 I+ + P ++ + L L T FGL G + MG +GLFIGP Sbjct: 298 ------------------IIRHAVEPKILADSVGLDTLATLFGLYVGFKVMGFIGLFIGP 339 Query: 333 VLM 335 +L+ Sbjct: 340 ILL 342 >gi|15611581|ref|NP_223232.1| hypothetical protein jhp0514 [Helicobacter pylori J99] gi|8928476|sp|Q9ZLR4|Y567_HELPJ RecName: Full=UPF0118 membrane protein jhp_0514 gi|4155053|gb|AAD06090.1| putative Inner membrane protein [Helicobacter pylori J99] Length = 349 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 13/165 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 KKI V ++R L I I EG+ G+ G +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGTMIIWFGHDGW-SLGILYGLASLVPAVGGA 240 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPFL 310 + + ++IY L G++ A + L+ + + ++D ++P L+ +K+ + Sbjct: 241 LIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVFIKKRIFKTTLKINEI 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--ESIMAIKENK 353 FF ++ G+ G G+ +GP + A + + E+ KE K Sbjct: 301 LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|229163588|ref|ZP_04291537.1| Sporulation integral membrane protein YtvI [Bacillus cereus R309803] gi|228619838|gb|EEK76715.1| Sporulation integral membrane protein YtvI [Bacillus cereus R309803] Length = 365 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKAHV 351 >gi|323144594|ref|ZP_08079182.1| hypothetical protein HMPREF9444_01862 [Succinatimonas hippei YIT 12066] gi|322415603|gb|EFY06349.1| hypothetical protein HMPREF9444_01862 [Succinatimonas hippei YIT 12066] Length = 358 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 ++RS +G+ ++A+ +G+V Y L GV + + GV+T ++IP G I + + I Sbjct: 191 IVRSNAIGIPLLAVIQGVVATIGYMLCGVNNALLFGVLTGFASIIPIVGTMIVWIPLVIG 250 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G++ + L + + D +R L L T FG++ G+ G +G+ Sbjct: 251 QYFDGSLLSTLGLAFYCIAIISQCDNVIRMILQKRMANTHPLITIFGVIAGLPIFGFMGV 310 Query: 329 FIGPVLMAL 337 GP+++++ Sbjct: 311 IFGPLIVSM 319 >gi|254779441|ref|YP_003057546.1| hypothetical protein HELPY_0810 [Helicobacter pylori B38] gi|254001352|emb|CAX29337.1| Conserved hypothetical protein; putative membrane protein [Helicobacter pylori B38] Length = 348 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|253997588|ref|YP_003049652.1| hypothetical protein Mmol_2223 [Methylotenera mobilis JLW8] gi|253984267|gb|ACT49125.1| protein of unknown function UPF0118 [Methylotenera mobilis JLW8] Length = 360 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 15/236 (6%) Query: 131 QSLKILSETFLKTNGIDFIPRFA---SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q IL+E + KT G +F A S GM + + +++ + + LF+ D + Q+ Sbjct: 131 QIQAILTENW-KTTG-NFAKNIALSLSSHGMTIIGWLGNVVLIPLVLFYLLVDWNILLQK 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +L ++I+ + V+ G + + + + WL G+ + +G++ Sbjct: 189 ISTLLPRSLIGKTQEIAADIDAVLAEFLRGQLTVMLLMSVFYATGLWLVGLEFALPIGIL 248 Query: 248 TAIMAMIPG---GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + ++ IP G ++ A+S +L GN+ + + + I + L P+LVG Sbjct: 249 SGLLGFIPYLGFGLGLTLAAIS-GVLQYGNLNDLIPVLIVFGIGQLVESMALTPWLVGDR 307 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 I L L F L+ G + G G+ + + A IAV ++ + ++ +SS+F Sbjct: 308 IGLHPLVVIFALMAGGQLFGFAGILLALPVSAAIAVGFRHA------KQKYLSSHF 357 >gi|317181882|dbj|BAJ59666.1| membrane protein [Helicobacter pylori F57] Length = 349 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|261838190|gb|ACX97956.1| outer membrane protein [Helicobacter pylori 51] gi|317179069|dbj|BAJ56857.1| membrane protein [Helicobacter pylori F30] Length = 348 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|255693730|ref|ZP_05417405.1| putative membrane protein [Bacteroides finegoldii DSM 17565] gi|260620481|gb|EEX43352.1| putative membrane protein [Bacteroides finegoldii DSM 17565] Length = 377 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 82/355 (23%), Positives = 141/355 (39%), Gaps = 36/355 (10%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 IL+ + L G P A +I + +P+ F K S L++ + ++ V + Sbjct: 24 ILMLIERLSGVLLPFFIAWLIAYMIYPLVKLFQYKLRLKSRILSIFCALFLISAIGVTVF 83 Query: 80 FLFYYGML-EMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L M+ EM + +V L N G VP+ LS E +++ +IL Sbjct: 84 YLLVPPMISEMSRMNDLLVTYLTNGAGNNVPKNLS---------EFIHEYVDLQALNRIL 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE--- 193 SE + D +PR + L L+I+F I F I +++ E Sbjct: 135 SEENILAAIKDTVPRLWT-----LLAESLNILFSIFTSFIILLYVVFILLDYEAIAEGWL 189 Query: 194 HLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 HL P ++ + R V + F G ++A G++ + + P +ALG+ Sbjct: 190 HLLPNKYRTFASNLVRDVQDGMNKYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIG 249 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVG 302 + M+P I F + ++K I A L ++ +++ I D L P ++G Sbjct: 250 ALNMVPYLQIIGFFPTVLLAILKAADTGENFWIIIACALAVFAVVQI-IQDTFLVPKIMG 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L L MG+LG+ I L L+ ++ I+ NKEKI Sbjct: 309 KITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKEKIK 359 >gi|315648858|ref|ZP_07901953.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] gi|315275826|gb|EFU39178.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] Length = 343 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 3/86 (3%) Query: 266 SIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 S+YLL G++F L FL+ I + ++ + L P ++G + + LP + G + +G Sbjct: 257 SVYLLATGDVFTGLGLIFLF--ILITVIRRVLEPKVIGDAVGIGALPALVSMYVGFKLVG 314 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 ++G FIGP+++ + + + K + IK Sbjct: 315 VIGFFIGPLVVIIYSAMRKAGLFQIK 340 >gi|325688460|gb|EGD30478.1| toxin secretion/phage lysis holin subfamily [Streptococcus sanguinis SK72] Length = 360 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 13/253 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + P +VG + LP L T + G GL+G+ + A+I + Sbjct: 288 IAVFQVVQLIEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRL 347 Query: 342 WKESIMAIKENKE 354 +E ++ +E K Sbjct: 348 VREFVVEKEEKKR 360 >gi|323353414|ref|ZP_08087947.1| permease [Streptococcus sanguinis VMC66] gi|322121360|gb|EFX93123.1| permease [Streptococcus sanguinis VMC66] Length = 365 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 15/254 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKE 354 + +E ++ +E E Sbjct: 347 LVREFVVEKEERNE 360 >gi|317177600|dbj|BAJ55389.1| membrane protein [Helicobacter pylori F16] Length = 348 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|315037883|ref|YP_004031451.1| permease [Lactobacillus amylovorus GRL 1112] gi|325956356|ref|YP_004291768.1| permease [Lactobacillus acidophilus 30SC] gi|312276016|gb|ADQ58656.1| putative permease [Lactobacillus amylovorus GRL 1112] gi|325332921|gb|ADZ06829.1| permease [Lactobacillus acidophilus 30SC] gi|327183175|gb|AEA31622.1| permease [Lactobacillus amylovorus GRL 1118] Length = 400 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 10/187 (5%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII M++ LFF +DG + + + + K+ + + S Sbjct: 178 AVSIITMVVMTLITAPFILFFMLKDGHQLRPYITKFAPEKWQPSFSKLLYDINYALASYI 237 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN 274 G +A G++ Y + G+P AL ++ + +IP G PI+ V + ++ Sbjct: 238 RGQITVAFWVGVMFAIGYSVVGLPYGAALAILAGFLNLIPYFGTPIALIPVIVIAIMTSG 297 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 L ++ IE I + L P ++G + + + T L+G GL G+ G + Sbjct: 298 SMLVKVLVVF-VIEQTIETRVLSPLVMGNKMAMHPVTTILLLIGASSVWGLWGVIFGIPI 356 Query: 335 MALIAVI 341 A++ +I Sbjct: 357 YAILKII 363 >gi|254508228|ref|ZP_05120352.1| hypothetical protein VPMS16_2375 [Vibrio parahaemolyticus 16] gi|219548845|gb|EED25846.1| hypothetical protein VPMS16_2375 [Vibrio parahaemolyticus 16] Length = 359 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 85/355 (23%), Positives = 155/355 (43%), Gaps = 48/355 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++ A II +PI+ K ++++ V + + +VPLLF+F Sbjct: 28 YINSIVMAFIISLLMFPIHEWIEKKLPNHPNISSLLSCVVLTFIIVVPLLFVF------- 80 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGID 147 +V + +Q+ V +W++ GG+ HP +K LS T+L + ++ Sbjct: 81 AAIVQQGSAFSQN---VYQWVTH--GGI------QTLFEHPWVVKGLSLVNTYLPFDTVE 129 Query: 148 ------FIPRFASRFGMIFL-----------DYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + +FA+ FG + ++ + M+ LFF RD ++ S Sbjct: 130 PQEIAQKVGQFATTFGSNLVGISAKILGDATNFLMDFFLMLFVLFFLLRD----HDKIIS 185 Query: 191 LGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H+ P + K+ V +V +S +G + AI +G+ G WLAG P + G + Sbjct: 186 AIRHILPLSRSQEDKLLDEVEQVSKSAVMGSFLTAIAQGIAGGIGMWLAGFPG-LFWGTM 244 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV--GGP 304 + IP G + + ++YL + G+ A L +W + +D LRP L+ G Sbjct: 245 MGFASFIPVVGTALIWIPATVYLYLTGDSTWAIFLAIWSIAIVGSIDNLLRPLLMQGSGN 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF L+GG+ GL+GL GP++ A+ V++ K+ ++ N Sbjct: 305 AGMSTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLDRQDQN 359 >gi|22297616|ref|NP_680863.1| hypothetical protein tll0072 [Thermosynechococcus elongatus BP-1] gi|22293793|dbj|BAC07625.1| tll0072 [Thermosynechococcus elongatus BP-1] Length = 395 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 63/306 (20%), Positives = 130/306 (42%), Gaps = 36/306 (11%) Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 FL + ++++ L +VP LF + ++L++++ P W + + Sbjct: 87 FLLALVLIAIIALVVVPNLFN------QAQQLIARL----------PEWFNSSQRRLLEF 130 Query: 121 ELWTKHLSHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W L+ P ++ + L+ L+ D + A + L S + ++I L Sbjct: 131 GQWVDSLNLPVTVDVDALANQLLEKLK-DQLQSLAREALNLILGTLSSAVDVLINLILTV 189 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYW 234 F + Q D L L + V + IR S F+G ++ + G+ L + + Sbjct: 190 VLTFYLLQHGDELWNGLLSWLPNTVRPTVSETIRRSFESYFIGQLVLGLCMGIGLTTIFI 249 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFI 291 VP + GVI +MA++P G + ++S+ + ++ ++ A FL+ Sbjct: 250 FLKVPYGLLFGVIIGVMALVPFGGTVGIISISLLVALQDVWLSLKVAGFAFLYQQ----F 305 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ + P ++G L + F ++ G R GL+G+ I IAV+ K +++++ Sbjct: 306 LENVVAPRIIGSFTGLNPVWVFLAILTGARASGLVGVLIA----VPIAVVIKTFLVSVRS 361 Query: 352 --NKEK 355 N E+ Sbjct: 362 RLNSEE 367 >gi|315586748|gb|ADU41129.1| membrane protein [Helicobacter pylori 35A] Length = 348 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 15/167 (8%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G+ W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLV--------GGPIKLP 308 + + ++IY L GN+ N T +I L ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNV-NETIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKIN 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 299 EMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|317013986|gb|ADU81422.1| hypothetical protein HPGAM_02910 [Helicobacter pylori Gambia94/24] Length = 349 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 13/165 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 KKI V ++R L I I EG+ G+ G +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGAMIIWFGHDGW-SLGILYGLASLVPAVGGA 240 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPFL 310 + + ++IY L G++ A + L+ + + ++D ++P L+ +K+ + Sbjct: 241 LIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVFIKKRIFKTTLKINEI 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--ESIMAIKENK 353 FF ++ G+ G G+ +GP + A + + E+ KE K Sbjct: 301 LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|229105224|ref|ZP_04235873.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-28] gi|228678150|gb|EEL32378.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-28] Length = 367 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q+ L + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVALFIGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKAHV 351 >gi|115376481|ref|ZP_01463715.1| putative membrane protein [Stigmatella aurantiaca DW4/3-1] gi|115366484|gb|EAU65485.1| putative membrane protein [Stigmatella aurantiaca DW4/3-1] Length = 396 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIG 224 + M+IA +F +G +QL + E + P + + ++ + V RS A Sbjct: 173 VMMLIAFYFLLVEG----KQLVAWIESVSPLRRGQTTELLTEFRGVTRSVLSSTLATAGV 228 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 + L +++ GVP V +T A+IP GA + A ++ LL G+ A L L Sbjct: 229 QALAALVGFFITGVPVPVFFAAVTFFFALIPAIGAAVVCVAAAVLLLATGHPVAALVLAL 288 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 WG I + + D ++P L + + FF L+GG+ G +GL +GP+++A Sbjct: 289 WGIIVVGLADNVVKPLLARRGMNMHGAIVFFALLGGLAVFGAIGLLLGPLIVA 341 >gi|224438291|ref|ZP_03659218.1| hypothetical protein HcinC1_09901 [Helicobacter cinaedi CCUG 18818] gi|313144731|ref|ZP_07806924.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129762|gb|EFR47379.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 355 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 26/227 (11%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI- 206 ++ F+S+ G L + + F+I+ LFF++ G Q D + E L P +IS + Sbjct: 131 YVLNFSSQLGKSSLGFMVDTGFIIVFLFFYFLYG---KQAYDYVIE-LIPFENIQISNVL 186 Query: 207 --VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 V VI+ F + + +G+ G G V G++ +++P G + + Sbjct: 187 DEVTNVIKVVFYTSLVNIVLQGVAFGILIMFFGYDG-VFFGMLYGFASIVPIVGGGLVWL 245 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVG--------GPIKLPFLPTFF 314 ++ Y GN NA + L+ I + +D ++P L+G +++ L FF Sbjct: 246 PLAGYEFYLGNTQNAIIIALYALIVCAVLIDNVIKPILIGLINKKVLKTSVRINELLIFF 305 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIW--------KESIMAIKENK 353 ++ G+ ++G G+ +GP + AL + KES+ E K Sbjct: 306 AILAGLTSIGFWGIILGPAITALFISLLRIYRKQTAKESLTPTHEEK 352 >gi|320546512|ref|ZP_08040827.1| membrane protein [Streptococcus equinus ATCC 9812] gi|320448897|gb|EFW89625.1| membrane protein [Streptococcus equinus ATCC 9812] Length = 395 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 18/240 (7%) Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 WLS+ + +EL ++ +E+F K N D+ FAS + ++II Sbjct: 141 WLSN-----YQTELQDMLVNISNKAVDYAESFSK-NAFDWASNFASAIARV----TVAII 190 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGE 225 LF+F RD + D L + L + +RI + K + G +AI Sbjct: 191 MSPFILFYFLRDSHKMK---DGLIKALPTKMRRPSARILGDINKQLAGYVQGQVTVAIVV 247 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLW 284 G++ + + G+ G+I + MIP G+ ++ V I +++G I L + Sbjct: 248 GIMFTVFFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGIVQGPIMLVKVLVTF 307 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IE I + + P ++G + + + F L+ G+ G+F+G + A I V+ KE Sbjct: 308 -VIEQTIEGRFVAPLVLGSKLSIHPITIMFILLTSGSMFGIWGVFLGIPIYASIKVVVKE 366 >gi|324992095|gb|EGC24017.1| permease [Streptococcus sanguinis SK405] gi|324994189|gb|EGC26103.1| permease [Streptococcus sanguinis SK678] gi|327490609|gb|EGF22390.1| permease [Streptococcus sanguinis SK1058] Length = 365 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 15/254 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKE 354 + +E ++ +E E Sbjct: 347 LVREFVVEKEERNE 360 >gi|167633918|ref|ZP_02392241.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0442] gi|254741741|ref|ZP_05199428.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Kruger B] gi|167530719|gb|EDR93421.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0442] Length = 372 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 179 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVIDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKARV 358 >gi|300866882|ref|ZP_07111557.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335132|emb|CBN56719.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 354 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 26/251 (10%) Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ ELV+++ P W++ W K+ + P L+ F K Sbjct: 94 QLNELVTRL----------PSWINSGAEQFETLHNWAKNRNLPIDLR----GFAKQLSER 139 Query: 148 FIPRFASRFGMIFL------DYCLSIIFMIIALFFFYRDGFSISQQL-DSLGEHLFPAYW 200 F + S G I L ++ ++ F+ G Q+L D L + P Sbjct: 140 FSTQLQSIIGQILTVVLGAAGSLLDLMITVVLTFYLLLHG----QRLWDGLFQWFPPELG 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +I + + ++ F+G +A GL + A+ + VP + G+ IM +IP GA + Sbjct: 196 SQIRESLRRNFQNYFIGQATLATFMGLSMTVAFLILQVPFGLLFGLAVGIMTLIPLGAGL 255 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 S + VS+ + + L + ++ +++ + P L+GG L + F L+ Sbjct: 256 SISIVSLLMALNNFWLGMKVLAVATVLDQ-VIENGIAPRLLGGFTGLNPVWIFISLLIAT 314 Query: 321 RTMGLLGLFIG 331 + GL+GL + Sbjct: 315 KVGGLIGLLVA 325 >gi|289580082|ref|YP_003478548.1| hypothetical protein Nmag_0398 [Natrialba magadii ATCC 43099] gi|289529635|gb|ADD03986.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 425 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP+ V L V+T + A++P GA + VS+YLL G A L +G+I + D + Sbjct: 228 VPAVVLLSVVTFVFALLPLIGAFGVWVPVSLYLLATGQFVVAGILVAYGSI-VSASDTYI 286 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 RP L+G G+ GG+ G +GLFIGPV++ Sbjct: 287 RPALIGRTSAFNSAIIVVGIFGGLIIFGAVGLFIGPVVLG 326 >gi|225016793|ref|ZP_03705985.1| hypothetical protein CLOSTMETH_00705 [Clostridium methylpentosum DSM 5476] gi|224950461|gb|EEG31670.1| hypothetical protein CLOSTMETH_00705 [Clostridium methylpentosum DSM 5476] Length = 405 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 12/161 (7%) Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 +SRI V+ S G + A+ G+V G + VP+ LG+I + ++IP GA Sbjct: 221 LSRIA-DVLYSFLYGQALDALFVGIVTGIILAVIQVPNAAVLGLIYGLFSLIPYFGAMFG 279 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG--LVGG 319 V + + G F+ I +I + P ++G I + L FG L GG Sbjct: 280 VLTVCLLTFLSGGFTKLILAFVLITILQWIDGNIINPKIIGNAIGIKPLYVIFGVTLFGG 339 Query: 320 VRTMGLLGLFIGPVLMALIA------VIWKESIMAIKENKE 354 + G++G+ IGP LMA+I V +E + A+KE E Sbjct: 340 L--FGIVGMLIGPPLMAIIIELVQEFVGDRERVKAVKEGLE 378 >gi|327468532|gb|EGF14011.1| permease [Streptococcus sanguinis SK330] Length = 364 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 13/252 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + P +VG + LP L T + G GL+G+ + A+I + Sbjct: 288 IAVFQVVQLIEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRL 347 Query: 342 WKESIMAIKENK 353 +E ++ +E K Sbjct: 348 VREFVVEKEEKK 359 >gi|310819639|ref|YP_003951997.1| hypothetical protein STAUR_2366 [Stigmatella aurantiaca DW4/3-1] gi|309392711|gb|ADO70170.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 390 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIG 224 + M+IA +F +G +QL + E + P + + ++ + V RS A Sbjct: 167 VMMLIAFYFLLVEG----KQLVAWIESVSPLRRGQTTELLTEFRGVTRSVLSSTLATAGV 222 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 + L +++ GVP V +T A+IP GA + A ++ LL G+ A L L Sbjct: 223 QALAALVGFFITGVPVPVFFAAVTFFFALIPAIGAAVVCVAAAVLLLATGHPVAALVLAL 282 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 WG I + + D ++P L + + FF L+GG+ G +GL +GP+++A Sbjct: 283 WGIIVVGLADNVVKPLLARRGMNMHGAIVFFALLGGLAVFGAIGLLLGPLIVA 335 >gi|206977140|ref|ZP_03238039.1| sporulation integral membrane protein YtvI [Bacillus cereus H3081.97] gi|217962076|ref|YP_002340646.1| sporulation integral membrane protein YtvI [Bacillus cereus AH187] gi|206744625|gb|EDZ56033.1| sporulation integral membrane protein YtvI [Bacillus cereus H3081.97] gi|217064824|gb|ACJ79074.1| sporulation integral membrane protein YtvI [Bacillus cereus AH187] gi|324328488|gb|ADY23748.1| sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar finitimus YBT-020] Length = 372 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 179 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKARV 358 >gi|49478696|ref|YP_038640.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140913|ref|YP_085916.1| permease [Bacillus cereus E33L] gi|118479743|ref|YP_896894.1| permease [Bacillus thuringiensis str. Al Hakam] gi|196040923|ref|ZP_03108221.1| sporulation integral membrane protein YtvI [Bacillus cereus NVH0597-99] gi|196047486|ref|ZP_03114697.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB108] gi|225866573|ref|YP_002751951.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB102] gi|49330252|gb|AAT60898.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974382|gb|AAU15932.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] gi|118418968|gb|ABK87387.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|196021701|gb|EDX60397.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB108] gi|196028377|gb|EDX66986.1| sporulation integral membrane protein YtvI [Bacillus cereus NVH0597-99] gi|225789224|gb|ACO29441.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB102] Length = 372 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 179 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKARV 358 >gi|20091671|ref|NP_617746.1| hypothetical protein MA2846 [Methanosarcina acetivorans C2A] gi|19916842|gb|AAM06226.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 405 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 3/136 (2%) Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G++ G YW GVP + G++T IMA++P GA + +++Y ++ + F A L Sbjct: 231 GIIGGVLYWALGVPYSLIWGILTFIMALLPVVGAGTVYGLLALYYVLIDDFFTAGALIFL 290 Query: 285 GAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA-LIAVIW 342 G + L I+ D +RP + T V +G +G+ IGP+ L+A Sbjct: 291 GIVFLSIIPDFIMRPRFARNRAAIHPAITLVAFAAPVFVLGPIGIIIGPLTYGFLLAAFR 350 Query: 343 KESIMAIKENKEKISS 358 I+ + + S+ Sbjct: 351 TRKILGTSSAQTESSA 366 >gi|330508411|ref|YP_004384839.1| hypothetical protein MCON_2605 [Methanosaeta concilii GP-6] gi|328929219|gb|AEB69021.1| Domain of unknown function protein (DUF20) [Methanosaeta concilii GP-6] Length = 355 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 G++ + L G+P +GV+ A+ ++P G P F +++Y LI G++F L + Sbjct: 226 SGVMAAIGFSLLGIPYPFLMGVVVAVFTLLPLLGPPFVFIPIAVYYLIVGDLFRCLILLV 285 Query: 284 WGAIELFIV-DKTLRPFL 300 +G + L ++ + +RP L Sbjct: 286 FGTVVLMVIPENVIRPHL 303 >gi|21228979|ref|NP_634901.1| hypothetical protein MM_2877 [Methanosarcina mazei Go1] gi|20907519|gb|AAM32573.1| hypothetical protein MM_2877 [Methanosarcina mazei Go1] Length = 347 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 73/328 (22%), Positives = 145/328 (44%), Gaps = 40/328 (12%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 T P+Y + K + A++ + + L ++PL FL ++E+++ +L NQ Sbjct: 41 TFKPLYRFLLKKTRLNRQVSALLVIIISIFLVLIPLFFLLSMVIIEIQQ-----ILLNQE 95 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN----GIDFIPRFASRFGM 158 I M E+ + ++ S +SE + N +D + + + Sbjct: 96 AI------------MATIEVGDRLFNNFFSRFGISENIFQINFEERVMDLATQIINFLSL 143 Query: 159 IFLDYCLSI----IFMIIALFFFYRDGFSISQQLDSLGEHLFPA--YWKKISRIV----P 208 + + SI I ++I F FY + ++ + ++LF A + K + I+ Sbjct: 144 LVVGSIQSISHRAIGLLIMYFLFY---YLLTGEESDFMQNLFLAIPFNTKNTVILLNEFR 200 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 ++R+T + IA+ EG +L ++ + GV G I A+++ +P G PI + I Sbjct: 201 NIVRTTLIASGAIAVIEGGILIVSFLIFGVQGAFLWGSIAAVLSFLPVVGTPIIWIPAVI 260 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKT-LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 ++ + A + + G I L + D + RP + K+ + G+ G+ GL+ Sbjct: 261 IQFLQQDYVAAAGILITG-IFLSVSDSSFFRPVIQKKVGKIHPFQSLLGIFIGIPLFGLV 319 Query: 327 GLFIGPVLMA---LIAVIWKESIMAIKE 351 G+ IGP+L+A L ++ E ++ KE Sbjct: 320 GIIIGPLLLAYFYLTVKMFSEEYLSDKE 347 >gi|170685913|ref|ZP_02877136.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0465] gi|196033171|ref|ZP_03100584.1| sporulation integral membrane protein YtvI [Bacillus cereus W] gi|218905823|ref|YP_002453657.1| sporulation integral membrane protein YtvI [Bacillus cereus AH820] gi|254687404|ref|ZP_05151260.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CNEVA-9066] gi|254724967|ref|ZP_05186750.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A1055] gi|170670377|gb|EDT21117.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0465] gi|195994600|gb|EDX58555.1| sporulation integral membrane protein YtvI [Bacillus cereus W] gi|218535804|gb|ACK88202.1| sporulation integral membrane protein YtvI [Bacillus cereus AH820] Length = 372 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 179 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 239 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 288 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKARV 358 >gi|327459002|gb|EGF05350.1| permease [Streptococcus sanguinis SK1057] Length = 365 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 15/254 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKE 354 + +E ++ +E E Sbjct: 347 LVREFVVEKEERNE 360 >gi|269967144|ref|ZP_06181211.1| hypothetical protein VMC_26410 [Vibrio alginolyticus 40B] gi|269828281|gb|EEZ82548.1| hypothetical protein VMC_26410 [Vibrio alginolyticus 40B] Length = 382 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH--VALGVITAIMAMIPGGA 258 K + ++ I+S LG+ +A + L++G+ +++ GVP+ + L ++ +A +P A Sbjct: 208 KSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTLLLMILCIAQLP--A 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ V ++ + + AT +W + + + +P L+G + +P G +G Sbjct: 266 LLAVLPVIGFMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIG 324 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G++GLF+G V++A IW E Sbjct: 325 GMLFYGIVGLFLGAVILA----IWYE 346 >gi|229158199|ref|ZP_04286266.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 4342] gi|228625157|gb|EEK81917.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 4342] Length = 344 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 151 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 210 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 211 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 259 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 260 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 319 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 320 VLLNTLHKARV 330 >gi|324990266|gb|EGC22204.1| permease [Streptococcus sanguinis SK353] Length = 364 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 15/258 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPGKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKEKISS 358 + +E ++ +E K I Sbjct: 347 LVREFVVEKEEKKALIKE 364 >gi|262368618|ref|ZP_06061947.1| PerM family permease [Acinetobacter johnsonii SH046] gi|262316296|gb|EEY97334.1| PerM family permease [Acinetobacter johnsonii SH046] Length = 406 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 76/361 (21%), Positives = 155/361 (42%), Gaps = 68/361 (18%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE---------SSTFLAVIATVS 69 +IL LY LK P + A ++ + ++S + K + S+ F+ + ++ Sbjct: 17 LILWVLYLLKPVVLPFIGAFLVAY----LFSPLVDKLHKIGLPRWLSISAVFIGIGVVIT 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----IPGGMWASELWTK 125 + ++VPL++ M + S + AN +P WLSD +P + ++ Sbjct: 73 LAFWYLVPLVW--EQLMYAKNSIPSGIHWANYKFLP---WLSDSFNLVPMELDVDQISAA 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + Q T + I + ++ G+ F+ +++ + I F+F D Sbjct: 128 IMEYVQ-------TNYSADSIQAMIAKLAQSGLNFIQIGGTVVLIPIIAFYFLLDW---D 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTF-------------------LGMTIIAIGEG 226 + LDS L P +++ + ++ K S +G+ +I + G Sbjct: 178 RMLDSF-RRLIPRRYEEQTLVIVKECHSVLGAFVKGQFLVMVLLGVVYAMGLQLIGLEVG 236 Query: 227 LVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 L++G L + ++ A+G+I A++A + F + LL+ G +F + Sbjct: 237 LIIGMVAGLCSIIPYLGFAVGIIAAVIASL-----FQFGIDWMQLLLVGVVF-----MIG 286 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 A+E +I L+PFL+G I L + F ++ G + G+LG+ I + A+I V+ + Sbjct: 287 QAVEGYI----LQPFLLGDKIGLSPVAVVFAVLAGAQLGGILGMLIALPVAAVIVVLLRH 342 Query: 345 S 345 + Sbjct: 343 A 343 >gi|237713414|ref|ZP_04543895.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406786|ref|ZP_06083335.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646015|ref|ZP_06723680.1| membrane family protein [Bacteroides ovatus SD CC 2a] gi|294806044|ref|ZP_06764904.1| membrane family protein [Bacteroides xylanisolvens SD CC 1b] gi|229446653|gb|EEO52444.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355489|gb|EEZ04580.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638586|gb|EFF56939.1| membrane family protein [Bacteroides ovatus SD CC 2a] gi|294446763|gb|EFG15370.1| membrane family protein [Bacteroides xylanisolvens SD CC 1b] gi|295084671|emb|CBK66194.1| Predicted permease [Bacteroides xylanisolvens XB1A] Length = 377 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 80/350 (22%), Positives = 137/350 (39%), Gaps = 36/350 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ ++LSE + Sbjct: 91 ISEIGRMNDLLV-TYLTNGAGNNVPKSLS---------EFIHENIDLQALNRVLSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I +++ E HL P Sbjct: 141 AAIKDTVPRVWT-----LLAESLNILFSILASFIILLYVIFILLDYEAIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNAT------CLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I F + ++K C AI I D L P ++G L Sbjct: 256 YLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ NKEKI + Sbjct: 316 AIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKEKIKYD 361 >gi|91223164|ref|ZP_01258430.1| hypothetical protein V12G01_04956 [Vibrio alginolyticus 12G01] gi|91191977|gb|EAS78240.1| hypothetical protein V12G01_04956 [Vibrio alginolyticus 12G01] Length = 382 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH--VALGVITAIMAMIPGGA 258 K + ++ I+S LG+ +A + L++G+ +++ GVP+ + L ++ +A +P A Sbjct: 208 KSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTLLLMILCIAQLP--A 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ V ++ + + AT +W + + + +P L+G + +P G +G Sbjct: 266 LLAVLPVIGFMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIG 324 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G++GLF+G V++A IW E Sbjct: 325 GMLFYGIVGLFLGAVILA----IWYE 346 >gi|261839604|gb|ACX99369.1| membrane protein [Helicobacter pylori 52] Length = 348 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITIILEGVAFGLMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|260174265|ref|ZP_05760677.1| putative permease [Bacteroides sp. D2] gi|293370047|ref|ZP_06616614.1| membrane family protein [Bacteroides ovatus SD CMC 3f] gi|299147768|ref|ZP_07040831.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|315922536|ref|ZP_07918776.1| conserved hypothetical protein [Bacteroides sp. D2] gi|292634965|gb|EFF53487.1| membrane family protein [Bacteroides ovatus SD CMC 3f] gi|298513951|gb|EFI37837.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|313696411|gb|EFS33246.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 377 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 80/350 (22%), Positives = 137/350 (39%), Gaps = 36/350 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ ++LSE + Sbjct: 91 ISEIGRMNDLLV-TYLTNGAGNNVPKNLS---------EFIHENIDLQALNRVLSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I +++ E HL P Sbjct: 141 AAIKDTVPRVWT-----LLAESLNILFSILASFIILLYVIFILLDYEAIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNAT------CLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I F + ++K C AI I D L P ++G L Sbjct: 256 YLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ NKEKI + Sbjct: 316 AIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKEKIKYD 361 >gi|298484321|ref|ZP_07002483.1| membrane protein [Bacteroides sp. D22] gi|298269511|gb|EFI11110.1| membrane protein [Bacteroides sp. D22] Length = 360 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 34/345 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMIYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ ++LSE + Sbjct: 91 ISEIGRMNDLLVTY-LTNGAGNNVPKNLS---------EFIHENIDLQALNRVLSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I +++ E HL P Sbjct: 141 ATIKDTVPRVWT-----LLAESLNILFSILASFIILLYVIFILLDYEAIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I F + ++K I A L ++ +++ I D L P ++G L Sbjct: 256 YLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQI-IQDTFLVPKIMGKITGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L MG+LG+ I L L+ ++ I+ ++NK Sbjct: 315 PAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEKNK 359 >gi|229824112|ref|ZP_04450181.1| hypothetical protein GCWU000282_01416 [Catonella morbi ATCC 51271] gi|229786466|gb|EEP22580.1| hypothetical protein GCWU000282_01416 [Catonella morbi ATCC 51271] Length = 379 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 31/281 (11%) Query: 101 QHGIPVPRWLSDIPG-GMWASELWTKHLSH-PQSLKILSE-------------TFLKTNG 145 Q + R++ IPG W ++ ++ PQ ++S+ T L T Sbjct: 103 QLSTAISRFIEVIPGVSTWLQRAIEEYDAYFPQLQTLMSQLNINWGSLIQQSMTVLNTLS 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK---K 202 +F+ + + + SI+ +++AL+ + Q + +L P++ + Sbjct: 163 SNFLNITFNTITGVASNTINSILSLMVALYILGSKERLLLQGKRVIMAYLKPSHAQTLLD 222 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG----VPSHVALGVITAIMAMIP-GG 257 I R++ + + F+GMT+ EG++LGS +A +P LGVI +MA+IP G Sbjct: 223 IIRLMNESFTNFFVGMTL----EGIILGSLVTVAASIFNLPYAGMLGVIAGVMALIPIIG 278 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 IS AV +L+ + A + I + + + P +VGG I LP L Sbjct: 279 GYIS-AAVGTLMLLAVSPSQALFYLVMVIIIMQLEGNLIYPRVVGGSIGLPGLWVLVAFT 337 Query: 318 GGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G MG+ G+ +G P+ L ++ ++ +M +E ++ ++ Sbjct: 338 VGGGLMGISGMILGIPLAATLYKLLGRDVLM--REKRQTLT 376 >gi|229032241|ref|ZP_04188214.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1271] gi|228729021|gb|EEL80024.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1271] Length = 365 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|288905039|ref|YP_003430261.1| hypothetical protein GALLO_0834 [Streptococcus gallolyticus UCN34] gi|306831112|ref|ZP_07464273.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978008|ref|YP_004287724.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731765|emb|CBI13326.1| hypothetical membrane protein [Streptococcus gallolyticus UCN34] gi|304426678|gb|EFM29789.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177936|emb|CBZ47980.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 395 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 13/212 (6%) Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +E+F K N ID+ FAS + ++II LF+F RD + + L + L Sbjct: 164 AESFSK-NAIDWASNFASAIARV----TVAIIMSPFILFYFLRDS---GKMKEGLLKTLP 215 Query: 197 PAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ISR+ + K + G +AI G++ + + G+ G+I + M Sbjct: 216 TRMRRPISRVLGDINKQLAGYVQGQVTVAIVVGIMFTIFFNIIGLRYAATFGIIAGFLNM 275 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G+ ++ V I +++G I L + +E I + + P ++G + + + Sbjct: 276 IPYLGSFLAMVPVVIMGVVQGPIMLIKVLITF-VVEQTIEGRFVSPLVLGSKLSIHPITI 334 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ G+ G+F+G + A I V+ KE Sbjct: 335 MFILLTSGSMFGVWGVFLGIPIYASIKVVVKE 366 >gi|229093693|ref|ZP_04224792.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-42] gi|228689578|gb|EEL43386.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-42] Length = 365 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|222098058|ref|YP_002532115.1| hypothetical protein BCQ_4400 [Bacillus cereus Q1] gi|228987844|ref|ZP_04147953.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141322|ref|ZP_04269860.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST26] gi|229198746|ref|ZP_04325443.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1293] gi|221242116|gb|ACM14826.1| membrane protein, putative [Bacillus cereus Q1] gi|228584729|gb|EEK42850.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1293] gi|228642103|gb|EEK98396.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST26] gi|228771892|gb|EEM20349.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 365 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|228935904|ref|ZP_04098714.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229186851|ref|ZP_04314006.1| Sporulation integral membrane protein YtvI [Bacillus cereus BGSC 6E1] gi|228596588|gb|EEK54253.1| Sporulation integral membrane protein YtvI [Bacillus cereus BGSC 6E1] gi|228823672|gb|EEM69494.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 365 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|42783773|ref|NP_981020.1| hypothetical protein BCE_4727 [Bacillus cereus ATCC 10987] gi|42739703|gb|AAS43628.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 365 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|257053164|ref|YP_003130997.1| protein of unknown function UPF0118 [Halorhabdus utahensis DSM 12940] gi|256691927|gb|ACV12264.1| protein of unknown function UPF0118 [Halorhabdus utahensis DSM 12940] Length = 336 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 8/172 (4%) Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTII----AIGEGLVLGSAYWLAGVPSHVALGVI 247 + PA + + + + + +R T G+ ++ +G ++ ++L G + V L V+ Sbjct: 163 ARRVVPAEYHDVVQALHERLRDTLFGLYVLQGATGVGTFVIALPVFFLLGYDAAVTLAVL 222 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPI 305 + ++ +P P V + + A L + D +RP L Sbjct: 223 SGVLQFVPIIGPSVLIGVLVLTEVLAENVTAAILVGVVGFVFVAGLPDVLIRPRLSAVAA 282 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 LP F G GGV +MG +G+ GPV++AL+A ++A +++ + + Sbjct: 283 DLPGSLYFIGFTGGVLSMGAIGIIAGPVVVALLA--ESVELLASEQHPDAVE 332 >gi|217033512|ref|ZP_03438941.1| hypothetical protein HP9810_905g31 [Helicobacter pylori 98-10] gi|216944037|gb|EEC23468.1| hypothetical protein HP9810_905g31 [Helicobacter pylori 98-10] Length = 331 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 165 KKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFG--HDGWSLGILYGLASLVPAVGG 222 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 223 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 282 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 283 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 328 >gi|296330760|ref|ZP_06873236.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675767|ref|YP_003867439.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296152074|gb|EFG92947.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414011|gb|ADM39130.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 369 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 63/305 (20%), Positives = 127/305 (41%), Gaps = 36/305 (11%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ------ 131 L++L + G+L V+ +Q V +++P + + TK LSH Q Sbjct: 73 LIYLLFIGLLAFVSASVGPVITSQ----VTGLFNNLPDYIKQIQSLTKDLSHSQWFTWMM 128 Query: 132 -----SLKILSET---FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S+ + ++ FL+ + ++ FG++ + L II + LF+ +DG Sbjct: 129 NQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVV-TNITLVIITVPFILFYMLKDG-- 185 Query: 184 ISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + L + PA ++ KI + + + + F G +I + G Y +AG+P Sbjct: 186 --HRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGLP 243 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----T 295 + LG++ AI +IP P A ++ + ++ L+ I + IV + Sbjct: 244 YALILGIVMAITNIIPYVGPFLGAAPAVIV----GFMDSPAKALFAIIVVVIVQQLDGNL 299 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK-ENKE 354 L P ++G + L L+G G+LG+ + + A++ + + K + Sbjct: 300 LSPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIVRLFKLRQRS 359 Query: 355 KISSN 359 ++ N Sbjct: 360 RLEEN 364 >gi|218676834|ref|YP_002395653.1| hypothetical protein VS_II1074 [Vibrio splendidus LGP32] gi|218325102|emb|CAV26948.1| putative membrane protein [Vibrio splendidus LGP32] Length = 366 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 8/194 (4%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F + AS G + + II IIA F + + L L +++ ++ Sbjct: 149 QFATKAASVLGSLGGGFIQFIISTIIA-GAFMSNADKCQTGVTHLVARLTDGKGEELVQL 207 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAMIPGGAPI-SFT 263 +RS G+ +A+ + ++ +AGVP+ AL V+ + +P PI + Sbjct: 208 SKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAAFWALAVLLIAIIQLP---PILALL 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 IY+ + A+ +W I + D L+P L+ +P L G +GG+ Sbjct: 265 PAIIYMFSVESTLAASLFLVW-CILVSGSDAILKPMLLSRGSHIPMLVILLGALGGMAMS 323 Query: 324 GLLGLFIGPVLMAL 337 G++GLF+G V+++L Sbjct: 324 GIVGLFVGAVILSL 337 >gi|47565007|ref|ZP_00236050.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47557793|gb|EAL16118.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 365 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|228917234|ref|ZP_04080791.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929643|ref|ZP_04092661.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948321|ref|ZP_04110604.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124162|ref|ZP_04253354.1| Sporulation integral membrane protein YtvI [Bacillus cereus 95/8201] gi|228659464|gb|EEL15112.1| Sporulation integral membrane protein YtvI [Bacillus cereus 95/8201] gi|228811308|gb|EEM57646.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830030|gb|EEM75649.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842435|gb|EEM87526.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 365 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++Q++ + Y K I + K + + T + MT Sbjct: 172 LVFVLLATFFISYDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKARV 351 >gi|125717282|ref|YP_001034415.1| permease, putative [Streptococcus sanguinis SK36] gi|125497199|gb|ABN43865.1| Permease, putative [Streptococcus sanguinis SK36] Length = 360 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 13/253 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + P +VG + LP L T + G GL+G+ + A+I + Sbjct: 288 IAVFQLVQLIEGNIIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRL 347 Query: 342 WKESIMAIKENKE 354 +E ++ +E K Sbjct: 348 VREFVVEKEEKKR 360 >gi|89096364|ref|ZP_01169257.1| membrane protein [Bacillus sp. NRRL B-14911] gi|89089218|gb|EAR68326.1| membrane protein [Bacillus sp. NRRL B-14911] Length = 343 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 20/166 (12%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-- 258 +K S KVI + F +IAI ++ A W+ P VAL ++ ++ +IP Sbjct: 189 RKFSMTFGKVIEAQF----VIAIVNCILTTLALWIMDFPQLVALSLMVLVLGLIPVAGVI 244 Query: 259 ----PISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P++ A SI ++L+ I + AIE +I L P L+ +LP T Sbjct: 245 ISMIPLTIIAYSIGGFMLVGYIILVVMVI---HAIEAYI----LNPKLMSSKTELPVFYT 297 Query: 313 FFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 F L+ G+ GL +G PV M L+ ++ + I + + ++S Sbjct: 298 FIVLIFSEHFFGIWGLIVGIPVFMFLLDILGVKEIAPKQTKQARVS 343 >gi|297518809|ref|ZP_06937195.1| putative inner membrane protein [Escherichia coli OP50] Length = 318 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 56/283 (19%), Positives = 123/283 (43%), Gaps = 15/283 (5%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 +WP+ + ++ T+ ++ +FI+P+ L +++ + K + + Sbjct: 46 IATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPI-ALLVNSIVDGSGPLIKAISSGD 104 Query: 102 HGIPVPRWLSDIPGGMWASELWT--KHLSHPQSLKILSET--FLKTNGIDFIPRFASRFG 157 +P WL+ IP + ++L+ +L I+++ ++ T F+ + A+ G Sbjct: 105 MTLPDLAWLNTIP--VIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQ-AAHIG 161 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 F+ +C M++ Y G ++Q + L + + IR+ LG Sbjct: 162 R-FMVHC---ALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALG 217 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIF 276 + + A+ + ++ G ++GVP L V+ + ++ G P+ A+ I+L G+ Sbjct: 218 VVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAI-IWLYWTGDTT 276 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T L +W + + +D +RP L+ LP + G++GG Sbjct: 277 WGTVLLVWSGV-VGTLDNVIRPMLIRMGADLPLILILSGVIGG 318 >gi|298674448|ref|YP_003726198.1| hypothetical protein Metev_0489 [Methanohalobium evestigatum Z-7303] gi|298287436|gb|ADI73402.1| protein of unknown function UPF0118 [Methanohalobium evestigatum Z-7303] Length = 361 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 77/363 (21%), Positives = 161/363 (44%), Gaps = 34/363 (9%) Query: 13 RWMIMFIILVSLYFLKGFF--APVLSALIIG----FTSWPIYSSFISKKEESSTFLAVIA 66 +W I+ I V+L+FL F P+ +I+G + S PIY K A++A Sbjct: 16 KWKIIAAIAVALFFLAIIFILRPLADGIILGLVFAYISRPIYLKLNKNKRVG----ALVA 71 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT-K 125 T+ ++ I L G+LE+ + ++ +V NQ+ + +S + G + E+ Sbjct: 72 TICIVIPIIFILGM----GILEIIQQITWIV-QNQNEV-----ISSLTGFINNVEIPDFL 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 H QS++ +S++ + I +A +IFL L+++ II +F DG ++ Sbjct: 122 HTGIEQSIQDISQSIIPILREIGIVSYAKDL-VIFL---LNLVISIIVCYFLLSDGNTLY 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q++ + + ++ + K++ F+G A+ ++ +++ G +AL Sbjct: 178 QKVLDITPSNYQKTFQNYVTELDKILGGIFIGNAYAALFVSIMSAIVFYVFGFSHILALS 237 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT-LRPFLVGG 303 + I A++P A + +++ I A FL +I +++ + +RP+L Sbjct: 238 ALIFIAAVVPLFAGYMVLLPLALLRYFNQGIEAALIFFLVASIVIYLPPELFMRPYLASL 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK-------ENKEKI 356 K+ L +GG G+ G F P+L+ + ++ + ++ +N +K Sbjct: 298 KSKVHPLLIMLAFIGGAFVGGIAGFFAAPILLGALIAAYRVYVSELRSYGYNLGQNTDKS 357 Query: 357 SSN 359 +N Sbjct: 358 ENN 360 >gi|302392163|ref|YP_003827983.1| hypothetical protein Acear_1408 [Acetohalobium arabaticum DSM 5501] gi|302204240|gb|ADL12918.1| protein of unknown function UPF0118 [Acetohalobium arabaticum DSM 5501] Length = 355 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 11/186 (5%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS-- 231 +F+F +D I L S K++ R + + + +T++G +I +LGS Sbjct: 176 VFYFLKDDHKIYYLLLSWFTEENKPQAKRMLREIDEAL-ATYIGTQLIV---AFILGSFM 231 Query: 232 --AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y L G+P+ +AL +I AI +++P P ++++ + N LF+ A+ Sbjct: 232 FVGYLLIGLPNSLALALIIAITSLVPILGPALGILPALFVALTTNFLMIVKLFIVLAVAQ 291 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG-LFIGPVLMALIAVIWKESIMA 348 ++ +RP + GG + + L F ++ + G+LG LF+ P+ + + +I E+ A Sbjct: 292 YLEGNLVRPIVQGGKLNIHPLVVLFLIIISILLFGVLGALFVVPIYVVVRIII--ENKTA 349 Query: 349 IKENKE 354 NK+ Sbjct: 350 FYSNKQ 355 >gi|149280338|ref|ZP_01886459.1| permease [Pedobacter sp. BAL39] gi|149228887|gb|EDM34285.1| permease [Pedobacter sp. BAL39] Length = 367 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 5/145 (3%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K+I I+ K I FL M I+ + VL WL V V LG+IT I +IP Sbjct: 191 KRIQYIIKKYITGLFLQMFIVTVLMIFVL----WLLNVKYAVLLGLITGIFNIIPYIGIF 246 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGG 319 + +S+ + L + + + +D L P +VG +K+ L F G+V G Sbjct: 247 TALLISVLITFATAGVAKVLLVIIAFVAVHALDGNILMPLVVGSKVKINALFAFIGIVVG 306 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G+F+ +A++ +I+ Sbjct: 307 EMVWGISGMFLCIPYLAMLKIIFDR 331 >gi|212223162|ref|YP_002306398.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus onnurineus NA1] gi|212008119|gb|ACJ15501.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus onnurineus NA1] Length = 348 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 26/234 (11%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY---RDGFS 183 L+ P ++L F++ +FIP+ + + + + I LF FY + S Sbjct: 98 LAQPLPSEVLD--FIRNFSGEFIPKLSEYLSKQAFSLPMYPLQLFIFLFTFYYALANSTS 155 Query: 184 ISQQLD-SLGE---HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL---A 236 I +Q+ SL E HL + +S+ + ++R+ L + + +G+++ + + + Sbjct: 156 IIEQIQLSLPEKNRHLGEEILQSVSKTLGALVRAWLL----LNVAKGVLMTFGFIIFDVS 211 Query: 237 GVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-- 292 + + + G +T + + +P G I A + Y +G +A + L+G F+V Sbjct: 212 DIYTAIVAGFLTFLFSFVPLFEGWMIWLIAAA-YFAKEGMYLHAAGISLYG---FFLVSP 267 Query: 293 --DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D +RP +V L F G+VGG MG+ GL IGP+++ L+ + KE Sbjct: 268 MPDYIIRPLIVAKDTDLNETLVFIGMVGGTWAMGIKGLIIGPIVLNLLLTLLKE 321 >gi|153832787|ref|ZP_01985454.1| hipothetical membrane protein [Vibrio harveyi HY01] gi|148870921|gb|EDL69811.1| hipothetical membrane protein [Vibrio harveyi HY01] Length = 373 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 26/202 (12%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFY-----RDGFS-ISQQL-DSLGEHLFPAYW 200 F+ + AS G + + II +IA F + GF+ ++ +L + GE L Sbjct: 150 FLSQAASIVGSVSGGFIQFIISTMIAGAFMSNAEVCQKGFTKLADRLTNKKGEALIDLSK 209 Query: 201 KKISRIVPKVI-----RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +V VI +S G+ ++A+G V +A W+ V +A+ + I+A+IP Sbjct: 210 STVRSVVQGVIGVALIQSVMAGVGMVAVG---VPAAALWMVAVI-LIAIVQLPPILALIP 265 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 IY+ + A +W I + D L+P L+ P L T G Sbjct: 266 A---------IIYVFSVESTLVAGIFLVW-CILVSASDAVLKPVLLSRGSDTPMLVTLLG 315 Query: 316 LVGGVRTMGLLGLFIGPVLMAL 337 +GG+ G++GLF+G V+++L Sbjct: 316 ALGGMAMSGIVGLFVGAVVLSL 337 >gi|237718220|ref|ZP_04548701.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452404|gb|EEO58195.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 360 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 34/345 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ ++LSE + Sbjct: 91 ISEIGRMNDLLVTY-LTNGAGNNVPKNLS---------EFIHENIDLQALNRVLSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I +++ E HL P Sbjct: 141 AAIKDTVPRVWT-----LLAESLNILFSILASFIILLYVIFILLDYEAIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I F + ++K I A L ++ +++ I D L P ++G L Sbjct: 256 YLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQI-IQDTFLVPKIMGKITGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L MG+LG+ I L L+ ++ I+ ++NK Sbjct: 315 PAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEKNK 359 >gi|50085703|ref|YP_047213.1| PerM family permease [Acinetobacter sp. ADP1] gi|49531679|emb|CAG69391.1| putative permease (PerM family) [Acinetobacter sp. ADP1] Length = 396 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 52/278 (18%) Query: 111 SDIPGGM-WASEL---WTKHLSHPQSLKILSET-------FLKTN-GIDFIPRFASRF-- 156 IP G+ W + W H + + ++I ++ +++TN D I A R Sbjct: 91 DSIPSGIHWVNATFLPWVSHTFNVERMEIDTDQISTVVMEYIQTNYSADSIQTMALRLAQ 150 Query: 157 -GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV----- 210 G+ F+ +I+ + I F+F D + L+SL + Y + RIV + Sbjct: 151 SGLNFIQIGGTIVLIPIISFYFLLDW---DRMLNSLRRLIPRPYEESTLRIVYECHSVLG 207 Query: 211 --IRSTFL-----------GMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAMIP 255 ++ FL G+ +I + GL++G LA + ++ A+G+I A++A + Sbjct: 208 AFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVIATV- 266 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 F + L + G +F + A+E +I L+PFL+G I L + F Sbjct: 267 ----FQFGVDWMQLALVGVVF-----MIGQAVEGYI----LQPFLLGDKIGLSPVAVVFA 313 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G + G LG+ I + A+I V+ + A + + Sbjct: 314 VLAGAQLAGFLGMLIALPVAAVIVVLLRHLREAYEHTQ 351 >gi|169350364|ref|ZP_02867302.1| hypothetical protein CLOSPI_01131 [Clostridium spiroforme DSM 1552] gi|169293147|gb|EDS75280.1| hypothetical protein CLOSPI_01131 [Clostridium spiroforme DSM 1552] Length = 361 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 13/195 (6%) Query: 167 IIFMIIALFFFYRDGF-SISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 II++I+A++ + F SI Q + ++ + P Y K+I + + +++ F+G A Sbjct: 175 IIYVILAIYM--SNIFNSIRQTIKNIAIKIDCNLPIYLKEIDLSLVQYVKAFFIG----A 228 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 I + + Y L G P+ + LGV++ + ++IP PI + + + L Sbjct: 229 IAQAITTMIMYVLIGHPNWLILGVVSGVSSIIPYVGPIIANCLGLITSLGMQSSTIIFLC 288 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I+ ++ + P + I L L FG++ G G++G+ I L+ I +I+ Sbjct: 289 ILIFIQSIVMSYIITPRIYSSRIDLSILWVLFGILSGSSLFGIVGMIIAMPLLVSIKIIY 348 Query: 343 KESIMAIKENKEKIS 357 + + + +++K+S Sbjct: 349 Q---VYKEHHQDKLS 360 >gi|169830798|ref|YP_001716780.1| hypothetical protein Daud_0614 [Candidatus Desulforudis audaxviator MP104C] gi|169637642|gb|ACA59148.1| protein of unknown function UPF0118 [Candidatus Desulforudis audaxviator MP104C] Length = 358 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 18/196 (9%) Query: 167 IIFMI--IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK-----VIRSTFLGMT 219 ++ MI +A +FF RD +++L P W S ++ + IR Sbjct: 170 VVLMITFVATYFFSRD----NEKLREAWIRAIPEPWGARSLLIVREGFGAFIRFFRAQFV 225 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNA 278 +++I + + + + GVP V++G++T I ++P P + F + ++ G+ A Sbjct: 226 LVSITTAITI-TGLLIIGVPYAVSIGIVTGIFDLLPILGPTTIFVPWIAWCVLTGSYSLA 284 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 LF+ AI LF V +L +V + + L + G++ MG+LGL +GP+L+ Sbjct: 285 LKLFVLYAI-LFTVRASLEAKVVSMNLGIHPLAVLVAMYIGLKVMGILGLILGPILV--- 340 Query: 339 AVIWKESIMAIKENKE 354 V+ + +I A K +E Sbjct: 341 -VVVQGAIKAGKRARE 355 >gi|207091774|ref|ZP_03239561.1| membrane protein [Helicobacter pylori HPKX_438_AG0C1] Length = 323 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 156 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 213 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L GN+ A + L+ + + ++D ++P L+ +K+ Sbjct: 214 ALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 273 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 274 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 319 >gi|325689380|gb|EGD31385.1| permease [Streptococcus sanguinis SK115] Length = 360 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 15/254 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + + P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVMLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKE 354 + +E ++ +E K Sbjct: 347 LVREFVVEKEEKKR 360 >gi|317010786|gb|ADU84533.1| hypothetical protein HPSA_02620 [Helicobacter pylori SouthAfrica7] Length = 360 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 15/166 (9%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KK+ V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 193 KKVFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 250 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L G++ A + L+ + + ++D L+P+L+ +K+ Sbjct: 251 ALIWIPIAIYELYHGSVNGAIFIALYSILLISVLIDSVLKPYLIVFIKKRIFKTTLKINE 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--ESIMAIKENK 353 + FF ++ G+ G G+ +GP + A + + E+ KE + Sbjct: 311 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQE 356 >gi|56963356|ref|YP_175087.1| transporter [Bacillus clausii KSM-K16] gi|56909599|dbj|BAD64126.1| transporter [Bacillus clausii KSM-K16] Length = 358 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 31/231 (13%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S+KI E+F K G+D I + R F+ + + + F++ F+ +D + L + Sbjct: 141 SVKI--ESFAKA-GLDQIEQVIIRMLQSFMTWIV-VPFLV---FYLLKD----YELLKRV 189 Query: 192 GEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L P W+K + V + S G ++A G++ A W+ GVP + LG Sbjct: 190 AFYLTPRKWRKGLTAYANDVDRTFGSYVRGQLLVAFCVGVLSTVALWILGVPYPIVLGFF 249 Query: 248 TAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT----LRPFLV 301 IP G + AV LL +T L L+ I L I+ + L P +V Sbjct: 250 VGATDFIPYFGAIIGAIPAVGAALL------ESTTLGLYTVIALVIIQQIEGNLLSPVIV 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G + L + L+ GV G++GL I +A I K +++ I+++ Sbjct: 304 GRTVHLHPMIIIIALLIGVEAGGIVGLLIA----VPVAAILKVTVVHIRQS 350 >gi|254422704|ref|ZP_05036422.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190193|gb|EDX85157.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 353 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 12/136 (8%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 ++I+ V F G +++I G+ + L GVP L VI + +IPG GA Sbjct: 192 RRITETVQDSFLGFFWGRLLLSIFFGVSTFVVFLLLGVPYAPTLAVIAGVFDLIPGIGAT 251 Query: 260 ISFTAVSIYLLIKGNIFNAT-----CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + + +S++LL + +I AT C+ L E ++ + ++ L P+ + FF Sbjct: 252 LGVSLISLFLLSQ-SILLATQSIVICVVLQQVEENLLLPRIMKDSLNINPVVM-----FF 305 Query: 315 GLVGGVRTMGLLGLFI 330 L+ G R G+LG+F+ Sbjct: 306 ALIVGARIAGVLGIFL 321 >gi|306833219|ref|ZP_07466348.1| membrane protein [Streptococcus bovis ATCC 700338] gi|304424586|gb|EFM27723.1| membrane protein [Streptococcus bovis ATCC 700338] Length = 395 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 13/212 (6%) Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +E+F K N ID+ FAS + ++II LF+F RD + + L + L Sbjct: 164 AESFSK-NAIDWASNFASAIARV----TVAIIMSPFILFYFLRDS---GKMKEGLLKTLP 215 Query: 197 PAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ISR+ + K + G +AI G++ + + G+ G+I + M Sbjct: 216 TRMRRPISRVLGDINKQLAGYVQGQVTVAIVVGIIFTIFFNIIGLRYAATFGIIAGFLNM 275 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G+ ++ V I +++G I L + IE I + + P ++G + + + Sbjct: 276 IPYLGSFLAMVPVVIMGVVQGPIMLIKVLIAF-VIEQTIEGRFVSPLVLGSKLSIHPITI 334 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ G+ G+F+G + A I V+ KE Sbjct: 335 MFILLTSGAMFGVWGVFLGIPIYASIKVVVKE 366 >gi|302877845|ref|YP_003846409.1| hypothetical protein Galf_0603 [Gallionella capsiferriformans ES-2] gi|302580634|gb|ADL54645.1| protein of unknown function UPF0118 [Gallionella capsiferriformans ES-2] Length = 352 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 29/216 (13%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 LSH QS ++E L P +S G I L+ ++++ + +A+F+F RDG +S Sbjct: 128 LSHWQSAGGVAEKLL--------PWLSSSGGKI-LNVAMNLLLIPVAMFYFLRDGGLMSA 178 Query: 187 QLDSLGEHLFPAYWK--------KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + D+ L P +W ++ R++ + +R M +++ LVL W G+ Sbjct: 179 KFDA----LIPRHWHAKVCEISAEVDRVLAEFLRGQISVMLLMSAFYSLVL----WAVGL 230 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTL 296 + +G++ ++ IP G I ++ +++ + + + +++WG +++ TL Sbjct: 231 EFALPIGIVAGMLVFIPYLGMVIGLLLATLAAVMQFSELS-SVVWVWGVFGAGQMLEGTL 289 Query: 297 -RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 P+LVG I L L F L+ + G G+ + Sbjct: 290 VTPWLVGERIGLHPLAVIFALLAFGQLFGFFGVLLA 325 >gi|29347686|ref|NP_811189.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] gi|29339587|gb|AAO77383.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 377 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 81/351 (23%), Positives = 141/351 (40%), Gaps = 38/351 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ L V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCSLFLITLVGVSLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ +ILSE + Sbjct: 91 ISEIGRMNDLLV-TYLTNGAGNNVPKNLS---------EFIHENIDLQALNRILSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I + + E HL P Sbjct: 141 AAIKDTVPRVWA-----LLAESLNILFSILASFIILLYVIFILLDYEVIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I F + ++K I A L ++ +++ I D L P ++G L Sbjct: 256 YLQIIGFLPTVLLAILKAADTGENFWIIIACALAVFAIVQI-IQDTFLVPKIMGKITGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ NKE+I + Sbjct: 315 PAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKERIKYD 361 >gi|239828018|ref|YP_002950642.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] gi|239808311|gb|ACS25376.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] Length = 372 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 79/346 (22%), Positives = 148/346 (42%), Gaps = 34/346 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +LY++ P + A I F P+ F+ K + +LAVI T+ V+ + L+ L Sbjct: 25 ALYYVSTVTYPFIIAFFIAFLINPLVD-FLETKTKMPRWLAVIVTLIVLFAIVAGLVTLL 83 Query: 83 YYGMLEMKELVSKVVLAN-------------QHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + ++ VV N Q IP+ L+ + + AS+ T +++ Sbjct: 84 IAEIVSGTQYLANVVPENFQKLITYMETLVAQQIIPLYNDLAVLFKNLDASQQDTI-INN 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFL---DYCLSIIFMIIALFFFYRDGFSISQ 186 Q++ T + T FI ++ + IF ++A FF +D + Sbjct: 143 IQAVG----TQIATTVGQFIQHVLQNIPLLLAWLPNAATVFIFSLLATFFISKDWY---- 194 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM-----TIIAIGEGLVLGSAYWLAGVPSH 241 +L + + + PA +K + V ++ G T+I+I +VL L V Sbjct: 195 RLTGIAQKILPAKARKSGKTVFLDLKKALFGFIKAQATLISITTVIVLIGLLILR-VNYA 253 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + +I I+ ++P G I F IY + G++ A L + I + + + + P + Sbjct: 254 ITIALIIGIVDILPYLGTGIVFVPWIIYAAVSGDVPFAIGLGVL-YIVVLVQRQIMEPKV 312 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I L L T L G + +G LGL IGPV + +I + ++ Sbjct: 313 LSSSIGLDPLATLVALFVGFKLIGFLGLIIGPVTLVIIRTLHSANV 358 >gi|239826942|ref|YP_002949566.1| hypothetical protein GWCH70_1491 [Geobacillus sp. WCH70] gi|239807235|gb|ACS24300.1| protein of unknown function UPF0118 [Geobacillus sp. WCH70] Length = 340 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 27/223 (12%) Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS-------QQLDSLGEHLFP 197 G+ ++ ++ S I L L+ +I++LFF IS ++ S + L Sbjct: 131 GMTYLIKYFSDISSIGLQILLA---LILSLFFLLEKERIISFTNRFKYSKISSFYDEL-E 186 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + KK +R KVI + F +IA ++ + W+ G P LG++ + +IP Sbjct: 187 YFGKKFARTFGKVIEAQF----VIATINMIITVACLWMMGFPQLFGLGILIFFLGLIPVA 242 Query: 258 A------PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P+ F A SI G + + + A+ + L P L+ LP Sbjct: 243 GVIISLFPLCFIAYSI-----GGVMKVVYVLIMIAVVHALEAYVLNPKLMSSKTNLPVFY 297 Query: 312 TFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 TF L+ G+ GL +G PV + ++ V+ +++ ++++ Sbjct: 298 TFIVLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDE 340 >gi|89514122|gb|ABD74918.1| hypothetical protein [Sinorhizobium fredii] Length = 122 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 58/99 (58%) Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + G +T +++ +P P+ + +V++ L I+G ++ + + WG + + +D + P Sbjct: 1 PQALLFGFLTFVLSFVPIDPPLVWGSVALGLFIRGAVWWSFFVAAWGLLLVSSIDNVIGP 60 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +++G P L FFG +GGV G +G+F+GP L+A+ Sbjct: 61 YVLGKTDNRPVLLGFFGFLGGVVAFGFIGIFLGPTLLAV 99 >gi|152977617|ref|YP_001377134.1| hypothetical protein Bcer98_3955 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026369|gb|ABS24139.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 347 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 6/162 (3%) Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + KK +R KVI + FL IAI ++ A W+ G P + L ++ ++ +IP G Sbjct: 190 FGKKFARSFGKVIEAQFL----IAIVNCVLSVIALWILGFPQLLGLSLMIFLLGLIPVAG 245 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 IS + + G+I + + A+ + L P + LP TF L+ Sbjct: 246 VIISLFPLCMIAYNIGSITYVIYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLI 305 Query: 318 GGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 +G+ GL IG PV M L+ V+ S K EKI S Sbjct: 306 FSEHFLGVWGLIIGIPVFMFLLDVLDVTSDEIEKGANEKIES 347 >gi|15895697|ref|NP_349046.1| permease [Clostridium acetobutylicum ATCC 824] gi|15025448|gb|AAK80386.1|AE007743_8 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509847|gb|ADZ21483.1| permease [Clostridium acetobutylicum EA 2018] Length = 339 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 31/213 (14%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ--------QLDSLGEHL 195 G+ +I FA FG + L+ L+ +++LFF G +I + +L ++ E+ Sbjct: 136 QGLSYIIEFAKNFGKVSLNLFLA---FVLSLFFVLEKG-TIKKFGKKFEKSKLSTMYEY- 190 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F Y KVI++ L IAI ++ A + G P+ + LG + ++++IP Sbjct: 191 FVYYGNNFLNSFGKVIKAQIL----IAIVNAVLSSIALAIMGFPNLMTLGFMIFVLSLIP 246 Query: 256 GG------APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT-LRPFLVGGPIKLP 308 P+SF A +I N F + + + ++ L P L+ KLP Sbjct: 247 VAGVIISLVPLSFIAFNI------NGFTEVIYVILMVVVIHCIESYFLNPKLMSSKTKLP 300 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 TF L+ MG GL +G P+ M L+ V Sbjct: 301 IFFTFIILIVSGDFMGTWGLLLGIPLFMFLLDV 333 >gi|206579747|ref|YP_002240299.1| hypothetical protein KPK_4500 [Klebsiella pneumoniae 342] gi|288937004|ref|YP_003441063.1| hypothetical protein Kvar_4154 [Klebsiella variicola At-22] gi|206568805|gb|ACI10581.1| putative membrane protein [Klebsiella pneumoniae 342] gi|288891713|gb|ADC60031.1| conserved hypothetical protein [Klebsiella variicola At-22] Length = 366 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 19/146 (13%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ IR+ G+ +A+ + L++G +A +P A+G+ I+A+I G A + Sbjct: 210 TLTRLCTSTIRAVAQGVIGVALIQALLVGVIMLMASIP---AVGIFF-ILALILGIAQVP 265 Query: 262 F---TAVSIYLL-------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 TA +I L+ +IF L + G + D L+P L+G + P Sbjct: 266 VILVTAPAIALMWSLGTHSTGMDIFYTILLIVAG-----MADNVLKPLLLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ + G+LG+F+G L+A+ Sbjct: 321 VLLGALGGMASNGILGMFLGATLLAI 346 >gi|89890618|ref|ZP_01202128.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] gi|89517533|gb|EAS20190.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] Length = 340 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 +++S +G+ ++A+ +G+V Y++ GV + VIT I +MIP G + V+I Sbjct: 192 DLVKSNAIGIPLVALLQGIVALIGYFIFGVENPFFWFVITVIGSMIPFVGTALGILPVTI 251 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L +G A + ++G I + D R + + L T G+V GV G +G Sbjct: 252 LLFSQGETAAAIGILIYGVIVVGSTDNLFRLVVQKRLADVHPLVTLIGVVVGVPLFGFIG 311 Query: 328 LFIGP 332 L GP Sbjct: 312 LIFGP 316 >gi|307637250|gb|ADN79700.1| acid membrane antigen A [Helicobacter pylori 908] gi|325995842|gb|ADZ51247.1| Acid membrane antigen A [Helicobacter pylori 2018] gi|325997436|gb|ADZ49644.1| putative membrane protein [Helicobacter pylori 2017] Length = 349 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 15/166 (9%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L G++ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK--ESIMAIKENK 353 + FF ++ G+ G G+ +GP + A + + E+ KE K Sbjct: 300 ILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|256370809|ref|YP_003108634.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] gi|256009601|gb|ACU52961.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] Length = 497 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%) Query: 110 LSDIPGGMWASELWTKH--LSHPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYC 164 L IPGG A T H L+ P L+I +E FLK G++ + F+ F +D Sbjct: 206 LQSIPGGAIARPFITHHNALNIPLYLRISNELFLKKLIVGGLESVYEFSRNFRNEGIDKN 265 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHL-FPAYWKKISRIVPKVI--RSTFLGMTII 221 + F I+ L+ Y+D F + ++ L E+L Y KK+ +I K+I ++ F +TI+ Sbjct: 266 HNPEFTILELYVSYKDYFWMMNFIEKLLEYLCIKLYNKKLLKINNKLISFKTPFKKITIL 325 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + L+G+ + + I Sbjct: 326 ---DSIKENTGFDLSGLNEKNIRNICKKLQLKIDKN 358 >gi|75908944|ref|YP_323240.1| hypothetical protein Ava_2732 [Anabaena variabilis ATCC 29413] gi|75702669|gb|ABA22345.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 345 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 23/178 (12%) Query: 192 GEHLFPAYWKKISRIVPK--------VIRSTFLGMTIIAIGEGLVLGSA----YWLAGVP 239 GE L W +I+P+ ++R +FLG + L L S+ + L VP Sbjct: 178 GEKL----WNFTLKIIPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVP 233 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L VI I+ +IPG GA + +++ +L +++ A + + + I D + P Sbjct: 234 FALILSVIVGILDIIPGIGATLGVGTITLIVL-SQDVWLALKVLVACVVLQQIQDNLISP 292 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++ G + L + FF L+ G R GLLG+FI + +I S+ I E K ++ Sbjct: 293 RIMQGALNLNPVVVFFALLVGARVAGLLGVFISIPITGVIV-----SLFEIDEMKSEV 345 >gi|313125203|ref|YP_004035467.1| permease [Halogeometricum borinquense DSM 11551] gi|312291568|gb|ADQ66028.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 396 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 88/387 (22%), Positives = 158/387 (40%), Gaps = 58/387 (14%) Query: 14 WMIMFIILVSLYFL-KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 W++ I V L F+ F + L + + + P+YS + + S + A V+++ Sbjct: 17 WVLGVAIFVVLAFVADAFLGTFMLGLFLYYATRPVYSRIRGRIGQPS----IGAAVALLV 72 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWASELWTKHLSHP 130 L + +L + Y ++ ++EL S V NQ GI + +L SEL L +P Sbjct: 73 LSLPVVLLVNYTVLIAVQEL-SAFVGQNQQGILAALKPYLGSFESLQAPSELLATLLENP 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ-QLD 189 L +++T + I AS LD + F+ RD +S + Sbjct: 132 SELVDMTDTATVEAVLSSIAGTAS----FILDAAFQLFIAFAFAFYLLRDDRRLSAWTRE 187 Query: 190 SLGEH--LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VP 239 +L H + AY + R +R+ + G + A ++ +Y +P Sbjct: 188 NLSGHGGVMDAYMTAVDRD----LRTIYFGNILNAFAIAVIAAVSYNAINLFAPPSLWIP 243 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL---WGAIELFIVDKT 295 S LG +T ++IP G I + V++ L ++ + ++ +GA+ L +VD Sbjct: 244 SPTLLGALTGAASLIPVVGMKIVYVPVTVLLAVEAALTAPDAFWVALAYGAVSLVVVDTI 303 Query: 296 ----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW--------- 342 LRP++ G L F + G G GLF+GP+L+ +IAV + Sbjct: 304 PDFLLRPYVSGR--NLHTGTVMFAYIIGPALFGWYGLFLGPLLL-VIAVHFVRIVLPELV 360 Query: 343 -----------KESIMAIKENKEKISS 358 + + AI + ++KIS Sbjct: 361 TGEPLKPDARGRNPLSAIDDEQQKISD 387 >gi|229827713|ref|ZP_04453782.1| hypothetical protein GCWU000182_03102 [Abiotrophia defectiva ATCC 49176] gi|229787912|gb|EEP24026.1| hypothetical protein GCWU000182_03102 [Abiotrophia defectiva ATCC 49176] Length = 385 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/168 (20%), Positives = 78/168 (46%), Gaps = 12/168 (7%) Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL----AGVPSHVALGVITAIM 251 F +W++ + I+ + ++ II +G+++G A ++ AG+P V + ++ + Sbjct: 219 FAGFWERCNSILIR-----YIAFDII---DGIIVGVANFIFMSIAGIPYSVLISLVVGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + P PI + ++L+ N +A ++ I I L+P L GG + +P + Sbjct: 271 NLAPTFGPIVGAIIGGFVLVLVNPLHALWFIIFTIILQTIDGYVLKPKLFGGSLGVPGVW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ G R +G+ G+ + A++ I+ + I +E++ Sbjct: 331 ILISIIVGSRILGVTGILLAIPFAAIVDFIYHDLIFQGARKREELEKQ 378 >gi|332171189|gb|AEE20444.1| protein of unknown function UPF0118 [Krokinobacter diaphorus 4H-3-7-5] Length = 345 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 4/158 (2%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 K I + +++S +G+ ++A+ +G V + + GV I + +MIP G Sbjct: 184 KLIGKDSVDLVKSNAIGIPLVALLQGAVALIGFLILGVEDPFFWFAIVTVGSMIPFVGTA 243 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + V I L G+++ + L L+G I + D R + + L T G++ G Sbjct: 244 LGVIPVCIILYAAGDVWQSIVLALYGIIVVGSTDNLFRLVIQKRLADVHPLVTIIGVIVG 303 Query: 320 VRTMGLLGLFIGPVLMA---LIAVIWKESIMAIKENKE 354 V G +GL GP++++ LI I+K NKE Sbjct: 304 VPLFGFIGLIFGPIVVSIFLLIVKIYKHEYGKEISNKE 341 >gi|326800764|ref|YP_004318583.1| hypothetical protein Sph21_3375 [Sphingobacterium sp. 21] gi|326551528|gb|ADZ79913.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 372 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 14/164 (8%) Query: 188 LDSLGEHLFPAYWK---KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++S E+ P ++ +I I+ + + FL M I+ I L A++ GV L Sbjct: 178 VNSFKENHSPVVYEIVYQIQYIIKRYVVGLFLQMLIVTILACL----AFYFIGVKYSFLL 233 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT----LRPFL 300 G+IT I +IP FTA+ I +LI AT + L+ I L ++ + P + Sbjct: 234 GLITGIFNIIPYVGI--FTALVITVLITFATSTATNV-LFVVIALVVIHAVDGNYIMPKI 290 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG +++ L GLV G G+ G+F+ ++A++ V++ Sbjct: 291 VGSKVQINTLIALIGLVLGEMLWGITGMFLSIPIIAIMKVVFDR 334 >gi|300867990|ref|ZP_07112629.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334011|emb|CBN57807.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 402 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 11/168 (6%) Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +SL E L P + K S + ++ F G IIA L SA+ VP + G+ Sbjct: 204 ESLIEWLPPRFQKPFSETLRLSFQNYFTGQLIIATCMAFGLTSAFIFLKVPFGLLFGLTI 263 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF---IVDKTLRPFLVGGPI 305 +MA++P G + V+I + ++ L A+EL IV+ + P ++G Sbjct: 264 GLMALVPFGGSVGIGLVTILVALQNIGLGLQVL----AVELIVQQIVENLIAPRVLGSVT 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F ++ G R G F+G V+ AV+ KE++ A++ K Sbjct: 320 GLNPFWVFVSILTGARVGG----FLGVVIAVPAAVVIKEALAAVRSEK 363 >gi|326424274|ref|NP_762641.2| putative permease [Vibrio vulnificus CMCP6] gi|319999660|gb|AAO07631.2| Predicted permease [Vibrio vulnificus CMCP6] Length = 360 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI--PGGAP 259 + ++ +R +G+ IA ++ G+ LAGVP+ +I + A++ P Sbjct: 209 SLHKLTTATLRQVAVGIIGIAFLTAMIFGAIVALAGVPAASLFTLIALVFAIVQLPVTVV 268 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ G NA L I +D L+P ++G + +P G VGG Sbjct: 269 ALVAVAVLWSGDSGTAHNAIFTVL--IIAASFIDNFLKPIILGRGLDVPMPIILIGAVGG 326 Query: 320 VRTMGLLGLFIGPVLMA 336 V + G+LG+F+G +A Sbjct: 327 VMSGGILGMFVGAAFLA 343 >gi|229062085|ref|ZP_04199410.1| hypothetical protein bcere0026_41570 [Bacillus cereus AH603] gi|228717237|gb|EEL68912.1| hypothetical protein bcere0026_41570 [Bacillus cereus AH603] Length = 361 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGIMIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + F L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMFALLVGGEVAGIVGLLISVPILAVIRTV 348 >gi|269959791|ref|ZP_06174170.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835545|gb|EEZ89625.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 373 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 4/191 (2%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F+ + AS G + + II +IA F + + L + L + + + Sbjct: 150 FLSQAASIVGSVSGGFIQFIISTMIA-GAFMSNAEVCQKGFTKLADRLTNKKGEALIDLS 208 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI-SFTAVS 266 +RS G+ +A+ + ++ G GVP+ AL ++ I+ I PI Sbjct: 209 KSTVRSVVQGVIGVALIQSVMAGVGMVAVGVPAA-ALWMVAVILIAIVQLPPILXLIPAI 267 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 IY+ + A +W I + D L+P L+ P L T G +GG+ G++ Sbjct: 268 IYVFSVESTLVAGIFLVW-CILVSASDAVLKPVLLSRGSDTPMLVTLLGALGGMAMSGIV 326 Query: 327 GLFIGPVLMAL 337 GLF+G V+++L Sbjct: 327 GLFVGAVVLSL 337 >gi|325693704|gb|EGD35623.1| permease [Streptococcus sanguinis SK150] Length = 366 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 15/259 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAIYLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + + P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVMLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ ++L I + P +VG + LP L T + G GL+G+ + A+I Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYR 346 Query: 341 IWKESIMAIKENKEKISSN 359 + +E ++ +E K + S++ Sbjct: 347 LVREFVVEKEEKKAEGSAS 365 >gi|254410689|ref|ZP_05024468.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196182895|gb|EDX77880.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 367 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 8/195 (4%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L ++ +II+ F+ + G + + SL E L + S + ++ F+G IIA Sbjct: 169 VLDVLLIIISTFYLLQHGREVWR---SLIEWLPNKVQRSASNTLRLSFQNYFIGQIIIAT 225 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 L S + L VP + G +MA++P G + V++ + ++ L + Sbjct: 226 CMASGLISLFILLKVPFGLLFGFTIGVMALVPFGGSVGIALVTLLVALRDIGLGVQVLAV 285 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +V+ L P + G L F L+ GVR GLLG+ + AV+ K Sbjct: 286 -AVVFQQLVENLLAPRIFGRVTGLNPFWVFISLLIGVRVGGLLGVIVA----VPTAVVIK 340 Query: 344 ESIMAIKENKEKISS 358 E+++ +++ ++ ++ Sbjct: 341 EALVEVRKARKDRNT 355 >gi|73670231|ref|YP_306246.1| hypothetical protein Mbar_A2764 [Methanosarcina barkeri str. Fusaro] gi|72397393|gb|AAZ71666.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 346 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 K++R+T + +A+ +G +L + + + G I AI++ +P GAP + +I Sbjct: 201 KIVRTTLIASGAVALVQGGILTIVFVIFNIQGAFLWGFIAAILSFLPVVGAPFIWVPATI 260 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG--GPIKLPFLPTFFGLVGGVRTMGL 325 + + + A L I + ++D LRP + G I PFL + G+V GV GL Sbjct: 261 VQFFQKD-YTAAIAILAAGIFISVIDNFLRPIIQKRVGEIH-PFL-SLLGVVIGVSLFGL 317 Query: 326 LGLFIGPVLMA 336 LG+ IGP+L++ Sbjct: 318 LGIVIGPLLLS 328 >gi|254481333|ref|ZP_05094578.1| hypothetical protein GPB2148_1806 [marine gamma proteobacterium HTCC2148] gi|214038496|gb|EEB79158.1| hypothetical protein GPB2148_1806 [marine gamma proteobacterium HTCC2148] Length = 337 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 5/163 (3%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P K+ + RS +G+ +A+ + +++G + L GVP+ L +I ++A++ Sbjct: 169 PEQGPKMHNLATMTTRSVAVGVLGVAVIQAVLMGLIFILIGVPAAGLLALIIMMLAIVQ- 227 Query: 257 GAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTF 313 P + + + + G AT W + L + D L+P L+G + P Sbjct: 228 -LPAMLVGIPVIIWVWNGGDAGATMNTFWTVVILVSGLADNVLKPLLLGRGVDAPMPVIL 286 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G +GG+ + G +GLFIG V++A+ I+ + + +E E + Sbjct: 287 IGALGGMISAGFIGLFIGAVVLAVGYQIFMQWVAEHEEELETM 329 >gi|154252605|ref|YP_001413429.1| hypothetical protein Plav_2158 [Parvibaculum lavamentivorans DS-1] gi|154156555|gb|ABS63772.1| protein of unknown function UPF0118 [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 48/264 (18%), Positives = 103/264 (39%), Gaps = 32/264 (12%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ + + + + IL + Y + AP+ +A++ F P+ + F Sbjct: 31 RARIMRAETALAILAVLAILYTAYLAQNLVAPITAAVVGSFIFMPLM------RAAPLRF 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 L + S++ ++ L Y + E P W + IP + E Sbjct: 85 LPDALSASIIVATLIGALAGSVYLLAE----------------PAAEWTARIPAAIEEFE 128 Query: 122 LWTKHLSHP-QSLKILSETFLKTNGIDFIPR--------FASRFGMIFLDYCLSIIFMII 172 ++ LS P +++ S+ + D PR ++ + SI+ I+ Sbjct: 129 EKSRELSEPMAAMRRASKQVEEMTRADDAPREVVVRDEGLVAQAMEVAGQKGASILIFIV 188 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L+F G + ++ + L ++I R + + I + +++I G G+ +G Sbjct: 189 LLYFLLATGELLRDRIIRSAKRLTDKERARRILRSIEREISTYLFSISLINAGLGVAIGL 248 Query: 232 AYWLAGVPSHVALGVITAIMAMIP 255 + W G+P+ + G A++ IP Sbjct: 249 SMWAIGLPNALLWGFAAALLNFIP 272 >gi|307309747|ref|ZP_07589398.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306899849|gb|EFN30473.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 381 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F LF I L I+D ++P LV + P L G++GG + GL+GLF+GP+++ Sbjct: 290 FGMAALFTILLIPLLIIDNVMKPILVARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVL 349 Query: 336 ALIAVIWKESIMAIKENKEKISSN 359 ++ S++ I N + + S Sbjct: 350 SVF-----HSLLVIWMNTDTVGSE 368 >gi|57641097|ref|YP_183575.1| hypothetical protein TK1162 [Thermococcus kodakarensis KOD1] gi|57159421|dbj|BAD85351.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus kodakarensis KOD1] Length = 330 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 18/218 (8%) Query: 153 ASRFGMIFLDYCLSI----IFMIIALFFFYR---DGFSISQQLDSLGEHLFPAYWKKISR 205 + RF L Y S+ + +I+ +F FY + +I Q++ SL +K+ Sbjct: 118 SQRFNSYVLGYTYSLPTLLLQVIVTVFSFYGILVNADAIKQEVYSLIPPTNRDLARKLID 177 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLG---SAYWLAGVPSHVALGVITAIMAMIP--GGAPI 260 + + G ++ +G+G+++ + ++ V VA G++T ++ ++P GG + Sbjct: 178 SGAETLHIVLRGWLLVGVGKGILMALFFRVFGISDVGGAVAAGILTVVIELLPVVGGWIV 237 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V+ YL+ +G+I + L + G ++ + D LR + + + + G +GG Sbjct: 238 WVGGVA-YLINQGHILSGVLLAVLGFSLVSPLPDILLRDKISRLKWGVNAIISLLGFIGG 296 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G +G+ IGPV + L+ + +E KE KE+ S Sbjct: 297 YIAFGFVGIIIGPVSLGLLKTLVEEW----KEIKERTS 330 >gi|67923851|ref|ZP_00517311.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] gi|67854314|gb|EAM49613.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] Length = 354 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 31/47 (65%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +VD L+P L+ + +P + G++GG G+LGLFIGPV+++L Sbjct: 290 LVDNILKPILMSKGLPVPTIVILMGVLGGTLVHGILGLFIGPVILSL 336 >gi|325527775|gb|EGD05048.1| hypothetical protein B1M_08317 [Burkholderia sp. TJI49] Length = 36 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 16/31 (51%), Positives = 24/31 (77%) Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GG T GL+GLF+GP LM ++ ++W E Sbjct: 3 FGILGGAETFGLIGLFVGPALMTVLTMLWTE 33 >gi|312870325|ref|ZP_07730452.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094146|gb|EFQ52463.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 369 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 23/271 (8%) Query: 87 LEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELW----TKHLSHPQSLKILSETFL 141 L + EL+S V +L N H + R+++ E++ +HLS ++ K+LS F Sbjct: 99 LVIPELISCVQLLINNHSKVITRFITAFEHNSNLQEVFKQFDVRHLSWSKAEKVLSYGFS 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T + + AS +S+ I FFF + L L AY Sbjct: 159 GT--VKALMSTASS--------VVSVATTSIVAFFFSIYLLIYKEMLARQCTRLIDAYLG 208 Query: 202 KISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLA----GVPSHVALGVITAIMAMI 254 KI R + VIR+ + + +LG A ++ +P +GV+TAI A+I Sbjct: 209 KIKRPLMYVIRTFDNCYSNYIAGQCKDAAILGIACFIGMSILRMPYATMIGVVTAIGALI 268 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I ++ + L+ + A ++ + + ++ P +VG I LP + F Sbjct: 269 PIIGAILGASIGVVLIFAVSPLKAGIFLIFIIVLQQLDNRITYPLVVGKSIGLPSVWVFA 328 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVIWKE 344 ++ G G+LG+ + P+ AL +I + Sbjct: 329 AVIIGGSISGILGMMLTVPLFAALYQIIATD 359 >gi|297379768|gb|ADI34655.1| membrane protein [Helicobacter pylori v225d] Length = 349 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLG-SAYWLAGVPSHVALGVITAIMAMIPG-GA 258 KKI V ++R L I I EG+ G W +LG++ + +++P G Sbjct: 182 KKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFG--HDGWSLGILYGLASLVPAVGG 239 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV--------GGPIKLPF 309 + + ++IY L G++ A + L+ + + ++D ++P L+ +K+ Sbjct: 240 ALIWIPIAIYELYHGHVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINE 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 300 MLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|290509932|ref|ZP_06549302.1| hypothetical protein HMPREF0485_01702 [Klebsiella sp. 1_1_55] gi|289776648|gb|EFD84646.1| hypothetical protein HMPREF0485_01702 [Klebsiella sp. 1_1_55] Length = 366 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 19/146 (13%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ IR+ G+ +A+ + L++G +A +P A+G+ I+A+I G A + Sbjct: 210 TLTRLCTSTIRAVAQGVIGVALIQALLVGVIMLMASIP---AVGIFF-ILALILGIAQVP 265 Query: 262 F---TAVSIYLL-------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 TA +I L+ +IF + + G + D L+P L+G + P Sbjct: 266 VILVTAPAIALMWSLGTHSTGMDIFYTILMIVAG-----MADNVLKPLLLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ + G+LG+F+G L+A+ Sbjct: 321 VLLGALGGMASNGILGMFLGATLLAI 346 >gi|146321353|ref|YP_001201064.1| permease [Streptococcus suis 98HAH33] gi|145692159|gb|ABP92664.1| Predicted permease [Streptococcus suis 98HAH33] Length = 391 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 27/233 (11%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC-----------LSIIFMIIALFFF 177 P +L++L+ K N D I +A +F +++ ++I+ M LF+ Sbjct: 148 RPTALEMLN----KVN--DQIVAYAQKFSSSAVNWASNLISTASQIIVAILIMPFILFYL 201 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAY 233 RDG Q L+ P W++ I ++ V + + G +AI L+ + Sbjct: 202 LRDG----QYLNKHITQYLPTKWREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMF 257 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+ + LGV+ + +IP G+ ++ I LI G I L ++ IE I Sbjct: 258 SIIGLSYPITLGVMAGFLNLIPYLGSFLAMIPAVILGLIAGPIMLIKVLVVF-MIEQTIE 316 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + P ++G + + + F L+ + G+LG+F+G + A I V+ K + Sbjct: 317 GRFVTPLIIGSSLSIHPITILFVLLTAGQMYGVLGVFLGIPIYASIKVLVKAA 369 >gi|253572141|ref|ZP_04849545.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838321|gb|EES66408.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 377 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 81/351 (23%), Positives = 140/351 (39%), Gaps = 38/351 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ + ++ L V L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCALFLITLVGVSLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ +ILSE + Sbjct: 91 VSEIGRMNDLLVTY-LTNGAGNNVPKNLS---------EFIHENIDLQALNRILSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I + + E HL P Sbjct: 141 AAIKDTVPRVWA-----LLAESLNILFSILASFIILLYVIFILLDYEVIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I F + ++K I A L ++ +++ I D L P ++G L Sbjct: 256 YLQIIGFLPTVLLAILKAADTGENFWIIIACALAVFAIVQI-IQDTFLVPKIMGKITGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ NKE+I + Sbjct: 315 PAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKERIKYD 361 >gi|307352761|ref|YP_003893812.1| hypothetical protein Mpet_0600 [Methanoplanus petrolearius DSM 11571] gi|307155994|gb|ADN35374.1| protein of unknown function UPF0118 [Methanoplanus petrolearius DSM 11571] Length = 346 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 31/51 (60%) Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 D +RPFL+G K+ + F GG+ MG++G IGPV++AL+ ++ Sbjct: 277 DWWIRPFLMGKRTKISGVIMFIAFFGGIMAMGVVGFIIGPVIVALVIACYR 327 >gi|284037625|ref|YP_003387555.1| hypothetical protein Slin_2741 [Spirosoma linguale DSM 74] gi|283816918|gb|ADB38756.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 355 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 60/308 (19%), Positives = 124/308 (40%), Gaps = 30/308 (9%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y L G+ + L A I+ P +++ K+ + + + + + + + I+P L L Sbjct: 26 IYGLSGYISAFLGAGILYVVFRPWFTALAIKRHWNKSLVTTLLIIFSIVVIIMPFLTLSL 85 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 L+ ++ +QH + A EL ++ +++ + L+ Sbjct: 86 L-------LIDRIQYYSQHTEDILNLAKK------AEELTGYQITSQENI----QNLLRQ 128 Query: 144 NGIDFIPRFASRFGMIFLDYC--LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---A 198 G + R LD+ L ++F + F ++GF Q P Sbjct: 129 GG-SYASRLLPSLAGGALDFIVILGLMFFTMYFMFVQQEGFQAGLQ------KYLPFKKD 181 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 K++ + + + +G ++++ +G++ G+ W+ GVP + G + MA IP G Sbjct: 182 TQKELGESLKNNVNANVIGQALVSLVQGVLTGATLWIFGVPDALFWGTVAFFMAFIPVLG 241 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + + L +GN + + G + + +D LR L + L T G+V Sbjct: 242 TPLVWGPAGLIQLSQGNTSQGIGILVVGVVVIINIDNLLRIMLAKRMGDIHPLVTLAGIV 301 Query: 318 GGVRTMGL 325 GV G+ Sbjct: 302 LGVPIFGI 309 >gi|159026346|emb|CAO86435.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 22/153 (14%) Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 ++FL +++ I GL+L AG+ LGVI AI PG GA + V+I Sbjct: 210 TSFLSFSLLGIQYGLIL------AGI-----LGVIDAI----PGIGATLGILLVTILTFT 254 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + A F+ + + I D +RP ++G ++L + F L G R GLLG+F+ Sbjct: 255 SQGLTIAVKAFIVCVVLVQIQDNIIRPKVMGNALELNPVILFLSLFIGERIAGLLGVFLS 314 Query: 332 PVLMALIAVIW-----KESIMAIKENKEKISSN 359 + +IA IW ++ I ++EN+ K S Sbjct: 315 IPIAGMIA-IWISYGEEKPITDLEENQLKESQE 346 >gi|256419838|ref|YP_003120491.1| hypothetical protein Cpin_0792 [Chitinophaga pinensis DSM 2588] gi|256034746|gb|ACU58290.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 344 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 K++ + +G+ IA+ +G+V Y++ VP V +T AM+P GA + + + Sbjct: 192 KLVIANAVGIPAIALIQGVVSLIGYFIFQVPQPVFWFAVTCFTAMLPVVGAAAVYVPMGL 251 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YLL G + + ++G + D R L + L T FG++ GV G +G Sbjct: 252 YLLGTGMTWQGIGVLVYGFAVVGTSDNIFRFVLAKRIGDVHPLITVFGVLIGVNLFGFIG 311 Query: 328 LFIGPVLMAL 337 L GP+L+++ Sbjct: 312 LIFGPLLISM 321 >gi|224370368|ref|YP_002604532.1| putative sodium:dicarboxylate symporter permease [Desulfobacterium autotrophicum HRM2] gi|223693085|gb|ACN16368.1| putative sodium:dicarboxylate symporter permease [Desulfobacterium autotrophicum HRM2] Length = 358 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 +G + G A+ LAG+ V G I A+ ++IP G + + I L++ G L + Sbjct: 220 QGFICGLAFALAGIKGPVFWGSIMAVTSIIPAVGTALVWGPALIILVLMGKFTGVIILAV 279 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +D LRP LVG K+ L FG +GG+ Sbjct: 280 LCGVVAGNLDNVLRPRLVGKDTKMHDLFVLFGTLGGI 316 >gi|229169133|ref|ZP_04296848.1| hypothetical protein bcere0007_40850 [Bacillus cereus AH621] gi|228614361|gb|EEK71471.1| hypothetical protein bcere0007_40850 [Bacillus cereus AH621] Length = 361 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + F L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMFALLVGGEVAGIVGLLISVPILAVIRTV 348 >gi|237752007|ref|ZP_04582487.1| membrane protein [Helicobacter winghamensis ATCC BAA-430] gi|229376574|gb|EEO26665.1| membrane protein [Helicobacter winghamensis ATCC BAA-430] Length = 355 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 13/169 (7%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P K + V VI F I +G + G G S++ L V +++P Sbjct: 189 PTQTKSLYNEVSAVISVVFYSSIFSMILQGTLFGILMLFFGYNSYL-LAVFYGFASLVPV 247 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPI 305 GG+ + V Y L GN NA + L+ I + + D ++PF L+ P+ Sbjct: 248 VGGSLVWLPIVG-YELYLGNYTNAIVIALYSIIIIATLADNGIKPFIIAFINRVLIKTPV 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ + FF ++ G+ + G G+ +GP + AL + + + NK+ Sbjct: 307 QINEMLIFFAIIAGLTSFGFWGIVLGPAITALFIALLRIYQTLLNSNKD 355 >gi|289577289|ref|YP_003475916.1| sporulation integral membrane protein YtvI [Thermoanaerobacter italicus Ab9] gi|289527002|gb|ADD01354.1| sporulation integral membrane protein YtvI [Thermoanaerobacter italicus Ab9] Length = 354 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 35/250 (14%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMI 171 + T ++S P ++ L E+ + + +++I FA L++ + + + Sbjct: 115 VDRIRTYYISLPPNITSLIESNMHS-ILNYISLFAKNLATWLLNFATKLPNFFFMTLITL 173 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----------MTII 221 +A FF +D I LD + + P++W + ++ + + TF G +T + Sbjct: 174 VATFFISKDKNLI---LDFIKRQI-PSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFL 229 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFN 277 + GLV+ G LG+ I+ +P G I + +I ++IK + Sbjct: 230 EVSIGLVI------IGFDYPFLLGLFVTIVDALPVLGSGSVMIPWALYNI-IIIKNYMVG 282 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L L+ I + +V + + P +VG I L L T + GV+ G LGL IGPV + + Sbjct: 283 IYLLILY--ILVVVVRQMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVV 340 Query: 338 IAVIWKESIM 347 + + I+ Sbjct: 341 FKALQRAEII 350 >gi|229013608|ref|ZP_04170739.1| hypothetical protein bmyco0001_40160 [Bacillus mycoides DSM 2048] gi|229135213|ref|ZP_04264012.1| hypothetical protein bcere0014_41150 [Bacillus cereus BDRD-ST196] gi|228648255|gb|EEL04291.1| hypothetical protein bcere0014_41150 [Bacillus cereus BDRD-ST196] gi|228747667|gb|EEL97539.1| hypothetical protein bmyco0001_40160 [Bacillus mycoides DSM 2048] Length = 361 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + F L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMFALLVGGEVAGIVGLLISVPILAVIRTV 348 >gi|302389809|ref|YP_003825630.1| sporulation integral membrane protein YtvI [Thermosediminibacter oceani DSM 16646] gi|302200437|gb|ADL08007.1| sporulation integral membrane protein YtvI [Thermosediminibacter oceani DSM 16646] Length = 352 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 16/196 (8%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM-----TII 221 +IF ++ +FF +D I + + H F +KK+ I +++ S F+G+ T++ Sbjct: 165 LIFTFLSSYFFAKDKKRIMISIRKILPHNF---YKKLENIQLELLIS-FVGLIKAQITLV 220 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC 280 I L+ + +++ V + LG+I ++ ++P G I F +++ I GNI A Sbjct: 221 MIST-LITIAGFYILKVDYALTLGIICGVLDVLPIFGPSIIFIPWAVFSAIVGNIKFAIA 279 Query: 281 LFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L A+ L +V + L+ ++G + L + + G++ G LGLFIGP+++ ++ Sbjct: 280 LI---ALYLVVVGCRQVLQAKVIGTHLGLDPIVALISIYVGIKIFGFLGLFIGPLVVVIV 336 Query: 339 AVIWKESIMAIKENKE 354 + + ++ N+ Sbjct: 337 RAVIQSGLIPPLVNRT 352 >gi|229019819|ref|ZP_04176621.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1273] gi|229026045|ref|ZP_04182428.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1272] gi|228735261|gb|EEL85873.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1272] gi|228741490|gb|EEL91688.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1273] Length = 365 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI------RSTFLGMTI 220 ++F+++A FF D ++ ++ + Y K I + K + + T + MT Sbjct: 172 LVFILLATFFISYDWHHLAHKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 + + GL++ VP + + +IT ++ ++P G F IY+ G+ Sbjct: 232 VIVLIGLLI------LRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD----- 280 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+IV + + P ++ I L L T L G + G LGL IGPV + Sbjct: 281 TAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTL 340 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 341 VLLNTLHKAHV 351 >gi|152976977|ref|YP_001376494.1| sporulation integral membrane protein YtvI [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025729|gb|ABS23499.1| Sporulation integral membrane protein YtvI [Bacillus cytotoxicus NVH 391-98] Length = 372 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 22/191 (11%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV------IRSTFLGMTI 220 ++F+++A FF D ++ + + Y K I + K + T + MT Sbjct: 179 LVFILLATFFISFDWHRLAHKTRHFLPNRVHGYGKTIFVDLRKASFGFVKAQLTLVSMTT 238 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNAT 279 I + GL++ VP + + +IT I+ ++P G F IY+ G+ Sbjct: 239 IIVLVGLLI------LRVPYAITIALITGIVDLLPYLGTGAVFVPWVIYVFFTGD----- 287 Query: 280 CLFLWGAIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F G + L+I+ + + P ++ I L LPT L G + G LGL +GPV + Sbjct: 288 TAFAIGLLILYIIVIVQRQIMEPKVLSSNIGLDPLPTLVALFVGFKLYGFLGLIVGPVTL 347 Query: 336 ALIAVIWKESI 346 L+ + K + Sbjct: 348 VLLNTLHKAHV 358 >gi|300913741|ref|ZP_07131058.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X561] gi|300890426|gb|EFK85571.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X561] Length = 362 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 35/250 (14%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMI 171 + T ++S P ++ L E+ + + +++I FA L++ + + + Sbjct: 123 VDRIRTYYISLPPNITSLIESNMHS-ILNYISLFAKNLATWLLNFATKLPNFFFMTLITL 181 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----------MTII 221 +A FF +D I LD + + P++W + ++ + + TF G +T + Sbjct: 182 VATFFISKDKNLI---LDFIKRQI-PSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFL 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFN 277 + GLV+ G LG+ I+ +P G I + +I ++IK + Sbjct: 238 EVSIGLVI------IGFDYPFLLGLFVTIVDALPVLGSGSVMIPWALYNI-IIIKNYMVG 290 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L L+ I + +V + + P +VG I L L T + GV+ G LGL IGPV + + Sbjct: 291 IYLLILY--ILVVVVRQMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVV 348 Query: 338 IAVIWKESIM 347 + + I+ Sbjct: 349 FKALQRAEII 358 >gi|322386253|ref|ZP_08059885.1| permease [Streptococcus cristatus ATCC 51100] gi|321269715|gb|EFX52643.1| permease [Streptococcus cristatus ATCC 51100] Length = 364 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 14/258 (5%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + P +VG + LP L T + G GL+G+ + A+I + Sbjct: 288 IAVFQLVQLIEGNIIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRL 347 Query: 342 WKESIMAIKENKEKISSN 359 +E ++ KE E +S Sbjct: 348 VREFVVE-KEEAEGDTSR 364 >gi|300361263|ref|ZP_07057440.1| permease [Lactobacillus gasseri JV-V03] gi|300353882|gb|EFJ69753.1| permease [Lactobacillus gasseri JV-V03] Length = 393 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 9/185 (4%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLG-EHLFPAYWKKISRIVPKVIRSTFLG 217 +++IFM++ LFF +DG ++ + + L P++ +S I + S G Sbjct: 181 VITMIFMMLLTAPFVLFFMLKDGHRLNPYVTKFAPQKLQPSFSSLLSDI-NGAVASYIRG 239 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A G++ Y + G+ + L V+ ++ MIP G I+F I LI + Sbjct: 240 QITVAFWVGVMFAIGYSVIGLNYGITLAVLAGVLNMIPYFGTFIAFIPAIILGLISSPMM 299 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L ++ AIE + + + P ++G + + + T L+G GL G+ + A Sbjct: 300 LVKVLIVF-AIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGLWGVIFAIPVYA 358 Query: 337 LIAVI 341 +I +I Sbjct: 359 VIKII 363 >gi|209551614|ref|YP_002283531.1| hypothetical protein Rleg2_4043 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537370|gb|ACI57305.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 385 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-- 344 + + ++D L+P L+ + P G++GG + GLLGLF+GPV++++ + K Sbjct: 299 VPIMLIDNILKPVLMARGLSTPMPVILIGVIGGTLSHGLLGLFLGPVVLSVFYELLKAWA 358 Query: 345 --SIMAIKENK 353 S+ EN Sbjct: 359 WPSVQTASENS 369 >gi|298388101|ref|ZP_06997646.1| membrane protein [Bacteroides sp. 1_1_14] gi|298259131|gb|EFI02010.1| membrane protein [Bacteroides sp. 1_1_14] Length = 377 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 80/351 (22%), Positives = 140/351 (39%), Gaps = 38/351 (10%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ + ++ L + L +L M Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCALFLITLVGISLFYLLVPPM 90 Query: 87 L----EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + M +L+ L N G VP+ LS E +++ +ILSE + Sbjct: 91 VSEIGRMNDLLV-TYLTNGAGNNVPKNLS---------EFIHENIDLQALNRILSEENIL 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE---HLFPAY 199 D +PR + L L+I+F I+A F I + + E HL P Sbjct: 141 AAIKDTVPRVWA-----LLAESLNILFSILASFIILLYVIFILLDYEVIAEGWLHLLPNK 195 Query: 200 WKKI-SRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ S +V V + F G ++A G++ + + P +ALG+ + M+P Sbjct: 196 YRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVP 255 Query: 256 GGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I F + ++K I A L ++ +++ I D L P ++G L Sbjct: 256 YLQIIGFLPTVLLAILKAADTGENFWIIIACALAVFAIVQI-IQDTFLVPKIMGKITGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ NKE+I + Sbjct: 315 PAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII----NKERIKYD 361 >gi|300914210|ref|ZP_07131526.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X561] gi|300889145|gb|EFK84291.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X561] Length = 358 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 74/335 (22%), Positives = 135/335 (40%), Gaps = 44/335 (13%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-----TFLAVIATVSVMCLFIVPLLFL 81 +K +P + +I + P+ F SK S FL V + + +IVPLL Sbjct: 46 IKNILSPFFVSALIAYLLNPMVKFFNSKGFSISLSILLVFLIVASGILFFSFYIVPLLIN 105 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSET 139 + +L+M +P + +I + +L +LS+ PQ K+L + Sbjct: 106 EFIALLQM----------------IPFYAEEIQKLLI--QLKFNYLSYLPPQVEKVLDKN 147 Query: 140 FLKTNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 N F S F + L + II + I F+F +D ++++ + + Sbjct: 148 LGSLNN-AFTYHIDSAFKSVITILKDAVDIIIIPIVTFYFLKDKKVFKEEIERILPQKYS 206 Query: 198 AYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + KKI +I+ K +R+ T +AI + L L V +GV+ I+ + Sbjct: 207 TKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLS----LIKVKYAFLIGVLAGILNI 262 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT----LRPFLVGGPIKLPF 309 IP PI +SI + + ++ W I +V + + P ++ + L Sbjct: 263 IPYVGPI----LSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFITPKIMSDSVGLHP 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F L+ G G+ GL + ++A+I I E Sbjct: 319 VTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIE 353 >gi|329769779|ref|ZP_08261180.1| hypothetical protein HMPREF0433_00944 [Gemella sanguinis M325] gi|328838141|gb|EGF87759.1| hypothetical protein HMPREF0433_00944 [Gemella sanguinis M325] Length = 386 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 16/190 (8%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKK-----ISRIVPKVIRSTFLGMTIIAIGEGLV 228 LFF +D + + L SL P KK I I KV S G ++++ G++ Sbjct: 202 LFFLLKDASNFKEYLVSL----LPKKLKKPVVDTIDEIDNKV-GSYIQGQMLVSLCIGVM 256 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN---IFNATCLFLWG 285 L Y + G+ +L I A ++++P PI A++ +L+ + I L +WG Sbjct: 257 LYIGYTIIGLHYGFSLATIAAFLSIVPYIGPI--IAITPAMLVAASTSWIMVVKMLVVWG 314 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ F+ + P ++G + + L F ++ GV G++G +G + +++ V+ + Sbjct: 315 IVQ-FLEANIISPNIMGKSMDMHPLTVIFVILIGVNLAGVVGAILGIPVYSMLKVLGSKI 373 Query: 346 IMAIKENKEK 355 AI E K Sbjct: 374 QEAITERYNK 383 >gi|295399501|ref|ZP_06809483.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] gi|294978967|gb|EFG54563.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] Length = 372 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 38/361 (10%) Query: 12 MRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R++++ I+V +LY++ P + A I F P+ F+ K + +LAV+ T Sbjct: 10 LRFLLVIAIVVLGAIALYYVSTVIYPFIIAFFIAFFINPLVD-FLETKAKMPRWLAVVVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-------------QHGIPVPRWLSDIP 114 + V+ + L+ L ++ + ++ VV N Q IP+ L+ + Sbjct: 69 LIVLFALVAGLVTLLIAEIVSGTQYLANVVPENFQKLVKYIETFFAQQIIPLYHDLAALF 128 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL---DYCLSIIFMI 171 + AS+ T +++ Q++ T + T F R + + IF + Sbjct: 129 KNLDASQQDTI-MNNIQAVG----TQIATTVGQFTQRVLQNIPQLLTWLPNAATVFIFSL 183 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM-----TIIAIGEG 226 +A FF +D + +L + + + PA K + V ++ G T+I+I Sbjct: 184 LATFFISKDWY----RLTGMVQKILPAKAHKSGKRVFLDLKKALFGFIKAQATLISITTV 239 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +VL L GV + + +I ++ ++P G I F IY I GNI A L + Sbjct: 240 IVLIGLLIL-GVDYAITIALIIGLVDILPYLGTGIVFVPWIIYAAISGNIPFAIGLGVLY 298 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I L + + + P ++ I L L T L G + +G LGL +GPV + +I + + Sbjct: 299 IIVL-VQRQIMEPKVLSSSIGLDPLATLVALFVGFKLIGFLGLIVGPVTLVIIRTLHSAN 357 Query: 346 I 346 + Sbjct: 358 V 358 >gi|326423645|ref|NP_759024.2| putative permease [Vibrio vulnificus CMCP6] gi|319998997|gb|AAO08551.2| Predicted permease [Vibrio vulnificus CMCP6] Length = 360 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI--PGGAP 259 + ++ +R +G+ IA ++ G+ LAGVP+ +I + A++ P Sbjct: 209 SLHKLTTATLRQVAVGIIGIAFLTAMIFGAIVGLAGVPAASLFTLIALVFAIVQLPVTVV 268 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ G NA L I +D L+P ++G + +P G VGG Sbjct: 269 ALVAVAVLWSGDSGTAHNAIFTVL--IIAASFIDNFLKPIILGRGLDVPMPIILIGAVGG 326 Query: 320 VRTMGLLGLFIGPVLMA 336 V + G+LG+F+G A Sbjct: 327 VMSGGILGMFVGAAFFA 343 >gi|193782592|ref|NP_435597.2| hypothetical protein SMa0665 [Sinorhizobium meliloti 1021] gi|193073048|gb|AAK65009.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 384 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F LF I L I+D ++P LV + P L G++GG + GL+GLF+GP+++ Sbjct: 290 FGMAALFTILLIPLLIIDNVMKPILVARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVL 349 Query: 336 ALIAVIWKESIMAIKENKEKISSN 359 ++ S++ I N + + S Sbjct: 350 SVF-----HSLLLIWMNTDTVGSE 368 >gi|158336770|ref|YP_001517944.1| hypothetical protein AM1_3638 [Acaryochloris marina MBIC11017] gi|158307011|gb|ABW28628.1| conserved membrane protein [Acaryochloris marina MBIC11017] Length = 351 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 35/181 (19%) Query: 200 WKKISRIVPKVIRSTFL------------GMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 WK + R +PK R+ F G ++A+ + + VP + L V+ Sbjct: 182 WKWLLRGLPKASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVPLILAVV 241 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--------DKTLRP 298 I MIPG GA I +S+ LL +G LW A+++ I + L P Sbjct: 242 AGIFDMIPGIGATIGIGLISLILLPQG---------LWRAMQVLIACIVLQQIEENILMP 292 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 ++ +++ + FF L+ G R GL+GLF+ P+ L++++ ++ +E+ + S Sbjct: 293 RVMQNSLQMNPVVLFFALLIGSRLAGLVGLFLSIPIAGVLLSLMDNDT----EEDDNEFS 348 Query: 358 S 358 Sbjct: 349 K 349 >gi|268319844|ref|YP_003293500.1| hypothetical protein FI9785_1373 [Lactobacillus johnsonii FI9785] gi|262398219|emb|CAX67233.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 388 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 9/185 (4%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLG-EHLFPAYWKKISRIVPKVIRSTFLG 217 +++IFM + LFF +DG ++ + + + L P++ +S I + S G Sbjct: 181 VITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKIAPKKLQPSFSSLLSDI-NGAVASYIRG 239 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A G++ Y + G+ + L V+ I+ MIP G I+F I LI + Sbjct: 240 QITVAFWVGVIFAIGYSVIGLNYGITLAVLAGILNMIPYFGTFIAFIPAIILGLISSPMM 299 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L ++ AIE + + + P ++G + + + T L+G GL G+ + A Sbjct: 300 LIKVLIVF-AIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGLWGVIFAIPVYA 358 Query: 337 LIAVI 341 +I +I Sbjct: 359 VIKII 363 >gi|217964433|ref|YP_002350111.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|217333703|gb|ACK39497.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|307571002|emb|CAR84181.1| membrane protein, putative [Listeria monocytogenes L99] Length = 345 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 >gi|241710578|ref|XP_002412051.1| transmembrane protein, putative [Ixodes scapularis] gi|215505112|gb|EEC14606.1| transmembrane protein, putative [Ixodes scapularis] Length = 968 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 14/190 (7%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G L++ L+ + + ALF+ R + LD L + P ++ V + + F Sbjct: 697 GTAVLNFVLNFVVFLTALFYLLRASGERYKPLD-LFASMLPGSASRLGEAVEEAVAGVFA 755 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP------ISFTAVSIYLL 270 +A GL WL V + I +A + G P AV L Sbjct: 756 ASFKMAAFYGLYT----WLIHTLFEVKMVYIPTALASLFGAVPFIGAYWACLPAVLELWL 811 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++G + A C+ L VD + + GG PFL T + GGV +G G Sbjct: 812 VQGQVVKALCMLLCQLAPTSFVDCAIYSEIKGG--GHPFL-TGLAIAGGVFCLGFQGALF 868 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 869 GPMLLCVLIV 878 >gi|46907647|ref|YP_014036.1| hypothetical protein LMOf2365_1438 [Listeria monocytogenes str. 4b F2365] gi|226224020|ref|YP_002758127.1| hypothetical protein Lm4b_01428 [Listeria monocytogenes Clip81459] gi|254824521|ref|ZP_05229522.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254829822|ref|ZP_05234477.1| hypothetical protein Lmon1_00635 [Listeria monocytogenes 10403S] gi|254852537|ref|ZP_05241885.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254932604|ref|ZP_05265963.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|255521340|ref|ZP_05388577.1| hypothetical protein LmonocFSL_08960 [Listeria monocytogenes FSL J1-175] gi|300765772|ref|ZP_07075748.1| hypothetical protein LMHG_11889 [Listeria monocytogenes FSL N1-017] gi|46880915|gb|AAT04213.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876482|emb|CAS05191.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605846|gb|EEW18454.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293584163|gb|EFF96195.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593760|gb|EFG01521.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300513547|gb|EFK40618.1| hypothetical protein LMHG_11889 [Listeria monocytogenes FSL N1-017] gi|328465467|gb|EGF36696.1| hypothetical protein LM1816_05950 [Listeria monocytogenes 1816] gi|328475017|gb|EGF45809.1| hypothetical protein LM220_07922 [Listeria monocytogenes 220] Length = 345 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 >gi|110637635|ref|YP_677842.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280316|gb|ABG58502.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 366 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 73/348 (20%), Positives = 158/348 (45%), Gaps = 46/348 (13%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + +L +I+ + PI + ++ S + AV+ T + +FIVP L + + E Sbjct: 39 FVSILLGGIILAVAASPILTLLRNRFNLSDKWGAVLITCVALIVFIVPSYLLIHSLIREF 98 Query: 90 KELVSKV-------VLANQHGIPVPR-----WLSDIPGGMWASELWTKHLSHPQSLKILS 137 +S ++ N G+P+ + +L ++ +S ++ +H + +++ I Sbjct: 99 THFISPENRAAVTGMIENLRGLPLIQDTLYEFLKNLTNN--SSVVFKEHATQIEAVGIGV 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF- 196 F+ G+ + AS +IIA F ++Q L E +F Sbjct: 157 LGFIGGLGLGLVHFLAS---------------VIIAGLFLAH-----AKQSAGLAEKIFI 196 Query: 197 ---PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ S I + I++ G+ +A E ++ +++AGVP V+ ++++ Sbjct: 197 RIAGKNGEEFSHITERTIQNVTKGIIGVAFLESVLAAFGFFVAGVPLAGVWTVVCLLLSI 256 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV--GGPIKLPFLP 311 + G + IY+ G+ A+ L W + ++I + ++P L+ G P+ +P + Sbjct: 257 VQLGIVPLAVPIVIYMFYTGSPVTASLLAAW-MVLIYIFEHLMKPILLSKGAPVPMPII- 314 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F G+VGG G +G+F+G VL ++ +K ++ ++ + +K++ N Sbjct: 315 -FIGVVGGFIAGGFIGMFLGAVLF---SIAYKLFLVWLENDVQKVAHN 358 >gi|163942140|ref|YP_001647024.1| hypothetical protein BcerKBAB4_4237 [Bacillus weihenstephanensis KBAB4] gi|163864337|gb|ABY45396.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 355 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + F L+ G G++GL I ++A+I + Sbjct: 297 ------LSPYIVGKSLRMHPVIIMFALLVGGEVAGIVGLLISVPILAVIRTV 342 >gi|16803459|ref|NP_464944.1| hypothetical protein lmo1419 [Listeria monocytogenes EGD-e] gi|47095370|ref|ZP_00232980.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|224499726|ref|ZP_03668075.1| hypothetical protein LmonF1_08559 [Listeria monocytogenes Finland 1988] gi|224501639|ref|ZP_03669946.1| hypothetical protein LmonFR_03832 [Listeria monocytogenes FSL R2-561] gi|254827707|ref|ZP_05232394.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254898415|ref|ZP_05258339.1| hypothetical protein LmonJ_01330 [Listeria monocytogenes J0161] gi|254912094|ref|ZP_05262106.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254936421|ref|ZP_05268118.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284801805|ref|YP_003413670.1| hypothetical protein LM5578_1560 [Listeria monocytogenes 08-5578] gi|284994947|ref|YP_003416715.1| hypothetical protein LM5923_1512 [Listeria monocytogenes 08-5923] gi|16410848|emb|CAC99497.1| lmo1419 [Listeria monocytogenes EGD-e] gi|47016191|gb|EAL07114.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258600086|gb|EEW13411.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258609013|gb|EEW21621.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284057367|gb|ADB68308.1| hypothetical protein LM5578_1560 [Listeria monocytogenes 08-5578] gi|284060414|gb|ADB71353.1| hypothetical protein LM5923_1512 [Listeria monocytogenes 08-5923] gi|293590062|gb|EFF98396.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 345 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 >gi|222153253|ref|YP_002562430.1| membrane protein [Streptococcus uberis 0140J] gi|222114066|emb|CAR42470.1| putative membrane protein [Streptococcus uberis 0140J] Length = 393 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 18/241 (7%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 +WL + + +EL + Q +E+F K N I++ FAS I +SI Sbjct: 140 KWLVN-----YKAELQDMLTNISQKALDYAESFSK-NAINWAGNFASAIARI----TVSI 189 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIG 224 I LF+F RD S D L L ISR+ + + + G +AI Sbjct: 190 IISPFILFYFLRDS---SMMKDGLVNVLPTKVRIPISRVLGDINQQLSGYVQGQVTVAII 246 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 G + G + + G+ + + + M+P G+ ++ V I +++G I L + Sbjct: 247 VGFMFGIMFSIVGLKYSITFSIAAGFLNMVPYLGSFLAMIPVVIMAMVQGPIMLIKVLII 306 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + IE I + + P ++G + + + F L+ G+ G+F+ A + VI K Sbjct: 307 F-TIEQTIEGRFVTPLVLGNKLSIHPITIMFLLLTAGAMFGVWGVFLVIPFYASVKVIVK 365 Query: 344 E 344 E Sbjct: 366 E 366 >gi|255027621|ref|ZP_05299607.1| hypothetical protein LmonocytFSL_16972 [Listeria monocytogenes FSL J2-003] Length = 345 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 >gi|227889594|ref|ZP_04007399.1| permease [Lactobacillus johnsonii ATCC 33200] gi|227849842|gb|EEJ59928.1| permease [Lactobacillus johnsonii ATCC 33200] Length = 393 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 9/185 (4%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLG-EHLFPAYWKKISRIVPKVIRSTFLG 217 +++IFM + LFF +DG ++ + + + L P++ +S I + S G Sbjct: 181 VITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKIAPKKLQPSFSSLLSDI-NGAVASYIRG 239 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A G++ Y + G+ + L V+ I+ MIP G I+F I LI + Sbjct: 240 QITVAFWVGVIFAIGYSVIGLNYGITLAVLAGILNMIPYFGTFIAFIPAIILGLISSPMM 299 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L ++ AIE + + + P ++G + + + T L+G GL G+ + A Sbjct: 300 LIKVLIVF-AIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGLWGVIFAIPVYA 358 Query: 337 LIAVI 341 +I +I Sbjct: 359 VIKII 363 >gi|167038699|ref|YP_001661684.1| hypothetical protein Teth514_0024 [Thermoanaerobacter sp. X514] gi|307723242|ref|YP_003902993.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X513] gi|166852939|gb|ABY91348.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X514] gi|307580303|gb|ADN53702.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X513] Length = 355 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 35/250 (14%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMI 171 + T ++S P ++ L E+ + + +++I FA L++ + + + Sbjct: 116 VDRIRTYYISLPPNITSLIESNMHS-ILNYISLFAKNLATWLLNFATKLPNFFFMTLITL 174 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----------MTII 221 +A FF +D I LD + + P++W + ++ + + TF G +T + Sbjct: 175 VATFFISKDKNLI---LDFIKRQI-PSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFL 230 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFN 277 + GLV+ G LG+ I+ +P G I + +I ++IK + Sbjct: 231 EVSIGLVI------IGFDYPFLLGLFVTIVDALPVLGSGSVMIPWALYNI-IIIKNYMVG 283 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L L+ I + +V + + P +VG I L L T + GV+ G LGL IGPV + + Sbjct: 284 IYLLILY--ILVVVVRQMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVV 341 Query: 338 IAVIWKESIM 347 + + I+ Sbjct: 342 FKALQRAEII 351 >gi|87301132|ref|ZP_01083973.1| hypothetical protein WH5701_14641 [Synechococcus sp. WH 5701] gi|87284100|gb|EAQ76053.1| hypothetical protein WH5701_14641 [Synechococcus sp. WH 5701] Length = 347 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 13/195 (6%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F + FG +FL ++I ++ +G + SQ L L E + + + + + V + Sbjct: 147 FTNVFGGVFL--------LVIVVYMLVDNGATWSQALRLLPEDVRGRFDRSVQKNVLGFL 198 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 R M +++ LV + L GV + L ++ ++ IPG GA + S + Sbjct: 199 RGQITLMIFLSLASFLV----FALLGVKFSLVLAIVVGVLDAIPGIGATLGVIVASGLVF 254 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + + I D + P ++G +++ + FF L G R GLLG+F+ Sbjct: 255 LTQGQWLALQVVIASVVLQQIQDNLIHPRVMGRALEIRPVVLFFALFVGERLAGLLGVFL 314 Query: 331 GPVLMALIAVIWKES 345 + +I KES Sbjct: 315 AIPVTGMILGWGKES 329 >gi|238788116|ref|ZP_04631911.1| permease perM [Yersinia frederiksenii ATCC 33641] gi|238723703|gb|EEQ15348.1| permease perM [Yersinia frederiksenii ATCC 33641] Length = 354 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 60/271 (22%), Positives = 122/271 (45%), Gaps = 44/271 (16%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWP---IYSSFISKKEE 57 R +PQ I +I+ + LYF G AP+L+A+++ + WP + S+ Sbjct: 10 RRRFADPQVIALLVILLVGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQRVGCSRPWA 69 Query: 58 SSTFLAVIATVSVMCLFIV-PLLFLFYYGML-EMKELVSKVVLANQHGIPVP-RWLSDIP 114 +S L V A++ ++ +F+V P ++ ++ +M ++++K N +P R+ + + Sbjct: 70 ASIVLVVFASIMLLAVFVVAPTVWQQGNNLISDMPKMLNKF---NAFAQTLPARYPALVD 126 Query: 115 GG---MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 G M A L +K L + E+ +K + AS G++ L + +I + Sbjct: 127 AGIVDMMAENLRSK-------LSGMGESVVKIS-------LASLIGLLTL--AIYLILVP 170 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFP-------AYWKKISRIVPKVIRSTFLGMTIIAIG 224 + LFF +D +Q+ + + P W ++++ + IR L M ++ I Sbjct: 171 LMLFFLLKD----KEQMLNAVRRILPRNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGIA 226 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 LV +++ G+ + L V+ +IP Sbjct: 227 TYLV----FFVMGMNYALLLAVLVGFSVLIP 253 >gi|228987642|ref|ZP_04147756.1| hypothetical protein bthur0001_43120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772102|gb|EEM20554.1| hypothetical protein bthur0001_43120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 361 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +I+ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LL+K I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLVKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 297 FVESNILSPYIVGKSLRMHPVVIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 356 Query: 343 KES 345 K+ Sbjct: 357 KKE 359 >gi|47092709|ref|ZP_00230495.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|47018897|gb|EAL09644.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] Length = 333 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 185 KVIEAQF----IIALVNAILTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 240 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 241 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 296 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 297 GIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 331 >gi|229158006|ref|ZP_04286077.1| hypothetical protein bcere0010_41850 [Bacillus cereus ATCC 4342] gi|228625459|gb|EEK82215.1| hypothetical protein bcere0010_41850 [Bacillus cereus ATCC 4342] Length = 361 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +I+ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LL+K I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLVKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 297 FVESNILSPYIVGKSLRMHPVVIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 356 Query: 343 KES 345 K+ Sbjct: 357 KKE 359 >gi|297543538|ref|YP_003675840.1| sporulation integral membrane protein YtvI [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841313|gb|ADH59829.1| sporulation integral membrane protein YtvI [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 354 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 35/250 (14%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMI 171 + T ++S P ++ L E+ + + +++I FA L++ + + + Sbjct: 115 VDRIRTYYISLPPNITSLIESNMYS-ILNYISLFAKNLATWLLNFATKLPNFFFMTLITL 173 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----------MTII 221 +A FF +D I LD + + P++W + ++ + + TF G +T + Sbjct: 174 VATFFISKDKNLI---LDFIKRQI-PSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFL 229 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFN 277 + GLV+ G LG+ I+ +P G I + +I ++IK + Sbjct: 230 EVSIGLVI------IGFDYPFLLGLFVTIVDALPVLGSGSVMIPWALYNI-IIIKNYMVG 282 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L L+ I + +V + + P +VG I L L T + GV+ G LGL IGPV + + Sbjct: 283 IYLLILY--ILVVVVRQMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVV 340 Query: 338 IAVIWKESIM 347 + + I+ Sbjct: 341 FKALQRAEII 350 >gi|150398999|ref|YP_001322766.1| hypothetical protein Mevan_0245 [Methanococcus vannielii SB] gi|150011702|gb|ABR54154.1| protein of unknown function UPF0118 [Methanococcus vannielii SB] Length = 336 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/194 (19%), Positives = 88/194 (45%), Gaps = 9/194 (4%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I+ + ++F +DG + + ++ + + + ++ F+G + + Sbjct: 144 IKILITVFLTYYFLKDGHNFKGAIMPHVPDVYAPQTELFMENLHEAYKNLFVGNALTSFT 203 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLF 282 G++ +W G+P+ V LG ++ I+ ++P GG I + + ++ + G A LF Sbjct: 204 VGIISIIGFWAMGLPNPVTLGALSGILTLLPVVGGWTI-YMPLCLFYIATGMYLKALLLF 262 Query: 283 LWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +G + L + D +RP +V + + G +G+ G +GP+++ I Sbjct: 263 GFGVLFLSLAPDFVIRPSIVSNESDIHPALLLIAFLMGPLALGITGFALGPIIVGTFDAI 322 Query: 342 WK-----ESIMAIK 350 ++ +SI+ +K Sbjct: 323 FRVRTGEDSIINLK 336 >gi|229032040|ref|ZP_04188023.1| hypothetical protein bcere0028_40850 [Bacillus cereus AH1271] gi|228729285|gb|EEL80279.1| hypothetical protein bcere0028_40850 [Bacillus cereus AH1271] Length = 361 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMLALLVGGEIAGIVGLLISVPILAVIRTVIVHVRPLL 356 Query: 349 IKEN 352 KEN Sbjct: 357 KKEN 360 >gi|282879126|ref|ZP_06287885.1| membrane family protein [Prevotella buccalis ATCC 35310] gi|281298768|gb|EFA91178.1| membrane family protein [Prevotella buccalis ATCC 35310] Length = 372 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 66/362 (18%), Positives = 148/362 (40%), Gaps = 33/362 (9%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++F +L + +L G P A + + +P+ K +A+I T+ + + Sbjct: 19 LLIFFVLYLVNYLSGVLLPFFVAWLFAYLLYPLVKFVQYKMHVKVRAIAIIITMLAVAVV 78 Query: 75 IVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 I L++ M+E + ++++ + + H SD+ G + S+ TK+ + Sbjct: 79 IGGLVYAIIPPMIEQFGKLNDILNNWINQSTHS-------SDL--GSYISQWITKNRTE- 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 E+F+K+ I + L S++ IIA F I Q + Sbjct: 129 ------IESFMKSKDFSDILKTGMPKVFTLLGQTASVVISIIASLITLLYTFFILQDYEF 182 Query: 191 LGEH---LFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L ++ +FP +W+++ + V + + + G ++++ G++ G + P +A Sbjct: 183 LTDNWIRIFPKKNRPFWEELMKDVERELNNYIRGQGLVSLILGILFGIGLSIINFPMAIA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIV-----DKTLR 297 LG++ M ++P ++ + ++K ++G A+ +F++ D L Sbjct: 243 LGIMMGFMNLVPYLHTLALVPMVFLSMLKAADTGQNFWIVFGLAMLVFLIVQVISDTVLT 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P ++G + L L +G +GL + L L+ W++ + K+ E Sbjct: 303 PKIMGKAMNLNPAILLLSLSVWGTLLGFIGLIVALPLTTLLIAYWQKYVTREKKQDETTQ 362 Query: 358 SN 359 Sbjct: 363 EQ 364 >gi|326942172|gb|AEA18068.1| hypothetical protein CT43_CH4407 [Bacillus thuringiensis serovar chinensis CT-43] Length = 355 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 291 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVRPLL 350 Query: 349 IKEN 352 KEN Sbjct: 351 KKEN 354 >gi|228941558|ref|ZP_04104107.1| hypothetical protein bthur0008_41950 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974488|ref|ZP_04135055.1| hypothetical protein bthur0003_42410 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981082|ref|ZP_04141383.1| hypothetical protein bthur0002_42430 [Bacillus thuringiensis Bt407] gi|228778623|gb|EEM26889.1| hypothetical protein bthur0002_42430 [Bacillus thuringiensis Bt407] gi|228785205|gb|EEM33217.1| hypothetical protein bthur0003_42410 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818114|gb|EEM64190.1| hypothetical protein bthur0008_41950 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 361 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVRPLL 356 Query: 349 IKEN 352 KEN Sbjct: 357 KKEN 360 >gi|47566578|ref|ZP_00237400.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47556608|gb|EAL14940.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 361 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +I+ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LL+K I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLVKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 356 Query: 343 KES 345 K+ Sbjct: 357 KKE 359 >gi|113477436|ref|YP_723497.1| hypothetical protein Tery_4001 [Trichodesmium erythraeum IMS101] gi|110168484|gb|ABG53024.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 368 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 22/206 (10%) Query: 166 SIIFMIIALFFFYRDGF--SISQQLDSLGEHLFPAYWKKISRIVPKVIRST------FLG 217 SI+ +I+ALF G+ S SQ L + LFP W K R+ +VI T G Sbjct: 158 SIVSLILALFI---SGYMVSDSQTLITSIVKLFPQPWDK--RLEDQVIPVTKRMGGYIRG 212 Query: 218 MTIIAIGEGLVLGSAYWLAGVPS-HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 I++ GL + G+ + LG I A+ +IP PI AV ++ I Sbjct: 213 RIIVSAILGLATTTGLGFLGLQDFSLGLGAIAAVTNLIPFIGPI-LGAVPALIV---AIA 268 Query: 277 NATCLFLWGAIELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 LFLW I +I+ L P LVG + + L ++ GV+ +G++G I P Sbjct: 269 KGGWLFLWVIILYYIIQNIETYILDPLLVGSSVGVHPLYQLLSVLVGVQLLGIIGALIIP 328 Query: 333 VLMALIAVIWKESIMAIKENKEKISS 358 A A + + + K E I S Sbjct: 329 PWFAGAAALVENLYLKPKLEAENIQS 354 >gi|295397298|ref|ZP_06807392.1| protein of hypothetical function UPF0118 [Aerococcus viridans ATCC 11563] gi|294974449|gb|EFG50182.1| protein of hypothetical function UPF0118 [Aerococcus viridans ATCC 11563] Length = 406 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 15/185 (8%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL----GMTI 220 L I+F I LF + +++Q+D L ++ V +V TF GM I Sbjct: 187 LGILFAIYILFSKEK----LAKQVDRLLTVYVRDDIHQLIENVARVANETFAKFISGMVI 242 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +I G ++ ++ VP LGV+ +MA+IP AV + +L+ N T Sbjct: 243 ESIILGTLVTVGLFILQVPYAAMLGVLQGVMALIPIIGAFLSGAVGVLILLA---LNPTY 299 Query: 281 LFLWGAIELFIVD---KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMA 336 ++ LF+ + P +VG I LP + F + G MG+ G+ IG PVL + Sbjct: 300 ALIYLIFVLFVQQLEGDLIYPRVVGDSIGLPSMWVLFAVTVGGGLMGIPGMLIGVPVLAS 359 Query: 337 LIAVI 341 + +I Sbjct: 360 IYKII 364 >gi|220906628|ref|YP_002481939.1| hypothetical protein Cyan7425_1198 [Cyanothece sp. PCC 7425] gi|219863239|gb|ACL43578.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 390 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/202 (20%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 LD ++++ I+ F+ + G + SL + L P + S+ + ++ F+G Sbjct: 171 LLDVLINVVLTIVLTFYLLQHG---DELWSSLIQWLPPKVQEPFSQTLRLSFQNYFIGQL 227 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 I++ L S + L VP + G+ +MA++P G + +++ + ++ +++ Sbjct: 228 ILSTCMAAGLISTFLLLKVPFGLLFGLTIGLMALVPFGGTVGIITITLLVTLQ-DVWLGL 286 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + I I++ + P ++G L + F ++ G + GLLG+ + +I Sbjct: 287 RVLGASVIVQQILENLIAPRIIGSVTGLNPVWVFLSILAGAKIGGLLGVVVAVPTAVVI- 345 Query: 340 VIWKESIMAIKE--NKEKISSN 359 K +MA++E N+ +N Sbjct: 346 ---KAGLMALRERMNQSNTEAN 364 >gi|326202288|ref|ZP_08192157.1| sporulation integral membrane protein YtvI [Clostridium papyrosolvens DSM 2782] gi|325987406|gb|EGD48233.1| sporulation integral membrane protein YtvI [Clostridium papyrosolvens DSM 2782] Length = 353 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 76/353 (21%), Positives = 152/353 (43%), Gaps = 51/353 (14%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLF 74 +I +S+ +L FFAP + ALI+ + + P+ IS+K ++ ++++ T+S++ L Sbjct: 23 VIYLSMSYLLPFFAPFVIALIVSYINEPVIKLLQRLKISRKAAAA--VSLLFTMSLLGLV 80 Query: 75 IVPLLFLFYYGMLEMKELVSKV-----VLANQHGIPVPRWLSDIPGGMWASELWTKHL-- 127 + + Y ++ +++ ++K V N + + +P + ++ TK+L Sbjct: 81 LTVGILKMYNELIVLQDNLTKYSSDISVKINGLIHKATLFYNGLPDQVTST--ITKNLIS 138 Query: 128 -SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD-GFSIS 185 S L I S N + IPR + L FFYR FS Sbjct: 139 FSEKIGLIITSVIQYVINTVSSIPRLTVFVIVTILGTYFISSDKKSISSFFYRQLPFSWR 198 Query: 186 QQLDSLGEHLFPA---YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + SL + F A Y+K I +G T I + GL + +V Sbjct: 199 KNIVSLKKDTFKALLGYFKAIL---------ILMGFTFIEVSIGLFI----------LNV 239 Query: 243 ALGVITAIMAMIPGGAPISFTAVS-----IYLLIKGNI---FNATCLFLWGAIELFIVDK 294 + A++ + PI T V ++ +I G++ + +++ G ++ + Sbjct: 240 DYAFLIALLVGLSDAIPIMGTGVVMVPWILWTVISGDMPLALGLSIIYVLG----ILIRQ 295 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P +VG I L L T F + G++ G++G+F+GP+ + ++ + +M Sbjct: 296 IMEPKIVGSQIGLHPLVTLFAMYIGLKFFGIIGMFVGPISIIVVKKLQDSGVM 348 >gi|295426406|ref|ZP_06819056.1| membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063774|gb|EFG54732.1| membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 404 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 24/194 (12%) Query: 164 CLSIIFMIIA--------LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +SII MII LFF +DG ++ + + + K+ + I S Sbjct: 178 AVSIITMIIMTLMTAPFLLFFMLKDGHNLRPYITKFAPQRWQKSFGKLLWDINNAISSYI 237 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA-------VSI 267 G +A G++ Y + G+P L ++ + +IP G I+F S+ Sbjct: 238 RGQITVAFWVGVMFAIGYTVVGLPYGYTLAILAGFLNLIPYFGTFIAFIPALVIGIMTSV 297 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +LIK + + AIE I + + P ++G +++ + T L+G GL G Sbjct: 298 PMLIK--------VLIVFAIEQAIEGRVISPLVMGNKLEMHPITTILLLIGASAVWGLWG 349 Query: 328 LFIGPVLMALIAVI 341 + G + A++ +I Sbjct: 350 VVFGIPIYAVLKII 363 >gi|312109941|ref|YP_003988257.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] gi|311215042|gb|ADP73646.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] Length = 372 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 156/361 (43%), Gaps = 38/361 (10%) Query: 12 MRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R++++ I+V +LY++ P + A I F P+ F+ K + +LAV+ T Sbjct: 10 LRFLLVIAIVVLGAIALYYVSTVIYPFIIAFFIAFFINPLVD-FLETKAKMPRWLAVVVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-------------QHGIPVPRWLSDIP 114 + V+ + L+ L ++ + ++ VV N Q IP+ L+ + Sbjct: 69 LIVLFALVAGLVTLLIAEIVSGTQYLANVVPENFQKLVKYIETFFAQQIIPLYHDLAALF 128 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL---DYCLSIIFMI 171 + AS+ T +++ Q++ T + T F R + + IF + Sbjct: 129 KNLDASQQDTI-MNNIQAVG----TQIATTVGQFTQRVLQNIPQLLTWLPNAATVFIFSL 183 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM-----TIIAIGEG 226 +A FF +D + +L + + + PA K + V ++ G T+I+I Sbjct: 184 LATFFISKDWY----RLTGMVQKILPAKAHKSGKRVFLDLKKALFGFIKAQATLISITTV 239 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +VL L GV + + +I ++ ++P G I F IY I GN+ A L + Sbjct: 240 IVLIGLLIL-GVDYAITIALIIGLVDILPYLGTGIVFVPWIIYAAISGNVPFAIGLGVLY 298 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I L + + + P ++ I L L T L G + +G LGL +GPV + +I + + Sbjct: 299 IIVL-VQRQIMEPKVLSSSIGLDPLATLVALFVGFKLIGFLGLIVGPVTLVIIRTLHSAN 357 Query: 346 I 346 + Sbjct: 358 V 358 >gi|154243769|ref|YP_001409342.1| permease-like protein [Xanthobacter autotrophicus Py2] gi|154162891|gb|ABS70106.1| permease-like protein [Xanthobacter autotrophicus Py2] Length = 239 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Query: 282 FLWGAIELFI-------VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 +L GAI L + +D LRP LVG +LP VGG+ +G+ G IGP++ Sbjct: 162 YLTGAILLAVGVLVISTIDNFLRPALVGRGRRLPDYVVLISTVGGLSLIGMNGFVIGPLI 221 Query: 335 MALIAVIW 342 AL W Sbjct: 222 AALFVADW 229 >gi|322833961|ref|YP_004213988.1| hypothetical protein Rahaq_3267 [Rahnella sp. Y9602] gi|321169162|gb|ADW74861.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 354 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 40/269 (14%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWP---IYSSFISKKEE 57 R +PQ I I+ LYFL G AP+L A+++ + WP + +S+ Sbjct: 10 RRRFTDPQAIALLAILVAGFCILYFLNGILAPLLVAIVLAYLLEWPTVRLQHVGLSRTLS 69 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGG 116 S L + A + ++ +F++ + + G+ M +L S + +P R+ + + G Sbjct: 70 VSVVLIIFAGILLLGMFVIAPV-TWQQGVNLMTDLPSMLNRFYDFAATLPKRYPALVDAG 128 Query: 117 ---MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 M A + +K L L E+ +K + AS G++ L L ++ M++ Sbjct: 129 IIDMMAENMRSK-------LSGLGESVVKYS-------LASLVGLLTLAIYLILVPMMV- 173 Query: 174 LFFFYRDGFSISQQLDSLGEHLFP-------AYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 FF +D +Q+ S + P W ++++ V IR L M I+ + Sbjct: 174 -FFLLKD----KEQMLSAVRRVLPRDRGLAGQVWVEMNQQVTNYIRGKVLEMIIVGVATY 228 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIP 255 LV +W+ + + L V+ + +IP Sbjct: 229 LV----FWVMDLHYSLLLAVLVGVSVLIP 253 >gi|295699812|ref|YP_003607705.1| hypothetical protein BC1002_4201 [Burkholderia sp. CCGE1002] gi|295439025|gb|ADG18194.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 19/241 (7%) Query: 126 HLSHPQSLKILS--ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRD 180 H P +I+ + ++T +P A G+ + ++I+++ I F +D Sbjct: 115 HFLEPLRERIVDFVRSQIETGSDKAVP-LARSLGLGVVHAASNLIYLVLIPILSFLLIKD 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +L W +I V ++ + +++ G A+ L GVP Sbjct: 174 GERMRDAFLALLNRRHRVLWSEIVDDVNVLLSKYVRALLFLSLATLFGYGVAFSLLGVPY 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW-----GAIELFIVDKT 295 L V ++ +P P++ AV+I L++ +F+ LW G LF D Sbjct: 234 AFLLAVSAGLLEFVPFAGPLA--AVAITLVVA--VFSGYPHLLWLVIFIGLYRLF-QDYV 288 Query: 296 LRPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 L P+L+ +++ PFL GL+ G + G+ G+F+ PV+ L VI + + ++ Sbjct: 289 LNPYLMSEGVEVSPFL-VIVGLLAGDQLGGVAGIFLAVPVIATLKIVIGRARVFYSASHE 347 Query: 354 E 354 + Sbjct: 348 Q 348 >gi|150377302|ref|YP_001313897.1| hypothetical protein Smed_5187 [Sinorhizobium medicae WSM419] gi|150031849|gb|ABR63964.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 381 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 36/62 (58%) Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F LF I L I+D ++P LV + P L G++GG + GL+GLF+GP+++ Sbjct: 290 FGMAALFTILLIPLLIIDNVMKPILVARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVL 349 Query: 336 AL 337 ++ Sbjct: 350 SV 351 >gi|116629975|ref|YP_815147.1| permease [Lactobacillus gasseri ATCC 33323] gi|238853587|ref|ZP_04643957.1| transport protein [Lactobacillus gasseri 202-4] gi|282851417|ref|ZP_06260782.1| membrane family protein [Lactobacillus gasseri 224-1] gi|311110392|ref|ZP_07711789.1| membrane protein [Lactobacillus gasseri MV-22] gi|116095557|gb|ABJ60709.1| Predicted permease [Lactobacillus gasseri ATCC 33323] gi|238833805|gb|EEQ26072.1| transport protein [Lactobacillus gasseri 202-4] gi|282557385|gb|EFB62982.1| membrane family protein [Lactobacillus gasseri 224-1] gi|311065546|gb|EFQ45886.1| membrane protein [Lactobacillus gasseri MV-22] Length = 393 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLG-EHLFPAYWKKISRIVPKVIRSTFLG 217 +++IFM + LFF +DG ++ + + L P++ +S I + S G Sbjct: 181 VITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKFAPQRLQPSFSSLLSDI-NGAVASYIRG 239 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A G++ Y + G+ + L V+ ++ MIP G I+F I LI + Sbjct: 240 QITVAFWVGVMFAIGYSVIGLNYGITLAVLAGVLNMIPYFGTFIAFIPAIILGLISSPMM 299 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L ++ AIE + + + P ++G + + + T L+G GL G+ + A Sbjct: 300 LVKVLIVF-AIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGLWGVIFAIPVYA 358 Query: 337 LIAVI 341 +I +I Sbjct: 359 VIKII 363 >gi|290894088|ref|ZP_06557061.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556343|gb|EFD89884.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 345 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNTILTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 >gi|325290064|ref|YP_004266245.1| protein of unknown function UPF0118 [Syntrophobotulus glycolicus DSM 8271] gi|324965465|gb|ADY56244.1| protein of unknown function UPF0118 [Syntrophobotulus glycolicus DSM 8271] Length = 349 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 13/215 (6%) Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIA---LFFFYRDGFS 183 + +K+ E + G FA+R+ + FL+ +S+ +++++ +F D Sbjct: 119 EVIKLYDEKIIYAQG------FATRWLVNFLNDIPGILVSLTYLVLSPVLAIYFLADWRR 172 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++Q + L + W+ + + + +I + G I A+ G+++G L G + Sbjct: 173 MTQTMIWLVPRKYRNSWRHLLKEINLIIVNYIHGNLIDAVLVGVIIGIGAALLGTEYALL 232 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +G+I I +IP P+ S+ L + + A + + I I + P L+ Sbjct: 233 IGIICGITNIIPYFGPLIGAVPSLMLALSNSPIMAVKILVLILIVQQIDGNLINPKLMSD 292 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L L F L+ G + GLLG+ + L A++ Sbjct: 293 KVGLRPLTVVFSLLAGEKLAGLLGMLVAIPLTAIM 327 >gi|167040126|ref|YP_001663111.1| hypothetical protein Teth514_1488 [Thermoanaerobacter sp. X514] gi|307724555|ref|YP_003904306.1| hypothetical protein Thet_1415 [Thermoanaerobacter sp. X513] gi|166854366|gb|ABY92775.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X514] gi|307581616|gb|ADN55015.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X513] Length = 341 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 74/335 (22%), Positives = 135/335 (40%), Gaps = 44/335 (13%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-----TFLAVIATVSVMCLFIVPLLFL 81 +K +P + +I + P+ F SK S FL V + + +IVPLL Sbjct: 29 IKNILSPFFVSALIAYLLNPMVKFFNSKGFSISLSILLVFLIVASGILFFSFYIVPLLIN 88 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSET 139 + +L+M +P + +I + +L +LS+ PQ K+L + Sbjct: 89 EFIALLQM----------------IPFYAEEIQKLLI--QLKFNYLSYLPPQVEKVLDKN 130 Query: 140 FLKTNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 N F S F + L + II + I F+F +D ++++ + + Sbjct: 131 LGSLNN-AFTYHIDSAFKSVITILKDAVDIIIIPIVTFYFLKDKKVFKEEIERILPQKYS 189 Query: 198 AYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + KKI +I+ K +R+ T +AI + L L V +GV+ I+ + Sbjct: 190 TKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLS----LIKVKYAFLIGVLAGILNI 245 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT----LRPFLVGGPIKLPF 309 IP PI +SI + + ++ W I +V + + P ++ + L Sbjct: 246 IPYVGPI----LSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFITPKIMSDSVGLHP 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F L+ G G+ GL + ++A+I I E Sbjct: 302 VTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIE 336 >gi|296447406|ref|ZP_06889332.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296255109|gb|EFH02210.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 360 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFL---GMTIIAIGEGLVLGSA 232 YR+G S LFP W+ ++ + V R+ L G I + G + G A Sbjct: 169 LYREGLS----------RLFPREWRGEVEETIDTVARALRLWLFGQLIEMVIIGAMSGVA 218 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPI 260 WL G+PS +ALGV+ + +P PI Sbjct: 219 VWLIGLPSALALGVVAGVAEFVPYLGPI 246 >gi|116252884|ref|YP_768722.1| transmembrane transporter protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257532|emb|CAK08629.1| putative transmembrane transporter protein [Rhizobium leguminosarum bv. viciae 3841] Length = 368 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 7/116 (6%) Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAM--IPGGAPISFT-AVSIYLLIKGNIFNATCL 281 + +++G ++ G+P+ AL ++T ++A+ IP P+ T V Y+ + A Sbjct: 232 QSMLVGIGFFAIGLPAAGALTLVTFLLAVVQIP---PLLLTLPVMAYVFVTEATTPAIIF 288 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +W + D L+P ++G +P G++GG+ GLLG+F+GPVL+A+ Sbjct: 289 AIWSFFA-GLSDNLLKPLMLGRGSDVPMPVILVGVIGGMIADGLLGIFVGPVLLAV 343 >gi|42518755|ref|NP_964685.1| hypothetical protein LJ0830 [Lactobacillus johnsonii NCC 533] gi|41583041|gb|AAS08651.1| hypothetical protein LJ_0830 [Lactobacillus johnsonii NCC 533] Length = 393 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLG-EHLFPAYWKKISRIVPKVIRSTFLG 217 +++IFM + LFF +DG ++ + + L P++ +S I + S G Sbjct: 181 VITMIFMTLLTAPFVLFFMLKDGHRLNSYVTKFAPKKLQPSFSSLLSDI-NGAVASYIRG 239 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A G++ Y + G+ + L V+ I+ MIP G I+F I LI + Sbjct: 240 QITVAFWVGVMFAIGYSVIGLNYGITLAVLAGILNMIPYFGTFIAFIPAIILGLISSPMM 299 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L ++ AIE + + + P ++G + + + T L+G GL G+ + A Sbjct: 300 LIKVLIVF-AIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGLWGVIFAIPVYA 358 Query: 337 LIAVI 341 +I +I Sbjct: 359 VIKII 363 >gi|148974917|ref|ZP_01811897.1| hypothetical membrane spanning protein [Vibrionales bacterium SWAT-3] gi|145965426|gb|EDK30675.1| hypothetical membrane spanning protein [Vibrionales bacterium SWAT-3] Length = 355 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 2/190 (1%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + AS G + + II IIA F + + L L ++ ++ Sbjct: 150 FATKAASILGSLGGGFIQFIISTIIA-GAFMSNADKCQTGVTHLVARLTDGKGVELVQLS 208 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +RS G+ +A+ + ++ +AGVP+ + ++A+I ++ I Sbjct: 209 KSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAAMWALAVLLIAIIQLPPILALLPAII 268 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 Y+ + A+ +W I + D L+P L+ +P L G +GG+ G++G Sbjct: 269 YMFSVESTLAASFFLVW-CILVSGSDAILKPMLLSRGSHIPMLVILLGALGGMAMSGIVG 327 Query: 328 LFIGPVLMAL 337 LF+G V+++L Sbjct: 328 LFVGAVILSL 337 >gi|146300706|ref|YP_001195297.1| hypothetical protein Fjoh_2957 [Flavobacterium johnsoniae UW101] gi|146155124|gb|ABQ05978.1| protein of unknown function UPF0118 [Flavobacterium johnsoniae UW101] Length = 366 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 87/190 (45%), Gaps = 10/190 (5%) Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSI--SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + LD + II+ LF Y++ F + ++ + + +I + I S + Sbjct: 153 VLLDSTIIIIYTF--LFLIYKEHFKLFLAKLISKENHSVLKDILSQIKVSINNYIVSLII 210 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 M ++++ GL L W+ G+ + LG+IT I+ +IP + +++ + G+ Sbjct: 211 EMIVVSVLTGLGL----WIIGIKYFILLGLITGILNLIPYIGILVAGIITVLASLTGSAE 266 Query: 277 NATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + L + I FI + L P ++ +++ + G++ G G+ G+F+ L Sbjct: 267 ISMILGILIVNIIVQFIDNNLLVPLIINTKVEINAFVSIMGIIVGGAAAGISGMFLAIPL 326 Query: 335 MALIAVIWKE 344 +A++ +I+ Sbjct: 327 LAILKIIFDR 336 >gi|164688257|ref|ZP_02212285.1| hypothetical protein CLOBAR_01902 [Clostridium bartlettii DSM 16795] gi|164602670|gb|EDQ96135.1| hypothetical protein CLOBAR_01902 [Clostridium bartlettii DSM 16795] Length = 391 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 10/179 (5%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVP--KVIRSTFLGMTIIAIGEGLVLGSAYWLA---- 236 +S QL L P K + ++V K+ TF E L+LGS +++ Sbjct: 209 KLSVQLKKLLYAFLPE--KIVDKMVEVGKLTHKTFTNFFTYQCIECLILGSMFFVTMVIL 266 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + + V+ IMA+IP G I+F SI L++ N + A+ I Sbjct: 267 KIPYALLISVMITIMALIPIFGLCIAFIIASI-LIVMVNPIKVIVFAILFAVLQQIEGNL 325 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P +VG I LP + F + G + MG++G+ + L ++I + ++S+ +N++ Sbjct: 326 IYPRVVGKSIGLPPIWVIFVITLGSKLMGIVGMILFIPLSSVIYTLLRKSVYKRIQNRK 384 >gi|303239293|ref|ZP_07325821.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] gi|302593079|gb|EFL62799.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] Length = 360 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 23/157 (14%) Query: 211 IRSTFLGMTI----IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISF 262 IR+ + M+I ++IG G++ GV ++ LG++ +I+ +P GG I + Sbjct: 214 IRAQLILMSITFVELSIGFGII--------GVRQNLLLGLLVSIIDALPILGTGGVLIPW 265 Query: 263 TAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 SIY I G+I + + L+G + +V + + P ++G I L L T + G+R Sbjct: 266 ---SIYNFITGDIRMGISLIILYGVV--LVVRQMIEPKVLGQQIGLHPLVTLLSMYVGLR 320 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+ IGP+ + L+ I + I K KE + Sbjct: 321 VFSFIGMIIGPITILLLKNIL-QGIFKKKSFKEYVKE 356 >gi|94967597|ref|YP_589645.1| hypothetical protein Acid345_0566 [Candidatus Koribacter versatilis Ellin345] gi|94549647|gb|ABF39571.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 394 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 4/170 (2%) Query: 176 FFYRDGFSISQQLDSL-GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F +D + L ++ GE ++ ++ V ++ ++AI GLV +A Sbjct: 203 FLLKDKRDLRLSLQNIVGEPRKREFFGQLITDVDAMLSQFVRAQLLLAIISGLVYTAALS 262 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIV 292 + VP LG + ++ +P P + AV I + G N + + ++ + + Sbjct: 263 VLQVPYAYILGAVGGLLEFVPLVGP-AIAAVGIVGVCFGTPNFHHTLWVVVFLGVWRLLQ 321 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 D + P L+GG ++L L T FG++ G G+LG+++ +MA I +++ Sbjct: 322 DYVISPRLLGGKVELHPLLTIFGVLAGGEVAGVLGIYLSVPVMATIRILF 371 >gi|311032815|ref|ZP_07710905.1| hypothetical protein Bm3-1_20134 [Bacillus sp. m3-13] Length = 355 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 7/246 (2%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V ++ D P + +E TK L + ++S K G+ F+ + R G Sbjct: 100 VVQFAEDFPAFLEKNEEQTKELMDDNNFGLISYEEAKKRGLAFLKEQSQRIGENVSSIIS 159 Query: 166 SI-----IFMIIA--LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 SI I +++ LF+F +DG + + + + K++ + K + + G Sbjct: 160 SITNFVTILVVVPFILFYFLKDGHKLLPFILKMLPNKHHDEGKRLLTDIDKTLSTYIGGQ 219 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 I+A+ G ++ Y + G+ + L + I A++P P ++ + + + F Sbjct: 220 MIVALVNGFLMYIGYLIIGLDYALVLALFIVITAVVPIIGPALGVLPAVIIGLMTDPFMV 279 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + AI I + P ++G + + L L+ + G +G+ + + +++ Sbjct: 280 VKILILLAIVQQIEGNLVSPQIIGNKLSIHPLTVILLLLAAGKLYGFIGILLAVPVYSVL 339 Query: 339 AVIWKE 344 V+ K Sbjct: 340 KVVTKN 345 >gi|229087925|ref|ZP_04220036.1| hypothetical protein bcere0022_44800 [Bacillus cereus Rock3-44] gi|228695393|gb|EEL48267.1| hypothetical protein bcere0022_44800 [Bacillus cereus Rock3-44] Length = 342 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 6/145 (4%) Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + KK +R KVI + FL IAI ++ A W+ G P + L ++ ++ +IP G Sbjct: 190 FGKKFARSFGKVIEAQFL----IAIVNCVLSVIALWVLGFPQLLGLALMIFLLGLIPVAG 245 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 IS + + G+I + + A+ + L P + LP TF L+ Sbjct: 246 VIISLVPLCMIAYNIGSITYVVYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLI 305 Query: 318 GGVRTMGLLGLFIG-PVLMALIAVI 341 +G+ GL IG PV M L+ V+ Sbjct: 306 FSEHFLGVWGLIIGIPVFMFLLDVL 330 >gi|226310975|ref|YP_002770869.1| hypothetical protein BBR47_13880 [Brevibacillus brevis NBRC 100599] gi|226093923|dbj|BAH42365.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 376 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 4/111 (3%) Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKT 295 V + +G+IT ++ ++P G F IY+ KGN L L+G + +F + Sbjct: 255 VEYAITIGLITGLVDLLPYLGTGTVFVPWIIYMFFKGNYTMVIGLSILYGVVLIF--RQI 312 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P +V + L L T L G++ G LGL IGPV + +I + K ++ Sbjct: 313 IEPKVVAENVGLDPLLTLVALFVGLQLFGFLGLIIGPVSLVMINALVKANV 363 >gi|224372723|ref|YP_002607095.1| acid membrane antigen A [Nautilia profundicola AmH] gi|223589133|gb|ACM92869.1| acid membrane antigen A [Nautilia profundicola AmH] Length = 332 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 15/179 (8%) Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGL 227 +I +FFF+ + +++ + + P K++ ++ +V+ F AI EG+ Sbjct: 146 LIVIFFFFATLYG--KEIMEFFKKVIPLEEKQLEKLFFGTSEVMSVVFYSTVFTAILEGI 203 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G + G + ++ A ++IP G I + VS+YL GN A + L+ Sbjct: 204 LFGIIAKVYGF-NFFFFTIMYAFSSLIPVIGGVIMWGPVSLYLYSIGNTTGAVVVALYSI 262 Query: 287 IELFIV-DKTLRPFLV-------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 I + I+ D ++P ++ +L L FF +V G+ + GL G+ IGP + A+ Sbjct: 263 IVISIIADTFIKPIIIEFVKKTFDADTELNSLLIFFSIVAGLSSFGLWGIIIGPAVTAM 321 >gi|303229262|ref|ZP_07316057.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] gi|303231297|ref|ZP_07318033.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302514027|gb|EFL56033.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302516035|gb|EFL57982.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] Length = 373 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 54/268 (20%), Positives = 108/268 (40%), Gaps = 50/268 (18%) Query: 121 ELWTKHLSHPQSLKILSETFLKTNG---IDFIPRFASRFGM-------IFLDYCLSIIFM 170 + W HLS+ L NG +++ + ++ G L + ++I Sbjct: 124 QQWIYHLSNTVPLASNPTVLNTLNGESIVNYTREWGTKGGTYVVNTMGTILSWTVNIALG 183 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAY----WKK----ISRIVPKVIRSTFLGMTIIA 222 +I + D ++L S G+ + AY W ++++ + S F+G I A Sbjct: 184 LIFAIYMLLD----KERLMSQGKRILKAYASDTWVNRVTYVAKVAVQTFSSFFVGQFIDA 239 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G+++G W+ + + + + +IP V IY+ G + A L Sbjct: 240 LILGIMVGVTLWICNISYATTIACVIGLTGLIP--------LVGIYV---GGLMGAVILL 288 Query: 283 LWGAIELFIV-----------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 ++ I + P +VG + LP L F ++ G MG+ G+ IG Sbjct: 289 TISPMDALIYVIILEVLHQIESNVIYPKIVGNSVGLPGLWVFAAVIIGGSLMGVTGMIIG 348 Query: 332 PVLMALIAVIWKESIMAIKENKEKISSN 359 + L+A +K + + + +E+++SN Sbjct: 349 ---VPLVATCYK---LLMTDVEERLASN 370 >gi|255531139|ref|YP_003091511.1| hypothetical protein Phep_1233 [Pedobacter heparinus DSM 2366] gi|255344123|gb|ACU03449.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 370 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 9/147 (6%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++I I+ K I FL M I+ + ++ W+ V V LG+I+ I ++P Sbjct: 194 RQIQYIIKKYITGLFLQMFIVTV----LMIFTLWVLNVKYAVLLGLISGIFNIVPYLGI- 248 Query: 261 SFTAVSIYLLIKGNIFNAT--CLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLV 317 FTA+ I +LI A L L + + +D L P +VG +K+ L F G+V Sbjct: 249 -FTALLISVLITFATAGAAKVLLVLIAFVSIHALDGNVLMPLVVGSKVKINALFAFIGIV 307 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G G+ G+F+ +A++ +I+ + Sbjct: 308 VGEMIWGISGMFLCIPYLAMLKIIFDK 334 >gi|153841626|ref|ZP_01993425.1| membrane protein [Vibrio parahaemolyticus AQ3810] gi|149745457|gb|EDM56708.1| membrane protein [Vibrio parahaemolyticus AQ3810] Length = 144 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 5/144 (3%) Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN 274 +G + AI +GL G WLAG P + G + + IP G + + + YL + G+ Sbjct: 1 MGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFIPVVGTALIWIPAAAYLFLTGD 59 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + A L W + + +D LRP L+ G + L FF L+GG+ GL+GL GP++ Sbjct: 60 MTWAIFLTAWSVVIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLI 119 Query: 335 MALIAV---IWKESIMAIKENKEK 355 A+ V I++E ++ Sbjct: 120 FAVTMVLFNIYEEEFKDFLNQQDN 143 >gi|37521449|ref|NP_924826.1| hypothetical protein glr1880 [Gloeobacter violaceus PCC 7421] gi|35212446|dbj|BAC89821.1| glr1880 [Gloeobacter violaceus PCC 7421] Length = 351 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 15/200 (7%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGM 218 FL ++ I +++ FF DG I L PA + + S+ V F G Sbjct: 161 FLGSYVTFIVIVVVAFFMLADGGRIWGLLI----KFLPAAQRVRFSQSVQSNFAGFFQGQ 216 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 +IA+ G + L +P + L + A+ +IPG GA + V + +L++G+ + Sbjct: 217 LLIALFLGTASFVVFTLLQIPFALVLAITVALFDLIPGIGATLGVGLVCLTVLVQGD-WV 275 Query: 278 ATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLM 335 AT I L V D + P ++ + L + FF L+ G R GL+G+F+ PV Sbjct: 276 ATLKLFAACIALQQVQDNFIAPRVMQSTVNLNPVIVFFALLVGARIGGLIGVFLAVPVAG 335 Query: 336 ALIAVIWKESIMAIKENKEK 355 ++ S++ ++E + K Sbjct: 336 VVV------SLLDVEEAQSK 349 >gi|311280807|ref|YP_003943038.1| hypothetical protein Entcl_3510 [Enterobacter cloacae SCF1] gi|308750002|gb|ADO49754.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 369 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 19/143 (13%) Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-- 262 ++ IR+ G+ +A+ + L+ G LAG+P A+G+ I+A+I G A I Sbjct: 213 KLCTSTIRAVAQGVIGVALIQALLAGVVMALAGIP---AVGIFF-ILALILGIAQIPVIL 268 Query: 263 -TAVSIYLL-------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 TA +I ++ NI L + G + D L+P ++G + P Sbjct: 269 VTAPAIAIMWHMGDHGTGLNIIYTVLLLIAG-----MADNVLKPLMLGRGVDAPMPVVLL 323 Query: 315 GLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ G+LG+FIG L+++ Sbjct: 324 GALGGMAASGILGMFIGATLLSI 346 >gi|327472814|gb|EGF18241.1| permease [Streptococcus sanguinis SK408] Length = 365 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 20/244 (8%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL-FIGPVLMALIA 339 + ++ ++L I + P +VG + LP L T + G GL+G+ F P+ A Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIF----A 342 Query: 340 VIWK 343 VI++ Sbjct: 343 VIYR 346 >gi|320352586|ref|YP_004193925.1| hypothetical protein Despr_0453 [Desulfobulbus propionicus DSM 2032] gi|320121088|gb|ADW16634.1| protein of unknown function UPF0118 [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 11/202 (5%) Query: 160 FLDYCLSIIFMIIALFFFYR-DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 F D+C+ I+ + L ++R F + +L L E K S I ++ +G Sbjct: 163 FFDFCILIVCIYFLLIEYHRLTAFLL--KLSPLPEAQNRLLIDKFSSIAGTIL----IGN 216 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN 277 + + +G++ G + G+ S V GV+ ++A +P G + ++ +KG + Sbjct: 217 GLSGLIQGVLGGIFFAAMGLVSPVLWGVVMGVLAFLPILGVGLVLLPTTLIFFLKGKFWQ 276 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A ++ ++ +P VG +LP + ++GG+ G+LG+ GP +A+ Sbjct: 277 AVVTLVFYLFLTVFIEYMFKPKFVGAQAQLPPILVLLSIIGGMSISGVLGIIYGP--LAV 334 Query: 338 IAVIWKESIMAIKENKEKISSN 359 A + S M ++E + + S Sbjct: 335 TAFL-TLSDMYVREYQPYLDSR 355 >gi|195978343|ref|YP_002123587.1| hypothetical protein Sez_1234 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975048|gb|ACG62574.1| hypothetical protein Sez_1234 [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 393 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 15/232 (6%) Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S L S Q +++F K N ID+ FA I ++II LF+F Sbjct: 145 YRSNLQDMLTSMSQKALDYAQSFSK-NAIDWAGNFAGAIARI----TVAIIMSPFILFYF 199 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAY 233 RD + L ++ P ++ ++R+ + K + G +AI GL+ + Sbjct: 200 LRDSGHMKNGL----VNVLPIKLRQPMARVLGEINKQLSGYVQGQVTVAIVVGLMFSVMF 255 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L G+ + G+I + MIP G+ ++ V I +++G + L ++ IE I Sbjct: 256 SLVGLNYSITFGIIAGFLNMIPYLGSFLAMIPVVIMGMVQGPLMLIKVLIIF-VIEQTIE 314 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P ++G + + + F L+ G+ G+F+ + A + V+ KE Sbjct: 315 GRFVAPLVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPVYASVKVVVKE 366 >gi|327459398|gb|EGF05744.1| permease [Streptococcus sanguinis SK1] Length = 365 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 20/244 (8%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V +WL G + +S+L K L+ K L + + I + IF ++ Sbjct: 117 VAKWLQQ-SGLLSSSQL--KDLT-----KQLQNSDIVNRAISLLGSLTGNISAIFGNF-F 167 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTII 221 S+I I +F F + L + L P K V VI T+ +G I Sbjct: 168 SVIMSIFLMFAFLSSKEHLQTITSRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIE 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TC 280 A+ G+++ AY L G+P GV+ +++ IP P S A+ + + + A Sbjct: 228 AVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLS 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL-FIGPVLMALIA 339 + ++ ++L I + P +VG + LP L T + G GL+G+ F P+ A Sbjct: 288 IAVFQGVQL-IEGNVIYPRVVGQSVGLPTLFTLAAALIGGNLFGLVGMIFFTPIF----A 342 Query: 340 VIWK 343 VI++ Sbjct: 343 VIYR 346 >gi|297544522|ref|YP_003676824.1| protein of unknown function UPF0118 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842297|gb|ADH60813.1| protein of unknown function UPF0118 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 341 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 44/335 (13%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K +P A ++ + P+ F SK STF +++ ++ L I L+F FY Sbjct: 29 IKNILSPFFIAGLVAYLLNPMVKFFNSKG--LSTFFSILLVFLIVTLGI--LIFSFYIFP 84 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSETFLKTN 144 L + E+++ + + +P ++ ++ + +L + S+ PQ K+L + N Sbjct: 85 LMINEMIAFITM-------IPFYIEELQNILI--QLKFNYFSYLPPQFEKVLDKNLNTLN 135 Query: 145 GIDFIPRFASRFGMIF------LDYCLSIIFMIIALFFFYRDGFSISQQLD----SLGEH 194 + FASR M F L + I + I F+F +D ++++ S Sbjct: 136 NL-----FASRVDMAFKSTVAILKNVIDAILVPIITFYFLKDKNLFKKEIEKIIPSKYHS 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F +KI +I+ K IR+ ++I G++ L + +G++T ++ +I Sbjct: 191 SFFTLLRKIDKILSKYIRAQ----IYLSIFVGILTSIGLSLIKIKYAFLVGLLTGVLNII 246 Query: 255 PGGAPISFTAVSIYL-----LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 P PI ++ L L KG CL + FI K L + PI Sbjct: 247 PYIGPILSIIPAVLLGFLDSLSKGIWALVVCLLVQQIENAFITPKILSDSVGLHPIT--- 303 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ G G+ GL + ++A++ + E Sbjct: 304 --VIFSLIAGGELFGIWGLLLSVPIVAIVKAVVTE 336 >gi|225870739|ref|YP_002746686.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225700143|emb|CAW94274.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 393 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 15/232 (6%) Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S L S Q +++F K N ID+ FA I ++II LF+F Sbjct: 145 YRSNLQDMLTSMSQKALDYAQSFSK-NAIDWAGNFAGAIARI----TVAIIMSPFILFYF 199 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAY 233 RD + L ++ P ++ ++R+ + K + G +AI GL+ + Sbjct: 200 LRDSGHMKNGL----VNVLPIKLRQPMARVLGEINKQLSGYVQGQVTVAIVVGLMFSVMF 255 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L G+ + G+I + MIP G+ ++ V I +++G + L ++ IE I Sbjct: 256 SLVGLNYSITFGIIAGFLNMIPYLGSFLAMIPVVIMGMVQGPLMLIKVLIIF-VIEQTIE 314 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P ++G + + + F L+ G+ G+F+ + A + V+ KE Sbjct: 315 GRFVAPLVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPVYASVKVVVKE 366 >gi|300864368|ref|ZP_07109241.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337643|emb|CBN54387.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 345 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 16/218 (7%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ-QLDS 190 +L+++ E L+T + I + +F + ++ IF+ FF DG + Q L+ Sbjct: 131 NLRVIEEQ-LRTQALGGIVSSITLLQTVFTN-VITFIFITAVSFFMLLDGERLWQLMLNF 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L +HL + + I R FLG I L L +A ++ + +V +I A+ Sbjct: 189 LPKHLHRRFARTIER--------NFLGFFQAQIILMLFLVTASFIVLLILNVRFALILAV 240 Query: 251 M----AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IPG A+ ++++ N + A + + I I D + P ++ + Sbjct: 241 ILGAFDLIPGIGATLGIALVFFIVLAQNYWLAFKVLIACIILQQIQDNIIHPRIMKNSLN 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + FF L+ G R GLLG+F+ L +I V W E Sbjct: 301 LNPVVVFFALLVGARAAGLLGIFLAIPLAGVI-VSWFE 337 >gi|315282307|ref|ZP_07870742.1| membrane protein YdbI [Listeria marthii FSL S4-120] gi|313614043|gb|EFR87752.1| membrane protein YdbI [Listeria marthii FSL S4-120] Length = 345 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 30/163 (18%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ + A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAFLTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLIPLTI 252 Query: 268 ------------YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 Y+LI + + A+E ++ L P L+ LP TF Sbjct: 253 IGYSIGGVEYIFYILI--------VVIIIHALESYV----LNPKLMSAKTNLPVFYTFII 300 Query: 316 LVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 301 LIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 >gi|257792294|ref|YP_003182900.1| hypothetical protein Elen_2556 [Eggerthella lenta DSM 2243] gi|317490215|ref|ZP_07948703.1| hypothetical protein HMPREF1023_02403 [Eggerthella sp. 1_3_56FAA] gi|257476191|gb|ACV56511.1| protein of unknown function UPF0118 [Eggerthella lenta DSM 2243] gi|316910709|gb|EFV32330.1| hypothetical protein HMPREF1023_02403 [Eggerthella sp. 1_3_56FAA] Length = 429 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 24/165 (14%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 +P ++ I G W ++L+T++ Q+ + +T++ N +D I +AS F + + Sbjct: 112 IPGYVQTIAG--WGNDLYTRYADVLQNDTV--QTWIN-NALDAIVSWASTFARDSANGVV 166 Query: 166 SI----IFMIIALFFFYRDGFSISQQLDSLGEHLF----PAYWKKI-------SRIVPKV 210 +I + +AL F F I +L LG P + + +R++ Sbjct: 167 AIGTGLVNTFVALGFALVVAFWILMELPQLGRECMRLVNPKRHEDLEMLHVTFTRVMGGY 226 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 I+ T L II +G ++ G+ G+P++ ALG I ++ +IP Sbjct: 227 IKGTLLQCAIIGVGCVVLFGAI----GIPNYAALGGIAGLLNIIP 267 >gi|329120004|ref|ZP_08248676.1| permease [Neisseria bacilliformis ATCC BAA-1200] gi|327463917|gb|EGF10231.1| permease [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 8/169 (4%) Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + +L F + +ISR + V+ G ++ + GLV G+ L G+ S A+ Sbjct: 181 SHGIRALIPRRFIDTYTRISREMDDVLGEFLRGQLMVMLIMGLVYGTGLMLTGLDSGFAI 240 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA--TCLFLWG--AIELFIVDKTLRPF 299 G+I I+ +P GA FT + + + FN+ + +W A+ F+ + P Sbjct: 241 GMIAGILVFVPYLGA---FTGLLLATVAALLQFNSWHGMVAVWSVFAVGQFLESFFITPK 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +VG I L F L+ + MG +G+ +G L A+ V+ +E A Sbjct: 298 IVGDRIGLSPFWVIFSLMAFGQLMGFVGMLVGLPLAAVCLVLLREGSQA 346 >gi|325833632|ref|ZP_08166081.1| putative membrane protein [Eggerthella sp. HGA1] gi|325485556|gb|EGC88025.1| putative membrane protein [Eggerthella sp. HGA1] Length = 429 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 24/165 (14%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 +P ++ I G W ++L+T++ Q+ + +T++ N +D I +AS F + + Sbjct: 112 IPGYVQTIAG--WGNDLYTRYADVLQNDTV--QTWIN-NALDAIVSWASTFARDSANGVV 166 Query: 166 SI----IFMIIALFFFYRDGFSISQQLDSLGEHLF----PAYWKKI-------SRIVPKV 210 +I + +AL F F I +L LG P + + +R++ Sbjct: 167 AIGTGLVNTFVALGFALVVAFWILMELPQLGRECMRLVNPKRHEDLEMLHVTFTRVMGGY 226 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 I+ T L II +G ++ G+ G+P++ ALG I ++ +IP Sbjct: 227 IKGTLLQCAIIGVGCVVLFGAI----GIPNYAALGGIAGLLNIIP 267 >gi|76801595|ref|YP_326603.1| permease [Natronomonas pharaonis DSM 2160] gi|76557460|emb|CAI49038.1| predicted transporter (predicted permease) [Natronomonas pharaonis DSM 2160] Length = 414 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 VS+YL + A L ++G++ + + D RP L+G L G+ GG+ G Sbjct: 257 VSVYLAVADRPTAAALLVVYGSL-VSLSDNYFRPALIGRSGALNPAIIVVGIFGGIVAFG 315 Query: 325 LLGLFIGPVLM 335 +GLFIGPV++ Sbjct: 316 AVGLFIGPVVL 326 >gi|16331485|ref|NP_442213.1| hypothetical protein sll0063 [Synechocystis sp. PCC 6803] gi|8928467|sp|Q55147|Y063_SYNY3 RecName: Full=UPF0118 membrane protein sll0063 gi|1001141|dbj|BAA10283.1| sll0063 [Synechocystis sp. PCC 6803] Length = 395 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 5/155 (3%) Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + K S + + ++ FLG + A L L S + L VP + G+ +MA+IP G Sbjct: 218 FQKPFSDTLRRSFQNYFLGQLVSATCMALGLISGFLLLKVPFGLLFGLTVGVMALIPFGG 277 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + V+ +L+ +I A L + IV+ + P ++G L L+ Sbjct: 278 SVGIVLVT-FLVALRDIGMALQLLAVALVIQQIVENGIAPRVLGSVTGLNPFWVLISLLT 336 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G R GLLG+ + AV+ KE++ AI+ K Sbjct: 337 GARIGGLLGVIVA----VPSAVMIKEALGAIRSMK 367 >gi|329667697|gb|AEB93645.1| permease [Lactobacillus johnsonii DPC 6026] Length = 393 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 164 CLSIIFMII-----ALFFFYRDGFSISQQLDSLG-EHLFPAYWKKISRIVPKVIRSTFLG 217 +++IFM + LFF +DG ++ + + L P++ +S I + S G Sbjct: 181 VITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKFAPKKLQPSFSSLLSDI-NGAVASYIRG 239 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A G++ Y + G+ + L V+ I+ MIP G I+F I LI + Sbjct: 240 QITVAFWVGVMFAIGYSVIGLNYGITLAVLAGILNMIPYFGTFIAFIPAIILGLISSPMM 299 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L ++ AIE + + + P ++G + + + T L+G GL G+ + A Sbjct: 300 LIKVLIVF-AIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGLWGVIFAIPVYA 358 Query: 337 LIAVI 341 +I +I Sbjct: 359 VIKII 363 >gi|295695749|ref|YP_003588987.1| protein of unknown function UPF0118 [Bacillus tusciae DSM 2912] gi|295411351|gb|ADG05843.1| protein of unknown function UPF0118 [Bacillus tusciae DSM 2912] Length = 355 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 68/323 (21%), Positives = 136/323 (42%), Gaps = 33/323 (10%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + ALII + P+ + + ++ V +S++ ++ + LL + + L Sbjct: 46 PFVVALIISYLLNPVVEALVKRR--------VPRGISILIIYAIFLLISAVAAVQGIPAL 97 Query: 93 VSKV--VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 V +V + AN +P + I W +EL + P ++ E N ++ + Sbjct: 98 VEQVKALAAN-----LPETVHRI--DQWLNELARQTRYLPDGIQQAVE-----NHLNQLE 145 Query: 151 RFASRF-GMIF------LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 R+A +F G + + LS + +F+ +D + + + SL +WKK+ Sbjct: 146 RWAGQFLGQVVASLGATVGQVLSAFVVPFLVFYLLKDLKMVERVVLSLAPREQRDFWKKL 205 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + + G ++ G++ + Y + G+P + + I A+ +IP P F Sbjct: 206 LQEIDDALGRYVRGQLLVMALVGVLTYAGYLIIGLPFSLLMASIVAVANIIPYVGP--FI 263 Query: 264 AVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ LI I A L L I I + P +VG + + L F L+ G + Sbjct: 264 GLAPAALIGLTISPAMALKVLLVNLIVQQIESNFISPAVVGRSLDIHPLAIIFALLLGGQ 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 G+ G+ ++A++ VIW+ Sbjct: 324 LAGIAGMVFAVPVLAVLRVIWQH 346 >gi|254478928|ref|ZP_05092290.1| sporulation integral membrane protein YtvI [Carboxydibrachium pacificum DSM 12653] gi|214035150|gb|EEB75862.1| sporulation integral membrane protein YtvI [Carboxydibrachium pacificum DSM 12653] Length = 349 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 20/235 (8%) Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFY 178 ++S P ++ L E+ +++ ++++ FA L++ + + ++A FF Sbjct: 118 YISLPPNITSLIESNMQS-ILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFIS 176 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----MTIIAIGEGLVLGSAYW 234 +D Q + + P++W + ++ + + TF G + I + L + Sbjct: 177 KD----KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLA 232 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G LG++ I+ +P G + +++K + L L+G + +V Sbjct: 233 IIGFDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLV--VVV 290 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VG I L L T + GV+ G +GL IGPV + + + K I+ Sbjct: 291 RQMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKALQKAEII 345 >gi|52549442|gb|AAU83291.1| Htr-like protein [uncultured archaeon GZfos27E6] Length = 367 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 72/366 (19%), Positives = 138/366 (37%), Gaps = 58/366 (15%) Query: 1 MRETMLNPQGIMRWMIMFIILVSL--YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 +RE N + W I+ +I ++L Y L F ++ + I + + P+YS F ++ + Sbjct: 3 LREKTRNK---LYWQILGLISIALLAYMLFPFLDVLIYGIFIYYVARPMYSKF-DRRVKH 58 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----------VLANQHGIPVPR 108 + A I+ V+ ++ +F +E+ +S+V + N GI Sbjct: 59 KSVGAFISLFFVVLPIVLISIFTLSIAYIELSTFLSQVDFGHMGYVNELFKNFEGIAANI 118 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 DI + + W L+ + S+ F K F+D + Sbjct: 119 KQGDISTLISQGDTWVLILTQ---ITKFSDIFFK-----------------FIDVLFRLF 158 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F+ D + + + P KK V I + + G + A+ L+ Sbjct: 159 LTFAIAFYLLTDATKLREWITDTFLGGKPELTKKFFDEVDSDIHTVYFGNILTAVLTALI 218 Query: 229 LGSAYWLAG--------VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 +WL +P + + ++ + IP G + + ++IYL+I+ + N Sbjct: 219 AAVIFWLLNLVAPPQLLIPYPILMAILCGLGIFIPLVGMKLVWVPLAIYLVIQAYL-NGI 277 Query: 280 CLFLWGAIEL----------FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 W I L F D LRP++ G + F + G+ G +GLF Sbjct: 278 LFTDWWFILLFLVVVFVVVDFAPDIALRPYISGKHVHAG--TMLFAYIFGIAVFGFVGLF 335 Query: 330 IGPVLM 335 +GP+++ Sbjct: 336 LGPMIL 341 >gi|20806564|ref|NP_621735.1| permease [Thermoanaerobacter tengcongensis MB4] gi|20515003|gb|AAM23339.1| predicted permease [Thermoanaerobacter tengcongensis MB4] Length = 354 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 20/235 (8%) Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFY 178 ++S P ++ L E+ +++ ++++ FA L++ + + ++A FF Sbjct: 123 YISLPPNITSLIESNMQS-ILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFIS 181 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----MTIIAIGEGLVLGSAYW 234 +D Q + + P++W + ++ + + TF G + I + L + Sbjct: 182 KD----KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLA 237 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G LG++ I+ +P G + +++K + L L+G + +V Sbjct: 238 IIGFDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLV--VVV 295 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VG I L L T + GV+ G +GL IGPV + + + K I+ Sbjct: 296 RQMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKALQKAEII 350 >gi|253752195|ref|YP_003025336.1| hypothetical protein SSUSC84_1344 [Streptococcus suis SC84] gi|253754021|ref|YP_003027162.1| membrane protein [Streptococcus suis P1/7] gi|253755955|ref|YP_003029095.1| membrane protein [Streptococcus suis BM407] gi|251816484|emb|CAZ52120.1| putative membrane protein [Streptococcus suis SC84] gi|251818419|emb|CAZ56248.1| putative membrane protein [Streptococcus suis BM407] gi|251820267|emb|CAR46734.1| putative membrane protein [Streptococcus suis P1/7] gi|319758582|gb|ADV70524.1| hypothetical protein SSUJS14_1464 [Streptococcus suis JS14] Length = 388 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC-----------LSIIFMIIALFFF 177 P +L++L+ K N D I +A +F +++ ++I+ M LF+ Sbjct: 145 RPTALEMLN----KVN--DQIVAYAQKFSSSAVNWASNLISTASQIIVAILIMPFILFYL 198 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAY 233 RDG Q L+ P W++ I ++ V + + G +AI L+ + Sbjct: 199 LRDG----QYLNKHITQYLPTKWREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMF 254 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+ + LGV+ + +IP G+ ++ I LI G I L ++ IE I Sbjct: 255 SIIGLSYPITLGVMAGFLNLIPYLGSFLAMIPAVILGLIAGPIMLIKVLVVF-MIEQTIE 313 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + P ++G + + + F L+ + G+LG+ +G + A I V+ K + Sbjct: 314 GRFVTPLIIGSSLSIHPITILFVLLTAGQMYGVLGVLLGIPIYASIKVLVKAA 366 >gi|313623797|gb|EFR93928.1| membrane protein YdbI [Listeria innocua FSL J1-023] Length = 345 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAVLTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLIPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + + + K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEVNQPKDTIS 343 >gi|146319150|ref|YP_001198862.1| permease [Streptococcus suis 05ZYH33] gi|145689956|gb|ABP90462.1| Predicted permease [Streptococcus suis 05ZYH33] Length = 391 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC-----------LSIIFMIIALFFF 177 P +L++L+ K N D I +A +F +++ ++I+ M LF+ Sbjct: 148 RPTALEMLN----KVN--DQIVAYAQKFSSSAVNWASNLISTASQIIVAILIMPFILFYL 201 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAY 233 RDG Q L+ P W++ I ++ V + + G +AI L+ + Sbjct: 202 LRDG----QYLNKHITQYLPTKWREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMF 257 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+ + LGV+ + +IP G+ ++ I LI G I L ++ IE I Sbjct: 258 SIIGLSYPITLGVMAGFLNLIPYLGSFLAMIPAVILGLIAGPIMLIKVLVVF-MIEQTIE 316 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + P ++G + + + F L+ + G+LG+ +G + A I V+ K + Sbjct: 317 GRFVTPLIIGSSLSIHPITILFVLLTAGQMYGVLGVLLGIPIYASIKVLVKAA 369 >gi|223932565|ref|ZP_03624566.1| protein of unknown function UPF0118 [Streptococcus suis 89/1591] gi|302024193|ref|ZP_07249404.1| membrane protein [Streptococcus suis 05HAS68] gi|330833141|ref|YP_004401966.1| hypothetical protein SSUST3_1355 [Streptococcus suis ST3] gi|223898836|gb|EEF65196.1| protein of unknown function UPF0118 [Streptococcus suis 89/1591] gi|329307364|gb|AEB81780.1| protein of unknown function UPF0118 [Streptococcus suis ST3] Length = 388 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC-----------LSIIFMIIALFFF 177 P +L++L+ K N D I +A +F +++ ++I+ M LF+ Sbjct: 145 RPTALEMLN----KVN--DQIVAYAQKFSSSAVNWASNLISTASQIIVAILIMPFILFYL 198 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAY 233 RDG Q L+ P W++ I ++ V + + G +AI L+ + Sbjct: 199 LRDG----QYLNKHITQYLPTKWREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMF 254 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+ + LGV+ + +IP G+ ++ I LI G I L ++ IE I Sbjct: 255 SIIGLSYPITLGVMAGFLNLIPYLGSFLAMIPAVILGLIAGPIMLIKVLVVF-MIEQTIE 313 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + P ++G + + + F L+ + G+LG+ +G + A I V+ K + Sbjct: 314 GRFVTPLIIGSSLSIHPITILFVLLTAGQMYGVLGVLLGIPIYASIKVLVKAA 366 >gi|325684459|gb|EGD26623.1| permease [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 396 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 2/169 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG + L + K+ V + + S +G +AI G++L Y Sbjct: 192 LFFMLKDGHKLRPFLVKFAPQRWEQATSKLLHEVNQAVSSYVIGQVSVAICVGIMLFIGY 251 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G P AL + + + +IP G I I L+ A L ++ IE I Sbjct: 252 TIIGEPYGAALAICSGFLNLIPYFGTFIGLIPALIIALVTDLSMVAKVLVVF-FIEQIIE 310 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P +VG +K+ T ++G GL G+ G + A++ ++ Sbjct: 311 TRVISPLVVGNRLKMHPATTIIVMLGAGSVWGLWGVIGGIPIYAVMKIL 359 >gi|16800526|ref|NP_470794.1| hypothetical protein lin1458 [Listeria innocua Clip11262] gi|16413931|emb|CAC96689.1| lin1458 [Listeria innocua Clip11262] Length = 345 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAVLTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLIPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + + + K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEVNQPKDTIS 343 >gi|329117036|ref|ZP_08245753.1| putative membrane protein [Streptococcus parauberis NCFD 2020] gi|326907441|gb|EGE54355.1| putative membrane protein [Streptococcus parauberis NCFD 2020] Length = 393 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 8/175 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLG 230 LF+F RD + D + E L K I+R+ + K + G +AI G++ Sbjct: 196 LFYFLRDS---GKMKDGIVETLPTRLRKPIARVLGDINKQLSGYVQGQVTVAIIVGIMFS 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+ V G++ + M+P G+ ++ V I L++G + L ++ IE Sbjct: 253 IMFSIVGLKYSVTFGIVAGFLNMVPYLGSFLAMIPVVIMSLVQGPLMLVKVLIVF-TIEQ 311 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I + + P ++G + + + F L+ G+ G+F+ + A + V+ KE Sbjct: 312 TIEGRFVTPLVLGNKLSIHPITIMFLLLTAGAMFGVWGVFLVIPIYASVKVVVKE 366 >gi|257387204|ref|YP_003176977.1| hypothetical protein Hmuk_1144 [Halomicrobium mukohataei DSM 12286] gi|257169511|gb|ACV47270.1| protein of unknown function UPF0118 [Halomicrobium mukohataei DSM 12286] Length = 341 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 10/169 (5%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTII----AIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P ++ + R + + R+T + ++ A+G L+ + G P L + I+ Sbjct: 170 PEEYQSLVRTMHERTRNTLYAIYVLQGATALGTFLIAYLVFAGLGYPGAFGLAAVAGILQ 229 Query: 253 MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKLPFL 310 +P P I V+ ++ G++ A L + G + + F+ D +RP L +P Sbjct: 230 FVPVVGPSILIAVVAATDVVAGDLTGAATLLVIGLVFVGFLPDAIIRPQLAPYTADIPAS 289 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F G GGV ++G++G GP+++AL + E++ + + + Sbjct: 290 LYFIGFTGGVLSIGIVGFIAGPLVVAL----FVEAVELLTNERPTVQRQ 334 >gi|167036456|ref|YP_001664034.1| hypothetical protein Teth39_0025 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166855290|gb|ABY93698.1| protein of unknown function UPF0118 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 392 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 48/241 (19%), Positives = 102/241 (42%), Gaps = 32/241 (13%) Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFY 178 ++S P ++ L E+ +++ ++++ FA L++ + + ++A FF Sbjct: 161 YISLPPNITSLIESNMQS-ILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFIS 219 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----------MTIIAIGEGLV 228 +D Q + + P++W + ++ + + TF G +T + + GL Sbjct: 220 KD----KQLILDFIKRQIPSHWAQHAKSIQVNLLKTFFGYLRAVATIMLITFLEVSIGLA 275 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G LG++ I+ +P G + +++K + L L+G Sbjct: 276 M------IGFDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGL 329 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + +V + + P +VG I L L T + G + G LGL IGPV + + + + I Sbjct: 330 V--VVVRQIIEPKIVGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKALQRAEI 387 Query: 347 M 347 + Sbjct: 388 I 388 >gi|116492928|ref|YP_804663.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116103078|gb|ABJ68221.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 350 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 W+ GVP + + +I ++ ++P G IS +SI I + + + F Sbjct: 220 WIIGVPKLLLMAIIVFVLGLVPVAGVLISLIPLSIVAFSANGIISIAEVLCLVILIHFFE 279 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 L P L+ G LP TF L+ G + +G GL +G Sbjct: 280 SYFLHPRLMAGATDLPVFVTFITLIIGAKMLGTWGLIVG 318 >gi|16079795|ref|NP_390619.1| permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310678|ref|ZP_03592525.1| hypothetical protein Bsubs1_14976 [Bacillus subtilis subsp. subtilis str. 168] gi|221315001|ref|ZP_03596806.1| hypothetical protein BsubsN3_14892 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319922|ref|ZP_03601216.1| hypothetical protein BsubsJ_14803 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324203|ref|ZP_03605497.1| hypothetical protein BsubsS_14947 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312267|ref|YP_004204554.1| putative permease [Bacillus subtilis BSn5] gi|8928489|sp|O34472|YRRI_BACSU RecName: Full=UPF0118 membrane protein yrrI gi|2635187|emb|CAB14683.1| putative permease [Bacillus subtilis subsp. subtilis str. 168] gi|320018541|gb|ADV93527.1| putative permease [Bacillus subtilis BSn5] Length = 353 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 16/148 (10%) Query: 194 HLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L P W+K R V + G ++ + G++ G ++W+ G+P + LG+I+ Sbjct: 191 YLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLISG 250 Query: 250 IMAMIP------GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +IP G P A++I +K + +F I F+ L PF+VG Sbjct: 251 VTNVIPYFGPFIGAVPALLIAMTIS--VKAVLVVVITVF----ILQFMEGNILSPFIVGR 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 +K+ + L+ G G++G+ + Sbjct: 305 SLKMHPVVIMLALLAGGELAGIVGMILA 332 >gi|282165362|ref|YP_003357747.1| hypothetical protein MCP_2692 [Methanocella paludicola SANAE] gi|282157676|dbj|BAI62764.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 380 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 59/286 (20%), Positives = 111/286 (38%), Gaps = 44/286 (15%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 S VV Q + +S G + +L+ + S+ L + + T Sbjct: 110 SNVVSEIQRNFTMENIMSGNFGAIVPQDLYEALQGYGSSIANLQQLVIST---------- 159 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA-----------YWKK 202 G +D + +I+ +F+ R+ ++L S + FP+ Y + Sbjct: 160 ---GSTIVDIIFKLFLVIVIVFYMLRE----DEKLVSWLKSTFPSLMAEYDGMLLKYGRA 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA----GVPSHVALGVITAIMAMIP-GG 257 + + K+ L + AI V A +PS + +G++ + A++P G Sbjct: 213 VDEDLEKIFFGNILSIVFFAILAATVFSVLNMFAPPGMSIPSPILMGILCGVSALLPVVG 272 Query: 258 APISFTAVSIYLLI----KGNIFNATCLFLW--GAIELFIV---DKTLRPFLVGGPIKLP 308 I + +Y+L+ G F ++ AI +F+ D LRPF+ G + Sbjct: 273 MYIVIVPLLLYVLVISLMAGTFFPNIVFYIMMVAAIMIFVEVLPDFVLRPFMSSGRVHTG 332 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L F + G G+ GLFIG +++ L+ ++ + AI E Sbjct: 333 LL--MFAYILGPIVFGIAGLFIGAIVLVLLTHYFRIVVPAISRESE 376 >gi|312864862|ref|ZP_07725093.1| putative membrane protein [Streptococcus downei F0415] gi|311099989|gb|EFQ58202.1| putative membrane protein [Streptococcus downei F0415] Length = 388 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 29/260 (11%) Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ V++V+ N+ P+ L D W + +K + + +E F K Sbjct: 128 SVERQVNQVIADNRFEAIRPQ-LED-----WVNNYSSKAIGY-------AENFSKN---- 170 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK-ISRI 206 I +A F ++II M +F+ RD S +L FP W+K +SRI Sbjct: 171 -IVSWAGDFASAVTRVAIAIIMMPFIVFYLLRD----SDKLKGSILKTFPVKWRKPLSRI 225 Query: 207 VPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + V + G +AI G++ + L + VALG++ ++ +IP G+ ++ Sbjct: 226 LSDVNTQWQGYVQGQVTVAIVVGIMFSILFSLIDLRYAVALGILAGVLNLIPYLGSFLAM 285 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I L+ G L ++ A+E I + + P ++G + + + F L+ Sbjct: 286 LPAIILGLVAGPWMLIKVLIVF-AVEQTIEGRFVSPLVLGTKLSIHPIMILFILLASGSV 344 Query: 323 MGLLGLFIG-PVLMALIAVI 341 G+ G+ +G PV AL V+ Sbjct: 345 FGVWGVLLGIPVYSALKVVV 364 >gi|282876206|ref|ZP_06285073.1| putative membrane protein [Staphylococcus epidermidis SK135] gi|281295231|gb|EFA87758.1| putative membrane protein [Staphylococcus epidermidis SK135] Length = 368 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 8/190 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 LFF +DG D + + P + K ++ K+ + S G I++ GL+L Sbjct: 167 LFFMLKDGHKFK---DYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLF 223 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + L I A+ +++P G I+ + + +I + +W ++ Sbjct: 224 IGYSIIGLKYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQF 283 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F + P ++G +K+ L F L+ MG++G+ IG L A++ V+ M Sbjct: 284 F-EGHFISPNVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLF 342 Query: 350 KENKEKISSN 359 K + N Sbjct: 343 KRRYNRYYGN 352 >gi|225868326|ref|YP_002744274.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701602|emb|CAW98855.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 393 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 25/257 (9%) Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S L S Q +++F K N ID+ FA I ++II LF+F Sbjct: 145 YRSNLQDMLTSMSQKALDYAQSFSK-NAIDWAGNFAGAIARI----TVAIIMSPFILFYF 199 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAY 233 RD + L ++ P ++ ++R++ ++ + G +AI GL+ + Sbjct: 200 LRDSGHMKNGL----VNVLPIKLRQPMARVLGEINQQLSGYVQGQVTVAIVVGLMFSVMF 255 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L G+ + G+I + MIP G+ ++ V I +++G + L ++ IE I Sbjct: 256 SLVGLNYSITFGIIAGFLNMIPYLGSFLAMIPVVIMGMVQGPLMLIKVLIIF-VIEQTIE 314 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF-IGPVLMALIAVI-----WKESI 346 + + P ++G + + + F L+ G+ G+F + PV ++ V+ W + I Sbjct: 315 GRFVAPLVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKDI 374 Query: 347 MAIKENK----EKISSN 359 + E K E+I+ + Sbjct: 375 TGLYEEKPTEAERIAED 391 >gi|108760978|ref|YP_629833.1| hypothetical protein MXAN_1581 [Myxococcus xanthus DK 1622] gi|108464858|gb|ABF90043.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 395 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFI 291 + +A VP+ + + MA+IP V+ L+ G+ + A L +WG + + + Sbjct: 231 FLIARVPAALFFAGVAFFMALIPAVGAAIVVLVAAALMFFSGHPWAALFLAIWGTVVVGL 290 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 VD ++P L + FF L+GG+ G +GL +GP+++A Sbjct: 291 VDNIVKPLLARRGMHQHAAIVFFALLGGLAAFGTVGLLLGPLIVA 335 >gi|303240190|ref|ZP_07326710.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302592281|gb|EFL62009.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 365 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 7/98 (7%) Query: 166 SIIFMI-IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI---VPKVIRSTFLGMTII 221 +II MI LF+F +D S+ +L EHL + + +I + K + S +G + Sbjct: 165 TIILMIPFILFYFLKDDEEFSK---NLIEHLPKKHVANVEKILYDIDKALSSYLVGQMTV 221 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 A+ +G+++ Y + G+ + L + I A+IP P Sbjct: 222 AMADGILMFIGYLIIGIKYPLILSIFVVITAIIPFFGP 259 >gi|251810791|ref|ZP_04825264.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|251805719|gb|EES58376.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|329735852|gb|EGG72131.1| putative membrane protein [Staphylococcus epidermidis VCU028] Length = 405 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 8/190 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 LFF +DG D + + P + K ++ K+ + S G I++ GL+L Sbjct: 204 LFFMLKDGHKFK---DYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLF 260 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + L I A+ +++P G I+ + + +I + +W ++ Sbjct: 261 IGYSIIGLKYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQF 320 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F + P ++G +K+ L F L+ MG++G+ IG L A++ V+ M Sbjct: 321 F-EGHFISPNVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLF 379 Query: 350 KENKEKISSN 359 K + N Sbjct: 380 KRRYNRYYGN 389 >gi|84497791|ref|ZP_00996588.1| integral membrane protein [Janibacter sp. HTCC2649] gi|84381291|gb|EAP97174.1| integral membrane protein [Janibacter sp. HTCC2649] Length = 404 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 27/203 (13%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY------------W 200 A++ G+ + ALFFF DG +++ + LFP W Sbjct: 190 AAQAGLTVTHLVAGFFISMFALFFFLYDG----ERIWAWVVRLFPRTSRDRVHSSGVIAW 245 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 ++S R+T L + A+G G+V G L GVP + V+ A IP GA Sbjct: 246 GQLSAFT----RATILVAAVDALGIGIVAG----LLGVPFASGVAVLVFFGAFIPVIGAA 297 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPFLPTFFGLVG 318 IS AV + L + + L G I + ++ L+PFL+G +++ L G+ G Sbjct: 298 IS-GAVPVLLALVALGPVQALIMLGGVIAVQQLESHVLQPFLLGRAVRVHPLAVILGIAG 356 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 GV G+LG I L+A++ + Sbjct: 357 GVVAAGILGALIAVPLVAVLNAV 379 >gi|171779330|ref|ZP_02920294.1| hypothetical protein STRINF_01175 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281947|gb|EDT47378.1| hypothetical protein STRINF_01175 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 371 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 7/176 (3%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGV 238 +S+Q + L + Y K + ++ ++ F G + E ++LGS L + Sbjct: 196 QLSRQFNLLIDSYLGKYAKTVHYVLD-ILHQRFHGFFVGQTLEAMILGSLTAGGMLLLHL 254 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P +G++ A A+IP GA I T + L+ ++ A ++ + + Sbjct: 255 PYAATIGILVAFTALIPVVGAYIGLT-IGFILIATQSVSQAIFFVIYLVVLQQFEGNLIY 313 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P +VGG I LP + + G G+LG+ + L A + I K+++ +EN+ Sbjct: 314 PRVVGGSIGLPGMWVLMAITIGAALWGVLGMLVAVPLAASLYQIIKDNVAKRQENR 369 >gi|313123300|ref|YP_004033559.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279863|gb|ADQ60582.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 384 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 2/169 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG + L + K+ V + + S +G +AI G++L Y Sbjct: 180 LFFMLKDGHKLRPFLVKFAPQRWEQATSKLLHEVNQAVSSYVIGQVSVAICVGIMLFIGY 239 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G P AL + + + +IP G I I L+ A L ++ IE I Sbjct: 240 TIIGEPYGAALAICSGFLNLIPYFGTFIGLIPALIIALVTDLSMVAKVLVVF-FIEQIIE 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P +VG +K+ T ++G GL G+ G + A++ ++ Sbjct: 299 TRVISPLVVGNRLKMHPATTIVVMLGAGSVWGLWGVIGGIPIYAVMKIL 347 >gi|315303146|ref|ZP_07873817.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] gi|313628477|gb|EFR96939.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] Length = 360 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 212 KVIEAQF----IIALVNAVLTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 267 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 268 IGYSIGGVEYIFYILIVVIVIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 323 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ I++ K+ IS Sbjct: 324 GIWGLIVGIPVVMFFLDVLGVTGQEEIEQPKDTIS 358 >gi|254416119|ref|ZP_05029874.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196177052|gb|EDX72061.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 336 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P + L I + +IP GA + T V++ +L +G + + T L + ++ + + L Sbjct: 223 IPYALVLAAIAGVFDLIPAIGATLGITIVALIVLPQGILLSITVLAICVTLQQ-VEENLL 281 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 P ++ G + + + FF L+ G R GLLG+F+ Sbjct: 282 MPRIMQGSLDMNPVVMFFALLVGARVAGLLGVFLA 316 >gi|27467958|ref|NP_764595.1| hypothetical protein SE1040 [Staphylococcus epidermidis ATCC 12228] gi|27315503|gb|AAO04637.1|AE016747_134 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] Length = 409 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 8/190 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 LFF +DG D + + P + K ++ K+ + S G I++ GL+L Sbjct: 208 LFFMLKDGHKFK---DYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLF 264 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + L I A+ +++P G I+ + + +I + +W ++ Sbjct: 265 IGYSIIGLKYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQF 324 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F + P ++G +K+ L F L+ MG++G+ IG L A++ V+ M Sbjct: 325 F-EGHFISPNVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLF 383 Query: 350 KENKEKISSN 359 K + N Sbjct: 384 KRRYNRYYGN 393 >gi|307128736|ref|YP_003880766.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] gi|306483198|gb|ADM90068.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] Length = 493 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 110 LSDIPGGMWASELWTKH--LSHPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYC 164 L IPGG A T H L+ P L+I +E FLK G++++ F+ F +D Sbjct: 204 LQSIPGGAIARPFITHHNALNIPLYLRISNELFLKKLIVGGLEYVYEFSRNFRNEGIDKI 263 Query: 165 LSIIFMIIALFFFYRDGF 182 + F I+ L+ Y+D F Sbjct: 264 HNTEFTILELYVSYKDYF 281 >gi|163942329|ref|YP_001647213.1| sporulation integral membrane protein YtvI [Bacillus weihenstephanensis KBAB4] gi|163864526|gb|ABY45585.1| Sporulation integral membrane protein YtvI [Bacillus weihenstephanensis KBAB4] Length = 372 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++F+++A FF D ++ ++ L + Y K I + K + + Sbjct: 179 LVFVLLATFFISYDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 238 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +++ + VP + + +IT ++ ++P G F IY+ G+ F G Sbjct: 239 IIVLIGLLILRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD-----TAFAIG 293 Query: 286 AIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+IV + + P ++ I L L T L G + G LGL IGPV++ L+ + Sbjct: 294 LLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTL 353 Query: 342 WKESI 346 K + Sbjct: 354 HKAHV 358 >gi|57866873|ref|YP_188508.1| hypothetical protein SERP0929 [Staphylococcus epidermidis RP62A] gi|242242638|ref|ZP_04797083.1| permease [Staphylococcus epidermidis W23144] gi|293366676|ref|ZP_06613352.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|57637531|gb|AAW54319.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|242233774|gb|EES36086.1| permease [Staphylococcus epidermidis W23144] gi|291318977|gb|EFE59347.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|319401353|gb|EFV89564.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] gi|329725108|gb|EGG61602.1| putative membrane protein [Staphylococcus epidermidis VCU144] gi|329736684|gb|EGG72950.1| putative membrane protein [Staphylococcus epidermidis VCU045] Length = 405 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 8/190 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 LFF +DG D + + P + K ++ K+ + S G I++ GL+L Sbjct: 204 LFFMLKDGHKFK---DYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLF 260 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + L I A+ +++P G I+ + + +I + +W ++ Sbjct: 261 IGYSIIGLKYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQF 320 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F + P ++G +K+ L F L+ MG++G+ IG L A++ V+ M Sbjct: 321 F-EGHFISPNVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLF 379 Query: 350 KENKEKISSN 359 K + N Sbjct: 380 KRRYNRYYGN 389 >gi|291485147|dbj|BAI86222.1| hypothetical protein BSNT_03979 [Bacillus subtilis subsp. natto BEST195] Length = 279 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 16/158 (10%) Query: 194 HLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L P W+K R V + G ++ + G++ G ++W+ G+P + LG+I+ Sbjct: 117 YLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLISG 176 Query: 250 IMAMIP------GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +IP G P A++I +K + +F I F+ L PF+VG Sbjct: 177 VTNVIPYFGPFIGAVPALLIAMTIS--VKAVLVVVITVF----ILQFMEGNILSPFIVGR 230 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +K+ + L+ G G++G+ + A++ V+ Sbjct: 231 SLKMHPVVIMLALLAGGELAGIVGMILAVPATAVLKVM 268 >gi|229105024|ref|ZP_04235678.1| hypothetical protein bcere0019_41600 [Bacillus cereus Rock3-28] gi|228678401|gb|EEL32624.1| hypothetical protein bcere0019_41600 [Bacillus cereus Rock3-28] Length = 361 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTV 348 >gi|229019611|ref|ZP_04176424.1| hypothetical protein bcere0030_41130 [Bacillus cereus AH1273] gi|229025850|ref|ZP_04182248.1| hypothetical protein bcere0029_41410 [Bacillus cereus AH1272] gi|228735461|gb|EEL86058.1| hypothetical protein bcere0029_41410 [Bacillus cereus AH1272] gi|228741691|gb|EEL91878.1| hypothetical protein bcere0030_41130 [Bacillus cereus AH1273] Length = 361 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAIIRTV 348 >gi|218899559|ref|YP_002447970.1| hypothetical protein BCG9842_B0726 [Bacillus cereus G9842] gi|218541668|gb|ACK94062.1| putative membrane protein [Bacillus cereus G9842] Length = 355 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 291 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVKPLL 350 Query: 349 IKEN 352 KE+ Sbjct: 351 KKED 354 >gi|229175064|ref|ZP_04302582.1| hypothetical protein bcere0006_41460 [Bacillus cereus MM3] gi|228608432|gb|EEK65736.1| hypothetical protein bcere0006_41460 [Bacillus cereus MM3] Length = 361 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMLALLVGGEIAGIVGLLISVPILAVIRTV 348 >gi|225868492|ref|YP_002744440.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701768|emb|CAW99160.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 384 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 7/181 (3%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGV 238 + QQ +L + Y K + +V ++ S F G + E ++LGS ++ + Sbjct: 206 ELCQQATTLIDTYTGKYAKTVHYLVS-LLHSRFRGFFVSQTLEAMILGSLTAIGMFILQL 264 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P +GV+ A A+IP GA I A+ L++ ++ A ++ I I + Sbjct: 265 PFAGTIGVLVAFTALIPVVGASIG-AAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIY 323 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P +VGG I LP + + G G++G+ + L A + + K+ I + +++ S Sbjct: 324 PRVVGGSIGLPAMWVLMAITIGAALKGIVGMIVAVPLAATLYQVIKDHIHKKQALQDRQS 383 Query: 358 S 358 + Sbjct: 384 N 384 >gi|332187090|ref|ZP_08388830.1| hypothetical protein SUS17_2225 [Sphingomonas sp. S17] gi|332012790|gb|EGI54855.1| hypothetical protein SUS17_2225 [Sphingomonas sp. S17] Length = 364 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +R+ + MT + + G+ LG +AGVPS ALG++T + +P PI+ ++ L Sbjct: 201 LRAQLIQMTTMGVLVGIGLG----IAGVPSAAALGLLTGLSEFVPYVGPIAAMLPALGLA 256 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +G + A+ I + PF+ + +P T F ++ GL GLF Sbjct: 257 AQGGNGAVIGTLVTFAVVRLIQTNAITPFVTSRVVAIPPAITLFAIIAIGTIFGLFGLFF 316 Query: 331 GPVLMALI 338 ++ ++ Sbjct: 317 SAAILVVV 324 >gi|228967465|ref|ZP_04128494.1| hypothetical protein bthur0004_42630 [Bacillus thuringiensis serovar sotto str. T04001] gi|228792242|gb|EEM39815.1| hypothetical protein bthur0004_42630 [Bacillus thuringiensis serovar sotto str. T04001] Length = 361 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVKPLL 356 Query: 349 IKEN 352 KE+ Sbjct: 357 KKED 360 >gi|72535366|gb|AAT67989.2| permease protein [Halobacterium sp. AS7092] Length = 322 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 10/149 (6%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEG----LVLGSAYWLAGVPSHVALGVITAIMA 252 P ++ + + K R T + ++ + LV + L G + + L ++ A++ Sbjct: 126 PHDYRDVVYALTKRARETLYAIYVLQVATSIATLLVAYPLFRLLGYEAALTLSIMAAVLQ 185 Query: 253 MIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIV---DKTLRPFLVGGPIKLP 308 +P P A +++Y + G++ AT + + G + F+ D +RP L LP Sbjct: 186 FVPIIGPSMLIAPITLYHVAVGDLVAATLIGVLGLV--FVAWLPDIAVRPRLSRRSAGLP 243 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 F G GG+ T+G +G+ +GP+++A+ Sbjct: 244 GSLYFVGFTGGLFTLGPIGIVVGPLIVAV 272 >gi|322411655|gb|EFY02563.1| hypothetical membrane spanning protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 375 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 45/303 (14%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +IA++S + F P +KE+V+++ +H + R + I G ++ Sbjct: 104 LIASISALTKFDTP----------SIKEVVNQL----EHNKLLARVIKYIGGDAKLTQTI 149 Query: 124 TKHLSHPQSLKILSETFLK------TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 T + S+ LK TN + + AS +F+ + S+ + Sbjct: 150 TSY----------SQQLLKQFIGVLTNILTSVTVIASAIINLFISFVFSL--------YV 191 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AY 233 + S+ +Q ++L + Y + I +V ++ F G + E ++LG+ Sbjct: 192 LANKESLCRQGNTLVDTYTGKYAQSIHYLVD-LLHHRFHGFFVSQTLEAMILGTLTTTGM 250 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +L +P +GV+ A A+IP GA I A+ L++ ++ A ++ I I Sbjct: 251 FLLQLPFAGTIGVLVAFTALIPVVGASIG-AAIGFVLIMTQSMSQAIVFIVFLIILQQIE 309 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P +VGG I LP + + G G++G+ I L A + + K++I + Sbjct: 310 GNFIYPRVVGGSIGLPAMWVLMAITIGASLRGIVGMIIAVPLAATLYQVIKDNIQRKQAI 369 Query: 353 KEK 355 ++K Sbjct: 370 QKK 372 >gi|225870497|ref|YP_002746444.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225699901|emb|CAW93811.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 384 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 7/181 (3%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGV 238 + QQ +L + Y K I +V ++ S F G + E ++LGS ++ + Sbjct: 206 ELCQQATTLIDTYTGKYAKAIHYLVG-LLHSRFRGFFVSQTLEAMILGSLTAIGMFILQL 264 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P +GV+ A A+IP GA I A+ L++ ++ A ++ I I + Sbjct: 265 PFAGTIGVLVAFTALIPVVGASIG-AAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIY 323 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P +VGG I LP + + G G++G+ + L A + + K+ I + + + S Sbjct: 324 PRVVGGSIGLPAMWVLMAITIGAALKGIVGMIVAVPLAATLYQVVKDHIHKKQALQNRQS 383 Query: 358 S 358 S Sbjct: 384 S 384 >gi|30022466|ref|NP_834097.1| hypothetical protein BC4385 [Bacillus cereus ATCC 14579] gi|206969567|ref|ZP_03230521.1| putative membrane protein [Bacillus cereus AH1134] gi|218236103|ref|YP_002369200.1| hypothetical protein BCB4264_A4510 [Bacillus cereus B4264] gi|296504881|ref|YP_003666581.1| hypothetical protein BMB171_C4052 [Bacillus thuringiensis BMB171] gi|29898024|gb|AAP11298.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206735255|gb|EDZ52423.1| putative membrane protein [Bacillus cereus AH1134] gi|218164060|gb|ACK64052.1| putative membrane protein [Bacillus cereus B4264] gi|296325933|gb|ADH08861.1| hypothetical protein BMB171_C4052 [Bacillus thuringiensis BMB171] Length = 355 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 291 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVRPLL 350 Query: 349 IKEN 352 KE+ Sbjct: 351 KKED 354 >gi|119486999|ref|ZP_01620871.1| hypothetical protein L8106_18821 [Lyngbya sp. PCC 8106] gi|119455928|gb|EAW37062.1| hypothetical protein L8106_18821 [Lyngbya sp. PCC 8106] Length = 376 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 26/204 (12%) Query: 170 MIIALF---FFYRDGFSISQQLDSLGEHLFPAYWK--------KISRIVPKVIRSTFLGM 218 +IIALF + D ++ + L LFP W ++SR + IR L Sbjct: 169 LIIALFVSGYMVADSNTLIKSL----VQLFPYPWNERLNAQVSQVSRRMGGYIRGRLLVS 224 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFN 277 I+ + + LG +L + LG I + +IP PI I L KG Sbjct: 225 GILGVATTMGLG---FLGLREFALGLGAIAGVTNLIPFLGPILGAIPALIVALAKGGFLF 281 Query: 278 ATCLFLW---GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 L L+ +E +++D P LVG + + L ++GGV+ +G+LG I P Sbjct: 282 FWVLLLYVIAQNVETYVLD----PLLVGTSVGVHPLFQLLSVLGGVQVLGILGALIVPPW 337 Query: 335 MALIAVIWKESIMAIKENKEKISS 358 A +A + + + KE +E++ Sbjct: 338 FAGVAALVENLYLKPKEEQEQLKK 361 >gi|228910226|ref|ZP_04074044.1| hypothetical protein bthur0013_43740 [Bacillus thuringiensis IBL 200] gi|228923142|ref|ZP_04086433.1| hypothetical protein bthur0011_41220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954675|ref|ZP_04116698.1| hypothetical protein bthur0006_40440 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960662|ref|ZP_04122307.1| hypothetical protein bthur0005_41240 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048098|ref|ZP_04193671.1| hypothetical protein bcere0027_40710 [Bacillus cereus AH676] gi|229071899|ref|ZP_04205110.1| hypothetical protein bcere0025_40660 [Bacillus cereus F65185] gi|229081655|ref|ZP_04214150.1| hypothetical protein bcere0023_42850 [Bacillus cereus Rock4-2] gi|229111863|ref|ZP_04241409.1| hypothetical protein bcere0018_41070 [Bacillus cereus Rock1-15] gi|229129671|ref|ZP_04258639.1| hypothetical protein bcere0015_41130 [Bacillus cereus BDRD-Cer4] gi|229146961|ref|ZP_04275325.1| hypothetical protein bcere0012_41000 [Bacillus cereus BDRD-ST24] gi|229152594|ref|ZP_04280783.1| hypothetical protein bcere0011_41290 [Bacillus cereus m1550] gi|229180666|ref|ZP_04308006.1| hypothetical protein bcere0005_40100 [Bacillus cereus 172560W] gi|228602811|gb|EEK60292.1| hypothetical protein bcere0005_40100 [Bacillus cereus 172560W] gi|228630855|gb|EEK87495.1| hypothetical protein bcere0011_41290 [Bacillus cereus m1550] gi|228636560|gb|EEK93026.1| hypothetical protein bcere0012_41000 [Bacillus cereus BDRD-ST24] gi|228653788|gb|EEL09658.1| hypothetical protein bcere0015_41130 [Bacillus cereus BDRD-Cer4] gi|228671619|gb|EEL26917.1| hypothetical protein bcere0018_41070 [Bacillus cereus Rock1-15] gi|228701659|gb|EEL54150.1| hypothetical protein bcere0023_42850 [Bacillus cereus Rock4-2] gi|228711195|gb|EEL63159.1| hypothetical protein bcere0025_40660 [Bacillus cereus F65185] gi|228723253|gb|EEL74625.1| hypothetical protein bcere0027_40710 [Bacillus cereus AH676] gi|228799026|gb|EEM45998.1| hypothetical protein bthur0005_41240 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805002|gb|EEM51598.1| hypothetical protein bthur0006_40440 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836521|gb|EEM81871.1| hypothetical protein bthur0011_41220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849390|gb|EEM94226.1| hypothetical protein bthur0013_43740 [Bacillus thuringiensis IBL 200] Length = 361 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVRPLL 356 Query: 349 IKEN 352 KE+ Sbjct: 357 KKED 360 >gi|41614957|ref|NP_963455.1| hypothetical protein NEQ162 [Nanoarchaeum equitans Kin4-M] gi|40068681|gb|AAR39016.1| NEQ162 [Nanoarchaeum equitans Kin4-M] Length = 327 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 81/178 (45%), Gaps = 4/178 (2%) Query: 162 DYCLSIIFMIIALFFFYRDGF-SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 D L I +++ ++F DG +I ++ + E +I + + +G Sbjct: 124 DMFLGIFIAMLSAYYFLLDGQKAIDYIINWIAES--KEDRNQIINTTKSYLDAVIIGTIF 181 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 A+ + +V + + + + L ++ I+A++P G + + +++Y ++ NI Sbjct: 182 GALAQAVVSYIGFLILNIKLALVLSILVFIVAILPIVGPSMIWVLLALYYFMQNNISFTI 241 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 ++G + ++D +R F V + L ++GG MG GLF+GPVL+ L Sbjct: 242 FSLVYGLFVVGLIDNIVRMFTVSSKADIHPLLAALSMIGGSILMGFAGLFLGPVLVGL 299 >gi|153816489|ref|ZP_01969157.1| hypothetical protein RUMTOR_02742 [Ruminococcus torques ATCC 27756] gi|317500769|ref|ZP_07958986.1| hypothetical protein HMPREF1026_00929 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089753|ref|ZP_08338647.1| hypothetical protein HMPREF1025_02230 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846185|gb|EDK23103.1| hypothetical protein RUMTOR_02742 [Ruminococcus torques ATCC 27756] gi|316897862|gb|EFV19916.1| hypothetical protein HMPREF1026_00929 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403636|gb|EGG83191.1| hypothetical protein HMPREF1025_02230 [Lachnospiraceae bacterium 3_1_46FAA] Length = 380 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 4/173 (2%) Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA----GVPSHV 242 Q+ + W+K V + TF E L+LGS +++A +P + Sbjct: 208 QVKKVMHAFLKEKWEKRCLKVCTLTSKTFSNFLTGQCLEALILGSMFFVAMSLFKMPYAL 267 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +GV+ A A+IP V +L++ + A + + I + P +VG Sbjct: 268 LVGVLVAFTALIPIFGAFIGCVVGAFLILMVDPLQALFFVIMFLVLQQIEGNLIYPKVVG 327 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + LP + + G MG++G+ I L++++ +++ES+ E K++ Sbjct: 328 NSVGLPSIWVLAAVTIGGSLMGVVGMLIFIPLVSVVYTLFRESVYKRLEQKQR 380 >gi|288555382|ref|YP_003427317.1| putative autoinducer export protein AI-2E [Bacillus pseudofirmus OF4] gi|288546542|gb|ADC50425.1| putative autoinducer export protein AI-2E [Bacillus pseudofirmus OF4] Length = 354 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 16/175 (9%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +F+F +D F + ++ + +L P W K+ ++ V S G ++A+ ++ Sbjct: 176 VFYFLKD-FDL---IEKVSWYLTPRKWRPGLKRYAKDVDHSFGSYIRGQLLVALAVTIIS 231 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKG---NIFNATCLFLWG 285 +WL GVP + LGV MIP GA I I L + + A + + Sbjct: 232 SLGFWLIGVPYPILLGVFMGATEMIPYFGAYIGAVPAIIIALFESWQLALITAGFILILQ 291 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 IE L P +VG + L + LV G+ G++GL + +A++ V Sbjct: 292 QIE----GNILSPVIVGKTLHLHPILIILALVIGIEAGGVIGLLLAVPALAILKV 342 >gi|229135431|ref|ZP_04264218.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST196] gi|228647992|gb|EEL04040.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST196] Length = 365 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++F+++A FF D ++ ++ L + Y K I + K + + Sbjct: 172 LVFVLLATFFISYDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +++ + VP + + +IT ++ ++P G F IY+ G+ F G Sbjct: 232 IIVLIGLLILRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD-----TAFAIG 286 Query: 286 AIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+IV + + P ++ I L L T L G + G LGL IGPV++ L+ + Sbjct: 287 LLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTL 346 Query: 342 WKESI 346 K + Sbjct: 347 HKAHV 351 >gi|24379535|ref|NP_721490.1| putative permease [Streptococcus mutans UA159] gi|290580464|ref|YP_003484856.1| putative permease [Streptococcus mutans NN2025] gi|24377477|gb|AAN58796.1|AE014947_8 putative permease [Streptococcus mutans UA159] gi|254997363|dbj|BAH87964.1| putative permease [Streptococcus mutans NN2025] Length = 374 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 34/280 (12%) Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNG 145 +++ ++++V QH V + L+ G S L + + S +ILS+ FL TN Sbjct: 117 DIQNIINEV----QHNKWVSKMLASFGGDTQISSLISNY-----SRQILSQ-FLSVLTNV 166 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + AS IF+ SIIF + L + + +Q + L + Y + Sbjct: 167 LTSVTSIASALISIFV----SIIFSMYVL----ANKEKLGRQFNLLIDTYLGKYSGTVHY 218 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 +V ++ S F G + E ++LG+ L +P +G++ A A+IP GA I Sbjct: 219 LV-GILHSRFHGFFVGQTLEAMILGTLTAIGMMLFNLPYAATIGILIAFTALIPVVGAYI 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGG 319 T +I +L + F+ +FL I L + + P +VG I LP + + G Sbjct: 278 GVTIGTILILTQS--FSQAVVFLVFVILLQQFEGNVIYPRVVGSSIGLPSMWVLLAITIG 335 Query: 320 VRTMGLLGLFIG-PVLMALIAVIWKESI---MAIKENKEK 355 GL+G+ + P+L +L +I K+ + K ++EK Sbjct: 336 GALAGLVGMLMAVPILASLYQII-KDHVYQKQTQKASQEK 374 >gi|238792094|ref|ZP_04635730.1| permease perM [Yersinia intermedia ATCC 29909] gi|238728725|gb|EEQ20243.1| permease perM [Yersinia intermedia ATCC 29909] Length = 362 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 59/271 (21%), Positives = 121/271 (44%), Gaps = 44/271 (16%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWP---IYSSFISKKEE 57 R +PQ I +I+ + LYF G AP+L+A+++ + WP + S+ Sbjct: 18 RRRFTDPQVIALLVILLVGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQRIGCSRPWA 77 Query: 58 SSTFLAVIATVSVMCLFIV-PLLFLFYYGML-EMKELVSKVVLANQHGIPVP-RWLSDIP 114 +S L + ++++ +F+V P ++ ++ +M ++++K N +P R+ + + Sbjct: 78 ASIVLVIFGGITLLAVFVVAPTVWQQGNNLISDMPKMLNKF---NAFAQTLPSRYPALVD 134 Query: 115 GG---MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 G M A L +K L + E+ +K + AS G++ L + +I + Sbjct: 135 AGIVDMMAENLRSK-------LSGMGESVVKIS-------LASLIGLLTL--AIYLILVP 178 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFP-------AYWKKISRIVPKVIRSTFLGMTIIAIG 224 + LFF +D +Q+ + + P W ++++ + IR L M I+ I Sbjct: 179 LMLFFLLKD----KEQMLNAVRRILPRNRGLAGQVWLEMNQQITNYIRGKVLEMVIVGIA 234 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 LV +++ G+ + L V+ +IP Sbjct: 235 TYLV----FFVMGMNYALLLAVLVGFSVLIP 261 >gi|219669593|ref|YP_002460028.1| hypothetical protein Dhaf_3575 [Desulfitobacterium hafniense DCB-2] gi|219539853|gb|ACL21592.1| protein of unknown function UPF0118 [Desulfitobacterium hafniense DCB-2] Length = 344 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 8/149 (5%) Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 W+++ + + ++RS G I+A+ G++ G L G+ + +GVI + +IP P Sbjct: 189 WQRVVQDISHIVRSFIRGNVIVALIVGILTGVGVKLVGMDYALLIGVICGVFDLIPYFGP 248 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----TLRPFLVGGPIKLPFLPTFFG 315 + S+ L + + + L AI + IV + + P L+G + L L F Sbjct: 249 LIGAVPSVLL----GLIQSPMMALKVAIVILIVQQLESSIISPKLMGDSVGLHPLWIIFA 304 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G G G+ A++ VI + Sbjct: 305 LLAGGEIAGFWGMLFAVPFAAVLRVIIRH 333 >gi|269926458|ref|YP_003323081.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] gi|269790118|gb|ACZ42259.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] Length = 438 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 79/366 (21%), Positives = 146/366 (39%), Gaps = 45/366 (12%) Query: 1 MRETMLNPQG--IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 MRE + I W+ + +IL L+ P + A++ + P+ S F+S++ Sbjct: 1 MREIRFTKRAKEITIWISIAVILYFLHSTAHLLTPFIWAIVATYIFHPLVS-FLSRESGV 59 Query: 59 ST-------FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 ++A + V+ + +VP++ + LANQ VP L+ Sbjct: 60 PRAIWIILLYIAAFSAVAWSLINVVPII------------RDQSLALANQ----VPYILN 103 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 I G + +++ + LK L L N D+ R A + +D + Sbjct: 104 QIEGIINRNQML-REWGISVDLKQLESQVVALSDNFADYARRMAVPILTVVIDKAVKFFI 162 Query: 170 MIIALFFFYRDGFSISQQLDSLG----EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++A FF I L H ++I+ + +RS + + I+ I Sbjct: 163 FLVATFFLLLHADHIKSSLLEFTPAPYRHEIENLLRRINDTLGAYLRSQLILLAIMTIAT 222 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFL 283 + L + + V + LGV+T + +IP P + AVS+ L F + L Sbjct: 223 WIFLSAIH----VQYALLLGVLTGFLELIPIIGPYTAGGIAVSVALFQSNPPFGWSNFTL 278 Query: 284 WGAIEL--FIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + L FI+ D + PFL+G + L + F ++ G G+LGL I + ++ Sbjct: 279 AAVVALGYFILRQLEDNLVIPFLIGRVVHLNPIIVIFFIMAGASYGGILGLLIAVPIASV 338 Query: 338 IAVIWK 343 + +I + Sbjct: 339 LRIIAQ 344 >gi|294635431|ref|ZP_06713920.1| permease, PerM family [Edwardsiella tarda ATCC 23685] gi|291091200|gb|EFE23761.1| permease, PerM family [Edwardsiella tarda ATCC 23685] Length = 356 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 57/273 (20%), Positives = 115/273 (42%), Gaps = 48/273 (17%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWPIYSSFISKKEE--- 57 R +PQ I I+ + +YF G AP+L A+++ + WP + K E Sbjct: 7 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWP------TNKLEGIG 60 Query: 58 -------SSTFLAVIATVSVMCLFIVPLLFLFYYGML-EMKELVSKVVLANQHGIPVPRW 109 L I V V L ++P+++ G++ +M ++V++ ++ +PR Sbjct: 61 CSRIWAVCVVLLVFIGIVLVTMLVLIPIVWQQGLGLMGDMPKMVTRF---YEYAATLPR- 116 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 P M A + + + ++ E+ LK + AS GM+ L L ++ Sbjct: 117 --RYPALMDAGIIDVVVENLRARMALMGESVLKFS-------LASLVGMVTLAIYLVLVP 167 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFP-------AYWKKISRIVPKVIRSTFLGMTIIA 222 +++ FF +D Q L++L + P W ++++ + IR + M ++ Sbjct: 168 LMV--FFLLKDK---EQMLNAL-RRVLPRERGLAGQVWLEMNQQITNYIRGKVVEMIVVG 221 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + LV + + G+ + L V+ + +IP Sbjct: 222 VATYLV----FLILGLNYGLLLAVLVGVSVLIP 250 >gi|75761648|ref|ZP_00741597.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902918|ref|ZP_04067059.1| hypothetical protein bthur0014_40860 [Bacillus thuringiensis IBL 4222] gi|74490869|gb|EAO54136.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856702|gb|EEN01221.1| hypothetical protein bthur0014_40860 [Bacillus thuringiensis IBL 4222] Length = 361 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 27/184 (14%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMA 348 F+ L P++VG +++ + L+ G G++GL I P+L + VI + Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTVIVHVKPLL 356 Query: 349 IKEN 352 KE+ Sbjct: 357 KKED 360 >gi|118086653|ref|XP_419042.2| PREDICTED: similar to chromosome 9 open reading frame 5 [Gallus gallus] Length = 901 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 37/204 (18%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW----------KKISRI 206 G L++ LS++ + LF+ L S E+ P W S I Sbjct: 671 GTALLNFVLSVVIFLTTLFYL----------LSSSDEYYKPVKWVISLTPLSQPGPSSNI 720 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV----ITAIMAMIPGGAP--- 259 V + + G+ ++ G WL +H G+ I + +A I G P Sbjct: 721 VGQSVEEAIRGVFDASLKMAGFYGLYTWL----THTIFGINIVFIPSALAAILGAVPFLG 776 Query: 260 ---ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + AV L++G A L ++ + + VD + + GG P+L T + Sbjct: 777 TYWAAIPAVLDLWLVQGEGCKAILLLVFHLLPTYFVDTAIYSDISGG--GHPYL-TGLAV 833 Query: 317 VGGVRTMGLLGLFIGPVLMALIAV 340 GG +GL G IGP+L+ ++ V Sbjct: 834 AGGAYYLGLEGAIIGPILLCILVV 857 >gi|302527288|ref|ZP_07279630.1| predicted protein [Streptomyces sp. AA4] gi|302436183|gb|EFL07999.1| predicted protein [Streptomyces sp. AA4] Length = 405 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%) Query: 200 WKKISRIVPKVIRS--------------TFLGMTI-IAIGEGLVLGSAYWLAGVPSHVAL 244 W + +IVP R +++ T+ +A + + +G WL GVP V L Sbjct: 197 WHFLLKIVPSATRDEIDVAGRRGFASLVSYVRATVAVACVDAVCIGLGIWLVGVPLAVPL 256 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGG 303 + I A IP + AV++ + + N F A + L + + ++ L+PFL+G Sbjct: 257 AALIFIGAFIPILGAVVTGAVAVLIALVANGFVAAGIVLAIVVAVMQLESHVLQPFLLGR 316 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVL 334 ++L L G+ G+ G++G + P+L Sbjct: 317 AVRLHPLAVVLGIALGLEIAGIVGALLAVPIL 348 >gi|229013801|ref|ZP_04170929.1| Sporulation integral membrane protein YtvI [Bacillus mycoides DSM 2048] gi|229169323|ref|ZP_04297033.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH621] gi|228614086|gb|EEK71201.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH621] gi|228747470|gb|EEL97345.1| Sporulation integral membrane protein YtvI [Bacillus mycoides DSM 2048] Length = 365 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 10/185 (5%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++F+++A FF D ++ ++ L + Y K I + K + + Sbjct: 172 LVFVLLATFFISYDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTT 231 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +++ + VP + + +IT ++ ++P G F IY+ G+ F G Sbjct: 232 IIVLIGLLILRVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD-----TAFAIG 286 Query: 286 AIELFIV----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+IV + + P ++ I L L T L G + G LGL IGPV++ L+ + Sbjct: 287 LLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTL 346 Query: 342 WKESI 346 K + Sbjct: 347 HKAHV 351 >gi|229098862|ref|ZP_04229798.1| hypothetical protein bcere0020_40860 [Bacillus cereus Rock3-29] gi|229117887|ref|ZP_04247249.1| hypothetical protein bcere0017_41570 [Bacillus cereus Rock1-3] gi|228665544|gb|EEL21024.1| hypothetical protein bcere0017_41570 [Bacillus cereus Rock1-3] gi|228684535|gb|EEL38477.1| hypothetical protein bcere0020_40860 [Bacillus cereus Rock3-29] Length = 361 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + L+ G G++GL I ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMLALLVGGEIAGIVGLLISVPILAVIRTV 348 >gi|187920328|ref|YP_001889359.1| hypothetical protein Bphyt_5642 [Burkholderia phytofirmans PsJN] gi|187718766|gb|ACD19989.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 361 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 48/251 (19%), Positives = 105/251 (41%), Gaps = 14/251 (5%) Query: 111 SDIPGGMWASELWTKHLSHPQSLKILS--ETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 SD+P + + H P +I+ ++T +P A G+ + ++I Sbjct: 105 SDVP-----NRIPLPHFLEPLRERIVDFVRGQIETGSDKAVP-MARSVGLGVMHAASNLI 158 Query: 169 FMI---IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 +++ I F ++G + + L W +I + ++ + +++ Sbjct: 159 YLVLIPILSFLLIKEGPQMREDFLDLLNDRHRTLWAEIVTDLNVLLSKYVRALLFLSLAT 218 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A+ L GVP L V ++ +P P+ A+++ + + + L ++ Sbjct: 219 LICYGMAFSLLGVPYAFLLAVSAGLLEFVPFAGPLGAVAITLVVAVFSGYPHLLWLVIFI 278 Query: 286 AIELFIVDKTLRPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWK 343 A+ D L P+L+ +++ PFL GL+ G + G+ G+F+ PV+ L +I + Sbjct: 279 ALYRLFQDYVLNPYLMSEGVEVSPFL-VIVGLLAGDQLGGVAGIFLAVPVIAMLKIIIGR 337 Query: 344 ESIMAIKENKE 354 + + E Sbjct: 338 ARVFYAASHDE 348 >gi|290968827|ref|ZP_06560364.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] gi|290781123|gb|EFD93714.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] Length = 359 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 34/246 (13%) Query: 126 HLSHPQSLK-ILSETFLKTN--GIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYR 179 H+ P+ +K +++E +K G+D I +I +++C+ + F+ F+F + Sbjct: 121 HVYIPEQVKQLINEALVKAGNYGVDSITNVVKSVVVIAGTVVEFCV-VPFIT---FYFMK 176 Query: 180 DGFSISQQLDSLGEHLFPAYWK--------KISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 DG + Q S+ FP ++ +I R++ + IR + IIA G++ Sbjct: 177 DGAHLVQSFISI----FPPTYRPRLEGIAGEIHRVLSRYIRGQIILSCIIA---GVIF-C 228 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIEL 289 W+ GVP + +G++ AI IP PI +I L + G++ A + ++ I Sbjct: 229 GMWIMGVPYPMVIGLLAAITEWIPIVGPIVGAVPAILLGATVSGSL--ALKVLIFYVIVQ 286 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF----IGPVLMALIAVIWKES 345 + + P ++G I+L + L+ G MG+ G+ I VL L + +W Sbjct: 287 QMDSHVIMPQVMGAVIRLHPVVIIISLLIGGTLMGVAGMILTVPITAVLQILCSHLWFYE 346 Query: 346 IMAIKE 351 + KE Sbjct: 347 LYKDKE 352 >gi|209520430|ref|ZP_03269191.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209499122|gb|EDZ99216.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 364 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 18/244 (7%) Query: 126 HLSHPQSLKILS--ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRD 180 H P +I+ + ++T +P A G+ + ++I+++ I F +D Sbjct: 115 HFLEPLRERIVDFVRSQIETGSDKAVP-LARSVGLGVVHAASNVIYLVLIPILSFLLIKD 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +L W +I V ++ + +++ L G A+ L GVP Sbjct: 174 GEQMRDAFLALLNRPHRTLWSEIVVDVNVLLSKYVRALLFLSLATLLCYGVAFSLLGVPY 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW-----GAIELFIVDKT 295 L V A++ +P P++ A++I L++ +F+ LW G LF D Sbjct: 234 AFLLAVSAALLEFVPFAGPLA--AIAITLVVA--VFSGYPHLLWLLIFIGLYRLF-QDYV 288 Query: 296 LRPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L P+L+ +++ PFL GL+ G + G+ G+F+ ++A + ++ + M E E Sbjct: 289 LNPYLMSEGVEVSPFL-VIVGLLAGDQLGGVAGIFLAVPVIATLKIVVGRARMFYAELHE 347 Query: 355 KISS 358 ++ Sbjct: 348 HDAA 351 >gi|160940895|ref|ZP_02088235.1| hypothetical protein CLOBOL_05787 [Clostridium bolteae ATCC BAA-613] gi|158436139|gb|EDP13906.1| hypothetical protein CLOBOL_05787 [Clostridium bolteae ATCC BAA-613] Length = 251 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 IA G GL+ AY +AGVP+HVALG AM G +S ++ + +KG + A C Sbjct: 20 IAGGGGLIALPAYLIAGVPAHVALGTNKLSSAM---GTTVSTARLAKHGFLKGKVLMAVC 76 >gi|89895168|ref|YP_518655.1| hypothetical protein DSY2422 [Desulfitobacterium hafniense Y51] gi|89334616|dbj|BAE84211.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 344 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 8/149 (5%) Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 W+++ + + ++RS G I+A+ G++ G L G+ + +GVI + +IP P Sbjct: 189 WQRVVQDISHIVRSFIRGNVIVALIVGILTGVGVKLVGMDYALLIGVICGVFDLIPYFGP 248 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----TLRPFLVGGPIKLPFLPTFFG 315 + S+ L + + + L AI + IV + + P L+G + L L F Sbjct: 249 LIGAVPSVLL----GLIQSPMMALKVAIVILIVQQLESSIISPKLMGDSVGLHPLWIIFA 304 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G G G+ A++ VI + Sbjct: 305 LLAGGEIAGFWGMLFSVPFAAVLRVIIRH 333 >gi|229192602|ref|ZP_04319563.1| hypothetical protein bcere0002_42530 [Bacillus cereus ATCC 10876] gi|228590909|gb|EEK48767.1| hypothetical protein bcere0002_42530 [Bacillus cereus ATCC 10876] Length = 361 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRGTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F+ L P++VG +++ + L+ G G++GL I ++A+I + Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPILAVIRTV 348 >gi|14590842|ref|NP_142914.1| hypothetical protein PH1000 [Pyrococcus horikoshii OT3] gi|8928493|sp|O58728|YA00_PYRHO RecName: Full=UPF0118 membrane protein PH1000 gi|3257414|dbj|BAA30097.1| 355aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 355 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFI 291 ++ +P+ + G++T + + IP G I + A + YL+ +G+I L ++G + + Sbjct: 233 VSNLPTAILAGLLTVLFSFIPLFEGWMI-WLAGAFYLVKQGHIIAGIGLAVYGFTLVSPL 291 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D T+RP LV + + G++GG +GL GL IGP+++ + + +E Sbjct: 292 PDFTIRPKLVAREAEFNDVLVLIGMIGGTWGLGLKGLIIGPIVLNVAIEMLRE 344 >gi|313618959|gb|EFR90805.1| membrane protein YdbI [Listeria innocua FSL S4-378] Length = 345 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 14/155 (9%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAVLTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLIPLTI 252 Query: 268 YLLIKGNI----FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 G + + + + A+E ++ L P L+ LP TF L+ G Sbjct: 253 IGYSIGGVEYIFYILVVVIIIHALESYV----LNPKLMSAKTNLPVFYTFIILIFGEHFF 308 Query: 324 GLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 G+ GL +G PV+M + V+ + + + K+ IS Sbjct: 309 GIWGLIVGIPVVMFFLDVLGVTNQEEVNQPKDIIS 343 >gi|262373133|ref|ZP_06066412.1| PerM family permease [Acinetobacter junii SH205] gi|262313158|gb|EEY94243.1| PerM family permease [Acinetobacter junii SH205] Length = 397 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 28/266 (10%) Query: 111 SDIPGGM-WASEL---WTKHLSHPQSLKILSE-------TFLKTN-GIDFIPRFASRF-- 156 IP G+ W + W H + ++I +E +++TN D I A R Sbjct: 91 DSIPAGIHWINATFLPWVSHTFNVVPMEIDTEQLSKAVMDYIQTNYSADSIQTMALRVAQ 150 Query: 157 -GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 G+ F+ +I + I F+F D + L L + A I R V+ + Sbjct: 151 SGLNFIQLGGIVILIPIIAFYFLLDWERMLDSLRRLIPRPYEASTLTIVRECHSVLGAFV 210 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN 274 G ++ + G+V L G+ + +G++ + ++IP G + A I L + Sbjct: 211 KGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFGVGIIAAVIATLFQFG 270 Query: 275 IFNATCLFLWGAIELFIVDKT-----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 I + L L G + F++ + L+PFL+G I L + F ++ G + G LG+ Sbjct: 271 I-DWMQLLLVGVV--FMIGQMVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQLGGFLGML 327 Query: 330 IGPVLMALIAVIWKESIMAIKENKEK 355 I + A+I V+ K + + N E+ Sbjct: 328 IALPVAAVIVVLLKHA----RNNYER 349 >gi|295397118|ref|ZP_06807227.1| possible permease [Aerococcus viridans ATCC 11563] gi|294974643|gb|EFG50361.1| possible permease [Aerococcus viridans ATCC 11563] Length = 353 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 27/218 (12%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 RF S G FLD II I F++ +D I + + A K++ V KV Sbjct: 152 RFVSYTGT-FLD----IIITPIITFYYLKDKDRIMKAITGEIPVKRLAKAKELGGEVDKV 206 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G +A G++ G W+ GVP + +G++ I +IP P + + L Sbjct: 207 LGGFIKGQLTVAGFVGILTGMGCWIIGVPYSLTIGLVAGITNIIPYFGPWIGGVLPVIL- 265 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFL--------VG-GPIKLPFLPTFFGLVGGVR 321 + + LW + + ++ + FL VG P+ + F FFG Sbjct: 266 ---AFMESPIMALWVTMLIVVIQQVESAFLSPQIMSHSVGLHPLLVIFSVLFFG-----N 317 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G+LG+ IG LM L+ + ++ +KE + +I S Sbjct: 318 MLGILGMIIGVPLMGLLKI----ALRYLKEFRSEIDSK 351 >gi|197335961|ref|YP_002155739.1| hipothetical membrane protein [Vibrio fischeri MJ11] gi|197317451|gb|ACH66898.1| hipothetical membrane protein [Vibrio fischeri MJ11] Length = 353 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%) Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GEH + ++ + +RS G+ +A+ + ++ G GVP+ ++ ++ Sbjct: 198 GEH-----GEALTTLSKTTVRSVVQGVIGVAVIQSVMAGLGMAFVGVPAIGLWMLLVMLI 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+I ++ V +Y+ A +W I + D L+P L+ + P L Sbjct: 253 AIIQLPPILALLPVILYVFSVDTTTTAVLFLIW-CIVVSGSDAILKPMLLSRGSETPMLV 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMAL 337 G +GG+ G++GLF+G V+++L Sbjct: 312 ILLGALGGMAMSGIVGLFVGAVILSL 337 >gi|320114881|ref|YP_004185040.1| sporulation integral membrane protein YtvI [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319927972|gb|ADV78657.1| sporulation integral membrane protein YtvI [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 354 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 47/235 (20%), Positives = 101/235 (42%), Gaps = 20/235 (8%) Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFY 178 ++S P ++ L E+ +++ ++++ FA L++ + + ++A FF Sbjct: 123 YISLPPNITSLIESNMQS-ILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFIS 181 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----MTIIAIGEGLVLGSAYW 234 +D Q + + P++W + ++ + + TF G + I + L + Sbjct: 182 KD----KQLILDFIKRQIPSHWAQHAKSIQVNLLKTFFGYLRAVATIMLITFLEVSIGLA 237 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G LG++ I+ +P G + +++K + L L+G + +V Sbjct: 238 MIGFDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLV--VVV 295 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VG I L L T + G + G LGL IGPV + + + + I+ Sbjct: 296 RQIIEPKIVGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|293379019|ref|ZP_06625173.1| putative membrane protein [Enterococcus faecium PC4.1] gi|292642361|gb|EFF60517.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 334 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 136 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 191 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 192 FLAMRIFNQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 245 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 246 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 303 >gi|104773700|ref|YP_618680.1| hypothetical protein Ldb0590 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513697|ref|YP_812603.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422781|emb|CAI97420.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093012|gb|ABJ58165.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125348|gb|ADY84678.1| Putative permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 378 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 2/169 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG + L + K+ V + + S +G +AI G++ Y Sbjct: 192 LFFMLKDGHKLRPFLVKFAPQRWEQATSKLLHEVNQAVSSYVIGQVSVAICVGIMFFIGY 251 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G P AL + + +IP GA I I L+ A L ++ IE I Sbjct: 252 TIIGEPYGAALAICAGFLNLIPYFGAFIGLIPALIIALVTDLPMVAKVLVVF-FIEQIIE 310 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P +VG +K+ T ++G GL G+ G + A++ ++ Sbjct: 311 TRVISPLVVGNRLKMHPATTIIVMLGAGSVWGLWGVIGGIPIYAVMKIL 359 >gi|253997933|ref|YP_003049996.1| hypothetical protein Msip34_0220 [Methylovorus sp. SIP3-4] gi|313199998|ref|YP_004038656.1| hypothetical protein MPQ_0231 [Methylovorus sp. MP688] gi|253984612|gb|ACT49469.1| protein of unknown function UPF0118 [Methylovorus sp. SIP3-4] gi|312439314|gb|ADQ83420.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 359 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 7/200 (3%) Query: 147 DFIPRFA---SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 DF+ +F S G+ + +++ + I LF+ RD I + D L + A +I Sbjct: 144 DFVGKFLLALSDHGLALFAWLANLVLIPIVLFYLLRDWHDILNRFDQLLPRRWYAKTVEI 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG---GAPI 260 +R V ++ G + + + WL+G+ + +G+I ++ +P G + Sbjct: 204 AREVDMMLAEFLRGQLSVMLLMSAFYATGLWLSGLELALPIGLIAGLLGFVPYLGIGTGM 263 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A++ L + ++G I + L P+LVG I L + F L+ G Sbjct: 264 LLAALASVLQFTTFAQYVPVIAVFG-IGQMLESMWLTPWLVGDRIGLHPVMVIFALLAGG 322 Query: 321 RTMGLLGLFIGPVLMALIAV 340 + G G+ + + A IAV Sbjct: 323 QLFGFTGILLALPVSAAIAV 342 >gi|229062280|ref|ZP_04199601.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH603] gi|228717008|gb|EEL68689.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH603] Length = 365 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 10/114 (8%) Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---- 292 VP + + +IT ++ ++P G F IY+ G+ F G + L+IV Sbjct: 243 VPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGD-----TAFAIGLLILYIVVIVQ 297 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + P ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 298 RQIMEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|254481300|ref|ZP_05094545.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] gi|214038463|gb|EEB79125.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] Length = 360 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 79/379 (20%), Positives = 155/379 (40%), Gaps = 63/379 (16%) Query: 7 NPQGIMRWMIMF----IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 P + RW + +I V+LY L+ +P + +I + P+ S+ + + Sbjct: 8 EPSEVYRWPVAIALAAVICVALYLLQPILSPFVLGGLIAYLGDPLVDRLESRGVGRTLGV 67 Query: 63 AVI-----ATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----VLANQHGIPVPRWLSD- 112 A++ A +++ +F +P+L + ++ L+SKV Q +P WL Sbjct: 68 AIVFLLFSAIITLAIIFALPML------LHQLDALISKVPEIYRWLTQDALP---WLQQR 118 Query: 113 --IPGGMWASELWTKHLSHP-QSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 IP W+ L+ QS+ K +++ + G G L ++ Sbjct: 119 LAIPERRLPQVDWSGQLADNWQSVGKFTAQSLKRITG----------SGANLLLSLANLA 168 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK--------ISRIVPKVIRSTFLGMTI 220 + + F+ RD + + +LG + P W++ +V +R FL M Sbjct: 169 LVPVVAFYLMRDWNLLLDK--ALG--IVPLSWQQRTSELAGEADEVVGAFLRGQFLVMCA 224 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI-FNAT 279 + G + + WL G+ + LG+I + +++P + F + LI FN Sbjct: 225 L----GAIYSAGLWLVGLQLAMLLGLIAGLSSIVP---YLGFMVGIVASLIAAYAQFNDW 277 Query: 280 CLFLWGAIELFIVDKT-----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + LW + +F V + L P LVG I L + F L+ G + G +G+ + + Sbjct: 278 TMLLW-VVLVFGVGQAVESMLLTPILVGDRIGLHPVAVIFVLMAGAQVAGFVGVVLALPV 336 Query: 335 MALIAVIWKESIMAIKENK 353 A+I V + ++ + ++ Sbjct: 337 GAVIMVFLRHALQHYRSSE 355 >gi|154148283|ref|YP_001406674.1| transport protein [Campylobacter hominis ATCC BAA-381] gi|153804292|gb|ABS51299.1| transport protein [Campylobacter hominis ATCC BAA-381] Length = 339 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 2/121 (1%) Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 TI++ G+++GS + +P V G++ IM IP G+ ++ L+ GNI + Sbjct: 196 TIVSTATGIIIGSGLYYLNIPYAVLWGIVAFIMNYIPTIGSFVAAVPAVFIALLSGNISD 255 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMA 336 A + + I+ L P LVG + + + F L+ +G+ GLF+ P+ M Sbjct: 256 AIWVIILYTATNTILGVILEPRLVGEELGISTITVLFSLLLWGYVLGIGGLFLAVPLTMT 315 Query: 337 L 337 + Sbjct: 316 I 316 >gi|295400285|ref|ZP_06810264.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|294977560|gb|EFG53159.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] Length = 342 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 16/162 (9%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-- 258 +K R KVI + F IIA + + W+ P LG++ + +IP Sbjct: 190 RKFVRTFGKVIEAQF----IIATVNMAITVAGLWIMDFPQLFGLGILIFFLGLIPVAGVI 245 Query: 259 ----PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P+ F A SI G I + + A+ + L P L+ LP TF Sbjct: 246 ISLFPLCFIAYSI-----GGIMKVVYILIMIAVIHALEAYVLNPKLMSSKTNLPVFYTFI 300 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 L+ G+ GL +G PV + ++ V+ +++ +++ ++ Sbjct: 301 VLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDDDE 342 >gi|257899624|ref|ZP_05679277.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|293570808|ref|ZP_06681855.1| transport protein [Enterococcus faecium E980] gi|257837536|gb|EEV62610.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|291609076|gb|EFF38351.1| transport protein [Enterococcus faecium E980] Length = 379 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 181 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 236 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 237 FLAMRIFNQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 290 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 291 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 348 >gi|330506790|ref|YP_004383218.1| hypothetical protein MCON_0564 [Methanosaeta concilii GP-6] gi|328927598|gb|AEB67400.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 346 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 85/363 (23%), Positives = 143/363 (39%), Gaps = 68/363 (18%) Query: 13 RWM-----IMFIILVSLYFLKGFFAPVLSALIIG----FTSWPIYSSFISKKEESSTFLA 63 RW I+ + L ++ F P L +I+G + PI F +K+ S Sbjct: 7 RWCSEHKGILILALAAVLMTACFAFPFLDGIILGSVFAYVGRPIRDRFGKRKKLGSL--- 63 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQH------GIPVPRWLSDIPGG 116 V+ +C+ +VP+ + G LE+ + + LA NQ G + + +D+P Sbjct: 64 ----VAAICV-VVPIFLMLGLGSLEVATQI--IALAKNQEALRYWLGYLMQQTATDLPS- 115 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL-- 174 WA E LS ++ L + + I I R AS L II +I+ Sbjct: 116 -WARE---SLLSGLENAFGLIASLAASIPILQIGRMAS----------LGIINFLISFPI 161 Query: 175 -FFFYRDGFSISQQLDSL---GE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +F DG L SL GE + Y +I RI + F+G +I L+ Sbjct: 162 CYFILLDGEGFVGSLISLLPDGEMRVLERYIDRIDRI----LSGIFIGTVYTSIVGSLIA 217 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 ++L +P +AL I I M+P S +L+ ++ + L GA+ Sbjct: 218 AVIFFLFDIPRPIALASIVFIAGMVP-------VLTSWAVLVPLAVYRYFTVGLEGALFF 270 Query: 290 FIVDKTL---------RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ L RP+++ L L GG G+ G F+ P ++ I+ Sbjct: 271 LVISSALIYLPSELFIRPYIISTRSSLHPLLVMLSFFGGALVAGIGGFFLAPAVIGAISG 330 Query: 341 IWK 343 I++ Sbjct: 331 IYQ 333 >gi|319651659|ref|ZP_08005786.1| hypothetical protein HMPREF1013_02398 [Bacillus sp. 2_A_57_CT2] gi|317396726|gb|EFV77437.1| hypothetical protein HMPREF1013_02398 [Bacillus sp. 2_A_57_CT2] Length = 362 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 34/236 (14%) Query: 141 LKTNGIDFIPRFASRFGMIF----------LDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+T DFI R + L+Y + I + F+ +D FSI ++ Sbjct: 131 LQTRIDDFIVAVEKRLNNLLSKVITFFLNVLNYAVIIAVIPFISFYLLKD-FSIMKKA-- 187 Query: 191 LGEHLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L P W+K R V K + S G ++ G + +W+ + + LG Sbjct: 188 -AWYLTPRKWRKEGVLFLRDVDKSLGSYIRGQLLVCAAIGAISSLLFWIFDMRYPLLLGT 246 Query: 247 ITAIMAMIP------GGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 I + +IP G P I +A+S+ +++ FL G I L P Sbjct: 247 IIGVTNVIPYFGPIIGAVPAVIIASALSVKMIVITIGIIIVLQFLEGNI--------LSP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +VG + + L L+ G G+LGL I ++A+I V + +NK+ Sbjct: 299 LIVGKSLHMHPLLIMLALLAGGEAAGILGLIIAVPILAVIKVSIIHAKKHFSKNKQ 354 >gi|315453202|ref|YP_004073472.1| outer membrane protein [Helicobacter felis ATCC 49179] gi|315132254|emb|CBY82882.1| Outer membrane protein [Helicobacter felis ATCC 49179] Length = 353 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 63/305 (20%), Positives = 131/305 (42%), Gaps = 33/305 (10%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM--LEMKELVSKVVLANQHGIPVPRWLS 111 K F +++ V ++ ++PL F+ + + L L N+ V +L Sbjct: 47 DKYMRDLFSSLLCVVVLLSFLVIPLYFIIHQSVDFLSHINLEKLSFFFNKFKADVLIFLD 106 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 P ++ + HLS QS+ + ++ RF+S G L + ++ Sbjct: 107 RFPAINTDAKNFISHLS-AQSI------------MSYVLRFSSDIGKYSLKLASDTVMVL 153 Query: 172 IALF--FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + LF FFY F S L+ L + K I R V ++R L I + +G+ Sbjct: 154 VFLFLCFFYGRHFY-SYILEILPFEKIQS--KGIFREVAGILRVVLLTSIINVVLQGVAF 210 Query: 230 GS-AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 G+ W ++LG++ + ++IP G + + V++Y + + + A + ++ + Sbjct: 211 GALVVWFD--LDWLSLGILYGLASLIPIVGGSLVWIPVALYEMYRDHTTIAIVIAIYSIV 268 Query: 288 ELF-IVDKTLRPFLVGG--------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + ++D ++P+L+G +K+ + FF ++ G+ G G+ +GP + A Sbjct: 269 LIGGLIDSLIKPWLIGFIKHRILKISLKINEILIFFSILAGISKFGFWGIAVGPTITAFF 328 Query: 339 AVIWK 343 V+ + Sbjct: 329 IVLLR 333 >gi|167629939|ref|YP_001680438.1| domain of unknown function, putative [Heliobacterium modesticaldum Ice1] gi|167592679|gb|ABZ84427.1| domain of unknown function, putative [Heliobacterium modesticaldum Ice1] Length = 365 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 72/350 (20%), Positives = 143/350 (40%), Gaps = 50/350 (14%) Query: 3 ETMLNPQGIMRWMIMF------IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 ET L P+G RW I+ I+L+ Y L+ P A ++ + +P Sbjct: 23 ETAL-PKG--RWRILLVAGFWAIVLLLSYLLRQTLVPFAVAFVLAYLLYPGVVWL----- 74 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPG 115 E V++ ++V + L +GM + EL V Q+ + WL+ I Sbjct: 75 EKGGLSRVVSILAVFAVVFGGFASLIAFGMPRIFSELNRFSVQLPQYTQQMQAWLARIQQ 134 Query: 116 GMWAS-------ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 M S ++W+ L+ ++ + + +L + + + I+ Sbjct: 135 DMIQSGFPPGIQQVWSDTLARGEATILAAVRWLLESAVSLA------------ENAFDIV 182 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIG 224 + + F+F RD +I + +L A+ + +++RI+ V+R FL +A+ Sbjct: 183 LIPVMSFYFLRDWEAIGKGSLNLVPQNLRAHVQIVGGEVNRILRAVVRCNFL----MALV 238 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G++ L G+ + +G+I I +IP P+ ++ + + + L L+ Sbjct: 239 VGVLTTVGLTLIGLEYSLLIGIIAGIADLIPYFGPLIGMVPALVV----GLLESPRLALY 294 Query: 285 GAIELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + +V + L P L+G + L L F L+ G G++GL + Sbjct: 295 AVLIMIVVQQIEANLLSPKLLGDSVGLHPLAVIFALLAGGHLFGIVGLLL 344 >gi|254172650|ref|ZP_04879325.1| membrane protein [Thermococcus sp. AM4] gi|214033579|gb|EEB74406.1| membrane protein [Thermococcus sp. AM4] Length = 329 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 65/359 (18%) Query: 14 WMIMFIILVSLYFL--KGFFAPVLSALIIGFTSWPIYSSF---ISKKEESSTFLAVIATV 68 W I+ ++++ L +L +P++ AL + + ++PI+ I +K+ + AVIA + Sbjct: 8 WAIVTVVILYLVWLVVSPVVSPIILALAVAYVTYPIHERLSPKIGRKKAAFLLTAVIAVL 67 Query: 69 SVMCLFIVPLLFLFYYG-MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 S FLF G +L + ++ ++V + WL + + Sbjct: 68 S----------FLFLLGFVLWINDVKYQIVRYMEISF---NWLQSVT------------I 102 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSI 184 S + ++L+ T G+ SR + Y SI + + +F F Y Sbjct: 103 SSQRINEVLTAI---TEGVR------SRIEAYVISYTYSIPKLALEIFVMLFVYYGTLVN 153 Query: 185 SQQLDSLGEHLFPAYWKKI-------SRIVPKVIRSTFLGMTIIAIGEGLVLGS-AYWLA 236 ++++ +L P K+ +R + ++L ++++ G LG A+ +A Sbjct: 154 AEEIGRELYNLLPPQRKEFGIRLIEAARYTLDTLLKSWLTLSVLK-GSATALGFWAFRIA 212 Query: 237 GVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-- 292 +ALG++TA + ++P GG I V +YL+ + A FL+ + + Sbjct: 213 PTSGAIALGILTAFVELLPFLGGWLIWIPGV-VYLVHTSHYVLA---FLFAVYSIVFISP 268 Query: 293 --DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI---WKESI 346 D L P + L L + G+ GG+ GL+G+ IGPV + L+A + WK+++ Sbjct: 269 LPDFVLAPKMTLRRRGLNALISLLGIFGGLWAFGLVGIIIGPVSLGLLATVIEEWKKAM 327 >gi|77405418|ref|ZP_00782512.1| membrane protein, putative [Streptococcus agalactiae H36B] gi|77176000|gb|EAO78775.1| membrane protein, putative [Streptococcus agalactiae H36B] Length = 396 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 26/267 (9%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA--SELWTKHLSHPQSLKILSETFLKT 143 M ++ V+KV + I WL G + + S + ++ +S+ +E F K Sbjct: 119 MEDLPSYVNKVQMETSSFIDHNPWLKSYKGEISSMLSNISSQAVSY-------AEKFSK- 170 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N +D+ AS + ++ I LF+ RD ++ + +I Sbjct: 171 NVLDWAGNLASTVARV----TVATIMAPFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRI 226 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R + + G I+AI G++ Y + G+ V LG+I ++ M+P G+ ++ Sbjct: 227 LREMNSQMSGYVQGQIIVAITVGVIFSIMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQ 286 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR-----PFLVGGPIKLPFLPTFFGLV 317 V I L+ G + +F++++TL P ++G + + + F L+ Sbjct: 287 IPVFILALVAGPVMVVKVAI------VFVIEQTLEGRFVSPLVLGNKLSIHPITIMFILL 340 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G+F+ + A I V+ KE Sbjct: 341 TSGAMFGVWGVFLSIPIYASIKVVVKE 367 >gi|227552578|ref|ZP_03982627.1| permease [Enterococcus faecium TX1330] gi|257888193|ref|ZP_05667846.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896916|ref|ZP_05676569.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|227178327|gb|EEI59299.1| permease [Enterococcus faecium TX1330] gi|257824247|gb|EEV51179.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833481|gb|EEV59902.1| conserved hypothetical protein [Enterococcus faecium Com12] Length = 379 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 181 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 236 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 237 FLAMRIFNQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 290 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 291 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 348 >gi|296112696|ref|YP_003626634.1| hypothetical protein MCR_0469 [Moraxella catarrhalis RH4] gi|295920390|gb|ADG60741.1| conserved hypothetical protein [Moraxella catarrhalis RH4] gi|326560951|gb|EGE11316.1| hypothetical protein E9G_03819 [Moraxella catarrhalis 7169] gi|326563813|gb|EGE14064.1| hypothetical protein E9M_02703 [Moraxella catarrhalis 46P47B1] gi|326566826|gb|EGE16965.1| hypothetical protein E9K_00888 [Moraxella catarrhalis 103P14B1] gi|326567334|gb|EGE17449.1| hypothetical protein E9Q_05493 [Moraxella catarrhalis BC1] gi|326569849|gb|EGE19899.1| hypothetical protein E9U_06036 [Moraxella catarrhalis BC8] gi|326571545|gb|EGE21560.1| hypothetical protein E9S_02959 [Moraxella catarrhalis BC7] gi|326576739|gb|EGE26646.1| hypothetical protein E9Y_02005 [Moraxella catarrhalis 101P30B1] gi|326577585|gb|EGE27462.1| hypothetical protein EA1_02327 [Moraxella catarrhalis O35E] Length = 415 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 34/224 (15%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLS---------IIFMIIALFF-----FYRDGFSISQ 186 L+ N F+ RF S M +L L ++ II LF YR F Sbjct: 136 LRDNPQQFLTRF-SDGAMAYLPTYLGGMVSGMGTLVVITIIGLFLAISPSVYRRSFVAMV 194 Query: 187 QLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 DS E+L ++ + + LG ++ G+ G A WL G+P +AL Sbjct: 195 PKDSRDKAEYLLDRSYRSMQQ--------WLLGQLVVMAFVGIATGIALWLMGIPFALAL 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----TLRPFL 300 G I ++ +P P +A+ I LL + + + LW A+ + +V + + P + Sbjct: 247 GFIAFLLDFVPVLGP-WLSAIPILLL---TLIVSPKMLLWVALMIVVVQQLESYVISPIV 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + LP + V G+LG+ + LM ++ ++W + Sbjct: 303 QNRMVDLPPVALLLSQVIMGSITGILGIALATPLMVMV-IVWVQ 345 >gi|257885399|ref|ZP_05665052.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257821255|gb|EEV48385.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 379 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 181 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 236 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 237 FLAMRIFDQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 290 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 291 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 348 >gi|77411721|ref|ZP_00788059.1| membrane protein, putative [Streptococcus agalactiae CJB111] gi|77162229|gb|EAO73202.1| membrane protein, putative [Streptococcus agalactiae CJB111] Length = 396 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 34/271 (12%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA--SELWTKHLSHPQSLKILSETFLKT 143 M ++ V+KV + I WL G + + S + ++ +S+ +E F K Sbjct: 119 MEDLPSYVNKVQMETSSFIDHNPWLKSYKGEISSMLSNISSQAVSY-------AEKFSK- 170 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N +D+ AS + ++ I LF+ RD S+++ + + P ++ Sbjct: 171 NVLDWAGNLASTVARV----TVATIMAPFILFYLLRD----SRKMKNGFLMVLPTKLRQP 222 Query: 204 SRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + + + + S G I+AI G++ Y + G+ V LG+I ++ M+P G+ Sbjct: 223 TDRILREMNSQMSGYVQGQIIVAITVGVIFSIMYSIIGLRYGVTLGIIAGVLNMVPYLGS 282 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR-----PFLVGGPIKLPFLPTF 313 ++ V I L+ G + +F++++TL P ++G + + + Sbjct: 283 FVAQIPVFILALVAGPVMVVKVAI------VFVIEQTLEGRFVSPLVLGNKLSIHPITIM 336 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ G+ G+F+ + A I V+ KE Sbjct: 337 FILLTSGAMFGVWGVFLSIPIYASIKVVVKE 367 >gi|69245951|ref|ZP_00603723.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880352|ref|ZP_05660005.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257891011|ref|ZP_05670664.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257894264|ref|ZP_05673917.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614696|ref|ZP_05712466.1| membrane protein [Enterococcus faecium DO] gi|260562344|ref|ZP_05832858.1| conserved hypothetical protein [Enterococcus faecium C68] gi|293563178|ref|ZP_06677636.1| transport protein [Enterococcus faecium E1162] gi|314939360|ref|ZP_07846601.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314941563|ref|ZP_07848448.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314949610|ref|ZP_07852934.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314953717|ref|ZP_07856592.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992173|ref|ZP_07857617.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314997664|ref|ZP_07862594.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195481|gb|EAN09925.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814580|gb|EEV43338.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257827371|gb|EEV53997.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257830643|gb|EEV57250.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073268|gb|EEW61609.1| conserved hypothetical protein [Enterococcus faecium C68] gi|291604869|gb|EFF34345.1| transport protein [Enterococcus faecium E1162] gi|313588299|gb|EFR67144.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313593276|gb|EFR72121.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594301|gb|EFR73146.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313599622|gb|EFR78465.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641345|gb|EFS05925.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313644034|gb|EFS08614.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 379 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 181 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 236 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 237 FLAMRIFDQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 290 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 291 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 348 >gi|77407806|ref|ZP_00784559.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|77173553|gb|EAO76669.1| membrane protein, putative [Streptococcus agalactiae COH1] Length = 396 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 26/267 (9%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA--SELWTKHLSHPQSLKILSETFLKT 143 M ++ V+KV + I WL G + + S + ++ +S+ +E F K Sbjct: 119 MEDLPSYVNKVQMETSSFIDHNPWLKSYKGEISSMLSNISSQAVSY-------AEKFSK- 170 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N +D+ AS + ++ I LF+ RD ++ + +I Sbjct: 171 NVLDWAGNLASTVARV----TVATIMAPFILFYLLRDSRNMKNGFLMVLPTKLRQPADRI 226 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R + + G I+AI G++ Y + G+ V LG+I ++ M+P G+ ++ Sbjct: 227 LREMNSQMSGYVQGQIIVAITVGVIFSIMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQ 286 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR-----PFLVGGPIKLPFLPTFFGLV 317 V I L+ G + +F++++TL P ++G + + + F L+ Sbjct: 287 IPVFILALVAGPVMVVKVAI------VFVIEQTLEGRFVSPLVLGNKLSIHPITIMFILL 340 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G+F+ + A I V+ KE Sbjct: 341 TSGAMFGVWGVFLSIPIYASIKVVVKE 367 >gi|116491173|ref|YP_810717.1| permease [Oenococcus oeni PSU-1] gi|290890689|ref|ZP_06553759.1| hypothetical protein AWRIB429_1149 [Oenococcus oeni AWRIB429] gi|116091898|gb|ABJ57052.1| Predicted permease [Oenococcus oeni PSU-1] gi|290479664|gb|EFD88318.1| hypothetical protein AWRIB429_1149 [Oenococcus oeni AWRIB429] Length = 382 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 13/222 (5%) Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S+ +L TNGI + + MI +++I L++ +DG QL F Sbjct: 166 SKNYL-TNGIAGVGKITRVITMI----VITLITFPFILYYMLKDG----DQLPRYISQFF 216 Query: 197 PAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 PA + ++ + K I G + A+ ++ + + G+P + +G++ + Sbjct: 217 PARTRPSLLEVLHEINKQISDYLRGQILTAVAVSIMFMIGFSIIGLPYGIWIGLLAGPLN 276 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP +I + + G I + + IE + + + P ++G + + + Sbjct: 277 LIPYLGSFLVMVPAIIIALFGGIHLVIAVLIVFVIEQTLESRLIHPKIMGASMNIHPITV 336 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G GLLG+ G A++ V+ S +EN E Sbjct: 337 LVILLGAGEMFGLLGVAFGIPTYAVLKVLIGRSYHWWRENSE 378 >gi|312111198|ref|YP_003989514.1| hypothetical protein GY4MC1_2166 [Geobacillus sp. Y4.1MC1] gi|311216299|gb|ADP74903.1| protein of unknown function UPF0118 [Geobacillus sp. Y4.1MC1] Length = 342 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 16/162 (9%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-- 258 +K R KVI + F IIA + + W+ P LG++ + +IP Sbjct: 190 RKFVRTFGKVIEAQF----IIATVNMAITVAGLWIMDFPQLFGLGILIFFLGLIPVAGVI 245 Query: 259 ----PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P+ F A SI G I + + A+ + L P L+ LP TF Sbjct: 246 ISLFPLCFIAYSI-----GGIMKVVYVLIMIAVIHALEAYVLNPKLMSSKTNLPVFYTFI 300 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 L+ G+ GL +G PV + ++ V+ +++ +++ ++ Sbjct: 301 VLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDDDE 342 >gi|87123583|ref|ZP_01079434.1| hypothetical protein RS9917_06970 [Synechococcus sp. RS9917] gi|86169303|gb|EAQ70559.1| hypothetical protein RS9917_06970 [Synechococcus sp. RS9917] Length = 349 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 23/212 (10%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLD----- 162 ++ +PG + A+E W L + + L F L ++ + + R AS+ L Sbjct: 95 INALPGWLVAAEAWINRLQDLAASRGLPSEFGDLSSDLLTRVSRVASQLSQRLLAILGAT 154 Query: 163 ---YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGM 218 ++I +++A+FF G +I+ L P W++ + + + R F G Sbjct: 155 LGITINTVIVLVLAVFFLL-GGDAITAGL----ARWLPERWRQLVVSTITRTFRGYFAGQ 209 Query: 219 TIIAI--GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 ++A+ G ++ + + G+P V V+ + +IP + ++ AVS L ++ Sbjct: 210 VLLALILSAGQIV--VFTVIGIPYGVLFAVVIGLTTLIPYASALTIVAVSALLAVQDP-- 265 Query: 277 NATCLFLWGAIEL-FIVDKTLRPFLVGGPIKL 307 L AI + +VD+ ++P L+G + L Sbjct: 266 RTGLEILAAAIGVGQVVDQVIQPRLMGSIVGL 297 >gi|293400193|ref|ZP_06644339.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306593|gb|EFE47836.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 384 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 59/354 (16%) Query: 26 FLK---GFFAPVLSALIIGFT-SWPIY------SSFISKKEESS--------TFLAVIAT 67 FLK G AP+LS L++ F S P+ ++K + T + VIA Sbjct: 31 FLKSCIGLLAPILSGLLLAFVLSIPVRGLAKRLRRKLTKATDRQIDMISLLLTLICVIAI 90 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-----VVLANQHGIPVPRWLSDIPGGMWASEL 122 ++++C+ +P L + + LV + V L ++GI + + W S L Sbjct: 91 IALLCVIAIPQL---TASVKSIAALVQEKWPDWVGLLQRYGIDTEKLSAHFAALDWKSIL 147 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 QS+ T + + + A D +S++ F+ G+ Sbjct: 148 --------QSISSEMNTVISS-----VANVAGSTVSAIADVAISLVIT-----FYVLIGW 189 Query: 183 SISQQLDSLGEHLFPAYWKK--ISRI--VPKVIRSTFLGMTIIAIGEGLVLGS----AYW 234 ++L S + AY K+ RI + K+ T+ E ++LG+ ++ Sbjct: 190 ---RELSSQSKRALYAYCKESVADRICHISKLAHDTYAKFLSGQCVEVMILGTLIFLSFS 246 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +AG+P V+TA A +P G +S ++ L+ C ++ A + F+ + Sbjct: 247 VAGIPYAGLTAVLTAAFAFVPYIGGFLSCAFGILFTLLAAPNKALLCFIVYQATQ-FVEN 305 Query: 294 KTLRPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + P +VG + L PF L+GG + G+LG+ LMAL++ + ESI Sbjct: 306 QFIYPHVVGNSVGLSPFWTLLAVLLGG-KLFGVLGMIFFIPLMALVSQLLHESI 358 >gi|167037464|ref|YP_001665042.1| hypothetical protein Teth39_1051 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115878|ref|YP_004186037.1| hypothetical protein Thebr_1078 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856298|gb|ABY94706.1| protein of unknown function UPF0118 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928969|gb|ADV79654.1| protein of unknown function UPF0118 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 341 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 39/297 (13%) Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 FL V + + +IVPLL + +L+M +P + +I + Sbjct: 67 VFLIVASGILFFSFYIVPLLINEFIALLQM----------------IPFYAEEIQKLLI- 109 Query: 120 SELWTKHLSH--PQSLKILSETFLKTNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALF 175 +L +LS+ PQ K+L + N F S F + L + II + I F Sbjct: 110 -QLKFNYLSYLPPQVEKVLDKNLGSLNN-AFTYHIDSAFKSVITILKDAVDIIIIPIVTF 167 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 +F +D ++++ + + + KKI +I+ K +R+ T +AI + L Sbjct: 168 YFLKDKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLS- 226 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 L V +GV+ I+ +IP PI +SI + + ++ W I + Sbjct: 227 ---LIKVKYAFLIGVLAGILNIIPYVGPI----LSIIPTVLIGLLDSLTKGFWALIICLL 279 Query: 292 VDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 V + + P ++ + L + F L+ G G+ GL + ++A+I I E Sbjct: 280 VQQVENAFITPKIMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIE 336 >gi|240103708|ref|YP_002960017.1| hypothetical protein TGAM_1651 [Thermococcus gammatolerans EJ3] gi|239911262|gb|ACS34153.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 333 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 61/357 (17%) Query: 14 WMIMFIILVSLYFL--KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W I+ ++++ L +L +P++ AL + + ++P++ + K + A ++V+ Sbjct: 8 WAIVTVVILYLVWLVVSPVVSPIILALAVAYVTYPLHEKLLPKIGRRKAAFLLTAIIAVL 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 FLF G V+ N + R++ S W + ++ Sbjct: 68 S-------FLFLIGF---------VLWINDVKYQIVRYME-------ISFTWLQSVTV-S 103 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQL 188 S +I T G+ SR + Y SI + + +F F Y ++++ Sbjct: 104 SQRINEVLTAITEGVR------SRIESYIVSYTYSIPKLALEIFVMLFVYYGALVNAEEI 157 Query: 189 DSLGEHLFPAYWKKI-------SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP-- 239 +L P K+ +R + ++L ++++ +G +W G+ Sbjct: 158 GRELYNLLPPQRKEFGIRLIEAARYTLDTLLKSWLTLSVL---KGFATALGFWAFGIAPT 214 Query: 240 -SHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---- 292 +ALG++TA + ++P GG I V +YL+ N A FL+ + V Sbjct: 215 SGAIALGILTAFVELLPFLGGWLIWIPGV-VYLIHSSNYVLA---FLFAVYSIVFVSPLP 270 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI---WKESI 346 D L P + L L + G+ GG+ GL+G+ IGPV + L+A + WK+++ Sbjct: 271 DFVLAPKMTLRRRGLNALISLLGIFGGLWAFGLVGIIIGPVSLGLLATVIEEWKKAM 327 >gi|330752584|emb|CBL87530.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium] Length = 567 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 110 LSDIPGGMWASELWTKHLSHPQS--LKILSETFLKT---NGIDFIPRFASRFGMIFLDYC 164 L IPGG A T H +H L+I +E +LK G + + FA F +D Sbjct: 206 LQPIPGGAAARPFVTHHNAHNTKLYLRIANELYLKRLIVGGFEGVFEFAKDFRNEGMDRT 265 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F ++ L+ Y+D F + + ++L E + A KK Sbjct: 266 HNPEFTVMELYVAYKDYFWMMETTENLLESISYAIHKKTE 305 >gi|296333166|ref|ZP_06875619.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675328|ref|YP_003867000.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149364|gb|EFG90260.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413572|gb|ADM38691.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] Length = 353 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 16/148 (10%) Query: 194 HLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L P W+K R V + G ++ + G++ G +W+ G+P + LG+I+ Sbjct: 191 YLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVMAGITFWIFGLPYPLILGLISG 250 Query: 250 IMAMIP------GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I +IP G P A++I +K + +F I F+ L PF+VG Sbjct: 251 ITNVIPYFGPFIGAIPALLIAMTIS--VKAILVVVITVF----ILQFMEGNILSPFIVGR 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 +K+ + L+ G G++G+ + Sbjct: 305 SLKMHPVVIMLALLAGGELAGIVGMILA 332 >gi|261209281|ref|ZP_05923673.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289567000|ref|ZP_06447401.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553987|ref|ZP_06674589.1| transport protein [Enterococcus faecium E1039] gi|294615275|ref|ZP_06695152.1| transport protein [Enterococcus faecium E1636] gi|294617337|ref|ZP_06696976.1| transport protein [Enterococcus faecium E1679] gi|260076827|gb|EEW64562.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161201|gb|EFD09100.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291591872|gb|EFF23504.1| transport protein [Enterococcus faecium E1636] gi|291596410|gb|EFF27664.1| transport protein [Enterococcus faecium E1679] gi|291601844|gb|EFF32094.1| transport protein [Enterococcus faecium E1039] Length = 379 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 181 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 236 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 237 FLAMRIFDQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 290 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 291 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 348 >gi|257882205|ref|ZP_05661858.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|293568382|ref|ZP_06679703.1| transport protein [Enterococcus faecium E1071] gi|294623135|ref|ZP_06702021.1| transport protein [Enterococcus faecium U0317] gi|257817863|gb|EEV45191.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|291588903|gb|EFF20730.1| transport protein [Enterococcus faecium E1071] gi|291597504|gb|EFF28669.1| transport protein [Enterococcus faecium U0317] Length = 379 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L F ++DG +D+L H FP +K R K + T I + L++G Sbjct: 181 LLFMFKDGHKF---IDALS-HFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMS 236 Query: 234 WLA----GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI 287 +LA P + L VI I +IP P + A+ + L I F A L+ A+ Sbjct: 237 FLAMRIFDQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISP--FQA----LYMAL 290 Query: 288 ELFIVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ + ++P L G + + L L+G G+LG+ I + A+I I Sbjct: 291 SILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTI 348 >gi|228917024|ref|ZP_04080584.1| hypothetical protein bthur0012_42360 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929435|ref|ZP_04092456.1| hypothetical protein bthur0010_41200 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935711|ref|ZP_04098524.1| hypothetical protein bthur0009_41560 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948104|ref|ZP_04110388.1| hypothetical protein bthur0007_42300 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123931|ref|ZP_04253123.1| hypothetical protein bcere0016_42160 [Bacillus cereus 95/8201] gi|228659233|gb|EEL14881.1| hypothetical protein bcere0016_42160 [Bacillus cereus 95/8201] gi|228811462|gb|EEM57799.1| hypothetical protein bthur0007_42300 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823949|gb|EEM69768.1| hypothetical protein bthur0009_41560 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830223|gb|EEM75839.1| hypothetical protein bthur0010_41200 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842631|gb|EEM87719.1| hypothetical protein bthur0012_42360 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 361 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 356 Query: 343 KES 345 K+ Sbjct: 357 KKE 359 >gi|307265414|ref|ZP_07546970.1| sporulation integral membrane protein YtvI [Thermoanaerobacter wiegelii Rt8.B1] gi|326390340|ref|ZP_08211899.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus JW 200] gi|306919528|gb|EFN49746.1| sporulation integral membrane protein YtvI [Thermoanaerobacter wiegelii Rt8.B1] gi|325993617|gb|EGD52050.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus JW 200] Length = 354 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 20/235 (8%) Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFY 178 +++ P ++ L E +++ +++I FA L++ + + ++A FF Sbjct: 123 YVTLPPNITSLIENNMQS-ILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFIS 181 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG----MTIIAIGEGLVLGSAYW 234 +D Q + + P++W + ++ + + TF G + I + L + Sbjct: 182 KD----KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLA 237 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G LG++ I+ +P G + +++K + L L+G + +V Sbjct: 238 MIGFDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLV--VVV 295 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VG I L L T + G + G LGL IGPV + + + K I+ Sbjct: 296 RQMIEPKIVGQSIGLHPLVTLLSMFIGAKLFGALGLVIGPVFVVVFKALQKAEII 350 >gi|329923748|ref|ZP_08279143.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328941114|gb|EGG37416.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 379 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 80/173 (46%), Gaps = 2/173 (1%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F + LSII + LF+ +DG + Q++ S + + + + I S G Sbjct: 179 FTEIVLSIITVPFVLFYMLKDGKKLPQKILSFLPTQSRSGILHVLQDINHQISSFIRGQI 238 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 I+++ G++L Y + G+ + L +I + +++P G I+ T I L+ + Sbjct: 239 IVSVCIGILLYIGYMIIGLDYALILAIIASFTSVVPYLGPAIAITPALIVALVTSPVMLL 298 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + +W ++L I K + P ++G +K+ + F ++ G++G+ + Sbjct: 299 KMVAVWTIVQL-IEGKFISPQIMGKTLKIHPITIIFVILTAGNLFGVVGILLA 350 >gi|326575175|gb|EGE25103.1| hypothetical protein E9W_04228 [Moraxella catarrhalis CO72] Length = 415 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 34/224 (15%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLS---------IIFMIIALFF-----FYRDGFSISQ 186 L+ N F+ RF S M +L L ++ II LF YR F Sbjct: 136 LRDNPQQFLTRF-SDGAMAYLPTYLGGMVSGMGTLVVITIIGLFLAISPSVYRRSFVAMV 194 Query: 187 QLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 DS E+L ++ + + LG ++ G+ G A WL G+P +AL Sbjct: 195 PKDSRDKAEYLLDRSYRSMQQ--------WLLGQLVVMAFVGIATGIALWLMGIPFALAL 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----TLRPFL 300 G I ++ +P P +A+ I LL + + + LW A+ + +V + + P + Sbjct: 247 GFIAFLLDFVPVLGP-WLSAIPILLL---TLIVSPKMLLWVALMIVVVQQLESYVISPIV 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + LP + V G+LG+ + LM ++ ++W + Sbjct: 303 QNRMVDLPPVALLLSQVIMGSITGILGIALATPLMVMV-IVWVQ 345 >gi|86608241|ref|YP_477003.1| hypothetical protein CYB_0757 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556783|gb|ABD01740.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 417 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 18/171 (10%) Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D L + + P + I +V+ S LG+ I S +L +ALGVI Sbjct: 195 DRLAQQVHPMAQRMGGYIQGRVLVSAILGVMITV--------SLRFLGLSEFALALGVIA 246 Query: 249 AIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAI---ELFIVDKTLRPFLVGG 303 +IP P+ S A+ + ++ G F L L+ A+ E +++D P LVG Sbjct: 247 GFTNLIPFIGPVLGSLPALVVAIVQGGWTF-LWVLILYVAVQNLETYVLD----PLLVGS 301 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +++ L ++GG + +G++G I P +A +AV+ + + K+ E Sbjct: 302 SVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYLKPKQEAE 352 >gi|195978174|ref|YP_002123418.1| permease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974879|gb|ACG62405.1| permease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 375 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 7/181 (3%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGV 238 + QQ +L + Y K + +V ++ S F G + E ++LGS ++ + Sbjct: 197 ELCQQATTLIDTYTGKYAKTVHYLVG-LLHSRFRGFFVSQTLEAMILGSLTAIGMFILQL 255 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P +GV+ A A+IP GA I A+ L++ ++ A ++ I I + Sbjct: 256 PFAGTIGVLVAFTALIPVVGASIG-AAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIY 314 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P +VGG I LP + + G G++G+ + L A + + K+ I + +++ S Sbjct: 315 PRVVGGSIGLPAMWVLMAITIGAALKGIVGMIVAVPLAATLYQVVKDHIHKKQALQDRQS 374 Query: 358 S 358 + Sbjct: 375 N 375 >gi|315648828|ref|ZP_07901923.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] gi|315275796|gb|EFU39148.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] Length = 372 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 3/136 (2%) Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 + +I+I +V+ + Y L GV S A+G++ ++ ++P G I S+Y + ++ Sbjct: 231 LILISITAFIVMITLYAL-GVNSAFAIGLLIGLVDLLPYLGVGIVLIPWSLYAFMSDDLT 289 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L + +I + IV + + P ++ + L L FG+ G++ G+LGL IGPV + Sbjct: 290 LGIGLTVLYSI-ILIVRQIMEPKVLASSVGLDPLAALFGMFVGLKLFGILGLIIGPVSLV 348 Query: 337 LIAVIWKESIMAIKEN 352 ++ + + N Sbjct: 349 IVDAFRRAHVFKDLRN 364 >gi|282880125|ref|ZP_06288845.1| membrane family protein [Prevotella timonensis CRIS 5C-B1] gi|281305998|gb|EFA98038.1| membrane family protein [Prevotella timonensis CRIS 5C-B1] Length = 385 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 40/201 (19%), Positives = 85/201 (42%), Gaps = 13/201 (6%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPA----YWKKISRIVPKVIRSTFLGM 218 SII ++A F I Q + L ++ +FP +W ++ + V + + + G Sbjct: 174 SIIISVVASLITLLYTFFILQDYEFLTDNWIRIFPKKNRPFWSELMQDVERELNNYIRGQ 233 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 ++++ G++ G + P +ALG++ +M ++P ++ ++ ++K Sbjct: 234 GLVSLCLGILFGIGLTIIDFPMAIALGIMMGLMNLVPYLHTLALVPMAFLAMLKAADTGQ 293 Query: 279 TCLFLWG------AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L ++G I I D L P ++G + L L +G +GL + Sbjct: 294 NFLIVFGLSLLVFLIVQVISDTVLTPKIMGKAMNLNPAILLLSLSIWGTLLGFIGLIVAL 353 Query: 333 VLMALIAVIWKESIMAIKENK 353 L L+ WK+ + K+ + Sbjct: 354 PLTTLLIAYWKKYVTQEKQQE 374 >gi|317128236|ref|YP_004094518.1| hypothetical protein Bcell_1524 [Bacillus cellulosilyticus DSM 2522] gi|315473184|gb|ADU29787.1| protein of unknown function UPF0118 [Bacillus cellulosilyticus DSM 2522] Length = 358 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 34/246 (13%) Query: 129 HPQSLKILSETFLKT------NGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYR 179 H Q+ ++L TF + +G +I + G+I D+ L +I + +F+ + Sbjct: 122 HAQT-EVLPSTFQEQVEGWMESGEAYIAESITSIGLIIRQLFDWMLLLIVIPFIVFYLLK 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWL 235 D + + ++ P W+K + K I + G ++ I G++ +W+ Sbjct: 181 D----MDLVKKVCWYITPDRWRKEGASLVKEIDHSLGNYIRGQILVCIVVGILAYIGFWI 236 Query: 236 AGVPSHVALGVITAIMAMIP------GGAPISFTAV--SIYLLIKGNIFNATCLFLWGAI 287 +P V L V + +IP G P+ F A+ S L+I G I N + G + Sbjct: 237 IDMPYAVLLAVFIGLTNIIPYFGPIIGVIPVVFIALTESFQLVILGLIVNFIVQIIEGNL 296 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P +VG + + + F LV G G++GL I ++ ++ VI Sbjct: 297 --------IAPLIVGKTLHMHPVLIIFALVVGGELGGVIGLIISVPILTVLRVILLHIRQ 348 Query: 348 AIKENK 353 ++E K Sbjct: 349 IVRERK 354 >gi|118479551|ref|YP_896702.1| permease [Bacillus thuringiensis str. Al Hakam] gi|229186630|ref|ZP_04313791.1| hypothetical protein bcere0004_41730 [Bacillus cereus BGSC 6E1] gi|118418776|gb|ABK87195.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|228596889|gb|EEK54548.1| hypothetical protein bcere0004_41730 [Bacillus cereus BGSC 6E1] Length = 361 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKAGITIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 356 Query: 343 KES 345 K+ Sbjct: 357 KKE 359 >gi|253989272|ref|YP_003040628.1| permease perm [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780722|emb|CAQ83884.1| putative permease perm [Photorhabdus asymbiotica] Length = 359 Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 36/237 (15%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWPIYSSFISKKEESST 60 R +PQ I ++I+ + +YFL G AP+L A+++ + WP +S + K Sbjct: 10 RRRFTDPQVIALFIILVVGFCIIYFLHGILAPLLVAIVLAYLLEWP--TSMLEK------ 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--- 117 L TV+V + I+ + G+ + L+ A Q G+ + LSDIP + Sbjct: 62 -LGCSRTVAVCIVLII------FSGISALVILIVAPT-AWQQGLNL---LSDIPNMLNRF 110 Query: 118 --WASELWTKH--LSHPQSLKILSETF---LKTNGIDFIP-RFASRFGMIFLDYCLSIIF 169 +A L T++ L + +++E + T G + AS G++ L + +I Sbjct: 111 NEYAQTLPTRYPVLVDAGIIDMMAENLRSKISTAGESVVKFSVASLIGLLTL--AIYLIL 168 Query: 170 MIIALFFFYRDGFSISQQLDSL---GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + + FF +D + Q L + L W+++++ + IR M I+ I Sbjct: 169 VPLMAFFLLKDKNQMLQALQRVLPRNRILAGQVWREMNQQITNYIRGKVTEMVIVGI 225 >gi|300812733|ref|ZP_07093140.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496273|gb|EFK31388.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 393 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 2/169 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG + L + K+ V + + S +G +AI G++ Y Sbjct: 192 LFFMLKDGHKLRPFLVKFAPQRWEQATSKLLHEVNQAVSSYVIGQVSVAICVGIMFFIGY 251 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G P AL + + +IP G I I L+ A L ++ IE I Sbjct: 252 TIIGEPYGAALAICAGFLNLIPYFGTFIGLIPALIIALVTNLPMVAKVLVVF-FIEQIIE 310 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P +VG +K+ + T ++G GL G+ G + A++ ++ Sbjct: 311 TRVISPLVVGNRLKMHPVTTIIVMLGAGSVWGLWGVIGGIPIYAVMKIL 359 >gi|320526967|ref|ZP_08028156.1| hypothetical protein HMPREF9430_00255 [Solobacterium moorei F0204] gi|320132552|gb|EFW25093.1| hypothetical protein HMPREF9430_00255 [Solobacterium moorei F0204] Length = 380 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 5/189 (2%) Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGE 225 MIIAL+ D ++ +Q+ + L P K +R+ S G + ++ Sbjct: 189 MIIALYILL-DEINLKRQIKKVLYALLPEKTTKSILRTTRLTINTFNSFVAGKAVDSLII 247 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ +P + V+ + MIP P SI +L+ + F A ++ Sbjct: 248 GILCYIILSFMKMPYTPLISVVVGVTNMIPVFGPFLGAVPSILILLLVDPFKALEFSIFV 307 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I + + P ++GG + LP L F ++ G G++G+FIG + ++I V+ E Sbjct: 308 LILQQVDGNIIGPRILGGAVGLPTLYVMFAIIIGGALFGIVGMFIGVPVFSVIFVLVSEF 367 Query: 346 IMAIKENKE 354 I + K Sbjct: 368 IHRQLDRKN 376 >gi|302875978|ref|YP_003844611.1| hypothetical protein Clocel_3161 [Clostridium cellulovorans 743B] gi|307686694|ref|ZP_07629140.1| hypothetical protein Ccel74_00981 [Clostridium cellulovorans 743B] gi|302578835|gb|ADL52847.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 307 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 8/151 (5%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI++ FL IA+ ++ A W+ G P + LG + +++ IP G IS +S+ Sbjct: 162 KVIQAQFL----IALVNSILSIIALWIMGFPQLIGLGFMIFVLSFIPVAGVIISLIPLSL 217 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + + + A+ L P L+ LP F L+ G MG+ G Sbjct: 218 IAFKIGGVTKLISVIIMIALLHSFESYVLNPKLISDKTSLPIFFIFAILILGKEFMGMWG 277 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L +G L I I I+ E+ +KI + Sbjct: 278 LLLGIPLFIFILDILDVKIV---EDSKKIKN 305 >gi|260584716|ref|ZP_05852462.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] gi|260157739|gb|EEW92809.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] Length = 362 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 33/272 (12%) Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG-IDFIPRFASRFGM 158 +Q G + L+ + + +SE TK + I ++ + I F+ S G Sbjct: 104 SQLGTVLSTVLTQLGKLLGSSEFVTKDMLSTIVSGIQGQSSSISQALIGFLSGLTSNIGN 163 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK--VIRSTFL 216 IF L F+II F + S EHL + + +P+ VI+ T++ Sbjct: 164 IF--SSLMNAFLIIVFTFLFL----------SSKEHLAAMTSRLLKVFLPEKVVIKLTYI 211 Query: 217 GMT-------------IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISF 262 G I A+ G+++ Y + G+P V G+ +++ IP P I+ Sbjct: 212 GQVALETYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGVMTGIFAGVLSFIPYVGPMIAC 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I++ L L+ I+L I + P +VG I LP L T G Sbjct: 272 VVGAIFIFTVSPTQALLSLLLYQVIQL-IEGNLIYPRVVGQSIGLPALFTLAAASIGGNL 330 Query: 323 MGLLGL-FIGPVLMALIAVIWKESIMAIKENK 353 GLLG+ F PV A+I + KE ++A KEN+ Sbjct: 331 FGLLGMIFFTPVF-AVIYRLVKEFVVA-KENQ 360 >gi|84385148|ref|ZP_00988180.1| hypothetical membrane spanning protein [Vibrio splendidus 12B01] gi|84379745|gb|EAP96596.1| hypothetical membrane spanning protein [Vibrio splendidus 12B01] Length = 366 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 2/190 (1%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + AS G + + II IIA F + + L L ++ ++ Sbjct: 150 FASKMASILGSLGGGFVQFIISTIIA-GAFMSNADKCQTGVTHLVVRLTDGKGVELVQLS 208 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +RS G+ +A+ + ++ +AGVP+ + ++A+I ++ I Sbjct: 209 KSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAALWALAVLLVAIIQLPPILALLPAII 268 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 Y+ + A+ +W I + D L+P L+ +P L G +GG+ G++G Sbjct: 269 YMFSVESTLAASLFLVW-CILVSGSDAILKPVLLSRGSHIPMLVILLGALGGMAMSGIVG 327 Query: 328 LFIGPVLMAL 337 LF+G V+++L Sbjct: 328 LFVGAVILSL 337 >gi|309808761|ref|ZP_07702647.1| putative membrane protein [Lactobacillus iners LactinV 01V1-a] gi|309810014|ref|ZP_07703861.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D] gi|312870682|ref|ZP_07730790.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a] gi|308167997|gb|EFO70129.1| putative membrane protein [Lactobacillus iners LactinV 01V1-a] gi|308169654|gb|EFO71700.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D] gi|311093793|gb|EFQ52129.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a] Length = 380 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 2/182 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG I+ L S + K+ + + S G I+A G++ Y Sbjct: 197 LFFMLKDGKKINPYLTSFMPPRLQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGY 256 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+ + L ++ A + +IP G IS I ++ + +F+ IE I Sbjct: 257 TTIGLKYGLTLAILAACLNLIPYFGTLISLIPAIIIGILDSPVM-LLKIFVVFFIEQLIE 315 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P ++G +K+ + T L+G GLLG+ + A I +I + ++N Sbjct: 316 GRFISPLVMGSKMKMNPVTTILLLIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 Query: 353 KE 354 Sbjct: 376 SS 377 >gi|114332236|ref|YP_748458.1| hypothetical protein Neut_2276 [Nitrosomonas eutropha C91] gi|114309250|gb|ABI60493.1| protein of unknown function UPF0118 [Nitrosomonas eutropha C91] Length = 363 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 70/369 (18%), Positives = 153/369 (41%), Gaps = 31/369 (8%) Query: 7 NPQGIMRWMIMFIILVS--LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +P W + I +VS +Y L P L A I + PI + ++ ++ T V Sbjct: 6 SPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVT-WLEVRKVPRTLSTV 64 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASEL 122 + + +FI +L + E+ L+ ++ P +L + + W + Sbjct: 65 FVMLMAIGIFITMILIMLPLFEKEISRLIERI----------PSFLDMLSNRLIPWVEGV 114 Query: 123 WTKHLSHPQSL--KILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + L + +L+E + G+ +P S G++ L + +++I + + LF+ Sbjct: 115 FNIELQIDVDMLKDLLAEHWQSAGGVAARALPTLKSG-GLVILGFLINLILVPVVLFYLL 173 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 RD + +Q GE + PA+ K+I SR V+ G + + + WL Sbjct: 174 RDWNILIKQ---AGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWL 230 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI--ELFIVD 293 G+ + +G+++ ++ +P I+ ++ + + ++ + +W I + Sbjct: 231 VGLEFSLPIGLLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEG 290 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE---SIMAIK 350 + P LVG I L + F L+ + G +G+ + + A++ V+ + M + Sbjct: 291 MLITPRLVGERIGLHPVAVIFSLMAFGQLFGFIGILLALPISAILLVLLRHLHTQYMEVM 350 Query: 351 ENKEKISSN 359 E+ E ++ Sbjct: 351 EDDETRAAK 359 >gi|261405442|ref|YP_003241683.1| hypothetical protein GYMC10_1593 [Paenibacillus sp. Y412MC10] gi|329926788|ref|ZP_08281196.1| putative membrane protein [Paenibacillus sp. HGF5] gi|261281905|gb|ACX63876.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] gi|328938988|gb|EGG35356.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 355 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 69/359 (19%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI-----ATV 68 W++ + L FLK AP L A+II + PI + +K S + +I ++ Sbjct: 27 WLLRPLFLDVYRFLKAVLAPFLVAMIISYVLNPIVCTLSDRKVPRSIAVLLIYAVFLTSL 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V+ + ++P+L + +++EL N+H +P M A L T S Sbjct: 87 AVILINMIPML------IRQLEEL-------NEH---LPEL------SMNAQSLMTNLDS 124 Query: 129 H--PQSLK-------ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 P ++ + E+ L DF+ + ++F +++ + +F+ + Sbjct: 125 RLLPPGVRTGVNSWFLQMESRLAGGISDFMDNIGNTINILF-----NVLIVPFLIFYILK 179 Query: 180 DGFSISQQ-----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 D F + Q+ L K+I + +R FL II G++ Y Sbjct: 180 D-FEVFQRTAVSYLPRSRRKSIVTLLKEIDTALGNYVRGQFLVCLII----GVLAYVGYM 234 Query: 235 LAGVPSHVALGVITAIMAMIP------GGAP--ISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G+P + L I A+ +IP G AP + + +S +++ + N C L Sbjct: 235 IVGMPYALLLASIVAVFNIIPYLGPFLGAAPALVMASTISWRMVLLVAVVNMVCQTLESN 294 Query: 287 IELFIVDKTLRPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P +VG + + P L F LVGG + G +GL + + A+I V+ + Sbjct: 295 V--------ISPQVVGKKLHMHPLLIIFALLVGG-QVAGTVGLILAVPVFAVIKVLLQH 344 >gi|22537352|ref|NP_688203.1| hypothetical protein SAG1194 [Streptococcus agalactiae 2603V/R] gi|22534224|gb|AAN00076.1|AE014246_11 membrane protein, putative [Streptococcus agalactiae 2603V/R] Length = 396 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 26/267 (9%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA--SELWTKHLSHPQSLKILSETFLKT 143 M ++ V+KV + I WL G + + S + ++ +S+ +E F K Sbjct: 119 MEDLPSYVNKVQMETSSFIDHNPWLKSYKGEISSMLSNISSQAVSY-------AEKFSK- 170 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N +D+ AS + ++ I LF+ RD ++ + +I Sbjct: 171 NILDWAGNLASTVARV----TVATIMAPFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRI 226 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R + + G I+AI G++ Y + G+ V LG+I ++ M+P G+ ++ Sbjct: 227 LREMNSQMSGYVQGQIIVAITVGVIFSIMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQ 286 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR-----PFLVGGPIKLPFLPTFFGLV 317 V I L+ G + +F++++TL P ++G + + + F L+ Sbjct: 287 IPVFILALVAGPVMVVKVAI------VFVIEQTLEGRFVSPLVLGNKLSIHPITIMFILL 340 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G+F+ + A I V+ KE Sbjct: 341 TSGAMFGVWGVFLSIPIYASIKVVVKE 367 >gi|326563941|gb|EGE14191.1| hypothetical protein E9O_07758 [Moraxella catarrhalis 12P80B1] Length = 385 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 45/250 (18%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLS---------IIFMIIALFF-----FYRDGFSISQ 186 L+ N F+ RF S M +L L ++ II LF YR F Sbjct: 136 LRDNPQQFLTRF-SDGAMAYLPTYLGGMVSGMGTLVVITIIGLFLAISPSVYRRSFVAMV 194 Query: 187 QLDSL--GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 DS E+L ++ + + LG ++ G+ G A WL G+P +AL Sbjct: 195 PKDSRDKAEYLLDRSYRSMQQ--------WLLGQLVVMAFVGIATGIALWLMGIPFALAL 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK----TLRPFL 300 G I ++ +P P +A+ I LL + + + LW A+ + +V + + P + Sbjct: 247 GFIAFLLDFVPVLGP-WLSAIPILLL---TLIVSPKMLLWVALMIVVVQQLESYVISPIV 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-----------SIMAI 349 + LP + V G+LG+ + LM ++ ++W + ++ + Sbjct: 303 QNRMVDLPPVALLLSQVIMGSITGILGIALATPLMVMV-IVWVQVLYIKFTLGDYAVRIL 361 Query: 350 KENKEKISSN 359 +N+ ++ ++ Sbjct: 362 DQNESQMQAD 371 >gi|315653902|ref|ZP_07906818.1| permease [Lactobacillus iners ATCC 55195] gi|315488598|gb|EFU78244.1| permease [Lactobacillus iners ATCC 55195] Length = 380 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 2/182 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG I+ L S + K+ + + S G I+A G++ Y Sbjct: 197 LFFMLKDGKKINPYLTSFMPPRLQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGY 256 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+ + L ++ A + +IP G IS I ++ + +F+ IE I Sbjct: 257 TTIGLKYGLTLAILAACLNLIPYFGTLISLIPAIIIGILDSPVM-LLKIFVVFFIEQLIE 315 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P ++G +K+ + T L+G GLLG+ + A I +I + ++N Sbjct: 316 GRFISPLVMGSKMKMNPVTTILLLIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 Query: 353 KE 354 Sbjct: 376 SS 377 >gi|312874325|ref|ZP_07734356.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d] gi|325911463|ref|ZP_08173875.1| putative membrane protein [Lactobacillus iners UPII 143-D] gi|325913113|ref|ZP_08175483.1| putative membrane protein [Lactobacillus iners UPII 60-B] gi|311090091|gb|EFQ48504.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d] gi|325476813|gb|EGC79967.1| putative membrane protein [Lactobacillus iners UPII 143-D] gi|325477534|gb|EGC80676.1| putative membrane protein [Lactobacillus iners UPII 60-B] Length = 380 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 2/182 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG I+ L S + K+ + + S G I+A G++ Y Sbjct: 197 LFFMLKDGKKINPYLTSFMPPRLQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGY 256 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+ + L ++ A + +IP G IS I ++ + +F+ IE I Sbjct: 257 TTIGLKYGLTLAILAACLNLIPYFGTLISLIPAIIIGILDSPVM-LLKIFVVFFIEQLIE 315 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P ++G +K+ + T L+G GLLG+ + A I +I + ++N Sbjct: 316 GRFISPLVMGSKMKMNPVTTILLLIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 Query: 353 KE 354 Sbjct: 376 SS 377 >gi|259501038|ref|ZP_05743940.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|302190513|ref|ZP_07266767.1| permease [Lactobacillus iners AB-1] gi|329920543|ref|ZP_08277275.1| putative membrane protein [Lactobacillus iners SPIN 1401G] gi|259167732|gb|EEW52227.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|328936219|gb|EGG32672.1| putative membrane protein [Lactobacillus iners SPIN 1401G] Length = 380 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 2/182 (1%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +DG I+ L S + K+ + + S G I+A G++ Y Sbjct: 197 LFFMLKDGKKINPYLTSFMPPRLQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGY 256 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+ + L ++ A + +IP G IS I ++ + +F+ IE I Sbjct: 257 TTIGLKYGLTLAILAACLNLIPYFGTLISLIPAIIIGILDSPVM-LLKIFVVFFIEQLIE 315 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P ++G +K+ + T L+G GLLG+ + A I +I + ++N Sbjct: 316 GRFISPLVMGSKMKMNPVTTILLLIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 Query: 353 KE 354 Sbjct: 376 SS 377 >gi|86145809|ref|ZP_01064138.1| hypothetical membrane spanning protein [Vibrio sp. MED222] gi|85836508|gb|EAQ54637.1| hypothetical membrane spanning protein [Vibrio sp. MED222] Length = 366 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 2/190 (1%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + AS G + + II IIA F + + L L ++ ++ Sbjct: 150 FASKMASILGSLGGGFVQFIISTIIA-GAFMSNADKCQTGVTHLVVRLTDGKGVELVQLS 208 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +RS G+ +A+ + ++ +AGVP+ + ++A+I ++ I Sbjct: 209 KSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAALWALAVLLVAIIQLPPILALLPAII 268 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 Y+ + A+ +W I + D L+P L+ +P L G +GG+ G++G Sbjct: 269 YMFSVESTLAASLFLVW-CILVSGSDAILKPVLLSRGSHIPMLVILLGALGGMAMSGIVG 327 Query: 328 LFIGPVLMAL 337 LF+G V+++L Sbjct: 328 LFVGAVILSL 337 >gi|229163339|ref|ZP_04291291.1| hypothetical protein bcere0009_41050 [Bacillus cereus R309803] gi|228620120|gb|EEK76994.1| hypothetical protein bcere0009_41050 [Bacillus cereus R309803] Length = 361 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A FL I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIAATVSTSLLIKAGITIAILQFLESNI-- 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P++VG +++ + L+ G G++GL + ++A+I + Sbjct: 303 ------LSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLVSVPILAVIRTV 348 >gi|116872852|ref|YP_849633.1| integral membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741730|emb|CAK20854.1| conserved integral membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 345 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 30/163 (18%) Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 KVI + F IIA+ ++ A W+ G P + L ++ ++ +IP G IS ++I Sbjct: 197 KVIEAQF----IIALVNAVLTTIALWILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTI 252 Query: 268 ------------YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 Y+LI + + A+E ++ L P L+ LP TF Sbjct: 253 IGYSIGGLEYIFYILI--------VVIIIHALESYV----LNPKLMSAKTNLPVFYTFII 300 Query: 316 LVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ G G+ GL +G PV+M + V+ + ++ K+ IS Sbjct: 301 LIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEDEQLKDTIS 343 >gi|206970693|ref|ZP_03231645.1| membrane protein [Bacillus cereus AH1134] gi|206734329|gb|EDZ51499.1| membrane protein [Bacillus cereus AH1134] Length = 340 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 7/159 (4%) Query: 198 AYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 AY+ ++ +R KVI + FL IA+ G++ A + G P + L V+ ++ +IP Sbjct: 185 AYFGERFARSFGKVIEAQFL----IAVVNGVLTVIALVILGFPQLLVLTVMVFLLGLIPV 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G IS + I G + + ++ + + L P + LP TF Sbjct: 241 AGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMSAKTNLPVFYTFMI 300 Query: 316 LVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 L+ +G+ GL IG P+ + L+ V+ + IK NK Sbjct: 301 LIFSEHFLGIWGLIIGIPIFIFLLDVLDVNNDEPIKSNK 339 >gi|30264460|ref|NP_846837.1| hypothetical protein BA_4618 [Bacillus anthracis str. Ames] gi|47529918|ref|YP_021267.1| hypothetical protein GBAA_4618 [Bacillus anthracis str. 'Ames Ancestor'] gi|49187282|ref|YP_030534.1| hypothetical protein BAS4286 [Bacillus anthracis str. Sterne] gi|49478624|ref|YP_038441.1| hypothetical protein BT9727_4123 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141116|ref|YP_085713.1| hypothetical protein BCZK4134 [Bacillus cereus E33L] gi|165872760|ref|ZP_02217388.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167636499|ref|ZP_02394796.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167638692|ref|ZP_02396968.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170689642|ref|ZP_02880824.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170709393|ref|ZP_02899804.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177653234|ref|ZP_02935486.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190566844|ref|ZP_03019760.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196034451|ref|ZP_03101860.1| putative membrane protein [Bacillus cereus W] gi|218905585|ref|YP_002453419.1| hypothetical protein BCAH820_4470 [Bacillus cereus AH820] gi|225866372|ref|YP_002751750.1| hypothetical protein BCA_4502 [Bacillus cereus 03BB102] gi|227817169|ref|YP_002817178.1| hypothetical protein BAMEG_4655 [Bacillus anthracis str. CDC 684] gi|229601469|ref|YP_002868677.1| hypothetical protein BAA_4638 [Bacillus anthracis str. A0248] gi|254684146|ref|ZP_05148006.1| hypothetical protein BantC_09855 [Bacillus anthracis str. CNEVA-9066] gi|254724683|ref|ZP_05186466.1| hypothetical protein BantA1_19790 [Bacillus anthracis str. A1055] gi|254736493|ref|ZP_05194199.1| hypothetical protein BantWNA_15131 [Bacillus anthracis str. Western North America USA6153] gi|254741531|ref|ZP_05199218.1| hypothetical protein BantKB_11057 [Bacillus anthracis str. Kruger B] gi|254751370|ref|ZP_05203407.1| hypothetical protein BantV_02826 [Bacillus anthracis str. Vollum] gi|254757702|ref|ZP_05209729.1| hypothetical protein BantA9_05266 [Bacillus anthracis str. Australia 94] gi|301055899|ref|YP_003794110.1| membrane protein [Bacillus anthracis CI] gi|30259118|gb|AAP28323.1| putative membrane protein [Bacillus anthracis str. Ames] gi|47505066|gb|AAT33742.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181209|gb|AAT56585.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49330180|gb|AAT60826.1| probable membrane protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974585|gb|AAU16135.1| probable membrane protein [Bacillus cereus E33L] gi|164711536|gb|EDR17085.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167513540|gb|EDR88910.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167528092|gb|EDR90889.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170125692|gb|EDS94608.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170666412|gb|EDT17193.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172081516|gb|EDT66588.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190561835|gb|EDV15804.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195992993|gb|EDX56952.1| putative membrane protein [Bacillus cereus W] gi|218540217|gb|ACK92615.1| putative membrane protein [Bacillus cereus AH820] gi|225785955|gb|ACO26172.1| putative membrane protein [Bacillus cereus 03BB102] gi|227003791|gb|ACP13534.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229265877|gb|ACQ47514.1| putative membrane protein [Bacillus anthracis str. A0248] gi|300378068|gb|ADK06972.1| conserved hypothetical membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 355 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKAGITIA--------ILQ 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 291 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 350 Query: 343 KES 345 K+ Sbjct: 351 KKE 353 >gi|300119211|ref|ZP_07056908.1| hypothetical protein BCSJ1_23269 [Bacillus cereus SJ1] gi|298723431|gb|EFI64176.1| hypothetical protein BCSJ1_23269 [Bacillus cereus SJ1] Length = 355 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKAGITIA--------ILQ 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 291 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 350 Query: 343 KES 345 K+ Sbjct: 351 KKE 353 >gi|291288291|ref|YP_003505107.1| hypothetical protein Dacet_2389 [Denitrovibrio acetiphilus DSM 12809] gi|290885451|gb|ADD69151.1| protein of unknown function UPF0118 [Denitrovibrio acetiphilus DSM 12809] Length = 342 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 10/180 (5%) Query: 172 IALFFFYRDGFSISQQL-DSLGEHLFPAYWKKISRIV---PKVIRSTFLGMTIIAIGEGL 227 I +F+F +D I+ ++ D+L Y I R + K++ + F G I+A G+ Sbjct: 165 ILVFYFLKDFDRINTKIFDALNRK----YDNDIKRYITEFDKILSAYFRGQLIVAAILGV 220 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK-GNIFNATCLFLWG 285 + + G+ V +G+++ +++++P G I F A I ++ +I + +F+ Sbjct: 221 LYTIILLVVGIKPAVLIGIVSGVLSVVPYLGFIIGFAASLILAFVQFQDILHPLMVFIGF 280 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 A+ I + P +VG + L F L+ G G+ G+ I + A I ++ E Sbjct: 281 AVVQAIEGNLITPKIVGESLGLHPTAVIFALLAGGSLFGIGGMIIALPVAAFIKILLSEQ 340 >gi|251782288|ref|YP_002996590.1| hypothetical protein SDEG_0877 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390917|dbj|BAH81376.1| hypothetical protein SDEG_0877 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127187|gb|ADX24484.1| hypothetical protein SDE12394_04950 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 375 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 63/292 (21%), Positives = 123/292 (42%), Gaps = 45/292 (15%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA++S + F P +KE+V+++ +H + R + I G ++ T Sbjct: 105 IASISTLTKFDTP----------SIKEVVNQL----EHNKLLARVIKYIGGDAKLTQTIT 150 Query: 125 KHLSHPQSLKILSETFLK------TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + S+ LK TN + + AS +F+ + S+ + Sbjct: 151 SY----------SQQLLKQFIGVLTNILTSVTVIASAIINLFISFVFSL--------YVL 192 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS----AYW 234 + S+ +Q ++L + Y ++I +V ++ F G + E ++LG+ + Sbjct: 193 ANKESLCRQGNTLVDTYTGKYAQRIHYLV-DLLHHRFHGFFVSQTLEAMILGTLTTTGMF 251 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L +P +GV+ A A+IP GA I A+ L++ ++ A ++ I I Sbjct: 252 LLQLPFAGTIGVLVAFTALIPVVGASIG-AAIGFVLIMTQSMSQAIVFIVFLIILQQIEG 310 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P +VGG I LP + + G G++G+ I L A + + K++ Sbjct: 311 NFIYPRVVGGSIGLPAMWVLMAITIGASLRGIVGMIIAVPLAATLYQVIKDN 362 >gi|319649707|ref|ZP_08003863.1| hypothetical protein HMPREF1013_00467 [Bacillus sp. 2_A_57_CT2] gi|317398869|gb|EFV79551.1| hypothetical protein HMPREF1013_00467 [Bacillus sp. 2_A_57_CT2] Length = 352 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +++ L+ G++ T L + A+ L I+ +T+ P ++G I L L T + G++ +G+ Sbjct: 266 ALFHLLTGDLAMGTQLAILAAV-LLIIRRTVEPKVMGTHIGLSPLATLIAMYLGLKLIGI 324 Query: 326 LGLFIGPVLM 335 LG IGP+L+ Sbjct: 325 LGFIIGPLLV 334 >gi|291296851|ref|YP_003508249.1| hypothetical protein Mrub_2478 [Meiothermus ruber DSM 1279] gi|290471810|gb|ADD29229.1| protein of unknown function UPF0118 [Meiothermus ruber DSM 1279] Length = 369 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 33/172 (19%) Query: 105 PVPRWLSDIPGGMWASEL----WTKHLSHPQSLKILSETFLKT----------NGIDFIP 150 P+ W+ ++P + EL Q L+ L E F +T G + Sbjct: 110 PLLTWIENLPSRIGQVELPPALEGAFAQAAQGLQTLLEGFTQTLLQGLRALLAQGGSLVG 169 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA----YWKKISRI 206 FAS G + + +II+++ Y L + + LF A Y ++ I Sbjct: 170 FFASLVGGVLQLFAA----LIISIYLLY--------DLPQISKTLFQAVPLPYQPFVADI 217 Query: 207 VPKVIRST---FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ R+ G ++AI GL++ +W+ GVP +LG + A+ ++P Sbjct: 218 AAKLDRAVGGYIRGQLLVAISVGLIVTVGFWICGVPLAGSLGFLAAVFNLVP 269 >gi|196044927|ref|ZP_03112161.1| putative membrane protein [Bacillus cereus 03BB108] gi|196024415|gb|EDX63088.1| putative membrane protein [Bacillus cereus 03BB108] Length = 355 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 179 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 238 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK I A I Sbjct: 239 MKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKAGITIA--------ILQ 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 291 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 350 Query: 343 KES 345 K+ Sbjct: 351 KKE 353 >gi|170078569|ref|YP_001735207.1| hypothetical protein SYNPCC7002_A1964 [Synechococcus sp. PCC 7002] gi|169886238|gb|ACA99951.1| Protein of unknown function PF01594 [Synechococcus sp. PCC 7002] Length = 373 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 13/148 (8%) Query: 194 HLFPAYWKK--ISRIVPKVIR--STFLGMTIIAIGEGLVLGSAYWLAGVPS-HVALGVIT 248 LFPA W + + ++ P R S G +++ G+V+ L G+ + LGVI Sbjct: 187 SLFPAPWDEQLLEQVQPMSERMGSYIQGRIVVSGILGIVITIGLRLLGISELALGLGVIA 246 Query: 249 AIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGP 304 A+ +IP P+ + A+ + + G F + L L +E +++D P LVG Sbjct: 247 AVTNLIPFFGPVLGAVPALIVAIAQGGWTFLSVLLLFTLIQNLETYVLD----PLLVGSS 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 +K+ L ++GG + +G+LG I P Sbjct: 303 VKVNPLYQLLAVLGGAQVLGILGAVIVP 330 >gi|116332976|ref|YP_794503.1| permease [Lactobacillus brevis ATCC 367] gi|116098323|gb|ABJ63472.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 390 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 45/218 (20%) Query: 138 ETFLKTNGIDFIPRFASRFGMIFL---DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 T+ G++ + S G + D+ ++II + LFF +DG Sbjct: 157 STYFSKRGLNLLTGTLSSLGNVVTTVSDWIITIITAPLVLFFMLKDGTR----------- 205 Query: 195 LFPAYWKKISRIVPKVIRSTFL---------------GMTIIAIGEGLVLGSAYWLAGVP 239 FP Y IS++VP RS F+ G +A+ ++ + Y + G+ Sbjct: 206 -FPHY---ISQVVPTAYRSRFVVMLDQMNVKVSSYVRGQLTVALCVLIIFTTGYSIIGLR 261 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD----- 293 + +G++ + +IP G+ I+ LI G + + + L G + +++++ Sbjct: 262 YALLIGLLAGPLNLIPYFGSAIALVPA----LIMGVVTSPSMLL--GVVIVYLIEWVLET 315 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + L P ++G + + + F L+ G + GL+G+ G Sbjct: 316 QVLSPLIMGNSLAMHPITIVFVLLAGGKMFGLVGVIFG 353 >gi|229017259|ref|ZP_04174165.1| UPF0118 membrane protein [Bacillus cereus AH1273] gi|229023432|ref|ZP_04179933.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228737880|gb|EEL88375.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228744049|gb|EEL94145.1| UPF0118 membrane protein [Bacillus cereus AH1273] Length = 339 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 7/159 (4%) Query: 198 AYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 AY+ ++ +R KVI + FL IA+ ++ A + G P + L V+ ++ +IP Sbjct: 185 AYFGERFARSFGKVIEAQFL----IAVVNCVLTVIALVILGFPQLLVLAVMVFLLGLIPV 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G IS + I G + + ++ I + L P + LP TF Sbjct: 241 AGVIISLFPLCIIAYNVGGVMYVVYILVFITIIHALESYFLNPKFMSAKTNLPVFYTFMI 300 Query: 316 LVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 L+ +G+ GL IG P+ + L+ V+ + +IK NK Sbjct: 301 LIFSEHFLGIWGLIIGIPIFIFLLDVLDVNNDKSIKSNK 339 >gi|257439067|ref|ZP_05614822.1| conserved hypothetical protein [Faecalibacterium prausnitzii A2-165] gi|257198445|gb|EEU96729.1| conserved hypothetical protein [Faecalibacterium prausnitzii A2-165] Length = 379 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%) Query: 189 DSLGEH---LFPAYWK--------KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +SL H L AY K K R+ + + G A+ G+++ A+ + Sbjct: 194 ESLCHHARTLVCAYLKPSHSAWLLKFCRLFRQSFANFLTGQCSEAVILGVLMALAFSVFK 253 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P +G++TAI A+IP GA IS +L+ + CL ++ A++ FI ++ + Sbjct: 254 IPYGSLVGMLTAICAIIPYVGALISCVVSVFLVLLVDPVLAVRCLIVYLAVQ-FIENQFI 312 Query: 297 RPFLVGGPIKL-PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P +VG + L P ++GG + +F P+ +I ++ +++ I+ + + Sbjct: 313 YPRVVGKSVGLSPLYTLVAAMIGGELFGIIGIIFFIPLTAVIIELVKEDACRRIQARESQ 372 Query: 356 IS 357 S Sbjct: 373 RS 374 >gi|229093461|ref|ZP_04224564.1| hypothetical protein bcere0021_41850 [Bacillus cereus Rock3-42] gi|228689932|gb|EEL43736.1| hypothetical protein bcere0021_41850 [Bacillus cereus Rock3-42] Length = 361 Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 33/183 (18%) Query: 188 LDSLGE--HLF----PAYWKKISRIVPKVIR----STFLGMTIIAIGEGLVLGSAYWLAG 237 L GE H+F P+ W+ +++ K I S G + + G V ++W G Sbjct: 185 LKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIG 244 Query: 238 VPSHVALGVITAIMAMIP------GGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 + + LG+I + +IP G P A VS LLIK + A I Sbjct: 245 MKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKAGVTIA--------ILQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI------W 342 F+ L P++VG +++ + L+ G G++GL I PVL + VI W Sbjct: 297 FVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTVIVHVRPLW 356 Query: 343 KES 345 K+ Sbjct: 357 KKE 359 >gi|330863271|emb|CBX73396.1| putative permease perM [Yersinia enterocolitica W22703] Length = 338 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 44/271 (16%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWP---IYSSFISKKEE 57 R +PQ I +I+ LYF G AP+L+A+++ + WP + S+ Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQRIGCSRPWA 69 Query: 58 SSTFLAVIATVSVMCLFIV-PLLFLFYYGML-EMKELVSKVVLANQHGIPVP-RWLSDIP 114 +S L V ++++ +F+V P ++ +L +M ++++K N +P R+ + + Sbjct: 70 ASIVLVVFGGIALLAVFVVAPTVWQQGNNLLSDMPKMLNKF---NAFAQTLPARYPALVD 126 Query: 115 GG---MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 G M A L +K L + E+ +K + AS G++ L + +I + Sbjct: 127 AGIVDMMAENLRSK-------LSGMGESVVKFS-------LASLIGLLTL--AIYLILVP 170 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFP-------AYWKKISRIVPKVIRSTFLGMTIIAIG 224 + LFF +D +Q+ + + P W ++++ + IR L M ++ + Sbjct: 171 LMLFFLLKD----KEQMLNAVRRILPRNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGVA 226 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 LV +++ G+ + L V+ +IP Sbjct: 227 TYLV----FFVLGMNYALLLAVLVGFSVLIP 253 >gi|317063451|ref|ZP_07927936.1| permease [Fusobacterium ulcerans ATCC 49185] gi|313689127|gb|EFS25962.1| permease [Fusobacterium ulcerans ATCC 49185] Length = 333 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 26/214 (12%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 FI F + F ++ +Y + I I+A+ F G +S L+ L W +I Sbjct: 131 FIGFFLAVFILLDKEYFIRFIKNILAIIFGKEKGMYLSDFLNQSRNVLLNYVWGRI---- 186 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 I S F+G+ + +LAGVP + ++ + MIP I A++I Sbjct: 187 ---IASAFVGVITFVV---------LFLAGVPYALLSSLMIGMGNMIPYVGSIVAGAIAI 234 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI--KLPFLPTFFGLVG---GVRT 322 +L+I LFL I+ +T+ ++VG I + + TF+ +V G Sbjct: 235 FLVILAEPSKIGYLFL-----AMIIGQTVDGWIVGPKIVSETVGMSTFWVIVAVLIGGSV 289 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG +G+F G +I +I++ + I+ I Sbjct: 290 MGPMGMFFGVPAFGIIKLIYETQLKKIENGSTNI 323 >gi|158338720|ref|YP_001519897.1| hypothetical protein AM1_5628 [Acaryochloris marina MBIC11017] gi|158308961|gb|ABW30578.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 385 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 4/171 (2%) Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 LD + ++ II F+ + G + DSL + L + +S + ++ F+G + Sbjct: 172 LDILIDVLVTIILTFYLLQHG---DELWDSLIDWLPEESQQPVSETLRSSFQNYFIGQLL 228 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 I VL + + VP + G+ MA+IP G + V+ + ++ NI+ Sbjct: 229 FGICMTSVLVPTFLILKVPFGLLFGLTIGTMALIPFGGTVGIILVTCLVTLQ-NIWLGLK 287 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 L + I+D + P ++G L F ++ G + GL+G+ I Sbjct: 288 LLAAAVVVQQILDNLVAPRILGTMTGLNPAWVFISILIGAKAGGLIGVVIA 338 >gi|223039328|ref|ZP_03609617.1| acid membrane antigen A [Campylobacter rectus RM3267] gi|222879389|gb|EEF14481.1| acid membrane antigen A [Campylobacter rectus RM3267] Length = 346 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 29/324 (8%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y K F + A ++ + I F+ + T A + T+ + LFI P F Y Sbjct: 20 YLFKPFLLNIFIAALLAVATSNINVKFLQLTKGKKTLSAALTTIVLFSLFIAP----FLY 75 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++E+ A+ + V L G + K + P+ +I+++ +K Sbjct: 76 AVIEIARNA-----ASFNTSYVTNTLDYFQSGNFQLPEPIKFM-EPKIKEIIADIDVKAI 129 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS---LGEHLFPAYWK 201 + I A G +++ + ++F+++ FF G ++ L S + E Sbjct: 130 SANIIANLAG-IGKSSVNFLIDMVFILVFFFFAILYGSELAGYLKSALPMKESESEFILS 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPI 260 ++ ++ V+ S L AI +G + G + +G+I A ++IP G + Sbjct: 189 EVVNVMSVVLYSIVLN----AILQGCLFAIIMISYGYNGFL-MGIIFAFTSLIPVVGGLL 243 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF--------LVGGPIKLPFLP 311 ++ +S+Y GN A + ++ + + IV D L+P LV P K+ L Sbjct: 244 AWGPISLYEFANGNTAAAVVIAVYTVVVISIVADTFLKPIVIKFINDRLVKIPAKINELL 303 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLM 335 FF ++ G+ T G GL +GP ++ Sbjct: 304 IFFSMIAGISTFGFWGLILGPAIV 327 >gi|320546652|ref|ZP_08040964.1| permease [Streptococcus equinus ATCC 9812] gi|320448707|gb|EFW89438.1| permease [Streptococcus equinus ATCC 9812] Length = 371 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 22/231 (9%) Query: 132 SLKILSETF-LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S +IL++ + TN + + AS +F+ + SI + + +Q + Sbjct: 152 SKQILNQVLAVLTNILTSVSTIASTLLNVFISFVFSI--------YVLASKEQLGRQFNL 203 Query: 191 LGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGS----AYWLAGVPSHVA 243 L + Y K + I+ K F+G T+ E ++LGS +L +P Sbjct: 204 LIDSYLGKYAKTVHYVLDILHKRFHGFFVGQTL----EAMILGSLTAIGMFLFKLPYAAT 259 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G++ A A+IP GA I T + L+ ++ A ++ + + P +VG Sbjct: 260 IGILVAFTALIPVVGAYIGVT-IGFILIATQDVSQAIFFVIYLVVLQQFEGNIIYPRVVG 318 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I LP + + G G+LG+ + L A + + K+++ ++N+ Sbjct: 319 GSIGLPGMWVLMAITIGASLWGVLGMLVAVPLAASLYQMIKDNVAKRQKNR 369 >gi|229543555|ref|ZP_04432615.1| sporulation integral membrane protein YtvI [Bacillus coagulans 36D1] gi|229327975|gb|EEN93650.1| sporulation integral membrane protein YtvI [Bacillus coagulans 36D1] Length = 372 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 18/189 (9%) Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG-----MTII 221 +IF ++A FF +D QL G+ L P +K V +R+ G +T+I Sbjct: 179 LIFALLATFFISKDW----NQLTGKGKLLLPKKARKSGITVFADLRNALFGFVRAELTLI 234 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI---FN 277 ++ +VL L V + + ++ I+ ++P G + F IY I G++ Sbjct: 235 SMTLVIVLIGLLILR-VDYAITIALVCGIVDILPYLGTGVVFVPWIIYEFITGSLPLAIG 293 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 T L+ I + + + + P ++ I + L T L G +T+G LGL +GP+ + L Sbjct: 294 LTVLY----IVVIVQRQIMEPKILSSSIGMNPLATLIALFIGFKTVGFLGLILGPITLVL 349 Query: 338 IAVIWKESI 346 + + + + Sbjct: 350 LTALIRAHV 358 >gi|255037065|ref|YP_003087686.1| hypothetical protein Dfer_3310 [Dyadobacter fermentans DSM 18053] gi|254949821|gb|ACT94521.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 354 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 8/143 (5%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + +I+S +G+ + ++ + + V + LGV+ AI+ ++P + TA++ Sbjct: 172 IKSIIQSYMVGLLLETTAVAVLNSAGLLVLNVQYAILLGVMAAILNLVPYIGGLVATALA 231 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIV-----DKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + I + L G + +FIV + L PF+VG +K+ L + G++ G Sbjct: 232 VMVTF---ISHPEIDVLLGVVGIFIVVQIIDNNFLVPFIVGSKVKINALVSIVGVLVGGA 288 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 GL G+F+ +A++ VI+ Sbjct: 289 LAGLSGMFLSIPAIAMMKVIFDR 311 >gi|228994155|ref|ZP_04154055.1| hypothetical protein bpmyx0001_48780 [Bacillus pseudomycoides DSM 12442] gi|229000224|ref|ZP_04159793.1| hypothetical protein bmyco0003_47770 [Bacillus mycoides Rock3-17] gi|229007747|ref|ZP_04165338.1| hypothetical protein bmyco0002_46250 [Bacillus mycoides Rock1-4] gi|228753517|gb|EEM02964.1| hypothetical protein bmyco0002_46250 [Bacillus mycoides Rock1-4] gi|228759556|gb|EEM08533.1| hypothetical protein bmyco0003_47770 [Bacillus mycoides Rock3-17] gi|228765607|gb|EEM14261.1| hypothetical protein bpmyx0001_48780 [Bacillus pseudomycoides DSM 12442] Length = 344 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 6/159 (3%) Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + KK +R KVI + FL IAI ++ A W+ G P + L ++ ++ +IP G Sbjct: 190 FGKKFARSFGKVIEAQFL----IAIVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAG 245 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 IS + + G+I + + A+ + L P + LP TF L Sbjct: 246 VIISLVPLCMIAYNIGSITYVVYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLT 305 Query: 318 GGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 +G+ GL IG P+ + L+ V+ S K++ +K Sbjct: 306 FSEHFLGVWGLIIGIPIFVFLLDVLDVTSDEIEKDSAKK 344 >gi|310644432|ref|YP_003949191.1| hypothetical membrane protein [Paenibacillus polymyxa SC2] gi|309249383|gb|ADO58950.1| Hypothetical membrane protein [Paenibacillus polymyxa SC2] Length = 381 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 82/172 (47%), Gaps = 8/172 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 LF+ +DG + Q + + L P + K+ RI+ ++ + S G I++ G++L Sbjct: 193 LFYLLKDGHKLPQWILKM---LPPMFRKETDRIMTEMNHQVSSYIRGQIIVSFCIGVLLY 249 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + L VI + +++P P I+ T I ++ I + +W ++L Sbjct: 250 IGYLIIGLDYSLTLAVIASFTSVVPYLGPVIAITPALIVAIVTSPIMLLKMVIVWTVVQL 309 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I K + P ++G +++ + F ++ G++G+ + A++ VI Sbjct: 310 -IEGKFISPQIMGKSLRVHPITIIFVILTAGNLFGVVGIVLAVPGYAVLKVI 360 >gi|32475947|ref|NP_868941.1| membrane protein- a permease [Rhodopirellula baltica SH 1] gi|32446490|emb|CAD76326.1| putative membrane protein-putative a permease [Rhodopirellula baltica SH 1] Length = 384 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V + +RS T+I++ G+V G A WL GVP + G++ ++ IP PI Sbjct: 218 VDRQVRSYLFVKTMISLATGIVFGMALWLFGVPMALTFGLLAFLLNYIPNIGPI 271 >gi|209559329|ref|YP_002285801.1| hypothetical protein Spy49_0794 [Streptococcus pyogenes NZ131] gi|209540530|gb|ACI61106.1| Membrane protein, putative [Streptococcus pyogenes NZ131] Length = 393 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 10/221 (4%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+H + N ID+ FA I ++II LF+F RD + Sbjct: 153 LTHTSQKALDYAQSFSKNAIDWAGNFAGAIARI----TVAIIISPFILFYFLRDSSHMKN 208 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ ++ + K + G +AI G + + L G+ + G+ Sbjct: 209 GLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGI 268 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I + MIP G+ ++ V I +++G +F +F+ IE I + + P ++G Sbjct: 269 IAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLFKVLVIFM---IEQTIEGRFVAPLVLGN 325 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + F L+ G+ G+F+ + A + V+ KE Sbjct: 326 KLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKE 366 >gi|194017243|ref|ZP_03055855.1| sporulation integral membrane protein YtvI [Bacillus pumilus ATCC 7061] gi|194011111|gb|EDW20681.1| sporulation integral membrane protein YtvI [Bacillus pumilus ATCC 7061] Length = 372 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 19/210 (9%) Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 TFL + ++ IP F + D +++F +A FF +D F+ L G +FPA Sbjct: 156 TFL-SKTLELIPAFLG----LLPDAAATLLFSALATFFITKDWFT----LKKYGSRIFPA 206 Query: 199 YWKKISRIVPKVIRSTFLG----MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 W + +R + I+ G ++ ++ + V + + + + ++ Sbjct: 207 KWMQHTRAILSEIKKAITGFMKAQLLLVAMTIGLVIIGLIILKVEHALVIALCIGFVDLL 266 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G+ F IY + GN+ A L + I + I + P ++ I L L T Sbjct: 267 PYIGSGTVFLPWIIYSAMTGNLSLAIGLGIL-YIVVLIQRQISEPKVLSKSIGLNPLATL 325 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L G++ +G LGL IGP + V+W+ Sbjct: 326 VALFVGLKWLGFLGLVIGPASL----VVWQ 351 >gi|125717110|ref|YP_001034243.1| permease, putative [Streptococcus sanguinis SK36] gi|322377490|ref|ZP_08051981.1| putative membrane protein [Streptococcus sp. M334] gi|125497027|gb|ABN43693.1| Permease, putative [Streptococcus sanguinis SK36] gi|321281690|gb|EFX58699.1| putative membrane protein [Streptococcus sp. M334] Length = 298 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 9/260 (3%) Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG-IDFIPRFASRFGM 158 +Q G + L+ + + +SE TK + I ++ + I F+ S G Sbjct: 40 SQLGAVLSTVLTQLGKLLDSSEFVTKDMLSTIVSGIQGQSSSISQALITFLSGLTSNIGN 99 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKISRIVPKVIRST 214 IF ++ +I+ F F ++ L + +FP I ++ + Sbjct: 100 IF-SSIMNAFLIIVFTFLFLSSKEHLAAMTSRLLKVIFPEKVVTKLTYIGQVALETYDQF 158 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKG 273 + I A+ G+++ Y L G+P V G+ +++ IP P I+ +I++ Sbjct: 159 LMSQLIEAVIIGVMIAVGYSLFGLPYGVMTGIFAGVLSFIPYVGPMIACVVGAIFIFTVS 218 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 L L+ I+L I + P +VG I LP + T G GLLG+ Sbjct: 219 PTQALLSLLLYQVIQL-IEGNLIYPRVVGQSIGLPAIFTLAAASIGGNLFGLLGMIFFTP 277 Query: 334 LMALIAVIWKESIMAIKENK 353 + A+I + KE ++A KEN+ Sbjct: 278 IFAVIYRLVKEFVVA-KENQ 296 >gi|308071200|ref|YP_003872805.1| hypothetical protein PPE_04507 [Paenibacillus polymyxa E681] gi|305860479|gb|ADM72267.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 387 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 8/162 (4%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLG 230 LF+ +DG + Q + + L P + K+ +RI+ ++ + S G I++ G +L Sbjct: 193 LFYLLKDGHKLPQFILKM---LPPMFRKETNRIMNEMNHQVSSYIRGQIIVSFCIGALLY 249 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + L VI + +++P P I+ T I L+ I + +W ++L Sbjct: 250 IGYLIIGLDYSLTLAVIASFTSVVPYLGPVIAITPALIVALVTSPIMLLKMVIVWTVVQL 309 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 I K + P ++G +++ + F ++ G++G+ + Sbjct: 310 -IEGKFISPQIMGKSLRVHPITIIFVILTAGNLFGVVGIVLA 350 >gi|302392357|ref|YP_003828177.1| sporulation integral membrane protein YtvI [Acetohalobium arabaticum DSM 5501] gi|302204434|gb|ADL13112.1| sporulation integral membrane protein YtvI [Acetohalobium arabaticum DSM 5501] Length = 352 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%) Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG-----------MT 219 +I+ FF RD I+Q + FP W K + I S +G T Sbjct: 171 LISTFFISRDKELINQTI----LRAFPRPWHKNINKLESEIMSAAIGFIRAELILISITT 226 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 ++ I L+LGS Y ++LG++ ++ +IP G + + Y +I G+I Sbjct: 227 VLMITGLLLLGSDY-------AISLGLVAGLLDLIPVIGPSLVILPWAGYSMIIGDISFG 279 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L I + ++ + + ++G I + L T + GV+ +G+ G FIGP ++ L+ Sbjct: 280 VSL-LAVLITVAVIRQLVEAKVIGENIGIHPLATLISMYLGVQILGIGGFFIGPAILILL 338 Query: 339 AVIWK 343 I + Sbjct: 339 RAIIR 343 Searching..................................................done Results from round 2 >gi|254780223|ref|YP_003064636.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] gi|254039900|gb|ACT56696.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] Length = 360 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 360/360 (100%), Positives = 360/360 (100%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST Sbjct: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS Sbjct: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD Sbjct: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS Sbjct: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL Sbjct: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF Sbjct: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 >gi|195970204|ref|NP_384592.2| ABC transporter permease [Sinorhizobium meliloti 1021] gi|187904139|emb|CAC41923.2| Probable permease [Sinorhizobium meliloti 1021] Length = 436 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 177/356 (49%), Positives = 232/356 (65%), Gaps = 2/356 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 70 RSALVVPISAARWLLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTL 129 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA +SV+ +VP+ Y + E+++ + V N +G P P WL+ IP G W Sbjct: 130 AATIAIISVVAFIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLG 189 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ HP +L L + +N + I R G L+++FM+I LFF YRD Sbjct: 190 EQWVKYVGHPGALGELVQLVSGSNIGN-IYRGVLVVGASAFQSFLTLLFMLITLFFVYRD 248 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 249 GQSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 308 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG++T IMA+IPGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP L Sbjct: 309 PVTLGILTGIMALIPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRL 368 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 VGGPIKLPFLPTFFGL+GGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 369 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPP 424 >gi|260466876|ref|ZP_05813060.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259029378|gb|EEW30670.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 413 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 172/360 (47%), Positives = 231/360 (64%), Gaps = 2/360 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y ++ + T Sbjct: 31 LRSAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYRRLLASVGGNRT 90 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A A + ++ ++P+ Y + E++E V + N+HG P W++ +P G W Sbjct: 91 IAATFAILFILAFLVIPIALAGTYAINEVREWVGWAIETNRHGATTPHWIATLPVIGEWL 150 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E WT + HP + L + + I I R G L+++FM+IALFF YR Sbjct: 151 NEQWTDNFGHPGGIGELIQ-LISGANIGSIYRGVLAAGGSAFGLLLTLLFMMIALFFAYR 209 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVP Sbjct: 210 DGEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVP 269 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP Sbjct: 270 SPVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPK 329 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ E + + Sbjct: 330 LVGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVELADETAADS 389 >gi|315122337|ref|YP_004062826.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495739|gb|ADR52338.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 361 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 258/353 (73%), Positives = 293/353 (83%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRE +LNPQ IMRW I+FI+L +YFLKGFFAPVL+ALIIGF SWPIYS FISK+E+S T Sbjct: 1 MREIILNPQRIMRWTIIFIVLACIYFLKGFFAPVLTALIIGFASWPIYSLFISKEEKSFT 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A IAT++V+ LFI+PLLF YY LE+K L S V L N+ GIP P WLS IPGG + Sbjct: 61 LEATIATLTVILLFIIPLLFFSYYTTLEIKNLASYVALVNEKGIPKPSWLSHIPGGGVWA 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 LWTK+LS PQSL L+E L TNG F +F S F DY LSIIFM+IALFFFYRD Sbjct: 121 GLWTKYLSPPQSLMTLTENILTTNGTQFTLKFVSYFSNCIFDYLLSIIFMLIALFFFYRD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S+S QLDSLG +L P YW+KISRI+P+VIRSTF+GMT+IAIGEGLVLGSAYW+AGVPS Sbjct: 181 GLSMSLQLDSLGGYLLPVYWEKISRIIPRVIRSTFVGMTVIAIGEGLVLGSAYWIAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ALGVITAIMAMIPGGAP+SFT VSIYL+IKG+I NA LF WGAIELFIVDKTLRPFL Sbjct: 241 YTALGVITAIMAMIPGGAPVSFTVVSIYLVIKGSITNAILLFSWGAIELFIVDKTLRPFL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VGGPI+LPFLPTFFGLVGGVRTMGLLGLFIGPV+MAL+ VIWKESI+AI+EN Sbjct: 301 VGGPIRLPFLPTFFGLVGGVRTMGLLGLFIGPVIMALMTVIWKESILAIRENN 353 >gi|13476905|ref|NP_108474.1| hypothetical protein mlr8361 [Mesorhizobium loti MAFF303099] gi|14027666|dbj|BAB53935.1| mlr8361 [Mesorhizobium loti MAFF303099] Length = 411 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 230/351 (65%), Gaps = 2/351 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y ++ + T Sbjct: 29 LRSAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYQRLLAGVGGNRT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A +A + ++ ++P+ Y + E++E V + N+HG P W++ +P G W Sbjct: 89 IAATLAILFILAFLVIPIALAGTYAINEVREWVGWAIETNRHGAVTPHWIATMPVVGDWL 148 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E WT + HP + L + + I I R A G L+++FM+IALFF YR Sbjct: 149 NEQWTTNFGHPGGIGELIQ-LISGANIGSIYRGALAAGGSAFGLLLTLLFMMIALFFAYR 207 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVP Sbjct: 208 DGEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVP 267 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP Sbjct: 268 SPVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPK 327 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LVGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 328 LVGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVE 378 >gi|227820705|ref|YP_002824675.1| predicted transmembrane protein [Sinorhizobium fredii NGR234] gi|227339704|gb|ACP23922.1| predicted transmembrane protein [Sinorhizobium fredii NGR234] Length = 391 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 181/357 (50%), Positives = 235/357 (65%), Gaps = 2/357 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RWM++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVLPISAARWMLVLILLAGVYFFHGFVVPVLAAVVIGFASWPIYRRLLQALNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA +SV+ +VP+ Y + E+++ + V N +G PVP WL+ IP G W Sbjct: 85 AATIAIISVIAFIVVPISIAAAYAIDEVRDWLVWAVETNVNGAPVPAWLTTIPVAGAWLG 144 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + W K++ HP +L L + +N + I R G L+++FM+I LFF YRD Sbjct: 145 QQWVKYVGHPGALGELVQLVSGSNIGN-IYRGVLVIGASAFQSFLTLLFMLITLFFVYRD 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 204 GHSFSKQLDRLGEQIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG+IT +MA+IPGGAP+ FT VSIYL+ G+ F+ LF WG ELFIVDKTLRP L Sbjct: 264 PVTLGIITGLMALIPGGAPLCFTLVSIYLVASGSPFHGVALFAWGTTELFIVDKTLRPRL 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 VGGPIKLPFLPTFFGLVGGV+TMG LGLF+GPVLMAL+ IW+E + + E + Sbjct: 324 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWMHEVANQPEPTA 380 >gi|325293121|ref|YP_004278985.1| permease [Agrobacterium sp. H13-3] gi|325060974|gb|ADY64665.1| permease [Agrobacterium sp. H13-3] Length = 412 Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ + L +YF GF PVL+AL+IGF SWP+Y+ + + ++T Sbjct: 23 RIALIPPISAARWLLVLVALAGIYFFHGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTL 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ +VP+ Y E++E V N+ G PVP W++ +PG G W Sbjct: 83 GASIAIILILTFLVVPIFIAASYTASEIREWFGWAVHVNKVGAPVPDWIAALPGVGSWLG 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ P ++ + + N + I R G L+++FM+IALFF YR+ Sbjct: 143 EQWVKYIGTPGAIGEVIQLVSGANIGN-IYRAILAAGNGAFHLVLTLLFMLIALFFVYRN 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S Q+D +GE + P W++ISR+VP I ST GMT+IAIGEG++LG AYW+AGVPS Sbjct: 202 GAGFSHQVDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYL+ G+ LF+WG++ELFIVDKT+RP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLVASGSPAYGLGLFIWGSVELFIVDKTIRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWREWVREVE 371 >gi|319784191|ref|YP_004143667.1| hypothetical protein Mesci_4507 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170079|gb|ADV13617.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 401 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 172/359 (47%), Positives = 231/359 (64%), Gaps = 2/359 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y + + T Sbjct: 22 LRAAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYRRLLVAVGGNRT 81 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A A + ++ ++P+ Y + E++E V+ + N+HG P W++ +P G W Sbjct: 82 IAATFAILFILAFLVIPIALAGTYAINEVREWVAWAIETNRHGAVTPHWIATMPVVGEWL 141 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E WT + HP + L + N I I R G L+++FM+IALFF YR Sbjct: 142 NEQWTTNFGHPGGIGELIQLVSGAN-IGSIYRGVLAAGGSAFGLLLTLLFMMIALFFAYR 200 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVP Sbjct: 201 DGEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVP 260 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP Sbjct: 261 SPVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPK 320 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LVGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ ++ + Sbjct: 321 LVGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVEMAEDVVPD 379 >gi|307306991|ref|ZP_07586730.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307318057|ref|ZP_07597494.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306896459|gb|EFN27208.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306901931|gb|EFN32530.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 391 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 177/356 (49%), Positives = 232/356 (65%), Gaps = 2/356 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVVPISAARWLLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA +SV+ +VP+ Y + E+++ + V N +G P P WL+ IP G W Sbjct: 85 AATIAIISVVAFIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLG 144 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ HP +L L + +N + I R G L+++FM+I LFF YRD Sbjct: 145 EQWVKYVGHPGALGELVQLVSGSNIGN-IYRGVLVVGASAFQSFLTLLFMLITLFFVYRD 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 204 GQSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG++T IMA+IPGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP L Sbjct: 264 PVTLGILTGIMALIPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRL 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 VGGPIKLPFLPTFFGL+GGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 324 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPP 379 >gi|150395339|ref|YP_001325806.1| hypothetical protein Smed_0111 [Sinorhizobium medicae WSM419] gi|150026854|gb|ABR58971.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 391 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 175/359 (48%), Positives = 230/359 (64%), Gaps = 2/359 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ ++L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAAVVIGFASWPIYWRMLQALNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA + V+ +VP+ Y + E++ + V N +G P P WL+ IP G W Sbjct: 85 AATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAVETNANGAPAPAWLATIPAVGAWLG 144 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ HP +L L + +N + I R G L+++FM+I LFF YRD Sbjct: 145 EQWVKNVGHPGALGELVQLVSGSNIGN-IYRGVLVVGASAFQSFLTLLFMLITLFFVYRD 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 204 GHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG+IT +MA++PGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP L Sbjct: 264 PVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIHGIALFTWGTTELFIVDKTLRPRL 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 VGGPIKLPFLPTFFGLVGGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 324 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPADDK 382 >gi|221641060|ref|YP_002527322.1| hypothetical protein RSKD131_2961 [Rhodobacter sphaeroides KD131] gi|221161841|gb|ACM02821.1| Hypothetical Protein RSKD131_2961 [Rhodobacter sphaeroides KD131] Length = 424 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 152/351 (43%), Positives = 212/351 (60%), Gaps = 2/351 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ RW+++ I+ S+YF GF PVL+ALII F SWP+ S Sbjct: 35 VRRPLITDISAARWLLLLILAASVYFFHGFLVPVLAALIIAFASWPLMLKLERSLPISRG 94 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 + + ++ ++P++ Y E++ + + N G P P WL +P G W Sbjct: 95 IAGALLVMMIVGFLVIPVMMALLYAFRELQAWIGWAINTNSTGAPPPVWLEALPHVGPWV 154 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W ++ P ++ + + N I I R G + L+++FM+IALF FYR Sbjct: 155 GEKWRTYIGEPGAISEMVQLVSGAN-IGTISRGILTAGTLAFHLALTLLFMLIALFIFYR 213 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+P Sbjct: 214 DGERIAAQVDRVGTRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMP 273 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGVIT MA+IPGGAP S YL G+ + LFLWG +ELF+VDKT+RP Sbjct: 274 SPVTLGVITGFMALIPGGAPFCVIVASSYLAASGSPWAGLGLFLWGTVELFVVDKTIRPV 333 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LVGGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E I Sbjct: 334 LVGGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVAMWREWQREID 384 >gi|86357805|ref|YP_469697.1| putative permease protein [Rhizobium etli CFN 42] gi|86281907|gb|ABC90970.1| putative permease protein [Rhizobium etli CFN 42] Length = 398 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 173/353 (49%), Positives = 235/353 (66%), Gaps = 2/353 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +S+ ++T Sbjct: 21 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLSRVGGNTTI 80 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA V ++ ++P+ Y E++ V+ + AN+ G P W+ +P G + Sbjct: 81 AATIAIVMIVTFLVIPIGLAVTYTTGEVRNWVTWAIHANRTGAATPDWIVALPWAGAYLD 140 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++WTK++ P +L L + N + I R G L+++FM+IALFF YRD Sbjct: 141 DVWTKYIGSPGALGELIQAVSGANIGN-IYRALLAAGGGAFHLLLTLLFMLIALFFVYRD 199 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 200 GFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGVAYWIAGVPS 259 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VS+YLL G+ LF+WG +ELFIVDKTLRP L Sbjct: 260 PVTLGVLTGVMALIPGGAPLSFTLVSVYLLASGSHAAGIALFVWGTVELFIVDKTLRPKL 319 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMALI IW+E I + + Sbjct: 320 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAE 372 >gi|146279074|ref|YP_001169233.1| hypothetical protein Rsph17025_3044 [Rhodobacter sphaeroides ATCC 17025] gi|145557315|gb|ABP71928.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 398 Score = 265 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 152/350 (43%), Positives = 212/350 (60%), Gaps = 2/350 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ RW+++ I+ S+YF GF PVL+A+II F SWP+ Sbjct: 20 RKPLITDISAARWLLLLILAASVYFFHGFLVPVLAAVIIAFASWPLLQRLERSLPIGRAG 79 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 + + ++ ++P++ Y E++ + + N G P P WL +P G W Sbjct: 80 AGALLLMMIVGFLVIPVMMALLYAFRELQSWIGWAINTNSLGAPPPVWLETLPHVGPWIG 139 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W ++ P ++ + + N I I R G + L+++FM+IALF FYRD Sbjct: 140 EKWRAYIGEPGAISEMVQLVSGAN-IGTISRGILTAGTLAFHLALTLLFMLIALFIFYRD 198 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+PS Sbjct: 199 GERIAAQVDRVGSRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMPS 258 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGVIT MA++PGGAP A S YL G+ + LFLWG IELFIVDKT+RP L Sbjct: 259 PVTLGVITGFMALVPGGAPFCVVAASSYLAASGSPWAGLGLFLWGTIELFIVDKTIRPVL 318 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VGGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E I Sbjct: 319 VGGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVSMWREWQREID 368 >gi|119386380|ref|YP_917435.1| hypothetical protein Pden_3672 [Paracoccus denitrificans PD1222] gi|119376975|gb|ABL71739.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 396 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 157/360 (43%), Positives = 222/360 (61%), Gaps = 2/360 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +L RW+++ I+ S+YF GF PVL+A++I SWP+ + T+ Sbjct: 34 RPPLLTNISAARWLLLAIVAASIYFFHGFLVPVLAAMVIALASWPLRERAAHQLNLGRTW 93 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A + ++C ++P+ Y E+++ ++ +L N G P W+ D+P G W Sbjct: 94 AAAALVLVLVCFLLIPIAMALIYAFRELRDWINWAILVNSSGAATPGWMVDLPQIGDWLD 153 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W ++ P + + + +N I I R A G + L+++FM+I LF YRD Sbjct: 154 ENWQTYIGRPGGISEIVQLVSGSN-IGAIYRGAVTAGTLAFHLALTLLFMLITLFVLYRD 212 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I Q+D +G + P W ++SR+VP I ST GMT+IAIGEG++LG AYWLAGVPS Sbjct: 213 GDKIVAQIDQVGRRILPDRWSRLSRVVPATISSTVTGMTLIAIGEGVILGIAYWLAGVPS 272 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V GVIT MA+IPGGAP+SFT VSIYL+ G+ LF+WG ELF+VDKT+RP L Sbjct: 273 PVTFGVITGFMALIPGGAPLSFTLVSIYLVASGSPVAGAALFVWGTCELFVVDKTIRPVL 332 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 VGGP+KLPFLPTFFGL+GGV+TMG++GLF+GPVLMAL+ IW+E + E +++ S Sbjct: 333 VGGPVKLPFLPTFFGLIGGVKTMGIVGLFVGPVLMALLVSIWREWQRELSEEEQRQDSKL 392 >gi|218672333|ref|ZP_03522002.1| putative permease protein [Rhizobium etli GR56] Length = 413 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 236/351 (67%), Gaps = 2/351 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 21 RTPLIPSISAARWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 80 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA + ++ ++P+ F Y E++ ++ + AN+ G P W++ +P G + Sbjct: 81 AATIAIIMIVTFLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLD 140 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ELWTK++ P +L L + + + I R G L+++FM+IALFF YRD Sbjct: 141 ELWTKYIGSPGALGELIQAVSGAHIGN-IYRAVLAAGGGAFHLLLTLLFMLIALFFVYRD 199 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 200 GFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPS 259 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP L Sbjct: 260 PVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGVGLFVWGTVELFIVDKTLRPKL 319 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 320 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARN 370 >gi|77462103|ref|YP_351607.1| putative transmembrane transport protein [Rhodobacter sphaeroides 2.4.1] gi|126460992|ref|YP_001042106.1| hypothetical protein Rsph17029_0215 [Rhodobacter sphaeroides ATCC 17029] gi|77386521|gb|ABA77706.1| Putative transmembrane transport protein [Rhodobacter sphaeroides 2.4.1] gi|126102656|gb|ABN75334.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 406 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 152/351 (43%), Positives = 212/351 (60%), Gaps = 2/351 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ RW+++ I+ S+YF GF PVL+ALII F SWP+ S Sbjct: 27 VRRPLITDISAARWLLLLILAASVYFFHGFLVPVLAALIIAFASWPLMLKLERSLPISRG 86 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 + + ++ ++P++ Y E++ + + N G P P WL +P G W Sbjct: 87 IAGALLVMMIVGFLVIPVMMALLYAFRELQAWIGWAINTNSTGAPPPVWLEALPHVGPWV 146 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W ++ P ++ + + N I I R G + L+++FM+IALF FYR Sbjct: 147 GEKWRTYIGEPGAISEMVQLVSGAN-IGTISRGILTAGTLAFHLALTLLFMLIALFIFYR 205 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+P Sbjct: 206 DGERIAAQVDRVGTRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMP 265 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGVIT MA+IPGGAP S YL G+ + LFLWG +ELF+VDKT+RP Sbjct: 266 SPVTLGVITGFMALIPGGAPFCVIVASSYLAASGSPWAGLGLFLWGTVELFVVDKTIRPV 325 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LVGGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E I Sbjct: 326 LVGGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVAMWREWQREID 376 >gi|163858826|ref|YP_001633124.1| hypothetical protein Bpet4506 [Bordetella petrii DSM 12804] gi|163262554|emb|CAP44857.1| conserved hypothetical protein [Bordetella petrii] Length = 389 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 163/360 (45%), Positives = 228/360 (63%), Gaps = 2/360 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +L I RW+++ ++L YFL GF P L+ALIIG +WP++ + K +T Sbjct: 21 MHQPVLPAYLIARWLLLLVLLAGAYFLSGFLVPALAALIIGLATWPLFQRIVQKCGGRAT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A +A + V+ + IVPL Y + E + + AN+HG+ VP W+S +P G Sbjct: 81 LAATLALIGVILVIIVPLALALSYAVQEASNFFAWALAANRHGMAVPDWISSLPAVGPRL 140 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W +L P +L L E + + I R L+++FM+I LFF Y+ Sbjct: 141 AVYWQTYLGEPHALGALVELVSGEHLGN-IYRMVLSATGNAFQLLLNVVFMLITLFFVYK 199 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + QLD LGE + P W++ SR+VP + ST GM++IA+GEG+VLG AYWLAGVP Sbjct: 200 DGDRMIAQLDVLGERILPTRWQRFSRVVPATVGSTVTGMSLIAVGEGVVLGVAYWLAGVP 259 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGV+T MA+IPGGAP+SFT VS+YL+ G++ L WG IELFIVDKTLRP Sbjct: 260 SPVLLGVVTGFMALIPGGAPLSFTLVSLYLIGSGHLVAGLALLAWGTIELFIVDKTLRPR 319 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVGGP+KLPFLPTFFGL+GGV+TMG++GLF+GPVLMAL+ +W+E + ++ ++ N Sbjct: 320 LVGGPVKLPFLPTFFGLIGGVKTMGIVGLFVGPVLMALLVAVWREWVRNVERERDTARLN 379 >gi|159184894|ref|NP_354723.2| permease [Agrobacterium tumefaciens str. C58] gi|159140174|gb|AAK87508.2| permease [Agrobacterium tumefaciens str. C58] Length = 412 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 168/350 (48%), Positives = 236/350 (67%), Gaps = 2/350 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ ++L +YF GF PVL+AL+IGF SWP+Y+ + + ++T Sbjct: 23 RIALIPPISAARWLLLLVVLAGIYFFNGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTL 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ +VP+ Y E++E V N+ G PVP W++ +PG G W Sbjct: 83 GATIAIILIIAFLVVPIFIAASYTATEIREWFGWAVHVNKAGAPVPDWIAALPGIGPWLG 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W K++ P ++ + + N + I R G L+++FM+IALFF YR+ Sbjct: 143 EQWVKYIGTPGAIGEVIQLVSGANIGN-IYRAILAAGNGAFHLVLTLLFMLIALFFVYRN 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q+D +GE + P W++ISR+VP I ST GMT+IAIGEG++LG AYW+AGVPS Sbjct: 202 GAGFTRQIDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYL+ G+ + LF+WG++ELFIVDKT+RP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLVASGSPAHGLALFVWGSVELFIVDKTIRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWREWVREVE 371 >gi|241204758|ref|YP_002975854.1| hypothetical protein Rleg_2037 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858648|gb|ACS56315.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 405 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 236/351 (67%), Gaps = 2/351 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ ++P+ Y E++ V+ + AN+ G P P W+ +P G + + Sbjct: 83 AATIAIIMIITFLVIPIGLAVTYTTGEVRTWVTWAIHANRVGAPTPDWIVALPWAGAYLN 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+WT+++ P +L + + N + I R G L+++FM+IALFF YRD Sbjct: 143 EVWTRYIGSPGALGEVIQAVSGANIGN-IYRAVLAAGGGAFHLLLTLLFMLIALFFVYRD 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 202 GFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARN 372 >gi|116252266|ref|YP_768104.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256914|emb|CAK08008.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 405 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 235/351 (66%), Gaps = 2/351 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ ++P+ Y E++ V+ + AN+ G P P W+ +P G + Sbjct: 83 AATIAIILIITFLVIPIGLAVTYTTGEVRTWVAWAIHANRAGAPTPDWIVALPWAGAYLD 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+WTK++ P +L + + N + I R G L+++FM+IALFF YRD Sbjct: 143 EVWTKYIGSPGALGEVIQAVSGANIGN-IYRAVLAAGGGAFHLLLTLLFMLIALFFVYRD 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 202 GFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGISLFVWGTVELFIVDKTLRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARN 372 >gi|190891868|ref|YP_001978410.1| putative permease protein [Rhizobium etli CIAT 652] gi|190697147|gb|ACE91232.1| putative permease protein [Rhizobium etli CIAT 652] Length = 398 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 176/353 (49%), Positives = 237/353 (67%), Gaps = 2/353 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 21 RTPLIPSISAARWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 80 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA + ++ ++P+ F Y E++ ++ + AN+ G P W++ +P G + Sbjct: 81 AATIAIIMIVTFLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLD 140 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ELWTK++ P +L L + + + I R G L+++FM+IALFF YRD Sbjct: 141 ELWTKYIGSPGALGELIQAVSGAHIGN-IYRAVLAAGGGAFHLLLTLLFMLIALFFVYRD 199 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFS S+QLD LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 200 GFSFSKQLDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPS 259 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP L Sbjct: 260 PVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGVGLFVWGTVELFIVDKTLRPKL 319 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + + Sbjct: 320 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAE 372 >gi|187476842|ref|YP_784866.1| membrane protein [Bordetella avium 197N] gi|115421428|emb|CAJ47933.1| putative membrane protein [Bordetella avium 197N] Length = 369 Score = 257 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 166/355 (46%), Positives = 230/355 (64%), Gaps = 2/355 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ + I RW+++ ++ LYFL GF P L+ALIIG +WP+Y + + + Sbjct: 1 MQQPVFPVYLIARWLLLLVVAAGLYFLSGFLVPALAALIIGLATWPLYERVVRFCKGRNI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A +A V+ + +VPL Y E + + AN+HG+ VP W+S +PG G Sbjct: 61 LAATLALCIVVLVVVVPLSMALTYAFKEASNFFAWALAANKHGVEVPFWISSLPGVGERL 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S+ WT +L P +L + E + + I R A + L+++FM+I LFF Y+ Sbjct: 121 SQYWTTYLGEPHALGAMVELVSGEHLGN-IYRMALSATGNVFQWLLTLLFMLITLFFVYK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG S+ QLD LGE + PA WK+ SR+VP + ST GM +IA+GEG+VLG AYW+AGVP Sbjct: 180 DGKSMVAQLDILGERVLPARWKRFSRVVPATVSSTVTGMCLIALGEGVVLGLAYWIAGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGVIT MA+IPGGAP+SFT VS+YL+ ++ LF+WG +ELFIVDKTLRP Sbjct: 240 SPVLLGVITGFMALIPGGAPLSFTLVSLYLVGSNHLVAGVGLFVWGTVELFIVDKTLRPR 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LVGGP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ IW+E + + + + Sbjct: 300 LVGGPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAIWREWVRNTERDCD 354 >gi|119896356|ref|YP_931569.1| permease [Azoarcus sp. BH72] gi|119668769|emb|CAL92682.1| probable permease [Azoarcus sp. BH72] Length = 367 Score = 257 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 227/343 (66%), Gaps = 2/343 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW++ ++L +YFL GF PVL+ALIIGF SWP+Y + + S A +A ++V Sbjct: 10 VARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAVAASLALMTV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + + +VPL Y M E L+ ++ AN++G+ PRW+ +P G + LW ++L Sbjct: 70 ILVLVVPLSLAGSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLAALWQEYLGA 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 PQ+L + L + I R L L+++FM+I LFF Y+DG I+ QLD Sbjct: 130 PQALGEWVQ-ILSGQHLGNIYRILLAATGDLLHAVLTLLFMLITLFFIYKDGDRIAAQLD 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +GE + PA W++ SR+VP + +T GM +IAIGEG+VLG AYW+AGVPS V LGV TA Sbjct: 189 RVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSPVLLGVATA 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 MA+IPGGAP++FT VS+YL+ G+ LF WG ELFIVDKTLRP LVGGP+KLPF Sbjct: 249 FMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLVGGPVKLPF 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LPTFFGLVGGV+TMGL+GLF+GPVLMAL+ IW+E + +E Sbjct: 309 LPTFFGLVGGVKTMGLVGLFVGPVLMALLVAIWREWLHHTEEE 351 >gi|222086043|ref|YP_002544575.1| permease protein [Agrobacterium radiobacter K84] gi|221723491|gb|ACM26647.1| permease protein [Agrobacterium radiobacter K84] Length = 392 Score = 255 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 165/359 (45%), Positives = 233/359 (64%), Gaps = 2/359 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I +YF GF PVL+A +IGF +WP+YS + + ++T Sbjct: 22 RMALIPSISAARWLLILIAAAGIYFFYGFLIPVLAAAVIGFATWPLYSDLLRRTGGNTTL 81 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA ++ ++P++ Y E++E V N+ G P P+W+ +P G W Sbjct: 82 AAAIAIAFIVTFLVLPIVLSAIYMAGEVREWFGWAVHVNRDGAPPPQWILALPMVGAWLG 141 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + WT+++ P S+ L++ + I I R G L+++FM+IALFF YRD Sbjct: 142 DQWTQYIGSPGSIGELAQ-LISGAHIGNIYRAVLAAGGGAFHVILTLLFMLIALFFIYRD 200 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AG PS Sbjct: 201 GSMFVRQVDLLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGVAYWIAGAPS 260 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LGV+T +MA++PGGAP+S + VSIYL+ G+++ LF+WG +ELFIVDKTLRP L Sbjct: 261 AITLGVLTGVMALVPGGAPLSMSLVSIYLIASGSLWAGIALFVWGTVELFIVDKTLRPKL 320 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMA+I IW+E I + +E+ + Sbjct: 321 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMAIIVAIWREWIREAELTEEQHAQE 379 >gi|310815151|ref|YP_003963115.1| hypothetical protein EIO_0655 [Ketogulonicigenium vulgare Y25] gi|308753886|gb|ADO41815.1| putative membrane protein [Ketogulonicigenium vulgare Y25] Length = 390 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 142/358 (39%), Positives = 223/358 (62%), Gaps = 4/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ Q +RW+++ ++ S+YF GF PVL+A++I F SWPI + +T+ Sbjct: 32 RKPVITDQAAVRWLLLVLLAASVYFFYGFIVPVLAAMVIAFASWPIRQRLVPHMG--TTW 89 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A++ ++++ ++P+L Y + E++ ++ N G P P W+ ++P G Sbjct: 90 AAIVMVLALVVCIVLPILMGVLYAIHEVRGWSMWLMEVNTTGAPTPEWMQELPFFGAQID 149 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + L P + L + +N ++ I R G L+++F+++ALF FY D Sbjct: 150 ERWAEFLGRPGGVSALIQLVTGSNIMN-IYRGVLSAGYYSFHLFLNLVFVLVALFVFYHD 208 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I Q+ +G L P W ++S + P + ST GMT+IAIGEG++LG AYW+AGVP+ Sbjct: 209 GDKIVAQIGRVGRRLLPERWDRLSSVAPMTVSSTVTGMTLIAIGEGIILGLAYWVAGVPA 268 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+IT +A+IPGGAP++FT +S+YL+ G+ LF+WG +ELFIVDKT+RP+L Sbjct: 269 PATFGLITGFLALIPGGAPLAFTTISLYLVASGSPIAGVGLFVWGTVELFIVDKTIRPWL 328 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 VGGP++LPFL TFFGL+GG++TMG++GLF+GPVLMAL+ IW+E I+ E+ Sbjct: 329 VGGPVRLPFLLTFFGLIGGIKTMGIVGLFVGPVLMALLMTIWREWQREIRAPYERAED 386 >gi|209549432|ref|YP_002281349.1| hypothetical protein Rleg2_1838 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535188|gb|ACI55123.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 398 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 174/354 (49%), Positives = 237/354 (66%), Gaps = 2/354 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 A IA + ++ ++P+ Y E++ V+ + AN+ G P P W+ +P G + Sbjct: 83 AATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHANRAGAPTPAWIVALPWAGAYLD 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+WTK++ P +L + + N + I R G L+++FM+IALFF YRD Sbjct: 143 EVWTKYIGSPGALGEVIQAVSGANIGN-IYRAVLAAGGGAFHLLLTLLFMLIALFFVYRD 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 202 GFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP L Sbjct: 262 PVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 VGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + ++ Sbjct: 322 VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAEK 375 >gi|33594470|ref|NP_882114.1| hypothetical protein BP3604 [Bordetella pertussis Tohama I] gi|33595146|ref|NP_882789.1| hypothetical protein BPP0437 [Bordetella parapertussis 12822] gi|33599428|ref|NP_886988.1| hypothetical protein BB0439 [Bordetella bronchiseptica RB50] gi|33564545|emb|CAE43862.1| putative membrane protein [Bordetella pertussis Tohama I] gi|33565223|emb|CAE36021.1| putative membrane protein [Bordetella parapertussis] gi|33567024|emb|CAE30937.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 367 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 163/356 (45%), Positives = 231/356 (64%), Gaps = 2/356 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +L I RW+++ ++L +YFL GF P L+ALIIG +WP++ + +T Sbjct: 1 MHQPVLPAFLIARWLLLLVLLAGIYFLSGFLVPALAALIIGLATWPLFQRLVRAFGGRTT 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A +A V+V+ + +VPL Y + E + + AN+HG+ VP W+ +P G Sbjct: 61 LAATLALVAVIVILVVPLSLALSYAIKEAGNFFAWALAANKHGVDVPAWIMSLPMVGERL 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E W +L P +L L E + + I R L+++FM+I LFF Y+ Sbjct: 121 AEYWRTYLGEPHALGALVEIVSGEHLGN-IYRMVLSATGNAFQLLLTVLFMLITLFFVYK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + QLD LGE + PA W++ SR+VP + ST GM +IA+GEG+VLG AYW+AGVP Sbjct: 180 DGTRMVGQLDILGERVLPARWQRFSRVVPATVSSTVTGMCLIALGEGVVLGLAYWVAGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V LGVIT MA++PGGAP+SFT VS+YL+ G++ LF+WG +ELFIVDKTLRP Sbjct: 240 SPVLLGVITGFMALVPGGAPLSFTLVSLYLVGSGHLVAGIGLFVWGTVELFIVDKTLRPR 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LVGGP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ IW+E + ++ +++ Sbjct: 300 LVGGPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAIWREWVRNVERERDQ 355 >gi|293602078|ref|ZP_06684532.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292819533|gb|EFF78560.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 374 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 162/358 (45%), Positives = 229/358 (63%), Gaps = 2/358 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +L I RW+++ ++L +YFL GF P L+ALIIG SWP+Y + + + Sbjct: 2 QPVLPAYLIARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVVRCGGRTAVA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 A +A + V+ + IVP+ Y + E + + AN+HG+ VP W++ +P G + Sbjct: 62 ASLALLMVIVVLIVPMSLALSYAIKEASTFFAWAIAANRHGVAVPNWITSMPVVGERLGQ 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W ++ P +L L E + + I R L+++FM+I LFF Y+DG Sbjct: 122 YWESYIGEPHALGALVEAVSGEHLGN-IYRMVLAATGNVFQLLLTVLFMLITLFFVYKDG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + QLD LGE + PA W++ SR+VP I ST GM +IA+GEGLVLG AYW+AGVPS Sbjct: 181 IRMVAQLDVLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGLVLGVAYWVAGVPSP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LV Sbjct: 241 VLLGVVTGFMALIPGGAPLSFTLVSLYLVGSGHVVAGIALMVWGSVELFIVDKTLRPRLV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GGP+KLPFLPTFFGLVGGV+TMGL+GLF+GPVLMAL+ +W+E + + ++ S+ Sbjct: 301 GGPVKLPFLPTFFGLVGGVKTMGLVGLFVGPVLMALLVAVWREWVHHEVQERDAERSH 358 >gi|113968823|ref|YP_732616.1| hypothetical protein Shewmr4_0479 [Shewanella sp. MR-4] gi|113883507|gb|ABI37559.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 372 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 232/350 (66%), Gaps = 2/350 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y + K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIILGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + P L + N I R+ + G L L+++FM+I LFF Y+DG S Sbjct: 124 QQFIGEPHELGKIVSAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGES 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + + Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDDPSTE 352 >gi|153002392|ref|YP_001368073.1| hypothetical protein Shew185_3886 [Shewanella baltica OS185] gi|151367010|gb|ABS10010.1| protein of unknown function UPF0118 [Shewanella baltica OS185] Length = 359 Score = 249 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 165/350 (47%), Positives = 229/350 (65%), Gaps = 2/350 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASEL 122 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 QVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPET 351 >gi|307822136|ref|ZP_07652368.1| calcium-translocating P-type ATPase, PMCA-type [Methylobacter tundripaludum SV96] gi|307736702|gb|EFO07547.1| calcium-translocating P-type ATPase, PMCA-type [Methylobacter tundripaludum SV96] Length = 1256 Score = 249 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 5/337 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ F + ALII + WP Y + + +T A + T + + + + +L Sbjct: 26 GFMVLREFLLTLAWALIIAYVVWPPYRYLRQQLKGDATLSAAVMTTIIAAVLFLTVYWLV 85 Query: 83 YYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 E+K V Q+ +P ++S IP ++ W + L+ ++ I Sbjct: 86 AMLQDELKTAYQTLVSDFGQNTYRLPDFISRIPWLGSTAQEWLERLTDDRAAVIAQFADW 145 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 +F G Y + + +++ +FF +RDG +QL Y Sbjct: 146 AQQWSGEFAKFLGGIGR----YIMKLGVILVTVFFCFRDGDEAVRQLHQGLVRFLGKYQD 201 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 R+ G+ + A+G+G++ G Y +AGV + V LG +TA++A++P GA + Sbjct: 202 VYLEAAGHTTRAVVYGLVLAALGQGMLAGLGYAVAGVQAPVLLGAVTALLALVPMGATLV 261 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V I L++ + L LWG + + VD +RP ++ G ++PFL FG++GG+ Sbjct: 262 WMPVGIVLVLTEQTWQGIGLLLWGFLVVSTVDNVIRPLVISGAGRIPFLVVLFGVLGGLS 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GLF+GPV++A++ +W+ + + ++ S Sbjct: 322 AFGAIGLFLGPVILAVLLSVWQAWLKLQQHEEQTHES 358 >gi|117918932|ref|YP_868124.1| hypothetical protein Shewana3_0477 [Shewanella sp. ANA-3] gi|117611264|gb|ABK46718.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 368 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 166/349 (47%), Positives = 234/349 (67%), Gaps = 2/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIIVGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + P L + N I R+ + G L L+++FM+I LFF Y+DG S Sbjct: 124 QQFIGEPHELGKIVSAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGES 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + ++ Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDEPDH 351 >gi|126172699|ref|YP_001048848.1| hypothetical protein Sbal_0447 [Shewanella baltica OS155] gi|125995904|gb|ABN59979.1| protein of unknown function UPF0118 [Shewanella baltica OS155] Length = 360 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 229/349 (65%), Gaps = 2/349 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASEL 122 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 QVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|114049038|ref|YP_739588.1| hypothetical protein Shewmr7_3551 [Shewanella sp. MR-7] gi|113890480|gb|ABI44531.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 364 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIIVGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + P L + N I R+ + G L L+++FM+I LFF Y+DG S Sbjct: 124 QQFIGEPHELGKIVSAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGES 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERILPARWHRFSRVVPTTVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + + Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDDPSAE 352 >gi|304410810|ref|ZP_07392427.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307305019|ref|ZP_07584769.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304350707|gb|EFM15108.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306912421|gb|EFN42845.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 360 Score = 247 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 229/349 (65%), Gaps = 2/349 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASEL 122 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWIGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 QVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|160877112|ref|YP_001556428.1| hypothetical protein Sbal195_4008 [Shewanella baltica OS195] gi|160862634|gb|ABX51168.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|315269316|gb|ADT96169.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 360 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 229/349 (65%), Gaps = 2/349 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASEL 122 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGQ 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 QVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|222149993|ref|YP_002550950.1| permease [Agrobacterium vitis S4] gi|221736975|gb|ACM37938.1| permease [Agrobacterium vitis S4] Length = 349 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 232/350 (66%), Gaps = 2/350 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ P RW+++ +++ S YF GF P+L+A++IGF SWPIY +S + T A Sbjct: 1 MVAPTSAARWLLLAVLMASAYFFYGFIVPLLAAMVIGFASWPIYRRILSLARGNRTIGAT 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELW 123 IA + V+ +VP+ Y + E+K + AN+ G PVP+WL +P G W SE W Sbjct: 61 IAIILVVSFIVVPISLAGIYAVDEVKSWGVWALRANEVGAPVPQWLIQVPLAGAWLSEHW 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +++ HP +L L + + I I R G L+++FM+IALFF YRDG Sbjct: 121 DQYVGHPGALGELVQ-LISGANIGTIYRGLLVVGSSAFHSFLTLLFMLIALFFVYRDGER 179 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I Q+D +GE + P W+++SR+VP I ST GMTIIA+GEG+VLG AYW+AGVPS V Sbjct: 180 IVAQVDIVGERILPGRWERVSRLVPLTISSTVTGMTIIAVGEGIVLGLAYWIAGVPSPVT 239 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG+IT MA+IPGGAP+SFT VSIYL+ G+ L WG +ELFIVDKTLRP LVGG Sbjct: 240 LGIITGFMALIPGGAPLSFTLVSIYLVASGSTIAGVGLLAWGTVELFIVDKTLRPRLVGG 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 PIKLPFLPTFFGL+GGV+TMG+LGLF+GPVLMA++ IW+E ++ K+ + Sbjct: 300 PIKLPFLPTFFGLIGGVKTMGMLGLFVGPVLMAILVAIWREWLLEAKQPE 349 >gi|217974961|ref|YP_002359712.1| hypothetical protein Sbal223_3812 [Shewanella baltica OS223] gi|217500096|gb|ACK48289.1| protein of unknown function UPF0118 [Shewanella baltica OS223] Length = 356 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 229/349 (65%), Gaps = 2/349 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASEL 122 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P G W + Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGQ 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 QVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|120597402|ref|YP_961976.1| hypothetical protein Sputw3181_0571 [Shewanella sp. W3-18-1] gi|146294457|ref|YP_001184881.1| hypothetical protein Sputcn32_3370 [Shewanella putrefaciens CN-32] gi|120557495|gb|ABM23422.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] gi|145566147|gb|ABP77082.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] Length = 360 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 228/350 (65%), Gaps = 2/350 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASEL 122 IA V ++ ++PL F+F Y + E++ V +V NQHG VP W+ ++P G W + Sbjct: 63 TIALVLIVLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WHEFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 HVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPET 351 >gi|24372067|ref|NP_716109.1| hypothetical protein SO_0472 [Shewanella oneidensis MR-1] gi|24345945|gb|AAN53554.1|AE015495_8 membrane protein, putative [Shewanella oneidensis MR-1] Length = 373 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 166/349 (47%), Positives = 231/349 (66%), Gaps = 2/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALII F+SWP+Y + K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIICFSSWPLYKKLLVKCGGRSAVAAS 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELW 123 IA V ++ I PL+F+F Y + E++ +V ANQHG PVP W+ D+P G W + W Sbjct: 64 IALVLIVLGLITPLIFVFSYALQEIRIWAEWLVYANQHGAPVPLWIKDLPWVGEWLTLQW 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + P L + N I R+ + G L L+++FM+I LFF Y+DG S Sbjct: 124 QQFIGEPHELGQIVSAISGQNLTG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGES 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++Q+D +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQVDVVGERILPARWYRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + + Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLRDDPDT 351 >gi|317405134|gb|EFV85477.1| hypothetical protein HMPREF0005_04798 [Achromobacter xylosoxidans C54] Length = 373 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +L I RW+++ ++L +YFL GF P L+ALIIG SWP+Y +++ + Sbjct: 2 QPVLPAYLIARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVARCGGRTALA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 A +A + V+ + IVPL Y + E + + AN+HG+ VP W++ +P G SE Sbjct: 62 ASLALLVVIVVLIVPLSLALSYAIKEASTFFAWAIAANRHGVDVPNWITSMPVVGDRLSE 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W ++ P +L L E + + I R L+++FM+I LFF Y+DG Sbjct: 122 YWQAYIGQPHALGALVEAVSGEHLGN-IYRMVLAATGNVFQLLLTVLFMLITLFFVYKDG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + QLD LGE + PA W++ SR+VP I ST GM +IA+GEG+VLG AYW+AGVPS Sbjct: 181 MRMVAQLDVLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGVVLGIAYWVAGVPSP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LV Sbjct: 241 VLLGVVTGFMALIPGGAPLSFTLVSLYLVGSGHVVAGIALMVWGSVELFIVDKTLRPRLV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GGP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ +W+E + + ++ Sbjct: 301 GGPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAVWREWVHHEEAERD 353 >gi|311109042|ref|YP_003981895.1| hypothetical protein AXYL_05884 [Achromobacter xylosoxidans A8] gi|310763731|gb|ADP19180.1| hypothetical protein AXYL_05884 [Achromobacter xylosoxidans A8] Length = 366 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 161/358 (44%), Positives = 229/358 (63%), Gaps = 2/358 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +L I RW+++ ++L +YFL GF P L+ALIIG SWP+Y +++ + Sbjct: 2 QPVLPAYLIARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVARCGGRTALA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 A +A + V+ + IVP+ Y + E + + AN+HG+ VP W++ +P G + Sbjct: 62 ASLALLVVIVVLIVPMSLALSYAIKEASTFFAWAIAANRHGVDVPNWITSMPVVGERLGQ 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W ++ P +L L E + + I R L+++FM+I LFF Y+DG Sbjct: 122 YWEAYIGQPHALGALVEAVSGEHLGN-IYRMVLAATGNVFQLLLTVLFMLITLFFVYKDG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + QLD LGE + PA W++ SR+VP I ST GM +IA+GEGLVLG AYW+AGVPS Sbjct: 181 IRMVAQLDVLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGLVLGIAYWVAGVPSP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LV Sbjct: 241 VLLGVVTGFMALIPGGAPLSFTLVSLYLVGSGHLVAGIALMVWGSVELFIVDKTLRPRLV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GGP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ +W+E + + ++ N Sbjct: 301 GGPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAVWREWVHHEVQERDAARIN 358 >gi|262370626|ref|ZP_06063951.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314426|gb|EEY95468.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 373 Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 96/356 (26%), Positives = 179/356 (50%), Gaps = 8/356 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ Q ++ + ++FI+ +S LK F PVL A II + +WP+Y S Sbjct: 1 MQRYAPALQKVLLFGLIFILFYLSFQVLKYFIVPVLWAAIIAYITWPLYHSVQKLCGPRP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GM 117 T A I V+ + +PL F + E + L ++ G + VP+++ D+P G Sbjct: 61 TLSATIMISMVVLVVGIPLTFAIFMLQHEGRNLFYELQRQVFSGHLDVPQFIRDLPIIGK 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + P S+ + +++ + + F +++LFFF Sbjct: 121 EVTRTLKEINTDPNSIVQNVSGWFQSH-----LNYGRLVLSEISKNIFKLCFAVMSLFFF 175 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 YRDG +I Q+ E + + + R+ G+ + AI + L+ G +Y++AG Sbjct: 176 YRDGQTILNQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQALLAGLSYFVAG 235 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP+ + L ++T I A+IP G P++++AVS++L +G A + +WG + D +R Sbjct: 236 VPNPMVLTIVTFIFALIPFGPPVAYSAVSLWLFSQGQTIEAIGVMVWGVCVVSTADNVIR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++ G ++PFL FG++GG+ + G++GLF+GPV++A++ IW+E + + Sbjct: 296 PLVISGATQIPFLLIMFGVLGGLASFGMVGLFVGPVILAVLLAIWREWLHEQVHDP 351 >gi|255319865|ref|ZP_05361070.1| putative membrane protein [Acinetobacter radioresistens SK82] gi|262380394|ref|ZP_06073548.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255303184|gb|EET82396.1| putative membrane protein [Acinetobacter radioresistens SK82] gi|262297840|gb|EEY85755.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 372 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 97/363 (26%), Positives = 186/363 (51%), Gaps = 8/363 (2%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M++ Q ++ + + FI + + + LK F PVL A II + +WP+Y S + S Sbjct: 1 MQQYAPTLQRVLLFGLFFILVFLGFHVLKYFIVPVLWAAIIAYMTWPLYLSIQRMCGQRS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GM 117 + A + V ++ + +PL F + E + L ++ G + VP ++ ++P G Sbjct: 61 SISASVMIVLIILVIGIPLTFAIFILQHEGRNLYYELQRQIFSGHVSVPDFIRELPIIGK 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + PQS+ +++ + + + + F I++LFFF Sbjct: 121 EVTRTLKELNTDPQSITQNVAAWIQGH-----LGYGRFVLNEISKNIIKLCFAIMSLFFF 175 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 YRDG +I +Q+ + E + + + R+ G+ + AI + ++ G +Y +AG Sbjct: 176 YRDGQTILRQVSTAMEKVIGPRIHHYMDTISETTRAVVYGVGLTAIAQAILAGLSYVVAG 235 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP+ + L + T ++A+IP G P+++ +V+++L +G A +F WG + D +R Sbjct: 236 VPNPMVLTIATFLLALIPFGTPVAYGSVALWLFSQGQTVEAIGVFAWGVCIVSTSDNVIR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P ++ G ++PFL FG++GGV + GL+GLFIGPV++A+I IW+E + E + Sbjct: 296 PLVISGATQIPFLLIMFGVLGGVASFGLVGLFIGPVILAVILAIWREWLHETTEPEPMPD 355 Query: 358 SNF 360 ++ Sbjct: 356 ASL 358 >gi|319427812|gb|ADV55886.1| protein of unknown function UPF0118 [Shewanella putrefaciens 200] Length = 360 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 164/349 (46%), Positives = 228/349 (65%), Gaps = 2/349 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASEL 122 IA V ++ ++PL F+F Y + E++ V +V NQHG VP W+ ++P G W + Sbjct: 63 TIALVLIVLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQ 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + P L + N I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WHEFIGEPHELGKIISAISGQNLSG-ISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS V Sbjct: 182 HVAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 A GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVG Sbjct: 242 AFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GPIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 302 GPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|330428410|gb|AEC19744.1| membrane protein [Pusillimonas sp. T7-7] Length = 361 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 171/356 (48%), Positives = 226/356 (63%), Gaps = 2/356 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +L I RW+++ +ILV LYFL GF PVL+ALII SWP+Y + + + Sbjct: 2 HPVLPAFLIARWLLVLLILVGLYFLSGFLVPVLAALIISLASWPLYQRLLRRCHGRNALA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 A +A + V+ + IVPL Y + E ++ + AN+HG+PVP W+ +P G +E Sbjct: 62 ASLALIIVIIVLIVPLSLALSYAVQEASNFIAWALAANRHGMPVPAWILALPLVGARLAE 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 WT +L P +L + E + + I R L +IFM+I LFF Y+DG Sbjct: 122 YWTTYLGEPHALGEMVEIVSGEHLGN-IYRMLLSATGDVFRLLLGVIFMLITLFFVYKDG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I QLD +G+ + P W++ SR+VP I ST GM +IA+GEG+VLG AYW+AGVPS Sbjct: 181 AHILGQLDIVGDRILPGRWRRFSRVVPATINSTVTGMGLIALGEGVVLGLAYWIAGVPSP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGVIT MA+IPGGAP+SF+ VS+YL+ G LFLWG +ELFIVDKTLRP LV Sbjct: 241 VLLGVITGFMALIPGGAPLSFSVVSLYLVGSGEPMAGLGLFLWGTVELFIVDKTLRPRLV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GGP+KLPFLPTFFGL+GGV+TMGL+GLF+GPVLMAL+ IW+E I K+S Sbjct: 301 GGPVKLPFLPTFFGLIGGVQTMGLVGLFVGPVLMALLVAIWREWIHEDDNKIAKLS 356 >gi|262377359|ref|ZP_06070583.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262307812|gb|EEY88951.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 376 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 96/356 (26%), Positives = 186/356 (52%), Gaps = 8/356 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M++ Q ++ + + FI++ +S + LK F PV+ A II + +WP+Y S + Sbjct: 1 MQQYAPTLQKVLLFGLFFILIFLSFHILKYFIIPVVWAAIIAYMTWPLYQSVLRLCGNRP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GGM 117 T A + ++V+ +F +P +F + E + L ++ G + VP ++ +P G Sbjct: 61 TLSATVMILAVILVFGLPFIFAIFMLQHEGRNLYFELQRQVFSGHLNVPDFIRGLPIVGK 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + PQS+ + T+++ + + + F +++LFFF Sbjct: 121 EITRTLNEINTDPQSIALSVSTWIQGH-----LNYGKVVLNEVSKNIFKLCFAVLSLFFF 175 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 YRDG +I Q+ E + + R+ G+ + AI + L+ G +Y++AG Sbjct: 176 YRDGQTILNQVRKAFEMVVGPRVHHYFSTISATTRAVVYGVGLTAIAQSLLAGLSYFVAG 235 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP+ + L ++T I A+IP G P++++AV+++L +G A + +WG + D +R Sbjct: 236 VPNPMVLTIVTFIFALIPFGPPLAYSAVALWLFSQGQTIEAIGVMVWGVCIVSTADNVIR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++ G ++PFL FG++GG+ + GL+G+FIGPV++A++ IW+E + N+ Sbjct: 296 PLVISGATQIPFLLIMFGVLGGIASFGLVGVFIGPVILAVLLAIWREWLHESNLNE 351 >gi|330875659|gb|EGH09808.1| hypothetical protein PSYMP_10962 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 348 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 82/331 (24%), Positives = 154/331 (46%), Gaps = 7/331 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +GLFIGP L+A+ + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSER 344 >gi|330959036|gb|EGH59296.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 349 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 157/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ ++ M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMSLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKNIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSA-QIGGGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A + +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAVFMGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNSR 349 >gi|257486360|ref|ZP_05640401.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628087|ref|ZP_06461041.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646709|ref|ZP_06478052.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] gi|320324915|gb|EFW80987.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. B076] gi|320329281|gb|EFW85278.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867463|gb|EGH02172.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331010639|gb|EGH90695.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 349 Score = 238 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARSSR 349 >gi|330987461|gb|EGH85564.1| putative lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 349 Score = 238 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGER 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARSSR 349 >gi|71734505|ref|YP_274223.1| putative lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555058|gb|AAZ34269.1| lipoprotein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 349 Score = 238 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALIWGAVLAFASWPLMRLLNRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARSSR 349 >gi|330980752|gb|EGH78855.1| hypothetical protein PSYAP_19606 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 348 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 154/334 (46%), Gaps = 7/334 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWILARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGER 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +GLFIGP L+A+ + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARP 347 >gi|28869423|ref|NP_792042.1| lipoprotein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852664|gb|AAO55737.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|331016291|gb|EGH96347.1| lipoprotein, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 349 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 157/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGLWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSA-QIGGGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|312959876|ref|ZP_07774391.1| hypothetical protein PFWH6_1780 [Pseudomonas fluorescens WH6] gi|311285823|gb|EFQ64389.1| hypothetical protein PFWH6_1780 [Pseudomonas fluorescens WH6] Length = 353 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 86/355 (24%), Positives = 164/355 (46%), Gaps = 7/355 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + S + + F++ + ++ F SWP+ + A Sbjct: 2 LNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASEL 122 I T+ M L VPL++L + +++ V+ + G+P P WL IP G + Sbjct: 62 ILTLGWMLLVAVPLVWLGFNLADHVRDAVALIKDIQVDGLPEAPTWLGSIPFVGERLVGM 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W +L + + +L G + R A + G L+ LS++F +FFFYRDG Sbjct: 122 WNSIDQQGAALMVSIKPYLGQVGNWLLARSA-QIGGGILELTLSLVF----VFFFYRDGP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L E L +V ++ G+ A + ++ + +AGVP + Sbjct: 177 RLAMFVHRLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGAL 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++T ++++IP G P+ + + +L KG+ A L +WG + VD L+P+L+ Sbjct: 237 VLGIVTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 297 RGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLMDWSATHAPRRPEDK 351 >gi|66045269|ref|YP_235110.1| hypothetical protein Psyr_2029 [Pseudomonas syringae pv. syringae B728a] gi|302187399|ref|ZP_07264072.1| hypothetical protein Psyrps6_13658 [Pseudomonas syringae pv. syringae 642] gi|63255976|gb|AAY37072.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] gi|330973446|gb|EGH73512.1| hypothetical protein PSYAR_23439 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 348 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 82/331 (24%), Positives = 154/331 (46%), Gaps = 7/331 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWILARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGER 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +GLFIGP L+A+ + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSER 344 >gi|213968162|ref|ZP_03396307.1| lipoprotein [Pseudomonas syringae pv. tomato T1] gi|301383833|ref|ZP_07232251.1| lipoprotein, putative [Pseudomonas syringae pv. tomato Max13] gi|302133398|ref|ZP_07259388.1| lipoprotein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927142|gb|EEB60692.1| lipoprotein [Pseudomonas syringae pv. tomato T1] Length = 349 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + + G+P P+WL+ IP G WT + + Sbjct: 79 GFNLADHVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGFWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSA-QIGGGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|330888175|gb|EGH20836.1| putative lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 349 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 155/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGIFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARSSR 349 >gi|330965376|gb|EGH65636.1| lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 349 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 157/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + + G+P P+WL+ IP G +WT + + Sbjct: 79 GFNLADHVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGVWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSA-QIGGGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|70729140|ref|YP_258876.1| hypothetical protein PFL_1750 [Pseudomonas fluorescens Pf-5] gi|68343439|gb|AAY91045.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 350 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 S + + F++ + ++ F SWP+ + A + T+ M L PL++L Sbjct: 19 ASFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLNGRESLAAALLTLGWMVLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 +++ + + G+P P WL ++P G LW +L + + Sbjct: 79 GLNLADHVRDATAFIKDVQVDGLPAAPEWLGNLPLVGERLVGLWNSIDQQGAALMLAVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F +FFFYRDG ++ + L E L Sbjct: 139 YLGQVGNWLLARSA-QIGGGILELTLSIVF----VFFFYRDGPRLALFVHKLLERLIGER 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +V ++ G+ A +GL+ + +AGVP + LG++T ++++IP G P Sbjct: 194 AGYYIDLVAGTVQRVVNGVIGTAAAQGLLALIGFLIAGVPGALVLGIVTFLLSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + +E Sbjct: 314 LIAFGFIGLFIGPTLLAVAYSLLLDWSASQARAQEP 349 >gi|160898931|ref|YP_001564513.1| hypothetical protein Daci_3492 [Delftia acidovorans SPH-1] gi|160364515|gb|ABX36128.1| protein of unknown function UPF0118 [Delftia acidovorans SPH-1] Length = 387 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 145/353 (41%), Gaps = 5/353 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +++ + L F + + + P++ +++ + A+ Sbjct: 4 LPLHKRTFMLLLIAATIGFGAVLWEFMGAIFWGVALAILFSPLHRRLLARMPRRTNLAAL 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELW 123 + + + I+PL + + E + +V N G + + + +P W + Sbjct: 64 STLLLCLVVAILPLALIGASLVREASLIYERVNSGNLDAGTYLQQIMDALP--SWVTPWL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + A G + + M+ LFF RDG Sbjct: 122 ERLHLGSLAELQDKLSSIAMQASKLAATKALGIGQNTFGFLVGFCVMLYLLFFLLRDGRD 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++Q++ + L + ++S VIR+T G +A +G + G +W+ G+ V Sbjct: 182 LTQRI-RMAIPLQADHKAELSSKFTTVIRATVKGNLAVAAAQGALGGLIFWILGIQGPVL 240 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV+ A ++++P GA + + V+IY L G + L +G + + +VD LRP LVG Sbjct: 241 WGVVMAFLSLLPAVGAGLIWAPVAIYFLATGAMGKGLILIAYGVLVIGLVDNVLRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 K+P +GG+ GL G IGPV+ AL IW +++EK Sbjct: 301 KDTKMPDYIVLISTLGGMALFGLTGFVIGPVIAALFMAIWDMFSRMQVQDEEK 353 >gi|289679981|ref|ZP_06500871.1| hypothetical protein PsyrpsF_42172 [Pseudomonas syringae pv. syringae FF5] Length = 348 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 154/334 (46%), Gaps = 7/334 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWILARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGER 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +GLFIGP L+A+ + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARP 347 >gi|158424265|ref|YP_001525557.1| hypothetical protein AZC_2641 [Azorhizobium caulinodans ORS 571] gi|158331154|dbj|BAF88639.1| putative membrane protein [Azorhizobium caulinodans ORS 571] Length = 388 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 144/338 (42%), Gaps = 3/338 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 QG +I+ + + + L F+ +L A+I+ P+ + A + Sbjct: 42 NVQQGSFLALIVLVSVAFAWLLLPFYGALLWAVILAILFNPLNRWLTRLLGGRANLAAAL 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ +C+ ++P + E EL +V + + D+ L Sbjct: 102 SVLACICIVVIPGSMILASLAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPPF 161 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ +FL I A G +S+ M+ LFF +RDG S++ Sbjct: 162 TGDTFKEIESRLASFLG-QASQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLA 220 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L P + + + V+++T G IIA+ +GL+ G A+W G+ + + G Sbjct: 221 LAIRRTSP-LSPHHTESLFAKFSDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWG 279 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V A+++++P GA + + + YL++ G L G + ++D LRP LVG Sbjct: 280 VSMAVLSLVPAVGAALVWGPTAAYLMLSGQYLKGAILLGIGIFVISMIDNLLRPPLVGKG 339 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP +GG+ G+ G IGP++ A+ IW Sbjct: 340 TRLPDYMVLVSTLGGISLFGVNGFVIGPLIAAMFVAIW 377 >gi|229589365|ref|YP_002871484.1| hypothetical protein PFLU1848 [Pseudomonas fluorescens SBW25] gi|229361231|emb|CAY48095.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 353 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 164/355 (46%), Gaps = 7/355 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + S + + F++ + ++ F SWP+ + A Sbjct: 2 LNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASEL 122 I T+ M L +PL++L + +++ + + G+P P WL IP G + Sbjct: 62 ILTLCWMLLVALPLVWLGFNLADHVRDATALIKDIQVDGLPAAPTWLGSIPFVGERLVAM 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W +L + + +L G + R A + G L+ LS++F +FFFYRDG Sbjct: 122 WDSIDQQGAALMVSIKPYLGQVGNWLLARSA-QIGGGILELTLSLVF----VFFFYRDGP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L E L +V ++ G+ A + ++ + +AGVP + Sbjct: 177 RLAMFVHRLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGAL 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++T ++++IP G P+ + + +L KG+ A L +WG + VD L+P+L+ Sbjct: 237 VLGIVTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 297 RGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLMDWSATQAQGRREDK 351 >gi|330951703|gb|EGH51963.1| hypothetical protein PSYCIT7_10049 [Pseudomonas syringae Cit 7] Length = 348 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 82/331 (24%), Positives = 154/331 (46%), Gaps = 7/331 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGEG 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +GLFIGP L+A+ + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSER 344 >gi|167034729|ref|YP_001669960.1| hypothetical protein PputGB1_3734 [Pseudomonas putida GB-1] gi|166861217|gb|ABY99624.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 350 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 7/333 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + F + +L I+ F SWP+ T A + T + + + +PL++L + Sbjct: 22 WVMAPFISALLWGAILAFASWPLMRLLTRLLGGRETLAASLLTTAWILIVALPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +++ + V G+P P WL IP G W +L ++ + Sbjct: 82 LADHIRDATAFVRDVQVDGLPEAPAWLGGIPFVGERLVNWWQSLDQQGAALLASAKPYFG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A + G L+ LS++F +FFFYRDG ++ + L L + Sbjct: 142 QVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGPRLAAFVLRLLHRLMGERAEY 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++V ++ G+ A +GL+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 197 YLQLVAGTVQRVVNGVIGTAAAQGLLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAW 256 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +L+ KG A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 257 IPATGWLVWKGEYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLA 316 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GLFIGP L+A+ + + + + Sbjct: 317 FGFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQ 349 >gi|302058489|ref|ZP_07250030.1| lipoprotein, putative [Pseudomonas syringae pv. tomato K40] Length = 349 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDI-PGGMWASELWTKHLSHPQSLKILSET 139 + +++ + + G+P P+WL+ I G WT + + Sbjct: 79 GFNLADHVRDATALIKDIQVDGLPDPPQWLAGIQLVGERLVGFWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSA-QIGGGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + + + Sbjct: 314 LLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|325123669|gb|ADY83192.1| hypothetical protein BDGL_002606 [Acinetobacter calcoaceticus PHEA-2] Length = 372 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-S 58 M N Q ++ + + FI++ + LK F PVL A II + +WPIY E Sbjct: 1 MHPYAPNLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGESR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GG 116 +T A + V+ + +P + E + L + G + VP ++ D+P G Sbjct: 61 NTLNATLMISLVILVVGIPFTCAVFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVG 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S + + P S +++++ + + + F + +LFF Sbjct: 121 KEISRTLNELNNDPNSTIQNIAAWVQSH-----LSYGRVLLGEISKNIVKLGFAVFSLFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG I Q+ E + + + R+ G+ + AI + ++ G +Y++A Sbjct: 176 FYRDGQMILSQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVA 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ + L ++T ++A+IP G PIS+ V ++L +G A + +WG + + D + Sbjct: 236 GVPNPMVLTIVTFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVLIVSSSDNVI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 RP ++ G K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + Sbjct: 296 RPLVISGATKIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPE 352 >gi|293610761|ref|ZP_06693061.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827105|gb|EFF85470.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 372 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-S 58 M N Q ++ + + FI++ + LK F PVL A II + +WPIY E Sbjct: 1 MHPYAPNLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGESR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GG 116 +T A + V+ + +P + E + L + G + VP ++ D+P G Sbjct: 61 NTLNATLMISLVILVVGIPFTCAVFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVG 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S + + P S +++++ + + + F + +LFF Sbjct: 121 KEISRTLNELNNDPNSTIQNIAAWVQSH-----LSYGRVLLGEISKNIVKLGFAVFSLFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG I Q+ E + + + R+ G+ + AI + ++ G +Y++A Sbjct: 176 FYRDGQMILSQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVA 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ + L ++T ++A+IP G PIS+ V ++L +G A + +WG + + D + Sbjct: 236 GVPNPMVLTIVTFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVLIVSSSDNVI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 RP ++ G K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + Sbjct: 296 RPLVISGATKIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPE 352 >gi|238025001|ref|YP_002909233.1| hypothetical protein bglu_2g16580 [Burkholderia glumae BGR1] gi|237879666|gb|ACR31998.1| Hypothetical protein bglu_2g16580 [Burkholderia glumae BGR1] Length = 364 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 143/349 (40%), Gaps = 3/349 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ + Q ++++ + + + L FF + I+ P+ + + Sbjct: 15 ESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQRWLAAHFGKRRNLA 74 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ +++ + I+PL F+ + E+ + +V + + + + L Sbjct: 75 ALVTLSAIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQQVVHALPTSLQRVL 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 135 HSYGLADIAGIQKKLTD-GAAAISQFVATQAFSIGQNTFQFVVSFGVMLYLVFFLLRDGG 193 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + V+R+T G +A+ +G + G +W+ G+ + Sbjct: 194 EIGRRVRRALP-LDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGGVIFWILGIEGAL 252 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + ++Y + G I+ L ++ + +VD LRP LV Sbjct: 253 LWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVIGLVDNLLRPILV 312 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G K+P +GG+ G+ G IGP++ AL W A + Sbjct: 313 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQ 361 >gi|77460421|ref|YP_349928.1| hypothetical protein Pfl01_4200 [Pseudomonas fluorescens Pf0-1] gi|77384424|gb|ABA75937.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 346 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 83/326 (25%), Positives = 151/326 (46%), Gaps = 7/326 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 S + + F++ + ++ F SWP+ + A++ T+ M L PL++L Sbjct: 19 ASFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLNGRESLAALLLTMGWMLLVAGPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + + G+P P WL +P G +W +L + + Sbjct: 79 GFNLADHVRDATAFIKDVQVDGLPEAPSWLGGVPLVGERLVGIWNSIDQQGAALMVTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F +FFFYRDG ++ + SL E L Sbjct: 139 YLGQVGNWLLARSA-QIGSGILELTLSIVF----VFFFYRDGPRLAAFVHSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +V ++ G+ A + ++ + +AGVP + LG++T ++++IP G P Sbjct: 194 AGYYIDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVLGIVTFLLSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 + G +GLFIGP L+A+ + + Sbjct: 314 LIAFGFIGLFIGPTLLAVAYSLLTDW 339 >gi|21958751|gb|AAM85497.1|AE013795_7 hypothetical protein y1931 [Yersinia pestis KIM 10] gi|45436849|gb|AAS62402.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] Length = 382 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 140/346 (40%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 34 IFIMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILL 93 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P W+ IP G W +S + Sbjct: 94 FVIPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGAN 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F ++ Y G ++ + Sbjct: 154 ALMAKVQPYIGATATWFVAQAAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHFA 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 210 MRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICC 269 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 270 VAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMILI 328 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 329 LSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 374 >gi|312796207|ref|YP_004029129.1| hypothetical protein RBRH_03616 [Burkholderia rhizoxinica HKI 454] gi|312167982|emb|CBW74985.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 414 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 149/354 (42%), Gaps = 5/354 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 Q + ++ + L ++ L FF + I+ P+ + ++ + A+ Sbjct: 33 RNQRGFQVLLYAVSLALVWILLPFFGAIFWGAILAILFQPLQRTLTARLGNRANLAALAT 92 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTK 125 + + I+P+ + + E+ ++ + + + +P +A Sbjct: 93 LSLCVLVVILPVSLMIGTLVQEVSFAYEQIKTGQWNVTLYFQKAVGALPA--FAQHWLND 150 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 T F+ A G L + + M+ +FF RDG +IS Sbjct: 151 VGLADMQSLQAKLTEGAARISQFVAAQAVEIGQNTLQFAVGFGIMLYMVFFLLRDGSAIS 210 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L ++ +K+ V+R+T G +A +GL+ G +++ G+ + G Sbjct: 211 RRIREAVP-LADSHKQKLLGKFTTVVRATVKGNIAVAAVQGLLGGLIFFILGISGSLLWG 269 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A+++++P G+ + + +IY L+ G ++ A L L+ ++ + VD LRP LVG Sbjct: 270 TLMALLSLLPAIGSALVWGPAAIYFLLAGPLWKAVVLGLFCSLVIGGVDNILRPILVGKD 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 KLP VGG+ T G+ G IGP++ AL W S++ ++ S Sbjct: 330 TKLPDWVVLISTVGGMATFGINGFVIGPLIAALFIACWDISVLIARDETHPSPS 383 >gi|227328036|ref|ZP_03832060.1| hypothetical protein PcarcW_12170 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 404 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 73/351 (20%), Positives = 153/351 (43%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+FI+ ++ + L +++ +L A ++ P+ S K + + +++ + + Sbjct: 12 ILILFIVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGVASLLTVLIIFL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L +PL + ++E+ + +++ +N Q + + + +P WA +H Sbjct: 72 LVFIPLGVIVSSLVVEINGVYTRLQDSNTQFPVVLAELIQHLP--KWARHFLAEHNLDNA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G ++ G + + M+ LFF +DG + + Sbjct: 130 AKIQQELSQVVLKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGAYLVNLILE- 188 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++AI +G + G A+ +AG+ + G + A + Sbjct: 189 SLPLSTHVKHHLLVKFAAVSRATVKGTVVVAIVQGTLGGIAFSIAGIEGSLLWGSLMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +++L ++ A + + + + +VD LRP LVG K+P Sbjct: 249 SLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S +EN E I +F Sbjct: 309 LILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 359 >gi|262280291|ref|ZP_06058075.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262258069|gb|EEY76803.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 372 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 98/357 (27%), Positives = 172/357 (48%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-S 58 M N Q ++ + + FI++ + LK F PVL A II + +WPIY E Sbjct: 1 MHPYAPNLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGETR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GG 116 +T A + V+ + +P + E + L + G + VP ++ D+P G Sbjct: 61 NTLNATLMISLVILVVGIPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVG 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S + + P S +++++ + + + F + +LFF Sbjct: 121 KEISRTLNELNNDPNSTIQNIAAWVQSH-----LSYGRVLLGEISKNIVKLGFAVFSLFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG I Q+ E + + + R+ G+ + AI + + G +Y++A Sbjct: 176 FYRDGQLILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAFLAGLSYFVA 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ + L + T I+A+IP G PIS+ V ++L +G A + +WG + + D + Sbjct: 236 GVPNPMVLTIATFILALIPFGTPISYLGVGLWLFSQGQTMEAIGVIVWGILIVSSSDNVI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 RP ++ G K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + Sbjct: 296 RPLVISGATKIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPE 352 >gi|193078525|gb|ABO13539.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] Length = 372 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 172/357 (48%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ES 58 M Q ++ + + FI++ + LK F PVL A II + +WPIY Sbjct: 1 MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-G 116 + A + V+ + VP + E + L + G + VP ++ ++P G Sbjct: 61 NNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIG 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S + + P S +L+++ + + + F I++LFF Sbjct: 121 KEISRTLNEINTDPNSTIQNIAAWLQSH-----LSYGRVLLNEISKNIVKLCFAILSLFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG +I Q+ E + + + R+ G+ + AI + ++ G +Y++A Sbjct: 176 FYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVA 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ + L + T ++A+IP G P+S+ V ++L +G A + LWG + + D + Sbjct: 236 GVPNPMVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 RP ++ G ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + + + Sbjct: 296 RPLVISGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPE 352 >gi|104782634|ref|YP_609132.1| hypothetical protein PSEEN3611 [Pseudomonas entomophila L48] gi|95111621|emb|CAK16342.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 350 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 7/333 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + F + +L I+ F SWP+ T A + T + L +PL++L + Sbjct: 22 WVMAPFISALLWGAILAFASWPLMRLLTRLLGGRETLAASLLTTVWILLVALPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +++ + V G+P P W+ IP G W +L ++ +L Sbjct: 82 LADHIRDATAFVRDVQVDGLPDAPAWVGSIPFVGGRLVSWWESLDQQGAALLASAKPYLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A + G L+ LS++F +FFFYRDG ++ + L L + Sbjct: 142 QVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGPRLAAFVHRLLHRLVGERAEY 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A + L+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 197 YVDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAW 256 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +L+ KG+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 257 IPATAWLVSKGDYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLIA 316 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GLFIGP L+A+ + + ++ + Sbjct: 317 FGFIGLFIGPTLLAVGYSLLLDWSRNSAQHTPQ 349 >gi|110835489|ref|YP_694348.1| hypothetical protein ABO_2628 [Alcanivorax borkumensis SK2] gi|110648600|emb|CAL18076.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 373 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 8/356 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR++ + + R + ++ VS F ++ FFAP+ A I +P++ +++ Sbjct: 1 MRDSGILEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPLHKRLLARWPT 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +A+ + + L ++P+L + + E L KV I + ++ + Sbjct: 61 RRNLVALFTLMLCVVLVVIPVLAVATSFVTEGVGLFQKVQSGE---IDLASYVDKVKHAF 117 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + T F+ + A G + L++ M+ FF Sbjct: 118 PGVQSLAERFDVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNTFQFFLNLGLMLYLAFFL 177 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RDG S+ L L + + +V R+T G ++AI +G + G +W G Sbjct: 178 IRDGDSMVAMLIRALP-LGDEREELLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLG 236 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P + GV+ A++++IP GA + + V++YL G++ AT L L+G + +VD L Sbjct: 237 IPGALLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATVLILFGVFVIGLVDNIL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 RP LVG KLP F +GG+ G+ G +GP+L AL W I E Sbjct: 297 RPILVGRDTKLPDYVVLFSTLGGLAMFGITGFAVGPLLAALFVAFWGIFIREFNEE 352 >gi|253690490|ref|YP_003019680.1| hypothetical protein PC1_4130 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757068|gb|ACT15144.1| protein of unknown function UPF0118 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 406 Score = 232 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 72/351 (20%), Positives = 153/351 (43%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+F++ ++ + L +++ +L A ++ P+ S K + + +++ + + Sbjct: 19 ILILFVVTLAFFDILAPYYSAILWAAVLAVIFHPLKSKIRQKLNDRNGVASLLTVLIIFL 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +PL + ++E+ + +++ +N Q + + L +P WA +H Sbjct: 79 IVFIPLGVIVSSLVVEINGVYTRLQDSNTQFPVVLAELLQHLP--KWARHFLAEHNLDNA 136 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G ++ G + + M+ LFF +DG + + Sbjct: 137 AKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGSYLVNLILE- 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++AI +G + G A+ +AG+ + G + A + Sbjct: 196 SLPLSTHVKHHLLVKFAAVSRATVKGTAVVAIVQGTLGGIAFSIAGIEGSLLWGSLMAFL 255 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +++L ++ A + + + + +VD LRP LVG K+P Sbjct: 256 SLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTKMPDY 315 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S +EN E I +F Sbjct: 316 LILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 366 >gi|169632288|ref|YP_001706024.1| hypothetical protein ABSDF0345 [Acinetobacter baumannii SDF] gi|169794531|ref|YP_001712324.1| hypothetical protein ABAYE0342 [Acinetobacter baumannii AYE] gi|184159661|ref|YP_001848000.1| permease [Acinetobacter baumannii ACICU] gi|213158897|ref|YP_002320895.1| hypothetical protein AB57_3597 [Acinetobacter baumannii AB0057] gi|215482119|ref|YP_002324301.1| hypothetical protein ABBFA_000368 [Acinetobacter baumannii AB307-0294] gi|239501916|ref|ZP_04661226.1| hypothetical protein AbauAB_06345 [Acinetobacter baumannii AB900] gi|260556965|ref|ZP_05829182.1| permease [Acinetobacter baumannii ATCC 19606] gi|294837967|ref|ZP_06782650.1| hypothetical protein A60131_08510 [Acinetobacter sp. 6013113] gi|294843277|ref|ZP_06787960.1| hypothetical protein A6014_15504 [Acinetobacter sp. 6014059] gi|294858709|ref|ZP_06796478.1| hypothetical protein A6013_08961 [Acinetobacter sp. 6013150] gi|301344848|ref|ZP_07225589.1| hypothetical protein AbauAB0_01365 [Acinetobacter baumannii AB056] gi|301513299|ref|ZP_07238536.1| hypothetical protein AbauAB05_17001 [Acinetobacter baumannii AB058] gi|301597602|ref|ZP_07242610.1| hypothetical protein AbauAB059_17343 [Acinetobacter baumannii AB059] gi|169147458|emb|CAM85319.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|169151080|emb|CAO99739.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] gi|183211255|gb|ACC58653.1| predicted permease [Acinetobacter baumannii ACICU] gi|213058057|gb|ACJ42959.1| hypothetical protein AB57_3597 [Acinetobacter baumannii AB0057] gi|213986092|gb|ACJ56391.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260409571|gb|EEX02872.1| permease [Acinetobacter baumannii ATCC 19606] gi|322509572|gb|ADX05026.1| permease [Acinetobacter baumannii 1656-2] gi|323519592|gb|ADX93973.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 372 Score = 232 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ES 58 M Q ++ + + FI++ + LK F PVL A II + +WPIY Sbjct: 1 MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-G 116 + A + V+ + VP + E + L + G + VP ++ ++P G Sbjct: 61 NNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIG 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S + + P S +++++ + + + F I++LFF Sbjct: 121 KEISRTLNEINTDPNSTIQNIAAWVQSH-----LSYGRVLLNEISKNIVKLCFAILSLFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG +I Q+ E + + + R+ G+ + AI + ++ G +Y++A Sbjct: 176 FYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVA 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ + L + T ++A+IP G P+S+ V ++L +G A + LWG + + D + Sbjct: 236 GVPNPMVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 RP ++ G ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + + + Sbjct: 296 RPLVISGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPE 352 >gi|50119081|ref|YP_048248.1| hypothetical protein ECA0120 [Pectobacterium atrosepticum SCRI1043] gi|49609607|emb|CAG73040.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 438 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 154/351 (43%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+F++ ++ + L +++ +L A ++ P+ S K + + +++ + + Sbjct: 51 ILILFVVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGLASLLTVLIIFL 110 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +PL + ++E+ + +++ +N Q + + +P WA T+H Sbjct: 111 IVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELFQHLP--KWARHFLTEHNLDNA 168 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G ++ G + + M+ LFF +DG + + Sbjct: 169 AKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGSYLVNLILE- 227 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++AI +G + G A+ +AG+ + G + A + Sbjct: 228 SLPLSTHVKHHLLVKFAAVSRATVKGTVVVAIVQGTLGGIAFSIAGIEGSLLWGSLMAFL 287 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +I+L ++ A + + + + +VD LRP LVG K+P Sbjct: 288 SLIPAVGSAIIWVPAAIFLFATDMLWQAIFIVAFFVLVIGVVDNILRPLLVGKDTKMPDY 347 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S +EN E IS +F Sbjct: 348 LILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGISEDF 398 >gi|260549903|ref|ZP_05824119.1| permease [Acinetobacter sp. RUH2624] gi|260407153|gb|EEX00630.1| permease [Acinetobacter sp. RUH2624] Length = 372 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 162/331 (48%), Gaps = 8/331 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYY 84 LK F PV+ A II + +WPIY + A + V+ + VPL+ + Sbjct: 27 ILKYFIVPVVWAAIIAYMTWPIYLRIQRFFGENRNNLNATVMISFVILVVGVPLICAIFI 86 Query: 85 GMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLK 142 E + L + G + VP ++ ++P G + + P S +++ Sbjct: 87 LQHEGRNLYLDLQRQVFSGHLSVPDFIKNLPFIGKEITRTLNDINTDPNSTIQSIAAWIQ 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ + + + F I++LFFFYRDG +I Q+ E + Sbjct: 147 SH-----LSYGRVLINEISKNLVKLGFAILSLFFFYRDGHTILTQVSKALEMVIGLRIHH 201 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + R+ G+ + AI + ++ G +Y++AGVP+ + L + T ++A+IP G P+S+ Sbjct: 202 YLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLTIATFLLALIPFGTPVSY 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V ++L +G A + LWG + + D +RP ++ G ++PFL FG++GG+ + Sbjct: 262 LGVGLWLFSQGQTMEAIGVVLWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIAS 321 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL+GLFIGPV++A++ IW+E + + + Sbjct: 322 FGLVGLFIGPVILAVLLAIWREWLHETIDPE 352 >gi|330811059|ref|YP_004355521.1| hypothetical protein PSEBR_a4112 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379167|gb|AEA70517.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 345 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 86/326 (26%), Positives = 153/326 (46%), Gaps = 7/326 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ + F++ + ++ F SWP+ + A + TV M L VPL++L Sbjct: 19 ASLWVMAPFWSALFWGAVLAFASWPLMRLLTRWVNGRESLAAALLTVGWMLLVAVPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + + A G+P P WL+ +P G +W +L + + Sbjct: 79 GFNLADHVRDATAFIKDAQVDGLPEAPTWLAGVPLVGERLVGIWNSIDQQGAALMVSARP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSI+F +FFFYRDG ++ + L E L Sbjct: 139 YLGQVGNWLLARSA-QIGGGILELTLSIVF----VFFFYRDGPRLAVFVHGLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +V ++ G+ A + ++ + +AGVP + LG++T ++++IP G P Sbjct: 194 AGYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVLGIVTFLLSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 + G +GLFIGP L+A+ + + Sbjct: 314 LIAFGFIGLFIGPTLLAVAYSLLTDW 339 >gi|227114498|ref|ZP_03828154.1| hypothetical protein PcarbP_16133 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 389 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 153/351 (43%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+FI+ ++ + L +++ +L A ++ P+ S K + + +++ + + Sbjct: 12 ILILFIVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGVASLLTVLIIFL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L +PL + ++E+ + +++ +N Q + + + +P WA +H Sbjct: 72 LVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELIQHLP--RWARHFLAEHNLDNA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G ++ G + + M+ LFF +DG + + Sbjct: 130 AKIQQELSQVVLKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGAYLVNLILE- 188 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++AI +G + G A+ +AG+ + G + A + Sbjct: 189 SLPLSTHVKHHLLVKFAAVSRATVKGTVVVAIVQGTLGGIAFSIAGIEGSLLWGSLMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +I+L ++ A + + + + +VD LRP LVG K+P Sbjct: 249 SLIPAVGSAIIWVPAAIFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S +EN E I +F Sbjct: 309 LILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 359 >gi|76818196|ref|YP_336095.1| PerM family permease [Burkholderia pseudomallei 1710b] gi|76582669|gb|ABA52143.1| Predicted permease PerM family [Burkholderia pseudomallei 1710b] Length = 374 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 137/353 (38%), Gaps = 3/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L FF + I+ P+ ++ + Sbjct: 24 DSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLA 83 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ + + L Sbjct: 84 ALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVL 143 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 144 HNYGLTDIAGIQKKLTD-GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 202 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +A +G + G +W+ G+ + Sbjct: 203 EIGRRVRRALP-LDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 261 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + Y + G I+ L + + +VD LRP LV Sbjct: 262 LWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILV 321 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G K+P +GG+ G+ G IGP++ AL W + + E Sbjct: 322 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE 374 >gi|304395632|ref|ZP_07377515.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304356926|gb|EFM21290.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 412 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 144/351 (41%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ I V+ + L +F+ +L A I+ P+ + ++ + + A+I + + Sbjct: 12 ILILAIATVAFFDVLSPYFSSILWAAILAVIFHPLKTWLRNRLGDRNGVAALITLLCICL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL + ++E + K+ ++Q + L +P WA ++ Sbjct: 72 IVFTPLAIIASSLVVETNAVYHKLQTNSSQFPVVFADLLQHLP--RWAKHFLAENNLDNA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + G ++ A G + + M+ LFF +DG + + Sbjct: 130 GQIQQKLSSFALKGGQYVAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLILEA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++ I +G++ G A+W G+ + G + A + Sbjct: 190 LP-LSTYVKHHLMVKFAAVARATVKGTVVVGIVQGILGGLAFWFTGIDGSLLWGALMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 249 SLIPAVGSAIIWVPAAIFFFATGALWKGLFLVGFFVVIVGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 +GG+ G+ G IGPV+ AL W S +EN E I F Sbjct: 309 MILIATLGGMEIYGINGFVIGPVIAALFIACWNLLSGRDNRENIEAIDEEF 359 >gi|261823604|ref|YP_003261710.1| hypothetical protein Pecwa_4411 [Pectobacterium wasabiae WPP163] gi|261607617|gb|ACX90103.1| protein of unknown function UPF0118 [Pectobacterium wasabiae WPP163] Length = 389 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 151/355 (42%), Gaps = 6/355 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ +L A ++ P+ S K + + +++ + Sbjct: 8 KGFFILILFAVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGIASLLTVL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +PL + ++E+ + +++ +N Q + + L +P WA T+H Sbjct: 68 IIFLIVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELLQHLP--KWARHFLTEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ G + + M+ LFF +DG + Sbjct: 126 LDNAAKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGSYLVNL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + V R+T G ++AI +G + G A+ +AG+ + G + Sbjct: 186 ILE-SLPLSTHVKHHLLVKFAAVSRATVKGTAVVAIVQGTLGGIAFSIAGIEGSLLWGSL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +++L ++ A + + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W S +EN E I +F Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 359 >gi|114327071|ref|YP_744228.1| hypothetical protein GbCGDNIH1_0407 [Granulibacter bethesdensis CGDNIH1] gi|114315245|gb|ABI61305.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 391 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 5/349 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-SKKEESSTFLAVIA 66 + + + I +L+ L F + A + +WP+Y + L ++ Sbjct: 39 QKIAFCVLALIITAGALWTLGSFMPALAWAAVFAIATWPLYRRARNAWPGGGRVLLPLLF 98 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV+V LF+ PL + + ++ V +G+PVP LS +P G E W + Sbjct: 99 TVAVTLLFLGPLTLAGIEVANDARGVIDGVEHVLHNGLPVPSALSSLPFGSPVVEWWQDN 158 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + L+ ++ + + + + FM++ LFF YRDG +++ Sbjct: 159 LGSGEGAARLARHIDRSQ----LVAISRHLSAVLAHRVVLFSFMLVTLFFLYRDGDTLTA 214 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 QL F + ++ R V I T G+ ++ + EG+++G Y +AGVP G Sbjct: 215 QLSRASARAFGPHGARVGRQVIASIHGTVDGLVLVGLAEGILIGIGYAIAGVPHPTLFGA 274 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +TAI AMIP GAP +F ++ L G + +A + +G + +FI D +RPFL+GG + Sbjct: 275 VTAIAAMIPFGAPAAFLLAALLLAANGALLSAAIIAGYGCLIVFIADHFVRPFLIGGATR 334 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LPF+ G++GGV GL GLF+GP LMA + +W+E A +N+++ Sbjct: 335 LPFILVLLGILGGVECWGLFGLFLGPALMAAVTHLWREFSAAGPDNRDR 383 >gi|170722651|ref|YP_001750339.1| hypothetical protein PputW619_3487 [Pseudomonas putida W619] gi|169760654|gb|ACA73970.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 354 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 152/336 (45%), Gaps = 7/336 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L+ + F + +L I+ F SWP+ T A + T + + + +PL++L Sbjct: 23 AALWVMAPFISALLWGAILAFASWPLMRLLTRALGGRETLAAGLLTSAWILIVALPLVWL 82 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + V G+P P WL IP G W +L + Sbjct: 83 GFNLADHVRDATAFVRDVQVDGLPDAPAWLGGIPLVGERLVSGWQSLDQQGAALIASVKP 142 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LS++F +FFFYRDG ++ + L L Sbjct: 143 HLGQVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGPRLAAFVLRLLNRLVGER 197 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AGVP + LG++T ++++IP G P Sbjct: 198 AEYYLELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPP 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 +++ + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 258 LAWIPATAWLVWQGEYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GLFIGP L+A+ + + + + Sbjct: 318 LIAFGFIGLFIGPTLLAVGYSLLLDWSRNAGQPTPQ 353 >gi|148654006|ref|YP_001281099.1| hypothetical protein PsycPRwf_2209 [Psychrobacter sp. PRwf-1] gi|148573090|gb|ABQ95149.1| protein of unknown function UPF0118 [Psychrobacter sp. PRwf-1] Length = 409 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 89/349 (25%), Positives = 178/349 (51%), Gaps = 7/349 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ++ + + +++ + ++ ++ F P L A I+ + ++PIY+ F K + S A Sbjct: 9 LVTQRVLTATLLVILFILCFRVVQFFIVPALWAAILAYVTFPIYNFFHKKVKLSPNISAG 68 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASEL 122 I TVS+ + VP++ + E L S ++ + G + VP+ + ++P G ++ Sbjct: 69 IMTVSISLMLGVPIVLGLFVLQQEAVNLYSNLLYRIKVGYVDVPQEIKNLPVIGQQIKDI 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + P++ +L+++ + + A + + ++ +FFFYRDG Sbjct: 129 LWEINKDPEASLSAFRAWLQSHL--YYGKVALDVAFSTM---AKLGMALMTIFFFYRDGI 183 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +Q+ ++ V ++ G+ + A+ + L+ G Y+ AG PS + Sbjct: 184 SLIKQIRQALRNIIGNRIDDYLDSVGSTTQAVVYGIGLTALAQALLAGVGYYFAGAPSPI 243 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T ++A++P G P ++ VSI+LL +G+ A L LWG + + VD +RP ++ Sbjct: 244 LLTLMTFVVALVPFGTPFAWMGVSIWLLTQGHTPEAIGLALWGMLVISWVDNLIRPIVIS 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I + Sbjct: 304 GATKIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIALAVWREWINQHRN 352 >gi|206563261|ref|YP_002234024.1| hypothetical protein BCAM1409 [Burkholderia cenocepacia J2315] gi|198039301|emb|CAR55266.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 356 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F + T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRDRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P +S +P G +E W +L HP + + T + Sbjct: 95 TQAIAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG L FM++ LF R G +S L F Sbjct: 151 HGVNSEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|50086276|ref|YP_047786.1| hypothetical protein ACIAD3289 [Acinetobacter sp. ADP1] gi|49532252|emb|CAG69964.1| conserved hypothetical protein; putative membrane protein [Acinetobacter sp. ADP1] Length = 370 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 84/336 (25%), Positives = 169/336 (50%), Gaps = 8/336 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 K F PV+ A II + +WPIY A + ++ + +PL F + Sbjct: 29 KYFIVPVVWAAIIAYMTWPIYIGIQRFCGENRPNLSATLMISLIILVIGIPLTFAVFMLQ 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTN 144 E + L ++ G + P ++ ++P G + + + ++P +L +++++ Sbjct: 89 HEGRNLFIELQQQIFSGHLSAPDFIRELPLVGNEITRILNEINTNPSNLTQNLSLWIQSH 148 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + F +++LFFFYRDG +I Q+ E + Sbjct: 149 -----MGYGRFVLSEISKNLVKLCFALLSLFFFYRDGHTILNQVSKALEMVIGPRIHHYM 203 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + R+ G+ + A+ + ++ G +Y++AGVP+ + L ++T ++A+IP G P+++T+ Sbjct: 204 DTISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNPMVLTIVTFLLALIPFGTPLAYTS 263 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+++L +G + A + LWG + D +RP ++ G ++PFL FG++GG+ + G Sbjct: 264 VALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVISGATQIPFLLIMFGVLGGLASFG 323 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+GLFIGPV++A++ IW+E + E + + Sbjct: 324 LVGLFIGPVILAILLAIWREWLHENIEPEPVPKATL 359 >gi|238757756|ref|ZP_04618939.1| hypothetical protein yaldo0001_35130 [Yersinia aldovae ATCC 35236] gi|238703999|gb|EEP96533.1| hypothetical protein yaldo0001_35130 [Yersinia aldovae ATCC 35236] Length = 367 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 72/358 (20%), Positives = 143/358 (39%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R T L IM +I+ S + ++ F A ++ +WP+ F Sbjct: 7 RRTDLPKLMFGVIFIMIMIVSSFWVVQPFIMGFAWAGMVVIATWPLLIRFEKLLWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A++ T+ ++ LF++P+ L + +++ ++ P WL IP G Sbjct: 67 AAIVMTMLLILLFVIPIALLVSSLVENSGPVIAWASSPSKLHFPEMNWLQSIPMIGSKLY 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W ++ + + ++ A+ G + L ++F + F Sbjct: 127 SSWHTLVAGGGNALLAKVQPYVGATATWLVAQAAHVGYFVIHLALMVLFSTLLYF----H 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 183 GEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ I + G + I+L G+ T L +W I + +D LRP+L Sbjct: 243 ATLLTVLMFICCVAQLGPLLILVPAVIWLYWTGDTTWGTVLLVWSCI-VGTMDNVLRPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +P + G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 302 IRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESIKD 359 >gi|26988931|ref|NP_744356.1| hypothetical protein PP_2207 [Pseudomonas putida KT2440] gi|24983744|gb|AAN67820.1|AE016413_2 membrane protein, putative [Pseudomonas putida KT2440] Length = 354 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 151/343 (44%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + + ++ + + + L ++ + A+I+G P+ + + Sbjct: 1 MNETALQNKALA-VLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +T+ + + I+P++ + + E L ++ D+ Sbjct: 60 LAAATSTLVCLLVAILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQR 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G + A FG ++ +S M+ LFFF RD Sbjct: 120 GLDNMGMGNLDGLRDKITKW-ATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ + L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GPEVARRVR-MAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA I + V+ Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG ++P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSW 340 >gi|297183286|gb|ADI19424.1| predicted permease [uncultured Pseudomonadales bacterium HF0500_12O04] Length = 349 Score = 228 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 163/350 (46%), Gaps = 7/350 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + SL+ + F++ + ++ F SWP+ + A Sbjct: 2 LNNDRLLVQILLLVLFGASLWVMAPFWSALFWGAVLAFASWPLMRLLTRVLGGRESLAAS 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASEL 122 I T+ M L PL++L +++ + V G+P P WL+ +P G + Sbjct: 62 ILTLGWMLLVAGPLVWLGLNLADHVRDATTFVKDVQLEGLPEAPAWLAGLPLVGERLVGI 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W ++ + + +L G + R A + G L+ LSI+F +FFFYRDG Sbjct: 122 WNTIDEQGAAMLVAIKPYLGQVGNWLLARSA-QIGSGILELTLSIVF----VFFFYRDGP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L E L +V ++ G+ A + L+ + +AGVP + Sbjct: 177 RLATFVHGLLERLIGERADYYQELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGAL 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG+ T ++++IP G P+ + + +L KG+ A L +WG + + VD L+P+L+ Sbjct: 237 VLGLATFLLSLIPMGPPLIWVPATAWLAWKGDYGMAIFLGIWGTLIISGVDNVLKPYLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 297 RGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAIAYSLLVDWSASQQNR 346 >gi|254253952|ref|ZP_04947269.1| hypothetical protein BDAG_03238 [Burkholderia dolosa AUO158] gi|124898597|gb|EAY70440.1| hypothetical protein BDAG_03238 [Burkholderia dolosa AUO158] Length = 356 Score = 228 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 8/346 (2%) Query: 6 LNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFL 62 Q I R M+ +L++L+ ++ F + A +I WP+ F S + T + Sbjct: 15 PRAQQIARAMLYTAFLLLALWVIRDFIPAIAWACVISIAMWPLLERFESHPLFRDRPTLI 74 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASE 121 A + T + L I+P+ F + + ++ + +GIP+P + +P G +E Sbjct: 75 ATVITTGISLLVILPVAAGFTEAVAQAHDVRMWLHTIQDNGIPLPDVVGRLPYGAAQITE 134 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +L HP + + T + + F +FG L FM++ LF R G Sbjct: 135 WWQANLGHP----LHAATAMHGVNGEKFIAFGRQFGTKLAHALLEFGFMLVTLFVILRAG 190 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F A ++ + + T G+ ++ +GEG +LG AY AGVP Sbjct: 191 HKLSGALLHGARRAFGASGAELIDRMVDAVYGTVTGLVVVGLGEGALLGVAYAFAGVPHA 250 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++TA+ AM+P API F +++L + G +A + +G + +F+ + +RP L+ Sbjct: 251 ALLGLVTAVAAMLPFCAPIVFCGAALWLFVHGATVSAVGVAAFGFVVVFVAEHFVRPVLI 310 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 GG +LPFL FG++GG T GL+GLF+GP LM ++ ++W E + Sbjct: 311 GGSTRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|254248509|ref|ZP_04941829.1| hypothetical protein BCPG_03340 [Burkholderia cenocepacia PC184] gi|124875010|gb|EAY65000.1| hypothetical protein BCPG_03340 [Burkholderia cenocepacia PC184] Length = 356 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 95/326 (29%), Positives = 158/326 (48%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T S+ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRNRPTLIATVITTSISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + +L + +GIP+P +S +P G +E W +L HP + + T + Sbjct: 95 TQAFAQAHDLREWLHTIQDNGIPLPDVVSRLPYGAAQITEWWQANLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG L FM++ LF R G +S L F Sbjct: 151 HGVNGEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|53722867|ref|YP_111852.1| hypothetical protein BPSS1848 [Burkholderia pseudomallei K96243] gi|52213281|emb|CAH39324.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 364 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 137/353 (38%), Gaps = 3/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L FF + I+ P+ ++ + Sbjct: 14 DSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLA 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ + + L Sbjct: 74 ALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVL 133 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 134 HNYGLTDIAGIQKKLTD-GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 192 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +A +G + G +W+ G+ + Sbjct: 193 EIGRRVRRALP-LDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 251 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + Y + G I+ L + + +VD LRP LV Sbjct: 252 LWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILV 311 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G K+P +GG+ G+ G IGP++ AL W + + E Sbjct: 312 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE 364 >gi|148548739|ref|YP_001268841.1| hypothetical protein Pput_3531 [Pseudomonas putida F1] gi|148512797|gb|ABQ79657.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 354 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 150/343 (43%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + + ++ + + + L ++ + A+I+G P+ + + Sbjct: 1 MNETALQNKALA-VLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +T+ + + I+P++ + E L ++ D+ Sbjct: 60 LAAATSTLVCLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQR 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G + A FG ++ +S M+ LFFF RD Sbjct: 120 GLDNMGMGNLDGLRDKIAKW-ATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ + L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GPEVARRV-RMAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA I + V+ Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILPGVVLTAFGVLVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG ++P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSW 340 >gi|49086714|gb|AAT51373.1| PA2651 [synthetic construct] Length = 353 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 136/331 (41%), Gaps = 5/331 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F+ V I+ P+ + + A+I + + + I+P++F+ Sbjct: 24 WLLLPFYGAVFWGTILAIIFAPVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIAGS 83 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E + +V + + ++ +P + + S + + Sbjct: 84 LVQEGASVYQRVKSGELNFAAYLQQAVAALPPS--VHQWLERFDLANLSSLQEKLSSVAM 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + A G LD+ +S M+ LFF RDG + +++ L + + Sbjct: 142 QASQVVATKAFSIGQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHHL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 VIR+T G +A +G + G +WL G+ + G + A ++++P GA + + Sbjct: 201 FAKFTTVIRATVKGNIAVAATQGALGGLIFWLPGIEGALLWGTLMAFLSLLPAIGAALIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 261 APVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMAL 320 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W +E + Sbjct: 321 FGLNGFVIGPLIAALFMASWDLFTGREEEPQ 351 >gi|116050638|ref|YP_790543.1| hypothetical protein PA14_29820 [Pseudomonas aeruginosa UCBPP-PA14] gi|296388888|ref|ZP_06878363.1| hypothetical protein PaerPAb_12095 [Pseudomonas aeruginosa PAb1] gi|313107690|ref|ZP_07793872.1| putative exported protein [Pseudomonas aeruginosa 39016] gi|115585859|gb|ABJ11874.1| putative exported protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310880374|gb|EFQ38968.1| putative exported protein [Pseudomonas aeruginosa 39016] Length = 352 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 136/331 (41%), Gaps = 5/331 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F+ V I+ P+ + + A+I + + + I+P++F+ Sbjct: 24 WLLLPFYGAVFWGTILAIIFAPVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIAGS 83 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E + +V + + ++ +P + + S + + Sbjct: 84 LVQEGASVYQRVKSGELNFAAYLQQAVAALPPS--VHQWLERFDLANLSSLQEKLSSVAM 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + A G LD+ +S M+ LFF RDG + +++ L + + Sbjct: 142 QASQVVATKAFSIGQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHHL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 VIR+T G +A +G + G +W+ G+ + G + A ++++P GA + + Sbjct: 201 FAKFTTVIRATVKGNIAVAATQGALGGLIFWVLGIEGALLWGTLMAFLSLLPAIGAALIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 261 APVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMAL 320 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W +E + Sbjct: 321 FGLNGFVIGPLIAALFMASWDLFTGREEEPQ 351 >gi|237749388|ref|ZP_04579868.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380750|gb|EEO30841.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 367 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 142/335 (42%), Gaps = 4/335 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + ++ + L L F+ + ++ P+ F+ K A++ Sbjct: 9 KVFLFFLLIVTLAFFSILLPFYGGIFWGFVLAILFMPLNDFFLRKMPAKKNLAALLTLAI 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + I+PL+ + + E L K+ ++S +P WA ++ Sbjct: 69 CLLIVIIPLIVVAGSLVEESSVLYQKILNQKIDSDASFHHFISQLP--DWAVDVLNHFGI 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T L ++ G LD+ + M+ LFF RDG ++ ++ Sbjct: 127 STFAELQKEATRLILVTGQYLGSRVFIIGQNVLDFTVGFFVMLYLLFFLLRDGHDLADKI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S L ++ VIR+T G ++A+ +G + G +W G+ + + G I Sbjct: 187 RSKIP-LADNQKTRLLTKFMGVIRATVKGNLVVALVQGGLGGLIFWFLGIEAALLWGAIM 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++++P G+ + + V+IY L+ G+I L +G + + ++D LRP LVG ++P Sbjct: 246 SVLSLLPAGSGVVWAPVAIYFLLTGSILKGVILLAFGILVIGLIDNFLRPLLVGKDTQMP 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ GL G IGP++ AL W Sbjct: 306 DYLVLISTIGGMALFGLNGFIIGPMIAALFLTAWD 340 >gi|330821282|ref|YP_004350144.1| hypothetical protein bgla_2g21980 [Burkholderia gladioli BSR3] gi|327373277|gb|AEA64632.1| hypothetical protein bgla_2g21980 [Burkholderia gladioli BSR3] Length = 350 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 140/350 (40%), Gaps = 3/350 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ + Q ++ + + + L FF + I+ P+ F + + Sbjct: 2 ESGKDHQKFFHLLLAIVTIGFCWILLPFFGAIFWGTILAILFQPVQRWFAAHFGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ A + + + L Sbjct: 62 ALVTLSLIVLIVILPLSFVAGTLVQEIAFAYQQIKAAQPNMTGWLQEIVHALPASLQRIL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 122 HSYGLTDIAGIQKKLTD-GAAAISQFVAAQAFSIGQNTFQFIVSFGIMLYLVFFLLRDGG 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +AI +G + G +W+ G+ + Sbjct: 181 EIGRRVRRALP-LDEDHKQLLLTKFTTVVRATVKGNIAVAIVQGALGGLIFWILGIEGVL 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + ++Y + G I+ L + + +VD LRP LV Sbjct: 240 LWGALMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G K+P +GG+ G+ G IGP++ AL W A + Sbjct: 300 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQN 349 >gi|83718340|ref|YP_438729.1| hypothetical protein BTH_II0529 [Burkholderia thailandensis E264] gi|167577075|ref|ZP_02369949.1| hypothetical protein BthaT_02997 [Burkholderia thailandensis TXDOH] gi|167615244|ref|ZP_02383879.1| hypothetical protein BthaB_03087 [Burkholderia thailandensis Bt4] gi|257141807|ref|ZP_05590069.1| hypothetical protein BthaA_21719 [Burkholderia thailandensis E264] gi|83652165|gb|ABC36229.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 352 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 137/353 (38%), Gaps = 3/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L FF + I+ P+ ++ + Sbjct: 2 DSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARLGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ + + L Sbjct: 62 ALVTLTLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPTSVHRVL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 122 HNYGLTDIAGIQKKLTD-GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +A +G + G +W+ G+ + Sbjct: 181 EIGRRVRRALP-LDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + Y + G ++ L + + +VD LRP LV Sbjct: 240 LWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQVWKCVILVAFCVGVIGLVDNLLRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G K+P +GG+ G+ G IGP++ AL W + + E Sbjct: 300 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE 352 >gi|121603896|ref|YP_981225.1| hypothetical protein Pnap_0987 [Polaromonas naphthalenivorans CJ2] gi|120592865|gb|ABM36304.1| protein of unknown function UPF0118 [Polaromonas naphthalenivorans CJ2] Length = 394 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 5/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + L ++ V I PI+ F+SK + T A+ ++ L I+P+ + Sbjct: 58 AFFWVLWPYYGAVFWGAIFALMFSPIFLRFMSKLSQRRTLSALFTVSIILVLVILPVGLI 117 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 E + +V + G + +P W + L + + L + Sbjct: 118 SALLTQEAAGVYQRVQSGDLSFGRYFQQIYDALPA--WITSLLNRSGLNNLGLIQERVSD 175 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T G FI A G D+ +S M+ +FFF RDG ++S+++ L Sbjct: 176 SLTKGSQFIATQALNIGQNAFDFFVSFFIMLYLMFFFLRDGAALSRRIKQAIP-LEEDIK 234 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 + + VIR+T G +A+ +G + G +W + + V G + A ++++P GA Sbjct: 235 RNLFSKFTTVIRATVRGNIAVAVMQGALGGLIFWFLNIHAPVLWGTLMAFLSLLPAVGAA 294 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+IY L G I+ L +G + + +VD LRP LVG K+P +GG Sbjct: 295 LVWIPVAIYFLATGAIWQGVVLIAFGVLVIGLVDNVLRPVLVGKDTKMPDYVVLVSTIGG 354 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GL G IGPV+ A+ W A ++ Sbjct: 355 MSLFGLNGFVIGPVIAAMFMAAWDIFSKARQDAP 388 >gi|107026899|ref|YP_624410.1| hypothetical protein Bcen_4556 [Burkholderia cenocepacia AU 1054] gi|105896273|gb|ABF79437.1| protein of unknown function UPF0118 [Burkholderia cenocepacia AU 1054] Length = 398 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 143/350 (40%), Gaps = 5/350 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L F V I+ P+ ++ + Sbjct: 50 DSGQDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLA 109 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A++ ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 110 ALVTMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLL 169 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P K L++ F A G + +S M+ +FF RDG Sbjct: 170 QKYGLTNIPGIQKKLTDG--AAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDG 227 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 228 GEIGRRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGV 286 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + ++Y L+ G ++ L + + +VD LRP L Sbjct: 287 VLWGALMAFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPIL 346 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 347 VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 396 >gi|170735629|ref|YP_001776889.1| hypothetical protein Bcenmc03_3243 [Burkholderia cenocepacia MC0-3] gi|169817817|gb|ACA92399.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 356 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P +S +P G +E W +L HP + + T + Sbjct: 95 TQAIAQAHDLREWLHSIQDNGIPLPDVISRLPYGAAQITEWWQANLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG L FM++ LF R G +S L F Sbjct: 151 HGVNSEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|313499673|gb|ADR61039.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 354 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 149/343 (43%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + + ++ + + + L ++ + A+I+G P+ + + Sbjct: 1 MNETALQNKALA-VLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +T+ + + I+P++ + E L ++ D+ Sbjct: 60 LAAGTSTLVCLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQR 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G + A FG ++ +S M+ LFFF RD Sbjct: 120 GLDNMGMGNLDGLRDKITKW-ATQGSQALASQAFSFGQGTFEFLISFGIMMYLLFFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ + L +++ +V+R+T G ++AI +G + G +W +PS Sbjct: 179 GPEVARRV-RMAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA I + V+ Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG ++P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSW 340 >gi|51596641|ref|YP_070832.1| inner membrane protein [Yersinia pseudotuberculosis IP 32953] gi|149365682|ref|ZP_01887717.1| putative membrane protein [Yersinia pestis CA88-4125] gi|153950534|ref|YP_001400713.1| inner membrane protein [Yersinia pseudotuberculosis IP 31758] gi|161484817|ref|NP_669246.2| putative inner membrane protein [Yersinia pestis KIM 10] gi|161511367|ref|NP_993525.2| putative inner membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|162100171|ref|YP_651663.2| putative inner membrane protein [Yersinia pestis Antiqua] gi|162139438|ref|YP_647791.2| putative inner membrane protein [Yersinia pestis Nepal516] gi|165927526|ref|ZP_02223358.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939531|ref|ZP_02228077.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011791|ref|ZP_02232689.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210661|ref|ZP_02236696.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400956|ref|ZP_02306462.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422187|ref|ZP_02313940.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424857|ref|ZP_02316610.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469404|ref|ZP_02334108.1| putative inner membrane protein [Yersinia pestis FV-1] gi|170024083|ref|YP_001720588.1| hypothetical protein YPK_1844 [Yersinia pseudotuberculosis YPIII] gi|186895697|ref|YP_001872809.1| hypothetical protein YPTS_2391 [Yersinia pseudotuberculosis PB1/+] gi|218929498|ref|YP_002347373.1| putative inner membrane protein [Yersinia pestis CO92] gi|229837932|ref|ZP_04458091.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895092|ref|ZP_04510268.1| predicted inner membrane protein [Yersinia pestis Pestoides A] gi|229898493|ref|ZP_04513638.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902336|ref|ZP_04517456.1| predicted inner membrane protein [Yersinia pestis Nepal516] gi|270490484|ref|ZP_06207558.1| putative membrane protein [Yersinia pestis KIM D27] gi|294503589|ref|YP_003567651.1| hypothetical protein YPZ3_1479 [Yersinia pestis Z176003] gi|51589923|emb|CAH21555.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953] gi|115348109|emb|CAL21036.1| putative membrane protein [Yersinia pestis CO92] gi|149292095|gb|EDM42169.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152962029|gb|ABS49490.1| putative membrane protein [Yersinia pseudotuberculosis IP 31758] gi|165912580|gb|EDR31211.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920581|gb|EDR37858.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989256|gb|EDR41557.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207841|gb|EDR52321.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958999|gb|EDR56020.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049809|gb|EDR61217.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056044|gb|EDR65822.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750617|gb|ACA68135.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis YPIII] gi|186698723|gb|ACC89352.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis PB1/+] gi|229680671|gb|EEO76767.1| predicted inner membrane protein [Yersinia pestis Nepal516] gi|229688041|gb|EEO80112.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694298|gb|EEO84345.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701854|gb|EEO89877.1| predicted inner membrane protein [Yersinia pestis Pestoides A] gi|262361631|gb|ACY58352.1| hypothetical protein YPD4_1444 [Yersinia pestis D106004] gi|262365627|gb|ACY62184.1| hypothetical protein YPD8_1501 [Yersinia pestis D182038] gi|270338988|gb|EFA49765.1| putative membrane protein [Yersinia pestis KIM D27] gi|294354048|gb|ADE64389.1| hypothetical protein YPZ3_1479 [Yersinia pestis Z176003] gi|320015062|gb|ADV98633.1| putative inner membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 367 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 140/346 (40%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 19 IFIMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P W+ IP G W +S + Sbjct: 79 FVIPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGAN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F ++ Y G ++ + Sbjct: 139 ALMAKVQPYIGATATWFVAQAAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 195 MRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 255 VAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMILI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 314 LSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 359 >gi|15597847|ref|NP_251341.1| hypothetical protein PA2651 [Pseudomonas aeruginosa PAO1] gi|107102172|ref|ZP_01366090.1| hypothetical protein PaerPA_01003222 [Pseudomonas aeruginosa PACS2] gi|218891187|ref|YP_002440053.1| hypothetical protein PLES_24531 [Pseudomonas aeruginosa LESB58] gi|254235633|ref|ZP_04928956.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254241080|ref|ZP_04934402.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|9948721|gb|AAG06039.1|AE004694_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126167564|gb|EAZ53075.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126194458|gb|EAZ58521.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218771412|emb|CAW27179.1| putative exported protein [Pseudomonas aeruginosa LESB58] Length = 352 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 136/331 (41%), Gaps = 5/331 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F+ V I+ P+ + + A+I + + + I+P++F+ Sbjct: 24 WLLLPFYGAVFWGTILAIIFAPVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIAGS 83 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E + +V + + ++ +P + + S + + Sbjct: 84 LVQEGASVYQRVKSGELNFAAYLQQAVAALPPS--VHQWLERFDLANLSSLQEKLSSVAM 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + A G LD+ +S M+ LFF RDG + +++ L + + Sbjct: 142 QASQVVATKAFSIGQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHHL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 VIR+T G +A +G + G +WL G+ + G + A ++++P GA + + Sbjct: 201 FAKFTTVIRATVKGNIAVAATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 261 APVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMAL 320 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W +E + Sbjct: 321 FGLNGFVIGPLIAALFMASWDLFTGREEEPQ 351 >gi|26990854|ref|NP_746279.1| hypothetical protein PP_4162 [Pseudomonas putida KT2440] gi|24985865|gb|AAN69743.1|AE016611_1 membrane protein, putative [Pseudomonas putida KT2440] Length = 350 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 163/353 (46%), Gaps = 7/353 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ ++ L+ + F + +L I+ F SWP+ T A Sbjct: 2 VNNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASEL 122 + T++ + + +PL++L + +++ + V G+P P WL IP G Sbjct: 62 LLTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNG 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W +L + + G + R A + G L+ LS++F +FFFYRDG Sbjct: 122 WQSLDQKGAALLTSIKPYFGQVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L L + +V ++ G+ A + L+ + +AGVP + Sbjct: 177 RLAAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAI 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++T ++++IP G P+++ + +L+ KG A L +WG + VD L+P+L+ Sbjct: 237 VLGLVTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 297 RGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQ 349 >gi|161520866|ref|YP_001584293.1| hypothetical protein Bmul_4321 [Burkholderia multivorans ATCC 17616] gi|160344916|gb|ABX18001.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] Length = 380 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 59 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAMAL 118 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 119 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 174 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 175 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 234 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 235 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 294 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 295 FCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 354 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 T GL+GLF+GP LM ++ V+W E Sbjct: 355 TFGLIGLFVGPALMTVLTVLWAEW 378 >gi|313497990|gb|ADR59356.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 350 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 163/353 (46%), Gaps = 7/353 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ ++ L+ + F + +L I+ F SWP+ T A Sbjct: 2 VNNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASEL 122 + T++ + + +PL++L + +++ + V G+P P WL IP G Sbjct: 62 LLTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNG 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W +L + + G + R A + G L+ LS++F +FFFYRDG Sbjct: 122 WQSLDQQGAALLASIKPYFGQVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L L + +V ++ G+ A + L+ + +AGVP + Sbjct: 177 RLAAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAI 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++T ++++IP G P+++ + +L+ KG A L +WG + VD L+P+L+ Sbjct: 237 VLGLVTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 297 RGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQ 349 >gi|238791674|ref|ZP_04635311.1| hypothetical protein yinte0001_13870 [Yersinia intermedia ATCC 29909] gi|238728778|gb|EEQ20295.1| hypothetical protein yinte0001_13870 [Yersinia intermedia ATCC 29909] Length = 367 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 139/358 (38%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 7 RRFDLPKLMFGVIFIMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKLLWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 67 AVIVMTLLLILLFVIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQSIPMVGNKLY 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W ++ + I ++ A+ G + L ++F ++ F Sbjct: 127 SSWHTLVAGGGNAMIAKVQPYIGAAATWLVAQAAHVGYFLIHLALMVLFSVLLYF----H 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 183 GEQVGLGIRHFAVRAADKRGDGVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V+ I + G + I+L G+ T L +W I + +D LRP+L Sbjct: 243 ATLFTVLMFICCVAQLGPLLILVPAIIWLYWTGDTTWGTALLIWSCI-VGTMDNVLRPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +P + G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 302 IRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESIQE 359 >gi|116692369|ref|YP_837902.1| hypothetical protein Bcen2424_4274 [Burkholderia cenocepacia HI2424] gi|116650369|gb|ABK11009.1| protein of unknown function UPF0118 [Burkholderia cenocepacia HI2424] Length = 356 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + +L + +GIP+P +S +P G +E W +L HP + + T + Sbjct: 95 TQAFAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG L FM++ LF R G +S L F Sbjct: 151 HGVNGEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G I +F+ + +RP L+GG +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGGSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E I Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|148546943|ref|YP_001267045.1| hypothetical protein Pput_1705 [Pseudomonas putida F1] gi|148511001|gb|ABQ77861.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 349 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 164/353 (46%), Gaps = 7/353 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ ++ L+ + F + +L I+ F SWP+ T A Sbjct: 2 VNNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASEL 122 + T++ + + +PL++L + +++ + V G+P P WL IP G Sbjct: 62 LLTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNG 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W +L + + G + R A + G L+ LS++F +FFFYRDG Sbjct: 122 WQSLDQQGAALLTSIKPYFGQVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L L + +V ++ G+ A + L+ + +AGVP + Sbjct: 177 RLAAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAI 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++T ++++IP G P+++ + +L+ KG A L +WG + VD L+P+L+ Sbjct: 237 VLGLVTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + ++ Sbjct: 297 RGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQPPQQ 349 >gi|319795203|ref|YP_004156843.1| hypothetical protein Varpa_4567 [Variovorax paradoxus EPS] gi|315597666|gb|ADU38732.1| protein of unknown function UPF0118 [Variovorax paradoxus EPS] Length = 377 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 3/336 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G+ ++ + + ++ L FF VL + + P+Y + K A+ Sbjct: 7 QRGVFIALLAAVTVAFVWVLLPFFGAVLWGVALAILFTPLYKWLLKKMRGKPNAAALATL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I+PL + + E+ + + + + + D S + +L Sbjct: 67 AICLFIVILPLAMVGVSLVQEIALVTQNIRSGQINFAAYFQQILDASPQWLLSLVERFNL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + T I A G D+ +S M+ L+F RDG ++S+ Sbjct: 127 GDMAAWQARISTAAG-QASQIIASQALAIGQNTFDFIVSFFVMLYLLYFLVRDGSTLSKT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + VIR+T G +AI +G + G A+W GV + V+ Sbjct: 186 MRDAVP-LAKPHTHYLLNKFTTVIRATVKGNVAVAIAQGTIGGLAFWFLGVQGALLWAVL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P GA + + V+IY L G+ + L G + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGVLIFVGVFVIGLVDNILRPVLVGKDTQ 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +P +GG+ G+ G IGPV+ AL W Sbjct: 305 MPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAW 340 >gi|331000798|ref|ZP_08324444.1| hypothetical protein HMPREF9439_02096 [Parasutterella excrementihominis YIT 11859] gi|329570326|gb|EGG52059.1| hypothetical protein HMPREF9439_02096 [Parasutterella excrementihominis YIT 11859] Length = 402 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 6/330 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + + F + A +I SWP++ + + +I + L ++P Sbjct: 21 FIAIGCFLVVWPFATAMSVAAVIAIVSWPLFKRVRKEVGGRNLVATLIMVSLLAILIVLP 80 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + L E+ L+ V G VP L +IP G WA L + + L + Sbjct: 81 IAGLSLVSAQEIPTLIRYVREWIASGFTVPEELKEIPFVGEWAYTQAAHLLGNKEELAAI 140 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ D + R A ++ D L + M+ +FFFYRDG +SQ+ +L + Sbjct: 141 AQKLF-----DPVSRAALAGAVMLGDGLLQLFLMLFVIFFFYRDGEVLSQKSLALLTRMS 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ I+ RS G+ A G+G+V +W+AGVP + LGV +++ +P Sbjct: 196 GSIGAEVRDIIVNTTRSVVFGIVGSAAGQGVVALIGFWIAGVPGAITLGVAVFVLSAVPI 255 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G P+ + + +L KG + A L LWG++ + VD L+P L+ LP + G+ Sbjct: 256 GPPLVWGPAAFWLYYKGEVGMAIFLVLWGSLAVSSVDNFLKPILISKGASLPLSLIYLGV 315 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 GGV G +G+ +GPV++A+ + K + Sbjct: 316 FGGVLAFGFMGIILGPVVIAVGIAMSKTWL 345 >gi|329894051|ref|ZP_08270036.1| putative permease PerM family [gamma proteobacterium IMCC3088] gi|328923223|gb|EGG30543.1| putative permease PerM family [gamma proteobacterium IMCC3088] Length = 378 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 82/352 (23%), Positives = 147/352 (41%), Gaps = 8/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 RE + +R I +I VS+ Y + FF+ +L A II P+++ + + Sbjct: 6 REPDMQKVIEIRSFIAALIAVSIAFTYLMLPFFSVILWACIIALLFHPLHAKLLDRYPRH 65 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A++ ++ + + + P LFL + + + ++ + W+ I Sbjct: 66 ENIAALVTLLACVLIAVTPALFLASSFIKQGTAIYQQLESGQ---LKPALWIDQIRQAFP 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + L + L + A G L + +S+ M+ FF Sbjct: 123 VIDELLRTLGFDVAEVKQQLGSLSVEAGKVMASNALLIGQNTLGWLVSLGLMLYLTFFML 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG + L L + + + +V R+T G ++A+ +G + G +WL + Sbjct: 183 RDGARLIPILIRALP-LGDERERLLMQKFAEVTRATIKGSLVVAMAQGSLGGLIFWLLDL 241 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P V GV+ ++++IP GA + + V +YLL GN + L +GAI + +VD LR Sbjct: 242 PGPVLWGVVMTVLSLIPVVGASLIWLPVGLYLLATGNTSDGIILIAFGAIVIGLVDNILR 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P LVG KLP +GG G+ G +GP++ L W+ Sbjct: 302 PILVGRDTKLPDYLVLLSTLGGFTMFGMTGFVLGPLIAVLFITFWEIFSREF 353 >gi|310815720|ref|YP_003963684.1| hypothetical protein EIO_1241 [Ketogulonicigenium vulgare Y25] gi|308754455|gb|ADO42384.1| putative membrane protein [Ketogulonicigenium vulgare Y25] Length = 374 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 142/333 (42%), Gaps = 3/333 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 M++ + + ++ + F+ VL A+I+ P++ + + A +T++ +C+ Sbjct: 13 VMLIIVTIAFVWLMLPFYGAVLWAIILAILFNPLHRRLVRGLGGRRSLAAAFSTLACICI 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P + E L ++V + I + + L +LS + Sbjct: 73 VVIPGSMVLAALAREAGSLYARVSAPDFDAISILERVHAGMPSYLVEALSAFNLSEFDQI 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + FL + + A G + + M+ LFF +RDG ++ + Sbjct: 133 QTRLTGFLG-DAAQTVATGALNIGQSTAQLVIGLGVMLYVLFFMFRDGSQLA-IIIRRAS 190 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + R V++ T G IIA+ +G + G + L G+ + GV+ A++++ Sbjct: 191 PLTDYQTEHVLRKFTTVVKYTVRGNVIIAVIQGAIGGITFLLLGIEAAFLWGVLMAVLSL 250 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + ++ + YL + G + L G + + +D LRP LVG KLP Sbjct: 251 LPAVGAFLVWSPAAAYLFLSGQVIQGFILVAVGVVIISTIDNILRPPLVGQGTKLPDYMV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ G+ G IGP++ AL +W Sbjct: 311 LVSTLGGLALFGVNGFVIGPLIAALFVALWSLY 343 >gi|238796346|ref|ZP_04639855.1| hypothetical protein ymoll0001_21740 [Yersinia mollaretii ATCC 43969] gi|238719791|gb|EEQ11598.1| hypothetical protein ymoll0001_21740 [Yersinia mollaretii ATCC 43969] Length = 367 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 135/346 (39%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I+ S + ++ F A ++ +WP+ I T+ ++ L Sbjct: 19 IFILIMIVASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKLLWGKRWLAVFIMTLLLILL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P WL +P G W ++ + Sbjct: 79 FVIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQSVPMVGDKLYNSWHTLIAGGGN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I ++ A+ G + L ++F ++ F G + + Sbjct: 139 AIIAKVQPYVGAAATWLVAQAAHVGYFLIHLALMVLFSVLLYF----HGEQVGLGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ V+ I Sbjct: 195 VRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLMFICC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + ++L G+ T L +W + +D LRP+L+ +P + Sbjct: 255 VAQLGPLLILVPAILWLYWTGDTTWGTVLLVWSC-VVGTMDNFLRPYLIRMEADMPMILI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 314 LSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVNEAPEPEESIKE 359 >gi|312960058|ref|ZP_07774571.1| hypothetical protein PFWH6_1962 [Pseudomonas fluorescens WH6] gi|311285715|gb|EFQ64283.1| hypothetical protein PFWH6_1962 [Pseudomonas fluorescens WH6] Length = 355 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 3/331 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ + + ++ + + + I+P++ Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPLQRRLQQRFGWNRNLTSLTTLMVCLVIAILPVIIT 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V + L L + + L+ Sbjct: 81 SALLVQEGATLYKNVESGKLDVAGYIEQFKHFLPPYFQHLLDRFGLGNLEGLREKIVK-S 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G F A FG D+ +S M+ LFF RDG + +++ + L + Sbjct: 140 AMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVRTAVP-LAEPQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W +P+ + V+ A ++++P GA I Sbjct: 199 RLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPNALLWAVLMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+ Y L+ G+I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAAYFLLSGSIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGL 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL G IGP++ AL W + + Sbjct: 319 SVFGLNGFVIGPLVAALFMSSWALFVESKPR 349 >gi|239833729|ref|ZP_04682057.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239821792|gb|EEQ93361.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 375 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 7/352 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + ++ + + + L +++ VL A+I+ P+ A Sbjct: 20 FMSVQRASFYILLALVTIAFAWLLLPYYSAVLWAVILAVVFSPVQQRLERLLGGRKNIAA 79 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASE 121 +++ + +CL I+P+L +F + E L ++ + ++S I G + E Sbjct: 80 LLSVLMCICLVIIPMLAIFGSLVQEGNSLYQRLSSRE---FDLNSYISRILGALPDSLEE 136 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T+ + + G FG L + + M+ LFF +RDG Sbjct: 137 WLTRFELGDFAEWRSRISSAIMQGSQLFAGRLVSFGQNTLQFFIGFGIMLYLLFFLFRDG 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +++ L Y ++ VIR+T G IIAI +G + G +WL GV + Sbjct: 197 AELGRKIRQ-AIPLNDDYTRQFLEKFTAVIRATVKGNIIIAIIQGTIGGVTFWLLGVEAA 255 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + GV+ ++M+P GA + + + + G + L G + +VD LRP L Sbjct: 256 LLWGVMMTFLSMLPAVGAALVWIPAAAWFFASGEWISGAVLIFVGVFVIGLVDNLLRPPL 315 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG ++P VGG+ +G+ G +GP++ A+ W K N Sbjct: 316 VGKGTRMPDYVVLISTVGGISLIGINGFVVGPLIAAMFIAAWSLLAEEQKGN 367 >gi|303257155|ref|ZP_07343169.1| putative membrane protein [Burkholderiales bacterium 1_1_47] gi|302860646|gb|EFL83723.1| putative membrane protein [Burkholderiales bacterium 1_1_47] Length = 402 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 6/330 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + + F + A +I SWP++ + + +I + L ++P Sbjct: 21 FIAIGCFLVVWPFATAMSVAAVIAIVSWPLFKRVRKEVGGRNLVATLIMVSLLAILIVLP 80 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + L E+ L+ V G VP L +IP G WA L + + L + Sbjct: 81 IAGLSLVSAQEIPTLIRYVREWIASGFTVPEELKEIPFVGEWAYTQAAHLLGNKEELAAI 140 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ D + R A ++ D L + M+ +FFFYRDG +SQ+ +L + Sbjct: 141 AQKLF-----DPVSRAALAGAVMLGDGLLQLFLMLFVIFFFYRDGEVLSQKSLALLTRMS 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ I+ RS G+ A G+G+V +W+AGVP + LGV +++ +P Sbjct: 196 GSIGAEVRDIIVNTTRSVVFGIVGSAAGQGVVALIGFWIAGVPGAITLGVAVFVLSAVPI 255 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G P+ + + +L KG + A L LWG++ + VD L+P L+ LP + G+ Sbjct: 256 GPPLVWGPAAFWLYYKGEVGMAIFLVLWGSLAVSSVDNFLKPILISKGASLPLSLIYLGV 315 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 GGV G +G+ +GPV++A+ + K + Sbjct: 316 FGGVLAFGFMGIILGPVVIAVGIAMSKTWL 345 >gi|332161640|ref|YP_004298217.1| putative inner membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605868|emb|CBY27366.1| putative membrane protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665870|gb|ADZ42514.1| putative inner membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861398|emb|CBX71629.1| UPF0118 inner membrane protein ydiK [Yersinia enterocolitica W22703] Length = 367 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 143/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 6 LRRFDLPKLMFGVIFIMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKILWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+I T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 66 LAAIIMTILLVLLFVIPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSIPMVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ ++ I ++ A+ G + L ++F I+ F Sbjct: 126 YSGWHSLIAGGGNVLIAKIQPYVGAAATWLVAQAAHIGYFLIHLALMVLFSILLYF---- 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 182 HGEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ I + G + I+L G+ T L +W I + +D LRP+ Sbjct: 242 YATLFTVLMFICCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCI-VGTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESITE 359 >gi|226953805|ref|ZP_03824269.1| protein of hypothetical function UPF0118 [Acinetobacter sp. ATCC 27244] gi|294651707|ref|ZP_06729009.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226835444|gb|EEH67827.1| protein of hypothetical function UPF0118 [Acinetobacter sp. ATCC 27244] gi|292822426|gb|EFF81327.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 93/350 (26%), Positives = 172/350 (49%), Gaps = 9/350 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVI 65 + ++ + ++ + LK F PVL A II + +WP+Y + T A I Sbjct: 10 QRVLLFGLFFVLMFLGFNILKYFIVPVLWAAIIAYMTWPVYLWVQRRFFGENRPTLNATI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELW 123 V+ + VP +F + LE + L + G I VP ++ ++P G S Sbjct: 70 MISLVILVIGVPFIFAIFLLQLEGRNLYMNLQKQLFSGHIQVPDFIRNLPVIGEDISHTI 129 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + P S+ +++++ + + + F ++ LFFFYRDG + Sbjct: 130 NELSGDPNSITRSIAEWIQSH-----LSYGRFVLSEISRNLVKLTFALMTLFFFYRDGQT 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I Q+ E + + + + R+ G+ + A+ + L+ G +Y++AGVP+ + Sbjct: 185 ILAQVSRALEMVIGPRVHHYLQTISETTRAVVYGIGLTAVAQALLAGLSYFVAGVPNPML 244 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++T I+A+IP G P+S+ V ++L +G A + WG + + D +RP ++ G Sbjct: 245 LTIVTFILALIPFGTPVSYLGVGLWLFAQGQTVEAIGVVTWGVLIVSSADNVIRPLVISG 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + Sbjct: 305 ATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHENVEQQ 354 >gi|167850688|ref|ZP_02476196.1| Predicted permease PerM family protein [Burkholderia pseudomallei B7210] Length = 352 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 137/353 (38%), Gaps = 3/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L FF + I+ P+ ++ + Sbjct: 2 DSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ + + L Sbjct: 62 ALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQSNMTQYFQEFMHALPSSVHRVL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 122 HNYGLTDIAGIQKKLTD-GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +A +G + G +W+ G+ + Sbjct: 181 EIGRRVRRALP-LDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + Y + G I+ L + + +VD LRP LV Sbjct: 240 LWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G K+P +GG+ G+ G IGP++ AL W + + E Sbjct: 300 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE 352 >gi|258542772|ref|YP_003188205.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633850|dbj|BAH99825.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636909|dbj|BAI02878.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639962|dbj|BAI05924.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256643018|dbj|BAI08973.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256646073|dbj|BAI12021.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256649126|dbj|BAI15067.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256652113|dbj|BAI18047.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655170|dbj|BAI21097.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 390 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 170/350 (48%), Gaps = 8/350 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SS 59 + + + + +FI+ V++Y ++GF + + +WP+Y+ +K S Sbjct: 40 QRSRRGQEMARTVLALFIVGVAVYTIQGFLPALAWGSVFAIATWPLYTRACNKWPHAASG 99 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T L ++ T ++ LF++PL + + E + + V A ++G+PVP + +P G A Sbjct: 100 TLLPLLFTAAMALLFVIPLTLVTLEAVGEAQSALEWVSHAREYGVPVPDAIHRLPFGSSA 159 Query: 120 -SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S+ W HLS P+ L + G F I+ LFF Y Sbjct: 160 ISKWWEAHLSDPRDLSGMLGNLDSKG-----VAVTRAVGSQVAHRATLFCFSILTLFFLY 214 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG S+ +Q + F + + R + I + G+ ++ IGEGL+LG Y A Sbjct: 215 KDGLSVIRQCRVVSCRAFGKRGESVGRQIVASIHGSVQGLVLVGIGEGLLLGVVYVFAHA 274 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P GVITA+ AMIP A I+ VS+ +L++G+ A F GA+ +F D +RP Sbjct: 275 PHPALFGVITAVAAMIPFCAMIAVGLVSLLILVQGSSVAAITTFCIGAVIIFTADHFIRP 334 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+GG KLPFL G++GG T GL+GLFIGP MA + ++W Sbjct: 335 ALIGGSTKLPFLWVLLGILGGAETWGLIGLFIGPAAMAALNLLWCRWAYG 384 >gi|134096432|ref|YP_001101507.1| hypothetical protein HEAR3279 [Herminiimonas arsenicoxydans] gi|133740335|emb|CAL63386.1| Conserved hypothetical protein, putative permease [Herminiimonas arsenicoxydans] Length = 369 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 88/355 (24%), Positives = 156/355 (43%), Gaps = 6/355 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +M P+ + + +I+ SL F L F+ V A ++ P Y + K + S Sbjct: 9 HSMNYPEIQQKTFLGLLIIFSLAFIGILLPFYGAVFWAAVLAILFSPFYRKLLIKMNQHS 68 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A+ + + I+PL+ + + E L + + + + Sbjct: 69 NLAALATLGMCLVVVIIPLVLISISLVHEASALYANIRSGQIDFGVFFQKVISALPSWVV 128 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S+L L+ SL+ G +FI + A G ++ +S M+ LFF R Sbjct: 129 SQLERFGLTDMTSLQAKLSNA-AVQGSEFITKQAISIGQNTFNFLVSFTIMLYILFFLLR 187 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I+ ++ L + + + + IR+T G I+A +G + G A+W GV Sbjct: 188 DGDRIATRIKQAAP-LNAEHKRLLFNNLTTAIRATVKGNIIVAAVQGALGGIAFWFLGVQ 246 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GV+ A ++++P GA + + V+IY L+ G ++ L +G + + +VD LRP Sbjct: 247 GALLWGVLMAFLSLLPAVGAALIWVPVAIYFLLTGAVWQGVTLIAFGVLVIGLVDNILRP 306 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG +LP VGG+ +GL G IGPV+ AL +W+ ++ + Sbjct: 307 MLVGKDTQLPDFVVLISTVGGMAWLGLNGFVIGPVIAALFISLWEIFSSGKQKQE 361 >gi|167566605|ref|ZP_02359521.1| Predicted permease PerM family protein [Burkholderia oklahomensis EO147] gi|167573685|ref|ZP_02366559.1| Predicted permease PerM family protein [Burkholderia oklahomensis C6786] Length = 352 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 139/349 (39%), Gaps = 3/349 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q ++ + + + L FF + I+ P+ ++ + Sbjct: 2 DSGNDHQKFFHLLLFVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ + ++ + + + L Sbjct: 62 ALVTLSLIILIVILPLAFVAGTLVQEITYVYQQIKTMQPNMTQYFQDIMHALPTSVHRVL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ S++ F+ A G + +S M+ +FF RDG Sbjct: 122 HNYGLTDIASIQKKLTD-GAAAISQFVATQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +A +G + G +W+ G+ + Sbjct: 181 EIGRRVRRALP-LAEDHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + YL + G I+ L + + +VD LRP LV Sbjct: 240 LWGALMAFLSLLPAIGAGLVWVPAAGYLAVTGQIWKCVILVAFCVGVIGLVDNLLRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G K+P +GG+ G+ G IGP++ AL W A + Sbjct: 300 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARAEQ 348 >gi|94309527|ref|YP_582737.1| hypothetical protein Rmet_0582 [Cupriavidus metallidurans CH34] gi|93353379|gb|ABF07468.1| conserved hypothetical protein; putative membrane protein [Cupriavidus metallidurans CH34] Length = 367 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 145/354 (40%), Gaps = 7/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ ++SW Y+ Sbjct: 1 MSSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A+I + + + P ++ + EL + V +HGIP +P WLS +P G Sbjct: 61 LAALICVLIATVIVLGPFVYAGASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQ 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W K ++ + G + G LSI+ FFFY Sbjct: 121 IESAWNKVITADSETVASLRKLIAPVGHALLGA-GLSIGAGLGQLALSIVLA----FFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + + + + ++ G+ A + ++ G +W+AGV Sbjct: 176 TGGELAVDWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG IT ++++P G P+++ +++L G A + +WGA + + D ++P Sbjct: 236 PGAAILGFITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ LP + G++GG G LG+FIGP ++A+ + ++ + +E Sbjct: 296 LLISKGTGLPLIWIMMGVLGGALAFGFLGVFIGPTVLAVAYALLRDWTIGNQER 349 >gi|53716720|ref|YP_105073.1| hypothetical protein BMAA0253 [Burkholderia mallei ATCC 23344] gi|67643155|ref|ZP_00441903.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121597560|ref|YP_991032.1| hypothetical protein BMASAVP1_1436 [Burkholderia mallei SAVP1] gi|124382408|ref|YP_001025433.1| hypothetical protein BMA10229_1633 [Burkholderia mallei NCTC 10229] gi|126442642|ref|YP_001063635.1| hypothetical protein BURPS668_A2642 [Burkholderia pseudomallei 668] gi|126446184|ref|YP_001077494.1| hypothetical protein BMA10247_A0289 [Burkholderia mallei NCTC 10247] gi|126456863|ref|YP_001076534.1| hypothetical protein BURPS1106A_A2503 [Burkholderia pseudomallei 1106a] gi|134278524|ref|ZP_01765238.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167002310|ref|ZP_02268100.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167724720|ref|ZP_02407956.1| Predicted permease PerM family protein [Burkholderia pseudomallei DM98] gi|167743670|ref|ZP_02416444.1| Predicted permease PerM family protein [Burkholderia pseudomallei 14] gi|167820858|ref|ZP_02452538.1| Predicted permease PerM family protein [Burkholderia pseudomallei 91] gi|167829215|ref|ZP_02460686.1| Predicted permease PerM family protein [Burkholderia pseudomallei 9] gi|167899287|ref|ZP_02486688.1| Predicted permease PerM family protein [Burkholderia pseudomallei 7894] gi|167907623|ref|ZP_02494828.1| Predicted permease PerM family protein [Burkholderia pseudomallei NCTC 13177] gi|167915960|ref|ZP_02503051.1| Predicted permease PerM family protein [Burkholderia pseudomallei 112] gi|167923807|ref|ZP_02510898.1| Predicted permease PerM family protein [Burkholderia pseudomallei BCC215] gi|217422033|ref|ZP_03453536.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226195553|ref|ZP_03791140.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237508341|ref|ZP_04521056.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|242313791|ref|ZP_04812808.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177421|ref|ZP_04884077.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254184824|ref|ZP_04891413.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254186044|ref|ZP_04892562.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254194276|ref|ZP_04900708.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254203008|ref|ZP_04909370.1| putative membrane protein [Burkholderia mallei FMH] gi|254208340|ref|ZP_04914689.1| putative membrane protein [Burkholderia mallei JHU] gi|254263546|ref|ZP_04954411.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254301103|ref|ZP_04968547.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|52422690|gb|AAU46260.1| putative membrane protein [Burkholderia mallei ATCC 23344] gi|121225358|gb|ABM48889.1| putative membrane protein [Burkholderia mallei SAVP1] gi|126222133|gb|ABN85638.1| putative membrane protein [Burkholderia pseudomallei 668] gi|126230631|gb|ABN94044.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126239038|gb|ABO02150.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134250308|gb|EBA50388.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147746053|gb|EDK53131.1| putative membrane protein [Burkholderia mallei FMH] gi|147751027|gb|EDK58095.1| putative membrane protein [Burkholderia mallei JHU] gi|157811370|gb|EDO88540.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157933730|gb|EDO89400.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698461|gb|EDP88431.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169651027|gb|EDS83720.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184215416|gb|EDU12397.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217394264|gb|EEC34283.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225932038|gb|EEH28038.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|235000546|gb|EEP49970.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|238524422|gb|EEP87855.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|242137030|gb|EES23433.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243061963|gb|EES44149.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254214548|gb|EET03933.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|261826786|gb|ABN00128.2| putative membrane protein [Burkholderia mallei NCTC 10229] Length = 352 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 137/353 (38%), Gaps = 3/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L FF + I+ P+ ++ + Sbjct: 2 DSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ + + L Sbjct: 62 ALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 122 HNYGLTDIAGIQKKLTD-GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + + V+R+T G +A +G + G +W+ G+ + Sbjct: 181 EIGRRVRRALP-LDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + Y + G I+ L + + +VD LRP LV Sbjct: 240 LWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G K+P +GG+ G+ G IGP++ AL W + + E Sbjct: 300 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE 352 >gi|221067315|ref|ZP_03543420.1| protein of unknown function UPF0118 [Comamonas testosteroni KF-1] gi|220712338|gb|EED67706.1| protein of unknown function UPF0118 [Comamonas testosteroni KF-1] Length = 391 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 144/357 (40%), Gaps = 5/357 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +++ + L+ + + ++ P++ + + T A+ Sbjct: 4 LPLHKRAFILLLIAVTAGFGLVLEEYAVAIFWGVVFAIVFAPLHRKLLMRMPNRPTLAAL 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + + I+PL + + E + +V N G V + + +P W + Sbjct: 64 ATLLISLVMVILPLSLIGLSLIKETSAIYDQVSSGNLSAGSYVEQIFNALP--SWLTPWM 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 K + + A G L + + M+ +FF RDG Sbjct: 122 EKLHLGTLEEIQAKLSNIALQASKLAATKAVGLGQNTLGFVVGFGVMLYLIFFLLRDGKE 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ + L P + ++++ VIR+T G +A +G + G +W+ G+ V Sbjct: 182 LVARIWA-ATPLAPEHKRELATKFITVIRATVKGNLAVAAAQGALGGLIFWILGIQGAVL 240 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+ A ++++P GA + + V+IY L G I L +G + + +VD LRP LVG Sbjct: 241 WAVVMAFLSLLPAVGAGLVWGPVAIYFLATGAITKGLILAAYGVLVIGLVDNVLRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 K+P +GG+ GL G +GP + AL W+ + +E+++ Sbjct: 301 KDTKMPDYVVLISTLGGMALFGLSGFVLGPAIAALFMAAWELFATMQLQVEEQLNRE 357 >gi|296112637|ref|YP_003626575.1| hypothetical protein MCR_0410 [Moraxella catarrhalis RH4] gi|295920331|gb|ADG60682.1| conserved hypothetical protein [Moraxella catarrhalis RH4] gi|326560897|gb|EGE11262.1| hypothetical protein E9G_03549 [Moraxella catarrhalis 7169] gi|326563867|gb|EGE14118.1| hypothetical protein E9M_02983 [Moraxella catarrhalis 46P47B1] gi|326566876|gb|EGE17015.1| hypothetical protein E9K_01168 [Moraxella catarrhalis 103P14B1] gi|326569796|gb|EGE19846.1| hypothetical protein E9U_05771 [Moraxella catarrhalis BC8] gi|326571292|gb|EGE21314.1| hypothetical protein E9Q_00168 [Moraxella catarrhalis BC1] gi|326571600|gb|EGE21615.1| hypothetical protein E9S_03234 [Moraxella catarrhalis BC7] gi|326575122|gb|EGE25050.1| hypothetical protein E9W_03963 [Moraxella catarrhalis CO72] gi|326576792|gb|EGE26699.1| hypothetical protein E9Y_02270 [Moraxella catarrhalis 101P30B1] gi|326577531|gb|EGE27408.1| hypothetical protein EA1_02057 [Moraxella catarrhalis O35E] Length = 390 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 86/332 (25%), Positives = 162/332 (48%), Gaps = 7/332 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ F P L A I+ + ++PIY+ F +K S +F A + T + + VPL+ Sbjct: 27 CFKVVRFFIVPALWAGILAYVTFPIYTFFHTKVRLSPSFSAFLMTFCISLMIGVPLIVGV 86 Query: 83 YYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETF 140 +Y E+ V V+ Q G + +P + D+P G + + +P++ + Sbjct: 87 FYLQHEVLSFVGMVIRRLQAGYLDLPSQIKDLPVIGQTIKDTLWEINKNPETTMEAVRAW 146 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++++ + L + ++ LFFFYRDG S+ +Q+ ++ Sbjct: 147 VQSHLY-----YGKMAFDAVLKNLAKLGMALMTLFFFYRDGKSLVRQIRQAMRNIIGDRI 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V ++ G+ + A+ + ++ G Y P+ + L +IT ++A+IP G P Sbjct: 202 DDYIDSVGATTQAVVYGIGLTALAQAILAGMGYAFTNAPNPILLTLITFVVALIPFGTPF 261 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ V+++LL +G+ L LWG + + VD +RP ++ G K+PF+ F G++GG+ Sbjct: 262 AWGGVAVWLLSQGHTTEGIGLGLWGILVISWVDNLIRPIVISGATKIPFIIIFIGVLGGL 321 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GLFIGPV++A+ +W+E I K Sbjct: 322 TAFGFVGLFIGPVVLAIGLAVWREWISQHKNE 353 >gi|126665221|ref|ZP_01736204.1| Predicted permease PerM family protein [Marinobacter sp. ELB17] gi|126630591|gb|EBA01206.1| Predicted permease PerM family protein [Marinobacter sp. ELB17] Length = 378 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 5/344 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 M++ + + + +K FF P+ A+ I P+ + + A+I Sbjct: 8 RAFLAMLVGVSVAFILLMKPFFGPIFWAVAIALIFHPVQLKLARRFGDRPNTNALITLFL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + ++P+L L + E L K+ + + ++ + A + + Sbjct: 68 CMVIVVIPVLLLVASLVAEGIGLYQKIQTGD---VRPGEYIDQVNQSFPAIQSFLAQFDI 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S L +G F+ + A G + L + M+ FF RDG S+ + L Sbjct: 125 SFSELRDRTVNLVVSGSQFLGKQALGLGQNTFQFFLGLALMVYLAFFLLRDGVSLVELLI 184 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + +V R+T G +IAI +G + G +W+ G+ + GV+ A Sbjct: 185 RALP-LGDERERLLFAKFAEVTRATVKGNLLIAIIQGAMGGLIFWILGIEGALLWGVVMA 243 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I++++P GA + + +IYL G++ A L +G + + + D LRP LVG KLP Sbjct: 244 IVSLLPAVGAALVWVPAAIYLAAVGDVVQALILTAFGVVVIGLADNVLRPILVGRDTKLP 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GG+ G+ G +GP++ AL W I Sbjct: 304 DYIVLLSTLGGLAMFGINGFVMGPLVAALFNAFWGIFIREFSHE 347 >gi|241763379|ref|ZP_04761434.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] gi|241367421|gb|EER61732.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] Length = 357 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 5/343 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L + ++ + L L F V +++ P + + + S Sbjct: 2 HPTLFQNRVFLILLTLVTLAFGAILWQFHGAVFWGVVLAILFTPFHRKLLRRMPGSPNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASE 121 A+ + + I+P+ + + E + ++ G + + L +P WA+ Sbjct: 62 ALATLGLCLVIVILPMTLISLSLVQEATGIYDRLKSGQLNFGQYLQQILDAMPA--WAAG 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + F A G L++ + M+ LFF RDG Sbjct: 120 LLDRFNLTTLGELQEKLSSVAVQASQFFATKALSIGQNTLEFVVGFGVMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ +++ L + ++++ VIR+T G ++A +G + G +W+ G+ Sbjct: 180 SALAARINR-ATPLDTEHKRQLASKFTTVIRATVKGNIVVAASQGALGGLIFWILGIQGP 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V GV A ++++P GA + + V++Y L G ++ L L+G + +VD LRP L Sbjct: 239 VLWGVAMAFLSLLPAVGAGLVWGPVALYFLATGAVWQGVVLALYGVGVIGLVDNILRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VG K+P +GG+ GL G IGP + AL W Sbjct: 299 VGKDTKMPDYVVLISTLGGMALFGLTGFVIGPAIAALFIASWD 341 >gi|78063136|ref|YP_373044.1| hypothetical protein Bcep18194_B2289 [Burkholderia sp. 383] gi|77971021|gb|ABB12400.1| protein of unknown function UPF0118 [Burkholderia sp. 383] Length = 353 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 139/350 (39%), Gaps = 5/350 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ + Q +++ + + + L F V I+ P+ ++ + Sbjct: 5 ESGHDHQKFFYFLLAAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLA 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A++ ++ + I+PL+F+ + E+ + ++ A + + +P Sbjct: 65 ALVTLSLIVLIVILPLVFVAATLVQEIAYVYQEIKTAQPNYSQYFQDIIHALPSS--IQH 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L K+ T A G + +S M+ +FF RDG Sbjct: 123 LLQKYGLSNLPGIQKKLTDGAAQISQLAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 183 GEIGRRVRRALP-LDDEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGV 241 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + ++Y L+ G ++ L + + +VD LRP L Sbjct: 242 VLWGALMAFLSLLPAIGASLVWVPAALYFLMIGALWKCAILVAFCVGVIGLVDNLLRPIL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 302 VGKDTKMPDWVVLISTLGGMALFGITGFVIGPLVAALFMASWDIYARSEQ 351 >gi|238782558|ref|ZP_04626589.1| hypothetical protein yberc0001_22080 [Yersinia bercovieri ATCC 43970] gi|238716485|gb|EEQ08466.1| hypothetical protein yberc0001_22080 [Yersinia bercovieri ATCC 43970] Length = 367 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 139/346 (40%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I+ S + ++ F A ++ +WP+ A+I T+ ++ L Sbjct: 19 IFILIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKILWGKRWLAALIMTLLLVLL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P WL +P G W ++ + Sbjct: 79 FVIPIALLVSSLVQNSGPLIQWASSPSNLRMPDVTWLQSVPMVGNKLYSSWHTLIAGGGN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I ++ A+ G + L ++F ++ F G + + Sbjct: 139 AIIAKVQPYVGAAATWLVAQAAHIGYFLIHLALMVLFSVLLYF----HGEQVGLGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ V+ I Sbjct: 195 VRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYATLFTVLMFICC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W I + +D LRP+L+ +P + Sbjct: 255 VAQLGPLLILVPAIIWLYWTGDTTWGTVLLVWSCI-VGTMDNVLRPYLIRMEADMPMILI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 314 LSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESITE 359 >gi|317402762|gb|EFV83307.1| exported protein [Achromobacter xylosoxidans C54] Length = 373 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 76/336 (22%), Positives = 137/336 (40%), Gaps = 8/336 (2%) Query: 13 RWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R ++ +++VS+ + L F+ V I+ P+ + + A+I Sbjct: 4 RTFLLLLVVVSIAFGWLLWPFYGAVFWGAILAILFAPLQRRLVPRIGGRRNLAALITLAM 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L I+PL+ + + E L + G + + +P +L + Sbjct: 64 VLLLVILPLVVISGSLVREGANLYQSIKSGQINFGAYFQQAMEALPPS--VHDLLARFDL 121 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F+ A G + +S M+ LFF RDG ++Q++ Sbjct: 122 ADIPSLQEKLSAGAMQASQFLATQALSIGQDTFQFVVSFAIMLYLLFFLLRDGPQLAQRV 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + R V+R+T G +A +G + G + + G+ + GVI Sbjct: 182 KRAVP-LSETHKHHLFRKFTTVVRATVKGNIAVAASQGALGGIIFSILGIQGALLWGVIM 240 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++++P GA + + V+IY L+ G L +G + + +VD LRP LVG K+ Sbjct: 241 GFLSLLPAVGAGLIWAPVAIYFLLTGATIKGVVLIAFGVLVIGMVDNVLRPILVGKDTKM 300 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ GL G IGP++ AL W Sbjct: 301 PDYVVLISTLGGMALFGLNGFVIGPLIAALFMASWD 336 >gi|113866712|ref|YP_725201.1| membrane spanning protein/permease [Ralstonia eutropha H16] gi|113525488|emb|CAJ91833.1| hypothetical membrane spanning protein/Predictedpermease [Ralstonia eutropha H16] Length = 385 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 7/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ F+SW Y+ + Sbjct: 1 MSSGQLIEKIAAVFALIVLIGGSLLVLAPFTTALLWGAILAFSSWYPYTVLSRWLGNRRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A+I + + + P ++ + EL + V +HGIP +P WLS +P G + Sbjct: 61 LAALICVLLATVVVLGPFVYAGASFSAHLDELSALVDRYREHGIPQLPAWLSSLPYVGSY 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W ++ + + G + G LSII FFFY Sbjct: 121 LQNSWNSVINADSEMVANLRKLIAPVGHMLLGA-GLSIGAGLGQLALSIILA----FFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G L + + + + ++ G+ A + ++ G W+AGV Sbjct: 176 TGGELAIAWLRAGMHRIAGERADHLLELAGSTVKGVVYGVLGTAFIQAVLAGIGLWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG +T +++IP G P+ + +++L G A L +WG + + D ++P Sbjct: 236 PGAAILGFVTFFLSVIPVGPPLVWLPAALWLYHTGATGWAIFLVVWGVGVVSMADNIVKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +P + G++GG G LG+FIGP L+A+ + ++ + + Sbjct: 296 LLISKGTGMPLIWIMLGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQAE 349 >gi|298487561|ref|ZP_07005603.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157945|gb|EFH99023.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 354 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + ++ +++ + + ++ L F+ V A+I+G P+ K S Sbjct: 1 MNETTLQYKTLI-MLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I+P++ + + E L V D+ + Sbjct: 60 LTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVESGQLDIAGYLAEFKDLLPHSIQA 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ G ++ A FG D+ +S+ M+ L+FF RD Sbjct: 120 LLDRLGMGDLEGLRDKITK-GAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++A+ +G + G +W +PS Sbjct: 179 GQELVRKIRTAFP-LGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++++P GA I + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 ALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|229589626|ref|YP_002871745.1| hypothetical protein PFLU2129 [Pseudomonas fluorescens SBW25] gi|229361492|emb|CAY48368.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 355 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 143/334 (42%), Gaps = 3/334 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + ++ L F+ V A+I+G P+ + + F ++ + + + I+P+ Sbjct: 18 VTIAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNFTSLATLSACLIIAILPV 77 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + E L V ++ + L + + + L+ Sbjct: 78 IITSALLVQEGATLYKNVESGKLDVAGYIEQFKNVLPPYFQHLLDRFGMGNLEGLREKIV 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G F A FG D+ +S M+ LFF RDG + +++ + L Sbjct: 138 K-SAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVRTAVP-LAEP 195 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 +++ +V+R+T G ++A+ +G + G +W +PS + V+ A ++++P G Sbjct: 196 QKRRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVG 255 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A I + V+ Y L+ G+I+ L L+G + +VD LRP LVG K+P + Sbjct: 256 AGIVWGPVAAYFLLSGSIWQGVVLALFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTL 315 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GG+ GL G IGP++ AL W + + Sbjct: 316 GGLSVFGLNGFVIGPLVAALFMSSWALFVESKPR 349 >gi|152988070|ref|YP_001347913.1| hypothetical protein PSPA7_2549 [Pseudomonas aeruginosa PA7] gi|150963228|gb|ABR85253.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 352 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 5/330 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F+ V I+ P+ + ++ A+I + + I+P++F+ Sbjct: 24 WLLLPFYGAVFWGTILAIIFAPVQRRLQVRLKDRKNLAALITLSICVLIVIIPVIFIAGS 83 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E + +V + + ++ +P + + + + + Sbjct: 84 LVQEGASVYQRVKSGELNFAAYLQQAVAALPPS--VHQWLERFDLTNLASLQEKLSSVAM 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + A G D+ +S M+ LFF RDG + +++ L + + Sbjct: 142 QASQVVATKAFSIGQNTFDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHHL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 VIR+T G +A +G + G +WL G+ + G + A ++++P GA + + Sbjct: 201 FAKFTTVIRATVKGNIAVAATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALIW 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 261 APVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMAL 320 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GL G IGP++ AL W +E Sbjct: 321 FGLNGFVIGPLIAALFMASWDLFTGREEEP 350 >gi|37526518|ref|NP_929862.1| putative inner membrane protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785949|emb|CAE15001.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 369 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 140/354 (39%), Gaps = 6/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + +I+ S + +K F + A ++ +WP+ I Sbjct: 10 LPKLLFTLIFLSLLIVTSFWVIKPFIFGFVWAGMVVIATWPLLEKLQDSLWGKRWIAVSI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T+ ++ LF++P+ L + L+ + IP WL+ IP G W Sbjct: 70 MTLLLILLFVIPIALLVSSLLENSAPLIQWTKSPSHFQIPTMTWLNSIPLVGDKLYSAWN 129 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ ++ I + A+ G CL ++F ++ Y G + Sbjct: 130 SLITDGGNVLIAKVQPYVGEAATWFFTQAANAGRFVFHLCLMVLFSVL----LYLKGEQV 185 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + IR+ LG+ + A+ + ++ G ++G+P L Sbjct: 186 TMSIRHFAIRLANKRGDAAILLAAQSIRAVALGVVVTALVQAIIGGLGLAVSGIPYATLL 245 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G + +L G+ T L +W I + +D LRPFL+ Sbjct: 246 TVLMFVCCVAQLGPLLILVPAVAWLYWTGDTTWGTVLLVWSCI-VTTMDGFLRPFLIRLG 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP G++GG+ + G++GLFIGPV++A+ + + + E + ++ Sbjct: 305 ADLPMALILIGVIGGILSFGMIGLFIGPVVLAVAYRLLIAWMNEVPEPENDLAE 358 >gi|49611311|emb|CAG74758.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 396 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 6/347 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ L Sbjct: 46 VFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLVMTLLLILL 105 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F+VP+ L + L+S P WL+ IP G W L S Sbjct: 106 FVVPIAVLVSSVIDNSSALMSWGSRQENLSPPTLEWLTSIPLVGEKLFNSWQALLQSGGS 165 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ A+ G + L +IF + Y G ++++ + Sbjct: 166 GLFAKVQPYFGKTATWLVAQAAHVGRFLMHCSLMLIFSAL----LYYKGEAVAKAVRHFA 221 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 222 IRLGRERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFLCC 281 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W + +D +RP L+ LP L Sbjct: 282 LAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSC-VVGTIDNVIRPMLIRMGADLPMLLI 340 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 341 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNLLSVN 387 >gi|330954547|gb|EGH54807.1| hypothetical protein PSYCIT7_24977 [Pseudomonas syringae Cit 7] Length = 356 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 141/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFISSW 340 >gi|330972921|gb|EGH72987.1| hypothetical protein PSYAR_20762 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 354 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|167032838|ref|YP_001668069.1| hypothetical protein PputGB1_1830 [Pseudomonas putida GB-1] gi|166859326|gb|ABY97733.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 354 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 149/343 (43%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + + ++ + + + L ++ + A+I+G P+ + + Sbjct: 1 MNETALQNKALA-VLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRFGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A T+ + + I+P++ + E L ++ D+ Sbjct: 60 LAAAATTLVCLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVEHGKDMLPAFAQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G + A FG ++ +S M+ LFFF R+ Sbjct: 120 GLDNMGMGNLDGLRDKITKW-ATQGSQALASQAFSFGQGTFEFVISFGIMMYLLFFFLRE 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ L L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GPEVARRV-RLAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGLIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA I + V+ Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWAVLMAFLSLLPAVGAGIVWAPVAAYFLLTGAILPGVILTAFGVLVIGLVDNLLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG ++P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFMSSW 340 >gi|289625440|ref|ZP_06458394.1| hypothetical protein PsyrpaN_09999 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649278|ref|ZP_06480621.1| hypothetical protein Psyrpa2_16276 [Pseudomonas syringae pv. aesculi str. 2250] gi|330866824|gb|EGH01533.1| hypothetical protein PSYAE_06090 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 354 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + ++ +++ + + ++ L F+ V A+I+G P+ K S Sbjct: 1 MNETTLQYKTLI-MLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I+P++ + + E L V D+ + Sbjct: 60 LTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQA 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ G ++ A FG D+ +S+ M+ L+FF RD Sbjct: 120 LLDRLGMGDLEGLRDKITK-GAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++A+ +G + G +W +PS Sbjct: 179 GQELVRKIRTAFP-LGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++++P GA I + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 ALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|253989383|ref|YP_003040739.1| inner membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780833|emb|CAQ83995.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 369 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 140/354 (39%), Gaps = 6/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + +I+ S + +K F + A ++ +WP+ + I Sbjct: 10 LPKLLFTLIFLSLLIVTSFWVMKPFILGFVWAGMVVIATWPLLEKLQNSLWGKRWLAVAI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T+ ++ LF++P++ L + L++ +P WLS IP G W Sbjct: 70 MTLLLILLFVIPIVLLVSSLLENSAPLIAWAKSPTNFQMPAMTWLSSIPLVGDKLYSGWN 129 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ ++ I + A+ G L ++F ++ Y G + Sbjct: 130 SLITDGGNVLIAKVQPYIGEAATWFFTQAANAGRFVFHLALMVLFSVL----LYLKGEQV 185 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + IR+ LG+ + A+ + ++ G ++G+P L Sbjct: 186 TMSIRHFAVRLADKRGDAAILLAAQSIRAVALGVVVTALVQAIIGGIGLAVSGIPYATLL 245 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G + +L G+ T L +W + +D LRPFL+ Sbjct: 246 TVLMFVCCVAQIGPLLILVPAVAWLYWTGDTTWGTALLVWSC-VVTTMDGFLRPFLIRLG 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP G++GG+ + G++GLFIGPV++A+ + + I E K ++ Sbjct: 305 ADLPMALILTGVIGGILSFGMIGLFIGPVVLAVAYRLLIAWMNEIPEPKNDLTE 358 >gi|261340952|ref|ZP_05968810.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] gi|288316812|gb|EFC55750.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] Length = 369 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 145/355 (40%), Gaps = 6/355 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L +F+ +L A I+ P+ + + E + + + Sbjct: 8 KGFFILILALVTWAFFDVLSPYFSAILWAAILTIIFNPVKNKLRTALGERNGLASFLTLC 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +PL + +E+ + +K+ N Q V + +P WAS H Sbjct: 68 IICLIVFIPLTVILSSLAIELNVVYTKLQQNNTQFPEVVAGVFNRLP--DWASGFLADHD 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LTNAAEIQKKLSDAALKGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G + G A+ + G+ + G + Sbjct: 186 ILD-SLPLSDFAKQHLFAKFVGVSRATVKGTAVVAVVQGTLGGIAFAIVGIDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P G+ I + +IYL I+ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLVPAVGSAIVWVPAAIYLFATHQIWQGLFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE-NKEKISSNF 360 +P +GG+ G+ G IGP++ AL W E N E++ + F Sbjct: 305 MPDYLILISTLGGMELYGINGFVIGPLIAALFIACWNLFSGRDHEGNAEELDAEF 359 >gi|170696533|ref|ZP_02887657.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170138580|gb|EDT06784.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 372 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 29 ERVKKQRAASLALYIGLVLLALWVVRDFLPVVGWAAVLAIALWPLLRKVEGSRWLTGRTT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + T+++ L ++P+ + E +L A ++GI +P ++ +P G + Sbjct: 89 LIAAVLTLAIALLVVLPVGVGIAQALREAHDLTDWFKAAQENGIAMPDFIHRLPFGAHQA 148 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + P + +K + FG + FM++ LF ++ Sbjct: 149 EAWWQAYLTP---PLRDSAAMKGLHSTTVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQA 205 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L + F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 206 GPRLSGALARGLQRGFGEDGAQLVQRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPH 265 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +ITAI AM+P API+F+ +++L +G++ +A L ++G+I +F+ + +RP L Sbjct: 266 VALLALITAIAAMLPFCAPITFSLAALWLFSQGSVASAIGLLVFGSIVVFVAEHFVRPVL 325 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + + Sbjct: 326 IGSSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTDLVQ 372 >gi|71737762|ref|YP_275294.1| hypothetical protein PSPPH_3124 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485456|ref|ZP_05639497.1| hypothetical protein PsyrptA_19480 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71558315|gb|AAZ37526.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323803|gb|EFW79887.1| hypothetical protein PsgB076_15967 [Pseudomonas syringae pv. glycinea str. B076] gi|320327942|gb|EFW83947.1| hypothetical protein PsgRace4_21198 [Pseudomonas syringae pv. glycinea str. race 4] gi|330881164|gb|EGH15313.1| hypothetical protein Pgy4_19969 [Pseudomonas syringae pv. glycinea str. race 4] gi|330889643|gb|EGH22304.1| hypothetical protein PSYMO_12697 [Pseudomonas syringae pv. mori str. 301020] gi|330989763|gb|EGH87866.1| hypothetical protein PLA107_32388 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010711|gb|EGH90767.1| hypothetical protein PSYTB_13666 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 354 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + ++ +++ + + ++ L F+ V A+I+G P+ K S Sbjct: 1 MNETTLQYKTLI-MLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I+P++ + + E L V D+ + Sbjct: 60 LTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQA 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ G ++ A FG D+ +S+ M+ L+FF RD Sbjct: 120 LLDRLGMGDLEGLRDKITK-GAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++A+ +G + G +W +PS Sbjct: 179 GQELVRKIRTAFP-LGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++++P GA I + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 ALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|66046439|ref|YP_236280.1| hypothetical protein Psyr_3210 [Pseudomonas syringae pv. syringae B728a] gi|63257146|gb|AAY38242.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] Length = 354 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|104782535|ref|YP_609033.1| hypothetical protein PSEEN3498 [Pseudomonas entomophila L48] gi|95111522|emb|CAK16242.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 354 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 155/352 (44%), Gaps = 4/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET+L + + ++ + + L+ L + + A+I+G P+ + + Sbjct: 1 MNETVLQNKALT-VLLALVTVAFLWILLPYAGAIFWAVILGILFSPLQRHLLLRFGGRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A V+ + + ++P++ + + E L ++ D+ Sbjct: 60 LATATALVTCLLIAVLPVIVISALLVQEGAALYQRIESGQLDIAGYIERGKDMLPAYAQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G F+ A FG ++ +S M+ LFFF R+ Sbjct: 120 FLDRMGMGNLDGLREKISKW-ATEGSQFLAGQAFSFGQGTFEFLVSFGIMLYLLFFFLRE 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GAEVARKVRQAVP-LPEQQKRRLQLKFKRVVRATVKGNLLVAITQGALGGLIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA I + V++Y L+ G + L +G + + +VD LRP Sbjct: 238 ALVWAVLMAFLSLLPAVGAGIVWGPVAVYFLLTGATWQGVVLIAFGVLVIGLVDNLLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVG ++P +GG+ GL G IGP++ AL W + + + Sbjct: 298 LVGKDTRMPDYLVLVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIFVSSKPQ 349 >gi|78062585|ref|YP_372493.1| hypothetical protein Bcep18194_B1735 [Burkholderia sp. 383] gi|77970470|gb|ABB11849.1| protein of unknown function UPF0118 [Burkholderia sp. 383] Length = 356 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 167/345 (48%), Gaps = 7/345 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + +++++L+ ++ F + A +I WP+ F T +A Sbjct: 16 RTQQVSRAVLYAALLVIALWVIRDFIPAIAWACVIAIAMWPMLKRFESHRLFRNRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASEL 122 V+ T ++ L ++P+ + + +L + +GIPVP + +P G +E Sbjct: 76 VVITAAISLLVVLPVAVAATQAIGQAHDLREWLRTVQDNGIPVPDVIGRLPYGAAQITEW 135 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W +L HP + + + + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP----LHAASAMHGVNSEKFLAFGRQFGTKLAHALLEFGFMLVTLFVILRAGH 191 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +S L F ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 192 KLSGALLQGARRAFGRSGAELIERMVAAVFGTVTGLVVVGLGEGALLGIAYALAGVPHAA 251 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++TAI AM+P AP+ F +++L ++G A + + G + +F+ + +RP L+G Sbjct: 252 LLGLVTAIAAMLPFCAPVVFCGAALWLFVQGATMWAIVVAVLGFVVVFVAEHFVRPVLIG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 312 SSARLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|330981355|gb|EGH79458.1| hypothetical protein PSYAP_22717 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 354 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|221210158|ref|ZP_03583139.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221170846|gb|EEE03312.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 356 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAIAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 151 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 211 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATAWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 T GL+GLF+GP LM ++ V+W E Sbjct: 331 TFGLIGLFVGPALMTVLTVLWAEW 354 >gi|329114629|ref|ZP_08243388.1| UPF0118 membrane protein [Acetobacter pomorum DM001] gi|326696109|gb|EGE47791.1| UPF0118 membrane protein [Acetobacter pomorum DM001] Length = 398 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 105/350 (30%), Positives = 170/350 (48%), Gaps = 8/350 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SS 59 + + + + +FI+ V++Y ++GF + + +WP+Y+ +K S Sbjct: 48 QRSRRGQEMARTVLALFIVGVAVYTIQGFLPALAWGSVFAIATWPLYTRACNKWPHAASG 107 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T L ++ T ++ LF++PL + + E + + + A ++G+PVP + +P G A Sbjct: 108 TLLPLLFTAAMALLFVIPLTLVTLEAVGEAQSALEWLSHAREYGVPVPDTIHRLPFGSAA 167 Query: 120 -SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S+ W HLS P+ L + G F I+ LFF Y Sbjct: 168 ISKWWEAHLSDPRDLSGMLGNLDSKG-----VAVTRAVGSQVAHRATLFCFSILTLFFLY 222 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG S+ +Q + F + I R + I + G+ ++ IGEGL+LG Y A Sbjct: 223 KDGLSVIRQCRVVSCRAFGKRGESIGRQIVASIHGSVQGLVLVGIGEGLLLGIIYVFAHA 282 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P GVITA+ AMIP A I+ VS+ +L++G+ A F GA+ +F D +RP Sbjct: 283 PHPALFGVITAVAAMIPFCAMIAVGLVSLLILVQGSSVAAITTFCIGAVIIFTADHFIRP 342 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+GG KLPFL G++GG T GL+GLF+GP MA + ++W Sbjct: 343 ALIGGSTKLPFLWVLLGILGGAETWGLIGLFVGPAAMAALNLLWCRWAYG 392 >gi|149377701|ref|ZP_01895436.1| hypothetical protein MDG893_12430 [Marinobacter algicola DG893] gi|149357986|gb|EDM46473.1| hypothetical protein MDG893_12430 [Marinobacter algicola DG893] Length = 371 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 146/351 (41%), Gaps = 5/351 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 M++ + L + +K FF P+ A+ I P+ + + +A++ + Sbjct: 8 RTFLAMLVGVSLAFILLMKPFFGPIFWAVAIALIFHPVREYLARRLGDRPNTIALLTLLI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + ++P+L L + E L ++ + ++ + A E + Sbjct: 68 CMVIVVIPVLGLVTSLVAEGLSLYQRIQEGQ---LRPGDYIDRVIQSFPAIESFFAQFGL 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G F+ + A FG + L + MI FF RDG + L Sbjct: 125 DFAEVRDRVVSGFVGGSQFLAKQALGFGQNTFQFFLGLALMIYLAFFLLRDGSKLVDLLI 184 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + +V R+T G +IA+ +G + G +W+ G+ + GV+ A Sbjct: 185 RALP-LGDERERLLFAKFAEVTRATVKGNLLIAVIQGALGGGIFWILGIQGALLWGVVMA 243 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I++++P GA + + ++YL G + +A L +G I + + D LRP VG KLP Sbjct: 244 IVSLLPAVGAALVWVPAALYLAATGEMVSAIVLTAFGVIVIGLADNLLRPVFVGRDTKLP 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ G+ G +GP++ AL W I E+++ S N Sbjct: 304 DYIVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFGESEQAPSVN 354 >gi|326316808|ref|YP_004234480.1| hypothetical protein Acav_1999 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373644|gb|ADX45913.1| protein of unknown function UPF0118 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 146/343 (42%), Gaps = 5/343 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T L +++ + L L L F V +I+ P++ + + Sbjct: 2 KTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGIILAILFAPMHRRLLRYMPRRANLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASE 121 A+ + + I+P+ + + E + ++ + + +P WA + Sbjct: 62 ALCTLSLCLLVVILPMTLITVSLVQEASLVYERIRSGQLDFTAYFHQVMQAMP--SWAMQ 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S + + F+ A FG L + +S M+ LFF RDG Sbjct: 120 ILDRLNLTTASELQARLSSVTVQATQFVGSKAIDFGQNTLQFVVSFGIMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ ++ L + ++++ VIR+T G +A +G + G A+W G+ + Sbjct: 180 PALAARIRE-ATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLGIQAP 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V GV+ A ++++P GA + + V+IYLL G ++ L +G + +VD LRP L Sbjct: 239 VLWGVLMAFLSLLPAVGAGLIWAPVAIYLLATGAVWQGAGLAAFGIGVIGLVDNVLRPVL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VG K+P +GG+ GL G IGPV+ AL W Sbjct: 299 VGKDTKMPDYIVLISTLGGMSLFGLTGFVIGPVIAALFIATWD 341 >gi|221196526|ref|ZP_03569573.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221203195|ref|ZP_03576214.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221177129|gb|EEE09557.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221183080|gb|EEE15480.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 356 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAIAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 151 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 211 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATAWAVVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 T GL+GLF+GP LM ++ V+W E Sbjct: 331 TFGLIGLFVGPALMTVLTVLWAEW 354 >gi|167840497|ref|ZP_02467181.1| Predicted permease PerM family protein [Burkholderia thailandensis MSMB43] Length = 352 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 138/353 (39%), Gaps = 3/353 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L FF + I+ P+ ++ + Sbjct: 2 DSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + I+PL F+ + E+ ++ + + L Sbjct: 62 ALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTLQPNMTQYFQEFMHALPSSVHRVL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 122 HNYGLTDIAGIQKKLTD-GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGG 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L A+ + + V+R+T G +A +G + G +W+ G+ + Sbjct: 181 EIGRRVRRALP-LNEAHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVI 239 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P GA + + + Y + G ++ L + + +VD LRP LV Sbjct: 240 LWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQVWKCVILVAFCVGVIGLVDNLLRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G K+P +GG+ G+ G IGP++ AL W + + E Sbjct: 300 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDLFARTEQTDWE 352 >gi|237797235|ref|ZP_04585696.1| hypothetical protein POR16_00180 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020085|gb|EGI00142.1| hypothetical protein POR16_00180 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 354 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 141/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQALLDRLGMGDLEGLRDKITK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G++ G +W +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGMLGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVILGLFGVFVIGLVDNVLRPVLVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLIAALFISSW 340 >gi|237808109|ref|YP_002892549.1| hypothetical protein Tola_1348 [Tolumonas auensis DSM 9187] gi|237500370|gb|ACQ92963.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 365 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 7/336 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F PV A+II + SWP+Y + T A++ T+ V FI+P L++ Sbjct: 29 VVQPFIIPVAWAMIIAYASWPLYCLLRQSIKLRPTLSALLMTLLVTTAFILPTLWVISLL 88 Query: 86 MLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKT 143 E+ + G P +P ++ +P G W L T+ + P + + T+L+ Sbjct: 89 RDEVGIAYTHFNSRIAEGPPKLPEYIRTLPWLGSWLDGLITQSIGDPAAFQDKISTWLQE 148 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G + + G + F +I LFF +RDG I Q+ + A Sbjct: 149 -GSNQLVSVLGDVGRN----AAKVGFALITLFFMFRDGEHILTQVHKVLFRFLGARIDNY 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V ++ + G+ + A+ +G V G YW + + + LG ITA+++MIP GAP ++ Sbjct: 204 LAAVGEMTIAVVWGLILTALAQGFVAGLGYWWLDLSAPMLLGAITALVSMIPFGAPFAWG 263 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +++++LLI G N L LWGA+ + VD +RP ++ ++PFL FG++GG+ Sbjct: 264 SITVFLLIDGQYLNGIILLLWGALAVSSVDNLVRPMVISSATQIPFLLVMFGVLGGLAAF 323 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL+GLF+GPV++A++ IW+E + SS Sbjct: 324 GLVGLFMGPVILAVLMAIWQEWLEESDLESATDSSQ 359 >gi|299768601|ref|YP_003730627.1| hypothetical protein AOLE_01755 [Acinetobacter sp. DR1] gi|298698689|gb|ADI89254.1| hypothetical protein AOLE_01755 [Acinetobacter sp. DR1] Length = 372 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 98/357 (27%), Positives = 173/357 (48%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-S 58 M N Q ++ + + FI++ + LK F PVL A II + +WPIY E Sbjct: 1 MHPYAPNLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGETR 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIP-GG 116 +T A + V+ + VP + E + L + G + VP ++ D+P G Sbjct: 61 NTLNATLMISLVILVVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVG 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S + + P S +++++ + + + F + +LFF Sbjct: 121 KEISRTLNELNNDPNSTIQNVAAWVQSH-----LSYGRVLLGEISKNIVKLGFAVFSLFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 FYRDG I Q+ E + + + R+ G+ + AI + ++ G +Y++A Sbjct: 176 FYRDGQMILSQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVA 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ + L + T ++A+IP G PIS+ V ++L +G A + +WG + + D + Sbjct: 236 GVPNPMVLTIATFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVVIVSSSDNVI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 RP ++ G K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + Sbjct: 296 RPLVISGATKIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPE 352 >gi|330958144|gb|EGH58404.1| hypothetical protein PMA4326_06145 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 354 Score = 223 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTMLYKNVETGQLDIAGYLAEFKDLLPHSIQALLDRLGMGDLEGLRDKITK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFISSW 340 >gi|162419988|ref|YP_001607006.1| putative inner membrane protein [Yersinia pestis Angola] gi|162352803|gb|ABX86751.1| putative membrane protein [Yersinia pestis Angola] Length = 365 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 143/347 (41%), Gaps = 10/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 19 IFIMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 F++P+ L + L+ + +P W+ IP G S T Sbjct: 79 FVIPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGAN 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + ++ G + A+ G + L ++F ++ Y G ++ + Sbjct: 139 ALMAKVQPYI---GATWFVAQAAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHF 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 192 AMRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFIC 251 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I++ G+ T L +W I + +D LRP+L+ +P + Sbjct: 252 CVAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMIL 310 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 311 ILSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 357 >gi|253688831|ref|YP_003018021.1| hypothetical protein PC1_2454 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755409|gb|ACT13485.1| protein of unknown function UPF0118 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 395 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 138/347 (39%), Gaps = 6/347 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ L Sbjct: 46 AFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVIVMTLLLILL 105 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FIVP+ L + L+S P WL+ IP G W L S Sbjct: 106 FIVPIGVLVSSVVDNSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQALLQSGGS 165 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ A+ G + L +IF + Y G ++++ + Sbjct: 166 GLFAKVQPYFGKTATWLVAQAAHVGRFLMHCSLMLIFSAL----LYYKGEAVAKAVRHFA 221 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 222 IRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFLCC 281 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G I+L G+ T L +W + +D +RP L+ LP L Sbjct: 282 LAQLGPLPVLIPAIIWLYWTGDNTWGTILLVWSC-VVGTIDNIIRPVLIRMGADLPMLLI 340 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 341 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 387 >gi|134293526|ref|YP_001117262.1| hypothetical protein Bcep1808_4840 [Burkholderia vietnamiensis G4] gi|134136683|gb|ABO57797.1| protein of unknown function UPF0118 [Burkholderia vietnamiensis G4] Length = 379 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F + T +A + T V L ++P+ Sbjct: 58 WVIRDFLPAIAWACVIAIALWPLLKRFESNRWFRDRPTLIATVVTAGVSLLVVLPVAIAL 117 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 + + +L + +GI +P +S +P G ++ W +L HP + + T + Sbjct: 118 GQAIAQAHDLRIWLHSIQDNGIALPDVVSRLPYGSTQIADWWQANLGHP----LHAGTAM 173 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G +S L F Sbjct: 174 HGANGEKVIAFGRQFGTKLAHALFEFGFMLVTLFVIMRAGHQLSGALLLGARRAFGRGGA 233 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + T G+ ++ +GEG +LG AY LAG+P LG +TA+ AM+P API Sbjct: 234 ALIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGLPHAALLGFVTAVAAMLPFCAPIV 293 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 294 FCGAALWLFVQGATAWAIVVLALGIVVVFVAEHFVRPVLIGNSTRLPFLLVLFGILGGAE 353 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E + Sbjct: 354 TFGLIGLFVGPALMTVLTMLWSEWVA 379 >gi|290508508|ref|ZP_06547879.1| hypothetical protein HMPREF0485_00279 [Klebsiella sp. 1_1_55] gi|289777902|gb|EFD85899.1| hypothetical protein HMPREF0485_00279 [Klebsiella sp. 1_1_55] Length = 369 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 149/351 (42%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+FI+ ++ + L +++ +L A I+ P+ + ++ E + A++ V + Sbjct: 12 ILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALLTIVIICL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL + E+ + SK+ + Q V + +PG WA +H Sbjct: 72 IVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLFAHLPG--WARSFLAEHNLDSA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + ++ A G + +S M+ LFF +DG + L Sbjct: 130 QQIQQQLSDVALKSGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLV-LLTLE 188 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + V R+T G +A+ +G + G A+W+AG+ + G + A + Sbjct: 189 SLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSILWGALMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +IYL G ++ + + I + +VD LRP LVG K+P Sbjct: 249 SLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S N +++ F Sbjct: 309 LILIATLGGMEIYGINGFVIGPLIAALFIACWNLLSGREHAGNTDELDEEF 359 >gi|296157947|ref|ZP_06840780.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295891715|gb|EFG71500.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 368 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 5/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ I+++ L F PV ALII + +WP+Y + + A++ Sbjct: 9 DRKRVIQAVLLAAILVLGYVVLWPFVIPVAWALIIAYVTWPLYCRLHALIRGRAWISALL 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 T+ V + +P+ L E L V G + +P +++ IP W Sbjct: 69 MTLLVGMIAFIPIASLISPVFREFLALYRNVAEYAASGPLRIPDFIARIP---WLGHALQ 125 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +S ++ +G +I AS G + + F + LFF YRDG ++ Sbjct: 126 QLVSEFADDPQRLHAYITQSGDRWIGELASMVGS-VGRNAIKLGFATLTLFFAYRDGHTL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +Q+ + + + V RS G+ + AI +G + G YW AGV + + L Sbjct: 185 LRQVQRVMRPVLGDRLDGYLSAIGGVTRSVVYGLALTAIVQGALAGLGYWAAGVEAPLLL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT + A+IP G P + V I L+ GN F L LWGA+ + VD +RP ++ Sbjct: 245 TIITTLAALIPFGTPFVWIPVGIGLIANGNTFAGVGLLLWGALVVSWVDNLIRPVVISNA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +++PFL FG++GG+ G +GLF+GPV++A++ +W+E + E S++ Sbjct: 305 VRVPFLLVLFGVLGGIGAFGFIGLFVGPVVVAILLALWREWCTSEPETGSVDSAD 359 >gi|330944584|gb|EGH46538.1| hypothetical protein PSYPI_31203 [Pseudomonas syringae pv. pisi str. 1704B] Length = 354 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTMLYKNVETGQLDIAGYLAEFKDLLPHSAQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|302185038|ref|ZP_07261711.1| hypothetical protein Psyrps6_01802 [Pseudomonas syringae pv. syringae 642] Length = 354 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTMLYKNVETGQLDIAGYLAEFKDLLPHSVQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|270261462|ref|ZP_06189735.1| putative transport protein [Serratia odorifera 4Rx13] gi|270044946|gb|EFA18037.1| putative transport protein [Serratia odorifera 4Rx13] Length = 370 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 144/351 (41%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+FI+ + L +++ VL A+I+ P+ + + + ++++ + + Sbjct: 12 ILILFIVTAAFLDVLGPYYSSVLWAIILAVIFHPLKNKLKQYLGDRNGLVSLLTLLVICL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL + LE L K+ N + + +PG WA +H Sbjct: 72 IVFTPLAIIASSLALEFNVLYEKLQNNNTQLPAMLAEVMQHLPG--WARHFLAEHNLDSA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G F+ G ++ + M+ LFF +DG + Sbjct: 130 AEIQKQLSDVALKGGQFLAGSVFLIGKGTFNFAVGFGIMLYLLFFLLKDGPYLVTLALEA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++AI +G + G A+++ G+ + G + A + Sbjct: 190 LP-LSEHVKHHLFVKFAAVSRATVKGTVVVAIVQGALGGLAFYITGIDGSLLWGALMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +IY G ++ L + + + +VD LRP LVG K+P Sbjct: 249 SIIPAVGSAIIWVPAAIYFFATGMLWQGAFLVGFFVVIIGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S +E ++I F Sbjct: 309 LILISTLGGMEIYGINGFVIGPLIAALFIACWNILSGRDSEETTDEIDEAF 359 >gi|192288979|ref|YP_001989584.1| hypothetical protein Rpal_0549 [Rhodopseudomonas palustris TIE-1] gi|192282728|gb|ACE99108.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 384 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 155/353 (43%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 P ++ I+ +++ + + L ++ VL ++I P+ A+ Sbjct: 2 PASENKFFILLLVVATGLFGWILWPLYSAVLWGMVIAILFAPLNRGLNRAFGFRRNLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ ++ + ++P+ L E + +K+ N + R L L Sbjct: 62 MSVTIIVLMVLLPMSLLGAALAREAAGMYTKIESGNLDLLKTMRELLAARPDWLGDLLSR 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ L G ++ A G D+ +++ M+ LFF RDG + Sbjct: 122 FGVGNLADIQQRLSAAL-LRGSQYLAGQALDIGQSTFDFTVNLFVMVYLLFFLLRDGDLL 180 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L + ++ VIR+T G +IA+ +G + G A+++ G+ + Sbjct: 181 AARIRR-ATPLGVDHQTRLLDKFTVVIRATVKGNMLIALIQGALGGLAFYVLGISGALMW 239 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ A ++++P GA I + +++YL+ G++++ L +WG + + +VD LRP LVG Sbjct: 240 AVVMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLIVWGMLVIGMVDNFLRPILVGK 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P +GG+ GL G IGPV+ A+ W +A ++ + Sbjct: 300 DTRMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATWDIYSIAREDAGDTP 352 >gi|325274729|ref|ZP_08140770.1| hypothetical protein G1E_15893 [Pseudomonas sp. TJI-51] gi|324100130|gb|EGB97935.1| hypothetical protein G1E_15893 [Pseudomonas sp. TJI-51] Length = 354 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 156/352 (44%), Gaps = 4/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + + ++ + + ++ L ++ + A+++ P+ + + + Sbjct: 1 MNETALQNKALA-VLLALVTIAFVWILLPYYGAIFWAVVLAILFAPLQRNLVMRFGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+ T+ + + ++P++ + E L ++ D+ + Sbjct: 60 LAAITTTMICLLVAVLPVIITSLLLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQN 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G + A FG ++ + M+ LFFF R+ Sbjct: 120 GLDHLGVGNLDGLRDKITKW-ATQGSQVLASQAFSFGQGTFEFLIGFGIMMYLLFFFLRE 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ L L +++ +V+R+T G ++A+ +G + G +W+ +PS Sbjct: 179 GADVARRV-RLAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAVTQGALGGFIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ A+++++P GA I + V++Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWGVLMALLSLLPAVGAGIVWAPVAVYFLLTGAILPGIILTAFGVLVIGLVDNLLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVG ++P +GG+ GL G IGP++ AL W A + Sbjct: 298 LVGKDTRMPDYLILVSTLGGLTVFGLNGFVIGPLIAALFMSSWAIFAEAKPQ 349 >gi|189352951|ref|YP_001948578.1| putative permease [Burkholderia multivorans ATCC 17616] gi|189336973|dbj|BAG46042.1| putative permease [Burkholderia multivorans ATCC 17616] Length = 356 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAMAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 +++ +L +GIP+P ++ +P G ++ W +L HP + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + F +FG FM++ LF R G ++ +L + F Sbjct: 151 HGASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ Sbjct: 211 HLIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 T GL+GLF+GP LM ++ V+W E Sbjct: 331 TFGLIGLFVGPALMTVLTVLWAEW 354 >gi|238753651|ref|ZP_04615013.1| hypothetical protein yruck0001_13830 [Yersinia ruckeri ATCC 29473] gi|238708203|gb|EEQ00559.1| hypothetical protein yruck0001_13830 [Yersinia ruckeri ATCC 29473] Length = 367 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I+ + ++ F A ++ +WP+ + + +I T+ ++ L Sbjct: 19 IFILTMIIACFWVVQPFIMGFAWAGMVVIATWPLLIKLQAVLWGRRSLAVIIMTLLLVLL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ IP WL IP G W L+ Sbjct: 79 FVIPIALLVSSLVENSAPLIKSASSPANLQIPEAAWLKSIPMIGDKLYSSWHTLLAGGGK 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + I + A+ G L L ++F ++ F G S++Q + Sbjct: 139 VLIAKVQPYVGETATWFVAQAAHIGRFLLHLALMVLFSVLLYF----RGESVAQGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ +G++ G +AG+P + L V+ + Sbjct: 195 IRLADQRGDAAVVLAAQSIRAVALGVVVTALVQGILGGIGLAIAGIPYAMLLTVVMFVCC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W I + +D LRP L+ LP + Sbjct: 255 VAQLGPLLVLIPAVIWLYWSGDNTFGTLLLVWSCI-VGTLDGVLRPALIRMGADLPMVLI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + I E +E I+ Sbjct: 314 LSGVIGGLLSFGMIGLFIGPVVLAVSYRLIAAWIHEAPEPEENIAE 359 >gi|145598044|ref|YP_001162120.1| putative inner membrane protein [Yersinia pestis Pestoides F] gi|108775672|gb|ABG18191.1| membrane protein [Yersinia pestis Nepal516] gi|108779660|gb|ABG13718.1| putative membrane protein [Yersinia pestis Antiqua] gi|145209740|gb|ABP39147.1| membrane protein [Yersinia pestis Pestoides F] Length = 346 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 139/343 (40%), Gaps = 6/343 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 M +I+ S + ++ F A ++ +WP+ + V+ T+ ++ LF++ Sbjct: 1 MGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILLFVI 60 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKI 135 P+ L + L+ + +P W+ IP G W +S + + Sbjct: 61 PIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGANALM 120 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + A+ G + L ++F ++ Y G ++ + Sbjct: 121 AKVQPYIGATATWFVAQAAHVGYFLIHLALMVLFSVL----LYIHGEQVALGIRHFAMRA 176 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I + Sbjct: 177 ADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICCVAQ 236 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + I++ G+ T L +W I + +D LRP+L+ +P + G Sbjct: 237 LGPLLVLVPAVIWVYWTGDTTWGTILLVWSCI-VGTLDNFLRPYLIRMEADMPMILILSG 295 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 296 VIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 338 >gi|70731365|ref|YP_261106.1| hypothetical protein PFL_4009 [Pseudomonas fluorescens Pf-5] gi|68345664|gb|AAY93270.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 353 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 7/327 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ L F+ + A+I+G P+ ++ ++ + + + I+P++ Sbjct: 22 FIWILLPFYGALFWAVILGIVFAPLQRRLQARFGWQRNLTSLCTLLICLVIAILPVIITS 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E EL K+ + + +L+ + LK L E +K Sbjct: 82 VLLVQEGAELYKKIESGQ---LDIAAYLAQFKHSLPPYFQHLLDRFGLGELKGLQEKVVK 138 Query: 143 T--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + G ++ A FG ++ +S M+ LFFF RDG + +++ + L Sbjct: 139 SAMQGSQYLATQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGPELVRKIRTAVP-LAEYQK 197 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 +++ +V+R+T G ++A+ +G + G +W +PS + V+ A ++++P GA Sbjct: 198 RRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVGAG 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + V+ Y LI G I+ L L+G + +VD LRP LVG K+P +GG Sbjct: 258 IVWGPVAAYFLISGAIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTKMPDYLILISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 + GL G IGP++ AL W + Sbjct: 318 LAIFGLNGFVIGPLIAALFMSSWALFV 344 >gi|121610898|ref|YP_998705.1| hypothetical protein Veis_3980 [Verminephrobacter eiseniae EF01-2] gi|121555538|gb|ABM59687.1| protein of unknown function UPF0118 [Verminephrobacter eiseniae EF01-2] Length = 352 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 5/332 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + + L F V +I+ P + + + T A+ + + Sbjct: 13 LLLILVTIAFGAILWQFHGAVFWGVILAILFAPWHRRLLDRMPGRPTLAALCTLALCLIV 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 I+PL + E + +V G+ + + ++ +P WA L Sbjct: 73 VILPLAAITVSLAQEATVIYERVYTGQIDFGLYLQQVIAALPA--WAVNLLDGLHLTSVG 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + F+ A G L++ +S M+ LFF RDG ++ ++ Sbjct: 131 QWQQRLSAVAVQASQFLATQALNIGQNTLEFIVSFGVMLYLLFFLLRDGPRLALRIGQ-A 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L P + + + R VIR+T G ++A +G + G +W+ G+ V GV+ A ++ Sbjct: 190 TPLEPNHKQPLIRNFTTVIRATVKGNIVVAAAQGALGGLIFWVLGIQGPVLWGVLMAFLS 249 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + V+IY L G I+ L +G + +VD LRP LVG K+P Sbjct: 250 LLPAVGAGLIWVPVAIYFLATGAIWQGVVLTAFGVGVIGLVDNILRPILVGKDTKMPDYI 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ GL+G IGPV+ AL W+ Sbjct: 310 VLISTLGGMALFGLMGFVIGPVIAALFIASWE 341 >gi|293604365|ref|ZP_06686772.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817242|gb|EFF76316.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 365 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 142/345 (41%), Gaps = 5/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E+ +++ + + + L F+ V I+ P+ + + Sbjct: 1 MSESSSLHHRTFLLLLVVVSIAFGWLLWPFYGAVFWGAILAIIFGPLQRRLVKRMGGRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWA 119 A+I + V+ L I+PL+ + + E L + G + ++ +P + Sbjct: 61 LSALITLLGVLLLVILPLVAISGSLVREGANLYQSIKSGELNFGAYFQQAMAALPPSVHD 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 P + LS ++ F+ A G + +S M+ LFF R Sbjct: 121 VLARFDLADIPSLQEKLSAGAMQ--ASQFLATQALSIGQDTFQFVISFGIMLYLLFFLLR 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +S ++ L A+ + + R V+R+T G +A +G + G + + + Sbjct: 179 DGPELSARIKR-AMPLSEAHKQHLFRKFTTVVRATVKGNIAVAAAQGALGGIIFSVLSIQ 237 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GVI ++++P GA + + V+IY L+ G + L +G + + +VD LRP Sbjct: 238 GALLWGVIMGFLSLLPAVGAGLIWAPVAIYFLLTGAVVKGAVLIAFGVLVIGMVDNVLRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 ILVGKDTKMPDYVVLISTLGGMALFGLNGFVIGPLIAALFMASWD 342 >gi|33597100|ref|NP_884743.1| hypothetical protein BPP2512 [Bordetella parapertussis 12822] gi|33566551|emb|CAE37807.1| putative exported protein [Bordetella parapertussis] Length = 358 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 147/345 (42%), Gaps = 5/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ L +++ + + + L F+ V I+ P++ + Sbjct: 1 MSQSSLFNSRAFVGLLIVVTIAFAWLLWPFYGAVFWGAILAIIFAPVHRRIAVRLAPRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWA 119 A++ + V+ + I+PL+F+ + E L ++ N G + + + +P Sbjct: 61 LAALLTLLMVLLVVIIPLIFITGSLVQEGANLYQRLKSGNLNFGAYLQQAIDALP--PTV 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ + T FI A G + + M+ LFF R Sbjct: 119 HDVLARFDLADLGSIQEKLTAGMMQASQFIATQAFNIGQDTFQFLIGFGVMLYLLFFLLR 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +S++L L + + + R VIR+T G ++A +G + G + + G+ Sbjct: 179 DGSQLSRRLRRAVP-LDEHHKQHLFRKFTTVIRATVKGNIVVAAAQGALGGVMFSVLGIQ 237 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GVI A ++++P GA + + V++Y L+ G I+ L L+G + + +VD LRP Sbjct: 238 GALLWGVIMAFLSLLPAIGAGLIWAPVAVYFLLTGAIWQGVVLILFGVLVIGMVDNVLRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG KLP +GG+ GL G IGP++ AL W Sbjct: 298 LLVGKDTKLPDYVVLISTLGGMALFGLNGFVIGPLIAALFVACWD 342 >gi|33593825|ref|NP_881469.1| hypothetical protein BP2885 [Bordetella pertussis Tohama I] gi|33600943|ref|NP_888503.1| hypothetical protein BB1958 [Bordetella bronchiseptica RB50] gi|33563898|emb|CAE43157.1| putative exported protein [Bordetella pertussis Tohama I] gi|33575378|emb|CAE32455.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 358 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 146/345 (42%), Gaps = 5/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ L +++ + + + L F+ V I+ P++ + Sbjct: 1 MSQSSLFNSRAFVGLLIVVTIAFAWLLWPFYGAVFWGAILAIIFAPVHRRIAVRLAPRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWA 119 A++ + V+ + I+PL+F+ + E L ++ N G + + + +P Sbjct: 61 LAALLTLLMVLLVVIIPLIFITGSLVQEGANLYQRLKSGNLNFGAYLQQAIDALP--PTV 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ + T FI A G + + M+ LFF R Sbjct: 119 HDVLARFDLADLGSIQEKLTAGMMQASQFIATQAFNIGQDTFQFLIGFGVMLYLLFFLLR 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +S++L L + + + R VIR+T G +A +G + G + + G+ Sbjct: 179 DGSQLSRRLRRAVP-LDEHHKQHLFRKFTTVIRATVKGNIAVAAAQGALGGVMFSVLGIQ 237 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GVI A ++++P GA + + V++Y L+ G I+ L L+G + + +VD LRP Sbjct: 238 GALLWGVIMAFLSLLPAIGAGLIWAPVAVYFLLTGAIWQGVVLILFGVLVIGMVDNVLRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG KLP +GG+ GL G IGP++ AL W Sbjct: 298 LLVGKDTKLPDYVVLISTLGGMALFGLNGFVIGPLIAALFVACWD 342 >gi|157370292|ref|YP_001478281.1| hypothetical protein Spro_2050 [Serratia proteamaculans 568] gi|157322056|gb|ABV41153.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 373 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 146/351 (41%), Gaps = 7/351 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+FI+ + L +++ VL A+I+ P+ E + ++++ + Sbjct: 12 ILILFIVTAAFLDVLGPYYSSVLWAIILAVIFHPVKQKLKQYLGERNGLVSLLTVAVICL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL + +E+ + +K+ N Q + + L +PG WA T+H Sbjct: 72 IVFTPLAIIASSLAIELNVVYTKLQGNNAQFPVVLADTLRVLPG--WARHFLTEHNLDNA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G ++ G ++ + M+ LFF +DG + L Sbjct: 130 AEIQKKLSQVALQGGQYLAGSVFLIGKGTFNFAVGFGVMLYLLFFLLKDGPYLVN-LTLQ 188 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++A +G + G A+++ G+ + + A + Sbjct: 189 ALPLSEHVKHHLFVKFAAVSRATVKGTVVVAAVQGALGGLAFYITGIEGSLLWAALMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +IY G ++ L + + + +VD LRP LVG K+P Sbjct: 249 SIIPAVGSAIIWVPAAIYFFATGMLWKGLFLVGFFVVIIGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 +GG+ G+ G IGP++ AL W S E ++I +F Sbjct: 309 LILISTLGGMEIYGINGFVIGPLIAALFIACWNILSGRDSAETTDEIDEDF 359 >gi|239816920|ref|YP_002945830.1| hypothetical protein Vapar_3950 [Variovorax paradoxus S110] gi|239803497|gb|ACS20564.1| protein of unknown function UPF0118 [Variovorax paradoxus S110] Length = 360 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 5/345 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G+ ++ + + L+ L FF VL + + P+Y + A+ Sbjct: 7 QRGVFLALLAAVTVAFLWVLMPFFGAVLWGVALAILFTPLYKRLLKAMPGKPNAAALSTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKH 126 + + I+PL + + E+ ++ + + L+ +P W L+ + Sbjct: 67 AICLFIVILPLAMVGVSLVQEIVQVTQSIRSGQINFAAYFQQILNAVP--QWLLNLFDRF 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + G I A G D+ +S M+ L+F RDG ++S+ Sbjct: 125 NLGDMEAWQARISAGAAQGSQLIAGQALTIGQNTFDFVISFFVMLYLLYFLVRDGSALSK 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + + VIR+T G +AI +G + G A+WL GV + V Sbjct: 185 SMREAVP-LARPHTHYLLNKFTTVIRATVKGNVAVAIAQGAIGGLAFWLLGVQGALLWAV 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA + + V+IY L G+ + L G + +VD LRP LVG Sbjct: 244 LMAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGILVFVGVFVIGLVDNILRPVLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++P +GG+ G+ G IGPV+ AL W + + + Sbjct: 304 QMPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAWSLFVESGQ 348 >gi|53803180|ref|YP_115110.1| hypothetical protein MCA2709 [Methylococcus capsulatus str. Bath] gi|53756941|gb|AAU91232.1| conserved hypothetical integral membrane protein [Methylococcus capsulatus str. Bath] Length = 362 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 76/333 (22%), Positives = 161/333 (48%), Gaps = 10/333 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ ++ F + A+ + + +WP+++ + E T A++ T + + + PL++L Sbjct: 20 LTYAVVRPFLVSIGWAVFVSYVAWPLHAWSQRRFEGRKTLSALVTTALLGSVVLAPLIWL 79 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 E+ EL+ + + +P ++S IP + L L Sbjct: 80 AVLLQGEVSELIRSLPDWLEQKPRLPDFVSHIP-------YFGNELQAVVDQFEDLHGLL 132 Query: 142 KTNGIDFIPRFAS---RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 K + +++ R S + + + LFF +RDG ++ + + + Sbjct: 133 KRHAPEWVRRLGSPVLGIMTTLVQNAAVLFMTLFTLFFLFRDGLQLATDVRRVFTRVLGE 192 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K + +++ G+ + A+ +G + G YW+ GV + + LG+ T ++AMIP G Sbjct: 193 RLKGYFATIEATVKAVLYGIVLTALAQGFLAGLGYWIVGVKAPIVLGIATTLIAMIPFGT 252 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ +VSI+LL++G + L LWG + + +D +RP ++ +PF+ FG++G Sbjct: 253 PFAWGSVSIWLLLQGETWAGVSLALWGTLVISWIDNIIRPLVISSATHIPFVLVMFGVLG 312 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+ + G +GL +GPV++A+ +W+E + ++E Sbjct: 313 GLASFGFIGLVLGPVILAMALAVWREWLQQVRE 345 >gi|238787117|ref|ZP_04630917.1| hypothetical protein yfred0001_6030 [Yersinia frederiksenii ATCC 33641] gi|238724905|gb|EEQ16545.1| hypothetical protein yfred0001_6030 [Yersinia frederiksenii ATCC 33641] Length = 367 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 72/359 (20%), Positives = 143/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 6 LRRFDLPKLMFGVIFIMIMIVASFWVVQPFVMGFAWAGMVVIATWPLLVRLQKLLWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 ++ T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 66 LAVMVMTLLLILLFVIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQTIPMVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ ++ I + ++ A+ G + L ++F I+ F Sbjct: 126 YSGWHTLIAGGGNVLIAKIQPYIGASVTWLVAQAAHVGYFLIHLALMLLFSILLYF---- 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G LAGV Sbjct: 182 HGEQVGLAIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQSVLGGIGLALAGVQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ + + G + I+L G+ T L +W I + +D LRP+ Sbjct: 242 YATLFTVLMFVCCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCI-VGTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESITE 359 >gi|213970022|ref|ZP_03398154.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301381377|ref|ZP_07229795.1| hypothetical protein PsyrptM_02033 [Pseudomonas syringae pv. tomato Max13] gi|302062148|ref|ZP_07253689.1| hypothetical protein PsyrptK_19351 [Pseudomonas syringae pv. tomato K40] gi|302130458|ref|ZP_07256448.1| hypothetical protein PsyrptN_03622 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925126|gb|EEB58689.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|330875760|gb|EGH09909.1| hypothetical protein PSYMP_11317 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965579|gb|EGH65839.1| hypothetical protein PSYAC_13156 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017284|gb|EGH97340.1| hypothetical protein PLA106_14651 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 354 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWPRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V ++ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKNLLPHSIQALLDRLGMGDLEGLRDKITK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVALYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLIAALFISSW 340 >gi|39933625|ref|NP_945901.1| hypothetical protein RPA0548 [Rhodopseudomonas palustris CGA009] gi|39647471|emb|CAE25992.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris CGA009] Length = 386 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 155/353 (43%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 P ++ I+ +++ + + L ++ VL ++I P+ A+ Sbjct: 2 PASENKFFILLLVVATGLFGWILWPLYSAVLWGMVIAILFAPLNRGLNRAFGFRRNLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ ++ + ++P+ L E + +K+ N + R L L Sbjct: 62 MSVTIIVLMVLLPMSLLGAALAREAAGMYTKIESGNLDLLKTMRELLAARPDWLGDLLSR 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ L G ++ A G D+ +++ M+ LFF RDG + Sbjct: 122 FGVGNLADIQQRLSAAL-LRGSQYLAGQALDIGQSTFDFTVNLFVMVYLLFFLLRDGDLL 180 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L + ++ VIR+T G +IA+ +G + G A+++ G+ + Sbjct: 181 AARIRR-ATPLGVDHQTRLLDKFTVVIRATVKGNMLIALIQGALGGLAFYVLGISGALMW 239 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ A ++++P GA I + +++YL+ G++++ L +WG + + +VD LRP LVG Sbjct: 240 AVVMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLIVWGMLVIGMVDNFLRPILVGK 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P +GG+ GL G IGPV+ A+ W +A ++ + Sbjct: 300 DTRMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATWDIYSIAREDAGDTP 352 >gi|264678266|ref|YP_003278173.1| hypothetical membrane protein [Comamonas testosteroni CNB-2] gi|262208779|gb|ACY32877.1| hypothetical membrane protein [Comamonas testosteroni CNB-2] Length = 368 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 139/333 (41%), Gaps = 6/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ + + ++ P++ + + T A+ + + + I+PL + Sbjct: 2 VLEEYAVAIFWGVVFAIVFAPLHRKLLMRMPNKPTLAALATLLISLVMVILPLSLIGLSL 61 Query: 86 MLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + ++ N G V + + +P W + K + + Sbjct: 62 IKETAAIYDRISSGNLSAGSYVEQVFNALP--SWLTPWMEKLHLGTLEEIQTKLSNIALQ 119 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A G L + + M+ +FF RDG + ++ + L P + ++++ Sbjct: 120 ASKLAATKAVGLGQNTLGFVVGFGVMLYLIFFLLRDGKELVARIWA-ATPLAPEHKRELA 178 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 VIR+T G +A +G + G +WL G+ V V+ A ++++P GA + + Sbjct: 179 IKFITVIRATVKGNLAVAAAQGALGGLIFWLLGIQGAVLWAVVMAFLSLLPAVGAGLVWG 238 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+IY L G + L +G + + +VD LRP LVG K+P +GG+ Sbjct: 239 PVAIYFLATGAVTKGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALF 298 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GL G +GP + AL W E ++E +EK+ Sbjct: 299 GLSGFVLGPAIAALFMAAW-ELFATMQEQEEKL 330 >gi|261822011|ref|YP_003260117.1| inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606024|gb|ACX88510.1| protein of unknown function UPF0118 [Pectobacterium wasabiae WPP163] Length = 369 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 138/347 (39%), Gaps = 6/347 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ F + + ++ T ++ L Sbjct: 20 VFITIMIIACFWVVQPFILGFAWACMVVIATWPLLIKFQALLWGRRSLAVLVMTFLLILL 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FIVP+ L + L+S P WL+ IP G W L S Sbjct: 80 FIVPIAVLISSVVDNSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQALLQSGGS 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ A+ G + L +IF + Y G ++++ + Sbjct: 140 GLFAKVQPYFGKTATWLVAQAAHIGRFLMHCTLMLIFSAL----LYYKGEAVAKAVRHFA 195 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 196 IRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFLCC 255 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W + +D +RP L+ LP L Sbjct: 256 LAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSC-VVGTIDNVIRPMLIRMGADLPMLLI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 315 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQSILSVN 361 >gi|292488505|ref|YP_003531389.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|292899691|ref|YP_003539060.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199539|emb|CBJ46656.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553936|emb|CBA20981.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|312172649|emb|CBX80905.1| putative AI-2E family transporter [Erwinia amylovora ATCC BAA-2158] Length = 372 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 78/359 (21%), Positives = 149/359 (41%), Gaps = 10/359 (2%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 QG+ + +FI+ V+ L+ L +F+ +L A I+ P+ S + + ++ Sbjct: 4 QGMSKGFFIFILAVTTLGFLHILGPYFSAILWAAILAIIFHPLKSKIRKYCGDRNGLASM 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELW 123 + + + + +PL + +E L +++ V ++ +P W Sbjct: 64 LTLLIICLIVFIPLAVVVSSLAVEFNALYNRIQANQTELTTVATSVVNHLP--EWLRHFL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + + + + G F G + + M+ LFF +DG Sbjct: 122 AENNLNDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGVMLYLLFFLLKDGAY 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L + V R+T G ++A+ +G + G A+W AG+ + Sbjct: 182 LVGMALDAIP-LSRFVKHHLFVKFAAVSRATVKGTVVVAVVQGTLGGIAFWCAGIQGSML 240 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G + A +++IP G+ I + V I+LL G + L + + + +VD LRP LVG Sbjct: 241 WGSLMAFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVVIGLVDNILRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 K+P +GG+ G+ G IGP++ AL W S + N ++I S+F Sbjct: 301 KDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRDHRGNTDEIDSDF 359 >gi|290475511|ref|YP_003468399.1| putative transport protein [Xenorhabdus bovienii SS-2004] gi|289174832|emb|CBJ81633.1| putative transport protein [Xenorhabdus bovienii SS-2004] Length = 369 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 132/337 (39%), Gaps = 6/337 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F + + ++ +WP+ I T+ ++ LF++P+ L Sbjct: 27 CFWVLSPFVLGFIWSGMVVIATWPLLEKLQQHLWGKRWIAVSIMTLLLVLLFVIPIALLV 86 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 + L+ + +P WLS IP G W ++ ++ + Sbjct: 87 SSLLENSTPLIEWAKSPSTFQLPQLEWLSRIPVIGEDLYVKWQDTVADGSNILLTKIPPY 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + A+ G L ++F ++ Y G + + L Sbjct: 147 IGKTATWFFTQAANAGRFLFHLVLMVLFSVL----LYWKGEQVMLSIRHFAIRLADQRGD 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + IR+ LG+ + A+ + + G +AG+P + L V+ I + G + Sbjct: 203 AVVLLAAQSIRAVALGVVVTALVQAIAGGIGLAIAGIPYAMILTVLMFICCVAQLGPLLV 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +L G T L +W + L +D LRPFL+ LP + G++GG+ Sbjct: 263 LVPSIAWLYWTGETTWGTVLVIWS-LVLTTMDGVLRPFLIRLGADLPMVLILTGVIGGIL 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++GL+GLFIGPV++A+ + + + + + K Sbjct: 322 SLGLIGLFIGPVVLAVSYRLLLAWMNEVPKPENKTED 358 >gi|319779612|ref|YP_004130525.1| hypothetical protein TEQUI_1468 [Taylorella equigenitalis MCE9] gi|317109636|gb|ADU92382.1| membrane protein, putative [Taylorella equigenitalis MCE9] Length = 387 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 3/336 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ I + ++ L +F+ + A+I PIY + K A++ + + L Sbjct: 15 LLLLITIGFIWVLAPYFSALFWAVIFAVLFRPIYLKLLEKMPGKRNLSALLTLILAIILG 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I+P+ + + +L KV + + + S L H++ S + Sbjct: 75 IIPIGIIATSLTSQAVDLYQKVESGQINFGEYVDLVYNNLPSPIHSFLEKFHITSEFSFR 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L G + + + + M+ ++FF RDG +I + + Sbjct: 135 EKL-LQLFNQGSKMMATELVNISQNTFTFIMDLGIMLYLMYFFIRDGETIKEYIKRFTP- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + K+ V+R+T G ++AI +G + G + + G+PS + GVI A ++++ Sbjct: 193 LSGNHKIKLFSKFLTVVRATVKGNMLVAIAQGALGGFIFAVLGIPSPILWGVIMAFLSLL 252 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P GA + + V+IYLL+ G++ L +WG + + + D LRP LVG +LP Sbjct: 253 PAIGAALVWLPVAIYLLVSGSLVEGIILMVWGVVVIGMSDNLLRPILVGKDTRLPDYLIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +GG+ GL G IGP+L AL W E A+ Sbjct: 313 ITTIGGMAVFGLNGFVIGPLLAALFITFWGELPNAV 348 >gi|217968723|ref|YP_002353957.1| hypothetical protein Tmz1t_0268 [Thauera sp. MZ1T] gi|217506050|gb|ACK53061.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 363 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 7/330 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S L F PV A+II F +WP+Y ++ T A++ T+ + FI+P L++ Sbjct: 26 SYAVLHVFIVPVAWAIIIAFATWPLYRKLRARLRRYPTVSALLMTLLLSAAFILPALWMG 85 Query: 83 YYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETF 140 E+ ++ V + G + +P ++ +P G W L P + + + Sbjct: 86 ALLRTEVGVAIATVTAQIKAGSLALPDFIRSMPWVGDWLQSLLDSLTGDPDAFRAQLTEW 145 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ + G + F +I +FF YRDG + Q+ + Sbjct: 146 VRQGSDQAVA-LIGDVGRN----AAKLGFALITVFFLYRDGDRVLAQVQVVLHRFLGERV 200 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V + ++ G+ A+G+GLV G YW AG+P+ V LG +TA++AMIP G P Sbjct: 201 DAYLAAVGGMTKAVVWGLIATALGQGLVAGLGYWWAGLPAPVLLGAVTALIAMIPFGTPF 260 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ ++ ++LL+ G+ L LWG + + VD +RP ++ ++PFL FG++GG+ Sbjct: 261 AWGSLGVWLLVSGDTAAGIGLLLWGTLVVSWVDNLIRPLVISNATQIPFLLVMFGVLGGL 320 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GL+GLF+GPV++A++ +W+E I Sbjct: 321 AAFGLVGLFLGPVVLAVLMAVWREWIEESD 350 >gi|238765277|ref|ZP_04626205.1| hypothetical protein ykris0001_43250 [Yersinia kristensenii ATCC 33638] gi|238696500|gb|EEP89289.1| hypothetical protein ykris0001_43250 [Yersinia kristensenii ATCC 33638] Length = 367 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 143/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ + Sbjct: 6 LRRFDLPKLMFGVIFIMIMIIASFWVVQPFVMGFAWAGMVVIATWPLLIRLQNLLWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+I T+ ++ LF++P+ L + L+ + +P WL +P G Sbjct: 66 LAAIIMTILLILLFVIPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSVPLVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ ++ I ++ A+ G + L ++F I+ F Sbjct: 126 YSGWHTLIAGGGNVLIAKVQPYVGAAATWLVAQAAHIGYFLIHLALMVLFSILLYF---- 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 182 HGEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ I + G + I+L G+ T L +W + +D LRP+ Sbjct: 242 YATLFTVLMFICCVAQLGPLLIMIPAVIWLYWTGDSTWGTILLVWSC-VVGTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVSEAPEPEESITE 359 >gi|115360276|ref|YP_777414.1| hypothetical protein Bamb_5533 [Burkholderia ambifaria AMMD] gi|115285564|gb|ABI91080.1| protein of unknown function UPF0118 [Burkholderia ambifaria AMMD] Length = 355 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 142/356 (39%), Gaps = 9/356 (2%) Query: 1 MRETMLN----PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 MRE ++ Q +++ + + + L F V I+ P+ ++ Sbjct: 1 MREPSMDSGHDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFG 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPG 115 + A+++ ++ + I+PL+F+ + E+ + ++ A + + +P Sbjct: 61 KRRNLAALVSMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSRYFHDIIHALPT 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L K+ T F A G + +S M+ LF Sbjct: 121 S--IQNLLQKYGLSNIPGIQKKLTDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMLF 178 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F RDG I +++ L + + V+R+T G +A+ +G + G +W+ Sbjct: 179 FLLRDGGEIGRRVRR-SIPLDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWI 237 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+ V G + A ++++P GA + + ++Y L G I+ L + + +VD Sbjct: 238 LGIEGVVLWGALMAFLSLLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDN 297 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LRP LVG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 298 LLRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 353 >gi|323529942|ref|YP_004232094.1| hypothetical protein BC1001_5660 [Burkholderia sp. CCGE1001] gi|323386944|gb|ADX59034.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 372 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 93/348 (26%), Positives = 174/348 (50%), Gaps = 7/348 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 29 ERVKKQKAASLALYIGLVLLALWVVRDFLPVVGWAGVLAIALWPLLRRVEGSRWLSGRTT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AV+ T+++ L ++P+ + E +L A + GI +P ++ +P G + Sbjct: 89 LIAVVLTLAIALLVVLPVGIGIAQALREAHDLSDWFKAAQETGIAMPDFIHRLPFGAREA 148 Query: 121 E-LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W +L+ P + +K + FG + FM++ LF ++ Sbjct: 149 EAWWQAYLAAP----LRDSAAMKGLHSTTVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQ 204 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +S L + F ++ + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 205 AGPRLSGALARGLQRGFGEDGAQLVERMAIAVRGTVSGLVVVGLGEGALLGVAYFVTGLP 264 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L +ITAI AM+P API+F +++L +G++ A L ++G++ +F+ + +RP Sbjct: 265 HVALLALITAIAAMLPFCAPITFGLAALWLFSQGSVAGAIGLLVFGSVVVFVAEHFVRPV 324 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + + Sbjct: 325 LIGSSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTDLVQ 372 >gi|28870542|ref|NP_793161.1| hypothetical protein PSPTO_3378 [Pseudomonas syringae pv. tomato str. DC3000] gi|28853790|gb|AAO56856.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 354 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWPRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V ++ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKNLLPHSIQALLDRLGMGDLEGLRDKITK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVALYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFLIGPLIAALFISSW 340 >gi|319945201|ref|ZP_08019463.1| permease [Lautropia mirabilis ATCC 51599] gi|319741771|gb|EFV94196.1| permease [Lautropia mirabilis ATCC 51599] Length = 433 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 148/348 (42%), Gaps = 5/348 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + L L L F++ ++ A+I+ P+ + + + + + I +V+ + Sbjct: 14 FLALVSLAFLAILLPFYSALMWAVILAMLFAPMQRALMRRMPQRANTATFITLGAVIMMV 73 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+P++ L + + ++ S++ + G + + + +PG + L P Sbjct: 74 IIPVIGLTMSLVNQGAQIYSRIRSGDLNFGAYLAKIIEAMPGWLHRMLDAQGLLDLPSIQ 133 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L+++ + F+ A G +D S ++ LFF RDG + Sbjct: 134 RRLADS--GSEIGQFLASQAVNIGQNTVDALASTGVLLYVLFFLLRDGGQLVAMFYR-AI 190 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + V+++T G +AI +G++ G W G+ + V+ A +++ Sbjct: 191 PLEDEPKNHLLGKFSAVVKATVKGNVAVAIVQGVLGGIILWALGIKGVILWSVVMAFLSL 250 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G+ + + +++Y L G + L +G + +VD LRP LVG K+P Sbjct: 251 LPAVGSGLIWGPIALYFLATGATWQGVVLLAYGVGVIGMVDNVLRPVLVGKNTKMPDYVV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 +GG+ GL G IGP++ AL W + ++ E++ Sbjct: 311 LVSTIGGMSLFGLNGFVIGPLIAALFMAAWDLYVAPDRDRDEEVHEAL 358 >gi|123442436|ref|YP_001006415.1| putative inner membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089397|emb|CAL12245.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 367 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 143/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 6 LRRFDLPKLMFGVIFIMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIWLQKILWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+I T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 66 LAAIIMTILLILLFVIPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSIPMVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ +L I ++ A+ G + L ++F I+ F Sbjct: 126 YSGWHSLIAGGGNLLIAKIQPYVGAAATWLVAQAAHIGYFLIHLALMVLFSILLYF---- 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 182 HGEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ I + G + I+L G+ T L +W I + +D LRP+ Sbjct: 242 YATLFTVLMFICCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCI-VGTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESITE 359 >gi|172062740|ref|YP_001810391.1| hypothetical protein BamMC406_3708 [Burkholderia ambifaria MC40-6] gi|171995257|gb|ACB66175.1| protein of unknown function UPF0118 [Burkholderia ambifaria MC40-6] Length = 355 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 140/350 (40%), Gaps = 5/350 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ + Q +++ + + + L F V I+ P+ ++ + Sbjct: 7 ESGHDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A+++ ++ + I+PL+F+ + E+ + ++ A + + +P Sbjct: 67 ALVSMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSRYFHDIIHALPTS--IQN 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L K+ T F A G + +S M+ +FF RDG Sbjct: 125 LLQKYGLSNIPGIQKKLTDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDG 184 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 185 GEIGRRVRR-SIPLDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGV 243 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + ++Y L G I+ L + + +VD LRP L Sbjct: 244 VLWGALMAFLSLLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNLLRPIL 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 304 VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 353 >gi|152980908|ref|YP_001355199.1| hypothetical protein mma_3509 [Janthinobacterium sp. Marseille] gi|151280985|gb|ABR89395.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 359 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 89/356 (25%), Positives = 154/356 (43%), Gaps = 8/356 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M P+ + + +I SL F L F+ V A ++ P Y + K + S Sbjct: 1 MNYPEIQQKTFLALLIAFSLAFIGILLPFYGAVFWAAVLAILFSPFYRKLLIKMNQRSNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWAS 120 A+ + + I+PL+ + + E L S + + + ++ +P W Sbjct: 61 AALTTLGICLVVVILPLVLISISLVHEATNLYSNIRSGQLNFSVYFEKVVAALP--TWVV 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 K + + G +FI + A G ++ +S M+ LFF RD Sbjct: 119 NQMDKFGLTNIATLQAKLSQAAVQGSEFITKQAISIGQNTFNFLISFTIMLYMLFFLLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I+ ++ L P + + + + IR+T G I+A +G + G A+W GV Sbjct: 179 GDKIAARIRQAAP-LNPDHKRTLFNNLTTAIRATVKGNIIVAAVQGALGGVAFWFLGVQG 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ A ++++P GA + + V+IY L+ G I+ L +G + + +VD LRP Sbjct: 238 ALLWGVLMAFLSLLPAVGAALIWVPVAIYFLLTGAIWQGVTLIAFGVLVIGLVDNILRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LVG LP VGG+ +GL G IGPV+ AL +W ++ + + Sbjct: 298 LVGKDTALPDFVVLISTVGGMALLGLNGFVIGPVIAALFMTLWDIFSSGKQKQEAE 353 >gi|186472140|ref|YP_001859482.1| hypothetical protein Bphy_3280 [Burkholderia phymatum STM815] gi|184194472|gb|ACC72436.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 361 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 8/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEES 58 M + + +++++L+ ++ F + A +I WP + + Sbjct: 14 MPNRRKMQRIASAALYAAMVVLALWVIRDFVPAIAWACVIAIALWPAFHRIEEHKFFKGR 73 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM- 117 ST +A + T+++ LF++P+ E +++ ++GIPVP ++ +P G Sbjct: 74 STLIATVLTIAIGLLFLLPVGIGIAQAASEAHDVIEWARGVQENGIPVPDFVQHLPFGAA 133 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W +LS P + +K + F FG + FM++ LF Sbjct: 134 QIGSWWQDNLSQP----LRDSPAMKGLHGGAVVTFGRHFGARAAHALMLFAFMLVTLFVI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ G +S +L F + + +R T G+ ++ IGEG +L AY L G Sbjct: 190 FQAGPKLSCELMKGVRRAFGYDGMHLFERMAAAVRGTVSGLVVVGIGEGALLLVAYMLTG 249 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTL 296 VP LG +TAI AM+P AP+ F ++++ + +G + A L ++G + +F+ + + Sbjct: 250 VPHAALLGFVTAIAAMLPFCAPVVFCGAALWIFVEQGALIPAIGLAVFGFVVVFVAEHFV 309 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 RP L+G +LPFL FG++GG T GLLGLF+GP LM ++ V+W E I Sbjct: 310 RPVLIGSSARLPFLLVLFGILGGAETFGLLGLFVGPALMTVLMVLWTEWI 359 >gi|188533650|ref|YP_001907447.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] gi|188028692|emb|CAO96554.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] Length = 379 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 80/359 (22%), Positives = 144/359 (40%), Gaps = 10/359 (2%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 QGI + +FI+ + + L +F+ +L A I+ P+ S + + ++ Sbjct: 4 QGISKGFFIFILAATTLGFFHILGPYFSAILWAAILAIIFHPLKSKIRKYCRDKNGLASL 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELW 123 I + + +PL + +E L S++ V ++ +P W Sbjct: 64 ITLFIICLIVFIPLAVVASSLAIEFNALYSRIQGDQTELTTVAASVVNHLP--DWLRHFL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + S + + G F G + + M+ LFF +DG Sbjct: 122 AENNLNDASAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFLLKDGAY 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L + V R+T G ++A+ +G + G A+W AG+ + Sbjct: 182 LVGMALDAIP-LSRFVKHHLFVKFAAVSRATVKGTVVVAVVQGTLGGIAFWFAGIQGSIL 240 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G + A +++IP G+ I + V +Y G + L + + + +VD LRP LVG Sbjct: 241 WGSLMAFLSLIPAVGSAIIWLPVVLYFFFSGAMIKGLLLTFFFVVVIGLVDNILRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 K+P +GG+ G+ G IGP++ AL W S K N +KI S+F Sbjct: 301 KDTKMPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRDHKGNTDKIDSDF 359 >gi|308185989|ref|YP_003930120.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] gi|308056499|gb|ADO08671.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] Length = 412 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 6/333 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ I V+ + L +F+P+L A I+ P+ + S+ + + A+I + Sbjct: 12 ILILAIATVAFFEVLSPYFSPILWAAILAVIFHPLKTWLRSRLGDRNGVAALITLFCICL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL + ++E + K+ ++Q L +P WA ++ Sbjct: 72 IVFTPLAIIASSLVVETNAVYHKLQTNSSQFPAVFADLLQHLP--RWAKHFLAENNLDNA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + G ++ A G + + M+ LFF +DG + + Sbjct: 130 EQIQQKLSSFALKGGQYVAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLILEA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++ I +G++ G A+W G+ + G + A + Sbjct: 190 LP-LSTYVKHHLMVKFAAVARATVKGTVVVGIVQGILGGLAFWFTGIDGSLLWGALMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 249 SLIPAVGSAIIWVPAAIFFFATGALWKGLFLVGFFVVIVGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ G+ G IGPV+ AL W Sbjct: 309 MILIATLGGMEIYGINGFVIGPVIAALFIACWN 341 >gi|194288785|ref|YP_002004692.1| hypothetical protein RALTA_A0641 [Cupriavidus taiwanensis LMG 19424] gi|193222620|emb|CAQ68623.1| conserved hypothetical protein, DUF20; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 394 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 144/357 (40%), Gaps = 7/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ F+SW Y+ Sbjct: 1 MSSGQLIEKIAAVFALIVLIGGSLLVLAPFTTALLWGAILAFSSWHPYTVLSRWLGNRRG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A+I + + + P ++ + +L + V + G+P +P WLS +P G + Sbjct: 61 LAALICVLLATVIVLGPFVYAGASFSAHLDDLAALVDRYMEQGLPQLPLWLSSLPYVGSY 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W ++ + + G + G LSII FFFY Sbjct: 121 LQNSWDSVINADSEMVANLRKLIAPVGHVLLGA-GLSIGAGLGQLALSIILA----FFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G L + + + + ++ G+ A + ++ G W+AGV Sbjct: 176 TGGEFAIAWLRAGMRRIAGERADHLLELAGSTVKGVVYGVLGTAFIQAVLAGIGLWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG +T ++++P G P+ + +++L G A L +WG + + D ++P Sbjct: 236 PGAAILGFVTFFLSVVPVGPPLVWLPAALWLYHTGATGWAIFLVVWGVGVVSMADNIVKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ +P + G++GG G LG+FIGP L+A+ + ++ + + ++ Sbjct: 296 LLISKGTGMPLIWIMLGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQGELQR 352 >gi|330882685|gb|EGH16834.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 321 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 7/308 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWVLARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGLLG 327 + G +G Sbjct: 314 LLAFGFIG 321 >gi|310767844|gb|ADP12794.1| hypothetical protein EJP617_31130 [Erwinia sp. Ejp617] Length = 372 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 143/355 (40%), Gaps = 6/355 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ L L+ L +F+ +L A I+ P+ S + + +++ + Sbjct: 8 KGFFIFILAITTLGFLHILGPYFSAILWAAILAIIFHPLKSKIGKYCGDRNGLASMLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHL 127 + + +PL + +E L +++ V ++ +P W ++ Sbjct: 68 IICLIVFIPLAVVASSLAVEFNALYNRIQANQTELTTVATSVVNHLP--EWLRHFLAENN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G F G + + M+ LFF +DG + Sbjct: 126 LTDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFLLKDGAYLVGM 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + V R+T G +A+ +G + G A+W AG+ + G + Sbjct: 186 ALDAIP-LSRFVKHHLFVKFAAVSRATVKGTVAVAVVQGTLGGIAFWCAGIQGSILWGSL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + V I+LL G + L + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W S + N ++I S+F Sbjct: 305 MPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRESRGNTDEIDSDF 359 >gi|171317803|ref|ZP_02906983.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] gi|171097027|gb|EDT41884.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] Length = 356 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + TV V L ++P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRFESDRWFRNRPTLIATVITVGVSLLVVLPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P +++ +P G ++ W +L HP + + T + Sbjct: 95 GQAISQEHDLRMWLHSIQDNGIPLPDFIARLPYGAAQITDWWQANLGHP----LHAGTAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG FM++ LF R G +S + F Sbjct: 151 HGATGEKFIAFGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGAMLHGARRAFGPGGG 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGAILGIAYALAGVPHAALLGLVTAVAAMLPFCAPIV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E + Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|238749448|ref|ZP_04610953.1| hypothetical protein yrohd0001_27650 [Yersinia rohdei ATCC 43380] gi|238712103|gb|EEQ04316.1| hypothetical protein yrohd0001_27650 [Yersinia rohdei ATCC 43380] Length = 367 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 140/346 (40%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +IL S + ++ F A ++ +WP+ + +I T+ ++ L Sbjct: 19 IFILIMILASFWVIQPFVMGFAWAGMVVIATWPLLIRLQNLLWGKRWLAVIIMTLLLVLL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P WL IP G W ++ + Sbjct: 79 FVIPIGLLVSSLVENSGPLIQWASSPSNLRMPDVTWLKTIPMVGDKLYSGWYTLIAGGGN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I + ++ A+ G + L ++F ++ F G + + Sbjct: 139 ALIAKVQPYIGAAVTWLVAQAAHVGYFLIHMALMLLFSVLLYF----HGEQVGLGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G LAG+ L V+ I Sbjct: 195 VRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLALAGIQYATLLTVLMFICC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W I + +D LRP+L+ +P + Sbjct: 255 VAQLGPLLILIPAIIWLYWTGDNTWGTILLVWSCI-VGTMDNVLRPYLIRMEADMPMILI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E + Sbjct: 314 LSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESLQE 359 >gi|327393717|dbj|BAK11139.1| UPF0118 inner membrane permease protein YdiK [Pantoea ananatis AJ13355] Length = 376 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 143/353 (40%), Gaps = 8/353 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ L I+ +I L+ ++ F A ++ +WP+ + Sbjct: 16 RQIDLPQMLFTLIFILLLIAACLWVVQPFILGFAWASMVVIATWPLMLKIQRLLWGRRSL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LFI+P+ L + +++ H +P WL+DIP G Sbjct: 76 AVIVMTILLLLLFIIPVALLVNSLIDNSAPVIAWATQG--HMLPTLSWLNDIPMVGEKLY 133 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + K ++ + + F A FG + + ++F ++ Y Sbjct: 134 ASYQKLVAGGGAAIMAKLQPYVGRTTGFFVAQAGHFGRFMIHLAVMLLFSVL----LYWR 189 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +Q + + + + +R+ LG+ + A+ +G++ G ++G+P Sbjct: 190 GEQAAQGIRHFAWRMAGRRGDAAVLLAGQAVRAVALGVVVTALVQGVLGGIGLAVSGIPY 249 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G + +YL G+ T L +W + +D LRP L Sbjct: 250 ATLLTVLMILCCLVQIGPLLVLVPAIVYLYWSGDTTWGTVLLIWSC-VVGTLDNILRPVL 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 309 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWMHEVPAPQ 361 >gi|161501878|ref|YP_049952.2| putative inner membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 370 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 6/347 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ L Sbjct: 20 VFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLVMTLLLILL 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F+VP+ L + L+S P WL+ IP G W L S Sbjct: 80 FVVPIAVLVSSVIDNSSALMSWGSRQENLSPPTLEWLTSIPLVGEKLFNSWQALLQSGGS 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ A+ G + L +IF + Y G ++++ + Sbjct: 140 GLFAKVQPYFGKTATWLVAQAAHVGRFLMHCSLMLIFSAL----LYYKGEAVAKAVRHFA 195 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 196 IRLGRERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFLCC 255 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W + +D +RP L+ LP L Sbjct: 256 LAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSC-VVGTIDNVIRPMLIRMGADLPMLLI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 315 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNLLSVN 361 >gi|172063209|ref|YP_001810860.1| hypothetical protein BamMC406_4180 [Burkholderia ambifaria MC40-6] gi|171995726|gb|ACB66644.1| protein of unknown function UPF0118 [Burkholderia ambifaria MC40-6] Length = 356 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + TV V L I+P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRFESERWFRNRPTLIATVITVGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P ++ +P G +E W +L HP + + + Sbjct: 95 GQAISQEHDLRMWLQSVQDNGIPLPDVIARLPYGAAQVTEWWQANLGHP----LHAGAAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG FM++ LF R G +S L F Sbjct: 151 HGASGEKFIAFGRQFGTKVAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGG 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPIV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E + Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|254428305|ref|ZP_05042012.1| conserved domain protein, putative [Alcanivorax sp. DG881] gi|196194474|gb|EDX89433.1| conserved domain protein, putative [Alcanivorax sp. DG881] Length = 371 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 90/356 (25%), Positives = 156/356 (43%), Gaps = 8/356 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+T ++ + R + ++ VS F ++ FFAP+ A I +P + +++ + Sbjct: 1 MRDTGISEKLEQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPFHKRLLARWPQ 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +A+ + + L ++P+L + + E L KV I + ++ I Sbjct: 61 RRNLVALFTLLLCVVLVVIPVLAVATSFVSEGVGLFQKVQSGE---IDLASYVDKIKHAF 117 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + T F+ + A G + L++ M+ FF Sbjct: 118 PGVQSLAERFDVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNTFQFFLNLGLMLYLAFFL 177 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RDG S+ L L K + +V R+T G ++AI +G + G +W G Sbjct: 178 IRDGDSMVAMLIRALP-LGDEREKLLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLG 236 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P + GV+ A++++IP GA + + V++YL G++ AT L L+G + +VD L Sbjct: 237 IPGALLWGVVMAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATILILFGVFVIGLVDNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 RP LVG KLP F +GG+ G+ G +GP+L AL W I E Sbjct: 297 RPILVGRDTKLPDYVVLFSTLGGLAMFGITGFAVGPLLAALFVAFWGIFIREFNEE 352 >gi|56461267|ref|YP_156548.1| PerM family permease [Idiomarina loihiensis L2TR] gi|56180277|gb|AAV82999.1| Predicted permease PerM family [Idiomarina loihiensis L2TR] Length = 348 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 145/350 (41%), Gaps = 7/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRE++ + ++ + + + L F+ + A ++ +P+ + Sbjct: 1 MRESL--ERRSFLLTLILVSIAFAWVLIPFWGAIFWACVVTVIFYPLQQKLKKTFGDKPN 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + ++P L + Y + E ++ ++ I + DI Sbjct: 59 RAALVTLLIALVIVVIPALGISYSFVQEGVSFYQRL---DEGKINPGKLFDDIQKAFPVI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S + +G F+ A G + +S+ MI FF RD Sbjct: 116 SDLLAQFDIKASDVREKISSGAVSGSKFLAEEALSIGQNTFSFIISLSLMIYLTFFLLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + L L +K+ +V R+T G ++AI +G + G + L G+P Sbjct: 176 GHLLIDLLVKALP-LGDERERKLFTKFAEVTRATVKGNIVVAIVQGTLGGIIFALLGIPG 234 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ A +++IP GA + + VSIYL GN T L +GAI + + D LRP Sbjct: 235 ALLWGVVMAFLSLIPAVGASLVWLPVSIYLYATGNWIAGTILVAYGAIVIGLADNVLRPV 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LVG KLP F +GG+ G+ G +GP++ AL V W + Sbjct: 295 LVGRDTKLPDYLVLFSTLGGLSLFGITGFVLGPLVAALFLVFWDIFMNEF 344 >gi|146310488|ref|YP_001175562.1| hypothetical protein Ent638_0826 [Enterobacter sp. 638] gi|145317364|gb|ABP59511.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 369 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 5/337 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +F+ VL A I+ P+ + S E + +++ V Sbjct: 8 KGFFILILAIVSLAFFDILAPYFSAVLWASILAVIFHPVKNKLRSMMGERNGLASLLTLV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + PL+ + +E+ + +K+ N Q V + +P WA H Sbjct: 68 IICLIVFTPLIVILSSLAIELNVVYTKLQHTNSQFPEVVASLFAHLP--EWARNFLVDHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + G ++ A G + +S MI LFF +DG + +Q Sbjct: 126 LDNAAQIQQKLSDAALKGGQYLAGSAFLIGKGTFGFAISFGIMIYLLFFLLKDGPYLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G++ G A+++AG+ + G + Sbjct: 186 ILD-SLPLSDFVKQHLFAKFAAVSRATVKGTVVVALVQGILGGIAFYIAGIDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +++L ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAVFLFATQQLWQGFFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILISTLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|254711673|ref|ZP_05173484.1| hypothetical protein BpinB_15754 [Brucella pinnipedialis B2/94] Length = 352 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 118 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G+ G +WL G+ + + Sbjct: 178 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMNGGVTFWLLGIEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LV Sbjct: 237 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|170702831|ref|ZP_02893681.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|170132267|gb|EDT00745.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] Length = 356 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T V L I+P+ Sbjct: 35 WVIRDFIPAIAWACVIAIALWPLLKRFESERWFRNRPTLIATVITAGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P ++ +P G +E W +L HP + + + Sbjct: 95 GQAISQEHDLRMWLQSIQDNGIPLPDVIARLPYGATQVTEWWQANLGHP----LHAGAAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG FM++ LF R G +S L F Sbjct: 151 HGASGEKFIAFGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGG 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPIV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E + Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|311693484|gb|ADP96357.1| protein belonging to uncharacterized protein family UPF0118 [marine bacterium HP15] Length = 371 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 5/351 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + L ++ +K FF P+ A+ I P+ K + A+I Sbjct: 8 RTFLALLVGVSLAFVFLMKPFFGPIFWAVAIALIFHPVQQLLERKLGDRPNVNALITLCI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + ++P+L L + E L ++ I ++ + A + + Sbjct: 68 CMFIVVIPVLVLVTSLVAEGVALYQQIQSGE---IRPGEYIDRVNQSFPAIQAFLAQFDI 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + G F+ R A G + L + M+ FF RDG ++ + + Sbjct: 125 SFAELRDRAVSIFVGGSQFLGRQALGVGQNTFQFFLGLALMVYLAFFLLRDGRALVELMI 184 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + +V R+T G +IAI +G + G +W+ G+ + GV+ A Sbjct: 185 RALP-LGDERERLLFAKFAEVTRATVKGNLLIAIIQGALGGLIFWILGISGALLWGVVMA 243 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I++++P GA + + +IYL G++ A L +G + + + D LRP LVG KLP Sbjct: 244 IVSLLPAVGAALVWVPAAIYLAAVGDVVEAVVLTAFGVVVIGLADNLLRPVLVGRDTKLP 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ G+ G +GP++ AL W I E + +++ Sbjct: 304 DYIVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFSEEAHRPAAS 354 >gi|259908241|ref|YP_002648597.1| hypothetical protein EpC_15860 [Erwinia pyrifoliae Ep1/96] gi|224963863|emb|CAX55365.1| Putative membrane protein [Erwinia pyrifoliae Ep1/96] gi|283478172|emb|CAY74088.1| putative AI-2E family transporter [Erwinia pyrifoliae DSM 12163] Length = 372 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 144/355 (40%), Gaps = 6/355 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ L L+ L +F+ +L A I+ P+ S + + +++ + Sbjct: 8 KGFFIFILAITTLGFLHILGPYFSAILWAAILAIIFHPLKSKIGKHCGDRNGLASMLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHL 127 + + +PL + +E L +++ V ++ +P W ++ Sbjct: 68 IICLIVFIPLAVVASSLAVEFNALYNRIQANQTELTTVASSVVNHLP--EWLRHFLAENN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G F G + + M+ LFF +DG + Sbjct: 126 LTDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFLLKDGAYLVGM 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + V R+T G ++A+ +G + G A+W AG+ + G + Sbjct: 186 ALD-AIPLSRFVKHHLFVKFAAVSRATVKGTVVVAVVQGTLGGIAFWCAGIQGSILWGSL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + V I+LL G + L + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-ESIMAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W S + N ++I S+F Sbjct: 305 MPDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRDHRGNTDEIDSDF 359 >gi|153010748|ref|YP_001371962.1| hypothetical protein Oant_3427 [Ochrobactrum anthropi ATCC 49188] gi|151562636|gb|ABS16133.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 355 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 143/351 (40%), Gaps = 7/351 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L +++ VL A+I+ P+ A+ Sbjct: 1 MSVQRASFYILLALVTIAFAWLLLPYYSAVLWAVILAVVFSPVQQRLERLLGGRKNIAAL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + ++S I G + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVQEGNSLYQRLSSRE---FDLNSYISRILGALPDSLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T+ + + G FG L + + M+ LFF +RDG Sbjct: 118 LTRFELGDFAEWRARISSAIMQGSQLFAGKLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G + G +W GV + + Sbjct: 178 DLGRKIRQAIP-LNDDYTRQFLEKFIAVIRATVKGNIIIAIIQGTIGGVTFWSLGVEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ ++M+P GA + + + + G + L G + +VD LRP LV Sbjct: 237 LWGVLMTFLSMLPAVGAALVWVPAAAWFFASGEWISGGILVFVGVFVIGLVDNLLRPPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G ++P VGG+ +G+ G +GP++ A+ W K N Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVVGPLIAAMFIAAWSLLAEEQKGN 347 >gi|115358452|ref|YP_775590.1| hypothetical protein Bamb_3702 [Burkholderia ambifaria AMMD] gi|115283740|gb|ABI89256.1| protein of unknown function UPF0118 [Burkholderia ambifaria AMMD] Length = 356 Score = 218 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ T +A + TV V L I+P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRLESERWFRNRPTLIATVITVGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +L + +GIP+P ++ +P G +E W +L HP + + + Sbjct: 95 GQAIAQEHDLRMWLQSVQDNGIPLPDVIARLPYGAAQVTEWWQANLGHP----LHAGAAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG FM++ LF R G +S L F Sbjct: 151 HGASGEKFIAFGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGG 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPIV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 T GL+GLF+GP LM ++ ++W E + Sbjct: 331 TFGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|254248847|ref|ZP_04942167.1| hypothetical protein BCPG_03698 [Burkholderia cenocepacia PC184] gi|124875348|gb|EAY65338.1| hypothetical protein BCPG_03698 [Burkholderia cenocepacia PC184] Length = 353 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 143/350 (40%), Gaps = 5/350 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L F V I+ P+ ++ + Sbjct: 5 DSGQDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLA 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A++ ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 65 ALVTMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLL 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P K L++ F A G + +S M+ +FF RDG Sbjct: 125 QKYGLTNIPGIQKKLTDG--AAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 183 GEIGRRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGV 241 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + ++Y L+ G I+ L + + +VD LRP L Sbjct: 242 VLWGALMAFLSLLPAIGASLVWVPAALYFLMIGAIWKCVILVAFCVGVIGLVDNLLRPIL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 302 VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 351 >gi|254253542|ref|ZP_04946859.1| hypothetical protein BDAG_02809 [Burkholderia dolosa AUO158] gi|124898187|gb|EAY70030.1| hypothetical protein BDAG_02809 [Burkholderia dolosa AUO158] Length = 350 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 142/348 (40%), Gaps = 5/348 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + +++ + + + L F V I+ P+ F ++ + A++ Sbjct: 6 DHEKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWFAARFGKRRNVAALLT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 66 LTLIVLIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDIIHALPTSIQHLLAKYG 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P K L+E F A G + +S M+ +FF RDG I Sbjct: 126 LTNIPGIQKKLTEG--AAQISQFAAAQALSIGQNTFQFIVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G++ G +W+ G+ V G Sbjct: 184 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L G I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWVPAALYFLATGAIWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 K+P +GG+ G+ G IGP++ AL W + + Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQSE 350 >gi|330994022|ref|ZP_08317952.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758968|gb|EGG75482.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 399 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 176/350 (50%), Gaps = 8/350 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--T 60 ET + + +F +L++LY ++GF ++ I SWP+Y+ + + Sbjct: 52 ETQRTQRVARALLALFFVLLALYTVRGFLPSLIWGCIFAIASWPLYARARQRWPSRAHQA 111 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW-A 119 L V T+++ +F+ PL E + ++ + A GIPVP W+S +P G Sbjct: 112 MLPVAFTLAIALIFLGPLALFGLEAGREAEGVLRLLNDARHSGIPVPPWISRLPYGQQTI 171 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W HL P + L + I + + G L L IF I+ LFF + Sbjct: 172 ETWWNDHLKDPADI----SALLGSMNIGQGMKVTQQLGSQVLHRGLLFIFAILTLFFLLK 227 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG ++ +Q ++ F ++I+ + + + G+ ++ IGEG+++G AY +AG P Sbjct: 228 DGDAVIRQSLNVSRRAFGKRGERIALQMIASVHGSVSGLVLVGIGEGMLMGLAYLVAGAP 287 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRP 298 GVITAI AMIP A I+ AV++ LL+ G + A + L+G +F+ D +RP Sbjct: 288 HPFLFGVITAIAAMIPFCALIAIGAVALLLLVNTGAVLTAVAIVLFGLAVIFLADHLVRP 347 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+GG +LPFL G++GG + LLGLF+GP +MA++ ++W A Sbjct: 348 ALIGGTTQLPFLWVLMGILGGAESWSLLGLFVGPAIMAVLHMLWLNWSRA 397 >gi|271500197|ref|YP_003333222.1| hypothetical protein Dd586_1651 [Dickeya dadantii Ech586] gi|270343752|gb|ACZ76517.1| protein of unknown function UPF0118 [Dickeya dadantii Ech586] Length = 366 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 137/359 (38%), Gaps = 11/359 (3%) Query: 1 MRETMLNPQGIMRWM-----IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK 55 MR++ + R + I +I+ + ++ F A ++ +WP+ Sbjct: 1 MRQSQSQRFDLARILFSLLFIGIMIIACFWVVQPFILGFAWASMVVIATWPLLIRLQQIL 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP- 114 + ++ T+ ++ LF+ P L + L++ V + P WL IP Sbjct: 61 WGYRSLAVIVMTILLVLLFVFPTSILVSSVIDNASNLINWVSAQGRMTPPSLDWLQSIPL 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G W + ++ A+ G + L ++F ++ Sbjct: 121 VGAKLHSSWHALAHSGGPALMAKIQPYIGQTASWVVSQAAHVGRFLMHCALMVLFSVL-- 178 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 Y G ++ + L + + IR+ LG+ + AI + ++ G Sbjct: 179 --LYSKGDQVALGVRRFAIRLGGQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLA 236 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 LAG+P L V+ + + G I+L G+ T L +W + +D Sbjct: 237 LAGIPYTTLLTVLMFLSCVAQIGPLTVLVPAIIWLYWSGDTTWGTVLLVWSC-VVGTLDN 295 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +RP L+ LP L G++GG+ G++GLFIGPV++A+ + + A E + Sbjct: 296 IIRPLLIRMGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKASPEPQ 354 >gi|73542361|ref|YP_296881.1| hypothetical protein Reut_A2676 [Ralstonia eutropha JMP134] gi|72119774|gb|AAZ62037.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 388 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 78/352 (22%), Positives = 143/352 (40%), Gaps = 7/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ F+SW Y+ + Sbjct: 1 MSSGQLIEKIAAVFALVVLIGGSLLVLAPFTTALLWGAILAFSSWYPYTVLARWLGNRRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A+I V + + P ++ + +L + V GIP +P WLS +P G + Sbjct: 61 LAALICVVLAAVIVLGPFVYAGASFSAHIDQLSALVDRYIDQGIPQLPDWLSSLPYVGGY 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + + + + G + G LSII FFFY Sbjct: 121 LQTSWERLIHADSEMVANVRKLIAPVGHALLGA-GLSVGAGLGQLALSIILA----FFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G L + + + + ++ G+ A + ++ G W+AGV Sbjct: 176 TGGEYAIDWLRAGMRRIAGERADHLLALAGSTVKGVVYGVLGTAFIQAVLQGIGLWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG +T +++IP G P+ + +++L G A L +WG + + D ++P Sbjct: 236 PAAAILGFVTFFLSVIPVGPPLVWLPAALWLYHGGETGWAIFLVVWGVAVVGMADNVVKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ +P + G++GG G LG+FIGP L+A+ + ++ + + Sbjct: 296 LLISKGTGMPLIWIMMGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQ 347 >gi|299533519|ref|ZP_07046896.1| hypothetical membrane protein [Comamonas testosteroni S44] gi|298718477|gb|EFI59457.1| hypothetical membrane protein [Comamonas testosteroni S44] Length = 359 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 139/333 (41%), Gaps = 6/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ + + ++ P++ + + T A+ + + + I+PL + Sbjct: 2 VLEEYAVAIFWGVVFAIVFAPLHRKLLMRMPNKPTLAALATLLISLVMVILPLSLIGLSL 61 Query: 86 MLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + ++ N G V + + +P W + K + + Sbjct: 62 IKETAAIYDRISSGNLSAGSYVEQVFNALP--SWLTPWMEKLHLGTLEEIQTKLSNIALQ 119 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A G L + + M+ +FF RDG + ++ + L P + ++++ Sbjct: 120 ASKLAATKAVGLGQNTLGFVVGFGVMLYLIFFLLRDGKELVARIWA-ATPLAPEHKRELA 178 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 VIR+T G +A +G + G +W+ G+ V V+ A ++++P GA + + Sbjct: 179 IKFITVIRATVKGNLAVAAAQGALGGLIFWILGIQGAVLWAVVMAFLSLLPAVGAGLVWG 238 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+IY L G + L +G + + +VD LRP LVG K+P +GG+ Sbjct: 239 PVAIYFLATGAVTKGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALF 298 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GL G +GP + AL W E ++E +EK+ Sbjct: 299 GLSGFVLGPAIAALFMAAW-ELFATMQEQEEKL 330 >gi|261319296|ref|ZP_05958493.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261298519|gb|EEY02016.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] Length = 354 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 120 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G+ G +WL G+ + + Sbjct: 180 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMNGGVTFWLLGIEAAL 238 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LV Sbjct: 239 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLV 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 350 >gi|170736099|ref|YP_001777359.1| hypothetical protein Bcenmc03_3717 [Burkholderia cenocepacia MC0-3] gi|169818287|gb|ACA92869.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 350 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 143/350 (40%), Gaps = 5/350 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L F V I+ P+ ++ + Sbjct: 2 DSGQDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A++ ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 62 ALVTMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLL 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P K L++ F A G + +S M+ +FF RDG Sbjct: 122 QKYGLTNIPGIQKKLTDG--AAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 180 GEIGRRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGV 238 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + ++Y L+ G ++ L + + +VD LRP L Sbjct: 239 VLWGALMAFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPIL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 299 VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 348 >gi|296101461|ref|YP_003611607.1| hypothetical protein ECL_01097 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055920|gb|ADF60658.1| hypothetical protein ECL_01097 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 369 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 70/337 (20%), Positives = 144/337 (42%), Gaps = 5/337 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ + L +F+ +L A I+ P+ + + + + +++ Sbjct: 8 KGFFIFILALVTWAFFDVLSPYFSAILWAAILTVIFNPVKNKLRAALGDRNGLASLLTIG 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHL 127 + + +PL+ +F +E+ + +K+ N V + + +P WAS H Sbjct: 68 IICLIVFIPLMVIFSSLAIELNVVYTKLQENNTQFPEVVASIFNHLP--DWASGFLADHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LTNAAQIQKKLSDVALQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPFLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G + G A+ +AG+ + G + Sbjct: 186 ILD-SLPLSDFAKQHLFAKFVGVSRATVKGTAVVAVVQGTLGGIAFAIAGIDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P G+ I + +I+L I+ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLVPAVGSAIVWVPAAIFLFATHQIWQGLFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILISTLGGMELYGINGFVIGPLIAALFIACWN 341 >gi|306845823|ref|ZP_07478391.1| transmembrane protein [Brucella sp. BO1] gi|306273715|gb|EFM55553.1| transmembrane protein [Brucella sp. BO1] Length = 352 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 150/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINSYIARIMAALPESLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 118 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 178 DVGKKIRR-AIPLSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L L G + + +VD LRP LV Sbjct: 237 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVLVGVLVIGLVDNLLRPPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|163857030|ref|YP_001631328.1| hypothetical protein Bpet2718 [Bordetella petrii DSM 12804] gi|163260758|emb|CAP43060.1| putative membrane protein [Bordetella petrii] Length = 360 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 142/340 (41%), Gaps = 5/340 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + L F+ V I+ P++ +K + A+ + V+ L IVP+ Sbjct: 20 IAFGWVLWPFYGAVFWGAILAIIFAPVHRRIAAKLVKRRNLAALCTLLLVLLLVIVPVTL 79 Query: 81 LFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + E L +V N G+ + L +P L T+ + T Sbjct: 80 ITGSLVQEGANLYQRVKSGNLNFGVYFQQVLDALPAS--LHSLLTRFGMADITSLQDKLT 137 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 G ++ A G + +S M+ LFF RDG +S +L + L + Sbjct: 138 AGAMRGSQYLATQAFNIGQDTFQFLISFGIMLYLLFFLLRDGSLLSARLRA-AIPLSDSR 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + R VIR+T G +A +G + G +++ G+ V GV+ A ++++P GA Sbjct: 197 KIHLLRKFTTVIRATVKGNIAVAAAQGALGGVIFYVLGIQGPVLWGVVMAFLSLLPAIGA 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + V++Y L+ G + L L+G + + +VD LRP LVG KLP +G Sbjct: 257 GLIWVPVAVYFLVTGATWQGVALILYGVLVIGMVDNVLRPLLVGKDTKLPDYVVLISTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+ GL G IGP++ AL W E + + Sbjct: 317 GMALFGLNGFVIGPLIAALFITCWDLFTSDFVEPAARDDT 356 >gi|227111729|ref|ZP_03825385.1| putative inner membrane protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 369 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 138/347 (39%), Gaps = 6/347 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ L Sbjct: 20 VFITIMIIACFWVVQPFILGFAWACMVVIATWPLLIKFQALLWGRRSLAVLVMTLLLILL 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FIVP+ L + L+S P WL+ IP G W L S Sbjct: 80 FIVPIAVLVSSVVENSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQALLQSGGS 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ A+ G + L +IF + Y G ++++ + Sbjct: 140 GLFAKVQPYFGKTATWLVAQAAHVGRFLMHCSLMLIFSAL----LYYKGEAVAKAVRHFA 195 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 196 IRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFLCC 255 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G I+L G+ T L +W + +D +RP L+ LP L Sbjct: 256 LAQLGPLPVLIPAIIWLYWTGDNTWGTILLVWSC-VVGTIDNVIRPVLIKMGADLPMLLI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G++G+FIGPV++A+ + + I E + +S N Sbjct: 315 LSGVIGGLLAFGMIGIFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 361 >gi|283784810|ref|YP_003364675.1| putative outer membrane protein [Citrobacter rodentium ICC168] gi|282948264|emb|CBG87835.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 370 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 150/356 (42%), Gaps = 8/356 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++++ + L +F+ +L A I+ +P+ + + + + +++ Sbjct: 8 KGFFLFLLVVVTWAFFDVLSPYFSAILWAAILTVIFYPVKNKLRTALGDRNGLASLLTLG 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH 126 + + +PL + E+ + K+ + P ++ + M WA E H Sbjct: 68 IICLIVFIPLALILSSLAFELNVVYVKL---QNNNAQFPEVIASLFAHMPDWAREFLADH 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G ++ A G + +S M+ LFF +DG + + Sbjct: 125 NLDSAAEIQQKLSEVALKGGQYLAGSAFLIGKGTFGFAISFGVMLYLLFFLLKDGPFLVR 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ L + + V R+T G ++AI +G + G A+++AG+ + G Sbjct: 185 QILD-SLPLSNFVKQHLFAKFAGVSRATVKGTVVVAIVQGTLGGIAFYIAGIEGSILWGA 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A +++IP G+ I + +I+L ++ + + + + +VD LRP LVG Sbjct: 244 LMAFLSLIPAVGSAIVWGPAAIFLFSTQQLWQGFFIVGFFVVVVGLVDNILRPILVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 K+P +GG+ G+ G IGP++ AL W S + N E++ F Sbjct: 304 KMPDYLILITTLGGMEIYGINGFVIGPLVAALFIACWNILSGRDHEGNAEELDKEF 359 >gi|330810817|ref|YP_004355279.1| hypothetical protein PSEBR_a3885 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378925|gb|AEA70275.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 4/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ML + M +++ + + ++ L F+ V A+I+G P+ K Sbjct: 1 MNRKMLQNKAQM-LLLVLVTIAFIWILLPFYGAVFWAVILGIVFAPMQRRLQLKFGWHRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + I+P++ + + E L + D + Sbjct: 60 VTSLFTLSICVVCAILPVIIISTLLVQEGAALYKSLESGELDIADYLARFKDALPPYFQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L + L+ G +F A FG + +S MI LFFF RD Sbjct: 120 LLDRFGLGNLNGLRDKI-VKSAMQGSEFFATQAFSFGQGTFQFLVSFFVMIYLLFFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++AI +G + G +W+ G+P+ Sbjct: 179 GAELVRKVRTAVP-LAEHQKRRLQLKFNRVVRATVKGNLLVAISQGALGGLIFWILGIPT 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA + + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 VLPWAVLMAFLSLLPAVGAGLVWAPVAVYFLLSGAIWQGVVLTLFGVFVIGLVDNFLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVG K+P +GG+ GL G IGP++ AL W + Sbjct: 298 LVGKDTKMPDYMVLVSTLGGLAVFGLNGFVIGPLIAALFMSSWALFVETTPR 349 >gi|330899208|gb|EGH30627.1| hypothetical protein PSYJA_17246 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 319 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 7/306 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G LWT + + Sbjct: 79 GFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R A + G L+ LSI+F FFFYRDG ++ + SL E L Sbjct: 139 HLGQVGNWILARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLERLIGER 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + ++ + +AG+P + LG++T + ++IP G P Sbjct: 194 AQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLIPMGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L+ +G A L +WG + VD L+P+L+ LP + G+ GG Sbjct: 254 LVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGG 313 Query: 320 VRTMGL 325 + G Sbjct: 314 LLAFGF 319 >gi|317047887|ref|YP_004115535.1| hypothetical protein Pat9b_1663 [Pantoea sp. At-9b] gi|316949504|gb|ADU68979.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 370 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 72/350 (20%), Positives = 141/350 (40%), Gaps = 10/350 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I+ +I+ L+ ++ F A ++ +WP+ + V T+ ++ LF Sbjct: 19 FILIMIVACLWVVQPFILGFAWASMVVIATWPLMIKLQRLLWGRRSLAVVAMTILLLLLF 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I+P+ L + +++ +P WL ++P G + K + S Sbjct: 79 IIPIAVLVNSLIDNSAPVIAWATQG-HLAVPQLDWLKEVPMVGDKLFSSYHKLVDGGGSA 137 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + F A FG L L ++F ++ Y G + Q + Sbjct: 138 IMSKLQPYIGRTTGFFVAQAGHFGRFMLHLALMLLFSVL----LYWRGEQVGQGIRHFAY 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + IR+ LG+ + A+ +G++ G ++G+P L V+ + + Sbjct: 194 RMGGRRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAISGIPYATLLTVVMILSCL 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G I I+L G+ T L +W + +D LRP L+ LP + Sbjct: 254 VQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSC-VVGTLDNVLRPMLIRMGADLPMILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAIKENKEKISSNF 360 G++GG+ G++GLFIGPV++A+ + +W A ++ E + Sbjct: 313 SGVIGGLVAFGMIGLFIGPVVLAVSYRLVSVWMHEAPAPDDDPETVVEEL 362 >gi|93005128|ref|YP_579565.1| hypothetical protein Pcryo_0297 [Psychrobacter cryohalolentis K5] gi|92392806|gb|ABE74081.1| protein of unknown function UPF0118 [Psychrobacter cryohalolentis K5] Length = 379 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 92/347 (26%), Positives = 173/347 (49%), Gaps = 7/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +++ + ++ ++ F P L A I+ + ++PIY+ F + SS F A I T Sbjct: 12 QRLLAITLLVVLFVLCFQVVQFFIVPALWAAILAYVTFPIYNFFHQRVRFSSNFSAAIMT 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTK 125 VS+ + VPL+ + E L+S +V + G + VP + D+P G ++ + Sbjct: 72 VSITLMIGVPLVAGIFILQQEALSLISNLVYRIKVGYLDVPDSVKDLPIIGQQVKDVLWR 131 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +P+ +++++ + + + ++ LFFFYRDG S+ Sbjct: 132 INKNPEGTLEAFRLWVQSHLY-----YGKIAFDVVFSSLAKLGMALMTLFFFYRDGTSLV 186 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +Q+ ++ V R+ G+ + A+ + L+ G Y+ A PS + + Sbjct: 187 RQIRQALRNIIGNRIDGYIDSVGTTTRAVVYGIGLTALAQALLAGIGYYFASAPSPILMT 246 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T I+A+IP G P + VS++LL +G+ L LWG + + VD +RP ++ G Sbjct: 247 IVTFIIALIPFGTPFVWGGVSLWLLSQGHTVEGIGLALWGILVISWVDNLIRPIVISGAT 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I K + Sbjct: 307 KIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIGLAVWREWISQHKND 353 >gi|170721039|ref|YP_001748727.1| hypothetical protein PputW619_1855 [Pseudomonas putida W619] gi|169759042|gb|ACA72358.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 354 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 151/343 (44%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M +T L + + ++ + + + L ++ + A+I+G P+ + + + Sbjct: 1 MNQTALQNKALA-VLLALVTIAFGWILLPYYGAIFWAVILGILFAPLQRNLLMRFGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + + + I+P++ + E L ++ ++ Sbjct: 60 LAAATTLLICLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVERGMNMLPPFMQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + + + L+ + T G + A FG ++ +S M+ LFFF R+ Sbjct: 120 SLDSMGMGNLEGLRDKITKW-ATQGSQILATQAFSFGQGTFEFLISFGIMLYLLFFFLRE 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ L L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GADVARRV-RLAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P GA I + V+ Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWAVMMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVILTAFGVLVIGLVDNLLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG ++P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFMSSW 340 >gi|206578196|ref|YP_002237378.1| hypothetical protein KPK_1525 [Klebsiella pneumoniae 342] gi|206567254|gb|ACI09030.1| putative membrane protein [Klebsiella pneumoniae 342] Length = 369 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 140/337 (41%), Gaps = 5/337 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ V Sbjct: 8 KGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALLTIV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + PL + E+ + SK+ + Q V ++ +P WA +H Sbjct: 68 IICLIVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLIAHLP--DWARGFLAEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + ++ A G + +S M+ LFF +DG + Sbjct: 126 LDSAQQIQQQLSDVALKSGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLV-L 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 185 LTLESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +IYL G ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|116691904|ref|YP_837437.1| hypothetical protein Bcen2424_3807 [Burkholderia cenocepacia HI2424] gi|116649904|gb|ABK10544.1| protein of unknown function UPF0118 [Burkholderia cenocepacia HI2424] Length = 353 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 143/350 (40%), Gaps = 5/350 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q +++ + + + L F V I+ P+ ++ + Sbjct: 5 DSGQDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLA 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A++ ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 65 ALVTMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLL 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P K L++ F A G + +S M+ +FF RDG Sbjct: 125 QKYGLTNIPGIQKKLTDG--AAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 183 GEIGRRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGV 241 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + ++Y L+ G ++ L + + +VD LRP L Sbjct: 242 VLWGALMAFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPIL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 302 VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 351 >gi|170701167|ref|ZP_02892139.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|171317430|ref|ZP_02906622.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] gi|170133910|gb|EDT02266.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|171097385|gb|EDT42228.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] Length = 350 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 138/346 (39%), Gaps = 5/346 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + + L F V I+ P+ ++ + A+++ Sbjct: 6 DHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVS 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P L K Sbjct: 66 MSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSRYFHDIIHALP--TSIQNLLQK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T F A G + +S M+ +FF RDG I Sbjct: 124 YGLSNIPGIQKKLTDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G + G +W+ G+ V G Sbjct: 184 RRVRR-SIPLDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L G I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+P +GG+ G+ G IGP++ AL W + + Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 348 >gi|283833290|ref|ZP_06353031.1| putative membrane protein [Citrobacter youngae ATCC 29220] gi|291070927|gb|EFE09036.1| putative membrane protein [Citrobacter youngae ATCC 29220] Length = 369 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 144/348 (41%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ + L +F+ +L A I+ P+ + S E + ++I Sbjct: 8 KGFFIFILAVVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNGLASLITIA 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH 126 + + +PL+ + +E+ + +K+ Q+ P ++ I + WA +H Sbjct: 68 IICLIVFIPLMVILSSLAIELNVVYTKL---QQNDTQFPEVVTSILSYLPGWARGFLAEH 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G ++ A G + +S M+ LFF +DG + + Sbjct: 125 NLDNAAEIQKKLSNIALQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVR 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ L + + V R+T G ++A+ +G++ G A+ + + V G Sbjct: 185 QILD-SLPLSDFAKQHLFAKFVGVTRATVKGTAVVALVQGILGGIAFAIVDIDGSVLWGA 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P G+ I + +I+L ++ + + I + +VD LRP LVG Sbjct: 244 LMAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGLVDNILRPLLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 K+P +GG+ G+ G IGP++ AL W E Sbjct: 304 KMPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWNLFSGRDHEGN 351 >gi|156934268|ref|YP_001438184.1| putative inner membrane protein [Cronobacter sakazakii ATCC BAA-894] gi|156532522|gb|ABU77348.1| hypothetical protein ESA_02098 [Cronobacter sakazakii ATCC BAA-894] Length = 375 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 152/361 (42%), Gaps = 10/361 (2%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ M PQ ++ + + +I+ L+ ++ F A + +WP+ Sbjct: 7 LRQPMDVPQILLSVLFLSVMIIACLWIVQPFILGFAWAGTVVIATWPLLLRLQKMLWGRR 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + ++ LF++P+ L + + + + + IP WL+ IP Sbjct: 67 SLAVLVMVLILIMLFVIPVALLVNSLVDSSGPFIHWL-TSGKMTIPDLAWLNSIPYIGNK 125 Query: 120 SELWTKHL--SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L +L S ++ +L T FI + A+ G + + L ++F + Sbjct: 126 LYLGWHNLVESGGSAIMAKVRPYLGTTTGWFIGQ-AAHLGRLLMHCGLMLLFSAL----L 180 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y G ++ + L + + IR+ LG+ + A+ +G++ G ++G Sbjct: 181 YWRGEQVAYGIRHFAIRLASKRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAISG 240 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P L V+ + ++ G I+L G+ T L +W A + +D +R Sbjct: 241 IPYATLLTVVMILSCLVQLGPLPVLVPAIIWLYWSGDATWGTVLLIWSA-VVGTLDNIIR 299 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + ++ Sbjct: 300 PMLIRMGADLPMVLILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSVWVREAPLPEDDSE 359 Query: 358 S 358 + Sbjct: 360 T 360 >gi|134292899|ref|YP_001116635.1| hypothetical protein Bcep1808_4190 [Burkholderia vietnamiensis G4] gi|134136056|gb|ABO57170.1| protein of unknown function UPF0118 [Burkholderia vietnamiensis G4] Length = 350 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 138/346 (39%), Gaps = 5/346 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 6 DHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + V + +P L K Sbjct: 66 LSLIILIVILPLVFVAGTLVQEIAYVYQELKDAPPNYSKYVHDIIQALP--TSIQHLLQK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T F A G + +S M+ +FF RDG I Sbjct: 124 YGLTNVPGIQKKLTDGAAQISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G + G +W+ G+ V G Sbjct: 184 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L G ++ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVGFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+P +GG+ G+ G IGP++ AL W A + Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQ 348 >gi|296116563|ref|ZP_06835173.1| hypothetical protein GXY_12188 [Gluconacetobacter hansenii ATCC 23769] gi|295976775|gb|EFG83543.1| hypothetical protein GXY_12188 [Gluconacetobacter hansenii ATCC 23769] Length = 379 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 102/349 (29%), Positives = 171/349 (48%), Gaps = 7/349 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SS 59 RET + + +F ++++LY ++GF ++ I SWP+Y ++ Sbjct: 32 RETQRAQRVARGLLALFFVVMALYTVRGFLPSLIWGGIFAIASWPLYVRARTRWHAATHQ 91 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW- 118 L T+ + +F+VP+ + + ++ + A Q G+PVP+W+ +P G Sbjct: 92 LLLPAAFTLGIALIFLVPVTLFGLEAARDAEGVLHLLNNARQSGMPVPQWIDHLPIGAQG 151 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W HL P L + I + + G + IF I+ LFF Sbjct: 152 LRAWWESHLQDPDDF----SALLGSLRIGQSVKMTQQVGTQLAHRGILFIFSILTLFFLL 207 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG ++ +Q + F ++I+ + I T G+ ++ +GEG+V+G AY +AG Sbjct: 208 KDGDAVIRQCLVVSRRAFGKRGERIALQIIASIHGTVAGLVLVGMGEGVVMGLAYLIAGA 267 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P GV+TA+ AMIP A I+ VS LLIKG+ A + L G +F+ D +RP Sbjct: 268 PHAFLFGVVTAVAAMIPFCAMIAIGIVSTLLLIKGSAVIAIVIMLVGLAVIFLADHLVRP 327 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+GG +LPFL G++GG + LLGLF+GP +MA++ ++W+ Sbjct: 328 ALIGGSTQLPFLWVLTGILGGAESWNLLGLFVGPAIMAVLHMLWRNWTR 376 >gi|227327021|ref|ZP_03831045.1| putative inner membrane protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 369 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 138/347 (39%), Gaps = 6/347 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ F + + ++ T+ ++ L Sbjct: 20 VFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLVMTLLLILL 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FIVP+ L + L+S P WL+ IP G W L S Sbjct: 80 FIVPIAVLVSSVVDNSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQALLQSGGS 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ A+ G + L +IF + Y G ++++ + Sbjct: 140 GLFAKVQPYFGKTATWLVAQAAHVGRFLMHCSLMLIFSAL----LYYKGEAVAKAVRHFA 195 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G L+G+P L V+ + Sbjct: 196 IRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLLTVLMFLCC 255 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G I+L G+ T L +W + +D +RP L+ LP L Sbjct: 256 LAQLGPLPVLIPAIIWLYWTGDTTWGTILLVWSCF-VGTIDNIIRPVLIRMGADLPMLLI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG+ G++G+FIGPV++A+ + + I E + +S N Sbjct: 315 LSGVIGGLLAFGMIGIFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 361 >gi|126443267|ref|YP_001062066.1| hypothetical protein BURPS668_A1067 [Burkholderia pseudomallei 668] gi|126222758|gb|ABN86263.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 356 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 161/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASTWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|322832729|ref|YP_004212756.1| hypothetical protein Rahaq_2014 [Rahnella sp. Y9602] gi|321167930|gb|ADW73629.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 369 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 151/356 (42%), Gaps = 8/356 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L+ +++ VL A+I+ P+ + + + ++++ + Sbjct: 8 KGFFIAILFIVTLAFFDVLRPYYSSVLWAIILAVIFNPLKNRLKQVVGDRNGVVSLLTVL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDIPGGMWASELWTKH 126 + + PL + LE + +K+ NQ +PV ++ +P WA + H Sbjct: 68 IICLIVFTPLAIITSSLALEFNAVYTKLQ-GNQTQLPVILADFIHHLP--RWARHFLSDH 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G ++ G + + M+ LFF +DG + Sbjct: 125 DLDSTAEIQKKLSDVALQGSQYLAGSVFVIGKSTFGFVVGFGIMLYILFFLIKDGAYLVN 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L + V R+T G ++A+ +G + G A+++AG+ + G Sbjct: 185 -LTLATLPLSRYVKHHLFMKFAAVSRATVKGTVVVAVVQGALGGIAFYIAGLDGSLLWGA 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A +++IP G+ I + +IY G ++ + + + + IVD LRP LVG Sbjct: 244 LMAFLSIIPAVGSAIIWVPAAIYFFASGMLWQGIFIVAFFVVVIGIVDNVLRPLLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 K+P +GG+ G+ G IGP++ AL W S + N ++I+ +F Sbjct: 304 KMPDYLILVTTLGGMEVYGINGFVIGPLIAALFIACWNILSGRDHQNNTDEINEDF 359 >gi|206562699|ref|YP_002233462.1| hypothetical protein BCAM0842 [Burkholderia cenocepacia J2315] gi|198038739|emb|CAR54700.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 350 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 141/346 (40%), Gaps = 5/346 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 6 DHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 66 MSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLLQKYG 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P K L++ F A G + +S M+ +FF RDG I Sbjct: 126 LTNIPGIQKKLTDG--AAQISQFAAAQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G + G +W+ G+ V G Sbjct: 184 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L+ G ++ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+P +GG+ G+ G IGP++ AL W + + Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQ 348 >gi|217969998|ref|YP_002355232.1| hypothetical protein Tmz1t_1578 [Thauera sp. MZ1T] gi|217507325|gb|ACK54336.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 373 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 93/330 (28%), Positives = 163/330 (49%), Gaps = 7/330 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S L F PV A+II + +W Y S+ T A++ T+ + F++P L++ Sbjct: 26 SYAVLHLFIVPVAWAVIIAYATWTPYRQLRSRLPRYPTISALLMTLLLSAAFVLPALWIG 85 Query: 83 YYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETF 140 E+ ++ V + G +P ++ +P G + + P++L+ + Sbjct: 86 MLLRTEVGVAIAAVTAQIREGAFVLPEFVRTLPWIGDDLQAMVGELTREPEALRAQLTEW 145 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ G D G + F +I +FF YRDG + +Q+ ++ Sbjct: 146 VR-QGSDLALTLIGDVGRN----AAKLGFALITVFFLYRDGERVLEQVVAVLRRFLGERL 200 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V + ++ G+ AIG+G V G YW AGVP+ V +G ITA++AMIP G P Sbjct: 201 DPYLSAVGGMTKAVVWGLIATAIGQGFVAGLGYWWAGVPAPVLMGAITAVIAMIPFGTPF 260 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ ++ +LL+ GN L LWGA+ + VD +RP ++ ++PFL FG++GG+ Sbjct: 261 AWGSIGAWLLLTGNTVEGIGLLLWGALVVSWVDNLVRPLVISNATRIPFLLVMFGVLGGL 320 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GL+GLF+GPV++A++ +W E + + Sbjct: 321 SAFGLVGLFLGPVVLAVLMAVWGEWLEESE 350 >gi|167897573|ref|ZP_02484975.1| hypothetical protein Bpse7_27792 [Burkholderia pseudomallei 7894] gi|167922146|ref|ZP_02509237.1| hypothetical protein BpseBC_26558 [Burkholderia pseudomallei BCC215] Length = 356 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASTWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|325528611|gb|EGD05706.1| hypothetical protein B1M_05106 [Burkholderia sp. TJI49] Length = 350 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 137/346 (39%), Gaps = 5/346 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + L F V I+ P+ ++ + A++ Sbjct: 6 DHQKFFYFLLFAVTVGLCGILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P L K Sbjct: 66 MTLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFQDIIHALPTS--IQHLLQK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T F A G + +S M+ +FF RDG I Sbjct: 124 YGLTNIPGIQKKLTDGAAQISQFAASQALSIGQNTFQFIVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G + G +W+ G+ V G Sbjct: 184 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIQGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L+ G ++ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWVPAALYFLMTGAVWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+P +GG+ G+ G IGP++ AL W A + Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQ 348 >gi|288934305|ref|YP_003438364.1| hypothetical protein Kvar_1426 [Klebsiella variicola At-22] gi|288889034|gb|ADC57352.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] Length = 369 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 140/337 (41%), Gaps = 5/337 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ V Sbjct: 8 KGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALLTIV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + PL + E+ + SK+ + Q V + +PG WA +H Sbjct: 68 IICLIVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLFAHLPG--WARGFLAEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + ++ A G + +S M+ LFF +DG + Sbjct: 126 LDSAQQIQQQLSDVALKSGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLV-L 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 185 LTLESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +IYL G ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|167819115|ref|ZP_02450795.1| hypothetical protein Bpse9_28538 [Burkholderia pseudomallei 91] gi|167827496|ref|ZP_02458967.1| hypothetical protein Bpseu9_27695 [Burkholderia pseudomallei 9] gi|226195214|ref|ZP_03790805.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|254189761|ref|ZP_04896270.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254300035|ref|ZP_04967481.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157809903|gb|EDO87073.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157937438|gb|EDO93108.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|225933019|gb|EEH29015.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 161/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|83716829|ref|YP_439890.1| hypothetical protein BTH_II1696 [Burkholderia thailandensis E264] gi|83650654|gb|ABC34718.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 391 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 163/325 (50%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T ++ L +VP+ Sbjct: 70 WVIRDFIPAIAWAGVVAIALWPALRRIDALPAFHGRATLVAAALTAAIALLVVVPVAAGL 129 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +EL+ + Q GIP+P LS +P G AS W HL+ P + + + Sbjct: 130 VEAIEQSRELLGWLHRVEQTGIPMPDALSHLPFGSQQASAWWQAHLAQP----LHPASAV 185 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + + FM++ LF +R G +S L + F Sbjct: 186 KGVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGALLTGVRRAFGDSGA 245 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ Sbjct: 246 ALLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLV 305 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG Sbjct: 306 FCGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAE 365 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 366 TFGLLGLFVGPALMTVLTVLWAEWV 390 >gi|262373577|ref|ZP_06066855.1| permease [Acinetobacter junii SH205] gi|262311330|gb|EEY92416.1| permease [Acinetobacter junii SH205] Length = 372 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 91/332 (27%), Positives = 163/332 (49%), Gaps = 9/332 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIATVSVMCLFIVPLLFLFY 83 LK F PVL A II + +WP+Y + T A I V+ + +P +F + Sbjct: 34 ILKYFIVPVLWAAIIAYMTWPVYLWVQRRFFGENRPTLNATIMITLVILVIGIPFIFAIF 93 Query: 84 YGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 LE + L + G I VP ++ ++P G S + + P S+ ++ Sbjct: 94 MLQLEGRNLYFNLQKQLFSGHIQVPDFIRNLPIIGKDISRTVNELSADPNSITKNVAEWI 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + + F I+ LFFFYRDG I Q+ E + Sbjct: 154 QGH-----LSYGRFVLSEISRNLVKLTFAIMTLFFFYRDGQLILSQVSRALEMVIGPRVH 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + R+ G+ + A+ + ++ G +Y++A VP+ + L ++T I+A+IP G PIS Sbjct: 209 HYLETISETTRAVVYGVGLTAVAQAILAGLSYFVADVPNPMLLTMVTFILALIPFGTPIS 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +V ++L +G A + +WG + + D +RP ++ G K+PF+ FG++GG+ Sbjct: 269 YLSVGLWLFAQGQTVEAIGVVVWGLLVVSSSDNVIRPLVISGATKIPFILIMFGVLGGIA 328 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GL+GLFIGPV++A++ IW+E + + Sbjct: 329 SFGLVGLFIGPVILAILLAIWREWLHENVQEP 360 >gi|86747614|ref|YP_484110.1| hypothetical protein RPB_0488 [Rhodopseudomonas palustris HaA2] gi|86570642|gb|ABD05199.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 371 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 152/345 (44%), Gaps = 3/345 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ + ++ L F+ +L ++I P+Y AV+ Sbjct: 5 DNKFFIFLLAAASVAFVWILLPFYGALLWGVVIAILFAPLYRQLNRAFGFRRNLAAVVGV 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ L ++P + E L +++ N + R + P W ++L + Sbjct: 65 TVIVLLVLLPFSAIGTALAKEATGLYARIESGNLALLNNLRNFIEQPPS-WINDLLERFG 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G +D+ +++ M+ LFF RDG I+ + Sbjct: 124 IGSVAELQQRLSSVLMRGSQYLAGQALTIGQSTVDFTVNLFVMLYLLFFLLRDGDLIAGR 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L G L + VIR+T G +IA+ +G + G A+++ G+ + V+ Sbjct: 184 LRR-GLPLSVDQQNLLLNKFTVVIRATVKGNMLIALIQGALGGLAFYVLGIGGALLWAVV 242 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P GA + + V++YL+ G+++ L +GA+ + +VD LRP LVG + Sbjct: 243 MAFVSLLPAVGAGLVWAPVAVYLIATGSMWQGILLIAYGALVIGMVDNVLRPVLVGKDTR 302 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P +GG++ GL G IGPV+ A+ +W + ++ Sbjct: 303 MPDYVVLISTLGGLQVFGLNGFVIGPVIAAMFIAVWDIYSASRED 347 >gi|306840623|ref|ZP_07473375.1| transmembrane protein [Brucella sp. BO2] gi|306289361|gb|EFM60597.1| transmembrane protein [Brucella sp. BO2] Length = 351 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 150/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 118 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 178 DVGKKIRR-AIPLSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L L G + + +VD LRP LV Sbjct: 237 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVLVGVLVIGLVDNLLRPPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|167722951|ref|ZP_02406187.1| hypothetical protein BpseD_28289 [Burkholderia pseudomallei DM98] Length = 356 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYTFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|152971165|ref|YP_001336274.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895753|ref|YP_002920489.1| putative transport protein [Klebsiella pneumoniae NTUH-K2044] gi|150956014|gb|ABR78044.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548071|dbj|BAH64422.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 369 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 5/337 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ V Sbjct: 8 KGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTIV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + PL + E+ + SK+ + Q V + +PG WA H Sbjct: 68 IICLIVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPG--WARSFLADHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + G ++ A G + +S M+ LFF +DG + Sbjct: 126 LDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 ILE-SLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +IYL G ++ + + I + +VD LRP LVG + Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|53721751|ref|YP_110736.1| hypothetical protein BPSS0723 [Burkholderia pseudomallei K96243] gi|76817947|ref|YP_337450.1| hypothetical protein BURPS1710b_A2299 [Burkholderia pseudomallei 1710b] gi|126455713|ref|YP_001075020.1| hypothetical protein BURPS1106A_A0984 [Burkholderia pseudomallei 1106a] gi|167741935|ref|ZP_02414709.1| hypothetical protein Bpse14_27958 [Burkholderia pseudomallei 14] gi|167848970|ref|ZP_02474478.1| hypothetical protein BpseB_27141 [Burkholderia pseudomallei B7210] gi|167914234|ref|ZP_02501325.1| hypothetical protein Bpse112_27347 [Burkholderia pseudomallei 112] gi|217418668|ref|ZP_03450175.1| putative membrane protein [Burkholderia pseudomallei 576] gi|237509212|ref|ZP_04521927.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242312985|ref|ZP_04812002.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254183096|ref|ZP_04889688.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254192859|ref|ZP_04899294.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254262513|ref|ZP_04953378.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|52212165|emb|CAH38183.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76582420|gb|ABA51894.1| putative membrane protein [Burkholderia pseudomallei 1710b] gi|126229481|gb|ABN92894.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|169649613|gb|EDS82306.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184213629|gb|EDU10672.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217397972|gb|EEC37987.1| putative membrane protein [Burkholderia pseudomallei 576] gi|235001417|gb|EEP50841.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242136224|gb|EES22627.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254213515|gb|EET02900.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 356 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|237731362|ref|ZP_04561843.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906901|gb|EEH92819.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 369 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 145/348 (41%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ + L +F+ +L A I+ P+ + S E + ++I V Sbjct: 8 KGFFIFILALVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNGLASLITIV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH 126 + + +PL+ + +E+ + +K+ Q+ P ++ I + WA +H Sbjct: 68 IICLIVFIPLMVILSSLAIELNVVYTKL---QQNDTQFPEVVTSILSFLPDWARGFLAEH 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G ++ A G + +S M+ LFF +DG + + Sbjct: 125 NLDDIAQIQKKLSDVVLQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVR 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ L + + V R+T G ++A+ +G++ G A+ + + V G Sbjct: 185 QILD-SLPLSDFAKQHLFAKFVGVTRATVKGTAVVALVQGILGGIAFAIVDIDGSVLWGA 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P G+ I + +I+L ++ + + I + +VD LRP LVG Sbjct: 244 LMAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGLVDNILRPLLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 K+P +GG+ G+ G IGP++ AL W E Sbjct: 304 KMPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWNLFSGRDHEGN 351 >gi|146307480|ref|YP_001187945.1| hypothetical protein Pmen_2457 [Pseudomonas mendocina ymp] gi|145575681|gb|ABP85213.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 362 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 7/334 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F++ + A ++ F SWP+ + + A I T + L PL++L + Sbjct: 22 WVLAPFWSALFWAAVLAFASWPLMRLLTQLLKGRLSLAAGILTCGWVILVAGPLIWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +K+ + + G+P P WL+ +P G + LW + +L Sbjct: 82 LADHIKDANALIKDLQVEGLPPPPAWLTGLPLVGERLAALWMTIDQQGAAFFASLRPYLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A G + ++ FFFYRDG ++ + L E L Sbjct: 142 QVGNWLLARSAQLGGGMLELGLSLVLV-----FFFYRDGPRLAVFVHGLLERLIGERADH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A +GL+ +W+AGVP + LG++T +++++P G P+ + Sbjct: 197 YLELVAGTVQRVVNGVIGTAAAQGLLALIGFWIAGVPGAIVLGILTFVLSLVPMGPPLVW 256 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +L+ +G+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 257 IPATAWLVWQGDYGFALFLGVWGMFVISGVDNILKPYLISRGGNLPLVVVLLGVFGGLLA 316 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G +GLF+GP L+A+ + + + E++ Sbjct: 317 FGFMGLFLGPTLLAVAYSLLSDWVADKAPPAEEV 350 >gi|134278850|ref|ZP_01765563.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167905924|ref|ZP_02493129.1| hypothetical protein BpseN_27051 [Burkholderia pseudomallei NCTC 13177] gi|134249269|gb|EBA49350.1| putative membrane protein [Burkholderia pseudomallei 305] Length = 356 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY LAG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYALAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|77459939|ref|YP_349446.1| hypothetical protein Pfl01_3717 [Pseudomonas fluorescens Pf0-1] gi|77383942|gb|ABA75455.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 353 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 7/338 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + + ++ L F+ V A+I+G P+ K ++ + + Sbjct: 13 VLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNLTSLCTLSICLVI 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+P++ L + E L + + + +L+ + L Sbjct: 73 AILPVIVLSVLLVQEGATLYDNIESG---KLDIGAYLAQFKHSLPPYFQHLLDRFGMGEL 129 Query: 134 KILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L E +K G + A FG ++ +S M+ LFFF RDG +++++ + Sbjct: 130 NALREKIVKAAMQGSQVLASQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGAELARKVRTA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + +++ +V+R+T G ++AI +G + G+ +W +PS + V+ A + Sbjct: 190 IP-LEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALLWAVLMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P GA I + V++Y L+ G I+ L L+G + +VD LRP LVG ++P Sbjct: 249 SLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTRMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +GG+ GL G IGP++ AL W I + Sbjct: 309 MILISTLGGLAVFGLNGFVIGPLIAALFMSSWALFIES 346 >gi|316932016|ref|YP_004106998.1| hypothetical protein Rpdx1_0627 [Rhodopseudomonas palustris DX-1] gi|315599730|gb|ADU42265.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris DX-1] Length = 381 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 76/353 (21%), Positives = 154/353 (43%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 P ++ I+ ++ V+ + L ++ VL ++I P+ A+ Sbjct: 2 PASENKFFILLLVTVTGLFGWILWPLYSAVLWGMVIAILFAPLNRWLNQAFGFRRNLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + ++PL L E + +K+ N + R L L Sbjct: 62 TSVTIIVLMVLLPLSLLGAALAREAAGMYTKIESGNLDLLNTLRELLAARPDWIGDLLGR 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + L+ L G ++ A G D+ +++ M+ LFF RDG + Sbjct: 122 FGVGNLADLQQRLSAVL-LRGSQYLAGQALGIGQSTFDFTVNLFVMVYLLFFLLRDGDLV 180 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L + ++ VIR+T G +IA+ +G + G A+++ G+ + Sbjct: 181 AGRIRR-ATPLGVDHQTRLLDKFTVVIRATVKGNMLIALIQGSLGGLAFYVLGISGALMW 239 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ A ++++P GA + + +++YL+ G+I++ L +WGA+ + +VD LRP LVG Sbjct: 240 AVVMAFLSLLPAVGAGLVWLPMALYLIFTGSIWHGIGLIVWGALVIGMVDNVLRPILVGK 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P +GG+ GL G +GPV+ A+ W + +E + Sbjct: 300 DTRMPDYVVLISTLGGLEVFGLNGFVVGPVIAAMFIAAWDIYSTSREEAGDTP 352 >gi|148558731|ref|YP_001257437.1| hypothetical protein BOV_A0400 [Brucella ovis ATCC 25840] gi|225628899|ref|ZP_03786933.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|148370016|gb|ABQ62888.1| putative membrane protein [Brucella ovis ATCC 25840] gi|225616745|gb|EEH13793.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 372 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 151/355 (42%), Gaps = 7/355 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R M + ++ + + + L ++ VL A+I+ +P+ + Sbjct: 18 RVLMSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNI 77 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--A 119 A ++ + +CL I+P+L +F + E L ++ + +++ I + Sbjct: 78 AAFLSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESL 134 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + + + G FG L + + M+ LFF +R Sbjct: 135 EEWLKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFR 194 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ Sbjct: 195 DGADVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIE 253 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP Sbjct: 254 AALLWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRP 313 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 314 PLVGKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 368 >gi|71064848|ref|YP_263575.1| hypothetical protein Psyc_0271 [Psychrobacter arcticus 273-4] gi|71037833|gb|AAZ18141.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 379 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 90/347 (25%), Positives = 171/347 (49%), Gaps = 7/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +++ + ++ ++ F P L I+ + ++PIY+ F + SS F A I T Sbjct: 12 QRLLAITLLVVLFVLCFQVVRFFIVPALWGAILAYVTFPIYNFFHQRVRFSSNFSATIMT 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTK 125 VS+ + VPL+ + E L+S +V + G + VP + D+P G ++ + Sbjct: 72 VSITLMIGVPLVAGIFILQQEALSLISNLVYRIKAGYLDVPDSVKDLPVIGQQVKDVLWR 131 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +P +++++ + + + ++ LFFFYRDG S+ Sbjct: 132 VNKNPAGTLETFRLWVQSHLY-----YGKIAFDVVFSSLAKLGMALMTLFFFYRDGTSLV 186 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +Q+ ++ V R+ G+ + A+ + L+ G Y+ A PS + + Sbjct: 187 RQIRQALRNIIGNRIDGYIDSVGTTTRAVVYGIGLTALAQALLAGIGYYFASAPSPILMT 246 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T I+A+IP G P + ++S++LL +G+ L LWG + + VD +RP ++ G Sbjct: 247 ILTFIIALIPFGTPFVWGSISLFLLSQGHTVEGIGLALWGILVISWVDNLIRPIVISGAT 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I K Sbjct: 307 KIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIGLAVWREWISQHKNE 353 >gi|260596705|ref|YP_003209276.1| hypothetical protein CTU_09130 [Cronobacter turicensis z3032] gi|260215882|emb|CBA28407.1| hypothetical protein CTU_09130 [Cronobacter turicensis z3032] Length = 367 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 146/354 (41%), Gaps = 8/354 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M + + + I+ + +VS+ F +K + + VL A+I+ +P+ + Sbjct: 1 MNSKEMSRAFFILILFIVSILFFNLVKPYLSAVLWAVILAVIFYPVKRRLCHMMNGRNNI 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWAS 120 +++ V + L VPL + + E L + + + + + +P WA Sbjct: 61 ASLLTVVLICVLVFVPLAVVASSLVREFNTLYTDLQANDTTFPTLLADGVRILP--DWAQ 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ ++ + + + G ++ + M+ LFF +D Sbjct: 119 QMLAENHLDSAAAIQKKISGVALKGSQYVAGSIFLISRNTFSVVIGFGIMLYLLFFLLKD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + L +++ R V R+T G ++AI +GL+ G A++ AG+ + Sbjct: 179 GSRLVAVVLNAVP-LSDKVKQRLFRRFAAVSRATVKGTVVVAIVQGLLGGVAFYFAGIGA 237 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + A ++++P GA + + IYL G I A L + + + + D LRP Sbjct: 238 SILWGSLMAFLSLVPAVGAALIWVPAVIYLFTTGAIIKAVLLTAFFVVVVGLADNLLRPL 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG I++P +GG+ G+ G +GP++ AL W Sbjct: 298 LVGKDIRMPDWLILLATLGGLEVYGINGFVVGPLIAALFVTCWNTFSAGPGRTH 351 >gi|170751399|ref|YP_001757659.1| hypothetical protein Mrad2831_5018 [Methylobacterium radiotolerans JCM 2831] gi|170657921|gb|ACB26976.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 372 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 7/327 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F + A+++ WPIY + + + L + T +V +F+ PL L Sbjct: 45 WILHEFLPALAWAVVLAIALWPIYQRLEHRFPPGKHNILLPTLMTAAVALVFLAPLAILG 104 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKILSETFL 141 E ++ V A +GIP P +L +P G A+ W +L H Q+ L Sbjct: 105 IQAAREAHDVAEFVRNAEANGIPAPEFLQHLPYGAAQATAWWNDNLGHAQA----GSDLL 160 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + G + + F ++ALFF +RD ++ Q + LF + Sbjct: 161 RRFENHSVLGASRNVGREVVHRIVLFGFSLVALFFLFRDWRTVRDQSLTACHRLFGPRGE 220 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++R + + T G+ ++ +GEG VLG Y AGVP V LG TA+ AMIP GA ++ Sbjct: 221 RVARQMVASVHGTVDGLVLVGLGEGFVLGIVYHFAGVPHPVLLGAFTAVAAMIPFGAAVA 280 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L+ G++ A + G + F+ D +RP L+GG KLPFL G++GGV Sbjct: 281 IAVAALLLVAAGSVTAALVVAAAGLVVTFVADHFIRPALIGGTTKLPFLWVLLGILGGVE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 T GLLGLF+GP +MA + ++W+E Sbjct: 341 TFGLLGLFVGPAVMAALVLLWREFTEG 367 >gi|91974818|ref|YP_567477.1| hypothetical protein RPD_0338 [Rhodopseudomonas palustris BisB5] gi|91681274|gb|ABE37576.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 365 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 151/345 (43%), Gaps = 6/345 (1%) Query: 10 GIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 R+ I+ +++ S+ + L ++ VL ++I P+Y A+ Sbjct: 4 SENRFFILLLLVASIGFGWILLPLYSAVLWGVVIAILFAPLYRQLNRAFGFRRNLAALTT 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + I+P+ + E + + ++ N + + + P + L Sbjct: 64 VAIIVTMVILPISLIGAALAQEARAMFLRIESGNLDMLQYLKQVLAEPPAWISGVLERFS 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L+ L G ++ A G ++ +++ M+ LFF RDG ++ Sbjct: 124 IGNLSDLQERLSAVL-MRGSQYLAGQAIGIGQGTVEIVINLGVMVYLLFFLLRDGDLLAA 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L ++ R VIR+T G +IA+ +G + G +++ GV + GV Sbjct: 183 RIRRAVP-LSVEQESQLLRKFTVVIRATVKGNMLIALIQGALGGVMFYILGVNGALLWGV 241 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA + + V++YLL G+I+ L +G + + VD LRP LVG Sbjct: 242 VMAFLSLLPAVGAGLVWLPVALYLLGTGSIWQGVALIAFGTMVIGTVDNVLRPVLVGKDT 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++P +GG++ GL G IGPV+ A+ W + + Sbjct: 302 RMPDYVVLISTLGGIQVFGLNGFVIGPVIAAIFIAAWDIYSASRE 346 >gi|90423586|ref|YP_531956.1| hypothetical protein RPC_2083 [Rhodopseudomonas palustris BisB18] gi|90105600|gb|ABD87637.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 356 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 3/345 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ I L + L F+ +L ++I P+ + + T A+I + ++ Sbjct: 10 FLLLVVVISLAFGWILWPFYGAILWGVVIAVVFAPLSRRLAALMPQRPTLAALITLLIIV 69 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+PL + E + K+ + + + + ++ WA+ L ++ Sbjct: 70 FIVILPLTLVVASLAQEAASVYEKIQSKDLDLVRSFQEVLNVLPS-WATSLLERYGLASL 128 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + G FI A G D+ L + MI LFF RD ++S+++ + Sbjct: 129 GAVQDKLSAGLLKGSQFIATQALNVGQSTFDFVLELFIMIYLLFFLLRDEAALSRRIRTA 188 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L P K + V+R+ G ++A+ +G + G +W G+ + + V+ A + Sbjct: 189 IP-LRPEQQKALLNKFTVVVRAMIKGNMLVALLQGALGGLMFWFLGISASLLWAVLMAFL 247 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P GA + + V+IYLL G+I+ L +GA+ + +VD LRP LVG K+P Sbjct: 248 SLLPAVGAGLIWGPVAIYLLAIGSIWKGVLLIAYGALVIGLVDNILRPILVGKDTKMPDY 307 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GG+ G+ G IGPV+ AL +W + +++ + Sbjct: 308 IVLISTLGGIEVFGINGFVIGPVIAALFIAVWDIFSASRQQDAQP 352 >gi|289679219|ref|ZP_06500109.1| hypothetical protein PsyrpsF_38341 [Pseudomonas syringae pv. syringae FF5] Length = 330 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 3/312 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAK-G 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 140 AMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P GA I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGP 332 GL G IGP Sbjct: 319 SVFGLNGFVIGP 330 >gi|152987375|ref|YP_001349002.1| hypothetical protein PSPA7_3648 [Pseudomonas aeruginosa PA7] gi|150962533|gb|ABR84558.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 354 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 148/335 (44%), Gaps = 8/335 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++ Sbjct: 18 AASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLVW 77 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSE 138 L + ++ L+ + G+P P W++ +P G W + + + Sbjct: 78 LGFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLVGDRLIGWWDSIDQQGVAFFYVLK 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 ++ G + R A G L ++ ++ +FFFYRDG + + E L Sbjct: 138 PYVGEVGNWLLARSAKIGGG-----ILELVLSLVLIFFFYRDGPRLESIVHRALERLIGN 192 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +V ++ G+ A + L+ + +AGVP + LG++T + +++ Sbjct: 193 RAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFTIAGVPGAMLLGLLTFVFSLL-MVP 251 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ + + +L +G+ + L LWG + VD L+P+L+ LP + G+ G Sbjct: 252 PLVWGPATAWLFFQGDYGHGIFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFG 311 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G +GLF+GP+L+A+ + + I + Sbjct: 312 GLLAFGFMGLFLGPILLAVAYNLVSDWIASTPRPP 346 >gi|311105126|ref|YP_003977979.1| hypothetical protein AXYL_01931 [Achromobacter xylosoxidans A8] gi|310759815|gb|ADP15264.1| hypothetical protein AXYL_01931 [Achromobacter xylosoxidans A8] Length = 363 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 139/345 (40%), Gaps = 5/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ +++ + + + L F+ V ++ P+ +++ Sbjct: 1 MSQSSSVHYRTFLLLLVVVTIAFGWLLWPFYGAVFWGAVLAIIFAPLQRRLVARIGGRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWA 119 A+I + V+ L I+PL+ + + E L V G + ++ +P Sbjct: 61 LAALITLLLVLLLVILPLIVISGSLVREGANLYQSVKSGQINFGAYFQQAMAALPPS--V 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +L + + F+ A G + +S M+ LFF R Sbjct: 119 HDLLARFDLTDIPSLQEKLSAGAMQASQFLATQALNIGQDTFQFVISFGIMLYLLFFLLR 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +S +L L + + + R V+R+T G +A +G + G + + + Sbjct: 179 DGPLLSARLKR-AMPLSDTHKQHLLRKFTTVVRATVKGNVAVAAAQGALGGIIFSILSIQ 237 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GVI ++++P GA + + V+IY L+ G L L+G + + +VD LRP Sbjct: 238 GALLWGVIMGFLSLLPAIGAGLIWAPVAIYFLLTGATIKGVVLILFGVLVIGMVDNVLRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 ILVGKDTKMPDYVVLISTLGGMALFGLNGFVIGPLIAALFMASWD 342 >gi|297539685|ref|YP_003675454.1| hypothetical protein M301_2517 [Methylotenera sp. 301] gi|297259032|gb|ADI30877.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 352 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 88/346 (25%), Positives = 164/346 (47%), Gaps = 8/346 (2%) Query: 5 MLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+N + R I+ +++ +Y L+ F A L A I +WP+Y + + T+ A Sbjct: 1 MINTNQVTRIAIITLLVIGCIYVLQPFMAAALFAAIFCLFTWPLYHRLWLRLGKRDTWAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASE 121 +I T+ ++ I+P+ +L +L +++ Q P VP W+ ++P G S Sbjct: 61 MIMTLLLLIALILPMAYLAMNLADSSDQLFNELGTRLQSLQPKVPDWVRNLPIVGEQISH 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + + L L + + + FA R + L ++ ++ FFFYRDG Sbjct: 121 SWERATASQEELMKLLRQYYEP-----MRTFALRAVQLVAGGFLQLLLVVFVAFFFYRDG 175 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+Q L ++ L +++ + ++ LG+ A+ + +V + LAG P+ Sbjct: 176 TRIAQGLVTIVRRLGGELGEEMLILSCNTVKGVMLGIFGTALAQSVVAMIGFLLAGAPAP 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L T +++IP G P+ + S +L +G A L L+G + + VD ++P L+ Sbjct: 236 LLLACATFFLSVIPVGPPLIWGGASFWLYSQGEHGWAIFLALYGLLAISTVDNVVKPILI 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LP L FG++GG T G +G+F+GP L+A+ + + Sbjct: 296 SHSSHLPLLLIVFGVLGGALTFGFIGIFLGPTLLAVGFTLMLHWMA 341 >gi|330015775|ref|ZP_08308269.1| hypothetical protein HMPREF9538_05993 [Klebsiella sp. MS 92-3] gi|328530551|gb|EGF57419.1| hypothetical protein HMPREF9538_05993 [Klebsiella sp. MS 92-3] Length = 369 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 137/337 (40%), Gaps = 5/337 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ +L A I+ P + + E + A++ V Sbjct: 8 KGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPDKNKPRPRLGERNGLAALMTIV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHL 127 + + PL + E+ + SK+ + Q V + +PG WA H Sbjct: 68 IICLIVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPG--WARSFLADHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + G ++ A G + +S M+ LFF +DG + Sbjct: 126 LDSAQQIQQQLSDAALKGGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 ILE-SLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSILWGAL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +IYL G ++ + + I + +VD LRP LVG + Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|192360560|ref|YP_001981648.1| hypothetical protein CJA_1152 [Cellvibrio japonicus Ueda107] gi|190686725|gb|ACE84403.1| putative membrane protein [Cellvibrio japonicus Ueda107] Length = 387 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 8/349 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +N + R ++F++ VS+ F L+ FF + A I +P++ + + Sbjct: 1 MNKKLETRTFLLFLLAVSIAFILVLRPFFGTIFWACAITIIFYPLHLRLVELTRGRTNTS 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ V+ + + ++P +FL + E K+ I +++ + A + Sbjct: 61 ALLTLVACILIVVLPAIFLISSVVREGAVFYGKLQSGE---INPAQYIEQLRTAFPAVQQ 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +HL + L + I + G L+I M+ FF RDG Sbjct: 118 ALEHLEIDIDNLKKNALDLGMSSGKLIAQHLLNAGQNTFILLLNICLMLYLTFFLLRDGP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L L A + + +V R+T G +IA+ +G + G +W+ G+P + Sbjct: 178 QLLELLIRALP-LGDARERLLFAKFGEVTRATIKGNLVIAVIQGSLGGLIFWVLGIPGAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ AI+++IP G + + V+IYL G+ L +G + ++D LRP LV Sbjct: 237 LWGVVMAILSLIPAVGPALIWLPVAIYLFATGDFTKGAILVAFGGGVIGLIDNILRPILV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G KLP +GG+ G+ G IGP++ AL W I I Sbjct: 297 GRDTKLPDYIVLLSTLGGLGLFGVNGFIIGPLVAALFMAFWGIFIREIH 345 >gi|162148843|ref|YP_001603304.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545409|ref|YP_002277638.1| hypothetical protein Gdia_3296 [Gluconacetobacter diazotrophicus PAl 5] gi|161787420|emb|CAP57015.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209533086|gb|ACI53023.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 381 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 104/362 (28%), Positives = 182/362 (50%), Gaps = 7/362 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--S 58 MRE + + MF L++LY ++GF ++ I +WP+Y++ + + Sbjct: 21 MRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIFAIVAWPLYAATRERWKSLPG 80 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM- 117 T L ++ T + +F+VP+ E + +V+ A G+PVP W+ +P G Sbjct: 81 GTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANEARHSGMPVPGWIQRLPLGSA 140 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + W HL++P + L +F +G+ R G + IF I+ LFF Sbjct: 141 TLAGWWQDHLANPDDVSDLLHSFNIGHGMQ----VTQRVGTQIFHRGVLFIFAILTLFFL 196 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG S+++Q + F + I++ + I T G+ ++ +GEG ++G AY +AG Sbjct: 197 LKDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLVGLGEGALMGVAYLIAG 256 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 GV TA+ AMIP A I+ AV++ LL+KG A + G +FI D +R Sbjct: 257 AQHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAILALGLAVIFIADHFVR 316 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L+GG ++PFL G++GGV + LLGLF+GP +M+++ ++W+ ++ + Sbjct: 317 PALIGGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLLWRNWTRDRVQDGLREE 376 Query: 358 SN 359 ++ Sbjct: 377 AD 378 >gi|116049570|ref|YP_791626.1| hypothetical protein PA14_43510 [Pseudomonas aeruginosa UCBPP-PA14] gi|296390001|ref|ZP_06879476.1| hypothetical protein PaerPAb_17706 [Pseudomonas aeruginosa PAb1] gi|313106640|ref|ZP_07792863.1| putative permease [Pseudomonas aeruginosa 39016] gi|115584791|gb|ABJ10806.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|310879365|gb|EFQ37959.1| putative permease [Pseudomonas aeruginosa 39016] Length = 355 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 8/334 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + ++ L+ + G+P P W++ +P G W + + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWNSIDQQGVAFFYVLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ G + R A G L ++ +I +FFFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGG-----ILELVLSLILIFFFYRDGPRLESIVHRALERLIGNR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P Sbjct: 194 AEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFTIAGVPGAMLLGLLTFACSLL-MVPP 252 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG Sbjct: 253 LVWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGG 312 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +GLF+GP+L+A+ + + I + Sbjct: 313 LLAFGFMGLFLGPILLAVAYNLLSDWIASTPRTP 346 >gi|327480919|gb|AEA84229.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 353 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 148/335 (44%), Gaps = 3/335 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + +++ + L + L F+ V A+I+ P+ + + A+ + Sbjct: 8 QKVFLALLVVVSLAFGWILLPFYGAVFWAVILAIIFAPLQRYLYRRFSQRRNLTALFTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++P++ + + E L ++ + L ++ ++L Sbjct: 68 VCLLVAVLPVILITGMLVQEGATLYKQIKSGELDIGRLVSGLRELLPQSVQAQLQRFGFG 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ + G F+ A FG + +S M+ LFFF RDG + ++ Sbjct: 128 DLDSMRERLAS-GALEGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVARI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ +V+R+T G ++A+ +G + G + + G+ + GV+ Sbjct: 187 RKAIP-LSDAQKTRLFNKFTRVVRATVKGNIVVAVTQGALGGIIFAVLGISGALLWGVLM 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P GA + +T V+IY L+ G I+ L L+G + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAVGAGLIWTPVAIYFLMTGAIWQGVILTLYGVLVIGLVDNILRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P +GG+ GL G IGP++ AL W Sbjct: 306 PDYVVLISTLGGLALFGLNGFVIGPLVAALFISTW 340 >gi|27383175|ref|NP_774704.1| hypothetical protein blr8064 [Bradyrhizobium japonicum USDA 110] gi|27356349|dbj|BAC53329.1| blr8064 [Bradyrhizobium japonicum USDA 110] Length = 387 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 168/335 (50%), Gaps = 6/335 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-KEESSTFLAVIATVSVMC 72 + I+ +SL+ GF + ++ A I+ WP+Y +F ++ S + A T V Sbjct: 47 VFALAIVALSLWTAAGFLSALIWATILAIALWPLYVAFANRVMSGPSGWSAFAFTCFVAV 106 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 + P+ Y + E+ + + A + GI VP W++ +P A + W +LS PQ Sbjct: 107 ILFTPMALAIYQVAQQSGEIAAWLKKARESGIEVPDWIARLPIAAEIAQQWWRANLSDPQ 166 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + N D + G L ++F ++ALF +G S++ + Sbjct: 167 AATGWLKAISADNASDLF----NSLGGQLLHRMFMLLFSLVALFVLLSNGRSVASRFLET 222 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 E + + + + IR T G ++A+GEGL++G Y +AGVP+ V + T Sbjct: 223 SERILGHPGEGVVEKIVDSIRGTVNGTVVVAVGEGLLIGVGYLVAGVPNAVMFTIFTTAF 282 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 AM+P GA +F+A ++ L+ GN A +F WGA+ + D + P LVGG +LPFL Sbjct: 283 AMLPFGAWAAFSAAALTLISNGNEAAAAGVFCWGAVIMLAGDHFVWPVLVGGSARLPFLF 342 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F G+ GG+ GL+GLF+GPV+MA + +W+E + Sbjct: 343 AFVGIFGGLAAFGLIGLFLGPVVMAALLTVWREWV 377 >gi|212704261|ref|ZP_03312389.1| hypothetical protein DESPIG_02316 [Desulfovibrio piger ATCC 29098] gi|212672341|gb|EEB32824.1| hypothetical protein DESPIG_02316 [Desulfovibrio piger ATCC 29098] Length = 368 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 6/344 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + L L+ L+ FF + ++I S P+Y + ++ A+ + Sbjct: 11 RAFLLLLAGVSLAFLWMLRPFFDVIFWGIVIALLSTPVYDALQRRRMGR-NLAALTCVIL 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L IVP ++FY + E+ L +++ G + L + + W + Sbjct: 70 SLVLIIVPCAYIFYTFINEVANLYARLTSG---GHDIRETLERLREVAPGVQDWLTRYGY 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L + R G +++ + + M+ FF RDG + + L Sbjct: 127 GPEVITQKLSELAVKISGLVARNTVALGGSTVNFLVDLCIMLYLAFFLVRDGKQL-RVLL 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +V+R+T G ++A+ +G + G +W+ G+ + V GV+ Sbjct: 186 IRALPFGDHREDLLFAKFAEVLRATVKGSLLVAMAQGALGGLIFWILGIKAPVLWGVVMT 245 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++IP GA + + V+ YLL+ G+ + L +G + + D LRP LVG KLP Sbjct: 246 LLSLIPVVGAGVVWAPVAGYLLLTGDHVSGVVLLAYGVFVIGLADNILRPVLVGRDTKLP 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GG G+ G GP+L L +WK + K Sbjct: 306 DFMVLLSTLGGFSLFGMDGFVTGPMLAVLFVTVWKIFMDEFKPP 349 >gi|115522818|ref|YP_779729.1| hypothetical protein RPE_0793 [Rhodopseudomonas palustris BisA53] gi|115516765|gb|ABJ04749.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisA53] Length = 355 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 19/348 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I + L + L F++ +L L+I P++ + + + AV Sbjct: 7 KFFLLLIAAVTLAFGWVLMPFYSGLLWGLVIAILFMPLHRRLSAAMRDRDSLAAVSTVAI 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVL--------ANQHGIPVPRWLSDIPGGMWASE 121 V+ ++PL + E S++ Q +P W++D + ++ Sbjct: 67 VIMSVLLPLSLIGAALAREAAITYSRLQSREFDLARLWQQVTGALPSWINDWINRVELAD 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L L G F+ A G ++ +++ M+ LFF +RDG Sbjct: 127 LGELQNKLSDGLLK---------GSQFLAGQALTIGQNTFEFAINLGVMLYLLFFLFRDG 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++SQ++ + + ++ VIR+T G +IA+ +G + G W G+ Sbjct: 178 EALSQRIRDALP-MREHLFDELLTKFIVVIRATIKGNMVIAMLQGALGGLMLWFLGIGGA 236 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + V+ A ++++P GA + + V+IYLL G ++ L +G + +VD LRP L Sbjct: 237 LLWAVVMAFLSLLPAIGAGLVWLPVAIYLLATGAVWKGVLLIAYGTFVIGMVDNLLRPIL 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 VG K+P +GG+ GL G +GPV+ A+ +W + Sbjct: 297 VGKDTKMPDYVVLISTLGGLEVFGLNGFILGPVIAAMFIAVWDIFASS 344 >gi|209965732|ref|YP_002298647.1| hypothetical protein RC1_2451 [Rhodospirillum centenum SW] gi|209959198|gb|ACI99834.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 362 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 155/351 (44%), Gaps = 11/351 (3%) Query: 5 MLNPQGIMRWM----IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + R + ++ + + +K F + +L A+I+ + +WP Y Sbjct: 1 MATDKLVERALGMAALVVLGTAIILVVKPFLSALLLAVILVYATWPAYLWVERTCGGRKN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMW 118 A + T + + P + + + S + ++G P P WL D+P G W Sbjct: 61 LAAFLMTALSSLVIVAPFAIVGATLADSVGGISSGIRQIIENGPPPPPVWLGDVPLVGPW 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 A W + Q L L +GI A G + L ++ + FF Y Sbjct: 121 AVGYWADLTAGGQDLLT-----LLRSGIRPATDLALAAGSVIGAGVLELMAAVFIAFFLY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 R G I++Q+ E + + ++ G+ A+ +G++ G + +AG+ Sbjct: 176 RGGRDIARQVAYAIERFTGPRVHHLLEVAGGTVQGVIYGILGTALAQGILAGLGFVVAGI 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG +T ++++IP G P+ + VS++L +G I A + WG + VD LRP Sbjct: 236 PWGPFLGFMTFVVSVIPMGPPLIWVPVSVWLATEGEIGWAVAMAAWGFFVVSSVDNVLRP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +L+ LP + F G++GGV G++G+FIGPVL+AL + +E Sbjct: 296 YLISRGSALPLVLVFMGVLGGVLAFGVIGIFIGPVLLALGYALMREWTAQA 346 >gi|15596822|ref|NP_250316.1| hypothetical protein PA1625 [Pseudomonas aeruginosa PAO1] gi|9947592|gb|AAG05014.1|AE004590_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 355 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 8/334 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + ++ L+ + G+P P W++ +P G W + + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ G + R A G L ++ +I +FFFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGG-----ILELVLSLILIFFFYRDGPRLESIVHRALERLIGNR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P Sbjct: 194 AEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLL-MVPP 252 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG Sbjct: 253 LVWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGG 312 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +GLF+GP+L+A+ + + I + Sbjct: 313 LLAFGFMGLFLGPILLAVAYNLLSDWIASTPRTP 346 >gi|237817216|ref|ZP_04596208.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|237788029|gb|EEP62245.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 372 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 5/354 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R M + ++ + + + L ++ VL A+I+ +P+ + Sbjct: 18 RVLMSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNI 77 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWAS 120 A ++ + +CL I+P+L +F + E L ++ + R ++ +P Sbjct: 78 AAFLSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALPES--LE 135 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + + G FG L + + M+ LFF +RD Sbjct: 136 EWLKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRD 195 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + Sbjct: 196 GADVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEA 254 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP Sbjct: 255 ALLWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPP 314 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 315 LVGKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 368 >gi|317491965|ref|ZP_07950399.1| hypothetical protein HMPREF0864_01163 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920086|gb|EFV41411.1| hypothetical protein HMPREF0864_01163 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 366 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A +I +WP+ + ++ T+ ++ L Sbjct: 18 LFVSLMIVACLWVVRPFILGFAWASMIVIATWPVLIKLQNIFWGKRWIAVLLMTMLLLLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FI+P+ + + ++ A +P WL IP G W L+ S Sbjct: 78 FIIPIALVIGSLIDNSGPVLDWASSAKNWSVPDLLWLKSIPAVGHKLYNSWHSMLAGGGS 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + I I + A+ G L L ++F + Y G ++ + Sbjct: 138 IIIAKIQPYIGQTITWFVAQAAHVGSFVLHCSLMLLFSAL----LYSRGEDVALGIRHFA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++G+ L V+ I Sbjct: 194 IRLGSDRGDAAVVLAAQAIRAVALGVVVTALVQSVLGGIGLAISGIGYATLLTVLMFICC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W + +D LRP L+ LP + Sbjct: 254 LAQLGPLLVLVPAIIWLYWTGDTTWGTVLLVWSC-VVGTLDNFLRPALIRMGADLPMILI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ + + E + + Sbjct: 313 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSAWVHEAPEPSKDVEQ 358 >gi|291617264|ref|YP_003520006.1| YdiK [Pantoea ananatis LMG 20103] gi|291152294|gb|ADD76878.1| YdiK [Pantoea ananatis LMG 20103] Length = 376 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 66/353 (18%), Positives = 143/353 (40%), Gaps = 8/353 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ L I+ +I L+ ++ F A ++ +WP+ + Sbjct: 16 RQIDLPQMLFTLIFILLLIAACLWVVQPFILGFAWASMVVIATWPLMLKIQRLLWGRRSL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LFI+P+ L + +++ H +P WL+DIP G Sbjct: 76 AVIVMTILLLLLFIIPVALLVNSLIDNSAPVIAWATQG--HMLPTLNWLNDIPMVGEKLY 133 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + K ++ + + F+ R + + + ++F ++ Y Sbjct: 134 ASYQKLVAGGGAAIMAKLQPYVGRTTGFLWRRPGTLAVFMIHLAVMLLFSVL----LYWR 189 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +Q + + + + +R+ LG+ + A+ +G++ G ++G+P Sbjct: 190 GEQAAQGIRHFAWRMAGRRGDAAVLLAGQAVRAVALGVVVTALVQGVLGGIGLAVSGIPY 249 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G + +YL G+ T L +W + +D LRP L Sbjct: 250 ATLLTVLMILCCLVQIGPLLVLVPAIVYLYWSGDTTWGTVLLIWSC-VVGTLDNILRPVL 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 309 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWMHEVPAPQ 361 >gi|167839250|ref|ZP_02465977.1| hypothetical protein Bpse38_21639 [Burkholderia thailandensis MSMB43] Length = 356 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T +V L +VP+ Sbjct: 35 WVIRDFVPAIAWACVVAIALWPALRRIDALPAFHGRATLVAAALTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + A Q GIP P LS +P G AS W +L+ P + + + Sbjct: 95 VEAVEQSHELLGWLHRAEQTGIPAPDALSHLPFGSQQASAWWQANLAKP----LHPASAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K+ + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KSVDGGSVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGALLTGVRRAFGESGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + R + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ Sbjct: 211 ALLRRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|107101057|ref|ZP_01364975.1| hypothetical protein PaerPA_01002087 [Pseudomonas aeruginosa PACS2] gi|218892418|ref|YP_002441285.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254239971|ref|ZP_04933293.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126193349|gb|EAZ57412.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218772644|emb|CAW28429.1| putative permease [Pseudomonas aeruginosa LESB58] Length = 355 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 8/334 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + ++ L+ + G+P P W++ +P G W + + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ G + R A G L ++ +I +FFFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGG-----ILELVLSLILIFFFYRDGPRLESIVHRALERLIGNR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P Sbjct: 194 AEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLL-MVPP 252 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG Sbjct: 253 LVWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGG 312 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +GLF+GP+L+A+ + + I + Sbjct: 313 LLAFGFMGLFLGPILLAVAYNLLSDWIASTPRTP 346 >gi|53716952|ref|YP_106010.1| hypothetical protein BMAA1401 [Burkholderia mallei ATCC 23344] gi|67643334|ref|ZP_00442081.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121597068|ref|YP_990127.1| hypothetical protein BMASAVP1_0518 [Burkholderia mallei SAVP1] gi|124383193|ref|YP_001023956.1| hypothetical protein BMA10229_0130 [Burkholderia mallei NCTC 10229] gi|126446549|ref|YP_001078668.1| hypothetical protein BMA10247_A1484 [Burkholderia mallei NCTC 10247] gi|167001472|ref|ZP_02267269.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254174598|ref|ZP_04881260.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254200862|ref|ZP_04907227.1| putative membrane protein [Burkholderia mallei FMH] gi|254204829|ref|ZP_04911182.1| putative membrane protein [Burkholderia mallei JHU] gi|254356602|ref|ZP_04972877.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52422922|gb|AAU46492.1| putative membrane protein [Burkholderia mallei ATCC 23344] gi|121224866|gb|ABM48397.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124291213|gb|ABN00483.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126239403|gb|ABO02515.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|147748474|gb|EDK55549.1| putative membrane protein [Burkholderia mallei FMH] gi|147754415|gb|EDK61479.1| putative membrane protein [Burkholderia mallei JHU] gi|148025629|gb|EDK83752.1| putative membrane protein [Burkholderia mallei 2002721280] gi|160695644|gb|EDP85614.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|238524656|gb|EEP88088.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|243062780|gb|EES44966.1| putative membrane protein [Burkholderia mallei PRL-20] Length = 356 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAAVLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + Q GIP P LS +P G AS W +L+ P + T + Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWLANLAKP----LHPATAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG Sbjct: 271 FGGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|329296193|ref|ZP_08253529.1| putative inner membrane protein [Plautia stali symbiont] Length = 370 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 143/360 (39%), Gaps = 8/360 (2%) Query: 1 MRETMLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 ++ M PQ + M I+ +I+ L+ ++ F A ++ +WP+ Sbjct: 4 LQRGMDLPQMLFSLMFILLMIIACLWVVQPFILGFAWASMVVIATWPLMIRLQQLLWGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMW 118 + + T+ ++ LFI+P+ L + +++ +P WL DIP G Sbjct: 64 SLAVIAMTILLLLLFIIPIALLVSSLIDNSAPVIAWATQ-RHLVLPDLAWLRDIPYAGRK 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + K + + + F A FG L L ++F ++ Y Sbjct: 123 LYSSYHKLIDGGGAAIMSQVQPYIGRTTGFFVAQAGHFGRFMLHLALMLLFSVL----LY 178 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + + + + + IR+ LG+ + A+ +G++ G ++G+ Sbjct: 179 WRGEQVGLGIRHFAYRMGGRRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAISGI 238 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P L V+ + ++ G I I+L G+ T L +W + +D LRP Sbjct: 239 PYATLLTVLMILTCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLVWSC-VVGTLDNVLRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 298 MLIRMGADLPMILILSGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWMHEAPAPDDDPET 357 >gi|300722815|ref|YP_003712107.1| putative transport protein [Xenorhabdus nematophila ATCC 19061] gi|297629324|emb|CBJ89923.1| putative transport protein [Xenorhabdus nematophila ATCC 19061] Length = 369 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 137/337 (40%), Gaps = 6/337 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + L F + A ++ +WP+ + I T+ ++ LF++P+ L Sbjct: 27 SFWVLSPFILGFIWAGMVVIATWPLLEKLQQRLWGKRWIAVSIMTLLLVLLFVLPIALLI 86 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 + L+ + +P WL+ +P G W + ++ ++ + Sbjct: 87 SSVVENSAPLIEWAKSPSALQLPQLNWLNQVPVIGDNLYLKWQELIADGSNMLLNKIPPY 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + A+ G L L +IF ++ Y G + + L Sbjct: 147 IGKTATWFFTQAANAGRFLLHLALMVIFSVL----LYWKGEQVMLSIRHFAIRLADKRGD 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + IR+ LG+ + A+ + + G +AG+P + L V + + G + Sbjct: 203 SAVLLAAQSIRAVALGVVVTALVQAIAGGIGLAIAGIPYPLILTVTMFVCCVAQLGPLLV 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +L G+ T L +W + L +D LRPFL+ LP + G++GG+ Sbjct: 263 LIPSIAWLYWTGDTTWGTILAIWS-LVLTTMDGVLRPFLIRLGADLPMVLILTGVIGGIL 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++G++GLFIGPV++A+ + + + + + KIS Sbjct: 322 SLGVIGLFIGPVVLAVSFRLLLAWMNEVPKPEGKISD 358 >gi|306838115|ref|ZP_07470972.1| transmembrane protein [Brucella sp. NF 2653] gi|306406852|gb|EFM63074.1| transmembrane protein [Brucella sp. NF 2653] Length = 361 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 151/355 (42%), Gaps = 7/355 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R M + ++ + + + L ++ VL A+I+ +P+ + Sbjct: 7 RVLMSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--A 119 A ++ + +CL I+P+L +F + E L ++ + +++ I + Sbjct: 67 AAFLSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + + + G FG L + + M+ LFF +R Sbjct: 124 EEWLKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFR 183 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ Sbjct: 184 DGADVGKKIRR-AIPLSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIE 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP Sbjct: 243 AALLWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRP 302 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 303 PLVGKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 357 >gi|126643157|ref|YP_001086141.1| hypothetical protein A1S_3142 [Acinetobacter baumannii ATCC 17978] Length = 329 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 81/314 (25%), Positives = 151/314 (48%), Gaps = 8/314 (2%) Query: 43 TSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 +WPIY + A + V+ + VP + E + L + Sbjct: 1 MTWPIYLRIQHFFGENRNNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVF 60 Query: 102 HG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 G + VP ++ ++P G S + + P S +L+++ + Sbjct: 61 SGHLSVPDFIRNLPFIGKEISRTLNEINTDPNSTIQNIAAWLQSH-----LSYGRVLLNE 115 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + + F I++LFFFYRDG +I Q+ E + + + R+ G+ Sbjct: 116 ISKNIVKLCFAILSLFFFYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVG 175 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + AI + ++ G +Y++AGVP+ + L + T ++A+IP G P+S+ V ++L +G A Sbjct: 176 LTAIAQAVLAGLSYFVAGVPNPMVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAI 235 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + LWG + + D +RP ++ G ++PFL FG++GG+ + GL+GLFIGPV++A++ Sbjct: 236 GVILWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLL 295 Query: 340 VIWKESIMAIKENK 353 IW+E + + + Sbjct: 296 AIWREWLHETIDPE 309 >gi|209516308|ref|ZP_03265165.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503244|gb|EEA03243.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 364 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 98/347 (28%), Positives = 173/347 (49%), Gaps = 7/347 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 21 ERLKKQKAASAALYIGLVLLALWVVRDFIVVVAWAGVVSIALWPLLHKVAGSRWFRGRTT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWA 119 LA + T+ + L ++P+ + E EL ++GI VP +++ +P G Sbjct: 81 VLATVFTLVIAVLVLLPVALGLAQALREAHELSEWFRGVQENGIAVPDFVNRLPFGVPQI 140 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W +L+ P + +K + + +FG L + FM++ LF ++ Sbjct: 141 TAWWQANLAQP----LRDSAAMKGLHSETVMTLGRQFGARALHAAMVFAFMLVTLFVIFQ 196 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +S L F + + +R T G+ ++ GEG++LG AY + GVP Sbjct: 197 AGPRLSGSLLKAARRGFGDSGADLVEQMATAVRGTVSGLIVVGAGEGVLLGFAYLVTGVP 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG +TAI AM+P API+F +++LL++G++ A L ++GAI +FI + +RP Sbjct: 257 HAALLGFVTAIAAMLPFCAPITFGLAALWLLVQGSVVPAAGLAVFGAIVVFIAEHFVRPV 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L+G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + Sbjct: 317 LIGNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTALV 363 >gi|254234725|ref|ZP_04928048.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126166656|gb|EAZ52167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 355 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 8/334 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + ++ L+ + G+P P W++ +P G W + + + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ G + R A G L ++ +I +FFFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGG-----ILELVLSLILIFFFYRDGPRLESIVHRALERLIGNR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P Sbjct: 194 AEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLL-MVPP 252 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG Sbjct: 253 LVWGPTTAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGG 312 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +GLF+GP+L+A+ + + I + Sbjct: 313 LLAFGFMGLFLGPILLAVAYNLLSDWIASTPRTP 346 >gi|293396334|ref|ZP_06640612.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291421123|gb|EFE94374.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 349 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 136/346 (39%), Gaps = 8/346 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I +I+ + ++ F A ++ +WP+ + + ++ T+ ++ LF Sbjct: 2 FIAIMIVACFWVVQPFILGFAWASMVVIATWPLLIKLQNLLWGRRSLAVLVMTLILIVLF 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQS 132 ++P+ L + +V+ + IP WL+ IP G S T S + Sbjct: 62 VMPIALLVNSVVDNSAPIVAWASTPGKVHIPDLAWLNSIPMIGDKVYSSYHTLINSGGGA 121 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + + F A+ G + L ++F ++ Y G ++ + Sbjct: 122 LIAKVQPYFGQTATWF-AAQAAHIGRFLMHCSLMVLFSVL----LYARGEQVALGIRHFA 176 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ + G+P+ L V+ I Sbjct: 177 VRLGAERGDAAVLLGGQAIRAVALGVVVTALVQSVLGAIGLAITGIPAATLLAVLMFIFC 236 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G I+L G+ T L +W + +D LRP L+ LP + Sbjct: 237 VAQLGPLPVLIPAIIWLYWSGDTTWGTVLLVWSC-VVGTLDNFLRPVLIRMGADLPMILI 295 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 296 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLDE 341 >gi|300716475|ref|YP_003741278.1| hypothetical protein EbC_18970 [Erwinia billingiae Eb661] gi|299062311|emb|CAX59428.1| uncharacterized protein [Erwinia billingiae Eb661] Length = 376 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 136/341 (39%), Gaps = 7/341 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I+ +I+ + ++ F A ++ +WP+ + + T+ ++ LF Sbjct: 23 FIILMIVACFWVVQPFVLGFAWASMVVIATWPLMIKLQGLLWGRRSLAVIAMTLLLILLF 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P+ L + +++ A +P W++ IP G + + S Sbjct: 83 VLPVSVLVNSLIDSSGPVIAWA-SAGHIQLPDMHWMNSIPLVGRKLFSAYHNLVQGGGSA 141 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + F+ A FG + L ++F ++ Y G + + Sbjct: 142 MMTKVQPYIGRTSGFLFAQAGHFGRFMMHLGLMLLFSVL----LYARGEQVGHGIRHFAF 197 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ +GL+ G ++G+P L V+ + + Sbjct: 198 RLASRRGDAAVLLAGQAIRAVALGVVVTALVQGLLGGIGLAISGIPYATVLTVVMILSCL 257 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G + ++L G+ T L +W + +D LRP L+ LP + Sbjct: 258 VQLGPLVVLIPAIVWLYWTGDTTWGTVLLIWSC-VVGTLDNVLRPMLIRMGADLPMILIL 316 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++GG+ G++GLFIGPV++A+ + + ++ Sbjct: 317 SGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWVHEAPAPED 357 >gi|187927640|ref|YP_001898127.1| hypothetical protein Rpic_0540 [Ralstonia pickettii 12J] gi|187724530|gb|ACD25695.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] Length = 349 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 145/351 (41%), Gaps = 5/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + Q + ++ + L + L FF V +I+ P+ + +++ + Sbjct: 2 DSGNDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A++ ++ + I+P++F+ + E+ ++ A + + + +P W + Sbjct: 62 ALVTLALIILIVILPVIFVAATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALP--TWVQQ 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L K + F A G + + M+ +FF RDG Sbjct: 120 LLAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ + + + + V+R+T G +A+ +G + G +W+ G+ Sbjct: 180 TEIGRRVRRALP-MDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGV 238 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + V++Y L+ G I+ L + + +VD LRP L Sbjct: 239 VLWGALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 VG K+P +GG+ G+ G IGP++ AL W E Sbjct: 299 VGKDTKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASWDIFARGQNE 349 >gi|296535339|ref|ZP_06897542.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] gi|296264338|gb|EFH10760.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] Length = 357 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 91/334 (27%), Positives = 154/334 (46%), Gaps = 7/334 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L+ F + +L A I+ F +WP Y + + S A++ M L +PLLF Sbjct: 27 IGCFLVLRPFLSALLWAAILAFCTWPAYRTLRDRLRLSPGLAALLMVTLEMLLVGLPLLF 86 Query: 81 LFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELWTKHLSHPQSLKILSE 138 +++ L S V G+P + WL IP G + E W L + Sbjct: 87 ATPIRAEDIEGLRSSVENLIASGLPGLSDWLGRIPWVGEFLRERWDALQLDFTPLTDMLR 146 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I + A + L +I I+ FFFYRDG ++ L+ L + A Sbjct: 147 PYAG-----VIAQQALGVLLAVLSGLAELILAILLSFFFYRDGPRMAAGLEGLVVRIAGA 201 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ ++ V G+ A+ +GL+ G W++GVP L VI I++++P GA Sbjct: 202 QARRLVQLTANVTTGVVYGLLGTAVAQGLMTGFGLWISGVPQPALLAVIAGIISVLPVGA 261 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ + +++L +G+ L ++GA + VD +RP+L+ LP L T G +G Sbjct: 262 PLVWLPAALWLFSQGSTGWGLFLLVYGAGGISSVDNVIRPWLISRGADLPLLLTILGALG 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GV G LGLF+GPVL+A+ + ++ + Sbjct: 322 GVFAFGFLGLFLGPVLLAVGFTLLRDWAEEEPQT 355 >gi|311279418|ref|YP_003941649.1| hypothetical protein Entcl_2111 [Enterobacter cloacae SCF1] gi|308748613|gb|ADO48365.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 374 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 134/358 (37%), Gaps = 7/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + + II+ L+ ++ F A I +WP+ Sbjct: 6 RPRDIPQILLSVLFLTLIIVACLWIVQPFILGFAWASTIVIATWPVLIRLQRILFGKRAL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ + LF++P+ L + LV + +P WL+ IP G Sbjct: 66 AVLVMTLLLFLLFVIPIALLVNSLVDGSLPLVHAITSGELTPPDLP-WLNSIPLIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G L L ++F + Y Sbjct: 125 GAWHGLLDMGGAAIMTKVKPYIGTTTTWFVGQAAHIGRFMLHCGLMLLFSAL----LYWQ 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEKVAWGVRYFATRLAAKRGDAAVLLAGQAIRAVALGVVVTALVQAVLGGIGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ ++ G I I+L G+ T L +W + +D +RP L Sbjct: 241 ATLLTVVMIFSCLVQLGPLIVLVPSIIWLYWSGDTTWGTVLLVWSC-VVGTMDNFIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPMILIISGVIGGLIAFGMIGLFIGPVLLAVTWRLFDTWMREVPPPSDNPEE 357 >gi|91778031|ref|YP_553239.1| hypothetical protein Bxe_B2098 [Burkholderia xenovorans LB400] gi|91690691|gb|ABE33889.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 368 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 6/343 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ML+ + +++ M++ ILV Y L F PV ALII + +WP+Y + + A Sbjct: 7 MLDRKRVIQAMLLAAILVLGYVVLWPFVIPVAWALIIAYVTWPLYCRLHALIRGRAWISA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ T+ V + +P+ L E L V G + VP +++ IP W Sbjct: 67 LLMTLLVGVVAFIPIASLISPVFREFLALYRNVAEYAASGPLRVPDFIARIP---WLGHS 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + +S ++ +G ++ AS G + + F + LFF YRDG Sbjct: 124 LQQLVSEFADDPQRLHAYITQSGDRWVGELASMVGS-VGRNAVKLGFATLTLFFAYRDGR 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ Q+ + + + V RS G+ + A+ +G + G YW AGV + + Sbjct: 183 ALLLQVQGVMRPVLGDRLDGYLSAIGGVTRSVVYGLALTAVVQGALAGLGYWAAGVKAPL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L +IT + A+IP G P + V + L+ GN+F L LWGA+ + VD +RP ++ Sbjct: 243 LLTIITTLAALIPFGTPFVWIPVGVGLIANGNMFAGVGLLLWGALVVSWVDNLIRPMVIS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +++PFL FG++GG+ G +GLF+GPV++A++ +W+E Sbjct: 303 NAVRVPFLLILFGVLGGIGAFGFIGLFVGPVVVAILLALWREW 345 >gi|304397632|ref|ZP_07379509.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304354804|gb|EFM19174.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 372 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 142/350 (40%), Gaps = 8/350 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ L I+ +I+ L+ ++ F A ++ +WP+ F + Sbjct: 7 RDMDLPQILFTLMFILLLIVACLWVVQPFILGFAWASMVVIATWPLMLKFQRLLWGRRSL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LFI+P+ L + +++ V H +P WL +IP G Sbjct: 67 AVIVMTLLLLLLFIIPIALLVSSLIDNSAPVIAWVTQG--HTMPKLTWLREIPMVGKKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + + F A FG + + ++F ++ Y Sbjct: 125 VSYDTLVASGGAGVMAKIQPYIGRTTGFFVAQAGHFGRFMIHLGVMLLFSVL----LYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +Q + + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 181 GEQAAQGIRHFAFRMAGRRGDAAVLLAAQSIRAVALGVVVTALVQGVLGGIGLAISGIPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G + IYL G+ T L +W + +D LRP L Sbjct: 241 ATLLTVLMILCCLVQLGPLLVLVPAIIYLYWSGDTTWGTVLLVWSC-VVGTMDNVLRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + LP + G++GG+ G++GLFIGPV++A+ + + Sbjct: 300 IRMGADLPMILILSGVIGGLFAFGMIGLFIGPVVLAVSYRLVSVWVHEAP 349 >gi|94312981|ref|YP_586190.1| hypothetical protein Rmet_4053 [Cupriavidus metallidurans CH34] gi|93356833|gb|ABF10921.1| conserved hypothetical protein; putative inner membrane protein (permease) [Cupriavidus metallidurans CH34] Length = 361 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 144/345 (41%), Gaps = 5/345 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + + + L F+ V ++ P+ + + A++ + V+ Sbjct: 12 FLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNNVAALLTLLLVL 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L I+PL + + + L + G+ R + +P + L K Sbjct: 72 VLVILPLTIITASLINQGVSLYDSIRSGQLNFGVYFQRAVDALP--PYVRTLLAKVDLTS 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + F+ A G + +S M+ LFF RDG +S+++ + Sbjct: 130 IADLQEKLSASALQASQFVATRALSIGQNTAQFVISFGIMLYLLFFLLRDGPRLSRKIRT 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L Y + + + V+R+T G +A+ +G + G + + G+ + GVI A Sbjct: 190 AVP-LSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQGALLWGVIMAF 248 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++++P GA + + V++Y L+ G+ L +G + + +VD LRP LVG ++P Sbjct: 249 LSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPILVGKDTQMPD 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ GL G IGP++ AL W + I EN + Sbjct: 309 YVVLISTLGGMALFGLNGFVIGPLIAALFIACWDLNAHGIDENGD 353 >gi|82701870|ref|YP_411436.1| hypothetical protein Nmul_A0737 [Nitrosospira multiformis ATCC 25196] gi|82409935|gb|ABB74044.1| Protein of unknown function UPF0118 [Nitrosospira multiformis ATCC 25196] Length = 356 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 152/353 (43%), Gaps = 6/353 (1%) Query: 5 MLNPQGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M +P+ + ++ +I VS ++ L F+ V A ++ P + + + Sbjct: 1 MNSPELRQKAFLLMLIAVSVAFIWILLPFYGTVFWAAVLAIIFTPFHRKLQAALGQHRNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + ++ + I+P+ + + E + K+ + + ++ + Sbjct: 61 AAFTTLLLILVIVILPVTLMTISLLQEGTIVYQKIRSGELNFGMYFQQIASASPPWLVNL 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L L++ L+ + + + G F+ A G ++ +S M+ LFF RDG Sbjct: 121 LDRSGLTNMAELQDMLSSGV-LRGSQFVATHALSLGQNAFEFLVSFGIMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ ++ L + + +S VIR+T G +A +G + G ++ G+ Sbjct: 180 DNLAAKIKQ-AMPLTMEHKRHLSSKFTTVIRATVKGNVAVAAIQGALGGVVFYFLGIQGA 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A +++IP GA + + V+IY L G ++ T L +G + +VD LRP L Sbjct: 239 LLWGFMMAFLSLIPAVGAGLIWIPVAIYFLFTGAVWQGTVLIAFGVFVIGLVDNLLRPVL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG K+P +GG+ GL G IGPV+ AL W A+ + Sbjct: 299 VGRDTKMPDYVVLISTLGGLVLFGLNGFVIGPVIAALFMSAWDLFAAAMDTPR 351 >gi|256828705|ref|YP_003157433.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256577881|gb|ACU89017.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 365 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 73/331 (22%), Positives = 134/331 (40%), Gaps = 5/331 (1%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F+ + A IIG P+Y + + A+ + + I+P LF+ E Sbjct: 37 PFWGAIFWACIIGLIFSPMYQRLLRMGKPKPNLAALGTLLICFVIGIIPSLFVIISFFRE 96 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L +++ + + + S++ F T+ + Sbjct: 97 GASLYNRLKSGEFDIADRIDKVQT--AFPSIKNFFDRFDLDINSIQAQLSDFALTS-SGY 153 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I + A G L + +++ M+ FF RDG + L L + Sbjct: 154 IAQNALALGQGTLQFFVALGLMLYMAFFMLRDGDKLVATLVRALP-LGNEREYLLFNKFA 212 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 +V+R+T G ++A +G++ G +W+ + + GV+ ++++IP GA + + V+I Sbjct: 213 EVVRATVKGNLLVAAVQGILGGFIFWVLDIHGALLWGVVMTLLSLIPVIGAGLIWGPVAI 272 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL G + + L +GA + + D LRP LVG KLP +GG G+ G Sbjct: 273 YLFAIGELSHGVILVAYGAGVIGLADNILRPLLVGRDTKLPDYIVLLSTLGGFSLFGMNG 332 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++ AL W+ I +K +S Sbjct: 333 FVLGPLVAALFIAFWEIFIREFNTSKSGNAS 363 >gi|156935110|ref|YP_001439026.1| hypothetical protein ESA_02961 [Cronobacter sakazakii ATCC BAA-894] gi|156533364|gb|ABU78190.1| hypothetical protein ESA_02961 [Cronobacter sakazakii ATCC BAA-894] Length = 362 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 145/353 (41%), Gaps = 6/353 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M + + + I+ + +VS+ F +K + + VL A+I+ +PI + Sbjct: 1 MNSKEMSRAFFILILFIVSILFFNLVKPYLSAVLWAVILAVIFYPIKRRLCHMMNGRNNI 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +++ V + L VPL + + E + S V N + + I WA Sbjct: 61 ASLLTVVLICLLVFVPLAVVASSLVSEFNAVYSDVQANNTTLPTLLADVVRILP-DWAQR 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + + G ++ + M+ LFF +DG Sbjct: 120 MLAENQLDNAAAIQQKISGVALKGSQYVAGSIFLISRNTFSVVIGFGIMLYLLFFLLKDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + S L +++ R V R+T G ++A+ +G++ G A++ AG+ + Sbjct: 180 SRLVSVVLSAVP-LSDKVKQRLFRRFAAVARATVKGTVVVAVVQGILGGVAFYFAGIGAS 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A ++++P GA + + IYL G I A L + + + + D LRP L Sbjct: 239 ILWGSLMAFLSLVPAVGAALIWVPAVIYLFTTGAIIKAVLLTAFFVVVVGLADNLLRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG I++P +GG+ G+ G +GP++ AL W + Sbjct: 299 VGKDIRMPDWLILLSTLGGLEVYGINGFVVGPLIAALFVTCWNTFSAGPGRTR 351 >gi|307727746|ref|YP_003910959.1| hypothetical protein BC1003_5755 [Burkholderia sp. CCGE1003] gi|307588271|gb|ADN61668.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 369 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 174/347 (50%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 26 ERVKKQKAASLALYIGLVLLALWVVRDFLPVVGWAGVLAIALWPLLRKVEGSRWLSGRTT 85 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A T+++ L ++P+ + E +L A ++GI +P ++ +P G+ + Sbjct: 86 LIAAALTLAIALLVVLPVGVGIAQALREAHDLSEWFKAAQENGIAMPDFIHRLPFGVQQA 145 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + P + +K + FG + FM++ LF ++ Sbjct: 146 EAWWQAYLAP---PLRDSAAMKGLHSTTVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQA 202 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L + F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 203 GPRLSGALARGLQRGFGEDGAQLVQRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPH 262 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +IT+I AM+P API+F+ +++L +G++ A L ++G+I +F+ + +RP L Sbjct: 263 VALLALITSIAAMLPFCAPITFSLAALWLFSQGSVAGAIGLLVFGSIVVFVAEHFVRPVL 322 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + + Sbjct: 323 IGNSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTDLVQ 369 >gi|296159881|ref|ZP_06842702.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295889864|gb|EFG69661.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 360 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 93/346 (26%), Positives = 174/346 (50%), Gaps = 7/346 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFL 62 + + + + ++L++L+ ++ F A V A +I WP+ +T + Sbjct: 19 LKKQKTASLALYIGLVLLALWVVRDFIAVVAWAGVIAIALWPLLRKVEGNRWFTGRTTLI 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASE 121 A + T+ + L ++P+ + E +L A ++GIP+P ++ +P G S Sbjct: 79 AAVLTLLIALLVVLPVGIGIAQALREAHDLNEWFKTAQENGIPLPDFIQRLPFGVQQISA 138 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +L+ P + +K + FG + FM++ LF ++ G Sbjct: 139 WWQANLTQP----LRESAAMKGLHSPAVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQAG 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 195 PRLSGALLKGMRRGFGDDGAQLLQRMAAAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHV 254 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +TAI AM+P AP++F +++LL++G++ A L ++G++ +FI + +RP L+ Sbjct: 255 ALLAFVTAIAAMLPFCAPLTFGIAALWLLLQGSVAAAIGLAVFGSVVVFIAEHFVRPVLI 314 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 315 GNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVQ 360 >gi|292488148|ref|YP_003531029.1| hypothetical protein EAMY_1671 [Erwinia amylovora CFBP1430] gi|292899359|ref|YP_003538728.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199207|emb|CBJ46322.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553576|emb|CBA20621.1| UPF0118 inner membrane protein ydiK [Erwinia amylovora CFBP1430] gi|312172286|emb|CBX80543.1| UPF0118 inner membrane protein ydiK [Erwinia amylovora ATCC BAA-2158] Length = 374 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 131/352 (37%), Gaps = 7/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMIKIQRLLWGRRALAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T+ ++ +FI+P+ L + +++ + +P WL P G + Sbjct: 70 MTLLLILVFIIPVALLVNSLIENSAPMIAWLGSG-HLQMPDLHWLRSTPLVGRKLYSAYH 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + F A FG + L ++F ++ Y G + Sbjct: 129 NLFAGGGSALLAQVQPYIGRTTGFFFAQAGHFGRFMMHLGLMLLFSVL----LYWRGEQV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q + L + + IR+ LG+ + A+ +G++ G ++G+P L Sbjct: 185 GQGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAISGIPFATIL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + ++ G I I+L G+ T L +W + +D LRP L+ Sbjct: 245 TVLMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSC-VVGTLDNVLRPMLIRMG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 304 ADLPMILILSGVIGGLVAFGMIGLFIGPVVLAISYRLVSVWVHETPAPHENP 355 >gi|189022920|ref|YP_001932661.1| hypothetical protein BAbS19_II07200 [Brucella abortus S19] gi|189021494|gb|ACD74215.1| hypothetical protein BAbS19_II07200 [Brucella abortus S19] Length = 361 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 5/354 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R M + ++ + + + L ++ VL A+I+ +P+ + Sbjct: 7 RVLMSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWAS 120 A ++ + +CL I+P+L +F + E L ++ + R ++ +P Sbjct: 67 AAFLSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALPES--LE 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + + G FG L + + M+ LFF +RD Sbjct: 125 EWLKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRD 184 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + Sbjct: 185 GADVGKKIRR-AIPLSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEA 243 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP Sbjct: 244 ALLWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPP 303 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 304 LVGKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 357 >gi|330428771|gb|AEC20105.1| hypothetical protein PT7_1565 [Pusillimonas sp. T7-7] Length = 353 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 6/355 (1%) Query: 5 MLNPQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M N R ++ + VS+ + L ++ + I+ P+ S + K Sbjct: 1 MDNSNLYFRSFLLLLAAVSIAFIWILLPYYGAIFWGAILAIIFMPLNRSLLGKMRGRRNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+ + ++ + I+P++ + + E + ++ + + + Sbjct: 61 AALATLLIIILIVIIPMILITASLLQEGASVYQRISSGQLNLGAYFEQIMNALPESVHDV 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + SL+ + + G ++ A G + +S+ M+ LFF RDG Sbjct: 121 MMRFGVGDVFSLREKLSS-MALEGSKYLASQAVNVGQNTFQFLISMGIMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S+++ L L + + + R V+R+T G ++A +G + G +W G+ Sbjct: 180 GSLARHSKHLIP-LSEEHKQHLFRKFATVVRATVKGNIVVAATQGTLGGLMFWFLGIQGA 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + GV+ A ++++P GA I + V++Y L+ G ++ L L+G + + +VD LRP L Sbjct: 239 LLWGVLMAFLSLLPAVGAAIIWVPVAVYFLVTGAVWQGVTLTLFGVLVIGLVDNILRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 VG K+P +GG+ GL G IGP+ AL W AI+ N E+ Sbjct: 299 VGKDTKIPDYVILVSTLGGLAVFGLNGFVIGPLFAALFIACWDLFPSAIRMNHEE 353 >gi|146311402|ref|YP_001176476.1| putative inner membrane protein [Enterobacter sp. 638] gi|145318278|gb|ABP60425.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 371 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 141/359 (39%), Gaps = 8/359 (2%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + II+ L+ ++ F A + +WP++ Sbjct: 4 LRQPRDVAQILLSVLFLAIIIIACLWIVRPFVLGFAWAGTVVIATWPLFIRLQKLLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMW 118 + V+ T+ + +FI+P+ L + ++ V + + IP WL+ +P G Sbjct: 64 SLAVVVMTLFLFLVFIIPIALLVNSLVDTSGPVIRSV-TSGEMTIPDLAWLNSVPVIGAK 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W L S + + A+ G + L ++F + Y Sbjct: 123 LYSGWHSLLEMGGSAIMTKVRPYIGTTTTWFVGQAAHVGRFVMHCALMLVFSAL----LY 178 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G ++ + L + + +R+ LG+ + A+ + ++ G ++GV Sbjct: 179 WRGEQVALGVRHFATRLAGQRGDAAVLLAGQAVRAVALGVVVTALVQAVLGGIGLAISGV 238 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P VI + ++ G + I+L G+ T L +W + +D +RP Sbjct: 239 PYATIFTVIMILTCLVQLGPLLVLIPCIIWLYWSGDTTWGTVLLVWSC-VVGTMDNVIRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + I Sbjct: 298 MLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEIPPPATDPD 356 >gi|226943150|ref|YP_002798223.1| hypothetical protein Avin_10160 [Azotobacter vinelandii DJ] gi|226718077|gb|ACO77248.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 364 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 81/331 (24%), Positives = 153/331 (46%), Gaps = 7/331 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F + + A ++ F SWP+ ++ + A + T + L VPLL + Sbjct: 22 WVLLPFASALFWAAVLAFASWPLMRLLTARLNGRESVAAGLLTAGWVILVAVPLLLFGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 + ++EL + G+P P WL+ +P G +LW +L + +L Sbjct: 82 LVDYIRELTGLINTLRLEGLPPPPEWLAGMPLFGDELVDLWRTVDQQGLALFATLKPYLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A G + L + ++ +FFFYRDG + + + SL L + Sbjct: 142 QVGNWLLARSAKLAGGM-----LELALSLVLVFFFYRDGPRLERFVQSLLTRLIGERAEH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A + + +W+AGVP + LG++T +++IP G P+++ Sbjct: 197 YLELVAATVQRVVNGVIGTAAAQSALALIGFWIAGVPGALLLGLLTFALSLIPMGPPLAW 256 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +L+ +G+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 257 IPATAWLVWQGDYGYAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVVVLLGVFGGIYA 316 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +GLF+GP L+A+ + + + + + Sbjct: 317 FGFMGLFLGPTLLAVAYSLLSDWVSEARPAE 347 >gi|121594188|ref|YP_986084.1| hypothetical protein Ajs_1821 [Acidovorax sp. JS42] gi|120606268|gb|ABM42008.1| protein of unknown function UPF0118 [Acidovorax sp. JS42] Length = 381 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 5/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + +++ P++ + A+ + + I+P+ + Sbjct: 50 AFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI 109 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + E + G + + L+ +P W EL + ++ T Sbjct: 110 GASLVQEASVAYERARSGQLNFGAYLQQVLAALP--PWMLELLDRFHLTTRAELQARLTT 167 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + F+ A G L + +S M+ LFF RDG ++ ++ L + Sbjct: 168 IGAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFLLRDGARLAARIREAIP-LDARHK 226 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 ++++ VIR+T G ++A +G + G +WL + V GV+ A ++++P GA Sbjct: 227 EQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVMWGVLMAFLSLLPAVGAS 286 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+IY L G A L +G + +VD LRP LVG KLP +GG Sbjct: 287 LIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGG 346 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GL G IGP++ AL W + Sbjct: 347 MALFGLTGFVIGPMIAALFIATWDLFAPHDGAER 380 >gi|298291255|ref|YP_003693194.1| hypothetical protein Snov_1260 [Starkeya novella DSM 506] gi|296927766|gb|ADH88575.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 370 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 142/330 (43%), Gaps = 3/330 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + L+ L ++ +L A+I+ P+ ++ A ++ ++ +C+ Sbjct: 33 VLVIGVTAAFLWLLLPYYGAILWAVILAILFDPLRRRLEARLGGCRNLAAALSVLACICI 92 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P + E L +++ + + T +L + Sbjct: 93 VVIPGAAILASLAQEAASLYNRINTREFDLATLLGEIQGALPPFVEKAFATLNLGDFVEI 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +FL + A G + +S+ M+ LFF +RDG ++ + Sbjct: 153 RTRLTSFLMY-ASQEVATRALSIGQNTAQFFVSLGVMLYLLFFLFRDGRLLANLIRKASP 211 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + I V+ +T G IIA +G + G A+W+ G+ + + GV+ A +++ Sbjct: 212 -LSGRHTDHILEKFSSVVAATVKGNIIIAAIQGGIGGIAFWMLGIQAALLWGVLMAFLSL 270 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + + V++Y L+ + F LF G + + VD LRP LVG +LP Sbjct: 271 LPAIGAALVWVPVAVYFLLAADYFRGVVLFAVGVLVISTVDNLLRPPLVGRGTRLPDYVV 330 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 VGG+ +G+ G IGP++ AL +W Sbjct: 331 LISTVGGLSVIGMNGFVIGPLIAALFIAVW 360 >gi|270261590|ref|ZP_06189863.1| putative inner membrane protein [Serratia odorifera 4Rx13] gi|270045074|gb|EFA18165.1| putative inner membrane protein [Serratia odorifera 4Rx13] Length = 366 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 140/347 (40%), Gaps = 8/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I+ + ++ F A ++ +WP+ + ++ T+ ++ L Sbjct: 18 LFIVIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKLLWGRRSLAVLVMTLLLILL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 FI+P+ L + +V+ + IP WL IP G + T + Sbjct: 78 FILPISLLVSSVVDNSAPVVAWASTPGKLHIPDLAWLQSIPMIGNKVYNSYHTLVNAGGA 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + F+ + A+ G L L ++F ++ Y G ++ + Sbjct: 138 ALLAKIQPYFGQTATWFVAQ-AAHIGRFLLHCTLMLLFSVL----LYARGEQVALGIRHF 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + IR+ LG+ + A+ + ++ G ++G+P+ L V+ I Sbjct: 193 AARLAAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVSGIPAATLLTVLIFIC 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I+L G+ T L +W + +D LRP L+ LP L Sbjct: 253 CVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSC-VVATLDNVLRPVLIRMGADLPMLL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 312 ILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMDEAPEPTADLDE 358 >gi|260597659|ref|YP_003210230.1| putative inner membrane protein [Cronobacter turicensis z3032] gi|260216836|emb|CBA30340.1| UPF0118 inner membrane protein ydiK [Cronobacter turicensis z3032] Length = 375 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 151/361 (41%), Gaps = 10/361 (2%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ M PQ ++ + + +I+ L+ ++ F A + +WP+ Sbjct: 7 LRQPMDVPQILLSVLFLSVMIIACLWIVQPFILGFAWAGTVVIATWPLLLRLQKMLWGRR 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + ++ LF++P+ L + + + + Q IP WL IP Sbjct: 67 SLAVLVMVLILIMLFVIPVALLVNSLVDSSGPFIHWL-TSGQMTIPDLAWLHSIPYIGDK 125 Query: 120 SELWTKHL--SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L +L S ++ +L T FI + A+ G + + L ++F + Sbjct: 126 LYLGWHNLVESGGSAIMAKVRPYLGTTTGWFIGQ-AAHLGRLLMHCGLMLLFSAL----L 180 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y G ++ + L + + IR+ LG+ + A+ +G++ G ++G Sbjct: 181 YWRGEQVALGIRHFAIRLASKRGDAAVVLAGQAIRAVALGVVVTALVQGVLGGIGLAISG 240 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P L V+ + ++ G I+L G+ T L +W A + +D +R Sbjct: 241 IPYATLLTVVMILSCLVQLGPLPVLVPAIIWLYWSGDATWGTVLLVWSA-VVGTLDNIIR 299 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + +E Sbjct: 300 PMLIRMGADLPMVLILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSVWVSEAPLPEENSK 359 Query: 358 S 358 + Sbjct: 360 T 360 >gi|254712287|ref|ZP_05174098.1| hypothetical protein BcetM6_02689 [Brucella ceti M644/93/1] gi|254715358|ref|ZP_05177169.1| hypothetical protein BcetM_02704 [Brucella ceti M13/05/1] Length = 352 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 61 LSVLMCICLVIIPMLAVFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 118 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 178 DVGKKIRR-AIPLSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LV Sbjct: 237 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|23500209|ref|NP_699649.1| hypothetical protein BRA0460 [Brucella suis 1330] gi|161620528|ref|YP_001594414.1| hypothetical protein BCAN_B0462 [Brucella canis ATCC 23365] gi|254699715|ref|ZP_05161543.1| hypothetical protein Bsuib55_02471 [Brucella suis bv. 5 str. 513] gi|254702852|ref|ZP_05164680.1| hypothetical protein Bsuib36_02714 [Brucella suis bv. 3 str. 686] gi|254706027|ref|ZP_05167855.1| hypothetical protein BpinM_03248 [Brucella pinnipedialis M163/99/10] gi|254720517|ref|ZP_05182328.1| hypothetical protein Bru83_13551 [Brucella sp. 83/13] gi|256015243|ref|YP_003105252.1| hypothetical protein BMI_II457 [Brucella microti CCM 4915] gi|256029693|ref|ZP_05443307.1| hypothetical protein BpinM2_03388 [Brucella pinnipedialis M292/94/1] gi|256157846|ref|ZP_05455764.1| hypothetical protein BcetM4_03193 [Brucella ceti M490/95/1] gi|256253192|ref|ZP_05458728.1| hypothetical protein BcetB_02609 [Brucella ceti B1/94] gi|260167217|ref|ZP_05754028.1| hypothetical protein BruF5_02324 [Brucella sp. F5/99] gi|23463812|gb|AAN33654.1| membrane protein, putative [Brucella suis 1330] gi|161337339|gb|ABX63643.1| Hypothetical protein BCAN_B0462 [Brucella canis ATCC 23365] gi|255997903|gb|ACU49590.1| hypothetical protein BMI_II457 [Brucella microti CCM 4915] Length = 352 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 118 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 178 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LV Sbjct: 237 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|251789301|ref|YP_003004022.1| putative inner membrane protein [Dickeya zeae Ech1591] gi|247537922|gb|ACT06543.1| protein of unknown function UPF0118 [Dickeya zeae Ech1591] Length = 370 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 128/340 (37%), Gaps = 6/340 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ + ++ T+ ++ L Sbjct: 19 LFIGILIIACFWVVQPFILGFAWASMVVIATWPLLIRLQQMLWGYRSLAVIVMTLLLVLL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F+ P L + L+S + + P WL IP G W Sbjct: 79 FVFPTSILVSSVIDNASNLISWISAQGRLSPPELDWLQSIPLVGAKLHSSWHSLAHSGGP 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ A+ G + L ++F ++ Y G ++ + Sbjct: 139 ALMAKIQPYIGQTASWVVSQAAHIGRFLMHCALMVLFSVL----LYSKGDQVALGVRRFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G LAG+P L V+ + Sbjct: 195 IRLGRQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLTVLMFLSC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G I+L G+ T L +W + +D +RP L+ LP L Sbjct: 255 VAQLGPLTVLIPAIIWLYWSGDTTWGTILLIWSC-VVGTLDNIIRPLLIRMGADLPMLLI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPV++A+ + + E Sbjct: 314 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKESPEP 353 >gi|323968456|gb|EGB63862.1| ydiK protein [Escherichia coli M863] gi|327252805|gb|EGE64459.1| hypothetical protein ECSTEC7V_2050 [Escherichia coli STEC_7v] Length = 370 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 137/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGTKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEE 357 >gi|91775579|ref|YP_545335.1| hypothetical protein Mfla_1226 [Methylobacillus flagellatus KT] gi|91709566|gb|ABE49494.1| protein of unknown function UPF0118 [Methylobacillus flagellatus KT] Length = 352 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 3/341 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ + + L F+ V +I+ P+Y + A+ + + + Sbjct: 13 FLLLLVSAGLIIILLPFYGAVFWGVILSILFTPLYRRLLVTTRNRKNLAALGTLSACIII 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 IVP++ + + E L K+ + + + D L LS QS Sbjct: 73 VIVPVIIIASSLVHEGTMLFQKIKTGQINPALYTQQILDATPAPVHRILERVGLSDVQSF 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G + A G + + M+ +FF RDG S+S ++ Sbjct: 133 QEKLSQ-LAMEGSQLLATKALSIGQNTFQFVVGFAVMLYLMFFLLRDGSSLSIRVKQAIP 191 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + + VIR+T G ++AI +G + G +W+ G+ + + VI A +++ Sbjct: 192 -LSAEHKRHLFNKFTTVIRATVKGNILVAITQGALGGLIFWILGIQAALLWAVIMAFLSL 250 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + + V++Y L G I+ L +G + +VD LRP LVG KLP Sbjct: 251 LPAVGASLIWAPVAVYFLATGAIWQGVILIAFGVFVIGLVDNILRPILVGKDTKLPDYVV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +GG+ GL G IGP++ AL +W A ++ Sbjct: 311 LISTLGGMAVFGLNGFVIGPLIAALFITMWDIFSTARPLDR 351 >gi|218705186|ref|YP_002412705.1| putative inner membrane protein [Escherichia coli UMN026] gi|293405185|ref|ZP_06649177.1| inner membrane protein [Escherichia coli FVEC1412] gi|298380829|ref|ZP_06990428.1| inner membrane protein [Escherichia coli FVEC1302] gi|300898531|ref|ZP_07116864.1| hypothetical protein HMPREF9552_02700 [Escherichia coli MS 198-1] gi|301026918|ref|ZP_07190314.1| hypothetical protein HMPREF9534_05215 [Escherichia coli MS 69-1] gi|218432283|emb|CAR13173.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|291427393|gb|EFF00420.1| inner membrane protein [Escherichia coli FVEC1412] gi|298278271|gb|EFI19785.1| inner membrane protein [Escherichia coli FVEC1302] gi|300357795|gb|EFJ73665.1| hypothetical protein HMPREF9552_02700 [Escherichia coli MS 198-1] gi|300395265|gb|EFJ78803.1| hypothetical protein HMPREF9534_05215 [Escherichia coli MS 69-1] Length = 370 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 137/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEE 357 >gi|307131465|ref|YP_003883481.1| putative inner membrane protein [Dickeya dadantii 3937] gi|306528994|gb|ADM98924.1| predicted inner membrane protein [Dickeya dadantii 3937] Length = 367 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 131/353 (37%), Gaps = 6/353 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + L I +I+ + ++ F A ++ +WP+ S + Sbjct: 8 QRFDLARILFSLLFIGILIIACFWVVQPFILGFAWASMVVVATWPLLIRLQQMLWGSRSL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LF+ P L + L+S + + P WL IP G Sbjct: 68 AVLVMTLLLVLLFVFPTSILVSSVIDNASNLISWIGAQGRITPPELDWLQSIPLVGAKLH 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + ++ A+ G + L ++F ++ Y Sbjct: 128 SSWHSLAHSGGPALMAKIQPYIGQTASWVVSQAAHIGRFLMHCTLMVLFSVL----LYSK 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + AI + ++ G LAG+P Sbjct: 184 GDQVALGVRRFAIRLGRQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLALAGIPY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + + G I+L G+ T L +W + +D +RP L Sbjct: 244 TTLLTVLMFLSCVAQIGPLTVLIPAIIWLYWSGDTTWGTILLIWSC-VVGTLDNIIRPLL 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + LP L G++GG+ G++GLFIGPV++A+ + + E Sbjct: 303 IRMGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKESPEPP 355 >gi|146282264|ref|YP_001172417.1| putative lipoprotein [Pseudomonas stutzeri A1501] gi|145570469|gb|ABP79575.1| lipoprotein, putative [Pseudomonas stutzeri A1501] gi|327480512|gb|AEA83822.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166] Length = 364 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 76/326 (23%), Positives = 143/326 (43%), Gaps = 8/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F + + A ++ F SWP+ ++T A + T S M L VPL++L + Sbjct: 22 WVLAPFASALFWAAVLAFASWPVMRLLTRWLNGNATLAAGLLTFSWMVLVAVPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 ++++ + + G+P P WL ++P G W +L ++ Sbjct: 82 IADQIRDANALLHDLQVEGLPPAPEWLGELPLIGDSLVNFWNTVDEQGTALIASIRPYIG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R A G + L + ++ +FFFYRDG +S + SL L Sbjct: 142 QVANWLLVRSARIGGGM-----LELALSLVLVFFFYRDGPRLSAFVHSLLHRLIGDRADH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A + ++ + +AG+P + LG++T + I P+ + Sbjct: 197 YLELVAGTVQRVVNGVIGTAAAQAILAYIGFLIAGIPGALVLGLLTFACSFI-MVPPLIW 255 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +L +G+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 256 GPAVAWLAWQGDYGMAVFLGIWGMFVISGVDNVLKPYLISRGGNLPLVVVLLGVFGGILA 315 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMA 348 G +GLF+GP L+A+ + + ++ Sbjct: 316 FGFMGLFLGPTLLAVAYSLLGDWLIK 341 >gi|146282661|ref|YP_001172814.1| hypothetical protein PST_2313 [Pseudomonas stutzeri A1501] gi|145570866|gb|ABP79972.1| membrane protein, putative [Pseudomonas stutzeri A1501] Length = 337 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 143/326 (43%), Gaps = 3/326 (0%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + L + L F+ V A+I+ P+ + + A+ + + + ++P Sbjct: 1 MVSLAFGWILLPFYGAVFWAVILAIIFAPLQRYLYRRFSQRRNLTALFTLLVCLLVAVLP 60 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + E L ++ + L ++ +L S++ Sbjct: 61 VILITGMLVQEGATLYKQIESGELDIGRLVSGLRELLPQSVQLQLQRFGFGDLDSMRERL 120 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G F+ A FG + +S M+ LFFF RDG + ++ L Sbjct: 121 AS-GALEGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVARIRK-AIPLSD 178 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 A +++ +V+R+T G ++A+ +G + G + + G+ + GV+ A ++++P Sbjct: 179 AQKRRLFNKFTRVVRATVKGNIVVAVTQGALGGIIFAVLGISGALLWGVLMAFLSLLPAV 238 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 GA + +T V+IY L+ G I+ L L+G + + +VD LRP LVG K+P Sbjct: 239 GAGLIWTPVAIYFLMTGAIWQGVILTLYGVLVIGLVDNILRPILVGKDTKMPDYVVLIST 298 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIW 342 +GG+ GL G IGP++ AL W Sbjct: 299 LGGLALFGLNGFVIGPLVAALFISTW 324 >gi|261217086|ref|ZP_05931367.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261319956|ref|ZP_05959153.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260922175|gb|EEX88743.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292646|gb|EEX96142.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 354 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 63 LSVLMCICLVIIPMLAVFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 120 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 238 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LV Sbjct: 239 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLV 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 350 >gi|167583840|ref|ZP_02376228.1| hypothetical protein BuboB_00802 [Burkholderia ubonensis Bu] Length = 350 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 138/346 (39%), Gaps = 3/346 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q ++ + + + L FF V I+ P+ ++ + A++ Sbjct: 5 NDHQKFFYLLLFVVTVGLCWILTPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + + L Sbjct: 65 TLSLIILIVILPLVFVTATLVQEIAYVYQEIKTAQPNYTQYYQDIIHALPTSIQRLLAKY 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ ++ F+ A G + +S M+ +FF RDG I Sbjct: 125 GVTNLTGIQKKLTD-GAAQISQFVAAQALVIGQNTFQFVISFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G + G +W+ G+ V Sbjct: 184 RRVRRALP-LDDEHKHLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWS 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + +IY L+ I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGAGLVWVPAAIYFLMIDEIWKCVILVAFCGGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+P +GG+ G+ G IGP++ AL W A + Sbjct: 303 TKMPDWVVLLSTLGGMALFGINGFVIGPLIAALFMASWDIFARAEQ 348 >gi|187478630|ref|YP_786654.1| membrane protein [Bordetella avium 197N] gi|115423216|emb|CAJ49747.1| putative membrane protein [Bordetella avium 197N] Length = 374 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 144/343 (41%), Gaps = 5/343 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L +++ + + ++ L F+ V I+ P++ + Sbjct: 2 QQRLQHSRSFIALLIAVSIAFIWLLWPFYGAVFWGTILAVVFAPLHRRLARRLAPRGNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASE 121 A I+ + V+ + I+PL+ + + E L ++ + G+ + ++ +P Sbjct: 62 AFISLLVVLLVAIIPLILITGSLIQEGAGLYQRMRSGSVDFGLYFQQVMNAMP--PMVHS 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + F+ G + +S M+ LFF RDG Sbjct: 120 LLARFDLTELGSVQAKLSNGAMQLSQFMATQLLNVGQDTAQFLVSFGVMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S +L L Y + + R V+R+T G +A +G + G +W+ G+ Sbjct: 180 PILSSRLLLALP-LEEEYKRHLFRKFTTVVRATVKGNIAVAAIQGALGGVIFWVLGIQGA 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + GV+ A ++++P GA + + V+IY L+ G I+ L L+G + + +VD LRP L Sbjct: 239 LLWGVVMAFLSLLPAVGAGLIWLPVAIYFLVTGAIWQGVVLILFGMLVIGMVDNVLRPVL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VG KLP +GG+ GL G IGP++ AL W Sbjct: 299 VGKDTKLPDYVILISTLGGMALFGLNGFVIGPLIAALFVACWD 341 >gi|308186662|ref|YP_003930793.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] gi|308057172|gb|ADO09344.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] Length = 372 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 142/350 (40%), Gaps = 8/350 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ L I+ +I+ L+ ++ F A ++ +WP+ F + Sbjct: 7 RDMDLPQILFTLMFILLLIVACLWVVQPFILGFAWASMVVIATWPLMLKFQRLLWGRRSL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LFI+P+ L + +++ V H +P WL D+P G Sbjct: 67 AVIVMTMLLLLLFIIPIALLVSSLIDNSAPVIAWVTQG--HTMPQLLWLRDVPMVGKKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + + F A FG + + ++F ++ Y Sbjct: 125 VSYDTLVASGGAGIMAKIQPYIGRTTGFFVAQAGHFGRFMIHLGVMLLFSVL----LYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +Q + + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 181 GEQAAQGIRHFAFRMAGRRGDAAVLLAAQSIRAVALGVVVTALVQGVLGGIGLAISGIPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G + IYL G+ T L +W + +D LRP L Sbjct: 241 ATLLTVLMILCCLVQLGPLLVLVPAIIYLYWSGDTTWGTVLLVWSC-VVGTMDNVLRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + LP + G++GG+ G++GLFIGPV++A+ + + Sbjct: 300 IRMGADLPMILILSGVIGGLFAFGMIGLFIGPVVLAVSYRLVSVWVHEAP 349 >gi|260568237|ref|ZP_05838706.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261220299|ref|ZP_05934580.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313468|ref|ZP_05952665.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261750180|ref|ZP_05993889.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261753452|ref|ZP_05997161.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261756621|ref|ZP_06000330.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265985549|ref|ZP_06098284.1| conserved hypothetical protein [Brucella sp. 83/13] gi|265986704|ref|ZP_06099261.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996354|ref|ZP_06108911.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|294853728|ref|ZP_06794400.1| hypothetical protein BAZG_02708 [Brucella sp. NVSL 07-0026] gi|260154902|gb|EEW89983.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260918883|gb|EEX85536.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261302494|gb|EEY05991.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736605|gb|EEY24601.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261739933|gb|EEY27859.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261743205|gb|EEY31131.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262550651|gb|EEZ06812.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264658901|gb|EEZ29162.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|264664141|gb|EEZ34402.1| conserved hypothetical protein [Brucella sp. 83/13] gi|294819383|gb|EFG36383.1| hypothetical protein BAZG_02708 [Brucella sp. NVSL 07-0026] Length = 354 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 120 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 238 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LV Sbjct: 239 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLV 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 350 >gi|167578405|ref|ZP_02371279.1| hypothetical protein BthaT_09713 [Burkholderia thailandensis TXDOH] gi|167616545|ref|ZP_02385176.1| hypothetical protein BthaB_09603 [Burkholderia thailandensis Bt4] Length = 356 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T ++ L +VP+ Sbjct: 35 WVIRDFIPAIAWAGVVAIALWPALRRIDALPAFHGRATLVAAALTAAIALLVVVPVAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +EL+ + Q GIPVP LS +P G AS W HL+ P + + + Sbjct: 95 VEAIEQSRELLGWLHRVEQTGIPVPDALSHLPFGSQQASAWWQAHLAQP----LHPASAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + + FM++ LF +R G +S L + F Sbjct: 151 KGVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGALLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ Sbjct: 211 ALLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|74318619|ref|YP_316359.1| hypothetical protein Tbd_2601 [Thiobacillus denitrificans ATCC 25259] gi|74058114|gb|AAZ98554.1| membrane protein, putative [Thiobacillus denitrificans ATCC 25259] Length = 352 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 93/348 (26%), Positives = 179/348 (51%), Gaps = 6/348 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + ++FI ++ + L F A + A I+ + +WP+Y + T A++ Sbjct: 9 LARRAVAFAFLVFIFGLTFWVLSPFLAALAWAGILAYATWPLYQRLSRRLAGRDTLCALL 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWT 124 T++V+ + ++P++++ ++ +++ L G+P +P + PGG W + + Sbjct: 69 MTIAVVTMLLLPMIWVTSMLAGDVSAASAQLRLVATEGLPPLPPGVRSWPGGDWLAAQYA 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + P ++ + L + A G + L + ALFF +R G S+ Sbjct: 129 RIQADPAWVRAQIDA-LGLTDAQRLKAVAGGVGRNVAKFAL----AVFALFFLFRHGASL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q+ + + V +R+ G+ + A+ +G + YW+AGV + V Sbjct: 184 LSQVRRVATRWLGGAARGYIHAVGVTVRAVVFGIVLTALAQGALAALGYWVAGVAAPVLW 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GVITA++A+IP P+ + +S+ LL +G A LFLWGA+ + VD +RP ++ GP Sbjct: 244 GVITALVALIPFVGPVVWIGLSLSLLAQGESQAALGLFLWGALVVSWVDNLIRPLVISGP 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++PFL F G++GG++ GL+GLF+GP L+A+ IW+E ++ ++ + Sbjct: 304 TRIPFLLVFLGVLGGLQAFGLIGLFLGPALLAISVAIWREWLVRVESS 351 >gi|62317671|ref|YP_223524.1| hypothetical protein BruAb2_0762 [Brucella abortus bv. 1 str. 9-941] gi|83269654|ref|YP_418945.1| hypothetical protein BAB2_0776 [Brucella melitensis biovar Abortus 2308] gi|225686264|ref|YP_002734236.1| hypothetical protein BMEA_B0439 [Brucella melitensis ATCC 23457] gi|254691168|ref|ZP_05154422.1| hypothetical protein Babob68_13648 [Brucella abortus bv. 6 str. 870] gi|254695528|ref|ZP_05157356.1| hypothetical protein Babob3T_12990 [Brucella abortus bv. 3 str. Tulya] gi|254698951|ref|ZP_05160779.1| hypothetical protein Babob28_14959 [Brucella abortus bv. 2 str. 86/8/59] gi|254732398|ref|ZP_05190976.1| hypothetical protein Babob42_14739 [Brucella abortus bv. 4 str. 292] gi|256111637|ref|ZP_05452627.1| hypothetical protein Bmelb3E_03218 [Brucella melitensis bv. 3 str. Ether] gi|256256354|ref|ZP_05461890.1| hypothetical protein Babob9C_03093 [Brucella abortus bv. 9 str. C68] gi|261215918|ref|ZP_05930199.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|62197864|gb|AAX76163.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82939928|emb|CAJ12942.1| Protein of unknown function UPF0118 [Brucella melitensis biovar Abortus 2308] gi|225642369|gb|ACO02282.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260917525|gb|EEX84386.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|326410623|gb|ADZ67687.1| conserved hypothetical protein [Brucella melitensis M28] Length = 352 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 5/351 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELW 123 ++ + +CL I+P+L +F + E L ++ + R ++ +P E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALPES--LEEWL 118 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + G FG L + + M+ LFF +RDG Sbjct: 119 KRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGAD 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 179 VGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALL 237 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 238 WGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVG 297 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 298 KGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|322833507|ref|YP_004213534.1| hypothetical protein Rahaq_2804 [Rahnella sp. Y9602] gi|321168708|gb|ADW74407.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 365 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 6/348 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I + + S++ ++ F + A ++ +WP+ +I T+ ++ L Sbjct: 18 LFIALMTVASIWIVQPFILGFVWAGMVVIATWPLMIKLQRLLWGRRFLAVIIMTLLLILL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + LV + +P +WL+ IP G W ++ + Sbjct: 78 FVLPIALLVSSAVENGAPLVEIASHPSSLHMPDFQWLNAIPLVGNKLYNGWHALINGGGN 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A G + L ++F + Y G +++ + Sbjct: 138 ALMSKVQPYVGQTAAWFVTQAGHLGRFIVHCALMLLFSAL----LYSRGENVAMGIRHFA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + AI + ++ G +AG+P L V+ + Sbjct: 194 VRLAAERGDAAVILAGQAIRAVALGVVVTAIVQSVLGGIGLAIAGIPYATVLTVVMFVCC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W + +D LRP L+ LP L Sbjct: 254 VAQIGPLLVLIPAIIWLYWSGDNTWGTVLLVWSC-VVGSLDNVLRPVLIRMGADLPMLLI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 313 LSGVIGGLFAFGMIGLFIGPVVLAVSYRLISLWVNEAPEPDMEPEEAL 360 >gi|262043269|ref|ZP_06016400.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039368|gb|EEW40508.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 341 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 5/315 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ +L A I+ P+ + ++ E + A++ V + + PL + E+ Sbjct: 2 YSAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTIVIICLIVFTPLAIILSSLAYELN 61 Query: 91 ELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + SK+ + Q V + +PG WA H + G ++ Sbjct: 62 LVYSKLQHNDTQFPTVVASLFAHLPG--WARSFLADHNLDSAQQIQQQLSDAALKGGQYL 119 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A G + +S M+ LFF +DG + + L + + Sbjct: 120 AGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLILE-SLPLSSYVKQHLFAKFAA 178 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 V R+T G +A+ +G + G A+W+AG+ + G + A +++IP G+ I + +IY Sbjct: 179 VARATVKGTVAVALAQGALGGFAFWIAGLDGSILWGALMAFLSLIPAVGSAIIWVPAAIY 238 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G ++ + + I + +VD LRP LVG ++P +GG+ G+ G Sbjct: 239 LFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTRMPDYLILIATLGGMEIYGINGF 298 Query: 329 FIGPVLMALIAVIWK 343 IGP++ AL W Sbjct: 299 VIGPLIAALFIACWN 313 >gi|167565423|ref|ZP_02358339.1| hypothetical protein BoklE_22909 [Burkholderia oklahomensis EO147] Length = 356 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T +V L +VP+ Sbjct: 35 WVIRDFIPAIAWACVVAIALWPALRRIDAHPGFHGRATLVAAALTTAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL+ + A Q GIP P L+ +P G AS W +L+ P + E + Sbjct: 95 VEAVDQSHELLGWLHRAEQTGIPAPDALAHLPFGSQQASAWWHAYLAKP----LHPEAAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + FM++ LF ++ G +S L + F Sbjct: 151 KGVDGGAVVTFGRHFGSRIAHAAVLFGFMLVTLFVIFQAGPRLSGALLTGVRRAFGDNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ Sbjct: 211 ALLQRMAAAVYGTVTGLVVVGFGEGVLLGVAYAFAGLPHAALLGLVTAIAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +G + +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGAVGWAIGLAAFGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLFIGP LM ++ V+W E + Sbjct: 331 TFGLLGLFIGPALMTVLTVLWVEWV 355 >gi|257143048|ref|ZP_05591310.1| hypothetical protein BthaA_28058 [Burkholderia thailandensis E264] Length = 356 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 163/325 (50%), Gaps = 7/325 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T ++ L +VP+ Sbjct: 35 WVIRDFIPAIAWAGVVAIALWPALRRIDALPAFHGRATLVAAALTAAIALLVVVPVAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + +EL+ + Q GIP+P LS +P G AS W HL+ P + + + Sbjct: 95 VEAIEQSRELLGWLHRVEQTGIPMPDALSHLPFGSQQASAWWQAHLAQP----LHPASAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG + + FM++ LF +R G +S L + F Sbjct: 151 KGVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGALLTGVRRAFGDSGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ Sbjct: 211 ALLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG Sbjct: 271 FCGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAE 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESI 346 T GLLGLF+GP LM ++ V+W E + Sbjct: 331 TFGLLGLFVGPALMTVLTVLWAEWV 355 >gi|309780687|ref|ZP_07675428.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|308920369|gb|EFP66025.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 349 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 142/351 (40%), Gaps = 5/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ Q ++ + L + L FF V +I+ P+ + +++ + Sbjct: 2 DSGNGHQKFFFLLLFVVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRPNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASE 121 A+ ++ + I+P++F+ + E+ ++ A + + + +P W + Sbjct: 62 ALATLTLIILIVILPVIFVTATIVQEIGVAYQQIQGAQPNYSRYLSEAVQALP--TWVQQ 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L K + F A G + + M+ +FF RDG Sbjct: 120 LLAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ + + + + V+R+T G +A+ +G++ G +W G+ Sbjct: 180 TDIGRRVRRALP-MDEEHKRLLLNKFTTVVRATVKGNIAVALVQGVLGGLIFWFLGIDGV 238 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G + A ++++P GA + + V++Y L+ G I+ L + + +VD LRP L Sbjct: 239 VLWGALMAFLSLLPAIGASLVWIPVALYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 VG K+P +GG+ G+ G IGP++ AL W E Sbjct: 299 VGKDTKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASWDIFAREQSE 349 >gi|310767540|gb|ADP12490.1| putative inner membrane protein [Erwinia sp. Ejp617] Length = 374 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 132/352 (37%), Gaps = 7/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ + + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMINIQRLLWGRRALAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T+ ++ +FI+P+ L + +++ + +P WL P G + Sbjct: 70 MTLLLILVFIIPVALLVNSLVENSAPMIAWLGSG-HLQMPDLHWLRSTPLVGRKLYSAYH 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ S + F A FG + L ++F ++ Y G + Sbjct: 129 NLIAGGGSALLAQVQPYIGRTTGFFFAQAGHFGRFMMHLGLMLLFSVL----LYWRGEQV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + IR+ LG+ + A+ +G++ G ++G+P L Sbjct: 185 GLGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAVSGIPFATIL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + ++ G I I+L G+ T L +W + +D LRP L+ Sbjct: 245 TVLMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSC-VVGTLDNVLRPMLIRMG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 304 ADLPMILILSGVIGGLVAFGMIGLFIGPVVLAISYRLVSVWVHETPAPHENP 355 >gi|17989151|ref|NP_541784.1| putative transmembrane protein [Brucella melitensis bv. 1 str. 16M] gi|256043359|ref|ZP_05446292.1| hypothetical protein Bmelb1R_02664 [Brucella melitensis bv. 1 str. Rev.1] gi|17985002|gb|AAL54048.1| putative transmembrane protein [Brucella melitensis bv. 1 str. 16M] Length = 352 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 5/351 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELW 123 ++ + +CL I+P+L +F + E L ++ + R ++ +P E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALPES--LEEWL 118 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + G FG L + + M+ LFF +RDG Sbjct: 119 KRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGAD 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 179 VGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGITFWLLGIEAALL 237 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 238 WGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVG 297 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 298 KGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|226943233|ref|YP_002798306.1| hypothetical protein Avin_11000 [Azotobacter vinelandii DJ] gi|226718160|gb|ACO77331.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 346 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 141/342 (41%), Gaps = 6/342 (1%) Query: 5 MLNPQGIMRWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M+NP+ R + ++L+S+ + + F+ + A ++ P+ Sbjct: 1 MINPRFEYRVFLFLLVLISVAFVWIILPFYGAIFWAAVLAILFHPLQIRLQRHLGNHPNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ + + + ++P+ + + E L +++ + L ++ Sbjct: 61 SALLTLIVCVVVAVLPITIVSMLLIQEGATLYNEIEAGRIDFAGMLEGLKAQLPEPLQAQ 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L L+ + G + A G + L M+ LFFF RDG Sbjct: 121 MSRFGLDSRYDLRDRIAN-IAMQGSQLLATKAFNIGQNTFQFILGFFVMLYLLFFFLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ ++ L ++ + + ++++T G ++A+ +G + G + L G+P Sbjct: 180 TALVARIRE-AIPLSEMKKSRLFQRITGMVQATIKGSLVVAVIQGSLGGVIFALLGIPRA 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + GV A ++ +P G + + V+IY L+ G I + L G + +VD +RP L Sbjct: 239 LLWGVAMAFLSFLPALGTGLVWAPVAIYFLLSGAILKSVLLTACGIFIIGLVDNIVRPIL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 V +LP +GG+ GL G IGPV+ AL W Sbjct: 299 VSKDTRLPDYLVLVSTLGGLALFGLNGFVIGPVIAALFVSTW 340 >gi|188533959|ref|YP_001907756.1| putative inner membrane protein [Erwinia tasmaniensis Et1/99] gi|188029001|emb|CAO96869.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] Length = 374 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 135/350 (38%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ F + + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMIKFQRLLWGKRSLAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T+ ++ +FI+P+ L + L++ + +P +W+ IP G + Sbjct: 70 MTLLLILVFIIPVALLVNSLIENSGPLIAWLGSG-HLQMPELQWMRSIPLVGRKLYSAYH 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + F A FG + L ++F ++ Y G + Sbjct: 129 NLVAGGGTALLAQVQPYIGRTTGFFFAQAGHFGRFMMHLGLMLLFSVL----LYWRGEQV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q + L + + IR+ LG+ + A+ + ++ G ++G+P L Sbjct: 185 GQGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAISGIPFATIL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + ++ G + I+L G+ T L +W + +D LRP L+ Sbjct: 245 TVLMILSCLVQLGPLVVLVPAIIWLYWSGDTTWGTVLLVWSC-VVGTLDNVLRPVLIRMG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 304 ADLPMILILSGVIGGLIAFGMIGLFIGPVVLAISYRLVSVWVHEAPAPHE 353 >gi|259908561|ref|YP_002648917.1| putative inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224964183|emb|CAX55690.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283478527|emb|CAY74443.1| UPF0118 inner membrane protein ydiK [Erwinia pyrifoliae DSM 12163] Length = 374 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 132/352 (37%), Gaps = 7/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ + + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMINIQRLLWGRRALAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 T+ ++ +FI+P+ L + +++ + +P WL P G + Sbjct: 70 MTLLLILVFIIPVALLVNSLIENSAPMIAWLGSG-HLQMPDLHWLRSTPLVGRKLYSAYH 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ S + F A FG + L ++F ++ Y G + Sbjct: 129 NLIAGGGSALLAQVQPYIGRTTGFFFAQAGHFGRFMMHLGLMLLFSVL----LYWRGEQV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + IR+ LG+ + A+ +G++ G ++G+P L Sbjct: 185 GLGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAVSGIPFATIL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + ++ G I I+L G+ T L +W + +D LRP L+ Sbjct: 245 TVLMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSC-VVGTLDNVLRPMLIRMG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 304 ADLPMILILSGVIGGLVAFGMIGLFIGPVVLAISYRLVSVWVHETPAPHENP 355 >gi|187923378|ref|YP_001895020.1| hypothetical protein Bphyt_1381 [Burkholderia phytofirmans PsJN] gi|187714572|gb|ACD15796.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 371 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 152/360 (42%), Gaps = 7/360 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A + + ++ + + P ++ + + E+V+ V + G+P +P W++ IP G Sbjct: 61 GAATLIVLIILIVVLGPFVYAGFAFGAHVHEIVALVQRLFEAGLPDLPPWVARIPLVGSN 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + S L T G + + + I+ FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAAIA-----VTHGLGLLALSIVLAFFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + L++ + + + ++ G+ A+ +G++ G W+AGV Sbjct: 176 TGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 236 PAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLAVGMSDNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+G +P + G++GG G LG+FIGP L+A+ + + + + + Sbjct: 296 ILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPAARALVPD 355 >gi|146306684|ref|YP_001187149.1| hypothetical protein Pmen_1653 [Pseudomonas mendocina ymp] gi|145574885|gb|ABP84417.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 362 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 76/345 (22%), Positives = 158/345 (45%), Gaps = 8/345 (2%) Query: 4 TMLNPQGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 TM +P + I+ + LV+ + L F+ V A+++ P+ + Sbjct: 8 TMPSPSVEHKAFILLLALVTIAFFWILLPFYGAVFWAIVLAVVFAPLQQRLARRFGGRGN 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A++ + + + I+P++F+ + E L ++ G V + +P M Sbjct: 68 LSALLTLIVCLLVAILPVIFVISAVVAEGTSLYQRLESGELDIGAYVTNTIEMLPPFMQ- 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +L +S+ + L+ G ++ G + ++ + M+ LFF R Sbjct: 127 DQLHRFGMSNLEGLREQISK-GAMAGSQYLATKVFVIGQMTFEFLIGFFIMLYLLFFLLR 185 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG ++++ + + L +++ +V+R+T G ++A +G + G W+ G+P Sbjct: 186 DGRTLARDVRTAVP-LGDTTKRRLQIKFTRVVRATVKGNIVVAAVQGALGGLILWVLGLP 244 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 S + G + A ++++P GA + + ++ YLL+ G+++ L ++G + + +VD LRP Sbjct: 245 SPLLWGALMAFLSLLPAVGAGLVWAPMAAYLLLSGSVWQGVTLSVFGVLVISLVDNILRP 304 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG ++P +GG+ +GL G IGP++ AL W Sbjct: 305 ILVGKDTRMPDYLILTSTLGGLALLGLNGFVIGPLVAALFVASWN 349 >gi|54293714|ref|YP_126129.1| hypothetical protein lpl0767 [Legionella pneumophila str. Lens] gi|53753546|emb|CAH15001.1| hypothetical protein lpl0767 [Legionella pneumophila str. Lens] Length = 350 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 174/338 (51%), Gaps = 3/338 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + I++ SLY + F ++ A II ++P+Y+ + A + T Sbjct: 6 KELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + LF++PL +L + E + ++ + N+ G P + +IP G + W + Sbjct: 66 TLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVN 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + P S+K T + + G+ + F ++ LFFFYRDG + Sbjct: 126 IGKPGSIKEFLSNLHVTLTPT--SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLL 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G Sbjct: 184 QIQHIGEYCLGDRWFRYSDKLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGF 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ITA+ AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+ Sbjct: 244 ITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQ 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LPFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 304 LPFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|148360616|ref|YP_001251823.1| transmembrane permease [Legionella pneumophila str. Corby] gi|148282389|gb|ABQ56477.1| transmembrane permease [Legionella pneumophila str. Corby] gi|307609525|emb|CBW99023.1| hypothetical protein LPW_08081 [Legionella pneumophila 130b] Length = 350 Score = 208 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 174/338 (51%), Gaps = 3/338 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + I++ SLY + F ++ A II ++P+Y+ + A + T Sbjct: 6 KELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + LF++PL +L + E + ++ + N+ G P + +IP G + W + Sbjct: 66 TLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVN 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + P S+K T + + G+ + F ++ LFFFYRDG + Sbjct: 126 IGKPGSIKEFLSNLHVTLTPT--SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLL 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G Sbjct: 184 QIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGF 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ITA+ AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+ Sbjct: 244 ITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQ 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LPFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 304 LPFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|186476728|ref|YP_001858198.1| hypothetical protein Bphy_1973 [Burkholderia phymatum STM815] gi|184193187|gb|ACC71152.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 382 Score = 208 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 141/333 (42%), Gaps = 7/333 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F +L I+ F+SW +Y + + A + + ++ + + P ++ + Sbjct: 37 APFTTALLWGAILSFSSWGLYCKLATSLGGRRRWAATLIVLIILIVVLGPFVYAGFALGA 96 Query: 88 EMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ + V G+P +P W++ IP G W + S + G Sbjct: 97 HTRDITALVQHLMDAGLPDLPDWVARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAG 156 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II FFFY G + L++ + + Sbjct: 157 KWILAAALA-----VTHGLGLLALSIILTFFFYTGGEGAAAWLNAGMRRIAGERADYLLA 211 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ G+ A+ +G++ G W+AGVP+ LG+ T +++IPGG + + Sbjct: 212 LAGSTVKGVVYGILGTALVQGVLAGFGCWIAGVPAPALLGLATFFLSVIPGGPVVVWLPA 271 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I+L G A L +WG + + + D ++P L+G +P + G++GG G Sbjct: 272 AIWLYHGGETGWAIFLVVWGVVVVGMSDNVVKPILIGKSSDMPLILVMLGILGGAFAFGF 331 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LG+FIGP L+A+ + + + E +E I+ Sbjct: 332 LGVFIGPTLLAVAYTVLHDWTIGSPEARELIAK 364 >gi|330502637|ref|YP_004379506.1| hypothetical protein MDS_1723 [Pseudomonas mendocina NK-01] gi|328916923|gb|AEB57754.1| hypothetical protein MDS_1723 [Pseudomonas mendocina NK-01] Length = 353 Score = 208 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 151/344 (43%), Gaps = 5/344 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F+ V A+++ P+ I + S A++ ++ Sbjct: 8 QKAFILLLVLVTIAFFWILLPFYGAVFWAMVLAVVFAPLQERLIRRTGGRSNLAALLTSI 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHL 127 + + I+P++F+ + E L K+ G V ++ +P + Sbjct: 68 ICLLVAILPVIFITSSVVAEGASLYQKLESGELDIGTYVTSFIQMLPPSIQEQLDRLGMS 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +S+ + G ++ G ++ + M+ LFF RDG + + Sbjct: 128 DLDGLREQVSKGAM--AGSQYLATKVFAIGQGTFEFFIGFFVMLYLLFFLLRDGKELVHK 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + L +++ +V+R+T G ++A +G + G +W G+ S + GV+ Sbjct: 186 IRTTIP-LADTTKRRLQIKFTRVVRATVKGNVVVAAVQGALGGFIFWALGIYSPLLWGVL 244 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P GA I + V++YL++ G++ L +G + + +VD LRP LVG + Sbjct: 245 MAFLSLLPAAGAGIVWAPVAVYLMLSGSLVQGIILTAFGVLVIGLVDNILRPILVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P +GG+ +GL G IGP++ AL W K Sbjct: 305 MPDYLILISTLGGLSLLGLNGFVIGPLVAALFVASWNLFGAKKK 348 >gi|260544905|ref|ZP_05820726.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260756769|ref|ZP_05869117.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260760200|ref|ZP_05872548.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260763438|ref|ZP_05875770.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882585|ref|ZP_05894199.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|265993113|ref|ZP_06105670.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|265999137|ref|ZP_05465132.2| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|297249715|ref|ZP_06933416.1| hypothetical protein BAYG_02478 [Brucella abortus bv. 5 str. B3196] gi|260098176|gb|EEW82050.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260670518|gb|EEX57458.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673859|gb|EEX60680.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676877|gb|EEX63698.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872113|gb|EEX79182.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|262763983|gb|EEZ10015.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263092386|gb|EEZ16639.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|297173584|gb|EFH32948.1| hypothetical protein BAYG_02478 [Brucella abortus bv. 5 str. B3196] gi|326553915|gb|ADZ88554.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 354 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 5/351 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELW 123 ++ + +CL I+P+L +F + E L ++ + R ++ +P E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALPES--LEEWL 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + G FG L + + M+ LFF +RDG Sbjct: 121 KRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGAD 180 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 181 VGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALL 239 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 240 WGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVG 299 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 300 KGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 350 >gi|330503226|ref|YP_004380095.1| hypothetical protein MDS_2312 [Pseudomonas mendocina NK-01] gi|328917512|gb|AEB58343.1| hypothetical protein MDS_2312 [Pseudomonas mendocina NK-01] Length = 361 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 8/334 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F++ + A ++ F SWP+ + A I T + + VPL++L + Sbjct: 22 WVLAPFWSALFWAAVLAFASWPLMRLLTQLLNGRLSLAAGILTGVWVVMVAVPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPVPR-WLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +K+ + V G+P P WL IP G ELW + +L Sbjct: 82 LADHIKDANALVRDLQVEGLPPPPSWLGSIPLVGDRLVELWRTIDQQGAAFFDTLRPYLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A + G ++ LS ++ +FFFYRDG ++ + SL E L Sbjct: 142 QVGNWLVARSA-KIGAGMVELALS----LVLVFFFYRDGPRLAVFVHSLLERLIGERADH 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A + ++ + +AGVP + LG++T + I P+ + Sbjct: 197 YLELVAGTVQRVVNGVIGTAAAQAVLAYIGFVIAGVPGALVLGLLTFAFSFI-MIPPLIW 255 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +L+ +G I A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 256 GPAVAWLVWQGEIGMAIFLGVWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGILA 315 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G +GLF+GP L+A+ + + + E + Sbjct: 316 FGFMGLFLGPTLLAVAYSLLSDWVANKTPPVETV 349 >gi|154243797|ref|YP_001409370.1| hypothetical protein Xaut_4931 [Xanthobacter autotrophicus Py2] gi|154162919|gb|ABS70134.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 351 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 137/336 (40%), Gaps = 3/336 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + L+ L ++ +L A+I+ P+ A ++ Sbjct: 7 QEFAFLATLVLVTVAFLWLLSPYYGAILWAVILAILFDPLQRGLERWLGGRRNLAAALSV 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ +C+ ++P + E L +++ + L + L L Sbjct: 67 LACICVVVIPGTLILAALANEAASLYTRIGTREFDPGTMLAQLQGVLPSFVWRALAALDL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L+ +FL + A G + +S+ M+ LFF +RDG +++ Sbjct: 127 GDMAQLQTRLTSFLLE-FSQTLANRAIIIGQNTAQFVISLGVMLYLLFFLFRDGVALAAS 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L ++ V+++T G IA +G + G + + G+ + + GV+ Sbjct: 186 IRKASP-LGAHETDQLLEKFTSVVKATVKGNVTIAAIQGAIGGVTFGMLGIQAALLWGVL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++P GA + + + YLL+ G L G + + VD LRP LVG Sbjct: 245 MAVLSLLPAVGAGLVWVPAAAYLLLTGAYLKGAILLAIGTLVISTVDNVLRPALVGKGTM 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP VGG+ +G+ G +GP+++AL W Sbjct: 305 LPDYAVLISTVGGLSLIGMNGFVLGPLIVALFVAAW 340 >gi|307320954|ref|ZP_07600362.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306893438|gb|EFN24216.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] Length = 371 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 7/341 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L F + +L A +I F++WP Y F A TV V+ + + PL Sbjct: 22 IGCTLVLWPFLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLAL 81 Query: 81 LFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSE 138 L + LV+ V + G P P W+ ++P G + W + + I + Sbjct: 82 LATTLADNISSLVAGVTHVLEQGPPAPPDWVRELPIAGEGLATYWEGLAHNAPAFTIELK 141 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + A G +F L + I FF + G ++ + E + A Sbjct: 142 KVIGP-----FADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGA 196 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ +V + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G Sbjct: 197 RARRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGP 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + V+++L ++ +++ + +WG + + +D LRP+L+G LP L FGL+G Sbjct: 257 PFVWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GV GL+GLF+GP L+A+ +++E I A E + + S+ Sbjct: 317 GVLAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSS 357 >gi|307730302|ref|YP_003907526.1| hypothetical protein BC1003_2282 [Burkholderia sp. CCGE1003] gi|307584837|gb|ADN58235.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 371 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 150/355 (42%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAAVGGRRR 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 + A + ++ + + P ++ + + ++++ V + G+P +P W++ IP G Sbjct: 61 WAATLMVFVILIVVLGPFVYAGFAFGAHVHDIIALVQRLFEAGLPDLPPWVARIPVVGSS 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W S L T G + + + I+ FFFY Sbjct: 121 IQSFWETATSSNSELIAQLRTLAAPAGKWIL-----SAAIAVTHGLGLLALSIVLAFFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G L++ + + + ++ G+ A+ +G++ G W+AGV Sbjct: 176 TGGEGAGAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG+ T +++IPGG I + +I+L G A L +WG + + + D ++P Sbjct: 236 PAPALLGLATFFLSVIPGGPVIVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G +P + G++GG G LG+FIGP L+A+ + + + ++ Sbjct: 296 ILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPASR 350 >gi|242239096|ref|YP_002987277.1| inner membrane protein [Dickeya dadantii Ech703] gi|242131153|gb|ACS85455.1| protein of unknown function UPF0118 [Dickeya dadantii Ech703] Length = 364 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 132/340 (38%), Gaps = 6/340 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ S ++ TV ++ Sbjct: 19 LFIGILIIACFWVVQPFILGFAWASMVVIATWPLLIKLQSMLWGYRFLAVIVMTVLLVLF 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P L + L++ + P WL IP G W + + Sbjct: 79 FVIPTSILVSSVIDNTSTLIAWAGSQERITPPSLDWLRSIPMFGEKLHSSWYGLVHSGGA 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F I+ Y G ++ + Sbjct: 139 AVMAKVQPYVGQAASWAVAQAAHIGRFLMHCALMVLFSIL----LYSKGDQVALGVRRFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + + IR+ LG+ + AI + L+ G L+G+P L V+ + Sbjct: 195 MRLGKQGGEAAVILAAQSIRAVALGVVVTAIVQSLLGGIGLALSGIPYTTLLTVLMFLSC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ T L +W I + +D +RP L+ LP L Sbjct: 255 VAQLGPLMVLVPAIIWLYWTGDTTWGTILLVWSCI-VGTLDNVIRPLLIRMGADLPMLLI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPV++A+ + + E+ Sbjct: 314 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKDTPES 353 >gi|260564563|ref|ZP_05835048.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989779|ref|ZP_06102336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|260152206|gb|EEW87299.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|263000448|gb|EEZ13138.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 354 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 5/351 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELW 123 ++ + +CL I+P+L +F + E L ++ + R ++ +P E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALPES--LEEWL 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + G FG L + + M+ LFF +RDG Sbjct: 121 KRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGAD 180 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 181 VGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGITFWLLGIEAALL 239 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 240 WGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVG 299 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 300 KGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 350 >gi|294636262|ref|ZP_06714670.1| putative membrane protein [Edwardsiella tarda ATCC 23685] gi|291090449|gb|EFE23010.1| putative membrane protein [Edwardsiella tarda ATCC 23685] Length = 368 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 131/339 (38%), Gaps = 6/339 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +++ L+ ++ F A ++ +WP+ ++ T+ ++ L Sbjct: 21 LFIALLLISCLWVVQPFILGFTWASMVVIATWPVLVWLQRHLWGKRWLAVLLMTLLLLLL 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + ++ A +P WL +P L +L Sbjct: 81 FVIPIGMVIASLITNAGPILDWAANARNWQMPQLEWLQTLPLVGEKLYASWHGLMSEGAL 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ F+ A+ G FL L ++F + Y G ++ + Sbjct: 141 MAKIQPYIGQAITWFV-TQAAHVGGFFLHCSLMLLFSAL----LYSRGEDVALGIRHFAI 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + L+ G ++G+ V L V+ + + Sbjct: 196 RLAAERGDAAVILGGQAIRAVALGVVVTALAQSLLAGIGLAVSGIHYAVLLTVVMFVCCL 255 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + +L G+ T L +W + +D LRP L+ LP L Sbjct: 256 AQLGPLLVLLPAVGWLYWSGDTTWGTLLLVWSG-VVGTMDNVLRPALIRMGADLPMLLVL 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPV++A+ + + Sbjct: 315 SGVIGGLLAFGMIGLFIGPVVLAVSYRLVSAWVNEAPPP 353 >gi|161521467|ref|YP_001584894.1| hypothetical protein Bmul_4931 [Burkholderia multivorans ATCC 17616] gi|160345517|gb|ABX18602.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] Length = 353 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 142/347 (40%), Gaps = 5/347 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + + L FF V I+ P+ ++ + A++ Sbjct: 9 DHQKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLT 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 69 LTLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYG 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P K L++ + G + +S M+ +FF RDG I Sbjct: 129 LTNIPGIQKKLTDGAAAISQFAAAQAL--SIGQNTFQFIVSFGVMLYMVFFLLRDGGEIG 186 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G++ G +W+ G+ V G Sbjct: 187 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWG 245 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L G ++ L + + +VD LRP LVG Sbjct: 246 ALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKD 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 K+P +GG+ G+ G IGP++ AL W A +E Sbjct: 306 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQE 352 >gi|16262687|ref|NP_435480.1| hypothetical protein SMa0447 [Sinorhizobium meliloti 1021] gi|14523310|gb|AAK64892.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 373 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 7/341 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L F + +L A +I F++WP Y F A TV V+ + + PL Sbjct: 24 IGCTLVLWPFLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLAL 83 Query: 81 LFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSE 138 L + LV+ V + G P P W+ +P G + W + + I + Sbjct: 84 LATTLADNISSLVAGVTHVLEQGPPAPPDWVRGLPIAGEGLATYWEGLAHNAPAFTIELK 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + A G +F L + I FF + G ++ + E + A Sbjct: 144 KVIGP-----FADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGA 198 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ +V + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G Sbjct: 199 RARRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGP 258 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + V+++L ++ +++ + +WG + + +D LRP+L+G LP L FGL+G Sbjct: 259 PFVWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GV GL+GLF+GP L+A+ +++E I A E + + S+ Sbjct: 319 GVLAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSS 359 >gi|120555336|ref|YP_959687.1| hypothetical protein Maqu_2425 [Marinobacter aquaeolei VT8] gi|120325185|gb|ABM19500.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 363 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 144/351 (41%), Gaps = 5/351 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 M++ + L + +K FF P+ A+ I P+ + + + T A+I Sbjct: 8 RTFLAMLLGVSLAFILLMKPFFGPIFWAVAIALIFHPVQQLLVRRLGDRPTLNALITLFV 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + ++P+L L + E + K+ I ++ + A + + Sbjct: 68 CMVIVVIPVLVLGAALIAEGMGIYQKIQAGE---IRPGEYIDQVNQSFPAIQAFLAQFDI 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G F+ + A G + L + M+ FF RDG + + + Sbjct: 125 NFADLRDRAVNAFLGGSQFLAKQALGIGQNTFQFFLGLALMVYLAFFLIRDGQKLIELMI 184 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + +V R+T G +IAI +G + G +W+ G+ + GV+ A Sbjct: 185 RALP-LGDERERLLFAKFAEVTRATVKGNLLIAIIQGALGGMIFWILGITGALLWGVVMA 243 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I++++P GA I + +IYL G+I A L +G + + + D LRP LVG K+P Sbjct: 244 IVSLLPAVGAAIVWVPAAIYLAAVGDIVPAIILTAYGVVVIGLADNLLRPVLVGRDTKMP 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ G+ G +GP++ AL W I + +N Sbjct: 304 DYLVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFGQYHYADPAN 354 >gi|189352364|ref|YP_001947991.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221210990|ref|ZP_03583970.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gi|189336386|dbj|BAG45455.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221169946|gb|EEE02413.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 350 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 142/347 (40%), Gaps = 5/347 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + + L FF V I+ P+ ++ + A++ Sbjct: 6 DHQKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 66 LTLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYG 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P K L++ + G + +S M+ +FF RDG I Sbjct: 126 LTNIPGIQKKLTDGAAAISQFAAAQAL--SIGQNTFQFIVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G++ G +W+ G+ V G Sbjct: 184 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L G ++ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 K+P +GG+ G+ G IGP++ AL W A +E Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQE 349 >gi|329908669|ref|ZP_08274912.1| hypothetical protein IMCC9480_3662 [Oxalobacteraceae bacterium IMCC9480] gi|327546658|gb|EGF31619.1| hypothetical protein IMCC9480_3662 [Oxalobacteraceae bacterium IMCC9480] Length = 352 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 142/337 (42%), Gaps = 5/337 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q +++ + L + L F V A ++ P++ +++ + T A+ Sbjct: 7 HQKFFLFLLAAVTLAFGWILLPFIGAVFWAAVLALLFAPLHRRLLNRFGQRHTLSALATL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKH 126 + V+ + I+PL + E + K+ + G + L+ +P W + Sbjct: 67 MVVLFIVILPLTLIGVSLAQEGTLVYHKIRTGSLDFGTYFQQILAALP--QWLVTQLQRV 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G I D+ + M+ LFF RDG ++S Sbjct: 125 GMADFTELQDKVSQVIRQGSQTIASQVLNITQNTFDFVIGFGMMLYLLFFLLRDGAALSA 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L K++ VIR+T G ++A +G + G +W G+ + GV Sbjct: 185 RIRHAIP-LEREQKKQLVAKFATVIRATVKGNIVVAASQGTLGGLMFWFLGIQGALLWGV 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A+++++P GA + + V+IY L+ G I+ L +G + + +VD LRP LVG Sbjct: 244 LMAVLSLLPAIGAALIWGPVAIYFLLTGAIWQGVTLIAFGVLVIGLVDNILRPVLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++P +GG+ GL G +GP + A+ W Sbjct: 304 QMPDYVVLISTIGGISVFGLSGFVVGPSIAAMFMAAW 340 >gi|85710071|ref|ZP_01041136.1| membrane protein, putative [Erythrobacter sp. NAP1] gi|85688781|gb|EAQ28785.1| membrane protein, putative [Erythrobacter sp. NAP1] Length = 400 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 143/348 (41%), Gaps = 3/348 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + ++ ++ F PV+ A + P+Y ++K A ++ + + Sbjct: 28 FLLILAVVSILFVWVTWPFVGPVMWAALAAIMFQPLYKWSLTKTRGRRNIAASLSLLIIF 87 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++P L++ + E +++ + + I ++ Sbjct: 88 VAVLLPALWIGSLVLDEAVGVINALQANPIDIAQTVNSIFSILPDSLQRMALENGWTNVS 147 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ E+ L + I + A G L + LS + LFF RDG I + + Sbjct: 148 VMQDRLESLLGESA-GLIAQSAVSIGSGALGFFLSFGIGLYVLFFLLRDGSRIGETILHS 206 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +++ ++R+ G ++ + +G + G LAGVPS + LGV+ AI+ Sbjct: 207 AP-IEREIADRLADRFLGIVRAVIKGSGVVGLVQGTLGGIMLALAGVPSALLLGVLMAIL 265 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+IP G + + I+L+I G ++ + G I + VD LRP LVG +P Sbjct: 266 ALIPAVGTALVWAPAGIWLIIAGEVWTGAFVLAAGTIVIASVDNVLRPILVGRDTGIPDW 325 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GG+ G G+ +GP++ L W E++E I+ Sbjct: 326 IVLVTTLGGISLAGFSGIVLGPLVAGLFLASWSILQEQRAEDEEAIAK 373 >gi|221197138|ref|ZP_03570185.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] gi|221203811|ref|ZP_03576829.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221175977|gb|EEE08406.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221183692|gb|EEE16092.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length = 350 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 142/347 (40%), Gaps = 5/347 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q +++ + + + L FF V I+ P+ ++ + A++ Sbjct: 6 DHQKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + +P + Sbjct: 66 LTLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSIQHLLAKYG 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P K L++ + G + +S M+ +FF RDG I Sbjct: 126 LTNIPGIQKKLTDGAAAISQFAAAQAL--SIGQNTFQFIVSFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G++ G +W+ G+ V G Sbjct: 184 RRVRRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWG 242 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P GA + + ++Y L G ++ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 K+P +GG+ G+ G IGP++ AL W A +E Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQE 349 >gi|145300900|ref|YP_001143741.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853672|gb|ABO91993.1| putative permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 362 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 144/357 (40%), Gaps = 6/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ L + + +I+ L+ F ++ A +I +WP+ Sbjct: 3 MKKVDLAKITLGVLFLSILIISCFMVLRPFLPALVWATMITIATWPLMRMVQRLLWGKRM 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+ T+ ++ +F++PL + L+ + P WL IP G Sbjct: 63 LAALFMTLVLLLMFVIPLFMALANVAEQAPMLIELGTTISHSPPPELLWLQQIPLVGTKL 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W + L+ + ++ A G++F+ + L++ + Y Sbjct: 123 YEFWQQILASGGQVLFTKLAPYFGQTARWLASQAGNLGLLFVHFLLTVGICGV----LYH 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + + IR+ +G+ + A+ + V G +AG+P Sbjct: 179 SGEMVATGIRRFAHRLAGERGDNATVLASQAIRAVAMGVVVTALVQSSVAGIGLLIAGIP 238 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ ++ + G A YL G+ T L +W + +D LRPF Sbjct: 239 YTMVLVVVMFLLIVAQIGPFPVLLACIGYLYWSGDTTWGTFLLVWS-LFAGTMDNILRPF 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ LP + G++GG+ TMG++GLFIGPV++A+ + + ++ + Sbjct: 298 LIKRGADLPLILILVGVIGGLLTMGIIGLFIGPVVLAVGYTLLDAWVREDEQAAAEP 354 >gi|194292237|ref|YP_002008144.1| transmembrane protein [Cupriavidus taiwanensis LMG 19424] gi|193226141|emb|CAQ72088.1| putative transmembrane protein [Cupriavidus taiwanensis LMG 19424] Length = 348 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 139/341 (40%), Gaps = 5/341 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + + ++ L F++ +L I+ P++ + A+ + + + Sbjct: 9 ILLVAVTIAFIWILLPFYSAILWGTILAILFHPMHRKLTVRFGNRENLAALATLLVCVLM 68 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 I+P+ + E ++ G + +P + + Sbjct: 69 AIIPVFLMIATLAQEAAFAYQQIRTGKWDFGQYFQTAVQALPAS--VEAWLNEMGLADVA 126 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T F+ A G L + + + M+ +FF RDG IS + Sbjct: 127 GLQAKLTEGAARISQFMAAQAVAIGQNTLQFAVGLGVMLYLVFFLLRDGAMISHRFRE-A 185 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L A+ +++ V+R+T G ++A +G++ G A+ L G+ + G + A ++ Sbjct: 186 MPLSDAHTRRLVGRFTTVVRATVKGNVVVAAVQGILGGLAFLLLGINGALLWGTLMAFLS 245 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA + + +IY L+ G + L G + + VD LRP LVG KLP Sbjct: 246 LLPAVGAALVWGPAAIYFLLAGPAWKGIALIAIGTLVIGAVDNVLRPILVGKDTKLPDWV 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GG+ G+ G IGP++ AL W S++ +++ Sbjct: 306 VLISTLGGMSVFGINGFVIGPLIAALFMSCWHMSVIEDRDD 346 >gi|91778406|ref|YP_553614.1| hypothetical protein Bxe_B1702 [Burkholderia xenovorans LB400] gi|91691066|gb|ABE34264.1| putative membrane protein [Burkholderia xenovorans LB400] Length = 360 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 92/346 (26%), Positives = 172/346 (49%), Gaps = 7/346 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFL 62 + + + + ++L++L+ ++ F A V A +I WP+ +T + Sbjct: 19 LKKQKTASLALYIGLVLLALWVVRDFIAVVAWAGVIAIALWPLLRKVEGNRWFTGRTTLI 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASE 121 A + T+ + L ++P+ + E +L ++GIP+P ++ +P G S Sbjct: 79 AAVLTLLIALLVVLPVGIGIAQALREAHDLNEWFKTVQENGIPLPDFVQHLPFGVQQIST 138 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +L+ P + +K + FG + FM++ LF ++ G Sbjct: 139 WWQANLTQP----LRESAAMKGLHSPAVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQAG 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 195 PRLSGALLKGMRRGFGDDGAQLLQRMAAAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHV 254 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +TAI AM+P AP++F +++LL +G++ A L ++GA+ +F+ + +RP L+ Sbjct: 255 ALLAFVTAIAAMLPFCAPLTFGIAALWLLSQGSVAAAIGLAVFGAVVVFVAEHFVRPVLI 314 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 315 GNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVQ 360 >gi|256059328|ref|ZP_05449530.1| hypothetical protein Bneo5_03088 [Brucella neotomae 5K33] Length = 352 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 118 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 178 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LR LV Sbjct: 237 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRLPLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 297 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 348 >gi|119387710|ref|YP_918744.1| hypothetical protein Pden_4988 [Paracoccus denitrificans PD1222] gi|119378285|gb|ABL73048.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 347 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 137/330 (41%), Gaps = 3/330 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + ++ + F+ VL A+I+ P++ A+++ ++ + + Sbjct: 13 AVVLITTVALIWVVLPFYGGVLWAVILAILFSPLHDRLEHVLGGRRNLAALLSVLACIFI 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P + + + V V + L +L + + Sbjct: 73 VVIPATLILGALARQATSVYQSVSSQEPDLAAVMDQVRGAMPSFVLDALSAMNLGSFEEI 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +F+ FI A G + + + M+ LFF +RDG + + + Sbjct: 133 QSRLVSFVGQAA-QFIASRAMVIGQGAAQFSIGLGVMLYVLFFLFRDGRGLVGSISAASP 191 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + I + V+++T G +IA +G + G +WL G+ + + GVI ++++ Sbjct: 192 -LSAPHTRHIMQKFVDVVKATVTGNVVIATIQGTIGGVTFWLVGIEAALLCGVIMGVLSL 250 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + + ++Y LI G + G + + +D LRP LVG LP Sbjct: 251 LPAVGAFLVWLPFAVYYLITGAYLKGIVIMAVGVLVISTIDNLLRPPLVGRRSSLPDYVV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +GG+ MG+ G +GP++ A +W Sbjct: 311 LVSTLGGISQMGMNGFVVGPLIAAFFIAVW 340 >gi|222111100|ref|YP_002553364.1| hypothetical protein Dtpsy_1907 [Acidovorax ebreus TPSY] gi|221730544|gb|ACM33364.1| protein of unknown function UPF0118 [Acidovorax ebreus TPSY] Length = 352 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 5/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + +++ P++ + A+ + + I+P+ + Sbjct: 21 AFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI 80 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + E + G + + L+ +P W EL + ++ T Sbjct: 81 GASLVQEASVAYERARSGQLNFGAYLQQVLAALP--PWMLELLDRFHLTTRAELQARLTT 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + F+ A G L + +S M+ LFF RDG ++ ++ L + Sbjct: 139 IGAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFLLRDGARLAARIREAIP-LDARHK 197 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 ++++ VIR+T G ++A +G + G +WL + V GV+ A ++++P GA Sbjct: 198 EQLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVMWGVLMAFLSLLPAVGAS 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+IY L G A L +G + +VD LRP LVG KLP +GG Sbjct: 258 LIWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GL G IGP++ AL W + Sbjct: 318 MALFGLTGFVIGPMIAALFIATWDLFAPHDGSER 351 >gi|15802100|ref|NP_288122.1| putative inner membrane protein [Escherichia coli O157:H7 EDL933] gi|15831649|ref|NP_310422.1| inner membrane protein [Escherichia coli O157:H7 str. Sakai] gi|168751901|ref|ZP_02776923.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4113] gi|168756686|ref|ZP_02781693.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4401] gi|168762251|ref|ZP_02787258.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4501] gi|168770447|ref|ZP_02795454.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4486] gi|168775015|ref|ZP_02800022.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4196] gi|168782100|ref|ZP_02807107.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4076] gi|168789822|ref|ZP_02814829.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC869] gi|168800134|ref|ZP_02825141.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC508] gi|195937372|ref|ZP_03082754.1| putative inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208810488|ref|ZP_03252364.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4206] gi|208816562|ref|ZP_03257682.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4045] gi|208820705|ref|ZP_03261025.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4042] gi|209397418|ref|YP_002270757.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4115] gi|217328985|ref|ZP_03445066.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. TW14588] gi|254793305|ref|YP_003078142.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261227867|ref|ZP_05942148.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258399|ref|ZP_05950932.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291282818|ref|YP_003499636.1| Inner membrane protein YdiK [Escherichia coli O55:H7 str. CB9615] gi|12515693|gb|AAG56675.1|AE005392_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13361862|dbj|BAB35818.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187769380|gb|EDU33224.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4196] gi|188014138|gb|EDU52260.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4113] gi|189000250|gb|EDU69236.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4076] gi|189356127|gb|EDU74546.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4401] gi|189360631|gb|EDU79050.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4486] gi|189367449|gb|EDU85865.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4501] gi|189370582|gb|EDU88998.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC869] gi|189377566|gb|EDU95982.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC508] gi|208725004|gb|EDZ74711.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4206] gi|208730905|gb|EDZ79594.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4045] gi|208740828|gb|EDZ88510.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4042] gi|209158818|gb|ACI36251.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4115] gi|209769108|gb|ACI82866.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769110|gb|ACI82867.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769112|gb|ACI82868.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769114|gb|ACI82869.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769116|gb|ACI82870.1| hypothetical protein ECs2395 [Escherichia coli] gi|217318332|gb|EEC26759.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. TW14588] gi|254592705|gb|ACT72066.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|290762691|gb|ADD56652.1| Inner membrane protein YdiK [Escherichia coli O55:H7 str. CB9615] gi|320188374|gb|EFW63036.1| Putative membrane protein [Escherichia coli O157:H7 str. EC1212] gi|320641903|gb|EFX11271.1| putative inner membrane protein [Escherichia coli O157:H7 str. G5101] gi|320647359|gb|EFX16167.1| putative inner membrane protein [Escherichia coli O157:H- str. 493-89] gi|320652653|gb|EFX20922.1| putative inner membrane protein [Escherichia coli O157:H- str. H 2687] gi|320653038|gb|EFX21234.1| putative inner membrane protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658722|gb|EFX26399.1| putative inner membrane protein [Escherichia coli O55:H7 str. USDA 5905] gi|320668712|gb|EFX35517.1| putative inner membrane protein [Escherichia coli O157:H7 str. LSU-61] gi|326342053|gb|EGD65834.1| Putative membrane protein [Escherichia coli O157:H7 str. 1044] gi|326343605|gb|EGD67367.1| Putative membrane protein [Escherichia coli O157:H7 str. 1125] Length = 370 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|194434783|ref|ZP_03067033.1| inner membrane protein YdiK [Shigella dysenteriae 1012] gi|194416952|gb|EDX33071.1| inner membrane protein YdiK [Shigella dysenteriae 1012] gi|332093944|gb|EGI98997.1| hypothetical protein SD15574_1835 [Shigella dysenteriae 155-74] Length = 370 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFATWVEEVPPPTDQP 355 >gi|215486863|ref|YP_002329294.1| putative inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|215264935|emb|CAS09321.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 370 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLKTIPVIGTKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|312966841|ref|ZP_07781059.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312288305|gb|EFR16207.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 370 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLKTIPVIGTKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|85711221|ref|ZP_01042281.1| Predicted permease PerM family protein [Idiomarina baltica OS145] gi|85695134|gb|EAQ33072.1| Predicted permease PerM family protein [Idiomarina baltica OS145] Length = 348 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 8/348 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + R ++ ++ VS+ F LK F+A + A + +P+ S Sbjct: 1 MQDKLETRSFLLMLLAVSIAFALILKPFWASIFWACAVAVIFYPLQIRLKRMLGRRSNRA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ + + ++P+L + Y + E +L K+ + + + G + +L Sbjct: 61 ALLTLLIATVIVVIPVLLVAYSFIQEGVQLYQKLSSGDVSIAQIVDKIEK--GLPFLPDL 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + +SL + + F + A G + +++ M+ FF RDG Sbjct: 119 LARLGIDIESLPERISQW-AMSASQFFAQEALVVGQNTFGFVMNLGLMLYLTFFLLRDGN 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + L ++ + +V R+T G ++A+ +G + G + L G+P+ V Sbjct: 178 KLIRLMVRALP-LGDEREHQLFKKFAEVTRATVKGNIVVAMVQGALGGVIFALLGIPAPV 236 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ A +++IP GA I + VS+YLL G F L L+G I + + D LRP LV Sbjct: 237 LWGVVMAFLSLIPAVGAGIVWLPVSVYLLATGATFEGIVLVLYGLIIIGLADNALRPLLV 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G KLP F +GG+ G+ G IGP++ AL W Sbjct: 297 GRDTKLPDYVVLFSTLGGLSLFGITGFVIGPLIAALFLAFWDMFTHEF 344 >gi|218558557|ref|YP_002391470.1| inner membrane protein [Escherichia coli S88] gi|218365326|emb|CAR03047.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] Length = 370 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ + N +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLIKAISSGN-MTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|320175148|gb|EFW50259.1| putative membrane protein [Shigella dysenteriae CDC 74-1112] Length = 370 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|58038598|ref|YP_190562.1| putative permease [Gluconobacter oxydans 621H] gi|58001012|gb|AAW59906.1| Putative permease [Gluconobacter oxydans 621H] Length = 374 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 90/339 (26%), Positives = 169/339 (49%), Gaps = 6/339 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ +F + + LY LKGF +L + + WP+Y + S +L ++ T Sbjct: 25 QRRARGFLALFFVAIGLYTLKGFLPALLWGCVFAISIWPLYRRTELRF-GRSDWLPMVFT 83 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 ++V +F+VP+ + E + + + +GIP+P W+ +P A+ W H Sbjct: 84 LAVALIFLVPVSLVGVKVADEARSALEWIDDVRNNGIPMPEWVPHLPFLSAQATNWWQNH 143 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ PQ L L + +G+ + S+ + S++ + L +DG S+ + Sbjct: 144 MTSPQRLSHLLHSVDVGHGMQMTKQVGSQLARRGTLFAFSLLTLFFLL----KDGDSVIR 199 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + LF + +++ + + T G+ ++ +GEG ++G Y G P + + Sbjct: 200 KCLLGSQRLFGEQGESLAKQMISSVHGTLAGLVLVGLGEGAIMGIVYMATGAPQPLLFAM 259 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +TA+ AMIP A + V++ LL K ++ A + G++ +FI D +RP L+GG K Sbjct: 260 VTAVAAMIPFLAWPTVGLVALLLLAKSSMIGAIVVSAVGSVVIFIADHFIRPALIGGSTK 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +PFL G++GG T GLLGLF+GP +MA + ++W Sbjct: 320 MPFLWVLLGILGGAETWGLLGLFLGPAIMAALHLLWTLW 358 >gi|16129644|ref|NP_416203.1| inner membrane protein, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|24113077|ref|NP_707587.1| putative inner membrane protein [Shigella flexneri 2a str. 301] gi|30063202|ref|NP_837373.1| putative inner membrane protein [Shigella flexneri 2a str. 2457T] gi|82543942|ref|YP_407889.1| inner membrane protein [Shigella boydii Sb227] gi|82776939|ref|YP_403288.1| putative inner membrane protein [Shigella dysenteriae Sd197] gi|89108528|ref|AP_002308.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|91210901|ref|YP_540887.1| putative inner membrane protein [Escherichia coli UTI89] gi|110805665|ref|YP_689185.1| putative inner membrane protein [Shigella flexneri 5 str. 8401] gi|117623867|ref|YP_852780.1| putative inner membrane protein [Escherichia coli APEC O1] gi|157157163|ref|YP_001462982.1| putative inner membrane protein [Escherichia coli E24377A] gi|157161153|ref|YP_001458471.1| putative inner membrane protein [Escherichia coli HS] gi|170019962|ref|YP_001724916.1| putative inner membrane protein [Escherichia coli ATCC 8739] gi|170081348|ref|YP_001730668.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187732656|ref|YP_001880447.1| putative inner membrane protein [Shigella boydii CDC 3083-94] gi|188492403|ref|ZP_02999673.1| putative membrane protein [Escherichia coli 53638] gi|191167867|ref|ZP_03029672.1| inner membrane protein YdiK [Escherichia coli B7A] gi|193065271|ref|ZP_03046343.1| inner membrane protein YdiK [Escherichia coli E22] gi|193068945|ref|ZP_03049904.1| inner membrane protein YdiK [Escherichia coli E110019] gi|194429510|ref|ZP_03062032.1| inner membrane protein YdiK [Escherichia coli B171] gi|194438554|ref|ZP_03070643.1| inner membrane protein YdiK [Escherichia coli 101-1] gi|209919002|ref|YP_002293086.1| putative inner membrane protein [Escherichia coli SE11] gi|218554254|ref|YP_002387167.1| hypothetical protein ECIAI1_1740 [Escherichia coli IAI1] gi|218695249|ref|YP_002402916.1| putative inner membrane protein [Escherichia coli 55989] gi|237705634|ref|ZP_04536115.1| inner membrane protein YdiK [Escherichia sp. 3_2_53FAA] gi|238900903|ref|YP_002926699.1| putative inner membrane protein [Escherichia coli BW2952] gi|253773356|ref|YP_003036187.1| inner membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161749|ref|YP_003044857.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|256018118|ref|ZP_05431983.1| putative inner membrane protein [Shigella sp. D9] gi|256022649|ref|ZP_05436514.1| putative inner membrane protein [Escherichia sp. 4_1_40B] gi|260843994|ref|YP_003221772.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260855512|ref|YP_003229403.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|293415004|ref|ZP_06657647.1| inner membrane protein [Escherichia coli B185] gi|293446062|ref|ZP_06662484.1| inner membrane protein [Escherichia coli B088] gi|300818325|ref|ZP_07098535.1| hypothetical protein HMPREF9345_03403 [Escherichia coli MS 107-1] gi|300821439|ref|ZP_07101586.1| hypothetical protein HMPREF9346_01266 [Escherichia coli MS 119-7] gi|300904539|ref|ZP_07122378.1| hypothetical protein HMPREF9536_02615 [Escherichia coli MS 84-1] gi|300918058|ref|ZP_07134679.1| hypothetical protein HMPREF9540_01865 [Escherichia coli MS 115-1] gi|300924723|ref|ZP_07140669.1| hypothetical protein HMPREF9548_02850 [Escherichia coli MS 182-1] gi|300930842|ref|ZP_07146212.1| hypothetical protein HMPREF9550_03100 [Escherichia coli MS 187-1] gi|300951280|ref|ZP_07165129.1| hypothetical protein HMPREF9541_04601 [Escherichia coli MS 116-1] gi|300958569|ref|ZP_07170699.1| hypothetical protein HMPREF9547_04277 [Escherichia coli MS 175-1] gi|301027867|ref|ZP_07191168.1| hypothetical protein HMPREF9551_03793 [Escherichia coli MS 196-1] gi|301303203|ref|ZP_07209329.1| hypothetical protein HMPREF9347_01794 [Escherichia coli MS 124-1] gi|301326548|ref|ZP_07219889.1| hypothetical protein HMPREF9535_01500 [Escherichia coli MS 78-1] gi|301647871|ref|ZP_07247653.1| hypothetical protein HMPREF9543_04379 [Escherichia coli MS 146-1] gi|306815059|ref|ZP_07449215.1| putative inner membrane protein [Escherichia coli NC101] gi|307138347|ref|ZP_07497703.1| putative inner membrane protein [Escherichia coli H736] gi|307310741|ref|ZP_07590387.1| protein of unknown function UPF0118 [Escherichia coli W] gi|309788635|ref|ZP_07683235.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309793455|ref|ZP_07687882.1| hypothetical protein HMPREF9348_00614 [Escherichia coli MS 145-7] gi|331642286|ref|ZP_08343421.1| putative permease [Escherichia coli H736] gi|331647179|ref|ZP_08348273.1| putative permease [Escherichia coli M605] gi|331653088|ref|ZP_08354093.1| putative permease [Escherichia coli M718] gi|331657665|ref|ZP_08358627.1| putative permease [Escherichia coli TA206] gi|331668373|ref|ZP_08369221.1| putative permease [Escherichia coli TA271] gi|331683195|ref|ZP_08383796.1| putative permease [Escherichia coli H299] gi|84027918|sp|P0AFS7|YDIK_ECOLI RecName: Full=UPF0118 inner membrane protein ydiK gi|84027919|sp|P0AFS8|YDIK_SHIFL RecName: Full=UPF0118 inner membrane protein ydiK gi|1742759|dbj|BAA15450.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|1787979|gb|AAC74758.1| inner membrane protein, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|24052052|gb|AAN43294.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30041454|gb|AAP17182.1| hypothetical protein S1850 [Shigella flexneri 2a str. 2457T] gi|81241087|gb|ABB61797.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|81245353|gb|ABB66061.1| conserved hypothetical protein [Shigella boydii Sb227] gi|91072475|gb|ABE07356.1| putative purine regulated protein YdiK [Escherichia coli UTI89] gi|110615213|gb|ABF03880.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115512991|gb|ABJ01066.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157066833|gb|ABV06088.1| inner membrane protein YdiK [Escherichia coli HS] gi|157079193|gb|ABV18901.1| inner membrane protein YdiK [Escherichia coli E24377A] gi|169754890|gb|ACA77589.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|169889183|gb|ACB02890.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187429648|gb|ACD08922.1| inner membrane protein YdiK [Shigella boydii CDC 3083-94] gi|188487602|gb|EDU62705.1| putative membrane protein [Escherichia coli 53638] gi|190902126|gb|EDV61870.1| inner membrane protein YdiK [Escherichia coli B7A] gi|192927065|gb|EDV81687.1| inner membrane protein YdiK [Escherichia coli E22] gi|192957740|gb|EDV88184.1| inner membrane protein YdiK [Escherichia coli E110019] gi|194412474|gb|EDX28774.1| inner membrane protein YdiK [Escherichia coli B171] gi|194422564|gb|EDX38562.1| inner membrane protein YdiK [Escherichia coli 101-1] gi|209912261|dbj|BAG77335.1| putative transport protein [Escherichia coli SE11] gi|218351981|emb|CAU97713.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218361022|emb|CAQ98597.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|222033444|emb|CAP76185.1| UPF0118 inner membrane protein ydiK [Escherichia coli LF82] gi|226900391|gb|EEH86650.1| inner membrane protein YdiK [Escherichia sp. 3_2_53FAA] gi|238862554|gb|ACR64552.1| predicted inner membrane protein [Escherichia coli BW2952] gi|253324400|gb|ACT29002.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973650|gb|ACT39321.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253977844|gb|ACT43514.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|257754161|dbj|BAI25663.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257759141|dbj|BAI30638.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260449189|gb|ACX39611.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|281601125|gb|ADA74109.1| inner membrane protein ydiK [Shigella flexneri 2002017] gi|291322892|gb|EFE62320.1| inner membrane protein [Escherichia coli B088] gi|291432652|gb|EFF05631.1| inner membrane protein [Escherichia coli B185] gi|294492598|gb|ADE91354.1| inner membrane protein YdiK [Escherichia coli IHE3034] gi|299879023|gb|EFI87234.1| hypothetical protein HMPREF9551_03793 [Escherichia coli MS 196-1] gi|300314778|gb|EFJ64562.1| hypothetical protein HMPREF9547_04277 [Escherichia coli MS 175-1] gi|300403533|gb|EFJ87071.1| hypothetical protein HMPREF9536_02615 [Escherichia coli MS 84-1] gi|300414749|gb|EFJ98059.1| hypothetical protein HMPREF9540_01865 [Escherichia coli MS 115-1] gi|300419101|gb|EFK02412.1| hypothetical protein HMPREF9548_02850 [Escherichia coli MS 182-1] gi|300449461|gb|EFK13081.1| hypothetical protein HMPREF9541_04601 [Escherichia coli MS 116-1] gi|300461317|gb|EFK24810.1| hypothetical protein HMPREF9550_03100 [Escherichia coli MS 187-1] gi|300525942|gb|EFK47011.1| hypothetical protein HMPREF9346_01266 [Escherichia coli MS 119-7] gi|300528965|gb|EFK50027.1| hypothetical protein HMPREF9345_03403 [Escherichia coli MS 107-1] gi|300841612|gb|EFK69372.1| hypothetical protein HMPREF9347_01794 [Escherichia coli MS 124-1] gi|300846768|gb|EFK74528.1| hypothetical protein HMPREF9535_01500 [Escherichia coli MS 78-1] gi|301074012|gb|EFK88818.1| hypothetical protein HMPREF9543_04379 [Escherichia coli MS 146-1] gi|305851707|gb|EFM52160.1| putative inner membrane protein [Escherichia coli NC101] gi|306908919|gb|EFN39415.1| protein of unknown function UPF0118 [Escherichia coli W] gi|308123042|gb|EFO60304.1| hypothetical protein HMPREF9348_00614 [Escherichia coli MS 145-7] gi|308923457|gb|EFP68964.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309701913|emb|CBJ01225.1| putative membrane protein [Escherichia coli ETEC H10407] gi|312946288|gb|ADR27115.1| putative inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|313648970|gb|EFS13407.1| hypothetical protein SF2457T_2635 [Shigella flexneri 2a str. 2457T] gi|313848654|emb|CAQ32163.2| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|315060993|gb|ADT75320.1| predicted inner membrane protein [Escherichia coli W] gi|315136329|dbj|BAJ43488.1| putative inner membrane protein [Escherichia coli DH1] gi|315257509|gb|EFU37477.1| putative membrane protein [Escherichia coli MS 85-1] gi|315286386|gb|EFU45822.1| hypothetical protein HMPREF9539_03668 [Escherichia coli MS 110-3] gi|315299716|gb|EFU58956.1| hypothetical protein HMPREF9545_01227 [Escherichia coli MS 16-3] gi|315618883|gb|EFU99466.1| conserved hypothetical protein [Escherichia coli 3431] gi|320181288|gb|EFW56207.1| Putative membrane protein [Shigella boydii ATCC 9905] gi|320184437|gb|EFW59245.1| Putative membrane protein [Shigella flexneri CDC 796-83] gi|320197870|gb|EFW72478.1| Putative membrane protein [Escherichia coli EC4100B] gi|323153078|gb|EFZ39347.1| hypothetical protein ECEPECA14_5161 [Escherichia coli EPECa14] gi|323163462|gb|EFZ49288.1| hypothetical protein ECE128010_0313 [Escherichia coli E128010] gi|323170001|gb|EFZ55657.1| hypothetical protein ECLT68_5645 [Escherichia coli LT-68] gi|323186039|gb|EFZ71395.1| hypothetical protein ECOK1357_0501 [Escherichia coli 1357] gi|323378435|gb|ADX50703.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323937291|gb|EGB33570.1| ydiK protein [Escherichia coli E1520] gi|323940645|gb|EGB36836.1| ydiK protein [Escherichia coli E482] gi|323948016|gb|EGB44008.1| ydiK protein [Escherichia coli H120] gi|323952195|gb|EGB48068.1| ydiK protein [Escherichia coli H252] gi|323973932|gb|EGB69104.1| ydiK protein [Escherichia coli TA007] gi|324016518|gb|EGB85737.1| hypothetical protein HMPREF9542_04862 [Escherichia coli MS 117-3] gi|324119172|gb|EGC13060.1| ydiK protein [Escherichia coli E1167] gi|330911495|gb|EGH40005.1| putative membrane protein [Escherichia coli AA86] gi|331039084|gb|EGI11304.1| putative permease [Escherichia coli H736] gi|331043962|gb|EGI16098.1| putative permease [Escherichia coli M605] gi|331049186|gb|EGI21258.1| putative permease [Escherichia coli M718] gi|331055913|gb|EGI27922.1| putative permease [Escherichia coli TA206] gi|331063567|gb|EGI35478.1| putative permease [Escherichia coli TA271] gi|331079410|gb|EGI50607.1| putative permease [Escherichia coli H299] gi|332090828|gb|EGI95920.1| hypothetical protein SB521682_1834 [Shigella boydii 5216-82] gi|332096073|gb|EGJ01078.1| hypothetical protein SB359474_1615 [Shigella boydii 3594-74] gi|332101515|gb|EGJ04861.1| inner membrane protein YdiK [Shigella sp. D9] Length = 370 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|261323287|ref|ZP_05962484.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261299267|gb|EEY02764.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 354 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 7/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ + +CL I+P+L +F + E L ++ + +++ I + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSRE---FDINGYIARIMAALPESLEEW 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + G FG L + + M+ LFF +RDG Sbjct: 120 LKRFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGA 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 DVGKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAAL 238 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LR LV Sbjct: 239 LWGVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRLPLV 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GKGTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQH 350 >gi|26247938|ref|NP_753978.1| putative inner membrane protein [Escherichia coli CFT073] gi|110641809|ref|YP_669539.1| putative inner membrane protein [Escherichia coli 536] gi|191171652|ref|ZP_03033199.1| inner membrane protein YdiK [Escherichia coli F11] gi|218689630|ref|YP_002397842.1| putative inner membrane protein [Escherichia coli ED1a] gi|218699747|ref|YP_002407376.1| putative inner membrane protein [Escherichia coli IAI39] gi|227885892|ref|ZP_04003697.1| inner membrane protein [Escherichia coli 83972] gi|300938988|ref|ZP_07153686.1| hypothetical protein HMPREF9530_03822 [Escherichia coli MS 21-1] gi|300987762|ref|ZP_07178340.1| hypothetical protein HMPREF9553_03359 [Escherichia coli MS 200-1] gi|300994853|ref|ZP_07180966.1| hypothetical protein HMPREF9531_05248 [Escherichia coli MS 45-1] gi|301050981|ref|ZP_07197827.1| hypothetical protein HMPREF9549_04881 [Escherichia coli MS 185-1] gi|331673244|ref|ZP_08374012.1| putative permease [Escherichia coli TA280] gi|26108341|gb|AAN80543.1|AE016761_118 Hypothetical protein ydiK [Escherichia coli CFT073] gi|110343401|gb|ABG69638.1| hypothetical protein YdiK [Escherichia coli 536] gi|190907982|gb|EDV67574.1| inner membrane protein YdiK [Escherichia coli F11] gi|218369733|emb|CAR17504.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|218427194|emb|CAR08080.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|227837465|gb|EEJ47931.1| inner membrane protein [Escherichia coli 83972] gi|281178758|dbj|BAI55088.1| putative transport protein [Escherichia coli SE15] gi|284921609|emb|CBG34681.1| putative membrane protein [Escherichia coli 042] gi|300297358|gb|EFJ53743.1| hypothetical protein HMPREF9549_04881 [Escherichia coli MS 185-1] gi|300306050|gb|EFJ60570.1| hypothetical protein HMPREF9553_03359 [Escherichia coli MS 200-1] gi|300406193|gb|EFJ89731.1| hypothetical protein HMPREF9531_05248 [Escherichia coli MS 45-1] gi|300456091|gb|EFK19584.1| hypothetical protein HMPREF9530_03822 [Escherichia coli MS 21-1] gi|307553709|gb|ADN46484.1| predicted inner membrane protein YdiK [Escherichia coli ABU 83972] gi|315290535|gb|EFU49909.1| hypothetical protein HMPREF9544_05061 [Escherichia coli MS 153-1] gi|320195417|gb|EFW70042.1| Putative membrane protein [Escherichia coli WV_060327] gi|324007042|gb|EGB76261.1| hypothetical protein HMPREF9532_03276 [Escherichia coli MS 57-2] gi|324011447|gb|EGB80666.1| hypothetical protein HMPREF9533_04541 [Escherichia coli MS 60-1] gi|331069442|gb|EGI40829.1| putative permease [Escherichia coli TA280] Length = 370 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|170680839|ref|YP_001743566.1| putative inner membrane protein [Escherichia coli SMS-3-5] gi|170518557|gb|ACB16735.1| inner membrane protein YdiK [Escherichia coli SMS-3-5] Length = 370 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKFMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|295676075|ref|YP_003604599.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] gi|295435918|gb|ADG15088.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 371 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 158/356 (44%), Gaps = 5/356 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y Sbjct: 1 MKSDQLIERLAAVFALIVLVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTGVVGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWA 119 A + + ++ + + P ++ + + E+V+ V + G+P +P W+ IP + Sbjct: 61 LAATMIVLIILVVVLGPFVYAGFAFGAHVHEIVALVQRLFESGLPDLPPWVQRIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A LSI+ FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAALAVTHGLGLLALSIVLA----FFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + + ++ G+ A+ +G++ G +W+AGVP Sbjct: 177 GGEGAAAWLNAGMRRVAGERAEYLLALAGSTVKGVVYGILGTALVQGVLAGFGFWVAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++T ++++PGG + + +I+L G+ A L +WG + + + D ++P Sbjct: 237 APALLGLVTFFLSVVPGGPVVVWLPAAIWLYQGGSTGWAIFLVVWGLLVVGMADNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+G +P + G++GG G LG+FIGP L+A+ + + + + + Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAHTVLHDWTIGASAAQTQ 352 >gi|170768895|ref|ZP_02903348.1| inner membrane protein YdiK [Escherichia albertii TW07627] gi|170122443|gb|EDS91374.1| inner membrane protein YdiK [Escherichia albertii TW07627] Length = 370 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 137/343 (39%), Gaps = 7/343 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G +AGVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVAGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNIIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQ 354 >gi|293410002|ref|ZP_06653578.1| inner membrane protein [Escherichia coli B354] gi|291470470|gb|EFF12954.1| inner membrane protein [Escherichia coli B354] Length = 370 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G + Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVGQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|83644526|ref|YP_432961.1| permease [Hahella chejuensis KCTC 2396] gi|83632569|gb|ABC28536.1| predicted permease [Hahella chejuensis KCTC 2396] Length = 361 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 5/336 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + FF + A ++ P++ I + A++ ++ + + ++PL + Sbjct: 23 LLILPFFYAIFWAAMLAILFAPLHRWLIRRFPGRDNISALLTLLASLLIVVIPLAVMMTM 82 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E + +V I + + M + + + Sbjct: 83 LAKEGARVYQQVSSGE---IQLQALVDKARATMPVIQELAERFDIDLGNVKQMLSQAALT 139 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G F A FG +L + +S + M+ FFF RDG S+ Q L L + Sbjct: 140 GSKFFATQAFNFGQEYLQFTVSFVLMLYLTFFFLRDGGSLIQLLIRALP-LGDTREMHLF 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + +V R+T G ++AI +G + G +W G+ + GV+ +++++P G+ + + Sbjct: 199 QKFAEVSRATVKGNLVVAIVQGTLGGLIFWALGIKGALLWGVVMVVLSLLPAVGSALVWA 258 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + YL G++F L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 PAAAYLFFSGDVFKGVVLVLFGFFVIGLVDNVLRPVLVGRDTKMPDYLVLLSTLGGLSLF 318 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL G +GPVL AL W+ + N+EK S+ Sbjct: 319 GLNGFVLGPVLTALFLAFWQIFMEEFNNNEEKSISD 354 >gi|323978175|gb|EGB73261.1| ydiK protein [Escherichia coli TW10509] Length = 370 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKLRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|260868179|ref|YP_003234581.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|257764535|dbj|BAI36030.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|323181004|gb|EFZ66542.1| hypothetical protein ECOK1180_0300 [Escherichia coli 1180] Length = 370 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G + Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVVQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|74311987|ref|YP_310406.1| putative inner membrane protein [Shigella sonnei Ss046] gi|73855464|gb|AAZ88171.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323169258|gb|EFZ54934.1| hypothetical protein SS53G_0428 [Shigella sonnei 53G] Length = 370 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGSIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|323187112|gb|EFZ72428.1| hypothetical protein ECRN5871_4699 [Escherichia coli RN587/1] Length = 370 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G + Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVVQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|296160670|ref|ZP_06843485.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295889196|gb|EFG68999.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 371 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 77/354 (21%), Positives = 155/354 (43%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWA 119 + A + ++ + + P ++ + + ++V+ V + G+P +P W++ IP + Sbjct: 61 WAATLIVFIILIVVLGPFVYAGFAFGAHVHDIVALVQRLFEAGLPDLPSWVARIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A LSI+ FFFY Sbjct: 121 IETFWERLTSSNSELIAQLRTLAAPAGKWILAAAIAVTHGLGLLALSIVLA----FFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + ++ G+ A+ +G++ G W+AGVP Sbjct: 177 GGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 237 APALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G +P + G++GG G LG+FIGP L+A+ + + + + Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPAAR 350 >gi|148555776|ref|YP_001263358.1| hypothetical protein Swit_2868 [Sphingomonas wittichii RW1] gi|148500966|gb|ABQ69220.1| protein of unknown function UPF0118 [Sphingomonas wittichii RW1] Length = 358 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 137/333 (41%), Gaps = 3/333 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ + + + FF +L L++ P++ + + S A+I + ++ Sbjct: 17 FLALVLIVTVAFAMVIAPFFGAILWGLVLALMFSPVHRRILDRMPGRSNVAALITLLIII 76 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+P FL + E + + V + ++ WAS Sbjct: 77 LIVILPAAFLGSAMIQEFLHVYAMVQSGQIDIARMFEQMTGALP-DWASHWLAARGLTDF 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + I A + G L+ L + M+ FF RDG +++++ Sbjct: 136 AAARQQISETLSGSFSAIAAHALQVGQGALNLVLMLGVMLYLTFFLIRDGEELARRVIE- 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L P + + R V R+T G I+AI +G G + L G+ + G + AI Sbjct: 195 SIPLDPDRRRAVIRNFTVVTRATIKGSLIVAIVQGFTGGVTFALLGIEGALLWGTMMAIF 254 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G I + V++YL G + L + GA+ + +D LRP LVG ++P Sbjct: 255 SLIPAIGCGIVWVPVALYLFATGAVVKGIILVVAGALVIGSIDNVLRPLLVGRDTRMPDY 314 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG++ G G +GPV+ AL W Sbjct: 315 VVLISTLGGLQLFGFHGFIVGPVVAALFIGTWN 347 >gi|212712086|ref|ZP_03320214.1| hypothetical protein PROVALCAL_03165 [Providencia alcalifaciens DSM 30120] gi|212685608|gb|EEB45136.1| hypothetical protein PROVALCAL_03165 [Providencia alcalifaciens DSM 30120] Length = 371 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 133/344 (38%), Gaps = 6/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+I + L F + A ++ +WPI ++ ++ + + LF+ Sbjct: 20 IIFMIATCFWVLSPFILGFIWAGMMVIATWPILLRLEARLWHKRWLASLTMVLLIFLLFV 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +P L + L+ +P WL+ IP G W ++ + Sbjct: 80 IPTSILIGSIIQNSAPLIELAKSPTNMTLPDLEWLNQIPMVGEKLYYAWHSLVASGGNAL 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A L ++F + Y G ++ + Sbjct: 140 LAKVQPYFGQAAGWFATQAISASRFLFHLVLMLLFSGL----LYYKGELVTLGVRHFAVR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + +V G L+G+ L V+ I + Sbjct: 196 LAGIRGDAAVVLAAQSIRAVALGVVVTALIQAIVGGIGLALSGISYAAILTVLIFICCVA 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + ++L G+ A L +W A + +D LRP+L+ LP + Sbjct: 256 QLGPLLVMVPSVLWLFWTGDTTWAIILGVW-AAVVATMDGVLRPWLIKMGADLPMVLILV 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + K + + E + + Sbjct: 315 GVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAPPSEDLEA 358 >gi|157370415|ref|YP_001478404.1| hypothetical protein Spro_2175 [Serratia proteamaculans 568] gi|157322179|gb|ABV41276.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 366 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 138/347 (39%), Gaps = 8/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ + ++ F A ++ +WP+ + ++ T+ ++ L Sbjct: 18 LFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILWGRRSLAVLVMTILLILL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 FI+P+ L + +V+ + IP WL IP G T + Sbjct: 78 FILPISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMIGDKVYHSYHTLVNAGGS 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + F+ + A+ G + L L ++F ++ Y G ++ + Sbjct: 138 ALVAKVQPYFGQTATWFVAQ-AAHIGRLLLHCTLMLLFSVL----LYARGEQVALGIRHF 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + IR+ LG+ + A+ + ++ G + G+P+ L V+ I Sbjct: 193 ATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIPAATLLTVLIFIC 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I+L G+ T L +W + +D LRP L+ LP + Sbjct: 253 CVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSC-VVATLDNVLRPVLIRMGADLPMIL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 312 ILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEE 358 >gi|27904620|ref|NP_777746.1| putative inner membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46397200|sp|Q89AW1|Y117_BUCBP RecName: Full=UPF0118 membrane protein bbp_117 gi|27904017|gb|AAO26851.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 368 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 8/351 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 RE M PQ I + +FI+++S L+ ++ FF A ++ +WPI+ + Sbjct: 5 REGMDLPQVIFSLVFIFIMIISSLWIMRPFFLGFAWASMVVVATWPIFLKLQILLWGNRA 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 V+ T S++ +FI+P++ L + ++S + +++ P WL DIP G+ Sbjct: 65 CAVVMMTFSLLLVFIIPIVCLVNSLIDNSTSVISWL-SSDKFRFPSLEWLQDIPIIGIKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + K L+ + I +F A FG + L +IFM+I Y Sbjct: 124 FSSYQKLLNEGGAELITKVQPYMGKTTEFFVIQAGHFGR----FILHLIFMLIFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + + L + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 180 NGEKVQSVIRHFAIRLGSKSGDSVVLLAGQAIRAVALGVVVTALVQGILSGIGLAISGIP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++ G I+L G T L +W + I+D LRP Sbjct: 240 YSSLLMMLIIIFCLVQLGPLPVLIPAIIWLYWNGKTTWGTVLLIWSC-VVCILDHILRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ + LP + G++GG+ G++GLFIGPV++ + + + I Sbjct: 299 LIRIGVDLPTVLILSGVIGGLIAFGMIGLFIGPVVLIISYRLISSWMDEIP 349 >gi|257092178|ref|YP_003165819.1| hypothetical protein CAP2UW1_0541 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044702|gb|ACV33890.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 372 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 141/346 (40%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I SL+ L+ F ++ A ++ +WP+ + ++ T V+ + Sbjct: 18 LFLCVLIAASLWILRPFLPALIWATMVVVATWPLMLRAQRRFGNRRWPAVILMTFLVLLI 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMW-ASELWTKHLSHPQ 131 +VPL + E+ + + P W++D+P W ++W + + Sbjct: 78 LVVPLSVAIATIVGNADEITEWAKSLSSLHVQSPPAWVADVPFVGWRLEQIWQQTATTGG 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + N + FG++F+ + L++ + Y G + + Sbjct: 138 TELAAKVAPYAANLTRWFVSEIGSFGLVFVQFLLTVALCAV----LYASGEKAAAGVRRF 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 G L + + + R+ LG+ + A+ + ++ G +AGVP L + + Sbjct: 194 GYRLSGERGEGAVILAGQAARAVALGVGVTALVQSILGGIGLAIAGVPFAPVLTAVMFMF 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + ++L + T L +W AI + +D LRP L+ LP L Sbjct: 254 CIAQLGPGLVLVPAVVWLYWGDHTGWGTFLLIW-AIFVGTMDNFLRPVLIKQGADLPLLL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++GG+ GL+GLF+GPV++A+ + + I + + ++ Sbjct: 313 ILAGVIGGMLAFGLVGLFVGPVILAVGYTLLEAWINEVPHEIDSVA 358 >gi|209521729|ref|ZP_03270416.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209497846|gb|EDZ98014.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 371 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 75/351 (21%), Positives = 149/351 (42%), Gaps = 7/351 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y Sbjct: 1 MKSDQLIERLAAVFALIVLVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTGVVGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 A + + ++ + + P ++ + + ++V+ V + G+P +P W+ IP G Sbjct: 61 LAATLIVLIILVVVLGPFVYAGFAFGTHVHQIVALVERLFESGLPDLPPWVQRIPLVGSS 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + S L T G + G+ + I+ FFFY Sbjct: 121 IEAFWERVTSSNSELIAQLRTLAAPAGKWILAA-----GLAVTHGLGLLALSIVLAFFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + L++ + + + ++ G+ A+ + ++ G WLAGV Sbjct: 176 TGGEGAAAWLNAGMRRVAGERADYLLALAGSTVKGVVYGILGTALVQAVLAGFGCWLAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG+ T ++++PGG I + +I+L G+ A L +WG + + + D ++P Sbjct: 236 PAPALLGLATFFLSVVPGGPVIVWLPAAIWLYQGGSTGWAIFLVVWGVLVVGMSDNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+G +P + G++GG G LG+FIGP L+A+ + + + Sbjct: 296 ILIGKNSDMPLILVMLGILGGALAFGFLGVFIGPTLLAVAYTVLHDWTIGA 346 >gi|163853947|ref|YP_001641990.1| hypothetical protein Mext_4551 [Methylobacterium extorquens PA1] gi|163665552|gb|ABY32919.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 359 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 7/333 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSET 139 L E +L++ A ++GIPVP +++ +P G A +E W HL+H LSE Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSER 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+ D G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDL----TRSLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPR 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP Sbjct: 206 GERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAP 265 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GG Sbjct: 266 LAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 V T GLLGLF+GP +MA + ++W+E +E Sbjct: 326 VETFGLLGLFVGPAVMAALILLWREFTEGSEEP 358 >gi|218532888|ref|YP_002423704.1| hypothetical protein Mchl_5011 [Methylobacterium chloromethanicum CM4] gi|218525191|gb|ACK85776.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 359 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 7/333 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSET 139 L E +L++ A ++GIPVP +++ +P G A +E W HL+H LSE Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVAHLPYGAAAITEWWNAHLAHAGLAHELSER 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+ D G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDL----TRSLGAGLVHRVVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPR 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP Sbjct: 206 GERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAP 265 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GG Sbjct: 266 LAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 V T GLLGLF+GP +MA + ++W+E +E Sbjct: 326 VETFGLLGLFVGPAVMAALILLWREFTEGSEEP 358 >gi|261339537|ref|ZP_05967395.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] gi|288318351|gb|EFC57289.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] Length = 371 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 139/360 (38%), Gaps = 8/360 (2%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + +I+ L+ ++ F A + +WP+ Sbjct: 4 LRQPRDVAQILLSVLFLALMIIACLWIVQPFILGFAWAGTVVVATWPLLLRLQKMLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMW 118 ++ T+ + LFI+P+ L + ++ + V + +P WL+ IP G Sbjct: 64 ALAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVI-RAVSSGDMTLPDLAWLNSIPVIGAK 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W L S + + A+ G + L ++F + Y Sbjct: 123 LYSGWHGLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLVFSAL----LY 178 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G ++ + L + + +R+ LG+ + A+ + ++ G ++GV Sbjct: 179 WRGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAILGGIGLAVSGV 238 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P V+ + + G + I+L G+ T L +W + +D +RP Sbjct: 239 PYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYWTGDTTWGTVLLVWSC-VVGTMDNVIRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + I + Sbjct: 298 ILIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEIPPPGTDPDA 357 >gi|319763353|ref|YP_004127290.1| hypothetical protein Alide_2671 [Alicycliphilus denitrificans BC] gi|330825587|ref|YP_004388890.1| hypothetical protein Alide2_3027 [Alicycliphilus denitrificans K601] gi|317117914|gb|ADV00403.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans BC] gi|329310959|gb|AEB85374.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans K601] Length = 352 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 136/320 (42%), Gaps = 5/320 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + +++ P++ + + A I + + I+P++F+ Sbjct: 25 ILWPLNGAIFWGVVLAILFTPLHRRLLRRMPRRRNLAAFITLCICLVIVILPMVFIGISL 84 Query: 86 MLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + +G + + L+ +P W EL + + T + Sbjct: 85 VQEASVAYERARSGQLNYGAYLQQVLAALPA--WVLELLDRFHLTSMAELQARLTAVGAQ 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G L + +S M+ LFF RDG ++ ++ L + +++ Sbjct: 143 ASQFLATKALDVGQNTLQFIVSFGVMLYLLFFLLRDGPRLAARIRQAIP-LDTEHKNQLA 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 R VIR+T G ++A +G + G +W+ G+ V GV+ A ++++P GA + + Sbjct: 202 RKFTTVIRATVKGNIVVAAAQGALGGLIFWILGIQGPVMWGVLMAFLSLLPAVGASLIWG 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+IY L G+ A L +G + +VD LRP LVG K+P +GG+ Sbjct: 262 PVAIYFLATGSTGQAAILTAYGVGVIGLVDNLLRPLLVGKDTKMPDYVVLISTLGGMALF 321 Query: 324 GLLGLFIGPVLMALIAVIWK 343 GL G IGPV+ AL W Sbjct: 322 GLTGFVIGPVIAALFMATWD 341 >gi|323962179|gb|EGB57774.1| ydiK protein [Escherichia coli H489] Length = 370 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 136/344 (39%), Gaps = 7/344 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVALGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|168240872|ref|ZP_02665804.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339094|gb|EDZ25858.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 395 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|238025108|ref|YP_002909340.1| hypothetical protein bglu_2g17670 [Burkholderia glumae BGR1] gi|237879773|gb|ACR32105.1| Hypothetical protein bglu_2g17670 [Burkholderia glumae BGR1] Length = 356 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 96/337 (28%), Positives = 171/337 (50%), Gaps = 8/337 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVM 71 + ++ ++L+ ++ F + A +I WP I T +A++ T +V Sbjct: 23 VLYTVLVALALWIIRAFLPAIAWAGVIAIALWPALRRIDAIRWLSGRRTLVAILLTSAVG 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHP 130 L + P+ ++ ++ + V A +GIP+P + +P G + W +L+ P Sbjct: 83 LLLVAPVAIAVAQAAGQIHDVFAWVHDARANGIPLPDAVYHLPFGSRQVAAWWQANLAQP 142 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + +K + + FG L + FM++ LF +R G +S+ L Sbjct: 143 ----LHAPAGVKGMNGEAFVSYGKAFGSHVLHAAVLFGFMLVTLFVIFRAGPRMSESLMR 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + F A +++ + + T G+ ++ +GEG +LG AY +AGV LG++TA+ Sbjct: 199 GVQRAFGANGASLTQRMVSAVYGTVTGLVVVGLGEGALLGVAYAVAGVSHAALLGLVTAV 258 Query: 251 MAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 AM+P AP+ F +++L + KG A L ++GA+ +F+ + +RP L+GG +LPF Sbjct: 259 AAMLPFCAPVVFCGAALWLFLVKGAAAWAIGLAVFGAVVVFVAEHFVRPVLIGGSARLPF 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L FG++GG T GLLGLFIGP LM ++ V+W E + Sbjct: 319 LLVLFGILGGAETFGLLGLFIGPALMTVLTVLWSEWV 355 >gi|325497136|gb|EGC94995.1| inner membrane protein [Escherichia fergusonii ECD227] Length = 372 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 136/340 (40%), Gaps = 7/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F + A + +WP+ + ++ T+ ++ + Sbjct: 20 LFLAIMIVACLWIVQPFILGITWAGTVVIATWPVLLRLQKILFGRRSLAVLVMTLLLVMV 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 80 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 139 AIMAKVRPYIGTTTTWFVGQAAHLGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 195 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 255 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 314 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFAAWVDEVPPP 353 >gi|326386812|ref|ZP_08208432.1| hypothetical protein Y88_2706 [Novosphingobium nitrogenifigens DSM 19370] gi|326208731|gb|EGD59528.1| hypothetical protein Y88_2706 [Novosphingobium nitrogenifigens DSM 19370] Length = 386 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 80/361 (22%), Positives = 152/361 (42%), Gaps = 14/361 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + P+ ++ + L+ + F +L A+I+ P+ ++ + A Sbjct: 30 ATIPPRAFQIGLVAAATVGFLWLIAPFSGAILWAVIVTILFSPLNAALLRGLPGRRNTAA 89 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN--------QHGIPVPRWLSDIPG 115 +IA + ++ + +VP + L + E+ EL+S +A +P W Sbjct: 90 LIALLVIVAVLVVPAILLGKALVEELGELLSHAGMAGFDPGRAIATVQSFLPEWAHRWLS 149 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +L L+ P++L+ L G+ I G L L++ M+ F Sbjct: 150 DLGLGDL---GLADPETLRQRITRGL-AGGLQAIAPQILNVGQGALGLFLTLGVMLYLTF 205 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F RDG I+++++ L +++ V+R+T G IA+ +G + G +W+ Sbjct: 206 FLLRDGRGIAERIERALP-LPALQRRRLLSEFVSVVRATVKGSMTIAVVQGGIGGFTFWM 264 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+P + G+ + ++ P G + SIYLL G ++ LFL G + +D Sbjct: 265 LGLPGALLWGLAMGVFSLFPAVGTGFIWVPASIYLLATGAVWKGVILFLCGFFVISTIDN 324 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +RP LVG ++P +GG G G +GPV+ AL +W +++ E Sbjct: 325 VIRPILVGRDTQMPDYIVLISTLGGFNLFGFNGFVLGPVIAALFLSVWDIFGRGVQDEAE 384 Query: 355 K 355 Sbjct: 385 N 385 >gi|187919648|ref|YP_001888679.1| hypothetical protein Bphyt_4945 [Burkholderia phytofirmans PsJN] gi|187718086|gb|ACD19309.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 360 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 92/346 (26%), Positives = 174/346 (50%), Gaps = 7/346 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFL 62 + N + + + ++L++L+ ++ F A V A ++ WP+ +T + Sbjct: 19 LKNQKAASLVLYIGLVLLALWVVRDFIAVVAWAAVLAIALWPLLRKVEGNRWFTGRTTLI 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASE 121 A + T+++ L ++P+ + E ++ A ++GIP+P ++ +P G AS Sbjct: 79 AAVLTLAIALLVVLPVGVGIAQALREAHDMSDWFKDAQENGIPLPDFIQHLPFGAQQASA 138 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +L+ P + +K + FG FM+I LF ++ G Sbjct: 139 WWQANLAQP----LRGSAAMKGLHSTTVMTLGRHFGARAAHAVAVFGFMLITLFVIFQAG 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F ++ + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 195 PRLSSSLLKGVRRGFGEDGAQLLLRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHV 254 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++TAI AM+P AP++F +++L+ +G++ L ++G++ +FI + +RP L+ Sbjct: 255 ALLALVTAIAAMLPFCAPLTFGLAALWLVSQGSVAAGVGLAVFGSVVVFIAEHFVRPVLI 314 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 315 GNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVR 360 >gi|218548727|ref|YP_002382518.1| inner membrane protein [Escherichia fergusonii ATCC 35469] gi|218356268|emb|CAQ88885.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324113453|gb|EGC07428.1| inner membrane protein ydiK [Escherichia fergusonii B253] Length = 370 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 136/340 (40%), Gaps = 7/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F + A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGITWAGTVVIATWPVLLRLQKILFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHLGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFAAWVDEVPPP 351 >gi|317047270|ref|YP_004114918.1| hypothetical protein Pat9b_1040 [Pantoea sp. At-9b] gi|316948887|gb|ADU68362.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 367 Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 145/351 (41%), Gaps = 7/351 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 G ++ + + L +F+ + A I+ P+ S K + + +++ Sbjct: 7 NIGFFIVILAIVTVAFFDVLTPYFSAIFWAAILAVIFHPLKSLLRQKMGDRNGLASLVTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + PL + ++E+ + +K+ ++Q +P WA ++H Sbjct: 67 LIICLIVFTPLAIVTSSLVVELNTVYNKLQNNSSQFPTVFADLFQHLP--DWARNYLSEH 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G ++ G + + M+ LFF +DG + Sbjct: 125 HLNNAAQIQEKLSSFALKGGQYMAGSVFVIGKGTFTFTVGFGVMLYLLFFLLKDGAWLVN 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + V R+T G ++A+ +G++ G A+W+ + + G Sbjct: 185 LILEALP-LSTHVKHHLLLKFAAVSRATVKGTVVVAVVQGILGGLAFWITDIDGSLLWGA 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A +++IP G+ I + +I+ G ++ L + + + +VD LRP LVG Sbjct: 244 LMAFLSLIPAIGSAIIWVPAAIFFFATGALWKGLFLVGFFVVVVGLVDNILRPLLVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 K+P +GG+ G+ G IGP++ AL W +++ ++N++ + Sbjct: 304 KMPDYLILIATLGGMEVYGINGFVIGPLIAALFIACWN--LLSGRDNRDNV 352 >gi|284006304|emb|CBA71539.1| putative inner membrane protein [Arsenophonus nasoniae] Length = 369 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 133/337 (39%), Gaps = 6/337 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I + L+ F L A ++ +WP++ SK ++ T+ V+ L Sbjct: 18 IAILLMITACFWVLRPFILGFLWAGMVVIATWPLFKKIESKLWHKKWLASIAMTLIVILL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 F++P L + L+ + +P WL ++P G W +++ + Sbjct: 78 FVIPFAILIGSIIQNSGPLIEWAKSPAEIRLPELLWLKNLPFIGNKLFYGWHTLVANGGN 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I + A G + ++F + + G S+ + Sbjct: 138 TLISKLQPYVGEATSWFLAQAINAGRFMFHLIVMLLFSAL----LFLKGESVISSIRHFA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G LA VP L ++ + Sbjct: 194 IRLAGTRGDMAILLAGQSIRAVALGVVVTALIQAIISGIGLALADVPYAAILTILIFVCC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ A + +W I + +D LRP L+ L + Sbjct: 254 VAQLGPLLIMVPSIIWLFWSGDTSWAIIMIVWS-IIVATMDGVLRPILIKMGANLSMILI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G++GG+ + G++GLFIGPV++A+ + + + Sbjct: 313 LIGVIGGILSFGVIGLFIGPVVLAVSHNLLTAWMNDV 349 >gi|240141401|ref|YP_002965881.1| hypothetical protein MexAM1_META1p5000 [Methylobacterium extorquens AM1] gi|240011378|gb|ACS42604.1| Conserved hypothetical protein, putative inner membrane protein, putative permease [Methylobacterium extorquens AM1] Length = 359 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 103/333 (30%), Positives = 169/333 (50%), Gaps = 7/333 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSET 139 L E +L++ A ++GIPVP +++ +P G A ++ W HL+H LSE Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTDWWNAHLAHAGLAHELSER 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+ D G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDL----TRSLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPR 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP Sbjct: 206 GERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAP 265 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GG Sbjct: 266 LAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 V T GLLGLF+GP +MA + ++W+E E Sbjct: 326 VETFGLLGLFVGPAVMAALILLWREFTEGSGEP 358 >gi|307315631|ref|ZP_07595168.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306898698|gb|EFN29361.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 371 Score = 201 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 7/341 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L F + L A +I F++WP Y F A TV V+ + + PL Sbjct: 22 IGCTLVLWPFLSATLGAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLAL 81 Query: 81 LFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSE 138 L + LV+ V + G P P W+ +P G + W + + I + Sbjct: 82 LATTLADNISSLVAGVTNVLEQGPPAPPDWVRGLPIAGEGLATYWEGLAHNAPAFTIELK 141 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + A G +F L + I FF + G ++ + E + A Sbjct: 142 KVIGP-----FADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGA 196 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ +V + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G Sbjct: 197 RARRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGP 256 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + V+++L ++ +++ + +WG + + +D LRP+L+G LP L FGL+G Sbjct: 257 PFVWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GV GL+GLF+GP L+A+ +++E I A E + + S+ Sbjct: 317 GVLAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSS 357 >gi|85858614|ref|YP_460816.1| hypothetical protein SYN_02943 [Syntrophus aciditrophicus SB] gi|85721705|gb|ABC76648.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 363 Score = 201 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 149/357 (41%), Gaps = 8/357 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 L + I +I SL+ L+ F ++ +++I +WP + Sbjct: 9 PDLTRIILQILWIGILIASSLWILRPFLPSLIWSVMIVVATWPFMLKMETCLWRKRGLAV 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASE 121 ++++ LF+VP + + + V +P +P WLS +P G + Sbjct: 69 AAMMIAMLTLFVVPFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVPVVGSKLNT 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + P+ + + F+ A G+I L++ L++I I Y +G Sbjct: 129 AWEGVRTGPEGIAARLVPYAGKLLSWFL-SQAGSVGIIALEFLLTVIIAAI----LYVNG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S+ + L + ++ + K +R LG+ A+ + L+ G +AGVP+ Sbjct: 184 ETASKGVFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGVPAA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L + ++ + G + I+L G T L +W I +D LRP L+ Sbjct: 244 TVLTGVMFMLCIAQLGPGLVLFPAVIWLYWSGQTTWGTMLLVW-TIFACTIDNLLRPILI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L F G++GG+ + G++GLFIGPV++++ + + + + + + Sbjct: 303 KKGADLPMLLIFAGVIGGLASFGIVGLFIGPVVLSVTLRLLGVWVADTEVSPSREDA 359 >gi|71909098|ref|YP_286685.1| hypothetical protein Daro_3486 [Dechloromonas aromatica RCB] gi|71848719|gb|AAZ48215.1| Protein of unknown function UPF0118 [Dechloromonas aromatica RCB] Length = 375 Score = 201 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 149/349 (42%), Gaps = 7/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ +I +S++ L F A + A++I +WP++ S S+ V+ +V Sbjct: 10 NTLAILCILGLIGLSVWVLLPFLAATVWAVMIVVATWPLFKSLESRLGNRRAPAVVLMSV 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIP-GGMWASELWTKH 126 +++ L ++PL + +L + +G+P P W+ +P G + W + Sbjct: 70 AMLLLLVLPLWLAVDTIIEHSGQLAAAGKSMAANGLPPPPAWVKTLPLVGDRVASAWAQL 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + S + T + ++ A G + + + L + I Y G + ++ Sbjct: 130 DAAGTSGIVTKVTPYAADTGKWVLAQAGSVGGMLIQFLLVVTIAAI----LYSGGETGAR 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 G L + + + IR LG+ + AI + ++ G +AGVP L Sbjct: 186 TARRFGRRLAGDRGENSIILAGQAIRGVALGVGVTAIVQTVLGGVGLAVAGVPFASLLSA 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++ + G + ++ G+ AT L +W + + +D LRP L+ Sbjct: 246 VMLMLCIAQIGPMLVLLPAVGWMYWMGDSGWATLLLVWS-LIVGSLDNFLRPMLIKRGAD 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP L F G++GG+ + GL+G+F+GPV++A+ + I E Sbjct: 305 LPLLLIFAGVIGGMLSFGLIGIFVGPVVLAVTYTLTLAWIEDALGKDEP 353 >gi|296102735|ref|YP_003612881.1| putative inner membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057194|gb|ADF61932.1| putative inner membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 371 Score = 201 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 138/354 (38%), Gaps = 8/354 (2%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + +I+ L+ ++ F A + +WP+ Sbjct: 4 LRQPRDVAQILLSVLFLALMIIACLWIVQPFILGFAWAATVVVATWPVLLRLQKLLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMW 118 ++ T+ + LFI+P+ L + ++ + V + +P WL+ IP G Sbjct: 64 GLAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVI-RAVTSGDLTLPDLAWLNSIPVVGAK 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W L S + + A+ G + L ++F + Y Sbjct: 123 LYSGWHSLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLVFSAL----LY 178 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G ++ + L + + +R+ LG+ + A+ + ++ G ++GV Sbjct: 179 WRGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAVLGGIGLAISGV 238 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P V+ + + G + I+L G+ T L +W + +D +RP Sbjct: 239 PYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYWTGDTTWGTVLLVWSC-VVGTMDNVIRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 298 ILIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPPP 351 >gi|237747231|ref|ZP_04577711.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378582|gb|EEO28673.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 365 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 143/341 (41%), Gaps = 5/341 (1%) Query: 5 MLNPQGIMRWMIMFI---ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M P+ + I+F+ + + L F+ V I+ P+ F++K Sbjct: 1 MKQPEPHGKVFILFLSVVTVAFFWILLPFYGAVFWGFILAVMFMPLNDRFLAKIPGRKNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ + + I+PL+ + E L K++ + +++ Sbjct: 61 AALLTLSVCLLIVIIPLIVVIIALTQESAALYQKILTRSISFDASFQFIVSKLPDWAIDL 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L ++ + + L +I G LD+ +S M+ LFF RDG Sbjct: 121 LNHSGITTLAEFQQKISSGL-LQASQYIAGKLFVIGQNILDFAISFGLMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ ++ L L + VIR+T G ++AI +G + G +W G+ + Sbjct: 180 NELAARIRKLIP-LANEQKTLLLNKFTGVIRATVKGNLVVAIVQGALGGLIFWFLGIEAA 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I ++++++P G+ + + V+IY L G + L +G + + ++D LRP LV Sbjct: 239 LLWGAIMSVLSLLPAGSGVIWVPVAIYFLATGAVLKGVILLAFGVLVIGLIDNFLRPLLV 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G ++P +GG+ GL G IGPV+ AL W Sbjct: 299 GKDTQMPDYLVLVSTIGGMALFGLNGFVIGPVIAALFITAW 339 >gi|300715132|ref|YP_003739935.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060968|emb|CAX58075.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 369 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 135/333 (40%), Gaps = 6/333 (1%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+FI+ V+ L +++ VL A I+ P+ + + + V + Sbjct: 12 ILILFIVTVAFLDVLGPYYSSVLWAAILAVIFHPMKTKLRQMMGDRNGLATFATLVVICL 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL L +E + +K+ N Q + + +PG WA T+H Sbjct: 72 IVFTPLAILVSSMAIEFNVVYTKLQSNNMQLPTIMADVMQHLPG--WARSFLTEHQLDTA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G ++ G + + M+ LFF +DG + + Sbjct: 130 AQIQQKLSQVAMQGGQYLAGSVFLIGKSTFGFTVGFGIMLYLLFFLLKDGAYLVNLILEA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + V R+T G ++A+ +G + A+W+ G+ + G + A + Sbjct: 190 LP-LSSYVKHHLFMKFAAVSRATVKGTVVVAVVQGALGALAFWITGIDGILLWGALIAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP G+ I + +I+ G ++ + + + + +VD LRP LVG K+P Sbjct: 249 SLIPAVGSAIVWVPAAIFFFASGVLWKGLFIVGFFVVVIGLVDNILRPLLVGKDTKMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ G+ G IGP++ A+ W Sbjct: 309 LILIATLGGMEIYGINGFVIGPLIAAMFIACWN 341 >gi|183598849|ref|ZP_02960342.1| hypothetical protein PROSTU_02280 [Providencia stuartii ATCC 25827] gi|188021055|gb|EDU59095.1| hypothetical protein PROSTU_02280 [Providencia stuartii ATCC 25827] Length = 371 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 134/343 (39%), Gaps = 6/343 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I + L F + A ++ +WP+ ++ A++ ++ L Sbjct: 18 AFIILMIAACFWVLNPFILGFVWAGMMVIATWPLLLRLEARLWNKRWLAALVMVSLILLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++PL L + L+ N +P WL+ +P G W ++ + Sbjct: 78 FVIPLGILIGSIIQNSTPLIELAKSPNSLRLPDLEWLNSVPFVGEKIYYAWHSLVASGGN 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A G L ++F + Y G S+ + Sbjct: 138 ALLAKVQPYLGQAAGWFLAQAINAGRFMFHLALMLLFSGL----LYLKGESVMLGIRHFA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + +V G L+G+ L V+ I Sbjct: 194 VRLAGIRGDAAVVLAAQSIRAVALGVVVTALIQAIVGGVGLALSGISYAAILTVLLFICC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ A L +W A + +D LRP+L+ LP + Sbjct: 254 VAQLGPLLIMVPSVIWLFWTGDTTWAIILAVW-AAVVATMDGVLRPWLIKMGADLPMVLI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++GG+ + G++GLFIGPV++A+ + K + + E Sbjct: 313 LVGVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAIPNEN 355 >gi|294010794|ref|YP_003544254.1| putative permease [Sphingobium japonicum UT26S] gi|292674124|dbj|BAI95642.1| putative permease [Sphingobium japonicum UT26S] Length = 369 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 140/336 (41%), Gaps = 5/336 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ ++ + + ++ FFA +L +I P+ + A + + Sbjct: 14 GVFLGFVLIVSVAFALVIEPFFAAILWGVIAAILFAPVNQGLVGMMPRHRNSAAALTLLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L IVP + L + E +KV ++ + +P WA+ + Sbjct: 74 IVALVIVPAIILAMALVQEATLFYAKVQTGEINFARMFAQFQASLP--RWAAAFLERLGI 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T+ + A + G + +++ M+ FF RDG ++ + Sbjct: 132 TNFAAVREMLSEGITSSFRTVATQALQIGQSAFSFLMALGVMLYLTFFLLRDGPKLAAMV 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D AY + + + VIR+T G ++AI +G++ G +W G+P + GV+ Sbjct: 192 DRAAPMRT-AYRQALMQQFVIVIRATIKGSIVVAIVQGVIGGVVFWALGLPGALLWGVLM 250 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++IP G + + V+IYL + G + L G + +VD LRP LVG ++ Sbjct: 251 GAFSLIPAVGTGLVWVPVAIYLFVTGAVVEGLILAFCGMFVIGMVDNILRPILVGRDTRI 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ G G+ IGPV+ AL W Sbjct: 311 PDYVVLITTLGGIDLFGFNGIVIGPVIAALFIATWN 346 >gi|53804374|ref|YP_113737.1| hypothetical protein MCA1275 [Methylococcus capsulatus str. Bath] gi|53758135|gb|AAU92426.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 354 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 103/331 (31%), Positives = 169/331 (51%), Gaps = 7/331 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLF 80 + L GF P+ A+++ FT WP Y + +L + T+ +M L +VP F Sbjct: 24 GFWVLHGFIMPIAWAVVLAFTVWPWYEHVYQRAPCWMRGGWLPLAMTLLMMVLLMVPATF 83 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSET 139 E++ L ++ GI P WL +P G W E W++ +P+++ + Sbjct: 84 GVLVLGHEVQMLHRLLIKVQSSGIGAPDWLIQLPWVGGWIKETWSETFGNPETI----KN 139 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G+ + + L +S ++ALFF +RDG + +Q+ LF + Sbjct: 140 ALNALGMGTVFSYTRDLAAQVLHRFMSGFVTLLALFFIFRDGHGLGRQILDRSVRLFGSA 199 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +R +R T GM ++ IG+G+VLG YW G+ V LG +TA++A++P A Sbjct: 200 GARYARHAVTAVRGTVNGMLLVGIGKGVVLGLGYWAVGLSQPVLLGTLTAVVALVPFAAK 259 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + F A SIYL+++G+ L ++G I I D +RP L+GG +PFLPT G+ GG Sbjct: 260 LVFGAASIYLIVQGHAMAGIVLVVYGFIITLIADNYVRPTLIGGAANIPFLPTLLGIFGG 319 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 V MG +GLFIGP +MA++ +W++ + Sbjct: 320 VEAMGFVGLFIGPTVMAILISLWRDWNDETR 350 >gi|190410040|ref|YP_001965564.1| hypothetical protein [Sinorhizobium meliloti] gi|125631070|gb|ABN47071.1| hypothetical protein [Sinorhizobium meliloti SM11] Length = 347 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 142/311 (45%), Gaps = 7/311 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ F + +L A +I F++WP+Y + + A + T+ V + + P + Sbjct: 24 CALVLQPFLSAILWAAVICFSTWPVYQRCERAVGGNKSLAAAVMTLLVALVLVAPFAVMV 83 Query: 83 YYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETF 140 + L++ V + G P PRW++ +P G + W + + + Sbjct: 84 PTLTDNVSNLLTAVNQILEQGPPAPPRWVAGLPVIGENLAAYWESLAHNAPAFSTELKKL 143 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + G + L + + FFF+ G ++ + ++GE Sbjct: 144 IGPATNLAVAS-----GAVLGAGLLELGLSVFIAFFFFLHGRRMAAYVRAVGERFAGPRS 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +K+ +V ++ G+ A+ + ++ G +W+AGVP + LG +T +++ +P G P+ Sbjct: 199 RKLLTVVGATVKGVIYGLIGTALAQAVLAGIGFWIAGVPQALLLGFLTFVLSFVPIGPPL 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +V+++ ++G ++ + WG I + +D +RP+++G LP L FG +GGV Sbjct: 259 VWGSVALWFFVQGAVWWGLFVAAWGLILVSSIDNVIRPYVLGKTNNLPVLLGLFGFLGGV 318 Query: 321 RTMGLLGLFIG 331 G +G+F G Sbjct: 319 VAFGFIGIFWG 329 >gi|330828110|ref|YP_004391062.1| hypothetical protein B565_0410 [Aeromonas veronii B565] gi|328803246|gb|AEB48445.1| Putative membrane protein [Aeromonas veronii B565] Length = 361 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 139/339 (41%), Gaps = 6/339 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ F ++ A +I +WP+ T A+ T+ ++ + Sbjct: 16 LFLSILIISCFLVLQPFLPALVWATMITIATWPLMLMVQRLLWGKRTLAALFMTLVLLLM 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++PL + L+ +Q P WL IP G + W + L+ Sbjct: 76 FVIPLFMTLANVAEKAPMLIELGTHISQSPPPELLWLQQIPLVGDKLYDFWQQILASGGQ 135 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ A G++F+ + L++ + Y G ++ + Sbjct: 136 VLFAKLAPYFGQTARWLASQAGNLGLLFVHFLLTVGICGV----LYHSGEVVATGIRRFA 191 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + + IR+ +G+ + A+ + V G +AG+P + L V+ ++ Sbjct: 192 HRLAGQRGDNATVLASQAIRAVAMGVVVTALVQSSVAGVGLLIAGIPYAMVLVVVMFLLI 251 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G A YL G+ T L +W I +D LRPFL+ LP + Sbjct: 252 VAQIGPFPVLLACIGYLYWSGDTTWGTFLLVWSLIA-GTMDNFLRPFLIKRGADLPLILI 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G++GG+ TMG++GLFIGPV++A+ + I + Sbjct: 311 LVGVIGGLLTMGIIGLFIGPVVLAVGYTLLDAWIKEDDQ 349 >gi|148264677|ref|YP_001231383.1| hypothetical protein Gura_2633 [Geobacter uraniireducens Rf4] gi|146398177|gb|ABQ26810.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 365 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 7/339 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I + S + L+ FF ++ A +I T+WP+ + TV+++ + Sbjct: 18 LFIGILTAASFWILRPFFTALVWATMIVVTTWPLMLGVQKRLRGKRALAVTAMTVALLLV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 FIVP + E+V A P P W+ +P G + W + Q Sbjct: 78 FIVPFTLAIISIIERSDEIVGWSKSLATFTMPPPPEWVEQLPLAGPKLAARWHYLTTVGQ 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + ++ A GM+ + + L++I + + +G + + Sbjct: 138 AELSERLAPHAKEIVSWLVTRAGNVGMMIVQFLLTVIISAV----LFANGEKAASGICLF 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + K IR LG+ + A+ + L+ G +AG+P+ L V+ I+ Sbjct: 194 ARRLGDRNGEDAVILAAKAIRGVALGVVVTAVIQSLLAGIGLVVAGIPAPGLLTVVIFIL 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + V ++L T + +WG I + +D +RP L+ LP L Sbjct: 254 CVAQVGPGLVLIPVIVWLYWVDQALWGTAMIVWG-IIVGTIDNFIRPVLIKKGADLPLLL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F G++GG+ G++GLFIGPV++A+ + I + Sbjct: 313 IFAGVIGGLIAFGVIGLFIGPVMLAVTYTLLGAWITRGR 351 >gi|289164173|ref|YP_003454311.1| predicted permease [Legionella longbeachae NSW150] gi|288857346|emb|CBJ11174.1| putative predicted permease [Legionella longbeachae NSW150] Length = 359 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 101/338 (29%), Positives = 177/338 (52%), Gaps = 3/338 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + II +SL+ + F ++ A II ++P+Y + A++ T Sbjct: 6 KELISMGLTVGIIALSLFIIHRFIPSMIWASIIVIATYPLYERWRRFFGSKDDLSALLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + L ++PL +L + E++ ++ + N+ G P +L + P G W + Sbjct: 66 TLIGLLLLLPLSWLVGLLIKELQIFINFLQSLNEKGGMAPEFLKNFPWIGSDLVVYWDNN 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + P +K L + + + G + + F +++LFFFYRDG + Sbjct: 126 IGKPGMIKGLLSNIHLSLTPT--SYYVKQIGSNLAHRSVQVGFTLLSLFFFYRDGDRLIT 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ +GE+ W + + +PK +R+T G ++ +G G ++G Y L G P+ +G Sbjct: 184 QIYLVGENCLGKRWFRYADRLPKALRATVNGTIVVGLGVGFLMGVCYGLVGFPAPTLVGF 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ITA+ AMIP PI F V++ L G++F A + +WG + +F+ D ++P L+GG I+ Sbjct: 244 ITALAAMIPFVVPIVFITVAMILFAFGSMFGAIAVLVWGTLVMFVADHFIKPALIGGAIE 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LPFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 304 LPFLAVLFGILGGVETLGLLGLFVGPLVMVLFVTLWQE 341 >gi|148258479|ref|YP_001243064.1| hypothetical protein BBta_7289 [Bradyrhizobium sp. BTAi1] gi|146410652|gb|ABQ39158.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 353 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 150/338 (44%), Gaps = 3/338 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + L F+ +L +++ P+Y ++ + A + ++ L I+PL Sbjct: 18 LAFGWILWPFYGAILWSVVAAVVFAPLYRRLSQAMQQRHSLAAAATVMIIVTLVILPLTL 77 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L E + +V + + + D A L L+ ++ + Sbjct: 78 LSVTLAREASNVYGRVQSGELDLVRSFQQILDGLPDWMARVLDHFGLAILGGVQEKLSSV 137 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G F+ G + +++ M+ LFF +RD ++S+++ L P Sbjct: 138 LLK-GSQFLAAQTLDIGQRTFGFLVNLFVMLCLLFFLFRDENTLSKRVKD-AIPLRPERL 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + VIR+T G ++A+ G + G + L G+ + + V+ A ++++P G+ Sbjct: 196 DALLLKFTIVIRATVKGNLLVALLLGALGGLMFSLLGINASLLWAVLIAFLSLLPAIGSG 255 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V++YLL G I+ L ++GA+ + +VD LRP LVG K+P FF +GG Sbjct: 256 LVWVPVAVYLLATGAIWQGVVLIVYGALVIGLVDNLLRPMLVGKDTKMPDYVVFFSTLGG 315 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G+ G IGPV+ A+ W+ + + N + I+ Sbjct: 316 IEAFGINGFVIGPVIAAMFIAAWETFSVLRQRNDDAIA 353 >gi|89898842|ref|YP_521313.1| hypothetical protein Rfer_0020 [Rhodoferax ferrireducens T118] gi|89343579|gb|ABD67782.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 358 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 145/334 (43%), Gaps = 5/334 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + + + L F+ ++ II P+Y +++ + T A++ + V+ L Sbjct: 20 LMVAVSIALGWILLPFYGTIMWGAIIALLFTPVYRRLLARLKWRRTPAALLTLLLVLLLL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P L E ++ ++ + + +P W + L + Sbjct: 80 VLPFALLTAALAREAAQVYQQLQSGELNPSLYFQGLFDALP--DWLTALLDSFGLVNFAA 137 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 G F+ A G I ++ S+ + FF RDG S+++ L Sbjct: 138 LQRRLIAALAQGSQFLATQAMGIGQITFEFVTSLFITLYLAFFLIRDGDSVARALRHAVP 197 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L P + K++ VIR+T G ++A+ +G + G A+W GV + V+ A +++ Sbjct: 198 -LAPEHKKELIGKFTTVIRATVKGNLLVAVIQGALGGIAFWFLGVGGALLWAVLMAFLSL 256 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + + V+IY + G + L WG + + ++D LRP LVG ++P Sbjct: 257 LPAVGAGLVWLPVAIYFFLTGATWQGIALCAWGVLVIGLIDNLLRPILVGKDTRMPDYVV 316 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +GG+ G+ G IGP + A+ +W+ + Sbjct: 317 MITTLGGMVVFGINGFVIGPAIAAMFMAVWEIYV 350 >gi|295096092|emb|CBK85182.1| Predicted permease [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 371 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 138/354 (38%), Gaps = 8/354 (2%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + I I+ L+ ++ F A + +WP+ Sbjct: 4 LRQPRDVAQILLSVLFLAIMIIACLWIVRPFVLGFAWAATVVVATWPLLLRLQKLLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMW 118 ++ T+ + LFI+P+ L + ++ + V + +P WL+ IP G Sbjct: 64 GLAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVI-RAVTSGDMTLPDLAWLNSIPVVGAK 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W L S + + A+ G + L ++F + Y Sbjct: 123 LYSGWHSLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGRFMMHCTLMLVFSAL----LY 178 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G ++ + L + + +R+ LG+ + A+ + ++ G ++GV Sbjct: 179 WRGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAVLGGIGLAISGV 238 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P V+ + + G + I+L G+ T L +W + +D +RP Sbjct: 239 PYATIFTVVMLMTCLAQLGPLLVLVPCIIWLYWTGDTTWGTVLLVWSC-VVGTMDNVIRP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 298 LLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPPP 351 >gi|52840967|ref|YP_094766.1| transmembrane permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296757|ref|YP_123126.1| hypothetical protein lpp0796 [Legionella pneumophila str. Paris] gi|52628078|gb|AAU26819.1| transmembrane permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750542|emb|CAH11944.1| hypothetical protein lpp0796 [Legionella pneumophila str. Paris] Length = 350 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 101/338 (29%), Positives = 174/338 (51%), Gaps = 3/338 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + I++ SLY + F ++ A II ++P+Y+ + A + T Sbjct: 6 KELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + LF++PL +L + E + ++ + N+ G P + +IP G + W + Sbjct: 66 TLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVN 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + P ++K T + + G+ + F ++ LFFFYRDG + Sbjct: 126 IGKPGNIKEFLSNLHVTLTPT--SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLL 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G Sbjct: 184 QIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGVCYALVGFPAPTLTGF 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ITA+ AMIP P+ F V++ LL G++ + +WG + +F+ D ++P L+GG I+ Sbjct: 244 ITALAAMIPFVVPVVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQ 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LPFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 304 LPFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|330447452|ref|ZP_08311101.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491643|dbj|GAA05598.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 361 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ + V+ + ++ + P++ A II P++ ++ + A+++ Sbjct: 11 HWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSCF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK--- 125 + + ++PLL +F + + + + G P+ L P A K Sbjct: 71 ILTVIIVIPLLIVFSSIVHQGTTVSKESYEWITSGG--PKELFAHPYAQKALGFIDKYSP 128 Query: 126 -HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H PQ + T G + A G ++ + M+ LFF RD + Sbjct: 129 FHNFDPQVIIQKIATTASQVGSQALNISARILGDAT-SILVNFMMMLFVLFFLLRDNDKM 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + +I V +V +S LG + A+ +G+ G A WL G P + Sbjct: 188 IAAIRHVIP-LSRSQEDEIMNEVEQVAKSAVLGSFLTAVAQGIAGGFAMWLCGFPG-LFW 245 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + A ++IP G + + S+YLL+ G A L WG I + +D +RP L+ G Sbjct: 246 GSMMAFASLIPVVGTALIWLPASLYLLLIGQWEWALFLAGWGVIVVGSIDNVVRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG++ GL+G+ GP++ + V++K + K+ E+ N Sbjct: 306 SSSMNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMYEVEFKDFLEQQDKN 361 >gi|188584250|ref|YP_001927695.1| hypothetical protein Mpop_5064 [Methylobacterium populi BJ001] gi|179347748|gb|ACB83160.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 359 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 171/329 (51%), Gaps = 7/329 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 Y L GF ++ AL++ WP+++ + + + T V L ++P+ L Sbjct: 32 YILHGFLRALVWALVLAIALWPLFNRARRRFPPGRHNILWPAVFTGLVAGLLLLPIAGLA 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSETFL 141 E +L++ A ++GIPVP +++ +P G A +E W HL+H ++E Sbjct: 92 VEAGREAHDLLAYAREAERNGIPVPDFVAHLPYGAAAVTEWWNAHLAHAGLAHEVTERLN 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ D G + + F ++ALFF +R+G ++ Q + LF + Sbjct: 152 TTSNRDL----TRTLGAGLVHRVVLFGFCLLALFFLFREGDAVVAQSLRASQRLFGPRGE 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++R + + T G+ ++ IGEG +LG Y LAGVP V G +TA+ AMIP GAP++ Sbjct: 208 RVARQMVASVHGTVDGLVLVGIGEGFLLGIVYALAGVPHPVLFGALTAVAAMIPFGAPLA 267 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 268 FGLAAVLLLAGGAVVPAAIVVAAGFVITFVADHFVRPALIGGTTRLPFLWVLLGILGGVE 327 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 T GLLGLF+GP +MA + ++W+E + Sbjct: 328 TFGLLGLFVGPAVMAALILLWRELTEGPE 356 >gi|91782652|ref|YP_557858.1| hypothetical protein Bxe_A3174 [Burkholderia xenovorans LB400] gi|91686606|gb|ABE29806.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 371 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 152/355 (42%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMW 118 + A + + ++ + + P ++ + + ++V+ V + G+P +P W++ IP G Sbjct: 61 WAATLIVLIILIVVLGPFVYAGFAFGARVHDIVALVQRLFEAGLPDLPPWVARIPLVGSS 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + S L T G + + + I+ FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAAIA-----VTHGLGLLALSIVLAFFFY 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + L++ + + + ++ G+ A+ +G++ G W+AGV Sbjct: 176 TGGEGAAAWLNAGMRRVAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGV 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 236 PAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G +P + G++GG G LG+FIGP L+A+ + + + + Sbjct: 296 ILIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPAAR 350 >gi|317484069|ref|ZP_07943001.1| hypothetical protein HMPREF0179_00352 [Bilophila wadsworthia 3_1_6] gi|316924675|gb|EFV45829.1| hypothetical protein HMPREF0179_00352 [Bilophila wadsworthia 3_1_6] Length = 391 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 140/343 (40%), Gaps = 5/343 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + + L+ + FF + A IG P+Y + K A I + Sbjct: 12 AFLALLIGVTALFLWMMLPFFDVIFWAATIGILFHPVYRTIAEKWRMGRILSAFITILLC 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L I+PL ++ Y ++E L ++ + ++ I + W + + Sbjct: 72 LVLIIIPLSYILYNCVVEATLLYQRLHSDQNSFV---GYIDRIKDSYPFLQDWLHYAGYD 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 T + F+ R G L + ++ ++ FF DG I + L Sbjct: 129 LERIKSLLTKAALSASSFLARNTVTLGENTLGFLTNLALVLYIAFFLLMDGTKIQELLIK 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K + R +V R+T G ++A +G + G +WL + + + GV+ Sbjct: 189 ALP-FGDHREKLLFRKFAEVTRATVKGSLLVAAAQGALGGVIFWLLDIHAALLWGVVMTA 247 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A+IP GA + + V++YLL+ G+ ++ L +G+ + + D LRP LVG KLP Sbjct: 248 LALIPVVGAALVWGPVAVYLLLTGDYWDGGILLAYGSTVIGLADNILRPLLVGRDTKLPD 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GG G+ G GP L L +W+ I N Sbjct: 308 FLVLLSTLGGFVFFGMDGFVTGPTLAVLFVTVWQIFIAEFGAN 350 >gi|290509047|ref|ZP_06548418.1| inner membrane protein [Klebsiella sp. 1_1_55] gi|289778441|gb|EFD86438.1| inner membrane protein [Klebsiella sp. 1_1_55] Length = 370 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 7/336 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + II+ L+ ++ F A + +WP+ + T+ + L Sbjct: 18 LFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRLLFGKRMLAVLAMTLLLFLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + N +P WL+ +P G W L S Sbjct: 78 FVIPIALLVNSLVDNSVPLIKLISSGNVT-LPDFAWLNSVPLVGDKLYSAWHGLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + + L ++F + Y G ++ Sbjct: 137 AIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSAL----LYWRGEQVAYGFRYFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + +R+ LG+ + A+ + ++ G ++GVP L V+ Sbjct: 193 TRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAISGVPYAALLTVVMIFTC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G + I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSC-VVGTMDNVIRPVLIRMGADLPMILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 312 LTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 347 >gi|90580617|ref|ZP_01236422.1| putative permease [Vibrio angustum S14] gi|90438275|gb|EAS63461.1| putative permease [Photobacterium angustum S14] Length = 361 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 152/356 (42%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ + V+ + ++ + P++ A II P++ ++ + A+++ Sbjct: 11 HWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSCF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++PLL +F + + + + + + + + + Sbjct: 71 VLTVIIVIPLLVVFSSIVHQGTTVSKESYQWITSGGPKELFAHPYAQKVLF--YIDKYSP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H PQ + T G I A G ++ + M+ LFF RD + Sbjct: 129 FHDFDPQVIIQKIATTASQVGSQAINISARILGDAT-SILVNFMMMLFVLFFLLRDNDKM 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + I V +V +S LG + A+ +GL G A WL G P + Sbjct: 188 IAAIRHVIP-LSRSQEDAIMEEVEQVAKSAVLGSFLTAVAQGLAGGFAMWLCGFPG-LFW 245 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + A ++IP G + + S+YLL+ G A L WG + + +D +RP L+ G Sbjct: 246 GSMMAFASLIPVVGTALIWLPASLYLLLVGQWEWALFLAGWGVLVVGSIDNVVRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG++ GL+G+ GP++ + V++K + K+ E+ SN Sbjct: 306 SSSMNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMYEVEFKDFLEQQDSN 361 >gi|304309717|ref|YP_003809315.1| Predicted permease PerM family [gamma proteobacterium HdN1] gi|301795450|emb|CBL43648.1| Predicted permease PerM family [gamma proteobacterium HdN1] Length = 414 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 77/341 (22%), Positives = 144/341 (42%), Gaps = 8/341 (2%) Query: 13 RWMIMFIILVSL---YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R ++ +++VS + LK FF + A+ I P+ + ++ A++ + Sbjct: 10 RTFLLLLLIVSFSFMWLLKPFFGAIFWAVAIALIFSPVQRRLNQRWPSRNSGNAMLTLLL 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++P+LF+ + E L ++ L + EL+ + Sbjct: 70 CVVVLVLPMLFVVGSLVSEGAGLYQRINAGQFDPAHYLARLRE--AFPMVEELFRRANID 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 QSL+ L G + G L+ + + FFF RDG ++ QL Sbjct: 128 MQSLQEKLAE-LGMAGSKLLAGQVVALGQNTFSVVLNAVLALYVGFFFLRDGEQLTVQLI 186 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A + + V+R+T G ++A+ +G + G A+ G+ + G + Sbjct: 187 RALP-LGDARERLLLDRFAGVMRATIKGTLVVALVQGALGGLAFAALGISGALLWGGVMV 245 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I ++IP GA + + V++Y L G+ + L + G + +VD LRP LVG ++P Sbjct: 246 IASLIPAVGAALIWAPVAVYSLATGDWVSGVVLIVVGVGVIGMVDNLLRPILVGRDTQMP 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +GG+ G+ GL IGP++ AL W+ + Sbjct: 306 DYLVLLSTLGGLALFGMNGLIIGPIIAALFIAFWEIFMREF 346 >gi|206576471|ref|YP_002237996.1| inner membrane protein YdiK [Klebsiella pneumoniae 342] gi|288934905|ref|YP_003438964.1| hypothetical protein Kvar_2032 [Klebsiella variicola At-22] gi|206565529|gb|ACI07305.1| inner membrane protein YdiK [Klebsiella pneumoniae 342] gi|288889614|gb|ADC57932.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] Length = 370 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 7/336 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + II+ L+ ++ F A + +WP+ + T+ + L Sbjct: 18 LFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRMLAVLAMTLLLFLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + N +P WL+ +P G W L S Sbjct: 78 FVIPIALLVNSLVDNSVPLIKLISSGNVT-LPDFAWLNSVPLVGDKLYSAWHGLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + + L ++F + Y G ++ Sbjct: 137 AIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSAL----LYWRGEQVAYGFRYFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + +R+ LG+ + A+ + ++ G ++GVP L V+ Sbjct: 193 TRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAISGVPYAALLTVVMIFTC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G + I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSC-VVGTMDNVIRPVLIRMGADLPMILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 312 LTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 347 >gi|261343992|ref|ZP_05971637.1| putative membrane protein [Providencia rustigianii DSM 4541] gi|282568383|gb|EFB73918.1| putative membrane protein [Providencia rustigianii DSM 4541] Length = 371 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 7/359 (1%) Query: 2 RETMLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ M P+ ++ + I+F+I + L F + A ++ +WPI + Sbjct: 5 QKRMDLPKLVLGLLSIIFMIATCFWVLSPFILGFVWAGMMVIATWPIMLKLQVRLWNKRW 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 +V+ + + LF++P L + L+ +P WL+ IP G Sbjct: 65 LSSVVMVLLIFLLFVIPSSILIGSIIQNSAPLIELAKSPANITLPDLEWLNQIPMVGEKL 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ + + + A L ++F + Y Sbjct: 125 YYAWHSLVASGGNALLAKVQPYIGQAAGWFATQAISASRFLFHLMLMLLFSGL----LYY 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + IR+ LG+ + A+ + +V G L+G+ Sbjct: 181 KGELVTLGIRHFAVRLAGIRGDAAVVLAAQSIRAVALGVVVTALVQAIVGGIGLALSGIS 240 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ I + G + ++L G+ A L +W AI + +D LRP+ Sbjct: 241 YAAILTVLIFICCVAQIGPLLVMIPSVLWLFWTGDTTWAIILGVWAAI-VATMDGVLRPW 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ + G++GLFIGPV++A+ + K + + E + Sbjct: 300 LIKMGADLPMVLILIGVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAPPSESLDE 358 >gi|238919816|ref|YP_002933331.1| hypothetical protein NT01EI_1920 [Edwardsiella ictaluri 93-146] gi|238869385|gb|ACR69096.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 365 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 134/337 (39%), Gaps = 6/337 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ L+ ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 18 LFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLWGKRWMAVVLMTLLLLLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + ++ A +P WL +P + L L Sbjct: 78 FVLPIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLIGARLYASWQGLMSEGVL 137 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ FI A+ G FL L ++F + Y G ++ + Sbjct: 138 VTKIQPYIGQGITWFI-TQAAHVGGFFLHCSLMLLFSAL----LYSRGEDVAFGIRRFAI 192 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + ++ G ++G+ V L V+ I + Sbjct: 193 RLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYAVLLTVVMFICCL 252 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + +L G+ AT L +W + +D LRP L+ LP L Sbjct: 253 AQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSG-VVGTMDNVLRPALIRLGADLPMLLVL 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG+ G++GLFIGPV++A+ + I + Sbjct: 312 SGVIGGLLAFGMIGLFIGPVVLAVSYRLVSVWISEVP 348 >gi|157145970|ref|YP_001453289.1| putative inner membrane protein [Citrobacter koseri ATCC BAA-895] gi|157083175|gb|ABV12853.1| hypothetical protein CKO_01723 [Citrobacter koseri ATCC BAA-895] Length = 370 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 133/345 (38%), Gaps = 7/345 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVRPFVLGFAWAGTIVIATWPVLLRLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FI+P+ L + L+ V A +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-HAVTAGDMTLPDLAWLNSIPLIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCGLMLLFSAL----LYWRGEQVALGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 SRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAILGGIGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSC-VVGTLDNVIRPVLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSAWVHEVPAPGNDPD 356 >gi|168822229|ref|ZP_02834229.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197247934|ref|YP_002146674.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211637|gb|ACH49034.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205341339|gb|EDZ28103.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086155|emb|CBY95929.1| UPF0118 membrane protein BU123 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 372 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|205352916|ref|YP_002226717.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272697|emb|CAR37611.1| lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627989|gb|EGE34332.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 372 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP LP Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLPI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|189218730|ref|YP_001939371.1| Predicted permease, member of the PurR regulon [Methylacidiphilum infernorum V4] gi|189185588|gb|ACD82773.1| Predicted permease, member of the PurR regulon [Methylacidiphilum infernorum V4] Length = 350 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 174/346 (50%), Gaps = 7/346 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF-- 61 + + +L++++ L+GF + A +I +WP YS K ++ Sbjct: 6 PTPYQKTARVIASILFVLLAIWILRGFIVAMAWAFLIAIATWPFYSWVRMKLPRNTPLWV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 ++ T+ V L PL++ + E L + A + G P P W IP G W + Sbjct: 66 SSLFFTLLVGALLFGPLVYGVFKAGQEAIILGQYIAHAQKEGAPAPDWFQRIPFIGNWLT 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W +L+ P++ + L F+ R+ G+ + + F ++ LFF YRD Sbjct: 126 VRWNLNLATPEA----ASKTLAHIDSAFLFRWGKTIGVQVIHRIEVLAFTLLTLFFLYRD 181 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ + + +K ++ + VIR T G+ ++++GEG++LG AY + G+P Sbjct: 182 GRVLGKKFLAFIRKILGTPGEKYAQHLVLVIRGTVNGLVLVSLGEGILLGIAYAIVGLPD 241 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG +T I+AMIP AP F +++LL +G I A + ++G LF+ D +RP L Sbjct: 242 PVTLGGVTGILAMIPFAAPPVFCTAALFLLAQGMIIQAIAIVIFGFSVLFVADHFIRPAL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +GG + LPF G +GG+ + GLLGLF GP ++A + V WK+ + Sbjct: 302 IGGAVNLPFYWVLLGTLGGLSSFGLLGLFAGPTIIAALLVAWKDFV 347 >gi|152970708|ref|YP_001335817.1| putative inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895213|ref|YP_002919948.1| putative inner membrane protein [Klebsiella pneumoniae NTUH-K2044] gi|329999400|ref|ZP_08303408.1| hypothetical protein HMPREF9538_01066 [Klebsiella sp. MS 92-3] gi|150955557|gb|ABR77587.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547530|dbj|BAH63881.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538324|gb|EGF64461.1| hypothetical protein HMPREF9538_01066 [Klebsiella sp. MS 92-3] Length = 370 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 7/336 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + II+ L+ ++ F A + +WP+ + T+ + L Sbjct: 18 LFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLLAVLAMTLLLFLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + N +P WL+ +P G W L S Sbjct: 78 FVIPIALLVNSLVDNSVPLIKLISSGNVT-LPDFAWLNSVPLVGDKLYSAWHGLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + + L ++F + Y G ++ Sbjct: 137 AIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSAL----LYWRGEQVAYGFRYFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + +R+ LG+ + A+ + ++ G ++GVP L V+ Sbjct: 193 TRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPYAALLTVVMIFTC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G + I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSC-VVGTMDNVIRPVLIRMGADLPMILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 312 LTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 347 >gi|62179954|ref|YP_216371.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127587|gb|AAX65290.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714421|gb|EFZ05992.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 372 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + II+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIIIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|16764714|ref|NP_460329.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167551672|ref|ZP_02345426.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994384|ref|ZP_02575476.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168263810|ref|ZP_02685783.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463230|ref|ZP_02697161.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443331|ref|YP_002040620.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447864|ref|YP_002045370.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194734868|ref|YP_002114380.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197265600|ref|ZP_03165674.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241856|ref|YP_002215762.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389294|ref|ZP_03215905.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857130|ref|YP_002243781.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584124|ref|YP_002637922.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16419883|gb|AAL20288.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194401994|gb|ACF62216.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406168|gb|ACF66387.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710370|gb|ACF89591.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634155|gb|EDX52507.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243855|gb|EDY26475.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936372|gb|ACH73705.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601739|gb|EDZ00285.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323653|gb|EDZ11492.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327740|gb|EDZ14504.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205347570|gb|EDZ34201.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708933|emb|CAR33263.1| lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468651|gb|ACN46481.1| hypothetical protein SPC_2365 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246572|emb|CBG24382.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993250|gb|ACY88135.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157899|emb|CBW17394.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912349|dbj|BAJ36323.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223992|gb|EFX49055.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616748|gb|EFY13657.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619992|gb|EFY16865.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622303|gb|EFY19148.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627826|gb|EFY24616.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633075|gb|EFY29818.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636679|gb|EFY33382.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641296|gb|EFY37937.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647390|gb|EFY43882.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650226|gb|EFY46640.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655800|gb|EFY52102.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660126|gb|EFY56365.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665308|gb|EFY61496.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669565|gb|EFY65713.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673491|gb|EFY69593.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677419|gb|EFY73483.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679918|gb|EFY75957.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687390|gb|EFY83362.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129634|gb|ADX17064.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192507|gb|EFZ77737.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198638|gb|EFZ83739.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203119|gb|EFZ88150.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208684|gb|EFZ93622.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213802|gb|EFZ98580.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217661|gb|EGA02376.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219072|gb|EGA03577.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227199|gb|EGA11372.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229463|gb|EGA13586.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232686|gb|EGA16782.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240276|gb|EGA24320.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242736|gb|EGA26757.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245947|gb|EGA29935.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252809|gb|EGA36646.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256701|gb|EGA40430.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267143|gb|EGA50628.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271533|gb|EGA54954.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623509|gb|EGE29854.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 372 Score = 198 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|94495544|ref|ZP_01302124.1| hypothetical protein SKA58_05830 [Sphingomonas sp. SKA58] gi|94424932|gb|EAT09953.1| hypothetical protein SKA58_05830 [Sphingomonas sp. SKA58] Length = 370 Score = 198 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 147/354 (41%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ G ++ + + ++ FFA +L +I+ P++ ++ + Sbjct: 11 MHLSIKLEDGFFLGFVLLVSVAFALVIEPFFAAILWGVIVAIVFAPVHHRIRAQMPGRTN 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWA 119 A++ + ++ + IVP L + E KV + + + ++ +P + Sbjct: 71 AAALLTLLLILLVVIVPAFVLGAALLQEATYFYGKVQSGEINFVRLFYDVIAALPDWLRP 130 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + ++++ T+ + A + G + +++ M+ FF R Sbjct: 131 YVQRLGITNFYAAQEMVTRGL--TSSFRTLAGQAFQIGQSAFSFFVALGVMLYLAFFLLR 188 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +++++ + + V R+T G ++AI +GL+ G +W + Sbjct: 189 DGDWLARKVAAAAPLRAGQRTA-LIEQFVIVTRATIKGSIVVAIVQGLIGGLVFWALDIQ 247 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GV+ +++P G I + V+IYL G ++ L + GA+ + VD LRP Sbjct: 248 GALLWGVLMGAFSLLPAIGTAIVWVPVAIYLFATGAVWQGVVLVVCGALVIGSVDNVLRP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LVG ++P +GG+ G G+ IGPV+ AL W E+ Sbjct: 308 ILVGRDTRIPDYVVLISTLGGLELFGFNGIVIGPVIAALFIATWNIFTRMRGED 361 >gi|323525474|ref|YP_004227627.1| hypothetical protein BC1001_1122 [Burkholderia sp. CCGE1001] gi|323382476|gb|ADX54567.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 372 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 153/351 (43%), Gaps = 5/351 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ L + + ++ ++ SL L F +L I+ ++SW Y + Sbjct: 2 VKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGFYRRLTAAVGGRRK 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWA 119 + A + + ++ + + P ++ + + ++V+ V + G+P +P W++ IP + Sbjct: 62 WAATLIVLIILIVVLGPFVYAGFAFGAHVHDIVALVQRLFEAGLPDLPPWVARIPVVGSS 121 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A LSI+ FFFY Sbjct: 122 IESFWETLTSSNSELIAQLRTLAAPAGKWILSAAIAVTHGLGLLALSIVLA----FFFYT 177 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G L++ + + + ++ G+ A+ +G++ G W+AGVP Sbjct: 178 GGEGAGAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVP 237 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T +++IPGG I + +I+L G A L +WG + + + D ++P Sbjct: 238 APALLGLATFFLSVIPGGPVIVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+G +P + G++GG G LG+FIGP L+A+ + + + Sbjct: 298 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAP 348 >gi|168233553|ref|ZP_02658611.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472682|ref|ZP_03078666.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238910820|ref|ZP_04654657.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194459046|gb|EDX47885.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332357|gb|EDZ19121.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 372 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W AI + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAI-VGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|204927467|ref|ZP_03218668.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322809|gb|EDZ08005.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 372 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVYEVPAPTNEPEE 357 >gi|291616655|ref|YP_003519397.1| YdiK [Pantoea ananatis LMG 20103] gi|291151685|gb|ADD76269.1| YdiK [Pantoea ananatis LMG 20103] gi|327393082|dbj|BAK10504.1| permease YdiK [Pantoea ananatis AJ13355] Length = 397 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 133/336 (39%), Gaps = 5/336 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G ++ + L +F+ +L A ++ P+ K + + +++ V Sbjct: 9 GFFLLILAMATIAFFEVLAPYFSAILWAAVLAVIFHPLKRYLRGKLGDRNGLASLLTLVC 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + PL + ++E+ + K+ + Q + L +PG WA ++ Sbjct: 69 ICLIVFTPLAIIASSMVVEVNTVYHKLQTNSAQFPVVFADLLQHLPG--WAKHYLAENNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + G ++ A G + + M+ LFF +DG + + Sbjct: 127 DNATQIQQKLSAFALKGGQYLAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++ + +G++ G A+W G+ + G + Sbjct: 187 LEALP-LSTYVKHHLFMKFAAVSRATVKGTVVVGVVQGILGGLAFWFTGIDGSLLWGALM 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++++P G+ I + +I+ G ++ L + + + +VD LRP LVG K+ Sbjct: 246 GFLSLVPAVGSAIIWVPATIFFFATGALWKGLFLVGFFVVVVGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ G+ G IGPV+ AL W Sbjct: 306 PDYLILITTLGGMEIYGINGFVIGPVIAALFIACWN 341 >gi|269139133|ref|YP_003295834.1| predicted permease [Edwardsiella tarda EIB202] gi|267984794|gb|ACY84623.1| predicted permease [Edwardsiella tarda EIB202] gi|304559059|gb|ADM41723.1| Putative membrane protein [Edwardsiella tarda FL6-60] Length = 365 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 134/337 (39%), Gaps = 6/337 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ L+ ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 18 LFIALLIISCLWVVQPFILGFTWASMVVIATWPVLIWLQNHLWGKRWIAVVLMTLLLLLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + ++ A +P WL +P + L + L Sbjct: 78 FVLPIGMVITSLIGNAGPILDWAANARSWQMPQMEWLQTLPLIGAKLYASWQGLMNEGVL 137 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ FI A+ G FL L ++F + Y G ++ + Sbjct: 138 VTKIQPYIGQGITWFI-TQAAHVGGFFLHCSLMLLFSAL----LYSRGEDVAFGIRRFAI 192 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + ++ G ++G+ V L V+ I + Sbjct: 193 RLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYAVLLTVVMFICCL 252 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + +L G+ AT L +W + +D LRP L+ LP L Sbjct: 253 AQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSG-VVGTMDNVLRPALIRLGADLPMLLVL 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG+ G++GLFIGPV++A+ + I Sbjct: 312 SGVIGGLLAFGMIGLFIGPVVLAVSYRLVSVWISEAP 348 >gi|153217441|ref|ZP_01951183.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124113554|gb|EAY32374.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 361 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQTLFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRNFLDQQD 359 >gi|117620860|ref|YP_858434.1| hypothetical protein AHA_4000 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562267|gb|ABK39215.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 359 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 141/353 (39%), Gaps = 6/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ L + + +I+ L+ F ++ A +I +WP+ Sbjct: 1 MKKVDLAKITLGVLFLSLLIVSCFMVLRPFLPALVWATMITIATWPLMLMVQRLLWGKRA 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+ T+ ++ +F++PL + L+ + P WL +P G Sbjct: 61 LAALSMTLVLLLMFVIPLFMALANVAEKAPMLIELGTTISHSPPPELLWLQQVPLVGGKL 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W + L+ + ++ A G++F+ + L++ + Y Sbjct: 121 YDFWQQILASGGQVLFAKLAPYFGQTARWLASQAGNLGLLFVHFLLTVGICGL----LYH 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + + IR+ +G+ + A+ + V G +AG+P Sbjct: 177 SGEVVATGIRRFAHRLAGERGDNATVLASQAIRAVAMGVVVTALVQSSVAGLGLLIAGIP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ ++ + G A YL G+ T L +W + +D LRPF Sbjct: 237 YTMILVVVMFLLIVAQIGPFPVLLACVGYLYWSGDTTWGTFLLVWSLLA-GTMDNFLRPF 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ LP + G++GG+ MG++GLFIGPV++A+ + I + Sbjct: 296 LIKRGADLPLILILVGVIGGLLAMGIIGLFIGPVVLAVGYTLLDAWIKEDDQP 348 >gi|85059408|ref|YP_455110.1| putative inner membrane protein [Sodalis glossinidius str. 'morsitans'] gi|84779928|dbj|BAE74705.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 130/340 (38%), Gaps = 6/340 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I + L + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 18 TFIALMTLSCFWVVQPFILGFSWASMVVIATWPLLIKVQHLLWGRRSLAVVVMTLLLLLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + LV+ ++ +P WL DIP G W +S + Sbjct: 78 FVLPVSILVSSIVDNSAPLVAWATQPDRLTLPALAWLQDIPMVGRKLYSAWQSLISGGSA 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ + G + L L I+F ++ Y G + + Sbjct: 138 PLMSKIQPYIGKAASWLLGQVANLGSLLLHCGLMILFSVL----LYLRGERVGMAVRHFA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ +G+ + AI + ++ G + G+P L V ++ Sbjct: 194 IRLGAERGDASVLLAAQAIRAVAMGVVLTAIVQSVLGGVGLAITGIPLATVLTVTMFVLC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G I+L G+ T L +W + +D LRP + LP L Sbjct: 254 IAQLGPLPVLIPAMIWLYWSGDTTWGTILLVWSC-VVATLDNILRPIFIHMGADLPMLLV 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPV++A+ + + Sbjct: 313 LCGVLGGLLAFGMIGLFIGPVVLAVSWRLVFAWMQEAPPP 352 >gi|213581770|ref|ZP_03363596.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 370 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 16 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 76 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 134 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 135 AIMAKVRPYIGTTTIWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 190 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 191 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 250 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 251 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 309 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 310 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 355 >gi|325983330|ref|YP_004295732.1| hypothetical protein NAL212_2783 [Nitrosomonas sp. AL212] gi|325532849|gb|ADZ27570.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 362 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 80/342 (23%), Positives = 146/342 (42%), Gaps = 10/342 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +I +++ L F ++ A+++ ++WPIY ++T +++ V Sbjct: 9 QFARLVVIAILLIGCYQILHPFIPAIVFAMVVCISTWPIYLQLRRALGGNTTLASLLMIV 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPG-GMWASELWTKH 126 ++ L I+P L + + ++ V + Q G I P WL D P G W Sbjct: 69 GMILLVIIPSALLAFSLADNVTAIIDAVKVFMQQGSIEPPSWLKDTPFFGEQFIRYWQGL 128 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S + + L T ++ I F G + L ++F FFFYRDG ++ Q Sbjct: 129 MSGGKEV-----GMLLTGLLEPIKNFLLNLGNVIGKSLLQMVFAAFIGFFFYRDGETLIQ 183 Query: 187 QLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVA 243 L + L + + + G+ A+ + + + +AGV Sbjct: 184 MLHNGVAKLLDGSLGTDPLVQIHNTVTGVVYGIFGSALAQAIAAMIGFLIAGVSGSGAFL 243 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG T +++IP G + + VS++ L +G+ A LWG + +D +RP+L+ Sbjct: 244 LGSATFFLSVIPMGPSLVWGGVSVWFLYEGSYGWAIFTILWGIFVISSIDNFVRPYLISR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L FL G GG+ G +G+FIGP ++A+ + + Sbjct: 304 GSNLSFLLVVLGASGGIIAYGFIGIFIGPPILAIGITLVRLW 345 >gi|260752852|ref|YP_003225745.1| hypothetical protein Za10_0613 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856300|ref|YP_162388.2| hypothetical protein ZMO0653 [Zymomonas mobilis subsp. mobilis ZM4] gi|258552215|gb|ACV75161.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775296|gb|AAV89277.2| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ZM4] Length = 352 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 4/343 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVM 71 II + L+ ++ F+ ++ +++I WP++ +AT+++ Sbjct: 12 IFFAGIIGLGLWTIRHFWPALIWSIVIAIAFWPLWLKLKESMGSKHEKMLAPALATLAIG 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I+PLLF + M + + + P WL IP + L K Sbjct: 72 VTLILPLLFFAFEIMNDFQAAIHFFQDLKNQDTAPPDWLGRIPF--FGGNLVNKWHQFFA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S+ L + + FGM + F +++LFF +R G + + ++ Sbjct: 130 PSSDGSQISLHQLLNGNVINHSRAFGMNVARRITTFFFTLMSLFFLFRSGSELQKMFLNV 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L ++ + V +R T G+ ++ +GEG++LG Y G P V G +TAI Sbjct: 190 SRRLMGPDMERFAHQVVLSVRGTLDGLVLVGLGEGVLLGIIYVFTGTPHAVMFGGMTAIA 249 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP AP+ F V+ L +G+I A + G + L I D +RP L+GG +LPFL Sbjct: 250 AIIPFCAPVMFCIVAAILASQGHIGAAITVVALGMLILMIADHVVRPILIGGATRLPFLW 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++GG+ T GLLGLF+GP LMA++ +IW++ N++ Sbjct: 310 VLIGILGGIETFGLLGLFLGPALMAVLIMIWRDIADPPHLNED 352 >gi|16760543|ref|NP_456160.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141696|ref|NP_805038.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052909|ref|ZP_03345787.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213612364|ref|ZP_03370190.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646713|ref|ZP_03376766.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825924|ref|ZP_06545083.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25307060|pir||AH0703 probable membrane protein STY1759 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502839|emb|CAD02001.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137324|gb|AAO68887.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 372 Score = 196 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTIWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|262191799|ref|ZP_06049971.1| hypothetical protein VIH_002174 [Vibrio cholerae CT 5369-93] gi|262032333|gb|EEY50899.1| hypothetical protein VIH_002174 [Vibrio cholerae CT 5369-93] Length = 361 Score = 196 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 147/347 (42%), Gaps = 10/347 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ L + ++ + ++ A II +PI+ F K + A ++ V + + + Sbjct: 18 LLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIV 77 Query: 76 VPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +PLLF+F + + + L + V + W+ + G A+ PQ Sbjct: 78 IPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLANHYLPFEEISPQ 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + F T G + + A G + + M+ LFF RD I + + Sbjct: 136 QIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRDHDKIISAIRHI 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + ++ + V +S +G + AI +G+ G WLAG P + G + Sbjct: 195 LP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFA 252 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP G + + ++YL + G+ A L +W + +D LRPFL+ G + L Sbjct: 253 SFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTL 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 313 MIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|89072498|ref|ZP_01159070.1| putative permease [Photobacterium sp. SKA34] gi|89051602|gb|EAR57055.1| putative permease [Photobacterium sp. SKA34] Length = 361 Score = 196 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 151/356 (42%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ + V+ + ++ + P++ A II P++ ++ + A+++ Sbjct: 11 HWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSCF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++PLL +F + + + + + + + + Sbjct: 71 VLTVIIVIPLLVVFSSIVHQGTTVSKESYQWITSGGPKELFAHPYAQK--ALFYIDKYSP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H PQ + T G I A G ++ + M+ LFF RD + Sbjct: 129 FHDFDPQVIIQKIATTASQVGSQAINISARILGDAT-SILVNFMMMLFVLFFLLRDNDKM 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + I V +V +S LG + A+ +GL G A WL G P + Sbjct: 188 IAAIRHVIP-LSRSQEDAIMEEVEQVAKSAVLGSFLTAVAQGLAGGFAMWLCGFPG-LFW 245 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + A ++IP G + + S+YLL+ G A L WG I + +D +RP L+ G Sbjct: 246 GSMMAFASLIPVVGTALIWLPASLYLLLVGQWEWALFLAGWGIIVVGSIDNVVRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG++ GL+G+ GP++ + V++K + K+ E+ S+ Sbjct: 306 SSSMNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMYEVEFKDFLEQQDSH 361 >gi|258623083|ref|ZP_05718096.1| putative lipoprotein [Vibrio mimicus VM573] gi|258584696|gb|EEW09432.1| putative lipoprotein [Vibrio mimicus VM573] Length = 361 Score = 196 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 150/351 (42%), Gaps = 10/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWI--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + ++ M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFR 352 >gi|330816979|ref|YP_004360684.1| hypothetical protein bgla_1g20910 [Burkholderia gladioli BSR3] gi|327369372|gb|AEA60728.1| hypothetical protein bgla_1g20910 [Burkholderia gladioli BSR3] Length = 347 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 5/324 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L+ F + ALII + SWP++ S + A++ T V + +VP+L L Sbjct: 22 GILVLRPFLVSMTWALIIAYVSWPVHQRMQSLTNHRRSISALLTTSLVTVVLVVPILLLA 81 Query: 83 YYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 E E ++ + +PR S +P +W + + L Sbjct: 82 LPLSRESVEFAHRMAAWFSDRHHTLPRLASSVPW----LGVWLQAAADDIGRDARESRAL 137 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + A++ L F ++ LFF YRDG ++ QL + E L + Sbjct: 138 LAQWGNHAMGAAAQLAANAGRNALKFGFAVLTLFFVYRDGRTVLDQLRLVFEPLLGKRFD 197 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + +V + G + A +G G YW AGV + + L V+TA+ A+ P G P Sbjct: 198 VYLASIGEVCCAVAYGGVLTATAQGTAAGIGYWAAGVEAPLLLSVLTALAALFPFGTPFV 257 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V + LL+ G ++ L WG + + +D +RP L+ G ++PFL F ++GG+ Sbjct: 258 WVPVGLALLLDGRLWAGVSLLAWGTLAISGIDNLVRPLLISGGTRMPFLLAVFSILGGIA 317 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G +G F+GP+++A + +W+E Sbjct: 318 AFGFVGFFLGPIVVATLLAVWREW 341 >gi|121587957|ref|ZP_01677711.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121728275|ref|ZP_01681307.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673733|ref|YP_001216117.1| putative lipoprotein [Vibrio cholerae O395] gi|153801764|ref|ZP_01956350.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818917|ref|ZP_01971584.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|153822992|ref|ZP_01975659.1| lipoprotein, putative [Vibrio cholerae B33] gi|153825679|ref|ZP_01978346.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|227080805|ref|YP_002809356.1| hypothetical protein VCM66_0582 [Vibrio cholerae M66-2] gi|229505753|ref|ZP_04395263.1| hypothetical protein VCF_000964 [Vibrio cholerae BX 330286] gi|229509213|ref|ZP_04398698.1| hypothetical protein VCE_000613 [Vibrio cholerae B33] gi|229519577|ref|ZP_04409020.1| hypothetical protein VCC_003609 [Vibrio cholerae RC9] gi|229520915|ref|ZP_04410337.1| hypothetical protein VIF_001439 [Vibrio cholerae TM 11079-80] gi|229608864|ref|YP_002879512.1| hypothetical protein VCD_003786 [Vibrio cholerae MJ-1236] gi|254291239|ref|ZP_04962034.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254850857|ref|ZP_05240207.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744158|ref|ZP_05418111.1| predicted permease [Vibrio cholera CIRS 101] gi|262155732|ref|ZP_06028856.1| predicted permease [Vibrio cholerae INDRE 91/1] gi|262169926|ref|ZP_06037616.1| predicted permease [Vibrio cholerae RC27] gi|298500741|ref|ZP_07010544.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121547804|gb|EAX57892.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121629469|gb|EAX61896.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124122729|gb|EAY41472.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126510534|gb|EAZ73128.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|126519499|gb|EAZ76722.1| lipoprotein, putative [Vibrio cholerae B33] gi|146315616|gb|ABQ20155.1| putative lipoprotein [Vibrio cholerae O395] gi|149740616|gb|EDM54725.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|150422803|gb|EDN14755.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227008693|gb|ACP04905.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227012449|gb|ACP08659.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229342148|gb|EEO07144.1| hypothetical protein VIF_001439 [Vibrio cholerae TM 11079-80] gi|229344266|gb|EEO09241.1| hypothetical protein VCC_003609 [Vibrio cholerae RC9] gi|229353785|gb|EEO18721.1| hypothetical protein VCE_000613 [Vibrio cholerae B33] gi|229357976|gb|EEO22893.1| hypothetical protein VCF_000964 [Vibrio cholerae BX 330286] gi|229371519|gb|ACQ61942.1| hypothetical protein VCD_003786 [Vibrio cholerae MJ-1236] gi|254846562|gb|EET24976.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738098|gb|EET93490.1| predicted permease [Vibrio cholera CIRS 101] gi|262021660|gb|EEY40371.1| predicted permease [Vibrio cholerae RC27] gi|262030443|gb|EEY49083.1| predicted permease [Vibrio cholerae INDRE 91/1] gi|297540522|gb|EFH76580.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 361 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|296116208|ref|ZP_06834826.1| hypothetical protein GXY_10439 [Gluconacetobacter hansenii ATCC 23769] gi|295977314|gb|EFG84074.1| hypothetical protein GXY_10439 [Gluconacetobacter hansenii ATCC 23769] Length = 357 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 83/349 (23%), Positives = 157/349 (44%), Gaps = 11/349 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +M M+ I + L F + +L A I+ F++WPIY ++ + A+ Sbjct: 1 MVERIMMGLMLGGIAFGCILILYPFMSALLWAAILTFSTWPIYVRL--RRHTNPLIAALG 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR---WLSDIPG-GMWASE 121 TV + +VPL + G++E+ + + + + I +P WL IP G +E Sbjct: 59 MTVMSAVVMVVPLTLVVSSGIVELPQTLPDAIDSITTVIHLPSLPVWLQHIPHLGPQMNE 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W K ++ + + + M + + FFF+ G Sbjct: 119 TWEKWRVDVGNIDQMIRPYSGRLVQWALGGI-----MQLASGLAHLGMALFMAFFFWLGG 173 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ S+ + Y +I I+ + IR T G+ A+ +G++ G + +AG+ + Sbjct: 174 EALGATFVSVVRRIAGGYADRILGIIGRTIRGTVYGIIGTALLQGVLTGIGFAIAGIANP 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V G ITA ++++P GAP+ + + +L + + L L+G I + D +RP + Sbjct: 234 VLWGGITAFISVLPIGAPLIWIPAAFFLFVAHHPGWGVFLLLYGTIIVSGADHIMRPMFI 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +LP+L T G++GG+ T G LG+F+GPVL+ + + E Sbjct: 294 ARGAQLPYLLTVLGVLGGIWTFGGLGIFLGPVLIGVGYTLTAEFAAGDP 342 >gi|283833356|ref|ZP_06353097.1| putative membrane protein [Citrobacter youngae ATCC 29220] gi|291070999|gb|EFE09108.1| putative membrane protein [Citrobacter youngae ATCC 29220] Length = 366 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 132/346 (38%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WPI + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPILLRLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FI+P+ L + L+ V A +P WL++IP G W L S Sbjct: 78 FIIPIALLVNSIVDGSGPLI-HAVTAGDMTLPDLAWLNNIPLVGAKMYGAWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGATTTWFVGQAAHIGRFMMHCGLMLLFSAL----LYWRGEQVALGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G + GVP L V+ + Sbjct: 193 CRLASKRGDAAILLAAQAIRAVALGVVVTALVQAVLGGIGLAVTGVPYATLLAVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLVPAIIWLYWTGDSTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ ++ + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVVLAVSWRLFSAWVNEAPAPGSDPDE 357 >gi|237731304|ref|ZP_04561785.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906843|gb|EEH92761.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 369 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 131/345 (37%), Gaps = 7/345 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WPI + ++ T+ ++ L Sbjct: 18 LFLAILIVACLWIVQPFILGFAWAGTIVIATWPILLRLQKLLWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 FI+P+ L + L+ V A +P WL+ IP G W L S Sbjct: 78 FIIPIALLVNSIVDGSGPLI-HAVTAGDMTLPDLAWLNSIPLVGAKMYGAWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCGLMLLFSAL----LYWRGEQVALGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G + GVP L V+ + Sbjct: 193 CRLASKRGDAAILLAAQAIRAVALGVVVTALVQAVLGGIGLAVTGVPYATLLAVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDSTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++GG+ G++GLFIGPV++A+ ++ + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVVLAVSWRLFSAWVNEAPAPGTNPD 356 >gi|297580751|ref|ZP_06942677.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535167|gb|EFH74002.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 361 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIIQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|118578847|ref|YP_900097.1| hypothetical protein Ppro_0405 [Pelobacter propionicus DSM 2379] gi|118501557|gb|ABK98039.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 374 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 137/347 (39%), Gaps = 9/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I S + L+ F ++ A +I T+WP+ S + +++ L Sbjct: 18 LFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLWGKRALAVAAMSAALLLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIP--GGMWASELWTKHLSHP 130 ++PL + ++V A P P W+ +P G A T P Sbjct: 78 LVIPLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPVIGPKLAERWRTLATIDP 137 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L +K + + S + + + +I Y G + + Sbjct: 138 VELSARLAPHVKAIVGWIVAQTGS-----VMMMVVQFLLTVIISAVLYASGEKAAMGVRL 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + S + K IR LG+ + A+ + L+ G L+GVP+ L + I Sbjct: 193 FAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGVPAATLLTAVMFI 252 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + + G + I+L K + + +W A+ + +D +RP L+ LP L Sbjct: 253 LCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVW-AVVVGTMDNFIRPILIKKGADLPLL 311 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F G++GG+ G++GLFIGPV++A+ + +M + +E + Sbjct: 312 LIFAGVIGGLIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAA 358 >gi|226330354|ref|ZP_03805872.1| hypothetical protein PROPEN_04271 [Proteus penneri ATCC 35198] gi|225201149|gb|EEG83503.1| hypothetical protein PROPEN_04271 [Proteus penneri ATCC 35198] Length = 370 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 143/357 (40%), Gaps = 7/357 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 T + I F I+ S + L F + A +I +WP+ I K+ + Sbjct: 7 HTDIPKILFTVLFISFFIIASFWILNPFIVGFIWAGMIVVATWPLLL-IIEKRVKYRWLS 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 +I + ++ +F++P++ L + L+ + P WL+D+P G + Sbjct: 66 TMIMMILILLIFVIPIILLISSVIDNSAPLIELAKSPSNIQPPQLLWLNDVPMIGSSLYD 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L + I ++ A G + L + M++ + G Sbjct: 126 TWHSILVSGGNALISKIQPYVGQAANWFFAQALNIGR----FALHLGVMLLFSGLLFLQG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L L + IR+ LG+ + A+ + +V G ++GVP Sbjct: 182 ENVVSWLRHFAIRLAGQRGDAAILLASMSIRAVALGVVLTALIQAIVGGIGLAVSGVPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L VI I + G + ++L G+ + +WG + +D LRP+L+ Sbjct: 242 TVLTVIMFICCLAQIGPLLVLIPSVLWLFWTGDTTWGIVMVIWGG-AVATMDGVLRPYLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ T+G++GLFIGPV++A+ + I + + ++ Sbjct: 301 KMGADLPMVLILTGVIGGILTLGMIGLFIGPVVLAVAHSLLNAWINEVPKPNPDLTE 357 >gi|262163961|ref|ZP_06031700.1| predicted permease [Vibrio mimicus VM223] gi|262027489|gb|EEY46155.1| predicted permease [Vibrio mimicus VM223] Length = 361 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 150/351 (42%), Gaps = 10/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWI--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + ++ M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFR 352 >gi|229512886|ref|ZP_04402353.1| hypothetical protein VCB_000528 [Vibrio cholerae TMA 21] gi|229350135|gb|EEO15088.1| hypothetical protein VCB_000528 [Vibrio cholerae TMA 21] Length = 361 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIESVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|120611907|ref|YP_971585.1| hypothetical protein Aave_3249 [Acidovorax citrulli AAC00-1] gi|120590371|gb|ABM33811.1| protein of unknown function UPF0118 [Acidovorax citrulli AAC00-1] Length = 350 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 146/343 (42%), Gaps = 5/343 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T L +++ + L L L F V +I+ P++ + + Sbjct: 2 KTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASE 121 A+ + + I+P+ + + E + ++ + ++ +P WA + Sbjct: 62 ALCTLTLCLLVVILPVTLITVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMP--SWAMQ 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S + + F+ A FG L + +S M+ LFF RDG Sbjct: 120 ILDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQFVVSFGIMLYLLFFLLRDG 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ ++ L + ++++ VIR+T G +A +G + G A+W + + Sbjct: 180 PALAARIRE-ATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQAP 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V GV+ A ++++P GA + + V++YLL G ++ L +G + +VD LRP L Sbjct: 239 VLWGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPVL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VG K+P +GG+ GL G IGPV+ AL W Sbjct: 299 VGKDTKMPDYVVLISTLGGMSLFGLTGFVIGPVIAALFIATWD 341 >gi|262172300|ref|ZP_06039978.1| predicted permease [Vibrio mimicus MB-451] gi|261893376|gb|EEY39362.1| predicted permease [Vibrio mimicus MB-451] Length = 361 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 149/351 (42%), Gaps = 10/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWI--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + ++ M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGETTWAIFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFR 352 >gi|153829135|ref|ZP_01981802.1| putative lipoprotein [Vibrio cholerae 623-39] gi|148875393|gb|EDL73528.1| putative lipoprotein [Vibrio cholerae 623-39] Length = 361 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|15640644|ref|NP_230273.1| hypothetical protein VC0624 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|9655058|gb|AAF93790.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 361 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 150/358 (41%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLL +F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLLIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|241761186|ref|ZP_04759275.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374805|gb|EER64266.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 352 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 4/333 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVM 71 II + L+ ++ F+ ++ +++I WP++ +AT+++ Sbjct: 12 IFFAGIIGLGLWTIRHFWPALIWSIVIAIAFWPLWLKLKESMGSKHEKILAPALATLAIG 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I+PLLF + M + + + P WL IP + L K Sbjct: 72 VTLILPLLFFAFEIMNDFQAAIHFFQDLKNQDTAPPDWLGRIPF--FGGNLVNKWHQFFA 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S+ L + + FGM + F +++LFF +R G + + ++ Sbjct: 130 PSSDGSQISLHQLLNGNVINHSRAFGMNVARRITTFFFTLMSLFFLFRSGSELQKMFLNV 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L ++ + V +R T G+ ++ +GEG++LG Y G P V G +TAI Sbjct: 190 SRRLMGPDMERFAHQVVLSVRGTLDGLVLVGLGEGVLLGIIYVFTGTPHAVMFGGMTAIA 249 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP AP+ F V+ L +G+I A + G + L I D +RP L+GG +LPFL Sbjct: 250 AIIPFCAPVMFCIVAAILASQGHIGAAITVVALGMLILMIADHVVRPILIGGATRLPFLW 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G++GG+ T GLLGLF+GP LMA++ +IW++ Sbjct: 310 VLIGILGGIETFGLLGLFLGPALMAVLIMIWRD 342 >gi|229530430|ref|ZP_04419818.1| hypothetical protein VCG_003550 [Vibrio cholerae 12129(1)] gi|229332203|gb|EEN97691.1| hypothetical protein VCG_003550 [Vibrio cholerae 12129(1)] gi|327483427|gb|AEA77834.1| Predicted permease [Vibrio cholerae LMA3894-4] Length = 361 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 152/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDTIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|320539515|ref|ZP_08039182.1| putative inner membrane protein [Serratia symbiotica str. Tucson] gi|320030368|gb|EFW12380.1| putative inner membrane protein [Serratia symbiotica str. Tucson] Length = 366 Score = 195 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 141/347 (40%), Gaps = 8/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ S + ++ F + A ++ +WP+ + + T+ ++ L Sbjct: 18 LFIATMIIASFWVIQPFILSLAWAAMVVIATWPLLIKLQKLLWGRRSLAVMAMTLLLILL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 FI+P+ + + +++ + +P WL +P G + + Sbjct: 78 FILPISLMIGSLVDNSGPVIAWASTLGKLHMPEFVWLQSLPMFGDKIYNSYHALVNAGGA 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + F+ + A+ G + L L ++F +I Y G ++ + Sbjct: 138 ALLAKMQPYFGQTATWFVAQ-AAHIGRLLLHCTLMLLFSVI----LYARGEQVALGIRHF 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + IR+ LG+ + A+ + ++ G L+G+P+ L V+ I Sbjct: 193 AVRLGAERGDAAVLLGGQAIRAVALGVVVTALVQSVLGGIGLALSGIPAATWLTVLIFIC 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I+L G+ AT L +W + +D LRP L+ LP L Sbjct: 253 CVAQLGPLLVLVPAIIWLYWSGDTTWATVLVIWSC-VVATLDNVLRPMLIRMGADLPTLL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ GL+GLFIGPV++A+ + + + + Sbjct: 312 ILLGVIGGLLAFGLIGLFIGPVVLAVSYRLLTAWMDEAAKPTTTLQD 358 >gi|161614223|ref|YP_001588188.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363587|gb|ABX67355.1| hypothetical protein SPAB_01967 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 360 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 135/346 (39%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 6 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 65 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 66 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 124 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 125 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 181 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 240 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 241 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 299 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 345 >gi|78222370|ref|YP_384117.1| hypothetical protein Gmet_1154 [Geobacter metallireducens GS-15] gi|78193625|gb|ABB31392.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 358 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 149/344 (43%), Gaps = 3/344 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + V + F + A +IG ++PIY + T A + T + + +V Sbjct: 16 AILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTLAAGLMTPATVLTLVV 75 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 P + L ++ + E + +A G + + + P + Sbjct: 76 PFVGLTFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWIARIEAYTGPLGFEID 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + ++ M+I LFF YRDG + + ++ L Sbjct: 136 TRFLPEMKEVAARVLNYSKEIVKNVFIFSIKLLLMVITLFFIYRDGERVQRHALAVIP-L 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A + ++ V +V+++ G+ + + +G + G +W AG+PS + G I A+ A+IP Sbjct: 195 TEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSPLLFGAIMAVCALIP 254 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + + +IYLL G + L +WG + + +D +RPF + G KLP L Sbjct: 255 VVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFFISGRAKLPVLVIAI 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ + GLLG GP+++AL +++ ++ + + +S Sbjct: 315 GGLGGLASFGLLGAVAGPIVLALFLALFEMYRDEVETGEGRGNS 358 >gi|149926550|ref|ZP_01914811.1| hypothetical protein LMED105_14163 [Limnobacter sp. MED105] gi|149824913|gb|EDM84127.1| hypothetical protein LMED105_14163 [Limnobacter sp. MED105] Length = 359 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 108/357 (30%), Positives = 174/357 (48%), Gaps = 3/357 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M E + P+ ++ + +ILV L F +L A II WP++ + Sbjct: 1 MAEHLRQPKSLISTLFTVLILVGAAIVLSPFLLAILWAGIIATAFWPLHCRIRGRFPGKP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMW 118 A + T+ V L + P++ L + + ++ E+ + + A+ G+ VP WL IP G Sbjct: 61 NGAAFLTTLVVAFLLVGPMIGLIVFMVQDILEITTFLRQADDSGVAVPDWLPQIPVLGEM 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W ++LS P+ + L L D + AS + L ++ F + LFFFY Sbjct: 121 LVASWQEYLSVPKQISGLLRETLTQRLGD-VQGTASAILLELLGRVATLFFALWVLFFFY 179 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG SIS +++ +G WK +P +R+ G+ I++ E ++L + GV Sbjct: 180 RDGSSISIRMNRIGTDWLGQRWKPYVSHMPPALRAAVNGLVIVSFAEAVILSVLFAACGV 239 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + V LG ITA++A IP AP + + L + G+ A L G + + I D +RP Sbjct: 240 YAPVLLGTITALIAFIPMAAPGLLAILGMILFLSGHGAEAIVLITVGMLVVLIADYLVRP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ G LPFL FG+ GGV TMG++GL IGPVL+ L+ V + E+ A + + Sbjct: 300 LLIQGGTHLPFLAVLFGVFGGVITMGIVGLIIGPVLLVLLVVFFDEASHAHHHDTPE 356 >gi|330821380|ref|YP_004350242.1| hypothetical protein bgla_2g22990 [Burkholderia gladioli BSR3] gi|327373375|gb|AEA64730.1| hypothetical protein bgla_2g22990 [Burkholderia gladioli BSR3] Length = 356 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 171/338 (50%), Gaps = 8/338 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVM 71 + ++ ++L+ ++ F V A +I WP + T ++++ T +V Sbjct: 23 VLYTALVALALWVIREFLPAVAWAGVIAIALWPALRRIDEVPWLSGRHTVVSIVLTSAVG 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHP 130 L +VP+ ++ E+ + A +GIPVP +S +P G S W +L+ P Sbjct: 83 LLLVVPVAVAVVQAAGQVHEVFAWARDARLNGIPVPDAVSHLPFGAQQVSTWWQANLAQP 142 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T +K + + FG + + FM++ LF +R G +IS L Sbjct: 143 ----LHAPTGVKAMNSEAFVSYGKAFGSRVVHAAVLFGFMLVTLFVIFRAGPNISASLMR 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + F A + + + I T G+ ++ +GEG +LG AY AGVP LG++TA+ Sbjct: 199 GVQRAFGANGASLIQRMASAIYGTVTGLVVVGLGEGALLGIAYAFAGVPHAALLGLVTAV 258 Query: 251 MAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 AM+P API F +I+L + +G A L ++G + +F+ + +RP L+GG +LPF Sbjct: 259 AAMLPFCAPIVFCGAAIWLFLVQGATGWAIGLAVFGFVVVFVAEHFVRPVLIGGSARLPF 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L FG++GG T GLLGLFIGP LM ++ V+W E I Sbjct: 319 LLVLFGILGGAETFGLLGLFIGPALMTVLTVLWTEWIH 356 >gi|254226734|ref|ZP_04920310.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125620751|gb|EAZ49109.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 361 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 151/358 (42%), Gaps = 10/358 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + + M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGIWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G+ A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359 >gi|304415417|ref|ZP_07396069.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] gi|304282733|gb|EFL91244.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] Length = 353 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 144/337 (42%), Gaps = 8/337 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +++ S ++ F + A+++ T+WP+ ++ T+ ++ Sbjct: 19 LFILTMMITSFLVIQPFIIGLTWAVMVVITTWPLLIKLQIVLWGRRVLAVIVMTLLLILF 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELWTKHLSHPQ 131 F++P+ L ++ LV+ P WL+ IP G + Sbjct: 79 FVIPIALLVNSLLINSAPLVAWASSPANMHFPEMEWLNAIPLIGSKIYNSWHNLVEGGAN 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L ++ F+ + A+ G + L ++F ++ FY G ++Q + Sbjct: 139 ELLAKLRPYVGEATTWFVAQ-AAHLGRFVVHLALMVLFSVL----FYFHGERVAQGIRRF 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + + IR+ LG+ + A+ + ++ G A +AG+P L V+ I+ Sbjct: 194 AVRLADEKGDSVIVLAAQSIRAVALGLVVTALIQAVLGGIALAMAGIPYATLLTVLMFIL 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ G + I+L G+ + L +W I L D LRP L+ LP + Sbjct: 254 CVVQLGPLLVLIPAIIWLYWSGDTTWGSILLVWSGI-LGTFDAVLRPALIRRGADLPMIL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 FG++GG+ ++G++GLFIGPV++A+ + I Sbjct: 313 ILFGVIGGLLSLGMIGLFIGPVVLAVSYRLILAWINE 349 >gi|283785082|ref|YP_003364947.1| putative outer membrane protein [Citrobacter rodentium ICC168] gi|282948536|emb|CBG88126.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 370 Score = 193 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 132/346 (38%), Gaps = 7/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLRLQKLLWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL+ IP G W L + Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNSIPLVGAKLYAGWHNLLDMGGA 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYLGATTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAFGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAILLAAQAIRAVALGVVVTALVQAVLGGIGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLVPAIIWLYWSGETTWGTVLLVWSC-VVGTLDNVIRPVLIRMGADLPLILI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + ++ Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEAPSPTDEPEQ 357 >gi|295699388|ref|YP_003607281.1| hypothetical protein BC1002_3752 [Burkholderia sp. CCGE1002] gi|295438601|gb|ADG17770.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 98/347 (28%), Positives = 175/347 (50%), Gaps = 7/347 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESST 60 E + + + ++L++L+ ++ F V A ++ WP+ S +T Sbjct: 21 ERQKKQRAASVALYIGLVLLALWVVRDFIVVVAWAAVVAIALWPLLHKVASSPWFRGRTT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWA 119 LA + T+ + L ++P+ + E +L A ++GIP+P +++ +P G Sbjct: 81 LLATVFTLVIAVLVLLPVGLGLAQALREAHDLNDWFRSAQENGIPLPDFINRLPFGVQQI 140 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S W +L+ P + +K + + FG + FM++ LF ++ Sbjct: 141 SSWWQANLAQP----LRGSAAMKGLHSETVMTLGRHFGARAAHAAMVFAFMLVTLFVIFQ 196 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +S L F + + +R T G+ ++ +GEGL+LG AY++ GVP Sbjct: 197 AGPRLSGSLLKAARRGFGDSGADLVAHMGTAVRGTVSGLIVVGVGEGLLLGVAYFVTGVP 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG +TAI AM+P API F +++LL++G++ A L ++GA+ +F+ + +RP Sbjct: 257 HAALLGFVTAIAAMLPFCAPIVFGLAALWLLVQGSMVAAAGLLVFGAVVVFVAEHFVRPV 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L+G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 317 LIGNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLV 363 >gi|83858202|ref|ZP_00951724.1| hypothetical protein OA2633_01846 [Oceanicaulis alexandrii HTCC2633] gi|83853025|gb|EAP90877.1| hypothetical protein OA2633_01846 [Oceanicaulis alexandrii HTCC2633] Length = 380 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 12/352 (3%) Query: 5 MLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q + R I+ + L + ++ ++GF +P+ A + P++ SS+ Sbjct: 20 MSDRQALQRVFIVLLALGVSVIFIWMIRGFLSPLFMAAVFAMFLNPVHRFLKPITFGSSS 79 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--LSDIPGGMW 118 A + V + + ++PL + + ++ V Q I + R + +P + Sbjct: 80 AAAGLVLVLAVFVVLIPLTAILALVADQAVQVTGTVAPWLQDQIRLIREGGIEALPDWLP 139 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E L+ Q +N ++ + L ++ M+ ALFFF Sbjct: 140 FRE----SLAPYQQDITNQAAQFASNAGGWLVDGLRKATSGTFGAFLDLVVMLFALFFFL 195 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G S+++ L + + IR+T G +IAI +G++ G A LAGV Sbjct: 196 TRGPSLAEHGLKLMP-MPREDRDLLVERAMSTIRATVKGTFVIAIIQGVLTGIALALAGV 254 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + +T ++++IPG G P+ + I+L+ G+ L WGA+ + ++D LR Sbjct: 255 PGALFWATVTTVLSVIPGIGPPLVWGPAGIWLIASGHYVAGGLLIAWGALVVGLIDNLLR 314 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P LVG KLP L +GG+ G +G+ +GP++ AL + IW ++ Sbjct: 315 PRLVGQDAKLPDLMILISTLGGLTLFGAVGIIVGPMIAALFSSIWYLYALSY 366 >gi|258592868|emb|CBE69177.1| conserved membrane protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 378 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 137/326 (42%), Gaps = 7/326 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F +P+ A+I+ P+Y + + S A++ T++V+ ++P + + Sbjct: 39 IIVPFASPIFWAVILVVVFQPVYRRLLHRLGGKSGLAALLLTIAVIAAVMIPAILSGWVL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT-- 143 E Q ++ P M LW + L L Sbjct: 99 TQEAVSFYQAAERVYQQEG--LAGIASHPAVMAGRVLWDRVSLPFTRLGFDLNALLLGGL 156 Query: 144 -NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI + L + +++ + FF RDG +I L + L + + Sbjct: 157 GAVSSFIVDNLKGIAINLLSFTVNLFLAVFTFFFLLRDGEAIVYSLQRILP-LERKHAEA 215 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + + + + + G + A+ +G++ G YW GVP V LG+ TA+ +++P GG+ + Sbjct: 216 LFSRLYEAVSAVVRGTIVTALAQGILGGVGYWAVGVPYPVFLGLATALFSLLPVGGSAVI 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL ++G L W + + D L+P L+ G LP L FFG++GG++ Sbjct: 276 WIPAAFYLFLEGGWIRGLLLLAWSTVVVSTADNVLKPALISGGTNLPTLFLFFGMLGGLQ 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 G+LG +GPVL+ ++ + Sbjct: 336 VFGILGFILGPVLLVTLSTFLEIYTA 361 >gi|254563916|ref|YP_003071011.1| hypothetical protein METDI5602 [Methylobacterium extorquens DM4] gi|254271194|emb|CAX27206.1| Conserved hypothetical protein, putative inner membrane protein, putative permease [Methylobacterium extorquens DM4] Length = 359 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 7/331 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVSVMCLFIVPLLFLF 82 Y L GF ++ A+++ WP+ + + + + T V + ++P+ L Sbjct: 32 YILSGFLRALVWAVVLAIALWPLLNRAHRRFPPGRHNILWPAVFTGLVALVLLLPIGVLA 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSETFL 141 E +L++ A ++GIPVP +++ +P G A +E W HL+H LSE Sbjct: 92 VEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSERLN 151 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ D G + + F ++ALFF +R+G ++ Q LF + Sbjct: 152 TTSNRDL----TRSLGAGLVHRVVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRGE 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP++ Sbjct: 208 RVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPLA 267 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F + LL G A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 268 FGLAAALLLAGGAAVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGVE 327 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T GLLGLF+GP +MA + ++W+E +E Sbjct: 328 TFGLLGLFVGPAVMAALILLWREFTEGSQEP 358 >gi|330994579|ref|ZP_08318502.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758220|gb|EGG74741.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 390 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 89/360 (24%), Positives = 165/360 (45%), Gaps = 10/360 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +M+ + +M M+ I + L F +L A I+ F++WP++ ++ S A Sbjct: 31 SMMVERIMMGLMLGGIAFGCVLILYPFMTALLWAAILTFSTWPVFMRL--RRGMSLLPAA 88 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPG-GMWAS 120 ++ T+ + +VPL+ + + ++ + +V A H P+P ++ IP G + Sbjct: 89 MVMTLLCALVLVVPLVIVVSNSIADVPATLQYIVDAVGTLHLPPLPARVAHIPHFGPEIA 148 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + W K S+ + + I + M + + FFF+ Sbjct: 149 DKWQKWSEDVGSIDQVVRPYAGR-----IGQSVLSAMMQLASGMAHLAMALFISFFFWLG 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ + Y +I IV + IR T G+ AI +G++ G + +AG+ S Sbjct: 204 GDGLGTTFVAVVRRIAGVYADRILGIVGRTIRGTVYGILGTAIIQGILTGIGFAIAGISS 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG ITA +A++P GAP+ + +++LL+ + L L+G I + D +RP Sbjct: 264 PVLLGAITAFVAVLPIGAPLIWIPAAVFLLLTHHPGWGIFLLLYGTIIVSGADHIIRPMF 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + +LP+L T G++GGV T G LG+F+GPVL+ + + E + I + Sbjct: 324 IARGAQLPYLLTVLGVLGGVLTFGGLGIFLGPVLIGVGYTLTAEFAAGDPRSNNPIPDDL 383 >gi|289807066|ref|ZP_06537695.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 355 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 136/349 (38%), Gaps = 7/349 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +I+ L+ ++ F A I +WP+ + ++ T+ + Sbjct: 2 AIGAFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLL 61 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSH 129 + LF++P+ L + L+ V +P WL++IP G W L Sbjct: 62 VLLFVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDM 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + A+ G + L ++F + Y G ++ + Sbjct: 121 GGSAIMAKVRPYIGTTTIWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIR 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ Sbjct: 177 HFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMI 236 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++ G I+L G+ T L +W A + +D +RP L+ LP Sbjct: 237 LSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPL 295 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 296 LLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 344 >gi|261212265|ref|ZP_05926551.1| predicted permease [Vibrio sp. RC341] gi|260838873|gb|EEX65524.1| predicted permease [Vibrio sp. RC341] Length = 361 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 79/360 (21%), Positives = 151/360 (41%), Gaps = 10/360 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ K A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHDWLDRKLPSHHNISAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V + + ++PLLF+F + + + + HG + L P + A L Sbjct: 67 LSCVVLTVIVVIPLLFIFGAIVQQGSKFSQNLYSWVTHGG--IQELLSHPWVVKALGLAN 124 Query: 125 KHLSH----PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++L PQ + F T G + + A G + ++ M+ LFF RD Sbjct: 125 QYLPFEEISPQQIAQRVAQFATTFGSNLVSISAKILGDAT-SFVMNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +G G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLIGETTWAFFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDQS 361 >gi|71909670|ref|YP_287257.1| hypothetical protein Daro_4061 [Dechloromonas aromatica RCB] gi|71849291|gb|AAZ48787.1| Protein of unknown function UPF0118 [Dechloromonas aromatica RCB] Length = 351 Score = 191 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 9/338 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCL 73 +++ +I+ + L F VL A ++ +W Y + + T A + T++++ + Sbjct: 15 LVVLLIIGCITVLLPFIGAVLFAFVVWMCTWRFYAEKLLPRLGGRDTLGASLMTLALVLV 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPG-GMWASELWTKHLSHP 130 ++P++FL L+ + + G+P P WLS +P G W + S+ Sbjct: 75 TLLPMIFLAGSLANGTDNLIDFIKPYVEQGLPANPPAWLSALPFFGTEIDSTWHRLASNR 134 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + +F G I + L + ++ FF YRDG +IS L Sbjct: 135 EELNATVRQLVAPA-----RQFVLALGGIAANGLLQLALVLFVTFFLYRDGAAISHALYV 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + LG+ A +G V + +AGVP + LG T Sbjct: 190 GARKLGGDLGENMLDKARGTVVGVMLGIVGTAAAQGTVAMIGFLIAGVPQAMLLGFATFF 249 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++MIP G P+ + + +L G A + ++G + +D ++P L+ L L Sbjct: 250 LSMIPVGPPLIWGGAAAWLYSDGQTGWAIFMVIYGLFGISSIDNFVKPILIAYGAGLSIL 309 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++GGV G +G+F+GPVL+AL ++ + I Sbjct: 310 LIALGVLGGVLVFGFIGIFLGPVLLALGDMLLQRWIRE 347 >gi|262401678|ref|ZP_06078244.1| predicted permease [Vibrio sp. RC586] gi|262352095|gb|EEZ01225.1| predicted permease [Vibrio sp. RC586] Length = 361 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 78/360 (21%), Positives = 152/360 (42%), Gaps = 10/360 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI++ K A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHAWLDKKLPSHHNLSAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIVVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQEVLNHPWV--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + ++ M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGTNLVSISAKILGDAT-SFVMNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G A L +W + +D LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLIGETSWAIFLAIWSIAVVGSIDNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ ++ Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDNS 361 >gi|268592592|ref|ZP_06126813.1| putative membrane protein [Providencia rettgeri DSM 1131] gi|291312006|gb|EFE52459.1| putative membrane protein [Providencia rettgeri DSM 1131] Length = 371 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 135/344 (39%), Gaps = 6/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +I + L F + A ++ +WP+ ++ ++ + ++ LF+ Sbjct: 20 IVLMIAACFWVLNPFILGFVWAGMMVIATWPLLLRLEARLWHKRWLATLVMVLLILLLFV 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +PL L + L+ + +P WL+ IP G W ++ + Sbjct: 80 IPLGILIGSIIENSTPLIDLAKSPSSLTLPDLEWLNTIPMVGEKIYYAWHSLVASGGNAL 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A G L ++F + Y G S+ + Sbjct: 140 LAKIQPYFGQAAGWFATQAISAGRFVFHLMLMLLFSGL----LYLKGESVMVSIRHFAVR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ + +V G L+G+ L V+ I + Sbjct: 196 LAGIRGDAAVVLAAQSIRAVALGVVVTALIQAIVGGIGLALSGIGYAAILTVLLFICCVA 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + I+L G+ L +W A + +D LRP+L+ LP + Sbjct: 256 QLGPLLIMVPSVIWLFWTGDTTWGIILAIW-AAVVATMDGVLRPWLIKMGADLPMVLILV 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + K + + E ++ Sbjct: 315 GVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAVPSEDLTE 358 >gi|258405391|ref|YP_003198133.1| hypothetical protein Dret_1267 [Desulfohalobium retbaense DSM 5692] gi|257797618|gb|ACV68555.1| protein of unknown function UPF0118 [Desulfohalobium retbaense DSM 5692] Length = 371 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 8/357 (2%) Query: 7 NPQGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 Q R ++ VS L+ +KGF+ PV +++ P+Y + + Sbjct: 7 TDQAQKRAFVLLTAGVSAGFLWLVKGFWQPVFWGILLAIVFQPLYRQVLRLCHGRQRLGS 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VI S++ ++PL L M E L +V L+ + I P L + L Sbjct: 67 VITVSSIVLGVVLPLFVLALAVMQESLSLYQQV-LSGKIDIQQPVRLVEQSLPQLVDGLE 125 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + +ILS+T L+ F+ R G + + + M+ L+FF++DG Sbjct: 126 RIGIDFDRLREILSQTALR--ASQFLANHLFRIGQSTVQVLIQTLIMLYLLYFFFKDGQG 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I L L + + +V R+T G +I I +G + G +W+ G+ + Sbjct: 184 IVNVLVRTIP-LGDRRERLLFNRFAEVARATIKGTLVIGIVQGGIGGGLFWILGLQGALL 242 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV+ +++++P G+ + + I L+ G L G++ + + D LRP LVG Sbjct: 243 WGVLMVLLSILPVVGSALVWGPAGIILIATGAYLKGGILLATGSVVIGLADNILRPALVG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP +GG+ GL G IGPV+ AL +W+ + + Sbjct: 303 RETRLPDYLILLATLGGLAVYGLAGFVIGPVVAALFLTVWEMFGLEFGKGDVAAEEE 359 >gi|288940576|ref|YP_003442816.1| hypothetical protein Alvin_0838 [Allochromatium vinosum DSM 180] gi|288895948|gb|ADC61784.1| protein of unknown function UPF0118 [Allochromatium vinosum DSM 180] Length = 401 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 157/353 (44%), Gaps = 6/353 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + M + I + L ++ F +L A I + P+Y ++ S + +++ + Sbjct: 8 KATVILMTLAISALFLAMIQPFLMTLLLAGIFSALARPLYLRLQARLGCSESIASLLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++P +FL + + ++ + + + I P +D + + + + Sbjct: 68 LIAVMVLIPSVFLITILIGQALDVSELISIWVRGVIEDP---TDFLAALQHLPFYDEVIE 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H + L + T + + S + +++ ++ +LFF DG +L Sbjct: 125 H-RGLILEQAGQAATLVSKLLVDWVSSVTLKTVNFVFLTFVLLYSLFFLLMDGPKFILKL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V R+T G +I + +G + G A+ +AG+ + V G + Sbjct: 184 LYYLP-LHTRDERLMLDKFTSVTRATLKGSFLIGVLQGGLAGIAFAVAGIDNAVFWGTLM 242 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A++++IP GA + + I L+ +G + A L L+ + + +D LRP LVG ++ Sbjct: 243 ALLSIIPNVGAALVWIPAVIILIAQGAVLTAILLALFCGLIVGSLDNVLRPILVGKDTRM 302 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L FF +GG+ GL GLFIGPV+ +L+ IW+ + + ++ + Sbjct: 303 HELMIFFSTLGGLLMFGLPGLFIGPVIASLLISIWEIYGVEFADVLPEVDESL 355 >gi|198282946|ref|YP_002219267.1| hypothetical protein Lferr_0810 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666280|ref|YP_002425149.1| hypothetical protein AFE_0661 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247467|gb|ACH83060.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518493|gb|ACK79079.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 351 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 10/343 (2%) Query: 13 RWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + ++ L F + A I+ + +WP+ A AT+ + Sbjct: 17 QLLAAVLFFALVWKILSPFLPALGWAAILVYATWPLAGPMRRHWP--PVPAAAGATLMLA 74 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +FI+P++FL E+ +++ + + H + L+ IP L P Sbjct: 75 LIFILPVIFLSISLGTELHHVLTDLGSVDAHTT-LEASLNRIPW------LHELLAQIPA 127 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + K T + + +I ++I FFFYR G + QL Sbjct: 128 AWKTKLMPGALTPDLSAWAGRLGSVAGGIGRFGTLLILVLITAFFFYRHGEVLVDQLRRF 187 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + R V IR+ G+ A+ +G + G YW+AG+P+ V L ++T + Sbjct: 188 VGQVLGQRGDAYLRTVASTIRAVIYGILATAVAQGALAGLGYWVAGLPAPVLLAIVTLLF 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP G P+ + A SI+LL +G I+ L LWG + + +D +RP ++ +++PFL Sbjct: 248 SFIPFGTPLVWGAASIWLLSQGEIWAGVGLALWGTLVVSWIDNLIRPLVISNAVRIPFLL 307 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FG++GG+ G LGLF+GPVL+A++ IW E + + Sbjct: 308 VLFGVLGGILAFGFLGLFLGPVLLAVLLAIWSEWLRPAPAAPQ 350 >gi|34497807|ref|NP_902022.1| hypothetical protein CV_2352 [Chromobacterium violaceum ATCC 12472] gi|34103663|gb|AAQ60024.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 364 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 137/342 (40%), Gaps = 7/342 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ +++ L L+ F + A II ++WP+YS + A++ +++ Sbjct: 20 AILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLRLRGRHKLAALLIVLALSAA 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG-GMWASELWTKHLSHPQ 131 +P+ + + L + +P P WL+++P G +LW + Sbjct: 80 LAIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNLPVVGDSLQKLWQSTQADLP 139 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G L I+ I +G + ++ + Sbjct: 140 GFFEKVRPAINQAALWLLSG-----GANLGLSLLEIVLAIAVAGLLLINGDKLWDLVERI 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + ++ + IRS G+ A+ + ++ +AGVP + LG + I+ Sbjct: 195 VVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAGVPGALVLGFLCFIV 254 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+ + + + ++ G+ L +WG + + +D L+P L+ ++P Sbjct: 255 AVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILKPLLISQGAQMPLSV 314 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F G++GG+ G++GLFIGP L+A+ + + + + Sbjct: 315 IFLGVIGGLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEE 356 >gi|260771194|ref|ZP_05880121.1| predicted permease [Vibrio furnissii CIP 102972] gi|260613791|gb|EEX38983.1| predicted permease [Vibrio furnissii CIP 102972] gi|315179200|gb|ADT86114.1| Predicted permease [Vibrio furnissii NCTC 11218] Length = 361 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 147/352 (41%), Gaps = 14/352 (3%) Query: 8 PQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 W+++ +L +K + ++ A II +PI+ +K + Sbjct: 6 KISSSHWVLIVALLAAAFTCYLLVKPYVNSIVMAFIISLLMFPIHEKLEAKLPSHKNLAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + + + ++PLLF+F + + + + V + W+ + G A Sbjct: 66 LLSCIILTFIIVIPLLFVFGAIVQQGSKFSQNVYQWVTHGGIQTVFNHPWV--VKGLSLA 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + PQ + + G + + A G ++ ++ + M+ LFF R Sbjct: 124 NHYLPFDEIQPQQIAQKVGQLATSFGSNLVGISAKILGDAT-NFIMNFLLMLFVLFFLLR 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + L + K+ + +V +S +G + AI +G G W+AG P Sbjct: 183 DHDKIITAIRHILP-LSRSQEDKLLSEIEQVSKSAVMGSFLTAIAQGAAGGFGMWMAGFP 241 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G + + IP G + + +IYL + G+ A L +W + +D LRP Sbjct: 242 G-LFWGTMMGFASFIPLVGTALIWIPATIYLFLIGDTTWAIFLGVWSVAVVGSIDNLLRP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ K Sbjct: 301 LLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFK 352 >gi|56413662|ref|YP_150737.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362586|ref|YP_002142223.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127919|gb|AAV77425.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094063|emb|CAR59563.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 372 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 134/338 (39%), Gaps = 7/338 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVP 349 >gi|193211909|ref|YP_001997862.1| hypothetical protein Cpar_0235 [Chlorobaculum parvum NCIB 8327] gi|193085386|gb|ACF10662.1| protein of unknown function UPF0118 [Chlorobaculum parvum NCIB 8327] Length = 368 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 149/346 (43%), Gaps = 6/346 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + I + L ++ F +L A I ++P++S F+S E + A++ Sbjct: 10 NKIVVLVAALLISALFLAMIRHFLVTILLAGIFAGLAYPLFSRFLSLSGERRSLSAILTL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +PL+ +F + + L V+ + + P L + G+ + Sbjct: 70 TIFFLIVFMPLVAVFSIVVGQAISLSKTVIPLVRDQLQDPEALPSLISGLP---FYHDIE 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L G I F++ D L I +FF RDG ++ + Sbjct: 127 KYSDLILGRIAEVLGNLGTTVISSFSAFTWSALYDIAL-FIIFWYTMFFLLRDGHTLMAK 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + L K++ V R++ G IIA+ +G + G A+ +AG+ + V G I Sbjct: 186 IQNYLP-LAENDQKRLLDRFVSVTRASLKGSLIIAVVQGSLAGLAFHVAGIENAVFWGAI 244 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++P G+P+ + I GN A L L+ +I + +D +RP LVG Sbjct: 245 MAMLSILPLIGSPLIWVPAVIIQAFSGNYVEAIGLLLFCSIVVGQIDNVMRPILVGRDTS 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L FFG +GG+ GL G IGPV+ AL +W E Sbjct: 305 MHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWDIYGETFSEP 350 >gi|258625580|ref|ZP_05720466.1| putative lipoprotein [Vibrio mimicus VM603] gi|258582133|gb|EEW06996.1| putative lipoprotein [Vibrio mimicus VM603] Length = 361 Score = 190 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 148/351 (42%), Gaps = 10/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 7 LASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAAF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + ++PLLF+F + + + L + V + W+ + G A+ Sbjct: 67 LSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWI--VKGLSLAN 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 PQ + F T G + + A G + ++ M+ LFF RD Sbjct: 125 HYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 184 HDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + IP G + + ++YL + G A L +W + + LRPF Sbjct: 243 -LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGETTWAIFLAIWSIAVVGSIYNLLRPF 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G + L FF L+GG++ GL+GL GP++ A+ V++ + Sbjct: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFR 352 >gi|320155419|ref|YP_004187798.1| putative permease [Vibrio vulnificus MO6-24/O] gi|319930731|gb|ADV85595.1| predicted permease [Vibrio vulnificus MO6-24/O] Length = 361 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 146/352 (41%), Gaps = 14/352 (3%) Query: 8 PQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 W+++ +L ++ + ++ A II +PI+ F SK + + Sbjct: 6 KISSSHWVLIVALLAAGTACYLLVEPYINSIIMAFIISLLMFPIHDWFESKMPKHRNMAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ V + + +VPLLF+F + + V + W+ + G Sbjct: 66 LLSCVVLTFIIVVPLLFVFAAIVQQGSVFSQNTYQWVTHGGIQQVLGHPWI--VKGLKLV 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E +S+ + G + + A G ++ + M+ LFF R Sbjct: 124 NEYLPFDNIDAKSIAEKIGQLATSFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLR 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + L + K+ + V +S +G + AI +G+ G WLAG P Sbjct: 183 DHDKIISAIRHILP-LSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFP 241 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G + + IP G + + +IYL + G+ A L +W + +D LRP Sbjct: 242 G-LFWGTMMGFASFIPVVGTALIWIPATIYLFLTGDTGWAIFLAIWSIAIVGSIDNLLRP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FL+ G + L FF L+GG++ GL+GL GP++ A+ V++ K Sbjct: 301 FLMQGSAGMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFK 352 >gi|170742961|ref|YP_001771616.1| hypothetical protein M446_4853 [Methylobacterium sp. 4-46] gi|168197235|gb|ACA19182.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 361 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 97/349 (27%), Positives = 167/349 (47%), Gaps = 6/349 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESST 60 RE +++ + V L+ L F ++ A+I+ WP+Y+ + + Sbjct: 11 REPDSFHAAARVALVLGLAAVGLWTLHEFLPALVWAVILAIALWPLYARIAGRHRAGRTI 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWA 119 + T+ + +VPL L E ++++ + G PVP +++ +P G Sbjct: 71 LWPALFTLGAALVVLVPLAVLAVQAAREARDVLHFWRQIEEQGWPVPDFVARLPFGASQV 130 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W LSHP S L + FG + + F ++ LFF +R Sbjct: 131 ASWWQDTLSHPAG----SSELLHRLDRSSLLGVGRSFGGQIVHRAMLFGFTLLTLFFLFR 186 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +++ Q + LF ++++ + + T G+ ++ +GEG++LG Y AGVP Sbjct: 187 DGPALAGQALAACRRLFGPRGERVAHQMAASVHGTVDGLVLVGLGEGVLLGIVYAFAGVP 246 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LG TA+ AMIP AP+ F + +G++ A + + G + F+ D +RP Sbjct: 247 HPVLLGAFTALAAMIPFAAPVVFALAAALAAAQGSLVAAAVVVVAGFVVTFVADHFVRPA 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+GG +LPFL G++GGV T GLLGLF+GP +MA + ++W+E Sbjct: 307 LIGGATRLPFLWVLLGILGGVETFGLLGLFLGPAIMAALVLLWREYTEG 355 >gi|161503539|ref|YP_001570651.1| putative inner membrane protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864886|gb|ABX21509.1| hypothetical protein SARI_01616 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 372 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 133/338 (39%), Gaps = 7/338 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL+ IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPNLAWLNTIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W A + +D +RP L+ LP L Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLI 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 312 LSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVP 349 >gi|149190146|ref|ZP_01868422.1| predicted permease [Vibrio shilonii AK1] gi|148836035|gb|EDL52996.1| predicted permease [Vibrio shilonii AK1] Length = 357 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 146/346 (42%), Gaps = 10/346 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++F ++ + ++ A I+ +PI+ SK + +A+++ + + Sbjct: 9 VLILALLFAAFACYLLVEPYMNSIVMAFILSLLMFPIHEWIESKMPKHKNVVALLSCIVL 68 Query: 71 MCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++PLL +F + + + + V + W+ G + ++ Sbjct: 69 TFIIVMPLLLVFSAIVQQGSVFSQNMYQWVTGGGIQEVIAHPWVKK--GLSFINDYLPFD 126 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + Q + + F + G + + A G ++ ++ M+ LFF RD I Sbjct: 127 AINAQDIAQKAAEFATSLGSNLVATSAKILGDAT-NFLMNFFLMLFVLFFLLRDHDKIIA 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + ++ + KV +S +G + AI +G G W+AG P + G Sbjct: 186 AIRHILP-FSRSQEDRLLNEIEKVSKSAVMGSFLTAIAQGAAGGFGMWMAGFPG-LFWGT 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YLLI G+ L +W + +D LRP L+ G Sbjct: 244 MMGFASFIPVVGTALIWIPATAYLLITGDTTWGLFLAVWSIAVVGSIDNVLRPLLMQGSA 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L FF L+GG+ GL+GL GP++ A+ V++ K+ Sbjct: 304 GMNTLMIFFSLLGGIHLFGLIGLIYGPLIFAITMVLFNMYEEEFKD 349 >gi|27365038|ref|NP_760566.1| putative permease [Vibrio vulnificus CMCP6] gi|27361184|gb|AAO10093.1| Predicted permease [Vibrio vulnificus CMCP6] Length = 361 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 146/352 (41%), Gaps = 14/352 (3%) Query: 8 PQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 W+++ +L ++ + ++ A II +PI+ F SK + + Sbjct: 6 KISSSHWVLIVALLAAGTACYLLVEPYINSIIMAFIISLLMFPIHDWFESKMPKHRNMAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ V + + +VPLLF+F + + V + W+ + G Sbjct: 66 LLSCVVLTFIIVVPLLFVFAAIVQQGSVFSQNTYQWVTHGGIQQVLGHPWI--VKGLKLV 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E +S+ + G + + A G ++ + M+ LFF R Sbjct: 124 NEYLPFDNIDAKSIAEKIGQLATSFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLR 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + L + K+ + V +S +G + AI +G+ G WLAG P Sbjct: 183 DHDKIISAIRHILP-LSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFP 241 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G + + IP G + + +IYL + G+ A L +W + +D LRP Sbjct: 242 G-LFWGTMMGFASFIPVVGTALIWIPATIYLFLTGDTGWAIFLAIWSIAIVGSIDNLLRP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FL+ G + L FF L+GG++ GL+GL GP++ A+ V++ K Sbjct: 301 FLMQGSGGMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFK 352 >gi|319941451|ref|ZP_08015779.1| hypothetical protein HMPREF9464_00998 [Sutterella wadsworthensis 3_1_45B] gi|319805071|gb|EFW01901.1| hypothetical protein HMPREF9464_00998 [Sutterella wadsworthensis 3_1_45B] Length = 383 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 6/337 (1%) Query: 11 IMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+R + M ++ V Y L+ F +L A ++ +WP+++ S +SST A + +S Sbjct: 24 IIRIVFMVVVAVGCYLVLEPFLTAILIAAVLAVVTWPVFNKLRSGMRQSSTAAASVMVLS 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L ++PL FL ++ V + +P+ + + IP Sbjct: 84 IVVLVLIPLSFLLVALAQQVPRGVQAAAAWLKDPLPILQAVQSIPYAGDWLYGELVSAID 143 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 PQ+ + L+ + + + + F+ +FFFYRDG + ++ Sbjct: 144 PQTFAHTMQRILEPLSTWVL-----NAAVNVGSGVMQLAFVTFIVFFFYRDGSWFADRIS 198 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ E + ++I++I+ RS G+ AIG+GLV G +W+AGVP + L Sbjct: 199 AVVERVSGGIAEEITKILVNTTRSVVFGIVGTAIGQGLVAGIGFWIAGVPGVLILSFAVC 258 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++++IP G P+ + +++L KG + A L LWG + + VD ++P L+ +P Sbjct: 259 VLSVIPIGPPLIWLPAAVWLWSKGELGMAAFLVLWGTLAVSSVDNFIKPLLIARGTSMPI 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F G+ GGV G LGL +GP+L+A+ ++ + Sbjct: 319 ALIFLGVFGGVLAFGFLGLILGPLLLAVGIALFSAWL 355 >gi|37680914|ref|NP_935523.1| permease [Vibrio vulnificus YJ016] gi|37199664|dbj|BAC95494.1| predicted permease [Vibrio vulnificus YJ016] Length = 361 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 14/352 (3%) Query: 8 PQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 W+++ +L ++ + ++ A II +PI+ F SK + + Sbjct: 6 KISSSHWVLIVALLAAGTACYLLVEPYINSIIMAFIISLLMFPIHDWFESKMPKHRNMAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ V + + +VPLLF+F + + V + W+ + G Sbjct: 66 LLSCVVLTFIIVVPLLFVFAAIVQQGSVFSQNTYQWVTHGGIQQVLGHPWI--VKGLKLV 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E +S+ + G + + A G ++ + M+ LFF R Sbjct: 124 NEYLPFDNIDAKSIAEKIGQLATSFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLR 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + L + K+ + V +S +G + AI +G+ G WLAG P Sbjct: 183 DHDKIISAIRHILP-LSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFP 241 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G + + IP G + + +IYLL+ G+ A L +W + +D LRP Sbjct: 242 G-LFWGTMMGFASFIPVVGTALIWIPATIYLLLTGDTGWAIFLAIWSIAIVGSIDNLLRP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FL+ G + L FF L+GG++ GL+GL GP++ A+ V++ K Sbjct: 301 FLMQGSAGMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFK 352 >gi|307294633|ref|ZP_07574475.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306879107|gb|EFN10325.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 369 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 140/336 (41%), Gaps = 5/336 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ ++ + + ++ FFA +L +I P+ + + A + + Sbjct: 14 GVFLGFVLIVSIAFALVIEPFFAAILWGVIAAILFAPVNQALLDMMPRRRNSSAALTLLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWASELWTKHLS 128 ++ L IVP L + E +KV + + ++ + +PG WA+ + Sbjct: 74 IIALVIVPAFILAMALVQEATIFTAKVQSGEINFARIFAQFQASLPG--WAAAFLERLGI 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A + G + +++ M+ FF RDG ++ + Sbjct: 132 TNFAAVREMLSEGIASSFRTVATQALQIGQSAFSFLMALGVMLYLTFFLLRDGPLLAAMV 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D Y + + R V R+T G ++AI +G++ G +W G+P + GV+ Sbjct: 192 DRAAPMRT-TYRQALMRQFVIVTRATIKGSIVVAIVQGVIGGMVFWALGLPGALLWGVLM 250 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++IP G + + V+IYL + G + L G + +VD LRP LVG ++ Sbjct: 251 GAFSLIPAVGTGLVWVPVAIYLFVTGAVVEGLILAFCGMFVIGMVDNILRPVLVGRDTRI 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ G G+ IGPV+ AL W Sbjct: 311 PDYVVLITTLGGIDLFGFNGIVIGPVIAALFIATWN 346 >gi|326386386|ref|ZP_08208009.1| hypothetical protein Y88_2280 [Novosphingobium nitrogenifigens DSM 19370] gi|326209047|gb|EGD59841.1| hypothetical protein Y88_2280 [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 91/344 (26%), Positives = 172/344 (50%), Gaps = 6/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL-AVIATVSVMCLF 74 + ++L ++ L F + I + WPI+ + ++ T+ V+ +F Sbjct: 33 VAVLVLAGIWTLHPFLPALGWGGIFAISLWPIHERCAAHWPSGRGLALPILFTLLVLLIF 92 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP++ + + + + AN G+PVP +++ +P G + W +L P+S+ Sbjct: 93 VVPMVMVASAVIHDSMAATQWLATANTQGVPVPDFVAHLPYGDHLAAWWQSYLGTPESIS 152 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 LS D + + + + FM++ LFF RDG S++Q L Sbjct: 153 RLSHR-----ATDMHLQTGEKILGGLAHRLILLFFMLLTLFFLLRDGTSVAQALRIGSRR 207 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F ++++ + IR T G+ I+ GEG++LG AY L+GV LG++T +++ I Sbjct: 208 AFGEAGERVAHQAAQAIRGTVNGLVIVGFGEGVLLGFAYELSGVTHAALLGLLTGLLSAI 267 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P GA ++ A + L+ G+I A + + G + +F+ D +RP +GG +LPFL Sbjct: 268 PFGAMVAVAAAAGLLVADGSILAAGIVLVIGIVVIFVADHFVRPAFIGGATRLPFLWVLL 327 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ T GL+GL +GP ++A++ ++W+E + +K + Sbjct: 328 GILGGIETWGLIGLVMGPAIIAVLMLLWREWVGMVKGPLNPVEE 371 >gi|171056705|ref|YP_001789054.1| hypothetical protein Lcho_0013 [Leptothrix cholodnii SP-6] gi|170774150|gb|ACB32289.1| protein of unknown function UPF0118 [Leptothrix cholodnii SP-6] Length = 363 Score = 188 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 4/327 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F + A I+ + SWP++ ++ + A+ + + V LL+L Sbjct: 35 FVVMRPFLVSIAWAAILVYVSWPLHVRTLALLRGHRAWAALAMSGVLTLTLGVTLLWLGL 94 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ +V Q G +P ++ IP + L+ + + L Sbjct: 95 LLRGELILAFREVTALLQTGPHLPEPIARIP---LLGPWLQERLAEFGGDRAALKLQLTE 151 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + R G + ++ L ++ FF +RDG + +QL + + L Sbjct: 152 LAEQWAGRTLRILGDVGVNALL-FGVALVTSFFLFRDGDRLLEQLRRILQGLLGERVDGY 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V R+ G+ + A +GL+ G YW+AGV + V G TA++A+IP GAP+ + Sbjct: 211 FNAVGDTTRAVVYGLLLAATAQGLMAGLGYWVAGVKAPVFWGAATAVIALIPFGAPLVWG 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ ++LL++G + L LWG + + +D +RP ++ G +PFL FG++GG+ Sbjct: 271 SIGLWLLLQGQLGAGIGLLLWGGLAVSWIDNLVRPMVISGVADIPFLLVLFGVMGGLAAF 330 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 GL+GLF+GPV++A++ +W+E I+ Sbjct: 331 GLIGLFVGPVVLAVLLALWREWAAVIE 357 >gi|148254442|ref|YP_001239027.1| hypothetical protein BBta_2998 [Bradyrhizobium sp. BTAi1] gi|146406615|gb|ABQ35121.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 359 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 148/344 (43%), Gaps = 5/344 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +++ I L + L F+ VL L+ P++ A + + Sbjct: 7 RVLLVLLVAITLTLGWILLPFYGAVLWGLVGAVVFAPLHRRLARSMHGRDGLAAAVVVLL 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + I+PL + + + ++ G + + +P W +L + Sbjct: 67 VVLIVIIPLSLIGAALAQQATGVYAQAQSGQLDIGQYFQKMMEALP--TWVVDLLNRFGL 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G I A G ++ +++ M+ LFF RD ++S+++ Sbjct: 125 GSLAGLKDRLSAVLLRGSQMIAGQALNIGQGTFEFFVNLFLMLYLLFFLLRDQDALSERI 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L + VIR+T G ++A+ +G + G +W G+ + + V+ Sbjct: 185 -ATAIPLRTEQRNALLHKFTVVIRATVKGNLVVALAQGALGGLIFWFLGITAPLLWAVVM 243 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P GA + + V++YLL G I++ L +GA+ + +VD LRP LVG K+ Sbjct: 244 AFLSLLPAVGAGLVWFPVALYLLATGAIWHGVILIAYGALVIGLVDNLLRPILVGQDTKM 303 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P +GG+ GL G IGP + A+ IW A ++ Sbjct: 304 PDYVVLISTLGGIEAFGLNGFIIGPAMAAMFIAIWSMFSDARRD 347 >gi|21674815|ref|NP_662880.1| hypothetical protein CT2004 [Chlorobium tepidum TLS] gi|21648033|gb|AAM73222.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 366 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 90/352 (25%), Positives = 157/352 (44%), Gaps = 9/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M PQ +++ +L+S FL + F +L A I ++P++S FI+ + Sbjct: 1 MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + +PLL +F +L+ L S + + + P + + Sbjct: 61 SASMTLVIFFMMVFLPLLAVFTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLP--- 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S+ + + L G + F++ D L I +FF RDG Sbjct: 118 FYKDIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLVL-FIIFWYTMFFLLRDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +++ L + +++ V R++ G IIA+ +G + G A+++AG+ Sbjct: 177 HELLERIKYYLP-LNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQA 235 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G I A+++++P G+PI + I L + GN A LFL+ +I + +D LRP L Sbjct: 236 VFWGAIMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPIL 295 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG + L FFG +GG+ GL G IGPV+ AL +W E+ Sbjct: 296 VGRDTSMHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWDIYGETFNES 347 >gi|118579221|ref|YP_900471.1| hypothetical protein Ppro_0783 [Pelobacter propionicus DSM 2379] gi|118501931|gb|ABK98413.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 353 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 7/336 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + L F ++ A IG S+P+Y +++ AV T V+ Sbjct: 13 TFTLLMCYLLFTILAPFLTTMVWAGTIGAISYPLYDKLLARFRCRENLAAVAMTTLVVLA 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+PL+ L + E + ++ I S L + S Sbjct: 73 LIIPLVGLIFTLARETALAYQYIEGVTSGQS--GSFMESILRHPQVSPLLDRIRPLTGSF 130 Query: 134 KILSETFLKTN---GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++ L G+ + +++ FL + + ++ M+I LFF YRDG ++ Sbjct: 131 NLELDSMLLPALKRGLASLLNYSTGIVKNFLGFLIKLMLMLITLFFIYRDGRHFLRRFWP 190 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + I+ + +V+ + G + + +G + G +W+AG+PS G++ + Sbjct: 191 VVG-IDEKMRATIATTITRVLDAVLYGFLLTCLVQGTLGGLGFWVAGLPSPFLFGILMTV 249 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP G + + +IYLL +G I L +W A+ + +D +RP + G KLP Sbjct: 250 CAPIPLIGTAMIWMPGAIYLLTQGRILAGVLLMVWSAVAVSGIDNIIRPLFISGRAKLPI 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 FG++GG+ GL G+ GPV++AL V ++ Sbjct: 310 PVVIFGVLGGLLAFGLTGVVAGPVIVALFLVFFESY 345 >gi|146339666|ref|YP_001204714.1| hypothetical protein BRADO2660 [Bradyrhizobium sp. ORS278] gi|146192472|emb|CAL76477.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS278] Length = 359 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 144/345 (41%), Gaps = 3/345 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +++ I L + L F+ +L ++ P++ A + + Sbjct: 7 RVLLFLLAVITLALGWILLPFYGALLWGVVGAIVFAPLHRRVSQSMRGRDGLAAALVVLL 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + I+P + + + +V + + D L L Sbjct: 67 VVLIIIIPFSLIAAALAQQAAGVYGQVQGGQLDVTQYFQKMLDALPSWIVDLLNRFGLGS 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK L G I A G ++ +S+ M+ LFF RD ++S+++ Sbjct: 127 LAGLKDRLSALL-LRGSQVIAGQALNIGQGTFEFFVSLFLMLYLLFFLLRDEETLSRRIA 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + VIR+T G +A+ +G + G +W G+ + + V+ A Sbjct: 186 DAIP-LRDEQRDALLAKFIIVIRATMKGNLAVALAQGALGGLIFWFLGITAPLLWAVVMA 244 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 M+++P GA I + V++YLL G+I++ L +GA+ + +VD LRP LVG K+P Sbjct: 245 FMSLLPAVGAGIVWFPVALYLLATGSIWHGVILIAYGALVIGLVDNLLRPILVGQDTKMP 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +GG+ GL G IGPV+ A+ +W + EN+ Sbjct: 305 DYVVLLSTLGGIEVFGLNGFIIGPVIAAMFIAVWDMFTVVRSENR 349 >gi|58038558|ref|YP_190522.1| hypothetical protein GOX0069 [Gluconobacter oxydans 621H] gi|58000972|gb|AAW59866.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H] Length = 359 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 150/357 (42%), Gaps = 11/357 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ ++ I L F + +L A I+ FT+WPIY A+ Sbjct: 1 MTTERILLGLILAGIAYGCGIILWPFLSAILWAAILAFTTWPIYRRMRRHV--RPALAAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI---PVPRWLSDIP-GGMWAS 120 +VPL L G+ ++ +S++ H P P WL+ IP G Sbjct: 59 AMMALSALFIVVPLAVLTSAGISDIPGTISEIDTLILHVTSANPPPAWLNRIPMAGPHLV 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + R + ++ + FF + + Sbjct: 119 NAWHHFSHDVGAFATEVLRPYAGQIAHLTLTVLLRLAGGLAE----LVMALFVAFFLWLN 174 Query: 181 GFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + +L + + + ++ I+ + +R T G+ A+ +G++ G LAGVP Sbjct: 175 GDTLGNTITALIDRIAGPHTTPRLINIIGRTVRGTVYGILGTALIQGVLTGIGLMLAGVP 234 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S V L ITA +A+ P GAP+ + +I+L + + + L ++G + + D +RP Sbjct: 235 SPVLLAGITAFVAVFPIGAPLVWVPAAIWLGMTHHFGHGLFLAIYGILIISGADHVIRPA 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + +LP+L T G++GG+ T G +G+F+GPVL+A+ + E + Sbjct: 295 FIARGAQLPYLLTVLGVLGGIVTFGGVGIFLGPVLLAVGYTLTSEFAAGPHHRERNP 351 >gi|320352416|ref|YP_004193755.1| hypothetical protein Despr_0280 [Desulfobulbus propionicus DSM 2032] gi|320120918|gb|ADW16464.1| protein of unknown function UPF0118 [Desulfobulbus propionicus DSM 2032] Length = 404 Score = 186 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 6/344 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ +++ I + L ++ F P+ A I P + ++ +++ Sbjct: 7 NKSVLLALVLLISALFLDMIRQFLMPMFMAGIFSAILSPAHRWLTARIGNRENIASILVI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ L + PL L + + + V Q I P ++ + K + Sbjct: 67 VGIVVLVLAPLSILVGVVVGQAISVSQSVTPWVQSFINEPTAIT----AYMEKFPYYKEI 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ I + N F+ S + ++ S + M+ +F+F G + + Sbjct: 123 LPYRAVIIEKAGMMVGNLSTFLINSLSEVTKLTVNAVFSSVIMLYVMFYFLTMGEVLLTK 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ R V ++T G II +G + G A+ LAG+ V G + Sbjct: 183 ILYFLP-LQDRDERRLLRRFTSVTKATLKGTLIIGALQGFICGVAFALAGIQGPVFWGTV 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+M++IP G I + I L +KG F A L + +D LRP LVG + Sbjct: 242 MAVMSIIPAFGTAIVWVPALIILALKGQFFGAVILGVLCGAVAGNLDNLLRPRLVGKDTE 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L FG +GG+ G+LG+ IGP++ AL IW+ A + Sbjct: 302 MHDLFVLFGTLGGISMFGVLGIIIGPIVAALFITIWEIYGKAFE 345 >gi|330984387|gb|EGH82490.1| hypothetical protein PLA107_05089 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 351 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 82/358 (22%), Positives = 153/358 (42%), Gaps = 10/358 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + P GI +I+ ++ +LY L F + +I F +WP +I + Sbjct: 1 MISQLEKPIGIA--LIVGVLFAALYVLSPFAITLAWGALIAFATWPA-VKWIERTTGRLW 57 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPG-GMW 118 A + + + PL+ L + VV ++ +P P W++ +P G + Sbjct: 58 VGASAVCFMMFAVVLGPLVALSVSFAGDATVFTHWVVEMSKSTLPESPGWVTGLPWVGSY 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W+ + + + +L ++ I I + G + ++ +S++F F+F+ Sbjct: 118 LDHQWSLWHEKGPNWFLDVKPYL-SSLIHVIIGKSGVLGSVLVEIAISLLFA----FWFH 172 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +G I+ L + I I G+ +I + ++ +W+AGV Sbjct: 173 LEGEKITNLAQKALHALIGQASSRYWEIARNTISGVINGVIGTSIAQAVLALIGFWIAGV 232 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + LGV T +++IP G P+ + +L +G A L +W + + VD L+P Sbjct: 233 PGALLLGVGTFFLSLIPMGPPLLWVPAIGWLFYQGETGYAIFLAIWCVVVVSGVDHILKP 292 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ LP G++GG+ T+G LGLFIGPV +AL + +E + + Sbjct: 293 ILISRGGVLPLPIVLIGIMGGMLTLGFLGLFIGPVCLALSFTLVREWLNQRASTAAAV 350 >gi|107026443|ref|YP_623954.1| permease-like [Burkholderia cenocepacia AU 1054] gi|105895817|gb|ABF78981.1| permease-like protein [Burkholderia cenocepacia AU 1054] Length = 385 Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 7/253 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + +L + +GIP+P +S +P G +E W +L HP + + T + Sbjct: 95 TQAFAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHP----LHAATAM 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F +FG L FM++ LF R G +S L F Sbjct: 151 HGVNGEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGA 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ Sbjct: 211 ELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVV 270 Query: 262 FTAVSIYLLIKGN 274 F +++L ++G Sbjct: 271 FCGAALWLFVQGG 283 >gi|257091790|ref|YP_003165431.1| hypothetical protein CAP2UW1_0142 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044314|gb|ACV33502.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 375 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 161/336 (47%), Gaps = 7/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIATVSVMCLF 74 I+++S + L F +L+A + SWP+Y+ F ++ ++I T+++ Sbjct: 28 ALIVILSAWILNSFLQAMLAACVTAIASWPLYTRFAARLPRCIGRNSSSLIFTLALTIFV 87 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL+F F + E L+S + +A++ GI VP+ L + P G W + W L+ P +L Sbjct: 88 LAPLMFAFGALLSEAHALLSAIAVADKKGIAVPQGLENAPLIGPWLAARWQSQLASPGAL 147 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ + +A G + + I F ++ LFF Y++G S++ + Sbjct: 148 LTWTQR----TDAAALVPWAQSLGQFTVRHAFIIFFTVLLLFFLYQEGESLAAGFRRVLR 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + +R++ M ++A+ +GL G AY + GVP +T ++A+ Sbjct: 204 RCLGEHADGFADLATRAVRASVNSMLVVALFDGLASGVAYAIVGVPHAAVWAAVTGLLAL 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P ++ A+++ L + G LF DK +RP + ++L F+ Sbjct: 264 VPFLGYVAVGALALQLAMTVTTTPPLLALGLGCFVLFCGDKVVRPVVACNGVRLRFVWVL 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G +GG +GL+GL IGPV++ L +W++ + + Sbjct: 324 MGCLGGFEVLGLIGLVIGPVVLTLARELWEQRVRDL 359 >gi|297539825|ref|YP_003675594.1| hypothetical protein M301_2662 [Methylotenera sp. 301] gi|297259172|gb|ADI31017.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 354 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 6/334 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I ++ + F AP+ A ++ + SWP+ T A +AT + +PL Sbjct: 21 LIALASMVVAPFLAPIAWAGVLAYASWPVAERIRRWCNNKDTLAAFLATALLALTLFLPL 80 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILS 137 ++L + LE+ L + + PVP L +P G W + ++P ++ Sbjct: 81 IWLVWLAQLELGHLFPALQAFLANPPPVPETLRSLPWLGEWLMQQQAHFTANPNGASLVF 140 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + +L + D + A G ++ + RDG I ++L + E Sbjct: 141 KNWLAAHTAD-LSMLAGGLGKSLAKMIFVVVILFFFF----RDGTRIVRELRHVLERFIG 195 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A+ R+ G+ + A+ +G+V G YW+AG+ S V GV+T I+A+IP G Sbjct: 196 AHVHDYLHAAGTTTRAVVYGILLTALVQGVVAGLGYWVAGLSSPVMFGVLTMILALIPFG 255 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+++ A + LL++G A +++WGA + +D LRP + +PFL FG++ Sbjct: 256 TPLAWGAAGLLLLLQGETGAAIGVWIWGAAIVSQLDNVLRPLFISSISPIPFLLVLFGVL 315 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GG+ GL+GLFIGP++++++ +W+E + E Sbjct: 316 GGLLAFGLVGLFIGPIVLSVVWAVWREWTAHLDE 349 >gi|194334809|ref|YP_002016669.1| hypothetical protein Paes_2012 [Prosthecochloris aestuarii DSM 271] gi|194312627|gb|ACF47022.1| protein of unknown function UPF0118 [Prosthecochloris aestuarii DSM 271] Length = 363 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 6/334 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + + F +L A I + P+ F + + + +A VS+ + I PL Sbjct: 18 ISAIFFSMIYDFLMVILIAAIFSSLALPVNRFFERLFKGKKSLSSALALVSISLIGIFPL 77 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + + + P D+ + E + L + Sbjct: 78 FALMGIVAAQAVRISRSAGPWIEKRLEEPTAFHDLFLTLPFYETINAYSD----LILQRL 133 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + F+ S F + + + +FFF RDG + QQ L + Sbjct: 134 GEMVSKTGTFLFENISSFTLSTVHTLFLFFVFLYTMFFFLRDGRDMLQQALYYMP-LNQS 192 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 ++ V R+T G +I I +G + G A+ +AG+ S V G I ++++IP G Sbjct: 193 DQSRMLDKFTSVTRATIRGTFVIGIIQGTLAGLAFQVAGIESAVFWGAIMTVLSVIPVVG 252 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + + +YL G AT L ++ I + +D LRP LVG ++ L FFG + Sbjct: 253 SGLVWVPAVLYLYATGENVAATGLLIFCGILVSSIDNILRPVLVGRDTRMHELLIFFGTI 312 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GG+ G+ G +GP++ AL +W+ KE Sbjct: 313 GGIGLFGIAGFIVGPIIAALFITVWEIYGETFKE 346 >gi|189501154|ref|YP_001960624.1| hypothetical protein Cphamn1_2238 [Chlorobium phaeobacteroides BS1] gi|189496595|gb|ACE05143.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides BS1] Length = 379 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 76/327 (23%), Positives = 134/327 (40%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F +L A I + P++ F S + + + +++ + I PLL L Sbjct: 37 MIYDFLMVILIAAIFSGLAMPLFRWFESLFRGRRSISSAMTILTMALILIFPLLALLGIV 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E ++ V + + P DI + SE ++ L N Sbjct: 97 AAEAIKVSRSVGPWIEQRVEQPTAFDDIFSSLPYSETIIQYSDEILQRLGE----LVGNM 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F+ S F + + + +FFF +DG + + + L ++ Sbjct: 153 STFLFENLSSFTLSTVHTLFMMFVFFYTMFFFLKDGRDMLESVLYYLP-LGERDQSRMLD 211 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V +T G +I I +G + G A +AG+ S + G + ++++IP G+ + + Sbjct: 212 KFTSVTGATIRGTFVIGILQGTLAGLALKVAGIESAIFWGAVMTVLSIIPIIGSGLVWGP 271 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +YL G +AT L L+ + + VD LRP LVG K+ L FFG GG+ G Sbjct: 272 AVLYLYATGEYVSATGLLLFCGLLVSSVDNILRPILVGRDTKMHELLIFFGTFGGISLFG 331 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G +GPV+ AL +W+ K+ Sbjct: 332 ISGFIVGPVIAALFITVWEIYGETFKD 358 >gi|258542289|ref|YP_003187722.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633367|dbj|BAH99342.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636426|dbj|BAI02395.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639479|dbj|BAI05441.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256642535|dbj|BAI08490.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256645590|dbj|BAI11538.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256648643|dbj|BAI14584.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256651696|dbj|BAI17630.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654687|dbj|BAI20614.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 363 Score = 185 bits (471), Expect = 8e-45, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 151/352 (42%), Gaps = 12/352 (3%) Query: 7 NPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + IMR +++ I + L F + +L A ++ +T+WP++ + ++ Sbjct: 8 STERIMRLLLLGGITYGCVLVLAPFSSALLWAGVLAYTTWPLFQHLRRRMG--PNAASLT 65 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL---ANQHGIPVPRWLSDIPG-GMWASE 121 T+ ++PL FL + +++ P+P W++ +P G S Sbjct: 66 MTLLCAVGVVLPLAFLASACVSSGPRWARQIMTFVGTIHELPPLPHWVTSLPAFGPDISH 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + S+ + I + M + L ++ + FFF+ G Sbjct: 126 HWERWSRNISSVGDELRPYAGE-----IIQSLLEVLMRMANGALHLVMALFIAFFFWLSG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ + + IV +R T G+ AI +G++ G WL GV Sbjct: 181 PMLWDTVQAVMVRIAGHQAGRHLHIVGSTVRGTVYGILGTAIIQGILTGLGLWLLGVGEA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+ A +A+ P GAP+ + +++L + L L+G + + D +RP + Sbjct: 241 VILGVLAAFLAVFPIGAPLVWIPAALWLFGMHHPGKGILLLLYGVLIISGADHLIRPLFI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 KLP+L T G++GG+ G +G+F+GP+L+A+ + E Sbjct: 301 ARGSKLPYLLTVLGVIGGLLAFGGVGIFLGPILLAIGFTLTTEFAADEAAQP 352 >gi|197285279|ref|YP_002151151.1| hypothetical protein PMI1420 [Proteus mirabilis HI4320] gi|227355709|ref|ZP_03840102.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|194682766|emb|CAR42995.1| putative membrane protein [Proteus mirabilis HI4320] gi|227164028|gb|EEI48925.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 370 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 140/357 (39%), Gaps = 7/357 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 T + I F I+ S + L F + A +I +WP+ + + Sbjct: 7 HTDIPKILFTVLFISFFIIGSFWILNPFIVGFIWAGMIVVATWPLLIILEKRVKYR-WLS 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 +I + ++ +F++P++ L + L+ + P WL +IP G E Sbjct: 66 TMIMMILILLIFVIPIILLISSVIDNSAPLIELAKSPSDIQPPQLLWLKEIPMVGNTLYE 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L + + ++ A G L + ++F + + G Sbjct: 126 TWHSILVSGGNALMAKIQPYIGQAANWFFAQALNIGRFALHLVVMLLFSGL----LFLQG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L L + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 182 ENVVAWLRHFAVRLAGQRGDAAILLASMSIRAVALGVVLTALIQAVIGGIGLGISGVPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G ++L G+ + +WG I + +D LRPFL+ Sbjct: 242 TVLTVLMFICCLAQLGPLFVLVPSILWLFWTGDTTWGIVMIIWGGI-VATMDGVLRPFLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ T+G++GLFIGPV++A+ + I + + ++ Sbjct: 301 KMGADLPMVLILTGVIGGILTLGMIGLFIGPVVLAVAHSLLNAWINEVPKPDPDLTE 357 >gi|329113453|ref|ZP_08242234.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] gi|326697278|gb|EGE48938.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] Length = 363 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 151/352 (42%), Gaps = 12/352 (3%) Query: 7 NPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + IMR +++ I + L F + +L A ++ +T+WP++ + ++ Sbjct: 8 STERIMRLLLLGGITYGCVLVLAPFSSALLWAGVLAYTTWPLFQHLRRRMG--PNAASLT 65 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL---ANQHGIPVPRWLSDIPG-GMWASE 121 TV ++PL FL + +V+ P+P W++ +P G S Sbjct: 66 MTVLCAVGVVLPLAFLASACVSSGPRWARQVMAFVGTIHELPPLPHWITSLPAFGPDISH 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + S+ + I + M + L ++ + FFF+ G Sbjct: 126 HWERWSRNISSVGDELRPYAGE-----IIQSLLEVLMRMANGALHLVMALFIAFFFWLSG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ + + IV +R T G+ AI +G++ G WL GV Sbjct: 181 PMLWDTVQAVMVRIAGHQAGRHLHIVGSTVRGTVYGILGTAIIQGILTGLGLWLLGVGEA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+ A +A+ P GAP+ + +++L + L L+G + + D +RP + Sbjct: 241 VILGVLAAFLAVFPIGAPLVWIPAALWLFGMHHPGKGILLLLYGVLIISGADHLIRPLFI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 KLP+L T G++GG+ G +G+F+GP+L+A+ + E Sbjct: 301 ARGSKLPYLLTVLGVIGGLLAFGGVGIFLGPILLAIGFTLTTEFAADEAAQP 352 >gi|323260092|gb|EGA43717.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 337 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 126/328 (38%), Gaps = 7/328 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 A I +WP+ + ++ T+ ++ LF++P+ L + Sbjct: 1 MGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLLFVIPVALLVNSIVDGSGP 60 Query: 92 LVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ V +P WL++IP G W L S + + Sbjct: 61 LI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGSAIMAKVRPYIGTTTTWFV 119 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A+ G + L ++F + Y G ++ + L + + Sbjct: 120 GQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQA 175 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G I+L Sbjct: 176 IRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAIIWLY 235 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G+ T L +W A + +D +RP L+ LP L G++GG+ G++GLFI Sbjct: 236 WTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFI 294 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISS 358 GPVL+A+ ++ + + + Sbjct: 295 GPVLLAVTWRLFSAWVHEVPAPTNEPEE 322 >gi|269103476|ref|ZP_06156173.1| predicted permease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163374|gb|EEZ41870.1| predicted permease [Photobacterium damselae subsp. damselae CIP 102761] Length = 362 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 150/352 (42%), Gaps = 15/352 (4%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 WM++ ++++ Y ++ + P++ A+II P++ K S ++++ Sbjct: 11 HWMLVVALVIAGYASYRIIEPYLGPIIMAVIISLLCHPMHEKIRGKMPGSPNIASLLSCT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++P+L +F + + + + + ++ + Sbjct: 71 LLTFIIMIPMLVVFSSIVHQGTTFSKESYTWLTDGGAKELFAHPYVQK--SFALIDKYSP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 PQ + + G + G + ++ +S I M+ LFF RD + Sbjct: 129 FKSIDPQEVLQKIASIASQLGSTLLNVSTKLLGDVT-NFLMSFILMLFVLFFLLRDHDKM 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L + + V V +S LG + A+ +G+ G A WL G P + Sbjct: 188 VATVRNVLP-LSRSQEDALFSEVQTVAKSAVLGSFMTALAQGVAGGFAMWLCGFPG-LFW 245 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV-G 302 G + A + IP G + + ++YLL+ G A L WG I + +D LRP L+ G Sbjct: 246 GSMMAFASFIPVVGTALIWVPATLYLLLLGQWEWALFLTGWGIIVVGSIDNVLRPLLMQG 305 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G + L FF ++GG++ GL+GL GP++ + V++K + K+ E Sbjct: 306 GDSNMNTLLIFFSILGGLQLFGLIGLIYGPIIFGVTLVLFKLYEIEFKDFLE 357 >gi|296115814|ref|ZP_06834440.1| hypothetical protein GXY_08485 [Gluconacetobacter hansenii ATCC 23769] gi|295977791|gb|EFG84543.1| hypothetical protein GXY_08485 [Gluconacetobacter hansenii ATCC 23769] Length = 352 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 84/353 (23%), Positives = 167/353 (47%), Gaps = 6/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T + +I+ SLY + F + +I+ T++P+Y + ++ + Sbjct: 1 MGNTSRVQYVATGGFVCLVIMASLYIEQSFLGAFVWGIILSITAFPLYQ-VLRRRGCGNM 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WA 119 +++ +V + L VPL+ + + ++ L A+Q GIPVP+ ++D+PGG Sbjct: 60 VASLVISVGIFALLAVPLVAMVAKAVADLPSLYDWAKSASQTGIPVPKQVADLPGGSSKI 119 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + LW K+LS P L+ T+L + F ++ + + +++++FF Sbjct: 120 APLWQKYLSDPNELR----TWLGSVSHTFATADGKNLTHRLMEVAETFMIAVLSVYFFLV 175 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ + ++G+ + +R T G+ ++ +GEG ++G Y++AG P Sbjct: 176 SAESLIGDIRAVGKKFLGRRATDAIDNIVGSVRGTVAGLVLVGMGEGGIIGIGYFMAGTP 235 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++TAI++++P P+ + A + L G + F D +RP Sbjct: 236 HPALFMLVTAIVSIVPFCGPVILALAAATTFAASGGGAALIVGLIGCVAYFFGDHFVRPK 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ G K+PFL ++GG+ GLLGLFIGP ++A+ +W+ ++ + + Sbjct: 296 LISGNTKIPFLAVLTAILGGLHACGLLGLFIGPAVIAVAFSLWRSAVADSRAD 348 >gi|307826374|ref|ZP_07656577.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307732582|gb|EFO03456.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 350 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 133/334 (39%), Gaps = 5/334 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F A+I+ P+Y + S + + ++ +F++PLL + Sbjct: 21 FFLLIKDFLLACFWAIILAVVFDPVYQRIRQYFKNSEILPLFLTMMMIILVFVIPLLTII 80 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E K+ I + DI + H+ +I + Sbjct: 81 LMITEESTGYYQKIASGE---INPQVYFQDILALVLPKFYKLSHIQAISVEQISASAGNA 137 Query: 143 -TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T + +I + L+ + + LFF RDG + ++L SL + Sbjct: 138 FTQAVKYIAQQLPALTQNLLNLIVQVALAFYILFFLLRDGQQLIRKLISLIP-IGDGIEI 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ V R+T G I+A+ +G + G +W G+P+ G++ +++++P G+ + Sbjct: 197 ELFERFTSVARATVKGGLIVAVIQGSIGGFLFWFVGIPAAFLWGILMIVLSLLPIGSTLI 256 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +I L ++G A + G + + ++D LRP L+G K+ +GG+ Sbjct: 257 WVPAAIILFLQGQTLKAAIVLAIGILVIGMIDNFLRPRLIGKDSKMSDYLVLVSTLGGLT 316 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L G +GP++ AL W + +K K Sbjct: 317 WFSLTGFVLGPIIAALFITCWDLMGQESQASKRK 350 >gi|146313035|ref|YP_001178109.1| hypothetical protein Ent638_3398 [Enterobacter sp. 638] gi|145319911|gb|ABP62058.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 360 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 151/355 (42%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 ++ PQ + +I+ +L S ++ L F ++ A +I +WP+Y++ K Sbjct: 4 IKHPRDLPQTLFGILIILTLLSSAIWILHPFLLSIVWAGLIVIATWPLYTTVQRKLGGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMW 118 + V + +F++P++F ++L+ ++ ++ +P +L+ IP G Sbjct: 64 KLAITVMMVFLTAIFLLPIIFSAGMLSTLFEDLLQWLMHLDKSHLPSLDFLAHIPIVGEH 123 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + + T I + + S+FG +F++ + M++A FY Sbjct: 124 LHRKWLALIHENAESIFDTLKPWITKVIVILAQGLSQFGALFVNGLM----MLLACLAFY 179 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G +I++ L + A + I++ +G+ + A+ + + G + + Sbjct: 180 LYGTTITRGLRQFAFRIAGARGDNAVLLAGTTIQAVAMGVVLTAVIQSIFAGVGLAVCHI 239 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 PS L I ++ ++ G I I+L +G +N L +W + +D L+P Sbjct: 240 PSSALLTGIIFVLCLMQLGPVIIMLPALIWLFYQGEHWNGAVLLVW-TVIAGSLDNILKP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ L G++GG+ T G++GL IGPVL+A+ + + Sbjct: 299 ILIKRGADTSLLLIMTGVIGGMLTWGMIGLMIGPVLLAVSWKLLSTWVSEAHYQP 353 >gi|37522328|ref|NP_925705.1| hypothetical protein glr2759 [Gloeobacter violaceus PCC 7421] gi|35213328|dbj|BAC90700.1| glr2759 [Gloeobacter violaceus PCC 7421] Length = 368 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 81/352 (23%), Positives = 152/352 (43%), Gaps = 14/352 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 Q M + + V+ L F + A I+ SWP+Y ++ S + A+ Sbjct: 4 RQQWAMLVVAGVLAWVAYLVLGPFLPAIAWAAILALVSWPLYQKVYEILDKRSIYAALAM 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--------VPRWLSDIPGGMW 118 T+ V I+P++ + + EL V + + R ++ +P Sbjct: 64 TLLVSLSVILPVVLIAASLASDAVELYRTVQADGSMSLAALKESYAALGRTVARVPVVGG 123 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + W + + Q + L +G I + + FG +++ I LFF Y Sbjct: 124 QLQNWLREVDLVQVQQWLR------SGAGRILTWLAGFGQAISGALVTLGLTIFTLFFLY 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + +Q E L + + +R+ LG+ + +GL+ G W+AG+ Sbjct: 178 LSGLDLVRQTREALEKLGGEPLVSLLDPLGATVRAVVLGLVLTGAAQGLLAGLGLWVAGI 237 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LGV+ A+++++ P+ + I+L G + A LFLWGA+ + +D L+P Sbjct: 238 EIALILGVLAALLSILQIPTPVVWFPCVIWLAANGQTWQAVALFLWGALVVGTIDNFLKP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +P L FFG++GG+ G +G+ +GPV +AL+ V+W+ + Sbjct: 298 LFISQGTGIPILLVFFGVLGGLLAFGTIGIVVGPVSLALLLVLWRRWTAPPE 349 >gi|220921861|ref|YP_002497162.1| hypothetical protein Mnod_1869 [Methylobacterium nodulans ORS 2060] gi|219946467|gb|ACL56859.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 363 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 7/354 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST- 60 RET + M++ + + L+ L GF ++ A+I+ WP+Y+ + Sbjct: 12 RETERSHAVARAAMVLGLASIGLWTLHGFLPALVWAVILTIALWPLYARLTRRFPGGRHN 71 Query: 61 -FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-W 118 + T+++ + +VPL F+ E +++ + G PVP ++ +P G Sbjct: 72 LLWPSLFTLALALVILVPLAFVAVQAAREAHDVLQFWRQIEEQGWPVPEAVAHLPFGAAQ 131 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S W ++L HP L +++ + FG + F ++ LFF + Sbjct: 132 VSAWWQENLGHPAGTSDLLHRIERSS----LIGLGGSFGKQIAHRVVLFGFTLLTLFFLF 187 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG ++++Q LF + ++++R + + T G+ ++ +GEG +LG Y AGV Sbjct: 188 RDGPAVAEQGLVACRRLFGSRGERVARQMAASVHGTVDGLVLVGLGEGFLLGLVYHFAGV 247 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P V LG TA+ AMIP + F ++ + G++ A + + G + F+ D +RP Sbjct: 248 PHPVLLGAATALAAMIPFAVVVVFGLAAVLAAVNGSVAAAAVVVIAGMVVTFVADHFVRP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+GG +LPFL G++GGV GLLGLF+GP +MA + ++W++ E Sbjct: 308 ALIGGATRLPFLWVLLGILGGVENFGLLGLFLGPAVMAALVLLWRDFTAGEGET 361 >gi|108757825|ref|YP_632271.1| hypothetical protein MXAN_4093 [Myxococcus xanthus DK 1622] gi|108461705|gb|ABF86890.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 385 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 139/350 (39%), Gaps = 10/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ + + +++ L F PVL + P+ S K + Sbjct: 1 MADSRRWSNFVFAGLFALALILFSRILLPFLMPVLLGGFLVVLFMPVQDSLCQKLGGRKS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A ++TV+V L + PL + + E+ + V + + + +L+ +P G+ Sbjct: 61 LSAGVSTVTVFVLILAPLALVGWMVAREVFQFVGQAQVLLEQQHLRHPFLASLPLGL--- 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++L L D +++ M +A+++F+ D Sbjct: 118 ---ERYLRLGVDSAETERALLAAMTGG--ASLLRDVAAAGTDLVINLFLMSVAMYYFFLD 172 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ L L Y++ +R V + G T+ A+ +G V +AGVP Sbjct: 173 GRRLVAEVMRLIP-LDRRYFEAFAREFTDVAYAIIYGNTVTALIQGAVGFVGLLIAGVPH 231 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G ++A++P GG + + + + L+ + L WGA + +D +RP Sbjct: 232 AGVWGAAMVLVALVPVGGTALVWGPIGVVLIAANQVSEGVFLLAWGAFLVGSIDNVIRPR 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L G + L L F + GG+ G++GL +GP++ ++ + + Sbjct: 292 LCGSRMALHPLLVFLSMFGGLAVFGMMGLLVGPLIASIFMAMVRIYRRDF 341 >gi|27375768|ref|NP_767297.1| hypothetical protein bll0657 [Bradyrhizobium japonicum USDA 110] gi|27348906|dbj|BAC45922.1| bll0657 [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 72/353 (20%), Positives = 151/353 (42%), Gaps = 3/353 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + ++ I + + L F +L A ++ P+Y + E Sbjct: 14 RHVRTSEDRSFLVLLAAISVAFGWLLWPFSGALLWATLLAIIFAPLYRLCLETFPEWRNL 73 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+ + V+ + ++P+ + + + EL +V + L WA+ Sbjct: 74 AALSTVLVVVVMVLIPVAVVIASLVEQGGELYQRVQTGEISFAHPLQQLKSALP-DWAAS 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S + L + A G + +++ S++ M+ LFFF RDG Sbjct: 133 VSDRLAGIDLSALKERLSSLVVPAGQQLAGHAINIGQLTVEFVASLLVMLYLLFFFLRDG 192 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ ++ L ++ I +R T G+ ++A+ +G + G +WL G+ + Sbjct: 193 DELNLRIRDALP-LRRSHTAAILDAFTLSVRGTIKGIILVALIQGALGGLIFWLLGLTAP 251 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A+++++P G+ + + V +YLL+ G + L ++G + + D LRP L Sbjct: 252 LLAGALMALLSLLPVLGSALVWVPVGLYLLVAGAVTKGMILLVFGTFVIGLADNFLRPVL 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG I++P +GG+ T G G IGP++ A+ W + + ++ + Sbjct: 312 VGQSIRMPSYVVLLATLGGLATFGANGFVIGPLVAAMFLTAWHIFVGSKEQQE 364 >gi|296445779|ref|ZP_06887732.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296256759|gb|EFH03833.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 349 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 153/324 (47%), Gaps = 8/324 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F P+ A I+ + ++P+Y + + A AT+ ++ + +VP+ FL Sbjct: 24 SPFLTPLAWAAILAYATYPVYRRILRASGNRPSLAATFATLLLVVVLVVPVAFLLVRLQS 83 Query: 88 EMKELVSKVVLAN-QHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ E ++ I +P ++ P G ++ + P+ + + +++ Sbjct: 84 DLAEAYRELSSQFADEPIVLPDAVARFPVVGPALDDMLNTIWNDPERRREQVKEWIEP-- 141 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ A GMI I IALFFFYRDG + ++L + + A R Sbjct: 142 --WMSGLARTLGMIGRSLA-QIALTAIALFFFYRDGALVVEELRAGLRKVVGASADNYVR 198 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + ++ G+ + A+ +GL+ G Y + GV + + LG +TA+ A++P G + Sbjct: 199 AIGATTQAVVSGVIVSALFQGLIAGVGYAVVGVGTPILLGALTAVAALVPFIGTWAVWAP 258 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V +YLL+ G L WG + + VD ++P L+ +P + FG++GG+ G Sbjct: 259 VGVYLLVVGQTGAGVALLAWGGLVVSWVDNIIKPLLISSAADIPLVIVLFGVLGGLLAFG 318 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 +GLF+GP+++A++ IW+E + Sbjct: 319 FVGLFLGPLILAVLLSIWREWLAG 342 >gi|312797187|ref|YP_004030109.1| hypothetical protein RBRH_01983 [Burkholderia rhizoxinica HKI 454] gi|312168962|emb|CBW75965.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 363 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 131/339 (38%), Gaps = 7/339 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SLY + F ++ A +I +WP+ + + +++ + +PL Sbjct: 27 SLYIMSPFLPALIWATMIVVATWPLMRGAQERLGGRRGRATALMLAALLIVIALPLYGAV 86 Query: 83 YYGMLEMKELVSKV-VLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 ++ L + P P WL ++P G + W + + Sbjct: 87 VAIAAHADTILQYARALPDYRPAPPPAWLHEVPLIGERITSAWQRLTHAGVDGLLEFVAP 146 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 G ++ A+ G + + L++I + Y G + + + L Sbjct: 147 YADTGAKWMVSHATAVGGVLIHLLLTLILCGV----LYMHGETAAGAVRRFAYRLADERG 202 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 R+ + IR+ LG+ + A + + G + AG+P + IT I+ + G + Sbjct: 203 TAAVRLAGQAIRAVALGIVVTAAVQSALAGLGLFAAGIPGAGMVCAITLILCLAQIGPLL 262 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 +I+L + + +W A + +D +RP L+ + LP L G+VGG+ Sbjct: 263 PLIGAAIWLFYQDATIAGVAMLVW-AFVVSSLDNVIRPPLIQRGVDLPMLLVLAGVVGGL 321 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GLFIGPV++A+ + I + + + Sbjct: 322 IAFGIVGLFIGPVILAVTYKLMHAWIDEQAKAVSRPARQ 360 >gi|325273487|ref|ZP_08139726.1| hypothetical protein G1E_10548 [Pseudomonas sp. TJI-51] gi|324101378|gb|EGB98985.1| hypothetical protein G1E_10548 [Pseudomonas sp. TJI-51] Length = 290 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 7/274 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + F + +L I+ F SWP+ T A + T++ + + +PL++L + Sbjct: 22 WVMAPFISALLWGAILAFASWPLMRLLTRVLGGRETLAASLLTMAWILIVALPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLK 142 +++ + V G+P P WL +P G W +L + L Sbjct: 82 LADHIRDATAFVRDVQVDGLPDAPAWLGGLPFVGERLVSWWQSLDQQGAALLASVKPHLG 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + R A + G L+ LS++F +FFFYRDG +S + L L Sbjct: 142 QVGNWLLARSA-QIGSGVLELTLSLVF----VFFFYRDGPRLSAFVLRLLHRLMGDRAAY 196 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +V ++ G+ A + L+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 197 YLELVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAW 256 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + +L+ KG A L +WG + VD L Sbjct: 257 IPATAWLVWKGEYGMAVFLGIWGTFVISGVDNVL 290 >gi|84393813|ref|ZP_00992559.1| putative permease [Vibrio splendidus 12B01] gi|84375553|gb|EAP92454.1| putative permease [Vibrio splendidus 12B01] Length = 361 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K +++++ V + + ++PLL +F + Sbjct: 29 IEPYVNSIVMAFIISLLMFPIHEWLEKKLPNKENIVSLLSCVILTFIIVIPLLAVFAAIV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH----PQSLKILSETFLK 142 + HG + L P + A +L PQ++ F Sbjct: 89 QQGSLFSQNTYQWVTHGG--IQTLFAHPLVVKALSFVNNYLPFDNIEPQAIAQKVGEFAT 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + A G ++ + M+ LFF RD I + + L + K Sbjct: 147 SFGSKLVGISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISVVRHILP-LSRSQEDK 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + + +V +S +G + AI +G G W+AG P + G + + IP G + Sbjct: 205 LLTEIEQVSKSAVMGSFLTAIAQGFAGGLGMWIAGFPG-LFWGTMMGFASFIPVVGTALI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL + G+ A L ++ + +D LRP L+ G + L FF L+GG++ Sbjct: 264 WIPAATYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGIQ 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL+GL GP++ A+ V++ K+ Sbjct: 324 LFGLIGLIYGPLIFAITIVLFNIYDEEFKD 353 >gi|209695990|ref|YP_002263920.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009943|emb|CAQ80257.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 361 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 78/349 (22%), Positives = 139/349 (39%), Gaps = 10/349 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ ++ + P++ A I+ P+++ K +S A+++ ++ + Sbjct: 18 LLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKSPNSAAILSCTALTFIIA 77 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS----HPQ 131 +PL F+F + + G + L P KHL P Sbjct: 78 IPLFFVFVAIVQQGATFSKDAYHWITEGG--IQTLFQHPIVSQILAFINKHLPFDAIDPN 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + G + A G + ++ M+ LFF RD I + Sbjct: 136 EITQKVAQLASQVGTKVVGVSAQILGDAT-NVLVNFFLMLFVLFFLLRDQDKIISAFRHV 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + ++ + +V +S LG + AI +GL G A WLAG P + G + Sbjct: 195 LP-LSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGFPG-LFWGTMMGFA 252 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP G + + +IYLL+ A L +WG + + +D +RP L+ G + L Sbjct: 253 SFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRPLLMQGNSGMNTL 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FF L+GG+ GL+GL GP++ AL V++ K ++ N Sbjct: 313 LIFFSLLGGIHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDKN 361 >gi|148979051|ref|ZP_01815296.1| putative permease [Vibrionales bacterium SWAT-3] gi|145962024|gb|EDK27312.1| putative permease [Vibrionales bacterium SWAT-3] Length = 361 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K + +++++ V + + ++PLL +F + Sbjct: 29 IEPYVNSIVMAFIISLLMFPIHEWLEKKIPNKANLVSLLSCVILTFIIVIPLLAVFAAIV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH----PQSLKILSETFLK 142 + HG + L + P + A +L P+++ F Sbjct: 89 QQGSLFSQNTYQWVTHGG--IQTLFEHPIVVKALSFVNNYLPFDNIEPKAIAQKVGEFAT 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + A G ++ + M+ LFF RD I + + L + K Sbjct: 147 SFGSKLVGISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISVVRHILP-LSRSQEDK 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + + +V +S +G + AI +G+ G W+AG P + G + + IP G + Sbjct: 205 LLAEIEQVSKSAVMGSFLTAIAQGIAGGFGMWIAGFPG-LFWGTMMGFASFIPVVGTALI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL + G+ A L ++ + +D LRP L+ G + L FF L+GG++ Sbjct: 264 WIPAAAYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGIQ 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL+GL GP++ A+ V++ K+ Sbjct: 324 LFGLIGLIYGPLIFAITIVLFNIYDEEFKD 353 >gi|307821972|ref|ZP_07652204.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307736538|gb|EFO07383.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 381 Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 104/332 (31%), Positives = 173/332 (52%), Gaps = 7/332 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F A ++ A+++ T+WPIY ++ T+ A++ T+ + L +VPL + Sbjct: 19 WVLHSFLALLVWAVVLAITTWPIYQRLLASNEIHGKVTWGALLLTLLIGALILVPLGYGL 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + E + L + A GIP P WL IP G WA + W L +P Sbjct: 79 SRLLNEAQSLGQILTEAQNVGIPPPVWLETIPMIGNWAKDTWMNALGNPVVANESLHWLG 138 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + FAS+ L + ++ LFF Y+ G +SQ + + LF Sbjct: 139 TGSAITYTKDFASQ----LLHRFFGFLLTLLVLFFVYQHGTGLSQYVLATNRKLFGETGV 194 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + +R+T G+ ++ +GEGL+LG Y LAG+ LG +T + AMIP A + Sbjct: 195 RYAIHATAAVRATVNGLVLVGLGEGLLLGVGYALAGLSHPAMLGALTGVFAMIPFAAKLI 254 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F A S+ L+ +G++ + LF++G + + + D +RP L+GG +KLPF+ T G+ GG+ Sbjct: 255 FGACSLVLIAEGHMAAGSSLFVFGVVVILLADNYVRPRLIGGAVKLPFIWTLLGIFGGLE 314 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLGLF+GP LMA++ IW++ + + + K Sbjct: 315 NFGLLGLFLGPTLMAVLISIWRDWVADMDKPK 346 >gi|283851814|ref|ZP_06369091.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283572730|gb|EFC20713.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 404 Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 135/337 (40%), Gaps = 8/337 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L+ F ++ +++ P+ T A++ T + I+P+ F Sbjct: 24 AYIVLRPFVDILIIGVVLAALFKPVQRRLDPLCGHRPTLSALLTTGLIFTCLIIPIFFFL 83 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL- 141 + + + V+ + Q + L +HL K+ + L Sbjct: 84 GSLLAQGVQSVNALQH--QLSVTDFNTLLSRDALAPYVGWVQEHLPFLDVKKLAFQADLL 141 Query: 142 --KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 N + ++ ++ + +I LFF RDG ++ Q L L Sbjct: 142 DISKNAGQLLLDSGTKIVGNVFVLTMNFVILIFVLFFLIRDGDAMLAQARYLLP-LSTDQ 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 +I R + V +S LG +IA+ +GL G ++ G+ + G + ++IP G Sbjct: 201 ENRIFRQLDDVAKSVILGAFVIALAQGLAGGIGLFIVGI-NPFFWGFMMGFASLIPVVGT 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + VSIYL++ G+ L +WGA+ + +D +RP L+ K+ F ++G Sbjct: 260 AIIWLPVSIYLMLTGDWQWGLFLAVWGAVVISSIDSVIRPLLMQNRSKMSTFWVFLAIIG 319 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++ G LG+ GP+++ V+ + E+ Sbjct: 320 GIKFFGALGILYGPLILGFAMVMLTLYAEDYRHVLEE 356 >gi|90413138|ref|ZP_01221134.1| putative permease [Photobacterium profundum 3TCK] gi|90325829|gb|EAS42281.1| putative permease [Photobacterium profundum 3TCK] Length = 361 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 153/356 (42%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 WM++ + +++Y ++ + P++ A II +P++ SK A+++ + Sbjct: 11 HWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLHIRIESKIPSKPNSAAILSCI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++PLL +F + + + + ++ + + + Sbjct: 71 LLTFIIVIPLLIVFSSIVHQGTTFSKDSYTWFSSGGAKELLAHPYVQKVL--LLIDKWSP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 Q++ + G + A G ++ +S + M+ LFF RD + Sbjct: 129 FESIDTQAILQKIASAASKFGAQLLNMSAKILGDAT-NFIISFMLMLFVLFFLLRDHAKM 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + V +V +S LG + A+ +G G A WLAG P + Sbjct: 188 VNAVRHVLP-LSRSQEDALLTEVEQVAKSAVLGSFLTALAQGFAGGFAMWLAGFPG-LFW 245 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + A + IP G + + ++YLL+ A L WG I + +D LRP L+ G Sbjct: 246 GSMMAFASFIPVFGTALIWLPAALYLLLINQWEWALFLSGWGIIVVGSIDNILRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG+ GL+GL GP++ A+ V++K + K+ ++ + + Sbjct: 306 NSGMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFKLYEVEFKDFLDQQNQS 361 >gi|194335494|ref|YP_002017288.1| protein of unknown function UPF0118 [Pelodictyon phaeoclathratiforme BU-1] gi|194307971|gb|ACF42671.1| protein of unknown function UPF0118 [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 146/357 (40%), Gaps = 6/357 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ Q I+ +++ I + + ++ F ++ A + + P+++ F + + A Sbjct: 3 SIKTNQLILLVLLLVISVTFVAMIRYFLMAIVLAALFSALAMPVFNRFERWFKGRKSLSA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++++ + +P L + + V Q I P + + + Sbjct: 63 SMTMLTLLLIVFLPFAALLGIVAKQAIRISRIAVPWVQQQILEPGAFDQ---QLRSLSFY 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L + + F + G S F + + +FFF RDG Sbjct: 120 PELLLYRTEIFQKVGEFASSTGTMLFNTI-STFTYSAVSDLFLFFLFLYTMFFFIRDGKQ 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + S L ++ V R+T G ++ +G + G A AG+ S + Sbjct: 179 LLAHFLSYLP-LRQTDQNRLLDKFISVTRATIKGTMVVGAVQGSLAGLALHFAGIDSALF 237 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G I ++ +++P G+ + + IYL G A + L+ +I + +D LRP L+G Sbjct: 238 WGTIMSLFSILPVLGSALVWVPAVIYLAATGQYPQAIGVLLFCSIVVGQIDNILRPMLIG 297 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++P L FFG +GG+ G+ G +GP++ AL IW+ KE +I S+ Sbjct: 298 RDTQMPELLIFFGTLGGISLFGVFGFILGPIVAALFMTIWEMYGETFKEYLSEIKSD 354 >gi|325527793|gb|EGD05065.1| hypothetical protein B1M_08312 [Burkholderia sp. TJI49] Length = 314 Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats. Identities = 81/302 (26%), Positives = 144/302 (47%), Gaps = 8/302 (2%) Query: 6 LNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFL 62 Q I R ++ ++L++L+ ++ F + A +I WP+ F S + T + Sbjct: 16 PRAQRIARAVLYTALLLLALWVIRAFIPAIAWACVIAIAMWPLLKRFESHRLVRNRPTIV 75 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASE 121 A + TV++ L ++P+ + + ++ + +GIP+P +S +P G ++ Sbjct: 76 ATVITVAISLLVVLPVALALTQAIAQAHDMRVWLRTIQDNGIPLPDVVSRLPYGSTQIAD 135 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W +L HP + NG FI F FG L FM++ LF R G Sbjct: 136 WWQANLGHP---LHAASAMHGVNGEKFIA-FGRLFGTKLAHALLEFGFMLVTLFVILRAG 191 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F A ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 192 HKLSGALLQGARRAFGADGAQLIERMVGAVNGTVTGLVVVGLGEGALLGIAYALAGVPHA 251 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++TA+ AM+P AP+ F +++L ++G A + + G + +F+ + +RP L+ Sbjct: 252 ALLGLVTAVAAMLPFCAPVVFCGAALWLFVQGATTWAVVVAVTGFVVVFVAEHFVRPVLI 311 Query: 302 GG 303 GG Sbjct: 312 GG 313 >gi|162147751|ref|YP_001602212.1| putative inner membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542376|ref|YP_002274605.1| hypothetical protein Gdia_0192 [Gluconacetobacter diazotrophicus PAl 5] gi|161786328|emb|CAP55910.1| putative inner membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530053|gb|ACI49990.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 157/346 (45%), Gaps = 11/346 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +M ++ + L F + +L A I+ F +WP++ + A+ Sbjct: 1 MAERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTG--PVTAAIG 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMK---ELVSKVVLANQHGIPVPRWLSDIPG-GMWASE 121 TV + +PL + + ++ E +++ + H P WL+ IP G ++ Sbjct: 59 MTVLSALVVALPLAVVVSTSIADLPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAK 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +WT+ + + + + + + M + + + FFF+ G Sbjct: 119 IWTQWATDLGHAERMLLPYTGSIAQSMLAGL-----MQVASGLVHLGMALFIAFFFWLGG 173 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S+ ++ + +Y +I I+ + IR T G+ AI +G++ G + L G+P Sbjct: 174 DSLGGTFSAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEP 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V G+ITA +A++P GAP+ + ++ L++ + L ++G + + D +RP + Sbjct: 234 VLFGLITACVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFI 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LP+L T G++GGV T G LG+F+GPVL+ + + E Sbjct: 294 SRGAQLPYLLTVLGVLGGVWTFGGLGIFLGPVLLGVGYTLTAEFAA 339 >gi|86148147|ref|ZP_01066446.1| putative permease [Vibrio sp. MED222] gi|218710464|ref|YP_002418085.1| putative permease [Vibrio splendidus LGP32] gi|85834064|gb|EAQ52223.1| putative permease [Vibrio sp. MED222] gi|218323483|emb|CAV19660.1| putative permease [Vibrio splendidus LGP32] Length = 361 Score = 181 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K +++++ V + + ++PLL +F + Sbjct: 29 IEPYVNSIVMAFIISLLMFPIHEWLEKKIPNKENVVSLLSCVILTFIIVIPLLAVFAAIV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH----PQSLKILSETFLK 142 + HG + L P + A +L PQ++ F Sbjct: 89 QQGSLFSQNTYQWVTHGG--IQTLFAHPLVVKALSFVNNYLPFDNIEPQAIAQKVGEFAT 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + A G ++ + M+ LFF RD I + + L + K Sbjct: 147 SFGSKLVGISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISVVRHILP-LSRSQEDK 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + + +V +S +G + AI +G G W+AG P + G + + IP G + Sbjct: 205 LLTEIEQVSKSAVMGSFLTAIAQGFAGGLGMWIAGFPG-LFWGTMMGFASFIPVVGTALI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL + G+ A L ++ + +D LRP L+ G + L FF L+GG++ Sbjct: 264 WIPAATYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGIQ 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL+GL GP++ A+ V++ K+ Sbjct: 324 LFGLIGLIYGPLIFAITIVLFNIYDEEFKD 353 >gi|59712743|ref|YP_205519.1| permease [Vibrio fischeri ES114] gi|59480844|gb|AAW86631.1| predicted permease [Vibrio fischeri ES114] Length = 361 Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 148/356 (41%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ +L ++ + P++ A I+ P+++ + S A+++ + Sbjct: 11 HWVLIAALLAAGYACFLLIEPYLNPIILAFIMSLLFAPLHNKISDRLPNSPNSAAILSCM 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMK----ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +PL F+F + + + V+ + +++ + + ++ Sbjct: 71 ALTFIIAIPLFFVFIAIVQQGATFSKDAYHWVIDGGIQTLFQHPFVAKVL--SFINKYLP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 P + G + A G + + ++ M+ LFF RD I Sbjct: 129 FDAIDPAEVTQKVAQLASQIGTRIVGMSAQIVGDVT-NVLMNFFLMLFVLFFLLRDQDKI 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + ++ + +V +S LG + AI +G+ G A WLAG P + Sbjct: 188 ISAFRHVLP-LSRSQEDRLLDEIEQVSKSAVLGSFLTAIAQGIAGGFAMWLAGFPG-LFW 245 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + + IP G + + +IYLL+ A L WG + + +D +RP L+ G Sbjct: 246 GTMMGFASFIPVVGTALIWVPATIYLLLTNQWEWAIFLTAWGVLVVGSIDNIVRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF L+GG++ GL+GL GP++ AL V++ K ++ N Sbjct: 306 NSGMNTLLIFFSLLGGIQLYGLIGLIYGPIIFALTLVLFNMYETEFKSFLDQQDKN 361 >gi|197335578|ref|YP_002156935.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] gi|197317068|gb|ACH66515.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] Length = 361 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 147/356 (41%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 W+++ +L ++ + P++ A I+ P+++ + S A+++ + Sbjct: 11 HWVLIAALLAAGYACFLLIEPYLNPIILAFIMSLLFAPLHNKISDRLPNSPNSAAILSCM 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMK----ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +PL F+F + + + V+ + +++ + ++ Sbjct: 71 ALTFIIAIPLFFVFIAIVQQGATFSKDAYHWVIDGGIQTLFQHPFVAK--ALSFINKYLP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 P + G + A G + + ++ M+ LFF RD I Sbjct: 129 FDAIDPAEVTQKVAQLASQIGTRIVGMSAQIVGDVT-NVLMNFFLMLFVLFFLLRDQDKI 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + ++ + +V +S LG + AI +G+ G A WLAG P + Sbjct: 188 ISAFRHVLP-LSRSQEDRLLDEIEQVSKSAVLGSFLTAIAQGIAGGFAMWLAGFPG-LFW 245 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + + IP G + + +IYLL+ A L WG + + +D +RP L+ G Sbjct: 246 GTMMGFASFIPVVGTALIWVPATIYLLLTNQWEWAIFLTAWGVLVVGSIDNIVRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF L+GG++ GL+GL GP++ AL V++ K ++ N Sbjct: 306 NSGMNTLLIFFSLLGGIQLYGLIGLIYGPIIFALTLVLFNMYETEFKTFLDQQDKN 361 >gi|328474213|gb|EGF45018.1| putative permease [Vibrio parahaemolyticus 10329] Length = 361 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 10/347 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ + ++ A II +P++ F K + +++ V Sbjct: 12 RVLMIALLAAAFACYLLVEPYINSIVMAFIISLLMFPVHEWFERKMPKHKNSASLLTCVV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++PLLF+F + + V I W+ I G +E Sbjct: 72 LTFIIVIPLLFVFAAIVQQGSVFSQNTYKWVTNGGIQDIFQHPWV--IKGLSIVNEYLPF 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P+++ F T G + + A G ++ + M+ LFF RD I Sbjct: 130 DKIEPKAIAEKIGQFATTFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKII 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L + +I + +V +S +G + AI +GL G WLAG P + G Sbjct: 189 SAIRHIMP-LSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWG 246 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + IP G + + + YL + G++ A L W + + +D LRP L+ G Sbjct: 247 TMMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTAWSVVIVGSIDNLLRPLLMQGS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L FF L+GG+ GL+GL GP++ A+ V++ K+ Sbjct: 307 AGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 353 >gi|54307733|ref|YP_128753.1| putative permease [Photobacterium profundum SS9] gi|46912156|emb|CAG18951.1| putative permease [Photobacterium profundum SS9] Length = 361 Score = 180 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 154/356 (43%), Gaps = 14/356 (3%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 WM++ + +++Y ++ + P++ A II +P+++ SK A+++ + Sbjct: 11 HWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLHARIESKISNKPNSAAILSCI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++PLL +F + + + + ++ + + + Sbjct: 71 LLTFIIVIPLLIVFSSIVHQGTTFSKDSYTWFSSGGAKELLAHPYVQKVL--LLIEKWSP 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 Q++ + G + A G ++ +S + M+ LFF RD + Sbjct: 129 FEGIDTQAILQKIASAASKFGAQLLNISAKILGDAT-NFVISFMLMLFVLFFLLRDHTKM 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + V +V +S LG + A+ +G G A WLAG P + Sbjct: 188 VNAVRHVLP-LSRSQEDVLLTEVEQVAKSAVLGSFLTALAQGFAGGFAMWLAGFPG-LFW 245 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + A + IP G + + ++YLL+ A L WG I + +D LRP L+ G Sbjct: 246 GSMMAFASFIPVFGTALIWLPATLYLLLINQWEWALFLSGWGIIVVGSIDNILRPLLMQG 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG+ GL+GL GP++ A+ V++K + K+ ++ + + Sbjct: 306 NSGMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFKLYEVEFKDFLDQQNQS 361 >gi|28899250|ref|NP_798855.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153838395|ref|ZP_01991062.1| putative permease [Vibrio parahaemolyticus AQ3810] gi|260362174|ref|ZP_05775164.1| putative permease [Vibrio parahaemolyticus K5030] gi|260879054|ref|ZP_05891409.1| putative permease [Vibrio parahaemolyticus AN-5034] gi|260895929|ref|ZP_05904425.1| putative permease [Vibrio parahaemolyticus Peru-466] gi|260903440|ref|ZP_05911835.1| putative permease [Vibrio parahaemolyticus AQ4037] gi|28807474|dbj|BAC60739.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149748202|gb|EDM59061.1| putative permease [Vibrio parahaemolyticus AQ3810] gi|308085368|gb|EFO35063.1| putative permease [Vibrio parahaemolyticus Peru-466] gi|308089577|gb|EFO39272.1| putative permease [Vibrio parahaemolyticus AN-5034] gi|308106571|gb|EFO44111.1| putative permease [Vibrio parahaemolyticus AQ4037] gi|308111062|gb|EFO48602.1| putative permease [Vibrio parahaemolyticus K5030] Length = 361 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 10/347 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ + ++ A II +P++ F K + +++ V Sbjct: 12 RVLMIALLAAAFACYLLVEPYINSIVMAFIISLLMFPVHEWFERKMPKHKNSASLLTCVV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++PLLF+F + + V I W+ I G +E Sbjct: 72 LTFIIVIPLLFVFAAIVQQGSVFSQNTYKWVTNGGIQDIFQHPWV--IKGLSIVNEYLPF 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P+++ F T G + + A G ++ + M+ LFF RD I Sbjct: 130 DKIEPKAIAEKIGQFATTFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKII 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L + +I + +V +S +G + AI +GL G WLAG P + G Sbjct: 189 SAIRHILP-LSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWG 246 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + IP G + + + YL + G++ A L W + + +D LRP L+ G Sbjct: 247 TMMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTAWSVVIVGSIDNLLRPLLMQGS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L FF L+GG+ GL+GL GP++ A+ V++ K+ Sbjct: 307 AGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 353 >gi|94971052|ref|YP_593100.1| hypothetical protein Acid345_4026 [Candidatus Koribacter versatilis Ellin345] gi|94553102|gb|ABF43026.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 360 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 68/331 (20%), Positives = 137/331 (41%), Gaps = 5/331 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F PV A++I P+Y + + + + + + + L +P FL Sbjct: 25 IVFPFIKPVAFAIVIAVVFNPLYQRLLKRTK-RPGTASFLTIIVFITLLAIPASFLVVTA 83 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +V V + + A+ ++L P S Sbjct: 84 TRQAMDVGHRVSETTTAHGGVAPTIERVSAKPLAT--LGRYLRIPPSELKQRIEDKLNVW 141 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + +I +FF +RDG + + +D + + ++I Sbjct: 142 AGRMMSQSGALLANLFSLLANSFIALITVFFLFRDGERVIEGMDRVLP-ITKEQLQRILN 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + I + GM + +G + V S + LG++ A+ ++IP G + + Sbjct: 201 GISNSIVANVYGMAAVGAAQGFLTALGLAFCSVSSSILLGLVAAMCSLIPIVGTGLVWVP 260 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + YL+I G++ L WGA + +D +RP ++ G ++ L F L+GGV+ G Sbjct: 261 AAGYLMITGHVGKGIFLLAWGAFVVSSIDNVIRPMVIQGRVQAHPLLILFALLGGVQAFG 320 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+GLF GP+L+++I V+ + + I+E K Sbjct: 321 LIGLFAGPILLSVITVLLQIMLEEIREKDAK 351 >gi|170733033|ref|YP_001764980.1| hypothetical protein Bcenmc03_1686 [Burkholderia cenocepacia MC0-3] gi|169816275|gb|ACA90858.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 390 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 75/333 (22%), Positives = 145/333 (43%), Gaps = 7/333 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +I SLY L+ F ++ A I +WP+ + ++ +++M + + Sbjct: 34 LSLLICGSLYILRPFLLALVWAATIVVATWPLLHEVQRRLRCRRGPAVIVMLLALMVVIV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +P+ +E+++ + L N P P WL+ +P G A+ W Sbjct: 94 LPIYGAVSTLAAHAEEIMTLLKGLPNYTLPPPPGWLAKLPLAGTHATREWQTLSDAGPGG 153 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + ++ AS G++ L L++I I + G ++ + + + Sbjct: 154 VLATLQPYASRLASWLLVRASAIGVLVLHLLLTVIICGI----LFAKGEAVGLTVTRVAQ 209 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + PA + R+V IR+ LG+ + A+ + + G W A VP L I I + Sbjct: 210 CVAPANGAAMVRLVEHAIRAVALGVMVTALAQSALGGLGLWGASVPYAGVLTAILFIFCL 269 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + A +L + A LF W + + +D +LRP L+ I LP + Sbjct: 270 AQLGPLLPLLACVTWLFVHDAKLAAILLFGWS-LGVTALDNSLRPILIRRSIALPMVLIL 328 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG+ G++GLFIGPV++A+ + + + Sbjct: 329 AGVLGGLIAFGMIGLFIGPVMLAVTYALMEAWL 361 >gi|224825906|ref|ZP_03699010.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] gi|224602130|gb|EEG08309.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] Length = 360 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 145/347 (41%), Gaps = 7/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++ L + F + A+II ++WP+Y A++ + + Sbjct: 18 AIVALLVWACLQVILPFLGALTWAVIIAISAWPLYQRLTQCLRGRGNLAALLVVLLLGLA 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQ 131 VPL + + L LAN P P WL IP G ++ W + Sbjct: 78 LAVPLGLMVLTLTDTLPHLNGIAHGLANFTLPPPPAWLGKIPLTGEALTQYWVTAQTDLP 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + ++ + + R G + L I+ II +G ++ + + + Sbjct: 138 GLLARLKPWINQGALWLLGR-----GAMLGVSLLEIVMAIIVAGLLLANGEALWRIAERV 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L A ++ ++V + IR G+ A+ + ++ +AGVP +ALG + ++ Sbjct: 193 INKLGGASASELPQVVARTIRGVTTGVVGTALAQTILCVIGLLIAGVPGALALGFLCFVI 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+ + + + ++ G L LWG + + +D L+P L+ KLP Sbjct: 253 AVAQLPTLLVWLPAAGWVFYTGATGMGVFLLLWGFLLVNTIDNVLKPLLISQGAKLPLSL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F G++GG+ G++GLFIGP L+A+ +++ + +E + K Sbjct: 313 IFLGVIGGLLAWGIIGLFIGPTLLAIGFTLFQFWLNNDEEAEAKPEH 359 >gi|116747741|ref|YP_844428.1| hypothetical protein Sfum_0292 [Syntrophobacter fumaroxidans MPOB] gi|116696805|gb|ABK15993.1| protein of unknown function UPF0118 [Syntrophobacter fumaroxidans MPOB] Length = 391 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 143/354 (40%), Gaps = 12/354 (3%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R ++ ++ SLY L F ++ +++I +P+ + + K T A+ Sbjct: 19 RPFLLVVLFYSLYLTYLILHPFLDTLIMSIVISSLFYPLQTWLVKKYRGRQTLAALTIVF 78 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +P+ F + + + ++++ + G + L+ P M + LS Sbjct: 79 IITFVIAIPIFFFASTLIAQGVQTINQINDWLRAGN--IQKLAQDPRVMELMDWVQTRLS 136 Query: 129 HPQSLKILSET---FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 K+ + L N F+ A+ ++ F+ RDG ++ Sbjct: 137 FLDLKKLDVSSNIMALSKNFGQFVLSRAATILGNVASLVTHFFILVFISFYLVRDGAAML 196 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ + V RS +G + A+ +GL+ G L G+P + G Sbjct: 197 DAARGFSP-LRKDQEDRLLGGIRVVARSVLMGAFMTALCQGLIGGIGVALIGLPG-LFWG 254 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + IP G + + ++ YL++ G +A L +W + + +D +RP+L+ G Sbjct: 255 TVMGFASFIPIVGTALVWVPMAAYLVLLGTWKSALFLAIWCIVLVGSIDNFVRPYLMRGQ 314 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L F ++G V+ GL G+ GP++++ ++ +E+ + S Sbjct: 315 SNLSPFYIFLSIIGAVQYFGLTGILYGPLIVSFAMIMLYLYGAEYREDLAESKS 368 >gi|254283806|ref|ZP_04958774.1| transporter, PerM family [gamma proteobacterium NOR51-B] gi|219680009|gb|EED36358.1| transporter, PerM family [gamma proteobacterium NOR51-B] Length = 373 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 147/347 (42%), Gaps = 3/347 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +++ FF +L A+I+ T +P++ + K + + + + ++++ + Sbjct: 24 LIALVVVACARIFAPFFGIMLWAVILAVTLFPLHQKLVPKFDGRAGRASTLMVLAILLIL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 VP++ L + +++S + PV + IP G LW Sbjct: 84 GVPMVTLGISAVDHTTDVLSNMKSGEFEVPPVNPAVGKIPIVGENLIALWESASEDFAGT 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + S G + L S+I + + + + ++ + L +L Sbjct: 144 LRDHKDQVSHYASVLLNSATSMLGAVLLSMG-SMIIAGVMMAYGHAGAAAMERVLHALVG 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ R+ +RS +G+ +A+ + L+LG + LAG+P+ L + + Sbjct: 203 DAGNNRGQQVLRLSTATVRSVAVGVIGVALIQALLLGVGFLLAGIPAAGLLTFAVFFLGI 262 Query: 254 IPGGAPISFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A + + YL G+ A + I D L+P L+G + P Sbjct: 263 LQLPALLITLPIIAYLWGVGDGSTLANSIASVYFIVAGTADGFLKPMLLGRGVDAPMPVI 322 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ +MG+LGLF+G V++A+ I+ + + + +E ++S Sbjct: 323 LLGALGGMVSMGMLGLFVGAVVLAVGYQIFMAWVDFVCDGREPLTSQ 369 >gi|85860942|ref|YP_463144.1| permease [Syntrophus aciditrophicus SB] gi|85724033|gb|ABC78976.1| predicted permease [Syntrophus aciditrophicus SB] Length = 350 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 7/350 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E ++ + LY +K FF P+ A+II P+Y+ I + S L Sbjct: 2 EISKTRHLAFVLLLGLVGFGFLYLMKPFFYPLFWAIIISSIVHPLYARLILRWP-SPNLL 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + V V+ + I+P +F+ + + + + + + H + R L ++ G + + Sbjct: 61 SAVLLVLVLLILILPTIFIGSLLVSQSMSMYNTLSSDSSH---IARNLQELLGWISSHPY 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K L++ ++I S L M+ ALFFF RDG Sbjct: 118 IQKLDIDQNFWMEKLSEMLRSIA-NYIFTRLSSLTQNTLAAVAQFAIMLYALFFFIRDGE 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q L L + + +ST II +G + A+W+AG+ V Sbjct: 177 KLLQSAMRLLP-LGNQRERLLFDRFINTAKSTLKVTLIIGGLQGTLGALAFWIAGIEGSV 235 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A+IPG G I + I LLI G+++ + L+G + + +VD LRP L+ Sbjct: 236 LWGVIMIVTAIIPGIGCSIVWAPAGIILLISGHLWEGIMILLFGGLVISLVDNLLRPILL 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +++ L F +GG+ G G +GP++ +L+ I + +E Sbjct: 296 ERDVQMHPLLIFLSTLGGIVLFGFSGFVLGPIIASLMQSICQMYEQLYRE 345 >gi|89900931|ref|YP_523402.1| hypothetical protein Rfer_2147 [Rhodoferax ferrireducens T118] gi|89345668|gb|ABD69871.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 357 Score = 178 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 4/335 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F A + A I+ + +WP++ ++ T+ A+ T+ + + + LL+ Sbjct: 27 FVVMQPFVAAIAWAAILSYVAWPLHLKMLAWLGGRRTWAALAMTLVLTLVLGLSLLWAGL 86 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E V + + G+ +P + I +W + LS + L Sbjct: 87 LLRSEGAAAVREAAALLESGVRLPEAILSI---VWLGPWLQERLSALSGDRAAWGAPLSD 143 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + G + L+ L + F ++ FF + DG + +QL + L Sbjct: 144 LADQWGGHAMRMVGDLGLN-ALRLFFALLTSFFLFLDGDQMLEQLRGVLYGLLGNRVHAY 202 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + V R+ G+ + A+ +GL+ G YW GV + G TA++A+IP GAP + Sbjct: 203 FKAVGDTTRAVVYGLLLAALAQGLLAGLGYWAVGVRAPAFWGAATAVVALIPFGAPAIWG 262 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ +LL+KG I L LWGA+ + +D +RP ++ G K+PFL FG++GG+ Sbjct: 263 SIGAWLLLKGQISAGVGLLLWGALAVSWIDNLVRPLVISGVAKIPFLLVLFGVLGGLVAF 322 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL+GLF+GPV++A++ +W+E + +E + Sbjct: 323 GLIGLFVGPVILAILLALWREWAADNVQVREPPPA 357 >gi|269961961|ref|ZP_06176316.1| putative lipoprotein [Vibrio harveyi 1DA3] gi|269833284|gb|EEZ87388.1| putative lipoprotein [Vibrio harveyi 1DA3] Length = 409 Score = 178 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ F SK +++++ V + + ++PLLF+F + Sbjct: 77 VEPYVNSIVMAFIISLLMFPIHEWFESKMPNHKNLVSLLSCVVLTFIIVIPLLFVFAAIV 136 Query: 87 LEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V I W+ + G +E PQ++ F Sbjct: 137 QQGSVFSQNTYKWVTNGGIQDIFQHPWV--VKGLALVNEYLPFDKIEPQAIAEKIGQFAT 194 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + + A G ++ + M+ LFF RD I + + L + K Sbjct: 195 SFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISAMRHILP-LSRSQEDK 252 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 I + +V +S +G + AI +G G WLAG P + G + + IP G + Sbjct: 253 ILTEIEQVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTMMGFASFIPVVGTALI 311 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL + G+ A L +W + + +D LRP L+ G + L FF L+GG+ Sbjct: 312 WIPAAAYLFLTGDTTWAIFLTVWSVVVVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLH 371 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL+GL GP++ A+ V++ K+ Sbjct: 372 LFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 401 >gi|85375175|ref|YP_459237.1| hypothetical protein ELI_11740 [Erythrobacter litoralis HTCC2594] gi|84788258|gb|ABC64440.1| hypothetical protein ELI_11740 [Erythrobacter litoralis HTCC2594] Length = 360 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 143/342 (41%), Gaps = 7/342 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + + + F P+L + + P+Y + + A+ + + ++P+ Sbjct: 23 VTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLNGKANQAAIATLLIIFFAVLLPM 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ + + +V + + D + L + L+ ++ Sbjct: 83 IWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPSNLRNMLDAQGWGDFADLQARTQ 142 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L T I + A G L Y L+ + +F RDG I Q + G L Sbjct: 143 ELL-TQSAGLIAQQALVIGGGALGYVLAFGVGLYITYFLLRDGKGIGQAVME-GVPLQKD 200 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 ++++ ++R+T G ++ I +G + +W+ G+PS + G++ A+ +++P G Sbjct: 201 VAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGLPSVLLFGLVMAVFSLLPAIG 260 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I + +I+L G I+ + + G + + D LRP LVG +P + Sbjct: 261 PAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLRPILVGRDTGIPDWIILVTTL 320 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GG+ TMGL G+ +GP+L L W ++E+ E + +N Sbjct: 321 GGIATMGLSGIVLGPMLAGLFLAGWTI----LREHNEAVDAN 358 >gi|293605499|ref|ZP_06687881.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292816227|gb|EFF75326.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 354 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 140/340 (41%), Gaps = 7/340 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ SLY L+ F ++ A I +WP+ + V+ + ++ + ++PL Sbjct: 1 MVGSLYVLQPFLPGLIWATTIVVATWPVLLVVQQRCGGRRWAATVVMLLILLVVIVLPLY 60 Query: 80 FLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILS 137 + ++ V L + + P W+ +P G ++ W + Sbjct: 61 QVISTLAEHSGAIMDAVKRLPDYTLLAPPGWIRSVPVAGPKLAQEWQTLSDAGAGGLLAR 120 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T ++ A+ G+ + ++I+ I Y G + ++ + L Sbjct: 121 LEPYLTMAARWLLSHAAIVGVFVMHMLITIVISGI----LYSQGDAAAEFVKRFSNRLAG 176 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 R+ +R+ LG+ + A+ + + G W+AGVP+ L + ++ + G Sbjct: 177 ERGVAAVRLAGAAVRAVALGIVVTAVVQSALGGVGLWIAGVPAAGILTALMVMLCLAQLG 236 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + I+L A L +W A+ + ++D LRP L+ + L L G++ Sbjct: 237 PFLPMLGGVIWLFQNDMRLAAILLLVW-ALIVAMLDNLLRPMLIKRGVNLSLLLILSGVL 295 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GG+ G++GLFIGPV++A+ + + K I + ++ Sbjct: 296 GGMFAFGIVGLFIGPVILAVTSTLLKAWIDEVPPPASTVA 335 >gi|42523150|ref|NP_968530.1| putative permease [Bdellovibrio bacteriovorus HD100] gi|39575355|emb|CAE79523.1| putative permease [Bdellovibrio bacteriovorus HD100] Length = 371 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 144/355 (40%), Gaps = 8/355 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M T + ++ + M ++ SL+ L F ++ A +I +W + Sbjct: 1 MAPTTDLTKTLLSVLFMGLLAAISLWVLLPFLPAMIWAAMIFIATWSTLLKLQHRFNNKR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPG-GM 117 + + + L I+PL + + +VS + LAN P P WL D P G Sbjct: 61 FPAVLTMALLMTALVIIPLTAALFSLISNRHVIVSGLQDLANTQLPPAPDWLEDAPLLGP 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + W + + I ++I M+ + L+II I F Sbjct: 121 RIAARWNELAATAPQDLIERAKPYIHQAFEWIVASVGSITMLVVHCILTIIIASI----F 176 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y +G I+Q +L L ++ ++ + +R+ +G+ A+ + + G LAG Sbjct: 177 YSNGEKIAQACRTLTRRLAGTRGEEALQLAAQSVRAVAMGIVGTALIQTALGGLGAGLAG 236 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP L + I ++ G + +L + T L W A+ + ++D +R Sbjct: 237 VPHAGLLTAVILIFCVVQLGPLLPLLGAVAWLYSQEQNTAGTILLGW-AVAVGLMDGFVR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P L+ LP + G++GG+ + G++GLFIGPV++A+ + + E Sbjct: 296 PILIKRGADLPAVLITVGVLGGMISFGIVGLFIGPVVLAVTLRLLSAWMTDNSEP 350 >gi|323136904|ref|ZP_08071984.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322397665|gb|EFY00187.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 386 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 140/350 (40%), Gaps = 7/350 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I ++I F+ + ++ F A ++ ++++ P++ A + T++ Sbjct: 26 SIRLFVIGFLAYWTFIIIQPFAAMIVWSVVLAVAFDPVFEKVSGWLGGRPILAAALMTIA 85 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLS 128 + L I P+ ++ + +K +++ + P P + D P G W W + Sbjct: 86 GLVLIIGPVTWMGVGVIDPLKGVLAGFENGDLSVPPPPEAVKDWPLIGDWLFSYWELAST 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LK G +++ A G+ L + LS+ F G + + Sbjct: 146 NIHGALAQILPQLKPVG-EYLLAGARNAGLGTLKFLLSVALAG----FLLASGPQLLVGI 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + P K + I + G+ +++ + ++ G LAGVP L + Sbjct: 201 RALARRIDPTNGDKFVNLAGDTINAVSRGVMGLSLMQAVIGGLGMSLAGVPGASLLTLAI 260 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ ++ G + V + A L + + +D L+PFL+ + P Sbjct: 261 LVLGIVQIGPLLIVAPVIFWAWTHMTTGPALALTI-CMATVNYMDNVLKPFLLAHGLSTP 319 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F G++GGV G+ GLF+GPV++A++ + K I + ++ Sbjct: 320 MGVIFIGVIGGVLAHGVAGLFVGPVVLAVVWELGKAWIADDLDETRNDAA 369 >gi|237809884|ref|YP_002894324.1| hypothetical protein Tola_3150 [Tolumonas auensis DSM 9187] gi|237502145|gb|ACQ94738.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 356 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 150/350 (42%), Gaps = 6/350 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I +++ I+ + + F L A+I+ +W ++ ++ A++ Sbjct: 9 TQTLIALLLLVSIVGAAFIVIAPFLVATLWAIILVSATWDQFAWLSARFGGRDGVAAMLV 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWASELWT 124 +M +VPL+F ++ L + + G+ +P+WL D+P + Sbjct: 69 VTILMLFIMVPLVFASVEFAQQLTVLARDLQHQIESGVWPALPQWLLDVPYAGEWLQAEW 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + L T + A FG L +S++ + Y G +I Sbjct: 129 LGLQQLDMQVLNQLKGLVTPLAKIMLSMAGSFGAGMLMLLISLLIAGV----LYAHGETI 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + P ++ + IR G AI +G Y LAG+P ++L Sbjct: 185 HRWVLAFSHKVAPKEGIRLLHVAHTTIRGVVNGFIGAAIAQGAFAWFGYALAGIPHALSL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+ T+++++IPGG + +L +G++ A + +W + +D ++ ++G Sbjct: 245 GLATSLISVIPGGPMLLSIPAIGWLYQQGSVGWAIFVAVWILFAVGSIDNVVKSLVIGRS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP + FG+ GG + GLLG+F+GP+L+AL+ + K + A + + Sbjct: 305 SPLPIVLILFGVAGGAISFGLLGVFLGPILLALVYALLKNWVNADEAADQ 354 >gi|153835384|ref|ZP_01988051.1| putative permease [Vibrio harveyi HY01] gi|156975685|ref|YP_001446592.1| hypothetical protein VIBHAR_03420 [Vibrio harveyi ATCC BAA-1116] gi|148868086|gb|EDL67255.1| putative permease [Vibrio harveyi HY01] gi|156527279|gb|ABU72365.1| hypothetical protein VIBHAR_03420 [Vibrio harveyi ATCC BAA-1116] Length = 361 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ F K +++++ V + + ++PLLF+F + Sbjct: 29 VEPYINSIVMAFIISLLMFPIHEWFERKLPNHKNLVSLLSCVVLTFIIVIPLLFVFAAIV 88 Query: 87 LEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V I W+ + G +E PQ++ F Sbjct: 89 QQGSVFSQNTYKWVSNGGIQDIFQHPWV--VKGLALVNEYLPFDKIEPQAIAEKIGQFAT 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + + A G ++ + M+ LFF RD I + + L + K Sbjct: 147 SFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISAMRHILP-LSRSQEDK 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 I + +V +S +G + AI +G G WLAG P + G + + IP G + Sbjct: 205 ILTEIEQVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTMMGFASFIPVVGTALI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL + G+ A L +W + + +D LRP L+ G + L FF L+GG+ Sbjct: 264 WIPAAAYLFLTGDTTWAIFLTVWSVLVVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLH 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL+GL GP++ A+ V++ K+ Sbjct: 324 LFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 353 >gi|239906620|ref|YP_002953361.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239796486|dbj|BAH75475.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 370 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 146/361 (40%), Gaps = 11/361 (3%) Query: 1 MRETMLNPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M + + +I+ + ++ L F ++ +++ P+ Sbjct: 1 MNQARKPIYSVFLLLILAGALSLAAIVLAPFVNILIIGVVLAALFRPVQRRVERLCGPRP 60 Query: 60 TFLAVIATVSVMCLFIVPLLF----LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 T A++ T + I+P+ F L G+ + L +++ + + + +S P Sbjct: 61 TLAALLTTGLIFTCIIIPIFFFLGSLLAQGVQSVNALQAQLAATDFNKLFSHEAIS--PY 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 W E +L+ KT G I G +F+ ++ + ++ LF Sbjct: 119 MDWVQEHLPFLDLKKLALQADLIDISKTAGQMLIDSGTKIIGNVFV-LTMNFVILMFVLF 177 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F RDG + Q+L L L +I R + V +S LG IA+ +GL G ++ Sbjct: 178 FLIRDGERMMQRLRYLLP-LTTDQENRIFRQLDDVAKSVILGAFFIALAQGLAGGIGLFI 236 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+ G + ++IP G I + V+IYL++ G+ L WGA+ + +D Sbjct: 237 VGI-KPFFWGCMMGFASLIPVVGTAIIWLPVAIYLMLTGHWQWGLFLMGWGAVVVSGIDS 295 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +RP L+ + F ++GG++ G LG+ GP+++ V+ + E Sbjct: 296 IIRPLLMQNRSNMSTFWVFLSIIGGIKFFGALGILYGPLILGFAMVMLTLYAEDYRHVLE 355 Query: 355 K 355 + Sbjct: 356 E 356 >gi|254230483|ref|ZP_04923858.1| putative permease [Vibrio sp. Ex25] gi|262393362|ref|YP_003285216.1| putative permease [Vibrio sp. Ex25] gi|151936989|gb|EDN55872.1| putative permease [Vibrio sp. Ex25] gi|262336956|gb|ACY50751.1| predicted permease [Vibrio sp. Ex25] Length = 361 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 75/346 (21%), Positives = 146/346 (42%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ + ++ A II +P++ F K + A+++ V Sbjct: 12 RVLMVALLAAAFACYLLVEPYINSIVMAFIISLLMFPVHEWFERKIPKHPNMAALLSCVV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKH 126 + + ++PLLF+F + + +G + I G +E Sbjct: 72 LTFIIVIPLLFVFAAIVQQGSVFSQNTYNWVTNGG-IQDIFQHPFVIKGLAIVNEYLPFD 130 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P+++ F + G + + A G ++ ++ M+ LFF RD I Sbjct: 131 KIEPKAIAEKIGQFATSFGSNLVAISAKILGDAT-NFLMNFFLMLFVLFFLLRDHDKIIS 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + +I + +V +S +G + AI +GL G WLAG P + G Sbjct: 190 AIRHILP-LSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YL + G++ A L +W + + +D LRP L+ G Sbjct: 248 MMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVVVGSIDNLLRPLLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L FF L+GG+ GL+GL GP++ A+ V++ K+ Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 353 >gi|218780815|ref|YP_002432133.1| hypothetical protein Dalk_2975 [Desulfatibacillum alkenivorans AK-01] gi|218762199|gb|ACL04665.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 358 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 6/299 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K F L ++++ + P++S + K + + A + + V+ L ++P L Sbjct: 29 VMKPFLTIFLVSMVLAIIAHPLHSWSLKKTKNRQSLAAGLTVIMVLLLIVLPAFILILML 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E +V + + G+ + + + E P + Sbjct: 89 ANESASVVVWINKGLESGLFTDQTVDKL--TSLQKEYLPDVKIDPIEIGKSLSGAAAWLS 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I A+ G + M+ ALF+F RDG + L L + +I Sbjct: 147 KKIISYSATAVGA-LGSTLWKFVLMLFALFYFLRDGVQALRWAMHLSP-LKQSLENEIID 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 +V RS F G + A+ +G++ G + AG+P + GV+ A +M+P G + + Sbjct: 205 CFKEVSRSAFYGTFLTAVAQGVLGGIGLFFAGLP-PLTWGVVMAFFSMVPVIGTALVWVP 263 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I L G I +A L +W + + D LRP L+ G +L L FF L+GG+ Sbjct: 264 ATILLYATGKIGSAIFLAIWCMVVVGASDNVLRPLLMRGKNELHPLLIFFSLLGGLSAF 322 >gi|332188283|ref|ZP_08390010.1| hypothetical protein SUS17_3412 [Sphingomonas sp. S17] gi|332011679|gb|EGI53757.1| hypothetical protein SUS17_3412 [Sphingomonas sp. S17] Length = 359 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 129/331 (38%), Gaps = 3/331 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I + + F +L A + ++ +++ A + + + Sbjct: 15 LFLALITIALTAVISSFLIALLWAALAAILFRSLFQWLLAQTGGRRNLAAGLTMLIITFA 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +VP L + + + + K+ + + D + + + L Sbjct: 75 VVVPTLLIGSMVVDQASGVYLKMRSGQIDFAQYFQQIRDALPTRLRQAMDNSGVGSLEGL 134 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L ++ I A G + L+ + FF RDG + Sbjct: 135 QSRISRTLSSSVSQ-IATQALSIGRNAFAFALTFGVGLYIAFFLIRDGERLGPAFVRALP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L ++ V+R+T G I+ + +G + +W+ G+P+ + GV+ AI A+ Sbjct: 194 -LEQGVAARLVETFVAVVRATIKGSVIVGLVQGALGAITFWIVGLPAALLWGVLMAIAAL 252 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G I + V++YLL G I+ + + G + + + D LRP LVG LP Sbjct: 253 LPAIGPAIIWGPVAVYLLATGAIWQGAVVIVSGVLVIGLADNILRPILVGRDTGLPDWIV 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ +GL G+ +GPV+ AL W+ Sbjct: 313 LLTTLGGIEVLGLSGIVVGPVVAALFLAGWR 343 >gi|78188186|ref|YP_378524.1| hypothetical protein Cag_0203 [Chlorobium chlorochromatii CaD3] gi|78170385|gb|ABB27481.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 362 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 151/360 (41%), Gaps = 6/360 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M Q I+ +++ I + ++ F V+ A I + P+Y+ F + Sbjct: 1 MSNNHSTNQRILLLLLLVISALFFTMIRYFLLVVVLAAIFSALAMPVYNRFERGLRGKRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ ++++ + ++PL L + + L + V Q + P S Sbjct: 61 LSAIMTLLTLLFIVVLPLAILLGLVVKQAIRLSNVAVPFVQEQLLTPSQFDH----HLQS 116 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L + + + L T + S F + + + +FFF RD Sbjct: 117 LFFYPELVLYREEILQKVSELATKFGTLLFNAISSFTYSAVTEIVLFFVFLYTMFFFLRD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q + +L L ++ V R+T G ++ + +G + G A ++AG+ S Sbjct: 177 GKQMLQSMLALLP-LSHTDQYRLLDKFLSVTRATLKGSLVVGMVQGSLAGMALYMAGIES 235 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + +++IP G+ + + IYL G+ A + L+ I + +D +RP Sbjct: 236 ALFWGTVMSFLSLIPVLGSALVWIPAVIYLATIGSYPQALGVLLFCMIVVGQIDNIIRPI 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVG ++ L FFG +GG+ G G+ +GP++ AL IW+ + + I N Sbjct: 296 LVGRDTQMHELLIFFGTLGGIGMFGFFGVILGPIVAALFTTIWEMYAESFGDYLSTIQKN 355 >gi|149174467|ref|ZP_01853093.1| hypothetical membrane spanning protein [Planctomyces maris DSM 8797] gi|148846577|gb|EDL60914.1| hypothetical membrane spanning protein [Planctomyces maris DSM 8797] Length = 443 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 158/365 (43%), Gaps = 25/365 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +I+ + ++ + F P+ A ++ S P+ + FI + F A + T Sbjct: 8 TVILCLILALGIMFFKVIMPFILPLFLAAVVAMISQPLLNYFIRRTNGHVRFAAGLTTTI 67 Query: 70 VMCLFIVPLLFLFYYGMLE-----------------MKELVSKVVLANQHGIPVPRWLSD 112 ++ ++PL + G L+ ++ + KV ++N W + Sbjct: 68 IVSAILIPLCVGIFLGSLQLFTTIVNTLDEANWNKTVQTIREKVEISNDKFQQFVDWSHE 127 Query: 113 IPGGMWASELWTKHLSHPQS----LKILSETFLKTNGIDFIPRFASRFG--MIFLDYCLS 166 S + + P+ ++ + L + AS G ++ Sbjct: 128 YLQYDIDSLVTSGKSGEPKISEDFIRKNLQATLVPIAKRSLGVAASTVGLLGTLFSALIA 187 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I IIAL++F DG+ + + SL + Y +++ KV+R+ + + AIG+G Sbjct: 188 WIMFIIALYYFLADGYLLIESTQSLIP-VHVDYQRRLIDQFQKVVRAVVIATFLAAIGQG 246 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG 285 L A + G + ++ I +M+P G+ + + +I+L+ +G+ +A L L G Sbjct: 247 LTTAIALSIVGFDHFIVFLILATITSMVPLLGSWLIWLPCAIWLMYQGDWGSAIFLILIG 306 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + +D +R +++ KL L F ++GG++ MGL G+FIGP++ + + + + Sbjct: 307 TLVVGTMDNIIRTYVLQSDAKLHPLLAFVSVLGGLQVMGLWGVFIGPIVASCLHALIQIF 366 Query: 346 IMAIK 350 +K Sbjct: 367 NTELK 371 >gi|323495911|ref|ZP_08100979.1| permease [Vibrio sinaloensis DSM 21326] gi|323319127|gb|EGA72070.1| permease [Vibrio sinaloensis DSM 21326] Length = 361 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 10/354 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ + ++ A II +PI+ K + ++ + + + Sbjct: 13 VLITALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWIERKLPKHPNLASLFSCIVL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS-- 128 + +VPLLF+F + + V HG + + + P + L +L Sbjct: 73 TFIIVVPLLFVFAAIVQQGSAFSQNVYQWVTHGG--IQTIFEHPWVVKGLALVNTYLPFD 130 Query: 129 --HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 PQ + F T G + + A G ++ + M+ LFF RD I Sbjct: 131 TIQPQEIAQKVAQFATTFGSNLVGISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIIG 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + K+ V +V +S +G + A+ +G G WLAG P + G Sbjct: 190 AIRHILP-LSRSQEDKLLDEVEQVSKSAVMGSFLTALAQGFAGGLGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + +IYL + G+ A L +W + +D LRPFL+ G Sbjct: 248 MMGFASFIPVVGTALIWIPATIYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF L+GG+ GL+GL GP++ A+ V++ ++ + N Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQDFLSRQDQN 361 >gi|15616743|ref|NP_239955.1| putative inner membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11387270|sp|P57223|Y123_BUCAI RecName: Full=UPF0118 membrane protein BU123 gi|25307062|pir||A84944 hypothetical protein yb1688 [imported] - Buchnera sp. (strain APS) gi|10038806|dbj|BAB12841.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 360 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 139/345 (40%), Gaps = 7/345 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 + ++ LFI+P+ FL + ++ + N +P WL +IP G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGS-NDLELPELAWLQNIPLMGRKIFNSYQ 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ I + +F G+ + L + F + Y +G I Sbjct: 129 TLLNSDGGELIHKIRPYMGHATEFFIIQVRNCGLFIVHSILMLFFSAL----LYWNGEKI 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 185 SISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I +I G I+L + T L +W +FI+D LRPF + Sbjct: 245 MIIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP L T G++GG+ T G++GLFIGPV++ + + I I Sbjct: 304 ADLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWIYGI 348 >gi|328954356|ref|YP_004371690.1| protein of unknown function UPF0118 [Desulfobacca acetoxidans DSM 11109] gi|328454680|gb|AEB10509.1| protein of unknown function UPF0118 [Desulfobacca acetoxidans DSM 11109] Length = 409 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 149/352 (42%), Gaps = 2/352 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I+ S +K + + AL++ F S P+Y + + + + + Sbjct: 40 KTFFGVLTVVILYFSYLIVKPYLVEIFLALVLFFISKPLYQAILGFCRGWRGISSALTCL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I+P+L L + +L + + G + ++ ++ Sbjct: 100 LLALFIILPILMLAGIIASQALDLYNLISAGLHSGTLWQVLTKKLAFLEDYAKHLNLPVN 159 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + FI + F + S++ ++ FF + +G ++ Sbjct: 160 LENLKIEEVIRTALISASQFIYNNSIGLVKGFTTFLFSLLLILFITFFCFLEGDDFIDEI 219 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L L A+ +I V IR+T G I+AI +G++ G ++ GVP G + Sbjct: 220 KRLSP-LDQAHNDEILGDVENTIRATIRGTVIVAIIQGILGGLGFFCFGVPRAAFWGTVM 278 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++IP GA I + +++L +G+I+ + + LWG + + +D ++P+L+ G + Sbjct: 279 IPASVIPVIGAAIIWLPAALFLFFQGHIWQSLGMVLWGGVFIGSIDNLVKPYLMKGARQT 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P + T F ++GG+ G++G +GP++++ + + + I + SN Sbjct: 339 PTIFTLFAIMGGITYFGMIGFILGPLILSFLLSVLEIYRKTILIRSQTPPSN 390 >gi|269966936|ref|ZP_06181008.1| putative lipoprotein [Vibrio alginolyticus 40B] gi|269828419|gb|EEZ82681.1| putative lipoprotein [Vibrio alginolyticus 40B] Length = 361 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 146/346 (42%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ + ++ A II +PI+ F K + A+++ V Sbjct: 12 RVLMVALLAAAFACYLLVEPYINSIVMAFIISLLMFPIHEWFEQKIPKHPNMAALLSCVV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKH 126 + + ++PLLF+F + + +G + I G +E Sbjct: 72 LTFIIVIPLLFVFAAIVQQGSVFSQNTYNWVTNGG-IQDIFQHPFVIKGLAIVNEYLPFD 130 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P+++ F + G + + A G ++ ++ M+ LFF RD I Sbjct: 131 KIEPKAIAEKIGQFATSFGSNLVAISAKILGDAT-NFLMNFFLMLFVLFFLLRDHDKIIS 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + +I + +V +S +G + AI +GL G WLAG P + G Sbjct: 190 AIRHILP-LSRSQEDRILTEIEQVSKSAVMGSFMTAIAQGLAGGIGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YL + G++ A L +W + + +D LRP L+ G Sbjct: 248 MMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVVVGSIDNLLRPLLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L FF L+GG+ GL+GL GP++ A+ V++ K+ Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 353 >gi|260775444|ref|ZP_05884341.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] gi|260608625|gb|EEX34790.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] Length = 361 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 77/354 (21%), Positives = 148/354 (41%), Gaps = 10/354 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ + ++ A II +PI+ ++ ++++ + Sbjct: 13 VLIVALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWIENRMPNHRNIASLLSCTLL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS-- 128 + ++PLLF+F + + V HG + L + P + + +L Sbjct: 73 TVIIVLPLLFVFAAIVQQGSAFSQNVYQWVTHGG--IQALFEHPWVVKGLSIINTYLPFD 130 Query: 129 --HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 PQ + F + G + + A G ++ L+ M+ LFF RD I Sbjct: 131 EIQPQEIGQKVAQFATSFGSNLVGISAKILGDAT-NFLLNFFLMLFVLFFLLRDHDKIIA 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + K+ V +V +S +G + AI +GL G WLAG P + G Sbjct: 190 AIRHILP-LSRSQEDKLLDEVEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP G + + + YL + G+ A L +W + +D LRP L+ G Sbjct: 248 MMGFASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLTIWSVAVVGSIDNLLRPLLMQGSA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF L+GG+ GL+GL GP++ A+ V++ ++ ++ N Sbjct: 308 GMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQDFLDEQDQN 361 >gi|297518809|ref|ZP_06937195.1| putative inner membrane protein [Escherichia coli OP50] Length = 318 Score = 175 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 116/307 (37%), Gaps = 7/307 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++Q + Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSAL----LYWRGEQVAQGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 TRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ G I+L G+ T L +W + +D +RP L+ LP + Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADLPLILI 311 Query: 313 FFGLVGG 319 G++GG Sbjct: 312 LSGVIGG 318 >gi|330994841|ref|ZP_08318763.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758102|gb|EGG74624.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 331 Score = 175 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 153/334 (45%), Gaps = 6/334 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++L S + + F I+ T++P+Y + + + +IA L + P Sbjct: 1 MVLLFSAWIEQSFLFAFAWGGILSITTYPLYRRLVQRGMGNGLAAGLIAAAIFALLAV-P 59 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKIL 136 ++ + +E+ L++ A GIP+ ++ IP G + LW +LS P+ L+ Sbjct: 60 MIAMAVRAGMELPSLMAWGRGALHDGIPLSPQVAAIPHIGPRLAGLWRHYLSDPEELRHW 119 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + F +D + + ++++F+ ++ + ++G Sbjct: 120 TAVASRM----FATGDGRELPHRVMDMTETFVIATLSVYFYLAASRTLQADIRAVGSRFL 175 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A + + R +R T G+ ++ +G+G+++G Y++AG P L ++TA++++IP Sbjct: 176 GARARDVIRNTVGAVRGTVAGLVLVGLGQGVLVGIGYFIAGTPHPALLTLLTAVVSIIPF 235 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ A + + A + + GAI D +RP L+ G +PFL + Sbjct: 236 CGPVLLCATMLMTFAANGVTQAVIVGVIGAIAYGAGDHFVRPRLISGSTSIPFLAVLTAI 295 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +GG+ GLLGLFIGP ++A+ +W+ + + Sbjct: 296 LGGLHMFGLLGLFIGPTVIAVALSLWRTAAAEEQ 329 >gi|262274963|ref|ZP_06052774.1| putative permease [Grimontia hollisae CIP 101886] gi|262221526|gb|EEY72840.1| putative permease [Grimontia hollisae CIP 101886] Length = 360 Score = 175 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 74/339 (21%), Positives = 138/339 (40%), Gaps = 10/339 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + + ++ A I+ +P++ K A ++ + + + I+P++F+ Sbjct: 27 LIAPYIGSIVLAFIVSLLFFPLHDRIEQKLPSHPNVAAALSCILLTVMIIIPMIFVAAAI 86 Query: 86 MLEMKEL----VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + + I W+ + + +PQ L + + + Sbjct: 87 LGQGVTFFTGAYEWLTQGGAKAILDAPWVKSVLA--LVDKWLPTESINPQELVAKAASTV 144 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I + G + + ++ + M+ LFF RD I L + L + Sbjct: 145 SALSSQMIGMSSKILGDVTGVF-VNFLLMLFVLFFLLRDHEKIINTLRHVSP-LSRSQED 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPI 260 + KV +S LG + A+ +GLV G A WLAG + + G + A + IP G + Sbjct: 203 TLLDEAEKVAKSAVLGSFLTALAQGLVGGFAMWLAGF-AGLFWGTMMAFASFIPVVGTAL 261 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + YL + G A L WG I + +D LRP L+ G + L FF L+GG+ Sbjct: 262 IWVPAATYLFLIGQWEWAAFLAGWGVIVVGSIDNLLRPLLMQGNSGMNTLLIFFSLIGGL 321 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL+GL GP++ +L V+++ EK ++ Sbjct: 322 HVYGLMGLIYGPIIFSLTLVLFRMYETEFHSFLEKQDNS 360 >gi|39995960|ref|NP_951911.1| membrane protein [Geobacter sulfurreducens PCA] gi|39982725|gb|AAR34184.1| membrane protein [Geobacter sulfurreducens PCA] gi|298504973|gb|ADI83696.1| membrane protein [Geobacter sulfurreducens KN400] Length = 363 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 7/321 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++ + + F AP+ A +IG ++P+Y + A I T +V+ + Sbjct: 15 VALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELLAAGIMTPAVVITLV 74 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VP++ L ++ + E + G L+ I T+ ++ L + Sbjct: 75 VPVVGLTFFIIQEATLAYQFLERVAADGG--EAVLAKIRAHHLIHPWITRIEAYTGPLSL 132 Query: 136 LSETFLKTNGIDFIPRFASR---FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 +T + + + L II M+IALFF Y DG + +++ ++ Sbjct: 133 EIDTTFLPEVKEVAAKILGYSKEAVKNAFLFILKIILMVIALFFIYLDGERVQRRVLAII 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + ++S V +V+ + G+ + + +G + G +AG+PS V G I A+ A Sbjct: 193 P-LTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSPVLFGAIMAVCA 251 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP G + + +IYLL+ G I L +WG + +D +RPF + G KLP L Sbjct: 252 LIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFFISGKAKLPVLV 311 Query: 312 TFFGLVGGVRTMGLLGLFIGP 332 G +GG+ + GLLG IGP Sbjct: 312 IAIGGLGGLASFGLLGAVIGP 332 >gi|115376869|ref|ZP_01464091.1| putative exported protein [Stigmatella aurantiaca DW4/3-1] gi|310821801|ref|YP_003954159.1| hypothetical protein STAUR_4552 [Stigmatella aurantiaca DW4/3-1] gi|115366111|gb|EAU65124.1| putative exported protein [Stigmatella aurantiaca DW4/3-1] gi|309394873|gb|ADO72332.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 358 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 137/342 (40%), Gaps = 10/342 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 I + I++ L F PVL + P+ K + + A + T Sbjct: 11 NLIFAGLFALAIILFSRILLPFVMPVLLGGFLVVLFMPVQDFLCRKLKGRKSLCAAVCTA 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V L +VPL + + E+ +L++ + + ++++P G L Sbjct: 71 TVFLLILVPLAGVGWLVGRELLQLMADLPALLERVDLRNELIANLPHG-----LGRYVRV 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P+ + G I + G + + + M +++++F+ DG + + Sbjct: 126 DPEGSETERVLLSAAAGGAAIAQHVLNMGS---ELLIDLFLMTVSMYYFFLDGRRLFAEA 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L L Y + +R V + G TI A+ +G V + GVP G Sbjct: 183 TRLVP-LDKRYIQAFAREFADVAYAIVYGNTITALVQGAVGLVGLLIVGVPHAPVWGAAM 241 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A++P GG + + + + LL+ G + T + WGA + +D +RP L G + L Sbjct: 242 VIAALVPVGGTTLVWGPIGLLLLLSGKVGEGTFVLAWGAGVVSTIDNFIRPRLCGSRMAL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L F + GG+ G++GL +GP++ A+ + + Sbjct: 302 HPLLVFLSMFGGMAVFGMMGLLVGPLIAAIFMAMVRIYRRDF 343 >gi|219682054|ref|YP_002468438.1| hypothetical protein BUAPTUC7_122 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621787|gb|ACL29943.1| hypothetical protein BUAPTUC7_122 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085867|gb|ADP65949.1| putative inner membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086437|gb|ADP66518.1| putative inner membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 360 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 9/346 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASELW 123 + ++ LFI+P+ FL + ++ + N +P WL +IP G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGS-NDLELPELAWLQNIPLMGRKIFNSYQ 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T S L ++ FI + + + I M+ Y +G Sbjct: 129 TLLNSDGGELIHKIRPYMGRATEFFIVQV-----RNCGLFIIHSILMLFFSALLYWNGEK 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 IS + L K I + + +R+ LG+ + A+ + L+ G ++GVP Sbjct: 184 ISISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWAL 243 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L +I +I G I+L + T L +W +FI+D LRPF + Sbjct: 244 LMIIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRI 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP L T G++GG+ T G++GLFIGPV++ + + I I Sbjct: 303 GADLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWIYGI 348 >gi|219681498|ref|YP_002467883.1| hypothetical protein BUAP5A_121 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471179|ref|ZP_05635178.1| putative inner membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624341|gb|ACL30496.1| hypothetical protein BUAP5A_121 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 360 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 7/345 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 + ++ LFI+P+ FL + ++ + N +P WL +IP G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGS-NDLELPELAWLQNIPLMGRKIFNSYQ 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ I +F G+ + L + F + Y +G I Sbjct: 129 TLLNSDGGELIHKIRPYMGRATEFFIIQVRNCGLFIVHSILMLFFSAL----LYWNGEKI 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 185 SISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I +I G I+L + T L +W +FI+D LRPF + Sbjct: 245 MIIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP L T G++GG+ T G++GLFIGPV++ + + I I Sbjct: 304 ADLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWIYGI 348 >gi|92116459|ref|YP_576188.1| hypothetical protein Nham_0862 [Nitrobacter hamburgensis X14] gi|91799353|gb|ABE61728.1| protein of unknown function UPF0118 [Nitrobacter hamburgensis X14] Length = 360 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 145/345 (42%), Gaps = 7/345 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +I + ++ F + ++++ +P++ A + T+ + + Sbjct: 22 LLALLIYWTFVLIRPFVPILAWSIVLTVALYPVFDLLSRLLGGRPRLAAALLTLINLGIV 81 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I P +L + +KEL ++ N P + D P G E W + S+ ++ Sbjct: 82 IGPATWLGLSALDGVKELAGQLNAGNLVVPSPPEGVKDWPLIGPNLYEFWNQASSNIRAA 141 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +LK + A G+ L + LS+ F + G + + S Sbjct: 142 LREVAPYLKPLAGVLLA-LAGNAGVGTLKFLLSVALAG----FLFPYGSQLIEAGKSFLY 196 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + P + + IR+ G+ +AI + L+ G + LAG+ S L I+++ Sbjct: 197 RIVPEQSEHFLELAGATIRAVSQGVIGVAIIQSLLAGIGFKLAGISSAGLLAFAVMILSI 256 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + GA I V I++ + + A L ++ + + ++D L+P ++ + P L F Sbjct: 257 VQVGAAIVLVPVIIWIWMDKDFTTALLLTVFLGL-VGVLDNVLKPLVMKRGLTTPTLVIF 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG G++GLFIGP++++L + I + + + S Sbjct: 316 VGVIGGTLAHGIVGLFIGPIILSLAWELTVAWIRSDRAGTASLPS 360 >gi|311087020|gb|ADP67100.1| putative inner membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 360 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 7/345 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 + ++ LFI+P+ FL + ++ + N +P WL +IP G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGS-NNLELPELAWLQNIPLMGRKIFNSYQ 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ I +F G+ + L + F + Y +G I Sbjct: 129 TLLNSDGGELIHKIRPYMGRATEFFIIQVRNCGLFIIHSILMLFFSAL----LYWNGEKI 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 185 SISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I +I G I+L + T L +W +FI+D LRPF + Sbjct: 245 MIIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCF-VFILDHILRPFFIRIG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP L T G++GG+ T G++GLFIGPV++ + + I I Sbjct: 304 ADLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWIYGI 348 >gi|260654239|ref|ZP_05859729.1| putative membrane protein [Jonquetella anthropi E3_33 E1] gi|260630872|gb|EEX49066.1| putative membrane protein [Jonquetella anthropi E3_33 E1] Length = 354 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 124/348 (35%), Gaps = 5/348 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + ++ L+ F+ + A + P+Y F S+ A + Sbjct: 11 RTERRSFLIALGLVTAAFVWLLRPFWGTLFWACALAVLCAPLYRRFQKATGWRSSPSAAV 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V I PL + + V I + ++ + + Sbjct: 71 TLAVVAVAVIGPLCLFAASFFAQATSIYRDVQSG---AIDLSQYSLRVRQSFPVVQAALT 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L S T F+ + A G L + FF RDG S++ Sbjct: 128 RLGLGGSSLSEGMTSAVLAAGRFVTQNAVSLGQGALGLFADSCLALYMAFFLIRDGGSLA 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L L +++ VIRST G ++A G++ G+ + G Sbjct: 188 EILIKALP-LGDKRERRLFETFVGVIRSTVKGNVLMAFLHGVIGAVTLGFLGMNGLLLWG 246 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V +++++P G + + +SIY+ GN L + VD LRP +VG Sbjct: 247 VAMGVLSLVPLVGTAVVWLPLSIYMASSGNWTGCFFLAGVEIAAMVGVDNVLRPAMVGRS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +++P +GG+ + GL G+ GP++ AL WK + + + Sbjct: 307 LQMPDYLVLLSTLGGLASFGLGGMIAGPLVAALFVSAWKIFMGELNDR 354 >gi|149185062|ref|ZP_01863379.1| hypothetical protein ED21_18452 [Erythrobacter sp. SD-21] gi|148831173|gb|EDL49607.1| hypothetical protein ED21_18452 [Erythrobacter sp. SD-21] Length = 357 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 3/318 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + FF P+L A++ P+Y F+++++ T A++ + ++ ++P L++ Sbjct: 29 VVLPFFQPLLWAVLAAILFQPLYRWFLTRRKGRETQAALLTLLVILLAVVLPALWIGSAV 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E L + + L L ++ + F++ + Sbjct: 89 VAEATRLFLAFRDGQIDVAMYFEQVFSALPANIQASLDRAGLGDLGEVQAQATEFVQAS- 147 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + A G + L + FF RDG +IS+Q+ + +++ Sbjct: 148 LGLIAQQALAIGGSVFGFVLGFAIALYVGFFLLRDGRAISEQMLAALPFERGI-ADRLAE 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 ++R+T G ++ + +G + +W+ G+PS + LGVI AI +++P G I + Sbjct: 207 RFLVLVRATIKGSVVVGLVQGALGAFTFWIVGIPSVLLLGVIMAIASLLPAVGPAIVWVP 266 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +IYLL G I+ + + G + ++D LRP LVG +P +GG+ G Sbjct: 267 AAIYLLATGAIWQGVVVIVSGVAVIGMIDNVLRPILVGRDTGIPDWLILITTLGGIALFG 326 Query: 325 LLGLFIGPVLMALIAVIW 342 L G+ IGP++ L W Sbjct: 327 LSGIVIGPLVAGLFLAGW 344 >gi|322419533|ref|YP_004198756.1| hypothetical protein GM18_2017 [Geobacter sp. M18] gi|320125920|gb|ADW13480.1| protein of unknown function UPF0118 [Geobacter sp. M18] Length = 354 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 135/336 (40%), Gaps = 7/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I++ P+ LIIG + P Y+ + + A ++V F++ Sbjct: 16 VGAIVLFAMLAAPVIKPLAWGLIIGIATMPHYNRLLHRSPAHPGRCAGAMVLAVAVCFVL 75 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 P+ L + E + L + P + L + + Sbjct: 76 PVTALVITAAVNAPEWYKQAEQLVTTLTRSGTAAMGQFPYAQNLTSLVDRFGIDLAGIGG 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I A+ +++ +++ + LFF YRDG + Sbjct: 136 K----IAASSSGIILGLAADLARNMMNFIGTLLIALFILFFIYRDGDRVVSLCIGRLAP- 190 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 P ++ + + + + +G + +G + G YW+A VP+ + G +TAI A+IP Sbjct: 191 DPRKAQRFATEIRSITTAVVVGTVLTCAAQGAIAGVGYWVADVPAPIFFGTLTAIAALIP 250 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I + ++ ++ + G+ A L W I + D +RP +G + L Sbjct: 251 VVGTAIIWVPLAGFMALSGSYLTAALLAGWCLIFVGFADNAIRPLAIGASSDISTLAVVL 310 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G + G +MGLLGL +GPV+ A++ +W +++ ++ Sbjct: 311 GAICGAMSMGLLGLIVGPVIFAILFSMWDDAVAEVE 346 >gi|303246658|ref|ZP_07332936.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491998|gb|EFL51876.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 371 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 137/345 (39%), Gaps = 10/345 (2%) Query: 14 WMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ I+ +LY L+ F ++ +++ P++ + + T A+I T Sbjct: 11 AFLLIILAAALYLAYVVLRPFVDILIIGVVLSALFRPVHRRIDAFCGKRPTVSALITTCL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I+P+ F + + + V + A+ + + S + + L Sbjct: 71 IFTCLIIPVFFFLGSLVTQGVQSV-NALQAHLSSMDFNAFFSHEAVAPYINWLHEHLPFL 129 Query: 130 PQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L L N + + F ++ + +I LFF RDG ++ + Sbjct: 130 DVKKLALRADLLSISKNAGQILLNSGTTIIGNFFVLTMNFVILIFVLFFLIRDGEAMLAR 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L L +I R + V +S LG +IA+ +G G ++ G+ G + Sbjct: 190 VRYLLP-LSTDQEDRIFRQLDDVAKSVILGAFLIALAQGAAGGLGLFIVGIQ-PFFWGCM 247 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++IP G I + V++YL++ G L WGA+ + +D +RP L+ K Sbjct: 248 MGFASLIPVVGTAIIWLPVALYLIVTGQWQWGVFLIAWGALVVSSIDSIMRPILMRNRSK 307 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + F ++GG++ G LG+ GP+++ V+ Sbjct: 308 MSTFWVFLAIIGGIKFFGALGILYGPLVLGFAMVMLSLYAEDYSH 352 >gi|300115131|ref|YP_003761706.1| hypothetical protein Nwat_2608 [Nitrosococcus watsonii C-113] gi|299541068|gb|ADJ29385.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 360 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 4/338 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ V L + + VL A+I +P+Y+ + K ++ + Sbjct: 14 KIFIMLLLISILAVFLVMIHEYIIAVLLAIIFTAMLYPVYAWILKKFHGKQVLSSMTTLL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +PLL L E ++ + + IP +S + + Sbjct: 74 LAILMIGLPLLGLLGAVAAEAIQVSDTIGPWIEKKIPDQN-VSSLHEFPQWLPFADQLEP 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + F G FI S+ + + + M+ A+FFF+ G L Sbjct: 133 YRTRILAKVGEFAGNAGA-FIASGISKATQGTIGFIVKFFIMLYAMFFFFIWGPDSLINL 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L I V ++T G+ II + +G ++G A+W+AG+ + G IT Sbjct: 192 IRYLP-LTEKDRSHILEKGLSVTKATLKGILIIGVLQGTLVGLAFWIAGIKGAIFWGTIT 250 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ IPG GAP+ + IYLL I A + LWG I + VD LRP +VG K+ Sbjct: 251 VVLSAIPGLGAPVVWIPAVIYLLATNQIGWAIGMTLWGIIIVGSVDNILRPRIVGSETKM 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L +GG+ G++G+ +GP++ AL+ + Sbjct: 311 PDLLILLATLGGILMFGMVGVIVGPIIAALLITVLDIY 348 >gi|189347655|ref|YP_001944184.1| hypothetical protein Clim_2181 [Chlorobium limicola DSM 245] gi|189341802|gb|ACD91205.1| protein of unknown function UPF0118 [Chlorobium limicola DSM 245] Length = 376 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 73/350 (20%), Positives = 149/350 (42%), Gaps = 6/350 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ I + ++ FF + A I S PIYS + + + Sbjct: 23 KVVLLLIVFVISALFFAMIRYFFMAIFLAAIFSALSMPIYSRIERFVRGRKNLSSALTMI 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S+ + +P + ++ + V Q + P + M S + + L Sbjct: 83 SLFIMVFLPFTAVMGIVAVQAVNISRAAVPWIQAQLKEPATYNT----MLQSFPYYRELE 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L F+ S + ++ + + +FFF +DG + +++ Sbjct: 139 LYREEILQKAAELAGTAGTFLFNSLSSITVTAMNELFLMFIFLYTMFFFLKDGRLLLEKI 198 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ V R+T G ++ + +G V G A LAG+ S + G I Sbjct: 199 MYYVP-LDESDQYRLLDRFLSVTRATLKGTMVVGLIQGSVAGLALHLAGIESALFWGTIM 257 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++++++P G P+ + +IYL + G+ A +FL+ +I + +D LRP L+G ++ Sbjct: 258 SVLSVVPVLGPPLVWLPAAIYLAVTGHYTEAAAVFLFCSIIVSQLDNVLRPILIGRDTQM 317 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L FFG +GG+ GL G IGP++ AL +W+ + +++ Sbjct: 318 HELMIFFGTLGGLGLFGLFGFIIGPIVAALFITVWEIYGETFSDYLQEVK 367 >gi|222053456|ref|YP_002535818.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221562745|gb|ACM18717.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 360 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 121/328 (36%), Gaps = 7/328 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+ ALIIG + P Y+ + A + ++V F++P+ L Sbjct: 32 PLAWALIIGIATIPYYNRLTQRIPNRPGRCAGLMVLAVTVCFVLPIAGLITTIAQNAPAW 91 Query: 93 VSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L L IP + L K S + I Sbjct: 92 FQTAQGLVRDFATSGSTILHRIPFIDRITSLVEKSGIDVGGYAAKSAGPISGG----IVN 147 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ + ++ + LFF YRDG + + ++ + Sbjct: 148 AATNMAKGLAELMFILVVALFILFFVYRDGERVMSTAVTRFAP-DGNNMRRYLSRIRATT 206 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 + +G + +G++ G Y+ A VP+ V +T++ A++P G I + ++ Y+ Sbjct: 207 TAVAVGTLFTCLVQGIIAGIGYFFADVPAPVLFAGLTSVAALVPVVGTAIIWVPLAAYVA 266 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 KG A L LW + + D +RP VG +P G + GV T+GLLGL + Sbjct: 267 FKGAYVTAGLLALWCVFMVGLADNAIRPIAVGAKGNVPVPAVVLGAICGVTTIGLLGLIL 326 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISS 358 GP++ A + +W E + + Sbjct: 327 GPIIFATVINLWHELATVERSETAQGEE 354 >gi|254503591|ref|ZP_05115742.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222439662|gb|EEE46341.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 367 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 131/344 (38%), Gaps = 7/344 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ SL + FFA +L A+++ +P Y+ K A I T Sbjct: 27 DIAIRLGVLGVFAYFSLQLVAPFFAFLLWAVVLTVALYPAYAWLTGKLGGRKVLSATILT 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + + I P+ L + ++ V P+P L+++P G +E W Sbjct: 87 LIGLGIVIGPVAVLVVSLVETLQRFYEGVTSGAISVPPLPPKLAELPMVGEKIAEFWQLA 146 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + G + AS G + I II + G +++ Sbjct: 147 SQSLEQFLTKIGPMVAPAGTKILSVLASLSGSVLF-----FIVSIILSGCLFVPGPALAS 201 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + IR+ G+ +A+ +GL+ G VP L Sbjct: 202 GAKRFADRIIAPRGGEFVDLAGATIRNVSRGVIGVAVIQGLLTGVILIAFAVPLAGLLTF 261 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ +I G + I+ + A LF + + +VD LRP L+ + Sbjct: 262 AALILCIIQIGPALVILPTIIWTWSSWELLPAL-LFTVLIVPVMLVDNVLRPILMSRGLD 320 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P L G++GG GL+GLF+GPV++++ + + A + Sbjct: 321 VPMLVILIGVLGGTLAYGLIGLFLGPVILSVFYELVIAWVKAGE 364 >gi|302038875|ref|YP_003799197.1| hypothetical protein NIDE3589 [Candidatus Nitrospira defluvii] gi|300606939|emb|CBK43272.1| conserved membrane protein of unknown function DUF20 [Candidatus Nitrospira defluvii] Length = 360 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 9/354 (2%) Query: 6 LNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N Q I ++L LY + F PVL A+I+ +P++ + + Sbjct: 1 MNRQQIFALCFFGVLLALLYQMGLMFRPFVFPVLWAVILAHLCFPLHIRLTAWLGGRESH 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG--IPVPRWLSDIPGGMWA 119 AV+ T++ + L +VPL+ L + E V G +P LS +PGG Sbjct: 61 SAVLLTLAALALVVVPLVVLSVMLVKEAGSADRAVREWIASGGVQQLPDRLSGLPGGHLV 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + L+ + KT FI S + M+ LFFF++ Sbjct: 121 REWLERFTGRESDLEQFVLSSAKT-FSRFIVGELSDLVRDVFMLVADFLVMMFTLFFFFK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG L +L L ++ KI + + IR+ G+ + AI +GL+ G AY + GVP Sbjct: 180 DGRHWLASLYALIP-LEASHKDKILARLDQTIRAVVKGIVLTAIAQGLLAGVAYAVLGVP 238 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L +T ++A +P GG + + V++YLL G + + WG + +D+ L+P Sbjct: 239 FPMVLMALTILLAPLPFGGTALIWGPVALYLLWAGAVGKGLVMLAWGIGVVSTIDQILKP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G ++P L F ++GG+ G+LGLF+GP+L+ L + +++ Sbjct: 299 LFIGQGAEIPVLLLTFSVLGGLAVYGILGLFLGPILVGLFLTALQIYRDDYQQH 352 >gi|71279220|ref|YP_271255.1| hypothetical protein CPS_4608 [Colwellia psychrerythraea 34H] gi|71144960|gb|AAZ25433.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 370 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 129/352 (36%), Gaps = 7/352 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I + IIL ++ F + A I+ +P++ + + + + I Sbjct: 19 DIAIKLAAMAMIILWCFSIIRPFILITIWAAILAVALYPLHEKLTAALKGNKKLASTIVA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + + +P + L + + + + + + + P G W Sbjct: 79 IVGISIIAIPSINLSSSAIDSAQHVYTGIEEGTLKIPAADESIKEWPLVGEKLFNFWQDA 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 Q + LK+ + A G L + +S+I ++ F + Q Sbjct: 139 SQDIQKVAGQYPEQLKSLSSTLLSAVAG-IGGGILQFIVSLIIAVV----FMAKSAPLHQ 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L L + + IRS G+ +A+ + L+ G +A +P + Sbjct: 194 GLSKLMRRLMNDFGDRTISTTIATIRSVATGVLGVAVIQSLMSGVGLMIADIPGAGIWAI 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+A+ + ++ Y + A ++ I + D L+P +G + Sbjct: 254 AVLILAIAQLPPILILGPIAAYYFSVADTTPAIAFLIFS-IIVSASDAFLKPLFLGRGMS 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P L G +GG+ G++GLF+G V++AL + + + +++E + Sbjct: 313 IPMLVILLGAIGGMLLSGIIGLFVGAVVLALGYELMMDWLSHTPKSEEDNTE 364 >gi|90414156|ref|ZP_01222138.1| hypothetical membrane protein [Photobacterium profundum 3TCK] gi|90324828|gb|EAS41361.1| hypothetical membrane protein [Photobacterium profundum 3TCK] Length = 368 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 148/353 (41%), Gaps = 8/353 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI+L Y +K F PVL II P+ + + A + Sbjct: 21 ESAIRVGLLFILLAWSYGIVKPFLIPVLWGAIIAVALMPLTVKLENMLKGKRGLSATVIA 80 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + + + VP + + ++ + S + +++IP G ++W Sbjct: 81 LIGILILTVPFVMFSISMVESVEGITSTISSGTLKIPGPTERIANIPIIGQQIFDVWQLF 140 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + L + + AS G + L + ++ F + SIS+ Sbjct: 141 STNLEKAFTKFLPQLTSG----LAMMASVVGNSIVS-ILMFVISLLISAAFMANATSISK 195 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +++L + A+ ++ + + IRS LG+ +A + ++G + G+P+ + + Sbjct: 196 SVNTLSVRIAGAHGEEWATLCTATIRSVLLGVVGVACIQAFLVGIGVFAIGLPTAGLITI 255 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + A+ A + V Y+ + AT +W + + D L+P L+G + Sbjct: 256 LVLVFAIAQLPALLVVAPVIAYVYSIHDSTTATIFAVW-TLLAGLSDNFLKPLLMGRGLD 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +P G +GG+ + G+LGLFIGPV++A+ ++ E + + E+ Sbjct: 315 IPMPVILLGAIGGMVSSGILGLFIGPVILAIWYQLFNEWMHESAKADEQEEQE 367 >gi|163803357|ref|ZP_02197234.1| hypothetical protein 1103602000583_AND4_14346 [Vibrio sp. AND4] gi|159172870|gb|EDP57710.1| hypothetical protein AND4_14346 [Vibrio sp. AND4] Length = 361 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ F K +++++ V + + ++PLLF+F + Sbjct: 29 VEPYINSIVMAFIISLLMFPIHEWFERKMPSHKNLVSLLSCVVLTFIIVIPLLFVFAAIV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH----PQSLKILSETFLK 142 + +G + + P + A L ++L PQ++ F Sbjct: 89 QQGSVFSQNTYAWVTNGG--IQDIFQHPFVVKALALVNEYLPFDKIEPQAIAEKIGQFAT 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + + A G ++ + M+ LFF RD I + + L + K Sbjct: 147 SFGSNLVAISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISAMRHILP-LSRSQEDK 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 I + +V +S +G + AI +GL G WLAG P + G + + IP G + Sbjct: 205 ILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFIPVVGTALI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + YL + G+ A L +W + + +D LRP L+ G + L FF L+GG+ Sbjct: 264 WIPAAAYLFLTGDTTWAIFLAVWSIVVVGSIDNLLRPLLMQGSSGMNTLMIFFSLLGGLH 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL+GL GP++ A+ V++ K+ Sbjct: 324 LFGLIGLIYGPLVFAVTMVLFNIYEEEFKD 353 >gi|323492023|ref|ZP_08097188.1| hypothetical protein VIBR0546_07984 [Vibrio brasiliensis LMG 20546] gi|323313752|gb|EGA66851.1| hypothetical protein VIBR0546_07984 [Vibrio brasiliensis LMG 20546] Length = 361 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 10/329 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K + +++++ + + + + PLLF+F + Sbjct: 29 VEPYINSIVMAFIISLLMFPIHEWIERKLPKHKNTVSLLSCIVLTFIIVFPLLFVFAAIV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH----PQSLKILSETFLK 142 + V HG + + + P + + L +L PQ + F Sbjct: 89 QQGSAFSQNVYQWVTHGG--IQTIFEHPWVVKSLSLVNTYLPFDTIEPQEIAQKVAQFAT 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + G + + A G ++ + M+ LFF RD I + + L + K Sbjct: 147 SFGSNLVGISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIISAIRHILP-LSRSQEDK 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + V +V +S +G + AI +G G WLAG P + G + + IP G + Sbjct: 205 LLDEVEQVAKSAVMGSFLTAIAQGFAGGIGMWLAGFPG-LFWGTMMGFASFIPVVGTALI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +IYL + G+ A L +W + +D LRPFL+ G + L FF L+GG+ Sbjct: 264 WIPAAIYLFLTGDTTWAIFLTVWSVAVVGSIDNLLRPFLMQGSAGMNTLMIFFSLLGGLH 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GL+GL GP++ A+ V++ + Sbjct: 324 LFGLIGLIYGPIIFAVTMVLFNIYEEEFQ 352 >gi|254508228|ref|ZP_05120352.1| hypothetical protein VPMS16_2375 [Vibrio parahaemolyticus 16] gi|219548845|gb|EED25846.1| hypothetical protein VPMS16_2375 [Vibrio parahaemolyticus 16] Length = 359 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 148/356 (41%), Gaps = 12/356 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ + ++ A II +PI+ K ++++ V + Sbjct: 9 VLITALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWIEKKLPNHPNISSLLSCVVL 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH- 129 + +VPLLF+F + + V HG + L + P + L +L Sbjct: 69 TFIIVVPLLFVFAAIVQQGSAFSQNVYQWVTHGG--IQTLFEHPWVVKGLSLVNTYLPFD 126 Query: 130 ---PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 PQ + F T G + + A G ++ + M+ LFF RD I Sbjct: 127 TVEPQEIAQKVGQFATTFGSNLVGISAKILGDAT-NFLMDFFLMLFVLFFLLRDHDKIIS 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + K+ V +V +S +G + AI +G+ G WLAG P + G Sbjct: 186 AIRHILP-LSRSQEDKLLDEVEQVSKSAVMGSFLTAIAQGIAGGIGMWLAGFPG-LFWGT 243 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV--GG 303 + + IP G + + ++YL + G+ A L +W + +D LRP L+ G Sbjct: 244 MMGFASFIPVVGTALIWIPATVYLYLTGDSTWAIFLAIWSIAIVGSIDNLLRPLLMQGSG 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF L+GG+ GL+GL GP++ A+ V++ K+ ++ N Sbjct: 304 NAGMSTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLDRQDQN 359 >gi|77164019|ref|YP_342544.1| hypothetical protein Noc_0491 [Nitrosococcus oceani ATCC 19707] gi|254436267|ref|ZP_05049774.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76882333|gb|ABA57014.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207089378|gb|EDZ66650.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 359 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 150/344 (43%), Gaps = 16/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ V L + + +L A+I +P+Y+ + K ++ + Sbjct: 13 KNFIMILLVSILAVFLVMIHEYLIAILLAIIFTALLYPVYAWILKKFNGRQVLSSMTTIL 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLA------NQHGIPVPRWLSDIPGGMWASEL 122 + + +PLL L E ++ + + +Q+ P+ + +P Sbjct: 73 LAILMIGLPLLGLLGAVAAEAIQISNSIAPWIEKKIPDQNASPLHEFPQWLPFADQLEPY 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T+ L+ N FI S+ + + ++ M+ A+FFF+ G Sbjct: 133 RTRILAKVGEFA--------GNAGAFIASGISKATQGTIGFIVNFFIMLYAMFFFFIWGP 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L L I V ++T + II + +G+++G A+W+AG+ + Sbjct: 185 DSLINLIRYLP-LTEKDRSHILEKGLSVTKATLKSILIIGVLQGILVGLAFWVAGIKGAI 243 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G IT +++ +PG GAP+ + IYL+ I A + LWG I + +VD LRP +V Sbjct: 244 FWGTITVVLSAVPGLGAPVVWIPAVIYLIATDQIGWAIGMTLWGIIIVGLVDNILRPRIV 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G K+P L +GG+ G++G+ +GP++ AL+ + Sbjct: 304 GSEAKMPDLLILLATLGGILMFGMVGVIVGPIIAALLITVLDIY 347 >gi|189426238|ref|YP_001953415.1| hypothetical protein Glov_3189 [Geobacter lovleyi SZ] gi|189422497|gb|ACD96895.1| protein of unknown function UPF0118 [Geobacter lovleyi SZ] Length = 361 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 169/354 (47%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T+L + +++ + L+ FL F AP+ ALIIG ++P Y + ++ Sbjct: 1 MDRTLLKTLLVFTLILLGVYLLGKIFL-PFLAPIAWALIIGIITYPAYLRLLDLLKQREA 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMW 118 + A + T++VM +F++P++ L E+ + V + G + + + P Sbjct: 60 WSAALMTLAVMLVFVLPVVSLVSVLAQEVAQAYQFVSSSVSSGGAEKLLQQWAGQPQWAP 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + + S G+ + F + + + ++FM+ LFF Y Sbjct: 120 YVDKFKTLVGGSSFSLTDSVMANSKEGLAKLLGFLTSLLANSFSFLMDMVFMLFILFFVY 179 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + L+ + L + +K+S++V V+ G + + +G++ G+AY L GV Sbjct: 180 LDGERVLLWLNRMLP-LEESLQEKLSQVVRDVLSGFIFGTLLTCLVQGILAGAAYLLFGV 238 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 PS + L V+TAI +IP G + + ++YL ++G+ A + LWG + + + D ++ Sbjct: 239 PSPLLLAVLTAIGGLIPVVGTALIWLPAALYLYLQGSAVKAVIMILWGFLAVGMSDNVVK 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P + + LP LP G +GG+ G+LG GP+L+A++ ++ + + E Sbjct: 299 PIFMSSRVTLPILPIMIGALGGLAAFGVLGAIFGPLLLAILYELYVIEPVPVAE 352 >gi|323698189|ref|ZP_08110101.1| protein of unknown function UPF0118 [Desulfovibrio sp. ND132] gi|323458121|gb|EGB13986.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans ND132] Length = 368 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 140/336 (41%), Gaps = 8/336 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ F ++ + ++ P+++ + + T+ + + ++ ++P+ FLF Sbjct: 31 GFSLVEPFMHTMIFSTVLAVLFTPVFNWALKLCKGRRTWASALTVGIIVFALVLPMAFLF 90 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + E + + G + + + L + L + ++ + + Sbjct: 91 MALISQGVESLVALNAWIAQGTY--KSFLSLEMLDKYAALVHEQLPFLRIDEVQIQAGIL 148 Query: 143 TNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +F + F + + + M+ LF+F RDG + + L L P Sbjct: 149 QYSREFAQNMLSFGTSLARDGAKLVMHFLLMVFILFYFMRDGTKMVAYIKRLSP-LKPKQ 207 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 I + +V R +G ++A+ +G G +AG+P G + A+ ++IP G Sbjct: 208 EDYIIDSLKRVARGVLMGCLLVAVLQGFAGGVGLAVAGIP-AFFWGGMMALSSLIPVLGT 266 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + YL + G A L LW I + +D LRP + ++ F ++G Sbjct: 267 GLVWVPAVGYLFLSGQWKMAIFLALWCGIFVVGIDTILRPIFMREASRVSTFYIFIAILG 326 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ + G+LG+F GP++++ + V+ + + ++ + Sbjct: 327 GIYSFGMLGIFYGPLILSFVMVMLQLYLEEYADDLD 362 >gi|114570113|ref|YP_756793.1| hypothetical protein Mmar10_1563 [Maricaulis maris MCS10] gi|114340575|gb|ABI65855.1| protein of unknown function UPF0118 [Maricaulis maris MCS10] Length = 398 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 4/336 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + + I V L+ ++ + A + A +I + K + A + Sbjct: 10 QRAFIAALALIISWVFLWMIRDYLAALFLAAVITLFLAKPHDWLSGKLGKRRGLAAGLLV 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + F++P L + ++ V Q + R + + G + + Sbjct: 70 TGAVLAFVIPAAILLGLVAEQAIDVTGMVTPWVQSQVSEIRT-NGLDGLPDWLPFRDEMI 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +L + G + + G FL L++ +I ALFFF G ++ Sbjct: 129 EYQATLTAQIGNLAGSVGRMLVNSLRAGTG-GFLVATLNLFILIYALFFFLMTGRDAARS 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L A + ++ IR+T G +IA+ +G + G ++AGVP + I Sbjct: 188 AVTLLPMTVEAR-ELLAERALSTIRATVKGSFLIALVQGGLTGVGLFVAGVPGAIFWAAI 246 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++++IP G P+ + +I+L G+ A L WGAI + D LRP LVG K Sbjct: 247 AALLSIIPMIGPPLIWAPAAIWLAATGHPVAAGGLAAWGAIVVSTSDNILRPVLVGKDAK 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L +GG+ G +G+ IGPV+ AL +W Sbjct: 307 MSDLMVLISTLGGLTLFGAVGIIIGPVIAALFTSVW 342 >gi|91228319|ref|ZP_01262248.1| putative permease [Vibrio alginolyticus 12G01] gi|91188135|gb|EAS74438.1| putative permease [Vibrio alginolyticus 12G01] Length = 347 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 8/340 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ ++ + ++ A II +PI+ F K + A+++ V + + + Sbjct: 4 LLAAAFACYLLVEPYINSIVMAFIISLLMFPIHEWFEQKIPKHPNMAALLSCVVLTFIIV 63 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQS 132 +PLLF+F + + +G + I G +E P++ Sbjct: 64 IPLLFVFAAIVQQGSVFSQNTYNWVTNGG-IQDIFQHPFVIKGLAIVNEYLPFDKIEPKA 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + F + G + + A G ++ ++ M+ LFF RD I + + Sbjct: 123 IAEKIGQFATSFGSNLVAISAKILGDAT-NFLMNFFLMLFVLFFLLRDHDKIISAIRHIL 181 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + +I + +V +S +G + AI +GL G WLAG P + G + + Sbjct: 182 P-LSRSQEDRILTEIEQVSKSAVMGSFMTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFAS 239 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + + + YL + G++ A L +W + + +D LRP L+ G + L Sbjct: 240 FIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVIVGSIDNLLRPLLMQGSAGMNTLM 299 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 FF L+GG+ GL+GL GP++ A+ V++ K+ Sbjct: 300 IFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKD 339 >gi|213428578|ref|ZP_03361328.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 333 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 114/281 (40%), Gaps = 8/281 (2%) Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ-SLKILS 137 L +++ + V +P WL++IP G W L ++ Sbjct: 44 ALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGSAIMAKV 103 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++ T I F+ + A+ G + L ++F + Y G ++ + L Sbjct: 104 RPYIGTTTIWFVGQ-AAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFACRLAA 158 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G Sbjct: 159 KRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLG 218 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I+L G+ T L +W A + +D +RP L+ LP L G++ Sbjct: 219 PLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLPLLLILSGVI 277 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 278 GGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 318 >gi|294101585|ref|YP_003553443.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] gi|293616565|gb|ADE56719.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] Length = 402 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 152/344 (44%), Gaps = 8/344 (2%) Query: 14 WMIMFIILVSLYFLKGF--FAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVS 69 + ++F+ L +L +L F P+ + I+ F +P Y+ K + A + T Sbjct: 41 FTVVFLALGALAYLVSFNLLRPLAWSAILSFFVYPFYTLIYEKILKKKYANIAASLTTAV 100 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L +VP +F+ E + + ++ + + + + +E L+ Sbjct: 101 IIVLIVVPSIFVGVTLAREGIRIYGHLATVLSRVNVEQGKTIMSVFFPDVLAERIRPFLA 160 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + E + + + + F + +I +++A FF RDG I + Sbjct: 161 EYPFLVNVIEQ-VGSWIASTLATLSRSFLGDTIRILYQLIVIVVASFFMIRDGHIILDYV 219 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + L + +++++ G+T+ A +G + +W G+PS G + Sbjct: 220 NDIVP-LPLKEKEAFFNRAKQILQAVIYGITLTAGVQGFLGALGWWYVGLPSPAVFGAVM 278 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A++AMIP G P+ + +IYL G I A L +WG I + +VD +RP + G K Sbjct: 279 ALLAMIPFIGTPLVWGPGAIYLFYSGQIKEALILAIWGLIVVSMVDNFIRPIFISGGGKA 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L F G+VGG+ + G LGLF+GP++++L + K Sbjct: 339 HVLIIFIGVVGGLASWGFLGLFLGPLVISLFIFLLDSYRNIWKN 382 >gi|269102539|ref|ZP_06155236.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162437|gb|EEZ40933.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 371 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 138/346 (39%), Gaps = 7/346 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ +I+ + +K F PVL II P+ + + A + + + L Sbjct: 22 LLLVLIIWTYDIVKPFIIPVLWGAIIAVALMPLTDKLQAVFKGRRGLAATVIALVCIALL 81 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I P + + + +S + + + ++DIP G E+W+ ++ + Sbjct: 82 IAPFVMVSGSIYDGITHTMSVLQSGDIKIPGPTQRIADIPVVGDKIYEVWSLFATNMEKA 141 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +KT + AS G + I + F I++ + + Sbjct: 142 VTNFLPEIKTA----VGTLASILGSSLASLVV-FIIALAVAGGFMTHSHKITEAIQKVSI 196 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + IRS LG+ +A + +++GSA + VP L + I+ + Sbjct: 197 RTVGKNGAKWTTLTAATIRSVLLGVVGVAFIQAMIIGSAMFAFHVPMAGLLTLGVLILCI 256 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 A I V Y+ G+ + T +W A+ + D L+P L+G + +P Sbjct: 257 AQLPALIVIAPVIFYVYSTGDGTSTTIFTIW-ALAGGLADNILKPMLMGRGVDVPMPVIL 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ G++GLF+G V++A+ ++ + A E + + Sbjct: 316 IGAIGGMLFSGIIGLFLGAVILAIWYELFMAWLKADAETTQAVVEE 361 >gi|302342979|ref|YP_003807508.1| hypothetical protein Deba_1546 [Desulfarculus baarsii DSM 2075] gi|301639592|gb|ADK84914.1| protein of unknown function UPF0118 [Desulfarculus baarsii DSM 2075] Length = 366 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 138/339 (40%), Gaps = 3/339 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F++ + ++ F + A+++ P+Y + + + + + + + + Sbjct: 20 ILFVLYCAYLLVEPFLTSIFLAIVLVVVGGPVYDLMLKLTRQRRGLASALTCLLFILIIV 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VPL+ + + +L + V + S + + +H + + Sbjct: 80 VPLVLITGVITSQALDLYNTVSAMLAGNSLSEMFNSGMGRLGPFLDKLEEHTGITRMDIL 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + + M+ F+ DG S++Q+ L L Sbjct: 140 QHAAEALKYVSNLLYSNLTDLLRGATNLAIGFALMMFVAFYLLMDGQSMAQKAIRLSP-L 198 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + +R+T G +A+ +G G + + GVP + G + +++P Sbjct: 199 PADTTNQIRDDILSTLRTTMRGTVFLAVIQGTAGGLGFGVFGVPHALFWGTVMVFASVVP 258 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + F YL++ G++F + +W I D LRP L+GG + L TFF Sbjct: 259 LVGTALLFIPAGTYLILSGDVFQGVGVMIWCEASQVICDNFLRPRLIGGG-NIHPLLTFF 317 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++GG+ G++GL +GP+++A++ + + ++ Sbjct: 318 SVLGGLSVFGMVGLILGPLVLAVLISLLEVYEHYFMDSP 356 >gi|90410495|ref|ZP_01218511.1| putative membrane protein [Photobacterium profundum 3TCK] gi|90328736|gb|EAS45020.1| putative membrane protein [Photobacterium profundum 3TCK] Length = 379 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 143/346 (41%), Gaps = 8/346 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI++V Y +K F PVL II P+ + A I Sbjct: 25 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALLPLTQKLEAMLGGRRGLSATILA 84 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + + L + P + + + L V + + ++DIP G E+W+ Sbjct: 85 LLGITLLVAPFVLVSGSIFDAVTHLTDVVQSGDIKIPGPTQRIADIPVIGDKLFEVWSLF 144 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +KT + AS G + I + F + S+ Sbjct: 145 STNLEKAVTHFLPEIKTA----VGTMASLVGSSLAT-LVMFIISLAIAAGFMTHSKACSE 199 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + + ++ + + IRS LG+ +A + +++G+ ++ GVP+ + + Sbjct: 200 AIGTVAVRVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQSMLVGAGMFVFGVPAAGLITL 259 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ + A I V Y+ + +AT +W + I D L+P L+G + Sbjct: 260 GVLILGIAQLPALIIVAPVIFYVFSTQDTTSATIFTVW-VLLAGISDNFLKPMLMGRGVD 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P G +GG+ G++GLF+G V++A+ ++ + ++ Sbjct: 319 VPMPVILIGAIGGMLAAGIIGLFLGAVVLAIWYELFVTWLKLDQDE 364 >gi|54302864|ref|YP_132857.1| hipothetical membrane protein [Photobacterium profundum SS9] gi|46916288|emb|CAG23057.1| hipothetical membrane protein [Photobacterium profundum SS9] Length = 365 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 149/351 (42%), Gaps = 8/351 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI+L Y +K F PVL II P+ + + A + Sbjct: 21 ESAIRVGLLFILLAWSYGIVKPFLIPVLWGAIIAVALMPLTVKLENMLKGKRGLSATVIA 80 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + + IVP + + ++ + S + +++IP G ++W Sbjct: 81 FIGILILIVPFVMFSISMVESVEGITSTISSGTLKIPGPTERIANIPIIGQQIFDVWQLF 140 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + L + + AS G + L + ++ F + SIS+ Sbjct: 141 STNLEKAFTKFLPQLTSG----LAMMASVIGNSIVS-ILMFVISLLISAAFMANATSISK 195 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +++L + A+ ++ + + IRS LG+ +A + ++G + G+P+ + + Sbjct: 196 SVNTLSVRIAGAHGEEWATLCTATIRSVLLGVVGVACIQAFLVGIGVFAIGLPTAGLITI 255 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++A+ A + V Y+ + AT +W + + D L+P L+G + Sbjct: 256 LVLVLAIAQLPALLVVAPVIAYVYSIHDSTTATIFAVW-TLLAGLSDNFLKPLLMGRGLD 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +P G +GG+ + G+LGLFIGPV++A+ ++ E + ++ + Sbjct: 315 IPMPVILLGAIGGMVSSGILGLFIGPVILAIWYQLFNEWMHESEKADSQAQ 365 >gi|254516312|ref|ZP_05128371.1| hypothetical protein NOR53_2523 [gamma proteobacterium NOR5-3] gi|219674735|gb|EED31102.1| hypothetical protein NOR53_2523 [gamma proteobacterium NOR5-3] Length = 368 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 150/344 (43%), Gaps = 6/344 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + M + + + GF +L A + ++P+YS + +T +++ + Sbjct: 13 KSFVLVMTLAYTGLFFAMISGFAMALLLAAVFSGIAYPLYSWLSNVWGGRNTLASLMTLL 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +VPL+ L + E+ +V + + + S +PG + +E + Sbjct: 73 ISLLAIVVPLMLLLGLVADQALEVAEEVTPWIEQQLDQSQEPSALPGWVPYAEELEPY-- 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F G+ ++ S + + L++ ++ A+FFF G ++ +++ Sbjct: 131 -RDRIMAKVAEFAGNAGV-YLASGLSTLTQGTMSFFLNLFVILYAMFFFLISGSALIEKI 188 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S L K+ ++ V R+T G II +G + G + +AG+ + V G + Sbjct: 189 MSYAP-LSRVDKDKMLQVGLSVSRATVKGTLIIGAIQGALGGLGFAVAGIDAAVFWGAVM 247 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+++++PG GA + + ++LLI G L W A + +D LRP LVG ++ Sbjct: 248 AVLSILPGIGATLVWAPAVVFLLISGETLVGLGLLAWSAGVVGTIDNFLRPILVGRDTEM 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P L +GG+ G+ GL +GP+L AL + + Sbjct: 308 PDLLILLSTLGGLGLFGVAGLVLGPILAALFMTVLTIYSRVFAD 351 >gi|153832184|ref|ZP_01984851.1| hipothetical membrane protein [Vibrio harveyi HY01] gi|148871495|gb|EDL70350.1| hipothetical membrane protein [Vibrio harveyi HY01] Length = 381 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 131/336 (38%), Gaps = 7/336 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + +K F PV+ II PI A + + L + PL+ Sbjct: 32 MFTYDIIKPFILPVIWGAIIAVALMPICKKLERVYGGKRGLAATTIALLGIALLVAPLVM 91 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + + + + + +++ P G E+WT ++ + Sbjct: 92 VSGSIVDGATHALEVLQNGDIKIPGPKPSVAEWPLVGDKLYEVWTLFATNLEKAIQTFMP 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +K+ + G + L I + SI+ L ++ Sbjct: 152 QIKSGLTSLLGMVGGALGSLLLSIISLAIAAGFMTY-----SESIASGLRTVAVRTAGDN 206 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 K + ++ I+S LG+ +A + L++G+ +++ GVP+ L +I I+ + A Sbjct: 207 AKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLTLILMILCIAQLPAL 266 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ V Y+ + + AT +W + + + +P L+G + +P G +GG Sbjct: 267 LAVLPVVGYMYMTNDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGG 325 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G++GLF+G V++A+ ++ + K +++ Sbjct: 326 MLFYGIVGLFLGAVILAIWYELFVWWLSIEKAQQQE 361 >gi|270157435|ref|ZP_06186092.1| putative membrane protein [Legionella longbeachae D-4968] gi|269989460|gb|EEZ95714.1| putative membrane protein [Legionella longbeachae D-4968] Length = 307 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 86/306 (28%), Positives = 155/306 (50%), Gaps = 3/306 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + II +SL+ + F ++ A II ++P+Y + A++ T + L Sbjct: 3 LTVGIIALSLFIIHRFIPSMIWASIIVIATYPLYERWRRFFGSKDDLSALLFTTLIGLLL 62 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 ++PL +L + E++ ++ + N+ G P +L + P G W ++ P + Sbjct: 63 LLPLSWLVGLLIKELQIFINFLQSLNEKGGMAPEFLKNFPWIGSDLVVYWDNNIGKPGMI 122 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K L + + + G + + F +++LFFFYRDG + Q+ +GE Sbjct: 123 KGLLSNIHLSLTPT--SYYVKQIGSNLAHRSVQVGFTLLSLFFFYRDGDRLITQIYLVGE 180 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + W + + +PK +R+T G ++ +G G ++G Y L G P+ +G ITA+ AM Sbjct: 181 NCLGKRWFRYADRLPKALRATVNGTIVVGLGVGFLMGVCYGLVGFPAPTLVGFITALAAM 240 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP PI F V++ L G++F A + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 241 IPFVVPIVFITVAMILFAFGSMFGAIAVLVWGTLVMFVADHFIKPALIGGAIELPFLAVL 300 Query: 314 FGLVGG 319 FG++GG Sbjct: 301 FGILGG 306 >gi|53802621|ref|YP_112659.1| hypothetical protein MCA0120 [Methylococcus capsulatus str. Bath] gi|53756382|gb|AAU90673.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 370 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 146/335 (43%), Gaps = 5/335 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I F+++ K F +L ++I+ P+++S + + A + ++++ Sbjct: 19 LIGFLVIYCYQIFKPFIGLMLWSVILAVAFHPMHASLARRMGDKQGRAATVLVLAILLCV 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 +VP L +LV +V + ++++ P G LW+ S+ Sbjct: 79 LVPTALLAVSFADSATDLVRQVRDGSLKVPAPRAFVAEWPLLGDKLYALWSAAHEDIGSV 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 E ++T + + +A+ G L + +S++ + + + G + ++ + + Sbjct: 139 AARFEPKIRTVTKEILG-YAASAGSAVLKFMVSLVLAGVWMAY-ASSGHAAARAIAN--R 194 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P + R+ IR+ G+ IA + L+LG+ + L GVP+ L ++ ++ + Sbjct: 195 MAGPGQGDALVRLSTTTIRAVAQGVIGIACIQALLLGAGFILVGVPAAGVLALLVLLLGI 254 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A + IY+ + + +F I VD L+PF++G + P Sbjct: 255 MQVPALLISLPTVIYVFMTDDSTIVAIMFAIYTIVAGSVDNILKPFMLGRGVDAPMPVIL 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ T G++GLF+G V++AL ++ + Sbjct: 315 LGALGGMATGGIIGLFLGSVMLALGYQLFMAWVYD 349 >gi|149196508|ref|ZP_01873562.1| hypothetical protein LNTAR_08459 [Lentisphaera araneosa HTCC2155] gi|149140188|gb|EDM28587.1| hypothetical protein LNTAR_08459 [Lentisphaera araneosa HTCC2155] Length = 363 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 142/357 (39%), Gaps = 8/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + I +I+++ + L F +L ALII +P++ K Sbjct: 8 LNKKTMMDLLIRMTLILYLSYLCLKVFAPFALLMLWALIIAIVLFPLHQKLAKKFNGKQG 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A + + + P++ L + + +++L N + + P G A Sbjct: 68 RAATVIVLLGCLIIGTPVVVLGFSMVDHVQDLYRAYESGNVQIKEPKESVKEWPIIGRKA 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +LWT + + + + + + + G + + + ++ F Sbjct: 128 HQLWTDASADFSAFLVDYKEPITSFFKKMLGAAGGAMGSVAM-----FMGALVISGFMMA 182 Query: 180 DGFSISQQLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G S + + + P +K++++ +RS G+ +A + L++G LA + Sbjct: 183 FGDRGSVAMLKIANRITGPERGEKLTKLSVMTVRSVTTGVIGVAFIQALIIGVGLILADI 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLR 297 P+ L ++ + ++ A I V IY+ G+ A F I + D L+ Sbjct: 243 PAAAILSLVVMFLGILQLPAVIILLPVIIYMWSSTGSSLAANIFFTIYFIVGSLSDNILK 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L+G + P G +GG+ GL+GLF+G L+A+ I+ + + + N++ Sbjct: 303 PMLLGRGVDAPMPVVLIGALGGMMASGLIGLFLGATLLAVAYRIFMDWVDDPEGNQK 359 >gi|118589355|ref|ZP_01546761.1| hypothetical protein SIAM614_07418 [Stappia aggregata IAM 12614] gi|118438055|gb|EAV44690.1| hypothetical protein SIAM614_07418 [Stappia aggregata IAM 12614] Length = 372 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 139/352 (39%), Gaps = 7/352 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ SL + FF ++ A+++ +P++ ++ AV+ T Sbjct: 27 DIAIRLGVLGLFAYFSLQLVAPFFLFLVWAVVLTVALYPVFGWLTARLGGRKVLAAVLIT 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + + I P+ L + ++ V P+P L+ +P G SE+W Sbjct: 87 LCCLAIVIGPVAVLVVSLVDTLQGWYHGVAGGVLKLPPLPEKLAALPVVGAKLSEIWQLA 146 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L G + AS G + I II + ++++ Sbjct: 147 GQGLEQVFAKVGPTLVPAGSRILGVLASLSGSVLF-----FIVSIILAGCLFVPAPALAK 201 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + IR+ G+ +A+ +GL+ G VP L Sbjct: 202 GAKLFADRIIAPRGSEFVDLAGATIRNVSRGVIGVAVVQGLLTGIVLIAFSVPLAGVLTF 261 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ ++ G + I+ ++ A LF + + ++D LRP L+ + Sbjct: 262 VALILCIVQIGPALVIVPTIIWAWSSWDLVPAL-LFTVLMVPVMLIDNVLRPILMSRGLN 320 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P L G++GG GL+GLF+GPV++A+ + + A ++ + ++ Sbjct: 321 VPMLVILIGVLGGTIAYGLIGLFLGPVILAVFYELVIAWVKAGEKRSAEETA 372 >gi|308271896|emb|CBX28504.1| hypothetical protein N47_G38280 [uncultured Desulfobacterium sp.] Length = 350 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 150/348 (43%), Gaps = 10/348 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ L+ + F ++ +++ P++ + ++ S A+I+TV V Sbjct: 10 LLSALLAGSFVLVLFIFQPFIYTLIFSVVFTVVFQPVHKYVLKVTKQRSGISALISTVFV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +VP++ + E ++L + + I + I E + Sbjct: 70 ITILLVPIILFGVQILNEAQQLYMSLAAGSTKKIVHETIYNLI-------EKTGRFFPAV 122 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + LK + +LK G+ + ++ + +L++ ++DG + + + Sbjct: 123 KELKFDIDLYLKE-GLGLLLSHIGGVFSNVAKLMINSFIFLTSLYYLFKDGHKLKETFLN 181 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L L + IS + I S G +IA+ +G++ + + G+P+ + G +T + Sbjct: 182 LSP-LPRNENELISNKLEGAINSVIKGNLVIALIQGVLSAAGFAFFGIPNAMFWGSVTTV 240 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IPG G + I+L + G I L +WGA + I+D L P LVG +++ Sbjct: 241 SALIPGVGTSLVLIPAIIFLFLTGKIAPGFGLLVWGAGAVGIIDNFLGPKLVGQRMQVHP 300 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + ++GG+ G +G +GP+ M+L ++ + E Sbjct: 301 MLILLSVLGGIVFFGPIGFLLGPLTMSLFFAFFEIYSAIRLDQTENTD 348 >gi|126658239|ref|ZP_01729389.1| hypothetical protein CY0110_12607 [Cyanothece sp. CCY0110] gi|126620388|gb|EAZ91107.1| hypothetical protein CY0110_12607 [Cyanothece sp. CCY0110] Length = 378 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 145/342 (42%), Gaps = 7/342 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++I ++ ++ F +L +I+ +P++ ++ V+ Sbjct: 25 IVDLLIRLFLIGLLLAWCFLLIRPFLGILLWGIILAIAVFPVFVWLKNRLGGRRKLAGVL 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + + + + P+ F+ + + +V N P P + ++P G + +WT Sbjct: 85 LILLGIAVIVGPVSFVATLFVGNAQTFADNIVSGNLKVPPPPEGIENLPIIGNYVDHIWT 144 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ S+ + L+ + + FA ++ L + LSII I + + Sbjct: 145 SASNNLISVLSKFQPQLEELAKNVLF-FAGNMSLVLLKFILSIIVAGILT----INSKQL 199 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++++ + + P + ++ IR G+ +++ + L++G +AG+P L Sbjct: 200 NRKIKRVFIRITPQQGEDFLQLATATIRGVTRGIIGVSLIQSLLVGIGLMVAGMPLSGLL 259 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V++ ++ ++ G I+ A L +W I ++D L+P + Sbjct: 260 TVLSLVLCILQIGLGPVVFPSIIFAWYTMGTLKALLLTIW-LIFCTLIDNILKPIFMSQG 318 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + +P L F G++GG G+LGLFIGPV+++L + + Sbjct: 319 VSVPILIIFIGVLGGSLLHGILGLFIGPVVLSLGYELLLAWV 360 >gi|27379781|ref|NP_771310.1| hypothetical protein bll4670 [Bradyrhizobium japonicum USDA 110] gi|27352934|dbj|BAC49935.1| bll4670 [Bradyrhizobium japonicum USDA 110] Length = 365 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 65/334 (19%), Positives = 142/334 (42%), Gaps = 7/334 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +I+ + ++ F + + ++ +P +S A I T+ + + Sbjct: 24 LLALLIIWTFLIIRPFVPILAWSGVLAVAFYPAFSWVAKILGGRPKTAAAILTLITLGIV 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I P +L + ++EL ++ + P L P G W +LW + ++ +++ Sbjct: 84 IGPATWLGISAVDGVRELAHQLGTGDLALQSAPEQLKSWPLVGPWLYDLWDQAYTNIRAV 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +L+ + FA G+ L + +S+ F + G + Sbjct: 144 LREVAPYLQPLAGPLL-SFAGDAGVGTLQFLVSVFVAG----FLFPHGPRLVAASRGFLF 198 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + P + + IR+ G+ +AI + L+ G + LA VPS L I ++++ Sbjct: 199 RIVPEQSEHFLGLAGATIRAVAQGVIGVAIVQALLAGIGFKLAAVPSAGLLAFIVLLLSI 258 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + GA + V I++ ++ A L + + + +D L+P ++G + P + F Sbjct: 259 VQIGAFLVLLPVIIWIWTAKDVTTALLLTV-FLVLVGFIDTMLKPLVMGRGLTTPTIVIF 317 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G++GG G++GLFIGP+++++ + I Sbjct: 318 VGVIGGTLAHGIVGLFIGPIILSVAWEMMMAWIR 351 >gi|163801373|ref|ZP_02195272.1| nicotinate phosphoribosyltransferase [Vibrio sp. AND4] gi|159174862|gb|EDP59662.1| nicotinate phosphoribosyltransferase [Vibrio sp. AND4] Length = 386 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 139/349 (39%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++ I+L+ Y +K F PV+ II PI A Sbjct: 19 ESAIRIGLVIILLMFTYDIIKPFILPVIWGAIIAVALMPICKKLEKVYGGKRGLAATTIA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + + L + PL+ + + + + + +++ P G E+WT Sbjct: 79 ILGIALLVTPLVMVSGSIVDGATHALEVLQNGDIKIPGPKPSVAEWPVVGDKLYEVWTLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +K+ + G + L I + S++ Sbjct: 139 STNLEKAIQTFMPQIKSGLTSLLGMVGGALGSLLLSILSLAIAAGFMTY-----SESLAS 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L + Sbjct: 194 GLSTIAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ + A ++ V Y+ + + AT +W + + + +P L+G + Sbjct: 254 VLMILCIAQLPALLAVLPVIGYMYMTKDTSTATMFTVW-VVVAALSENLFKPMLMGRGVS 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P G +GG+ G++GLF+G V++A+ ++ I K +++ Sbjct: 313 VPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWINIEKAQQQE 361 >gi|261250291|ref|ZP_05942867.1| predicted permease [Vibrio orientalis CIP 102891] gi|260939407|gb|EEX95393.1| predicted permease [Vibrio orientalis CIP 102891] Length = 363 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 143/347 (41%), Gaps = 12/347 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ + ++ A II +PI+ + ++++ + + Sbjct: 13 VLIVALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWLEKRLPNHHNITSLLSCIVL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH- 129 + +VPLLF+F + + V +G + + + P + L +L Sbjct: 73 TFIVVVPLLFVFAAIVQQGSNFSQNVYQWVTNGG--IQAIFEHPWVVKGLSLINTYLPFD 130 Query: 130 ---PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 PQ + F + G + + A G + + M+ LFF RD I Sbjct: 131 TIEPQEVAQKVAQFATSFGSNLVGISAKILGDAT-SFLMDFFLMLFVLFFLLRDHDKIIS 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + K+ + +V +S +G + AI +G+ G WLAG P + G Sbjct: 190 AMRHILP-LSRSQEDKLLDEIEQVSKSAVMGSFLTAIAQGVAGGLGMWLAGFPG-LFWGT 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV--GG 303 + + IP G + + +IYL + G+ A L +W + +D LRP L+ G Sbjct: 248 MMGFASFIPVVGTALIWIPAAIYLYVTGDTTWAIFLTVWSVAIVGSIDNLLRPLLMQGSG 307 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L FF L+GG+ GL+GL GP++ A+ V++ + Sbjct: 308 NAGMSTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQ 354 >gi|332112088|gb|EGJ12064.1| hypothetical protein RBXJA2T_17117 [Rubrivivax benzoatilyticus JA2] Length = 359 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 72/351 (20%), Positives = 137/351 (39%), Gaps = 8/351 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ SL+ LK F P + A ++ +WP+ + S Sbjct: 1 MKTADVTRTSFAVLFLAALVGCSLWILKPFVGPTIWATMVVVATWPLMLRVQAALGGSRA 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIP-GGM 117 + T+ ++ LF VPL + + P WL +P G Sbjct: 61 AAVTVMTLLLVLLFAVPLALSIATLVENADRIAQTARDLATWRPSREAPAWLLALPMVGP 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + W + ++ ++ + FG + L + L+++ + Sbjct: 121 KLAVAWEQAVAAGLEGLVVRIQPYAGGFTRWFVGEIGDFGSVALQFVLTVVIAAV----M 176 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y G Q+ + L + IR LG+ + A+ + ++ G LAG Sbjct: 177 YAQGEVFGAQVRAFAGRLAGERGVGAVTLAADAIRGVALGVGVTAVVQAVLGGVGLALAG 236 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP L + ++ + GA + ++L G++ L +W AI + +D LR Sbjct: 237 VPLAGLLTALMFMLCIAQIGALPVLLPAAGWVLYGGDVGWGVFLLVWSAI-VGTLDNFLR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P L+ LP L F G++GG+ GL+G+F+GPV++A+ + + I Sbjct: 296 PVLIRLGADLPLLLIFAGVIGGLLAFGLVGIFVGPVVLAVGFTLLESWIGE 346 >gi|332176654|gb|AEE12344.1| protein of unknown function UPF0118 [Porphyromonas asaccharolytica DSM 20707] Length = 429 Score = 168 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 115/323 (35%), Gaps = 19/323 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + + VL AL I + +K + A + TV + F++PLL + + Sbjct: 68 LPYMSGVLGALTIYVLLRGQMKWLVERKRWGRNWAASLLTVEAIFFFLIPLLGIVLMLID 127 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + N + + +++ Sbjct: 128 LFSAFDPE--SLNVLTTQAQDVVKQVEERFGIELWSNENIQ---------------KLTS 170 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + L+ ++ L+F R ++ L K +S Sbjct: 171 FSTSLVKGLLQGMSSFFLNAFIILFLLYFMLRGYDQFEAAVEELLP-FTECNKKTVSNET 229 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 +++S +G+ ++AI +G+ Y + GV + + V+T +IP G + + ++ Sbjct: 230 ISIVKSNAIGIPLLAIVQGVFAYIGYLIFGVDNALLFAVLTTFTTIIPVLGTMLVWIPIA 289 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + I G+ NA L L+G I + VD R L + L T FG+ G+ G Sbjct: 290 VVMGINGDWLNAILLALYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFW 349 Query: 327 GLFIGPVLMALIAVIWKESIMAI 349 G+ GP++++LI + Sbjct: 350 GVIFGPLILSLIVLFINLYRHDF 372 >gi|257093350|ref|YP_003166991.1| hypothetical protein CAP2UW1_1757 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045874|gb|ACV35062.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 377 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 139/347 (40%), Gaps = 8/347 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ ++L+ +F F +L ALI+ T +P++ + + + + + + Sbjct: 28 LVLALVLLCYHFFSPFLTMMLWALILAVTIYPLHEMLAGRIGGKQGLASTLIVLVAIAVI 87 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + P + L + ELV V ++ P G +W++ +L Sbjct: 88 VTPTIMLASQFGDSVHELVKGVRDNTLEVPAPSEKVAAWPVVGKKVHAIWSQAHDDLPAL 147 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + A G L + L+ I I + + G S +Q + ++ E Sbjct: 148 VKSMQPKIGELATKALGIVAG-LGGGLLMFVLAFIVAGIMMAY----GESGAQAMQAIFE 202 Query: 194 HLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +F K+ + + +R+ G+ IA + L++G + +A VP L VI ++ Sbjct: 203 RVFGLARGKEFTNLSSATVRAVASGVIGIACIQALLIGVSLMIASVPFAGLLAVIVLVLG 262 Query: 253 MIPGGAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + A + V ++ G+ + + + D L+P ++G + P Sbjct: 263 VAQLPALLVTLPVIGWIWASGDYATVPAAAYSVLLVVGGMADNVLKPIMLGRGVDAPMPV 322 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ T G+LG+FIG +AL I+ + E + ++ Sbjct: 323 ILIGALGGMATSGILGMFIGATALALGYQIFMRWVDDNPERVRQQAA 369 >gi|170690238|ref|ZP_02881405.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144673|gb|EDT12834.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 381 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 142/346 (41%), Gaps = 6/346 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + F ++ LI+ T +P++ +A + + + Sbjct: 24 LITVLAVFCFRIVVPFLDLMVWGLILAITLYPLHIRLRRSLRNRDGLVATLIVLVAFGVI 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +VP L ++ +++ V + P ++ P G + W + + L Sbjct: 84 LVPSYLLGVAVADSIEHVMAVVKSGSFRIPPPAESVAGWPLVGQHVHDFWQQASTDLTGL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LK G + G L + +++I I + + R G +QQ+ S Sbjct: 144 AQRFAPQLKEAGRALLGTVTG-LGAGLLIFFIALIVAGILMAYGER-GHRSAQQIASRIS 201 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P +I+ + IR+ G+ IA + L++G + + G+P+ L + ++ + Sbjct: 202 --GPERGAQITDLCTATIRAVAQGVVGIAFIQMLLIGGGFVVMGIPAAGLLALGVLLIGI 259 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A + V ++++ + AT F + D L+P L+G + +P Sbjct: 260 MQLPATLITLPVIAFVMLTEGVSTATIAFSAYVFVAGLADNVLKPLLLGRGVAVPMPVVL 319 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G++GLFIGPV++A+ ++ + + E+I N Sbjct: 320 IGALGGMVTGGVIGLFIGPVMLAVGYELFWRWVKD-QPQAERIDEN 364 >gi|253700636|ref|YP_003021825.1| hypothetical protein GM21_2015 [Geobacter sp. M21] gi|251775486|gb|ACT18067.1| protein of unknown function UPF0118 [Geobacter sp. M21] Length = 354 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 7/345 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + I + F P+ ALIIG + P Y +++ + + + ++V Sbjct: 10 IAAFFTVAAIAAIVLFAAPILKPLAWALIIGIATMPHYQRILNRFPDRPGRASGLMLLAV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSH 129 ++P +L + E ++ Q LS IP L + Sbjct: 70 AVCLVLPASWLVITAAVNAPEWYRQLEQMIQEVTRTSSGALSQIPYYDRIMSLVERFGID 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + ++G I A+ D+ +++ + LFF YRDG Sbjct: 130 LGNIGGK----IASSGSTVILNAATNMVRNLFDFIFTLLVALFLLFFIYRDGERAVALCI 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 P + + + + + +G + +G++ G YW+AGVP+ V +TA Sbjct: 186 GKLAP-NPRKAQHYATQIRSITTAVAVGTILTCCTQGVIAGLGYWVAGVPAPVFFAALTA 244 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A+IP G I + + + G+ A L LW + D +RP +G + Sbjct: 245 IAALIPVVGTAIIWVPIVALTAVTGSYLTALLLALWCVFFVGFSDNAIRPLAIGAASDIS 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G + GV MGLLGL IGPV+ A++ +W +++ A + + Sbjct: 305 VLAVVTGALCGVVMMGLLGLIIGPVIFAVLFSMWDDAVSAAGDTE 349 >gi|226946440|ref|YP_002801513.1| hypothetical protein Avin_44170 [Azotobacter vinelandii DJ] gi|226721367|gb|ACO80538.1| Conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 368 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 138/334 (41%), Gaps = 7/334 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ + + + F +L ++I+ +P+ ++ A + V + + Sbjct: 24 LVAVLTIYCYLVFRPFLELMLWSMILAVMLYPLQRRLAARLGHHEGRTASLIVVVGLLIL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 +VP+ L + ++++ V + H P +++ P G + W + S Sbjct: 84 MVPIYLLGTSLVDSAQQVMETVRSGSLHIPPPSESVANWPVIGQPVHDFWQQAASDLSGS 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L+ + + + A G FL + ++I I + F G + + Sbjct: 144 IEKYRPQLRELLLGLLGKIAG-IGTGFLLFIAALIIAGIIMAF----GELGHRSAHRIAV 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P + + + IR+ G+ IA + L++G + L GVP L + ++ Sbjct: 199 RIVGPERGELLVELCTATIRTVAQGVLGIAFIQMLLVGVGFVLMGVPGAGLLALAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +I A + V +Y+ T +F +I +VD L+P L+G + +P Sbjct: 259 IIQVPATLITVPVIVYVFSSEGASLTTIVFAVYSILAGLVDNVLKPLLLGRGVDVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G +GG+ G+LGLFIGP+++A+ ++ + + Sbjct: 319 LIGALGGMVASGILGLFIGPIVLAVGYRLFWQWV 352 >gi|119477618|ref|ZP_01617768.1| hypothetical protein GP2143_09155 [marine gamma proteobacterium HTCC2143] gi|119449121|gb|EAW30361.1| hypothetical protein GP2143_09155 [marine gamma proteobacterium HTCC2143] Length = 364 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 8/347 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L I ++ II++ + FF ++ ALI+ +P+ S K +S A Sbjct: 16 VLTDVMIRFGVVTIIIVLCIQVFAPFFGIMMWALILAVALYPLNLSLAKKFNGNSGRAAA 75 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELW 123 + + + L P + L + +L ++ H P ++++P G + +W Sbjct: 76 LIVIIGLLLIGGPAVALGKSFTSHLLDLYTEFNSGKLHIQPPNSSVAELPLIGETLNRVW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T + E LK + AS G + S++ I + + G S Sbjct: 136 TNAADDLEQTLKNVEPQLKELSKKALVIAASTTGE-VFSFFASMVIAGIMMAY----GRS 190 Query: 184 ISQQLDSLGEHL-FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SQ + + + + K+ + IRS G+ +A + L+LG+ + AG+P Sbjct: 191 GSQAMLEILQRVSSEEKGGKLQALCVGTIRSVATGVIGVAFIQALLLGAGFIFAGIPGAG 250 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLV 301 LGVI ++ ++ A + YL G+ A+ F + D L+P L+ Sbjct: 251 ILGVIVLVVGILQIPAALVTLPAIAYLWFGGDASTASNIAFTVYLFVAGLADNVLKPMLL 310 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G + P G +GG+ G++GLF+G VL+ + I+ E + Sbjct: 311 GRGVDAPMPVVLLGALGGMVVAGIMGLFVGSVLLTVGYKIFMEWVKE 357 >gi|149189962|ref|ZP_01868241.1| hypothetical protein VSAK1_01632 [Vibrio shilonii AK1] gi|148836277|gb|EDL53235.1| hypothetical protein VSAK1_01632 [Vibrio shilonii AK1] Length = 378 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 148/348 (42%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++ I+L Y +K F PVL II P+ S A + + Sbjct: 19 ESAIRIGLLVILLTFTYDIIKPFIIPVLWGSIIAVALLPLTKKLESSLGGKRGLAATLVS 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPG-GMWASELWTK 125 + + L ++P + + + E ++V+ + + IP P ++DIP G +W Sbjct: 79 LIGISLLVIPFVMVSGS-IYEGVAHTTEVIQSGEIKIPGPTSKVADIPVIGDKLYSIWNL 137 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + +K F+ AS G + I + F IS Sbjct: 138 FATNMEKAIQQFLPEIK----GFLGTVASILGGALTS-LIMFIISLAIAGGFMAHAEKIS 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L+++ ++ + ++ IRS LG+ +A + ++G+A ++ VP+ L Sbjct: 193 GALETVAVRAVGKKAEQWANLMAATIRSVLLGVVGVAFIQAAIIGAAMFVFKVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T I+ + A + V Y+ G+ + T +W A+ + D L+P L+G + Sbjct: 253 LATLILCIAQLPALLIVAPVIFYVYSTGDGTSTTLFTIW-ALAGGLSDNILKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +P G +GG+ G++GLF+G +++A+ ++ I ++ + Sbjct: 312 DVPMPIILIGAIGGMLFAGIIGLFLGAIILAIWYELFLFWINYEEQTE 359 >gi|317406579|gb|EFV86769.1| hypothetical protein HMPREF0005_05760 [Achromobacter xylosoxidans C54] Length = 368 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 75/364 (20%), Positives = 148/364 (40%), Gaps = 12/364 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILV-----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK 55 M P + R +++ +IL SLY LK F ++ A I +WP+ + + Sbjct: 1 MNPNPRPPADLARNLLVVVILSALMIGSLYVLKPFLFGLIWATTIVVATWPVMLAVQRRC 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIP 114 V + ++ + ++PL L +++ + L + + P W+ IP Sbjct: 61 GGRRWLATVAMLIVLLVVIVLPLYQAISTLALHGGAIMTAIKGLPDYALMAPPGWVRGIP 120 Query: 115 -GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 GG + W + T ++ A+ G+ + ++I+ I Sbjct: 121 LGGERIAHEWQALADAGAGGLLARLEPYITMAAKWLLSNAAIVGVFVMHMLITIVIAGI- 179 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 Y G + + L R+ IR+ LG+ + A+ + + G Sbjct: 180 ---LYSQGDVAANFMQRFANRLAGHRGVAAIRLAGLSIRAVALGIVVTAVVQSALGGLGL 236 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 W+AGVP+ + + ++ + G + I+L + ++ A L L A+ + ++D Sbjct: 237 WIAGVPAAGIITALMLMLCLAQLGPFLPLLGGVIWLF-QNDMKVAAVLLLVWAVLVTMLD 295 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LRP L+ + L L G++GG+ G++GLFIGPV++A+ + + K + + Sbjct: 296 NLLRPLLIKRGVNLSMLLILAGVLGGMFAFGIVGLFIGPVILAVTSTLLKAWVDEVPPPA 355 Query: 354 EKIS 357 S Sbjct: 356 ADAS 359 >gi|261251647|ref|ZP_05944221.1| putative membrane protein [Vibrio orientalis CIP 102891] gi|260938520|gb|EEX94508.1| putative membrane protein [Vibrio orientalis CIP 102891] Length = 374 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 139/346 (40%), Gaps = 7/346 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ +++ + +K F PV+ II P+ S A ++ + L Sbjct: 26 LIVILLMFTYDIIKPFILPVIWGAIIAVALMPVCQKLESLYGGKRGLAATTIALAGIALL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL+ + + + + N +++ P G E+W+ ++ + Sbjct: 86 VTPLVMVSGSIVDGSTHALHVLQEGNIKIPGPQPSVAEWPLVGEKLHEVWSLFANNLEKA 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K+ + + G + L I + S+S L ++ Sbjct: 146 IQTFMPQIKSALTYLLGMVGNVLGSLLLSILSLAIAAGFMTY-----SKSLSAGLTTIAV 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + ++ I+S LG+ +A + L++G+ +++ G+P L +I I+ + Sbjct: 201 RVAGDNAQSWASMIAATIKSVLLGVIGVAAIQSLLIGAGFFVFGIPGAGILTLILMILCI 260 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 A + + Y+ + + AT +W + + + +P L+G + +P Sbjct: 261 AQLPALLVVLPIVGYMYMTQDTTTATLFTVW-VVVAALSENIFKPMLMGRGVDIPMPVIL 319 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ G++GLF+G V++A+ ++ + K +EK + Sbjct: 320 LGAIGGMLIYGIVGLFLGAVILAIWYELFVWWLNIEKAQQEKAAKK 365 >gi|253997450|ref|YP_003049514.1| hypothetical protein Mmol_2085 [Methylotenera mobilis JLW8] gi|253984129|gb|ACT48987.1| protein of unknown function UPF0118 [Methylotenera mobilis JLW8] Length = 351 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 82/355 (23%), Positives = 164/355 (46%), Gaps = 8/355 (2%) Query: 5 MLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+N I R I +I+ ++ L F A +L A II +WP+Y + A Sbjct: 1 MINTNQIARIASISLLIVGCVFVLYPFMAAMLFAAIICVFTWPLYQRVWLLFGKRDMLAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPG-GMWASE 121 + T+ ++ I+P+ +L ++ + Q PV P WL ++P G +E Sbjct: 61 AMMTLLLLFAMIMPMAYLAANLADSATLMLDEAQAVLQSMQPVAPTWLKNLPIIGESLAE 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + ++ + L L + + I F + + + + ++ ++ FFFYRDG Sbjct: 121 SWQRVMASHEELMHLLNQYAEP-----IRVFLLKVVQMVMGGFVQLVLVVFVAFFFYRDG 175 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + S+ L +++ + ++ LG+ A+ + V +WLAG P+ Sbjct: 176 TKLVAAVTSMVRRLGGELGQEMLVLSCNTVKGVMLGVFGTALAQASVGLFGFWLAGAPAP 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L + T +++IP G P+ + S++L G+ A L ++G + + +VD ++P L+ Sbjct: 236 LLLALATFFLSVIPVGPPLVWGGASLWLFNHGDQGWAIFLLVYGLLVISMVDNIVKPILI 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP L G++GG+ G +G+F+GP L+A+ + + + +++ Sbjct: 296 SHSSHLPLLLVVLGVLGGILAFGFIGIFLGPTLLAVGLTLVSHWVTLQNKRADEV 350 >gi|296447817|ref|ZP_06889730.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296254676|gb|EFH01790.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 396 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 139/351 (39%), Gaps = 7/351 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +ML + + + S ++ F A V + I+ +P++ + A Sbjct: 16 SMLIELIVRLGALAALAYWSFQLVQPFLAIVTWSAILTVALYPVFEWLATALGGRRKLAA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASEL 122 + T+ + + I P +L + ++ L +++ P P L +P G A + Sbjct: 76 TLITLVGLLVVIGPATWLGLGVVDGLRSLAARIDNGGLWVPPPPESLRSLPFVGQSAFDF 135 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W ++ +S LK G +F G + LS+I F + G Sbjct: 136 WELASTNLRSAVAQIAPSLKPLG-EFALDATKNAGTGAFKFLLSVIIAG----FMFAPGP 190 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + + + + + IR+ G+ +++ + V G LAG P Sbjct: 191 ALVRAIKTAAIRIDSKRAEHFVGLAGSTIRTVSRGVIGVSLLQAAVAGLGLQLAGAPGAS 250 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + ++A+I G + I+ LF + + +VD L+P ++ Sbjct: 251 LLTLCILVLAIIQIGPMLIVVPSIIWSW-TELPGIPAFLFTACMLTVTLVDNVLKPLVIA 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P L G++GGV G++GLF+GPV++A+ + + + + ++ Sbjct: 310 RGLTTPLLVIVVGVIGGVLAHGIIGLFVGPVVLAVAWELLGAWLGSAEPSE 360 >gi|289548782|ref|YP_003473770.1| hypothetical protein Thal_1011 [Thermocrinis albus DSM 14484] gi|289182399|gb|ADC89643.1| protein of unknown function UPF0118 [Thermocrinis albus DSM 14484] Length = 353 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 146/346 (42%), Gaps = 6/346 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++ LY ++ F PVL A++ P+ + + + +S A + V + Sbjct: 11 ILVLTFLFLMLVLYIIRPFIVPVLWAVVFTLALHPL-NHLLRRYVKSRFLSAFLLVVLTL 69 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++P+ FL + + + +V+ +V Q+ L + G + L + Sbjct: 70 LLIVIPVSFLGFMLVEQTLHMVNYLVSFAQNHTY--EELISLLKGHPLFSTVQQWLDYLG 127 Query: 132 SLKILSETFLKTN-GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++ ++ ++ S +I LFF RDG Sbjct: 128 TQQVRDVFISGVQRVSQWLLQWISSLIGTSGVILFKSFVFLITLFFLLRDGDRFLDFAKR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P I V + I +T G +A+ +G++ Y++AG V LGV T Sbjct: 188 FLP-IDPHDTDMILYTVYRTILATVYGTVGVAVLQGILSFVGYYVAGFDYAVLLGVATFF 246 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G + S+YLL++G + L ++ + + +D LRPF++ + LP+ Sbjct: 247 ASFVPPFGTASVWFPSSVYLLLQGKMTEGISLLIYSFLVISSLDNFLRPFIMKFGVPLPY 306 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF +GG+ G +GLFIGP++ + + + + +K Sbjct: 307 VVLFFSTLGGLAAFGFVGLFIGPMIFSTMFSLLIIYERRFLKASDK 352 >gi|94969196|ref|YP_591244.1| hypothetical protein Acid345_2169 [Candidatus Koribacter versatilis Ellin345] gi|94551246|gb|ABF41170.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 354 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 125/336 (37%), Gaps = 8/336 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + L LK F + +II +P Y + AV+ T+ ++ L Sbjct: 26 LIALLALTCFVILKAFIPLLAWGVIIATAGYPGYRKLAAALGGREKLAAVLCTLILLSLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P + L + + S+V N P P + P G +++WT + Sbjct: 86 VIPAVLLAGTLTDGARSIASQVQSGNFRIPPPPAKVQGWPLIGKPLNKVWTTASTDATQA 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ + G L I I+ F ++ + Sbjct: 146 LNKVSPVIQKYAPTLL-----SAGAKLGGTLLQFILSIVLAGFLLASSRGNAEFSQKIFR 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +F + + +RS G+ +A+ + ++ + + G+P ++ +A Sbjct: 201 RIFREKGDEFETLTANTVRSVTNGIVGVALIQTILASLGFLVVGLPGAGMWSLL-FFVAA 259 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + + + + A +W + ++D L+P L+G ++P L F Sbjct: 260 VLQVGVVVLLPAVAFAFTITSTTPAVIFLVWCMF-VGVIDNVLKPMLLGRGNQVPTLVVF 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G++GG MG +GLFIG +++++ ++ + + Sbjct: 319 LGVIGGFIAMGTIGLFIGAIILSVGYKLFLIWLEDV 354 >gi|113971076|ref|YP_734869.1| hypothetical protein Shewmr4_2741 [Shewanella sp. MR-4] gi|113885760|gb|ABI39812.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 369 Score = 166 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 8/348 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 M++ + F +L A+I+ +P + + + A + V + + Sbjct: 26 MLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLNDKQGRAATLLIVVGLMVL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P + + M LV +V +++IP G ++W K + SL Sbjct: 86 VLPTITMVSSMTDNMGSLVERVNQNTLEVPAPKESIANIPFVGAKIYDVWQKASTDLPSL 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L I AS G + + S I I + + G + +Q + Sbjct: 146 VKSLQPHLGEVTKQVIHALASISGSLLMSMF-SFIIAGIMMAY----GRAGAQSSARIAT 200 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P K+ I IR+ LG+ +A + L++G LAG+P ++ ++ Sbjct: 201 RIAGPERGAKLINICSTTIRAVALGVIGVAFIQALLVGIVMTLAGIPLVGIFFILVLVLG 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + A + Y+ + G+ + ++ I VD L+P L+G + P Sbjct: 261 IAQVPALLVTLPAIAYIWMTGDNGTVGSIIYTVLLILAGAVDNVLKPILLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G+LG+FIG L+++ I+ + E + + Sbjct: 321 VLIGALGGMATSGILGMFIGATLLSIGYRIFMAWVDEGLEEPLREQDD 368 >gi|163782562|ref|ZP_02177559.1| hypothetical protein HG1285_16800 [Hydrogenivirga sp. 128-5-R1-1] gi|159882135|gb|EDP75642.1| hypothetical protein HG1285_16800 [Hydrogenivirga sp. 128-5-R1-1] Length = 355 Score = 166 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 145/337 (43%), Gaps = 8/337 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++F I ++ L F P+L A++IG +P++ T A++ ++ V Sbjct: 13 LLVLFFIFAAVLMLLPFAVPILWAVVIGIVLYPLHRYIEKVVRNR-TLSALLMSLIVFLF 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 IVPL + + ++ + +V++ Q L + + + + + + Sbjct: 72 IIVPLSVVSVLVLQQLVDATQRVMMYLQSHSYQ-ELLETLGKSPVVKDYFERFSPVMEFV 130 Query: 134 KILSETFLKTNGID----FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + ++ F+ + I I ++ FF RDG I ++++ Sbjct: 131 QKEEFRQLIADSLNRVLKFLGDKLGQLAFIAGRNLFYIFVFLLTFFFILRDGPGILRRVE 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + + + I + G A+ + + AY + G+ + V+T Sbjct: 191 RLIP-MNDEDLESVMATMYRTILAVVYGSVGTALLQSIFAFFAYSVVGIRFALLWSVLTF 249 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A IP GA + +++Y I+ + A L WG + + +D +RP ++ +++P Sbjct: 250 FAAFIPPFGASAVWFPLAVYSFIEFGTWQAAFLGAWGVLVISSMDNFVRPLIIKQGVQIP 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ FF +GG+ G +GLF+GP++ + ++K Sbjct: 310 YVVLFFATIGGLLKFGFIGLFLGPIIFTTLFALFKIY 346 >gi|113868389|ref|YP_726878.1| permease [Ralstonia eutropha H16] gi|113527165|emb|CAJ93510.1| predicted permease [Ralstonia eutropha H16] Length = 367 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 142/347 (40%), Gaps = 7/347 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + F ++ ++I+ T +P+ + A + ++ + + Sbjct: 24 LIAVLAIFCFRIFRPFLDLIVWSVILAVTIYPLQVRLRRRLGNKDGRAATLIVLAAIAII 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +P L + M+ ++ V H P ++ P G +LW + S S+ Sbjct: 84 ALPAYLLGAAMIDSMENAIAIVKSEGIHIPPPHESVASWPLVGQRLYDLWLQAASDLASV 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K + + A+ G L + ++I I + + G + ++ + Sbjct: 144 VQTLAPQIKEISLAVLAA-AAGIGKGLLIFVFALIIGGIFMAY----GEAGNRSTVQIAS 198 Query: 194 HLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +F ++I+ + IR+ G+ IA + L++G + + GVP+ L + ++ Sbjct: 199 RIFGLERGQRIATLCTATIRAVAQGVVGIAFIQMLLIGIGFVIKGVPAAGVLAMAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A + V IY+ AT +F + D L+P L+G + +P Sbjct: 259 IAQLPATLITVPVIIYVFATEGASVATIVFAIYVFVAGLADNVLKPLLLGRGVDVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G++GLFIGPV++A+ ++ + + + + Sbjct: 319 LIGALGGMVTGGVIGLFIGPVVLAVGYQLFWQWVEDPPPQADPGNQQ 365 >gi|172038736|ref|YP_001805237.1| hypothetical protein cce_3823 [Cyanothece sp. ATCC 51142] gi|171700190|gb|ACB53171.1| hypothetical protein cce_3823 [Cyanothece sp. ATCC 51142] Length = 374 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 145/342 (42%), Gaps = 7/342 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++I ++ ++ F +L +I+ +P++ ++ V+ Sbjct: 20 IVDLLIRLFLIGLLLAWCFLLIRPFLGILLWGIILAIAVFPVFLWLKNRLGGRRKLAGVL 79 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 + + + I P+ F+ + + + + P P + + P G + +WT Sbjct: 80 LILFGIAVIIGPVSFVATIFVGNAQTFADNLTSGSLKVPPPPEGVENWPIIGNYVDRMWT 139 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ S+ + L+T + + FA G++ L + LSII I + + Sbjct: 140 SASNNLISVLSKFQPQLETIAKNLLF-FAGNMGLVLLKFILSIIVAGILT----INSKQL 194 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++++ + + P ++ ++ IR G+ +++ + L++G + +AG+P L Sbjct: 195 NRRIKRIFIRVTPQQGEEFLQLATATIRGVTRGIIGVSLIQSLLVGIGFTVAGIPLSGLL 254 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ ++ ++ G I+ A L +W I ++D LRP + Sbjct: 255 TVLCLVLCILQIGLGPVVFPSIIFAWYTMGTLKALLLSIW-LIFCTLIDNILRPIFMSQG 313 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + +P L F G+ GG G+LGLFIGPV+++L + + Sbjct: 314 VSVPILVIFIGVFGGSLLHGILGLFIGPVVLSLGYELALAWV 355 >gi|110598136|ref|ZP_01386414.1| Protein of unknown function UPF0118 [Chlorobium ferrooxidans DSM 13031] gi|110340268|gb|EAT58765.1| Protein of unknown function UPF0118 [Chlorobium ferrooxidans DSM 13031] Length = 359 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 140/340 (41%), Gaps = 6/340 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++ FF + A I + P+++ F S + A + V+++ + +PL Sbjct: 20 ALFFAMIRYFFMAIFLAAIFSALAMPLFNRFNRWFRGSQSLSAAMTIVTLLLVVFLPLAA 79 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + L S + Q I P + + L+ + + Sbjct: 80 LLGVVASQAVRLSSIALPLIQQQIKEPAVFDQ----QLRTLPFYDELALYREEILKKAGE 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L + + S F + ++ + + +FFF +DG ++ + L + Sbjct: 136 LASQAGSLLFSSISSFTVSAVNDLFLLFIFLYTMFFFLKDGQLFLDRILACLP-LTKSDE 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 ++ V R+T G ++ + +G + G A AG+ S + G + ++++++P G P Sbjct: 195 YRLLDRFLSVTRATLKGTLVVGVVQGSLAGLALHFAGIESAIFWGTVMSVISVVPVLGPP 254 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + IYL G A + L+ +I + +D +RP L+G ++ L FF +GG Sbjct: 255 IVWVPAVIYLAATGQYPQAIGVALFCSIVVGQIDNIIRPILIGRDTRMHELLIFFSTLGG 314 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + GL G +GP++ AL +W+ + E +I Sbjct: 315 IGFFGLFGFILGPIIAALFVTLWEMYAESFSEFLAEIKGE 354 >gi|116748040|ref|YP_844727.1| hypothetical protein Sfum_0593 [Syntrophobacter fumaroxidans MPOB] gi|116697104|gb|ABK16292.1| protein of unknown function UPF0118 [Syntrophobacter fumaroxidans MPOB] Length = 376 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 139/354 (39%), Gaps = 6/354 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I+ + ++ L F ++ ALI+ T +P++ + A + Sbjct: 21 DILIRAGLILVLAMLCYQVLSPFLTLMVWALILAVTIFPLHQFLAGRIGGRQGLAAALLV 80 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L +VP L + +LV+ V + + P G ++W++ Sbjct: 81 IVGLMLIVVPTAMLMSSLGDSVHQLVNDVQNNSLKIPAPRPGVEGWPVVGKKVHDIWSRA 140 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L + + + A G L + S I I + F G Sbjct: 141 YADLPALVQSMQPKIGELAKTALGFVAGIAG-GLLQFIASFIVAGIIMAFGQSGGRGSLA 199 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + +R+ IR+ G+ +A + +++G A ++GVP AL + Sbjct: 200 IFERIVGR---ERGGEFARLSTSTIRAVSQGVIGVAFIQAIIVGLALLVSGVPWAGALAL 256 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLVGGPI 305 I ++ + A I +Y+ + G+ NA + I + D L+P ++G + Sbjct: 257 IVLVLGIAQIPALIVTLPAIVYIWMSGHYGNAAAVAYTVVLILSGMTDNVLKPLMLGRGV 316 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P G +GG+ T G+LG+F+G L+ L ++ + A + + + + Sbjct: 317 DAPMPVILLGALGGMGTAGILGMFVGATLLTLGYQVFMGWVAANPDAGQAQAES 370 >gi|150376865|ref|YP_001313461.1| hypothetical protein Smed_4731 [Sinorhizobium medicae WSM419] gi|150031412|gb|ABR63528.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 359 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 13/332 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F + AL++ P++ S+ A + + VPL F+ Sbjct: 39 CTFLTVPFLPALTWALVLAVMFQPLHRRVKSRFR-YPDAAAAATVAIAVFVVAVPLTFMA 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + + A + G L++ P A L + Sbjct: 98 ERLVNEAAKGAKIIEEALRSGTWR-DALANYPRLAPAVVWIETQLDLAG---------IA 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ++ F++ F + + + LF+F RDG + L L + Sbjct: 148 GSATSWLTNFSASFVRGSVAQIIDAVLTFYFLFYFMRDGRQVLAALKEHSP-LSEQDMNR 206 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + V + + + G +A +G + G +WL G+P+ V G+ ++A++P GA I Sbjct: 207 LFTRVHETVHAVVFGTVAVAAVQGAMGGLMFWLLGLPAPVVWGLAMGLLAVVPVLGAFIV 266 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++ L + G A L WGA + +D L P VG +KL L F ++GG+ Sbjct: 267 WLPAALSLALSGEWGKALILAGWGAGVVATIDNLLYPIFVGDRLKLHTLTAFMSMIGGII 326 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G GL IGPV + ++ E + Sbjct: 327 VFGSAGLVIGPVAFTVTLLLLDIWRQHNTEPR 358 >gi|28901438|ref|NP_801093.1| hypothetical protein VPA1583 [Vibrio parahaemolyticus RIMD 2210633] gi|153839443|ref|ZP_01992110.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|260362991|ref|ZP_05775860.1| hipothetical membrane protein [Vibrio parahaemolyticus K5030] gi|260880278|ref|ZP_05892633.1| hipothetical membrane protein [Vibrio parahaemolyticus AN-5034] gi|260896661|ref|ZP_05905157.1| hipothetical membrane protein [Vibrio parahaemolyticus Peru-466] gi|28809985|dbj|BAC62926.1| putative membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747032|gb|EDM58020.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|308085424|gb|EFO35119.1| hipothetical membrane protein [Vibrio parahaemolyticus Peru-466] gi|308091913|gb|EFO41608.1| hipothetical membrane protein [Vibrio parahaemolyticus AN-5034] gi|308112310|gb|EFO49850.1| hipothetical membrane protein [Vibrio parahaemolyticus K5030] Length = 381 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 139/348 (39%), Gaps = 8/348 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++L+ Y ++ F PV+ II P+ A Sbjct: 19 ESAIRIGLIFVLLMFTYDIIRPFILPVIWGAIIAVALLPLTKKLQRAYGGRRGLAATTIV 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L + PL+ + + + + ++D P G E+WT Sbjct: 79 LLGIALLVTPLVMVSGSIVDGATHALDVLQNGQVKIPGPKASVADWPLVGDKLYEVWTLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +K+ + G + L I + S++ Sbjct: 139 ATNLEQAIQTFMPQIKSALTSLLGMVGGVLGSLLLSILSLAIAAGFMTY-----SESLAS 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L + Sbjct: 194 GLQTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I+ + A ++ V Y+ + + AT +W A+ + + L+P +G + Sbjct: 254 ILMILCIAQLPALLAVLPVIGYMYMTQDSTTATMFTVW-AVVGALSENLLKPMFMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P G +GG+ G++GLF+G V++A+ ++ + K ++ Sbjct: 313 VPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWLSIEKAQQQ 360 >gi|21672406|ref|NP_660473.1| putative inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091630|sp|Q8KA12|Y115_BUCAP RecName: Full=UPF0118 membrane protein BUsg_115 gi|21623015|gb|AAM67684.1| hypothetical 39.8 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 364 Score = 165 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 76/345 (22%), Positives = 136/345 (39%), Gaps = 7/345 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ I S ++ F A +I +WP+ + Sbjct: 10 LSQFILSLIFIIAISATSFLIIQPFILGFSWASMIVIATWPLMLKMQKFLGGKRLVAVIG 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 + ++ LFI+P++FL + L+ +N P WL DIP G + Sbjct: 70 MIIILLLLFIIPIVFLVNSLIKTSIPLIHWF-SSNNLEFPELIWLQDIPIIGKKIFISYQ 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L I +F A G+ + L ++F ++ Y +G I Sbjct: 129 ELLDSDGGELIREIRPYMGRTTEFFIIQAKNCGLFIMHLTLMLLFSLLL----YWNGEKI 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + L + I + + +R+ LG+ + A+ + ++ G ++GVP L Sbjct: 185 SNSIRQFASRLSSRNGEAIVLLSVQAVRAVALGVVVTALIQAVLSGIGLLISGVPYWTLL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ +I G I+L N T L +W +FI+D LRPF + Sbjct: 245 MILIVFSCLIQLGPLPILIPSVIWLYWNSNTTWGTLLLIWSCF-VFILDNILRPFFIRIG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP G++GG+ G++GLFIGPV++ ++ + I I Sbjct: 304 SDLPTFLILLGVIGGLLAFGMIGLFIGPVVLVILYRLIVSWIYGI 348 >gi|158521116|ref|YP_001528986.1| hypothetical protein Dole_1102 [Desulfococcus oleovorans Hxd3] gi|158509942|gb|ABW66909.1| protein of unknown function UPF0118 [Desulfococcus oleovorans Hxd3] Length = 365 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 129/332 (38%), Gaps = 8/332 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + + P+L ALI + P+Y F+ K + A + + + + ++P + + Sbjct: 29 SYKMIAPYLDPILLALIFAAMANPVYQWFVKKTKGRENLSAGLVCLLLTLVIVIPCMIML 88 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL- 141 + + + V + G L D P A + ++L + + Sbjct: 89 TVIIAQGIDSVGAINRWVAAGN--LEKLKDAPLVRTAVDFMQRYLPSSVLAGVDLQALAI 146 Query: 142 --KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + MI FF +D + + L + + Sbjct: 147 KSSSAAGKLLVSQSGAILGNISMVVGKFFLMIFVFFFVLKDQQRLYDYILHLVP-MSAEH 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + + + V RS LG + A+ +G G A+ + G+P G + A ++IP G Sbjct: 206 ETVLIQKMKDVSRSAVLGSFLTALAQGAAGGLAFAICGMPG-FFWGAVMAFASLIPVVGT 264 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + YLLI G I L +W + + ++D LRP + G + + FF ++G Sbjct: 265 ALVWVPAAAYLLISGKIGLGVFLIIWCVVVVGMIDNLLRPLFMRGGAGMSTVVIFFAILG 324 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ GL+GL GP++ + V+ + Sbjct: 325 GIHLFGLIGLIYGPLIFGITMVMLYIYDLEFD 356 >gi|323139388|ref|ZP_08074439.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322395381|gb|EFX97931.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 368 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 144/349 (41%), Gaps = 7/349 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ I +I +I + + F + ++I+ +P+++ S+ Sbjct: 19 LRDHNAIELAIRLSLIAILIYWTAVIVFPFAPIIAWSVIMAVALYPVFAWLSSRLGGRPR 78 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 AV T + L + P+ +L + L+ V P + + P G Sbjct: 79 LAAVALTCMSLVLVVGPVTWLGLDLIEASTGLIDSVNAGKLAVPPPVASVKEWPLIGQQL 138 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W+ ++ +S LK G I S G+ L + LS++ M F + Sbjct: 139 YDFWSLASTNMRSALAPLLPQLKPLGEKLIEAV-SSAGVGTLKFLLSVVVMG----FLFL 193 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +++L + A + + IR+ G+ +++ + +V G+ LA VP Sbjct: 194 YAEPLVAVVENLASRIDGAQGARFVALAGDTIRAVSRGVIGVSLLQAVVAGAGMTLAAVP 253 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I+ ++ G + V+I+ + + A L + + + D ++PF Sbjct: 254 GASVLTLLVLILGIVQVGPGLVTVPVAIWAWLSLSPLPALGLTI-CLGAVSLSDALVKPF 312 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + P + TF G++GG+ G++GLF+GP+++A+ + + Sbjct: 313 FLSRGLTTPMIVTFVGVIGGILAHGIIGLFVGPIVVAVAWNLADAWLHD 361 >gi|269960287|ref|ZP_06174661.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834898|gb|EEZ88983.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 383 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 135/342 (39%), Gaps = 7/342 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ +++ + +K F PV+ II PI A + + L Sbjct: 26 LILVLLMFTYDIIKPFILPVIWGAIIAVALMPICKKLAKVYGGKRGLAATTIALLGIALL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL+ + + + + + +++ P G E+WT ++ + Sbjct: 86 VTPLVMVSGSIVDGATHALDVLQSGDIKIPGPKPSVAEWPLVGDKLYEVWTLFATNLEKA 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K + G + L I + S++ L ++ Sbjct: 146 IQTFMPQIKAGLTSLLGMVGGALGSLLLSIISLAIAAGFMTY-----SESLASGLKTIAV 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + ++ I+S LG+ +A + L++G+ +++ GVP+ L ++ I+ + Sbjct: 201 RTAGDNAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLTLVLMILCI 260 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 A ++ V Y+ + + AT +W + + + +P L+G + +P Sbjct: 261 AQLPALLAVLPVVGYMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVIL 319 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GG+ G++GLF+G V++A+ ++ + K +++ Sbjct: 320 LGAIGGMLFYGIVGLFLGAVILAIWYELFVWWLNIEKAQQQQ 361 >gi|194290057|ref|YP_002005964.1| hypothetical protein RALTA_A1960 [Cupriavidus taiwanensis LMG 19424] gi|193223892|emb|CAQ69901.1| conserved hypothetical protein, UPF0118; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 367 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 142/347 (40%), Gaps = 7/347 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + F ++ ++I+ T +P+ K A + ++ + + Sbjct: 24 LIAVLAIFCFQIFRPFLDLIVWSVILAVTIYPLQVRLRRKLGNKDGRAATLIVLAAIAII 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +P L + + ++ + H P ++ P G ++W + S + Sbjct: 84 ALPAYLLGAAMVDSVANAMAVIRKEGLHIPPPAESVASWPLVGQRLYDVWLQAASDLTGV 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ + + A+ G L + ++I I + + G + ++ + Sbjct: 144 IQAHAPQVREISLAVLGT-AAGIGKGLLIFVFALIIGGIFMAY----GEAGNRSAVQIAA 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +F P ++I+ + IR+ G+ IA + L++G A+ + GVP+ L + ++ Sbjct: 199 RVFGPERGQRIASLCTATIRAVAQGVVGIAFIQMLLIGVAFVIKGVPAAGVLAMAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A + V IY+ AT +F + D L+P L+G + +P Sbjct: 259 IAQLPATLITVPVIIYVFASEGASVATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G++GLFIGPV++A+ ++ + + E + Sbjct: 319 LIGALGGMVTGGVIGLFIGPVVLAVGYQLFWQWVEDPPSQTEPGNQQ 365 >gi|294139374|ref|YP_003555352.1| hypothetical protein SVI_0603 [Shewanella violacea DSS12] gi|293325843|dbj|BAJ00574.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 376 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 141/351 (40%), Gaps = 8/351 (2%) Query: 9 QGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F ++L + ++ F PVL II P+ + A Sbjct: 15 ESAIRIGLLFMLVLWTFDIIRPFVIPVLWGAIIAVALMPLTQKLEKAFKGRRGLAATAMA 74 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + + L ++P + + + + + + + ++DIP G E+W Sbjct: 75 IIGIALLVIPFVLVSGSIFDGVSHAIEVLQSGEVNIPGPTQKVADIPVIGDKLYEIWALF 134 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +KT + AS G + I + F + IS Sbjct: 135 STNLEKAVQHFLPEIKTA----VGTIASVIGSSLAT-LMMFIISLAIAAGFMSNAEKISG 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + ++ + + IRS LG+ +A + +++GSA ++ VP+ + + Sbjct: 190 AISTVAVRVVGKNGEQWTTLTAATIRSVLLGVVGVAFIQSMLIGSAMFVFNVPAAGLITL 249 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ + A I Y+ + +A +W + + D L+P L+G + Sbjct: 250 GVLILGIAQLPALIVVLPAIFYVFSTQDTTSAIIFTVW-VLLAGVSDSFLKPMLMGRGVD 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +P G +GG+ G++GLF+G V++A+ ++ + A K + + S Sbjct: 309 VPMPVILIGAIGGMLAAGIIGLFLGAVILAIWYELFMAWLKADKAPEAEQS 359 >gi|260899709|ref|ZP_05908104.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ4037] gi|308106878|gb|EFO44418.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ4037] gi|328469371|gb|EGF40317.1| hypothetical protein VP10329_10821 [Vibrio parahaemolyticus 10329] Length = 381 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 139/348 (39%), Gaps = 8/348 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++L+ Y ++ F PV+ II P+ A Sbjct: 19 ESAIRIGLIFVLLMFTYDIIRPFILPVIWGAIIAVALLPLTKKLQRAYGGRRGLAATTIA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L + PL+ + + + + ++D P G E+WT Sbjct: 79 LLGIALLVTPLVMVSGSIVDGATHALDVLQNGQVKIPGPKASVADWPLVGDKLYEVWTLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +K+ + G + L I + S++ Sbjct: 139 ATNLEQAIQTFMPQIKSALTSLLGMVGGVLGSLLLSILSLAIAAGFMTY-----SESLAS 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L + Sbjct: 194 GLQTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I+ + A ++ V Y+ + + AT +W A+ + + L+P +G + Sbjct: 254 ILMILCIAQLPALLAVLPVIGYMYMTQDSTTATMFTVW-AVVGALSENLLKPMFMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P G +GG+ G++GLF+G V++A+ ++ + K ++ Sbjct: 313 VPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWLSIEKAQQQ 360 >gi|311106377|ref|YP_003979230.1| hypothetical protein AXYL_03195 [Achromobacter xylosoxidans A8] gi|310761066|gb|ADP16515.1| hypothetical protein AXYL_03195 [Achromobacter xylosoxidans A8] Length = 376 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 137/341 (40%), Gaps = 7/341 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++ SLY L+ F ++ A I +WP+ + + V ++ + Sbjct: 19 VILAGLMAGSLYILRPFLPGLVWATTIVVATWPVMLAIQRYCGGRRWIGTLTMLVILLFV 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ 131 ++PL + L +++ V + + P W+ IP G + W Sbjct: 79 IVLPLYEVISTLALHSGTIMAAVKSLPDYALLAPPAWVQGIPLVGPKIAHEWQTLSDAGA 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T+ + ++ A+ G + ++++ I Y G + Sbjct: 139 GGLLAKLEPYLTSAVTWLLGHAAIVGAFMMHMLITVVVAGI----LYTKGEVAVDFVRRF 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L ++ + IR+ LG+ + A+ + + G W+AGVP+ L + ++ Sbjct: 195 FNRLAGQRGLAAVKLAGQAIRAVALGIVVTAVVQSGLGGIGLWIAGVPAAGILTALMVML 254 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + ++L A L +W A+ + ++D LRP L+ + L L Sbjct: 255 CLAQLGPFLPMLGGVVWLFQNDMKLAAAVLLVW-AVLVAMLDNLLRPLLIKRGVNLSLLL 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++GG+ G++GLFIGPV++A+ + K I + Sbjct: 314 ILVGVLGGLFAFGIVGLFIGPVILAVTHTLLKAWIDEVPPP 354 >gi|284163852|ref|YP_003402131.1| hypothetical protein Htur_0560 [Haloterrigena turkmenica DSM 5511] gi|284013507|gb|ADB59458.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 132/337 (39%), Gaps = 18/337 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + ++ + +S + F L A+++ + P+ + SS A+ Sbjct: 1 MNISKGFLLALVAVLAFLSWLLIAPFLQYALIAVLLAYVLRPVQRRLERRT--SSMIAAM 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + F++PL + + + +V + + V + + Sbjct: 59 ALVLLTITGFVIPLAIILTVVIQDATRIVENLDADSVSVTEVESLIQE------------ 106 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + S T G + ++ + F + + L++ +DG + Sbjct: 107 --QTGMSVDLMSSLTDAARQGGQLVLEQSTAWLSAFTHALIGFGLALFMLYYLLKDGDKL 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + +V+ + +G +IA+ +GL+ G + G+P+ Sbjct: 165 IGWIRKRTP-LPDDVQDDLYTELDEVMHAVLIGHVLIALVQGLLAGIGLIVTGIPNAAFW 223 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI ++A+IP G + + ++LL G A LF++ + + + D LRP +V Sbjct: 224 TVIMVVLALIPIIGTFLVWGPAVVFLLATGEPLFAVGLFVYSTVIVGLSDDYLRPLVVDR 283 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +L G++GG G +GLF GPV++ + Sbjct: 284 YAELNPAVIIVGVLGGAYAFGFMGLFFGPVILGALRA 320 >gi|313887473|ref|ZP_07821162.1| putative membrane protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923115|gb|EFR33935.1| putative membrane protein [Porphyromonas asaccharolytica PR426713P-I] Length = 401 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 115/323 (35%), Gaps = 19/323 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + + VL AL I + +K + A + TV + F++PLL + + Sbjct: 40 LPYMSGVLGALTIYVLLRGQMKWLVERKRWGRNWAASLLTVEAIFFFLIPLLGIVLMLID 99 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + N + + +++ Sbjct: 100 LFSAFDPE--SLNVLTTQAQDVVKQVEERFGIEIWSNENIQ---------------KLTS 142 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + L+ ++ L+F R ++ L K +S Sbjct: 143 FSTSLVKGLLQGMSSFFLNAFIILFLLYFMLRGYDQFEAAVEELLP-FTECNKKTVSNET 201 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 +++S +G+ ++AI +G+ Y + GV + + V+T +IP G + + ++ Sbjct: 202 ISIVKSNAIGIPLLAIVQGVFAYIGYLIFGVDNALLFAVLTTFTTIIPVLGTMLVWIPIA 261 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + I G+ NA L L+G I + VD R L + L T FG+ G+ G Sbjct: 262 VVMGINGDWLNAILLALYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFW 321 Query: 327 GLFIGPVLMALIAVIWKESIMAI 349 G+ GP++++LI + Sbjct: 322 GVIFGPLILSLIVLFINLYRHDF 344 >gi|85717448|ref|ZP_01048397.1| hypothetical protein NB311A_10710 [Nitrobacter sp. Nb-311A] gi|85695750|gb|EAQ33659.1| hypothetical protein NB311A_10710 [Nitrobacter sp. Nb-311A] Length = 360 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 143/337 (42%), Gaps = 7/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +I + ++ F + + ++++ +P++ A I T + + Sbjct: 22 LLALLIYWTFVLIRPFVSILAWSIVLTVALYPVFDLLSRLLGGRQRLAAAILTFINLGIV 81 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I P ++L + +KE + N P ++ P G E W + + ++ Sbjct: 82 IGPAMWLGLNALEGVKEFAVNLGAGNLVIPSPPESINTWPLIGPNVYEFWDQASINIRAA 141 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +LK + FA G+ L + LS+ F + G + + S Sbjct: 142 LREVAPYLKPLAGGLLA-FAGNAGVGTLKFLLSVALSG----FLFPHGSQLMEAGGSFLY 196 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + P + + IR+ G+ IAI + L+ G + LAG+ S L + I+++ Sbjct: 197 RIVPEQSEHFLALAGATIRAVSQGVIGIAIIQSLLAGIGFELAGLSSAGVLALAVMILSI 256 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + GA I V I++ + AT L ++ + + I+D L+P ++ + P L F Sbjct: 257 VQIGAAIVLVPVIIWIWTDKDFTTATLLTVFLGL-VGILDNVLKPLVMKRGLTTPTLVIF 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG G++GLF+GP++++L + + + + Sbjct: 316 VGVIGGTLAHGIVGLFVGPIILSLAWELTVAWLRSGR 352 >gi|197118593|ref|YP_002139020.1| membrane protein [Geobacter bemidjiensis Bem] gi|197087953|gb|ACH39224.1| membrane protein UPF0118 [Geobacter bemidjiensis Bem] Length = 355 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 145/349 (41%), Gaps = 11/349 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ + + F+ + ++ + P+ ALIIG + P Y+ + + E + Sbjct: 1 MDKKTYFSILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGR 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWAS 120 + + ++V ++P +L + + +V Q LS +P Sbjct: 61 ASGLMVLAVSLCLVLPATWLVVTAAVSAPDWYRQVEQLVQDFSKTGSGALSQLPFYDRIM 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L K + + ++ + A+ D +++ + LFF YRD Sbjct: 121 GLVQKFGIDLAGIGQKAA----SSASTIVLNTATDMVRNLFDLIFTLLVALFLLFFVYRD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + ++ + + + +G + +G++ G YW+AGVP+ Sbjct: 177 GERAVSVCIAKLAP-DQRRAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPA 235 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G +TAI A++P G + + + + ++G+ NA L LW + + + D +RP Sbjct: 236 PIFCGALTAIAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPL 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 VG + L G + GV MG+LGL +GP++ A++ IW + + Sbjct: 296 AVGASSDVSVLAVVAGAICGVVIMGVLGLIVGPLIFAVLFSIWDDVVAE 344 >gi|114048310|ref|YP_738860.1| hypothetical protein Shewmr7_2819 [Shewanella sp. MR-7] gi|113889752|gb|ABI43803.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 369 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 135/348 (38%), Gaps = 8/348 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 M++ + F +L A+I+ +P + S + + A + + + + Sbjct: 26 MLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQSIAKRLNDKQGRAATLLIIIGLMVL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P + + M LV V +++IP G ++W K + SL Sbjct: 86 VLPTITMVSSMTDNMGSLVESVNQNTLEVPAPKESIANIPFVGAKIYDVWQKASTDLPSL 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L I AS G + + S I I + + G + +Q + Sbjct: 146 VKSLQPHLGEVTKQVIHALASISGSLLMSMF-SFIIAGIMMAY----GRAGAQSSARIAT 200 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P K+ I IR+ LG+ +A + L++G LAG+P ++ ++ Sbjct: 201 RIAGPERGAKLINICSTTIRAVALGVIGVAFIQALLVGIVMTLAGIPLVGIFFILVLVLG 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + A + Y+ + G+ + ++ I VD L+P L+G + P Sbjct: 261 IAQVPALLVTLPAIAYIWMTGDNGTVGSIIYTVLLILAGAVDNVLKPILLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G+LG+FIG L+++ I+ + E + + Sbjct: 321 VLIGALGGMATSGILGMFIGATLLSIGYRIFMAWVDEGLEEPLREQDD 368 >gi|251771895|gb|EES52469.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum] Length = 369 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 144/322 (44%), Gaps = 3/322 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + P+L A I+ F ++P+ + F+ + A++ TV + L I PLL Sbjct: 33 VLAPYVVPLLWAAILAFATYPLLA-FLRRFVTRPLLSALLMTVLFLGLVIAPLLSFALPL 91 Query: 86 MLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E+ V+K+ ++ +P W+ +P +E W ++ + L+++ Sbjct: 92 TQEILTEVAKIRGFLENPQATLPPWVDHLPVIGPRAEGWYQNFRSHTPSLSIFLDKLQSH 151 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + + +++ LF FY G ++ + +L ++ Sbjct: 152 LLTW-GDRLFSIMTDAGKIAVKTLILLLGLFAFYLRGPALWAGIRTLLLRFGGPATERPF 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V R GM A+ + + G + +A VP + L + +A+ P GA + Sbjct: 211 NQIAPVTRGVVYGMFFTALSQAALAGIGFGVARVPEALLLTFLLFFLALFPMGAVAVWLP 270 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 S LL +G +W AI + ++ ++P +G ++PF+ G++GG+ G Sbjct: 271 ASFTLLAQGRTLAFLLFLVWNAIVVGGIENVIKPLFIGRSSEMPFILILLGVLGGLEAFG 330 Query: 325 LLGLFIGPVLMALIAVIWKESI 346 ++GLFIGPV++ ++ +W+++I Sbjct: 331 IIGLFIGPVILVILQTLWQDAI 352 >gi|145219109|ref|YP_001129818.1| hypothetical protein Cvib_0294 [Prosthecochloris vibrioformis DSM 265] gi|145205273|gb|ABP36316.1| protein of unknown function UPF0118 [Chlorobium phaeovibrioides DSM 265] Length = 360 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 147/358 (41%), Gaps = 13/358 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ + I+ +++FI + ++ F + A I + P+Y+ + + A Sbjct: 3 SLKANRVILLVIVLFISAIFFVMIRYFLMAIFLAAIFSALAMPLYNRILGWVGGRKSLGA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIPGGMWAS 120 + + + + ++PL+ L ++ E+ + + I + L +P Sbjct: 63 AVTMMIIFIMGVLPLVALLGIVAIQAVEISRQAAPWVRQMIEPAFLDQQLQSLPFYPEMV 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + T + + + F ++ + +FFF RD Sbjct: 123 IYREDIMQ--------RVTEVASKTGTVLFNTLFSFTYSAVNELFLFFIFLYTVFFFLRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S+ + + L A ++ V R+T G I+ +G + G A +AG+ S Sbjct: 175 GRSLLETILYYLP-LSDADQHRLLDKFLSVTRATIKGTMIVGTVQGTLAGLALHIAGIES 233 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + +++++P G P+ + +I L G+ A + L+ +I + +D LRP Sbjct: 234 ALFWGTMMTVLSVVPVLGPPLVWVPAAISLAFVGHYPQALGVLLFCSIVVGQIDNILRPI 293 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 LVG +L L FFG +GG+ GL G IGP++ AL +W+ A ++ I Sbjct: 294 LVGRDTRLHELFIFFGTLGGIGLFGLFGFIIGPIIAALFMTVWEMYGDAFSDSLRDIK 351 >gi|78186116|ref|YP_374159.1| hypothetical protein Plut_0228 [Chlorobium luteolum DSM 273] gi|78166018|gb|ABB23116.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 356 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 140/342 (40%), Gaps = 13/342 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++ F + A I S P+++ F+ A + ++++ + +PL Sbjct: 20 ALFFAMIRYFLMAIFLAAIFSALSMPVHNRFLQWTGGRKGLSAGLTMLALILIGFLPLAL 79 Query: 81 LFYYGMLEMKELVSKVVLANQHGIP---VPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L L+ + S+ V + + + L +P L Sbjct: 80 LLGVVALQAVHISSQAVPWLKQILEPAFLADQLRTLPYYPELVAYREDILQRVGE----- 134 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + +N + + F ++ + + +FFF RDG + +++ + Sbjct: 135 ---IVSNTGSLLFKKLFSFTYSAVNELFLFMIFLYTMFFFLRDGKPLLERVLYYLP-MSD 190 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 A +++ V R+T G I+ + +G + G A L G+ S + G I +++++P Sbjct: 191 ADQQRLLDKFLSVTRATIKGTMIVGVVQGGLAGMALHLGGIESALFWGTIMTVLSVVPVL 250 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G PI + I L G A + L+ AI + +D LRP LVG +L L FFG Sbjct: 251 GPPIIWVPAVISLAASGRFPQAIGVALFCAIVVGQIDNILRPILVGRDTRLHELFIFFGT 310 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GG+ GL G IGP++ AL +W+ A ++ I + Sbjct: 311 LGGIGLFGLFGFIIGPIIAALFMTVWEMYGEAFSDSLRDIKT 352 >gi|300023545|ref|YP_003756156.1| hypothetical protein Hden_2034 [Hyphomicrobium denitrificans ATCC 51888] gi|299525366|gb|ADJ23835.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 354 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 141/350 (40%), Gaps = 9/350 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +T+ I ++ + +S + ++ + I+ +PIY S F Sbjct: 9 DQTVAIDLAIRISLLTLLAYLSFAIVAPVLTILVWSAILTVALYPIYRWLAHWL-NSPKF 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A T+ M + + P+ +L + + ++ +V K+ P P + D P G Sbjct: 68 AAAFVTLLCMLVVLAPVTWLGFGLLNGVEVIVQKLDSGLSIPAP-PESIKDWPIAGDQIY 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 LWT+ ++ S LK + + L L + II F + Sbjct: 127 RLWTRAITDISSQLAELAPALKPVAGWLL-----QVASNVLIGLLKFLLSIIVAGFLFCP 181 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + L + E + ++ + IR+ G+ +A+ + + G + +AGVP Sbjct: 182 GPKLVKVLARIMERVLNPRGTEMVELAGATIRNISRGVLGVALLQSFLGGIGFLVAGVPG 241 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ++ ++ G + F + ++ + +A + + + ++D LRP L Sbjct: 242 AGIFAFASLVLGILQIGPGVLFLPILVWSWMTQEALHALLFTAY-MVPIGLLDNVLRPIL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + P L G++GG G++GLF+GP+++++ + + + K Sbjct: 301 MTRGLTTPMLVIVIGVIGGTIAYGIIGLFVGPIILSVAWELGQAWMNGTK 350 >gi|157961667|ref|YP_001501701.1| hypothetical protein Spea_1843 [Shewanella pealeana ATCC 700345] gi|157846667|gb|ABV87166.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 383 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 134/352 (38%), Gaps = 8/352 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++LV + +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQKLERALKGRRGLAATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 ++ + L I P + + +V+ + + + ++DIP G + W Sbjct: 79 LAGIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQRVADIPLIGDKLFDAWALF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + +KT S G + I + F S Sbjct: 139 ATNLEKAVLHFLPQIKTGVSAAAGMLGSSLGT-----LVMFIISLAIAGGFMAHAEKSSA 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + ++ + + IRS LG+ +A + L++GSA + +P+ Sbjct: 194 AVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSALFTFSIPAAGIFTF 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I+ + + + Y+ + AT +W + + D L+P L+G + Sbjct: 254 IVFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVW-VLIAGVSDSFLKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P G +GG+ G++GLF+G V++A+ ++ + + Sbjct: 313 VPMPVILIGAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLASAKE 364 >gi|228470697|ref|ZP_04055548.1| hypothetical protein PORUE0001_1322 [Porphyromonas uenonis 60-3] gi|228307554|gb|EEK16550.1| hypothetical protein PORUE0001_1322 [Porphyromonas uenonis 60-3] Length = 401 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 115/319 (36%), Gaps = 19/319 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + + VL AL I + +K ++ A + TV + F++P+L + + Sbjct: 40 LPYMSGVLGALTIYVLLRGQMKWLVERKHWGRSWAASLLTVEAIFFFLIPILGIVLMLID 99 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + N + + ++L S+ Sbjct: 100 LFSTFDPE--SLNVLTTQAQEMIQQVEDRFGIELWSEENLQKLTSVST------------ 145 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + L+ ++ L+F R ++ L + +S Sbjct: 146 ---SLVKGLLQGMSSFFLNAFVILFLLYFMLRGYDHFESAVEELLP-FTGKNKRTVSSET 201 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 +++S +G+ ++A+ +G+ Y + GV + V+T +IP G I + ++ Sbjct: 202 ISIVKSNAIGIPVLALVQGVFAYIGYLIFGVEDALLFAVLTTFTTIIPVLGTMIVWVPMA 261 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + I G+ NA L +G I + VD R L + L T FG+ G+ G Sbjct: 262 IIMGINGDWLNAILLGAYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFW 321 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ GP++++LI + Sbjct: 322 GVIFGPLILSLIVLFINLY 340 >gi|313156951|gb|EFR56384.1| putative membrane protein [Alistipes sp. HGB5] Length = 382 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 127/329 (38%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + + L F +L A I + + + A + + Sbjct: 33 VLILGLGITICIELTPFLGGLLGAATIYVLLRRQMQVLTACRRWRRSLAASLLLAEAVLC 92 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VP+ + + + + V + L I + ++ + LW + Sbjct: 93 FLVPISLIVWMVVNQ----VQDITLRPDSIITPLKHIAALIHEKTGYNLWQEEN------ 142 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ I IP+ D+ ++I+ ++ L+F G + + + Sbjct: 143 --------ISSMIGMIPKLGQWVVSSIFDFGVNIVVLLFVLYFMLIGGRRMEEYCREILP 194 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + R V ++RS +G+ ++A+ +G+V Y + G PS + GV+T + Sbjct: 195 FDSSVSGS-VMREVHMIVRSNAIGIPLLAVVQGIVAYIGYLIFGAPSPLFWGVLTCFATI 253 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ Y+ + G A L L+G + + VD +R + L T Sbjct: 254 IPIFGTALVWLPLAGYMALAGEWGPAVGLTLYGGLVVTHVDNVVRFVMQKKLADTHPLVT 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG+ G+ G +G+ GP+L+ + Sbjct: 314 IFGVFIGLSLFGFMGVIFGPLLLEMFVFC 342 >gi|227822502|ref|YP_002826474.1| hypothetical protein NGR_c19580 [Sinorhizobium fredii NGR234] gi|227341503|gb|ACP25721.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 370 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 63/344 (18%), Positives = 134/344 (38%), Gaps = 7/344 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ SL + F + A I+ +P++ + + A TV + + Sbjct: 31 VLALFAYWSLTLVAPFAIIAIWAGILAVALYPVFRALAALFGGRPRLAAAAITVVALAVI 90 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 PL + ++ +++K+ P + D P G W W + + ++ Sbjct: 91 AGPLAAIALSFAEAVQAVLAKLASGTLVVPAPPDAVRDWPLIGNWLHAAWAQASGNLEAT 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L G + + A G+ + + +S+I F +R G + + L Sbjct: 151 LQRLAPSLLQAGGTVLGKIAG-IGVDLIGFIVSVIIAG----FLFRPGPRLGEGLKLFAR 205 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + IR+ G+ +A+ + L+ G A+ L G+P+ L I + Sbjct: 206 RVAGERGAGFVDLAGATIRNVARGVIGVALLQALLAGLAFSLFGIPAASVLAFAVLIFCI 265 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G V+I+ L L + + ++D L+P LV +K P L Sbjct: 266 MQIGPAPVLLPVAIWAWTAMETRATLGLTLI-LVLIGLIDNVLKPVLVARGLKTPMLVIL 324 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++GG + GL+GLF+GP+++ + + + ++ +++ Sbjct: 325 AGVIGGTLSYGLIGLFLGPIVLGVFYDLVVAWMRSVPRPEDETK 368 >gi|168699365|ref|ZP_02731642.1| hypothetical protein GobsU_07587 [Gemmata obscuriglobus UQM 2246] Length = 384 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 126/335 (37%), Gaps = 12/335 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I +S F + + + +WP+ S + + T AV+A+ V+ L VP Sbjct: 48 IGLSAALAVPFLPALTWGVALAIIAWPLSSWL-RRVTANRTCAAVVASAVVILLVAVPSG 106 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 ++ E+ + G + M A+ + ++ + ++ E Sbjct: 107 YVAQQVAREVSSSTEQAQQEAVQGT--------LRERMLATPVLRDAVAWAERPEVNLEA 158 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 K +++ + + L + I L++ RDG + L + P Sbjct: 159 EAKKAAREYLGN-GMWLARGSVAFLLQLAIAIYILYYSLRDGDQFLRAARRLLP-VTPEE 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 ++ + + + + G+ +W G+P+ + GV+ +++M+P G Sbjct: 217 ADRVFDRAGGSVHANLYASLVTSAINGVNAALLFWATGLPAPILWGVVVFVVSMLPVAGI 276 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + YL + + A L WG +VD L +L GG ++L +P +G Sbjct: 277 FLIWVPAAAYLALTDHWGGAVALVAWGVGSSVLVDTLLYTWLAGGRMRLHPVPALLSFIG 336 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G G+ +GP ++A+ + + Sbjct: 337 GLALFGASGIVLGPAILAVTVAVLDVWHTRTTNSP 371 >gi|289523414|ref|ZP_06440268.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503106|gb|EFD24270.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 364 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 141/348 (40%), Gaps = 7/348 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVS 69 + + L+ + + P++ ++I+ F S P+ K + + A+I Sbjct: 17 FLIVFALLALLGISITEPIVRPLMWSVILSFFSHPLNKLLYVKVFRGKRRNLAALITAGC 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ L VP+ F+ E +S + L + W S + + Sbjct: 77 VVLLICVPMGFIGISLAREALRFISSLSDNLESIQETFAGAWASLVNRLPDYVIQYFGIK 136 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 P L+ L+ + + F+ + + ++ F+ RDG + + Sbjct: 137 GDPSFLRDLTHRAVNYVISS-LGDFSRGLLGNAFKMVYQLFVISVSTFYLLRDGHVVIEY 195 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 LD + L + +++++ +G T+ A + + + ++ G+P+ + GV+ Sbjct: 196 LDDILP-LPKEERASLFTSATRMMKAVVIGTTVTAGIQACLGVAGWFFLGLPAPLLAGVL 254 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I AMIP G P ++YL + GN+ + L W + + +D +RP + + Sbjct: 255 LFICAMIPFIGTPFVLIPAAVYLFLMGNVKESIILAGWALLVVSTIDNLIRPLFISEGSR 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + FL F G+VGG+ G LG+F+GP++++L +E Sbjct: 315 VHFLLVFLGVVGGIHVWGFLGIFLGPIVLSLFIFFLDCYRRIWSTKRE 362 >gi|54308755|ref|YP_129775.1| hypothetical protein PBPRA1562 [Photobacterium profundum SS9] gi|46913185|emb|CAG19973.1| putative membrane protein [Photobacterium profundum SS9] Length = 373 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 142/346 (41%), Gaps = 8/346 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI++V Y +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALLPLTQKLQNMLGGRRGLSATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 + + L + P + + + L V + ++DIP G E+W+ Sbjct: 79 ILGITLLVAPFVLVSGSIFDAVTHLTDIVQSGEIKISGPTQRIADIPVIGGKLFEVWSLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +KT + AS G + I + F + S+ Sbjct: 139 STNLEKAVTHFLPEIKTA----VGAMASLVGSSLAS-LVMFIISLAIAAGFMTHSIACSE 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + + ++ + + IRS LG+ +A + +++G+ ++ GVP+ + + Sbjct: 194 AIGTVAVRVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQSMLVGAGMFVFGVPAAGLITL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ + A I V Y+ + +AT +W + I D L+P L+G + Sbjct: 254 GVLILGIAQLPALIIVAPVIFYVFSTQDTTSATIFTVW-VLLAGISDNFLKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P G +GG+ G++GLF+G V++A+ ++ + ++ Sbjct: 313 VPMPVILIGAIGGMLAAGIIGLFLGAVVLAIWYELFVTWLKLDQDE 358 >gi|78357491|ref|YP_388940.1| hypothetical protein Dde_2448 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219896|gb|ABB39245.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 415 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 132/327 (40%), Gaps = 7/327 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL-FIVPLLFLFYYGML 87 F + A+++ +P+Y+ + + S LA +A + +C+ +PL + Sbjct: 70 PFLHTFIMAIVLSAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPLFIFVTGLIP 129 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGG--MWASELWTKHLSHPQSLKILSETFLKTNG 145 + + V+ V H + + W + + L+ +F + G Sbjct: 130 QAVQSVTAVNNWINHTDFDQLFGAGRLEQYLAWVHQHLPFIDASKIDLRAEFISFSRRMG 189 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G + ++ ++I FF +DG + Q+ L I Sbjct: 190 QTLLEGGTYLLGNALTLFFQFLLMLLIV-FFMLKDGKKML-QVVKYMCPLHEDQEDAILL 247 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + V +S +G ++A +GL G L G+P + G + +++P G + + Sbjct: 248 NLRSVSKSVLVGGLLVAALQGLAGGIGLALVGIP-ALFWGTVMGFASLVPVVGTGLVWMP 306 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +YLL+ G ++ LF+W A+ + +D LRP+ + G + F ++GG++ G Sbjct: 307 ACLYLLLMGQWQSSLFLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFIFMSIMGGIKVFG 366 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ GP+++ V+ + E Sbjct: 367 MAGVLYGPLILGFTMVMLRLYGEEFSE 393 >gi|127511625|ref|YP_001092822.1| hypothetical protein Shew_0691 [Shewanella loihica PV-4] gi|126636920|gb|ABO22563.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 377 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 127/348 (36%), Gaps = 7/348 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ +++ + ++ F P L II P+ + A + Sbjct: 17 MTESAIRIGLLAILVIWTYDIVRPFIVPALWGAIIAVALMPLTHRLERMLKGRRGLAATL 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + + L + P + + + + + H + +++IP G E+W Sbjct: 77 IALVGIALLVTPFVVVSGSIFEGVSNTLKVLQSGEIHLPEPTQRVAEIPIIGERLFEVWH 136 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S+ + + +K S + I ++ F + Sbjct: 137 NIASNLEKAILHFLPEIKAGFSALAGVIGSSLAT-----LVMFIISLLIAAGFMANSEQC 191 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + + IRS LG+ +A + +++GSA ++ G+P+ L Sbjct: 192 AAAMSKVAVRAVGPNAHAWTSLTAATIRSVLLGVVGVAFIQAMLIGSALFVFGLPAAGLL 251 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + + A I + Y +AT +W I D L+P L+G Sbjct: 252 TLVALFLGIAQLPALIIVLPLIGYAYSSMEGTSATIFSVW-IFLGGISDNILKPMLMGRG 310 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + +P G +GG+ G++GLF+G V++A+ ++ + + Sbjct: 311 VDVPMPVILIGAIGGMLFAGIIGLFLGAVVLAIWYELFIAWLNGGEPE 358 >gi|153006036|ref|YP_001380361.1| hypothetical protein Anae109_3181 [Anaeromyxobacter sp. Fw109-5] gi|152029609|gb|ABS27377.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 419 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 127/322 (39%), Gaps = 8/322 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y F P+L A I P++ + A + + +V+ + P+ +L Sbjct: 83 YVASPFAKPILLAATIAAILDPVHLRLTAALRGRRAASAGVLSAAVVAAIVGPVAYLVTA 142 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ V + A + V ++ +P + P +L+ E F Sbjct: 143 FVWQVVAGVRWLRAALESEG-VSGLVARLPEPLRKIATDVTA-DMPLALERAREAFEGAG 200 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + S G ++ + M++A++F +G + + LD + L P +++ Sbjct: 201 GAAAVGGLISATGT----LVVNTLVMVVAVYFLLAEGHRLIEWLDEMTP-LEPGQLRELL 255 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + A + + + + +AGVP ++T + A++P GA + Sbjct: 256 ATFNGAVGAVVVSALATAGVQAALAFAGFLVAGVPQPAFFAIVTFVAALVPLVGANLVVL 315 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+ + G+ A L LW + VD L+P L+ + + F L+GG+ T Sbjct: 316 PVAAFHFAAGHTVAAGLLALWSLGVVGTVDNLLKPVLMRRGLSVHVSLVFLALLGGLSTF 375 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 G G+ +GP+ +A + Sbjct: 376 GAAGIIVGPLALAFFLAAVRMW 397 >gi|218676834|ref|YP_002395653.1| hypothetical protein VS_II1074 [Vibrio splendidus LGP32] gi|218325102|emb|CAV26948.1| putative membrane protein [Vibrio splendidus LGP32] Length = 366 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 128/343 (37%), Gaps = 7/343 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ L+ F V+ II +P+ + +K S + + + + L +P Sbjct: 23 MLVYWCFAILRPFILLVIWGAIIATALYPVAVAISNKTGMSKGKASALLSFIGVILLFIP 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKIL 136 L L +L++ + L DIP G ++ + I Sbjct: 83 LAALSSGIYTSASDLMTGLQDGTLSLPKPKESLQDIPFIGEKVYSTLVAASNNIEGTFIK 142 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 LK G F+ + +S I F + + L L Sbjct: 143 YADELKQFATK-AASVLGSLGGGFIQFIISTIIAGA----FMSNADKCQTGVTHLVARLT 197 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 198 DGKGEELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAAFWALAVLLIAIIQL 257 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ IY+ + A+ +W I + D L+P L+ +P L G Sbjct: 258 PPILALLPAIIYMFSVESTLAASLFLVWC-ILVSGSDAILKPMLLSRGSHIPMLVILLGA 316 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ G++GLF+G V+++L + + ++N+E+ Sbjct: 317 LGGMAMSGIVGLFVGAVILSLSYELMMAWLGLEEKNQEETEKK 359 >gi|312881082|ref|ZP_07740882.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] gi|310784373|gb|EFQ24771.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] Length = 370 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 8/324 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 + P+ + F + P++++ + A + ++ +C + P+ +L + Sbjct: 35 VTRPLVRPLAWGAVAAFLTHPLFAALNRRTRGHCPGLCATLTLLAALCFVLAPVSYLVTF 94 Query: 85 GMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E LV+ + A G W S +P + + L + L Sbjct: 95 LGQETSALVAAIARFNAQIQGGTPELWFSKLPPRIQET---LGPLLQDRRLWGELVQKAG 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + +S + +++ FF RDG S+ L S L + Sbjct: 152 LWVGGLVAAGSSGLLQGTATFLYEASLALVSTFFLVRDGASMVAYLGSALP-LPGEQKRA 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 ++RS G+ + + ++ G +W+AG+P+ V G + + M+P G + Sbjct: 211 FLERSRDLLRSVLFGVLLTVALQAVLGGLGWWVAGLPNPVFSGFLMFLFGMVPLVGTALI 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +YLLI G+I L LWGA+ + VD+ LRP + G P G++GG+ Sbjct: 271 WVPGGVYLLIAGHIKAGVLLLLWGALVVGSVDQFLRPLFISGRGGAPTFLVLLGILGGLS 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G LG+F+GP+ +AL V++ Sbjct: 331 AWGFLGIFLGPLALALFLVVFDTY 354 >gi|209551614|ref|YP_002283531.1| hypothetical protein Rleg2_4043 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537370|gb|ACI57305.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 385 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 129/332 (38%), Gaps = 7/332 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I ++ + F V+ + I+ +PI+ + A I V + L Sbjct: 32 IIGLFAYWTIVLIAPFALIVIWSAILAVALFPIFQALCRLLGNRPVIAASIIVVFCLVLI 91 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I PL + + L+ K+ + P + + P G + W + S + Sbjct: 92 IAPLALVAVNFADTAQALIGKLRVGEFTLPSAPAAIREWPVVGERLHDAWNQIASDLAAT 151 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + ++ + + AS G L + +SI+ I F ++ + L Sbjct: 152 IIKFQAPIREVTAVIVTKLAS-IGGGVLSFVVSIMLSGI----FLTRSARLAAAIQVLAN 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +R+ +R+ G+ +A + L+ G + GVP+ AL + + + Sbjct: 207 RIAGEKGVGFARLAGATVRNVSRGVIGVAFLQTLLCGLCFAFFGVPARGALTFVIFMFCL 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G + V I+ + A + + ++D L+P L+ + P Sbjct: 267 MQLGPGLVLLPVIIWSWFSWSPAAAFAFTA-ITVPIMLIDNILKPVLMARGLSTPMPVIL 325 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G++GG + GLLGLF+GPV++++ + K Sbjct: 326 IGVIGGTLSHGLLGLFLGPVVLSVFYELLKAW 357 >gi|312883995|ref|ZP_07743712.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309368453|gb|EFP95988.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 361 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 138/346 (39%), Gaps = 10/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ + ++ A II +PI+ + ++++ + Sbjct: 12 KVLIIALLLAGFACFLLVEPYINSIVMAFIISLLMFPIHERVERYLPKHRNISSLLSCII 71 Query: 70 VMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + PLLF+F + + + + V W+ + + Sbjct: 72 LTFIIVFPLLFVFAAIIQQGSTFSQSVYQWVTTGGIQTAFEHPWV--VKSLAIINNYLPF 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 PQ + F + G + A G ++ ++ M+ LFF RD I Sbjct: 130 DSIAPQEIAQKVAQFSTSFGTRLVGLSAKILGDAT-NFLMNFFLMLFVLFFLLRDHEKII 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L + K+ V +V +S +G + AI +GL G +AG P + G Sbjct: 189 SAIRHILP-LSRSQEDKLLDEVEQVAKSAVMGSFLTAIAQGLAGGIGMAIAGFP-ALFWG 246 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + IP G + + S+YLL+ G A L + + +D LRPFL+ G Sbjct: 247 TMMGFASFIPVIGTALIWIPASLYLLLTGETGLAIFLAGFSVFVVGSIDNLLRPFLMQGN 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L FF L+GG+ GL+GL GP++ A+ V++ + Sbjct: 307 GGMNTLMIFFSLLGGLHLFGLIGLIYGPIIFAVTVVLFHIYEEEFQ 352 >gi|117921351|ref|YP_870543.1| hypothetical protein Shewana3_2910 [Shewanella sp. ANA-3] gi|117613683|gb|ABK49137.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 369 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 130/348 (37%), Gaps = 8/348 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 M++ + F +L A+I+ +P + + + A + V + + Sbjct: 26 MLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLSDKQGRAATLLIVIGLMIL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P + + M LV +V +++IP G + W K + SL Sbjct: 86 VLPTIMMVSSMTDNMGSLVERVNQNTLEVPTPKESIANIPFVGAKIYDFWLKASTDLPSL 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L I AS L S I I + + G + +Q + Sbjct: 146 VKSLQPHLGDAAKQVIHALAS-ISASLLMSMFSFIIAGIMMAY----GHAGAQSSARIAT 200 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P K+ I IR+ LG+ +A + L++G AG+P ++ I+ Sbjct: 201 RIAGPERGAKLVNICSSTIRAVALGVIGVAFIQALLIGIVMTFAGIPLVGIFFILVLILG 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + A + Y+ + G+ + ++ I VD L+P +G + P Sbjct: 261 IAQIPALLVTLPAIAYIWMAGDNGTVGSIIYTVLLILAGAVDNVLKPIFLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G+LG+FIG L+++ I+ + E + + Sbjct: 321 VLIGALGGMATSGILGMFIGATLLSIGYRIFMMWVDEGLEEGLREQDD 368 >gi|283781384|ref|YP_003372139.1| hypothetical protein Psta_3618 [Pirellula staleyi DSM 6068] gi|283439837|gb|ADB18279.1| protein of unknown function UPF0118 [Pirellula staleyi DSM 6068] Length = 542 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 7/238 (2%) Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P W +EL + L+ + + S I ++ M+ A Sbjct: 215 PYRAWLTELANPTDEQIEDLRQST----LLTASSPLVSLGSDTVAIVGKLAFGVVIMVAA 270 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF + +G + L L Y +++ +V R+ + A+ +G++ G + Sbjct: 271 LFFLFAEGGKMLNAAIRLSP-LEERYVRELVGEFDRVCRAVVAATLLSAVAQGILAGIGF 329 Query: 234 WLAGVPSHV-ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + AGV V L V+T ++A++P GA + SIYL G+ A L ++GA + Sbjct: 330 YFAGVQHAVALLMVLTCVLAIVPFTGAAAVWIPTSIYLYYDGHTTAAILLAIYGAAIVST 389 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 D ++P ++ G L L ++GG++ +G +G+ +GP+++ + + K + Sbjct: 390 ADNIIKPLVLHGQSNLHPLLALLSVIGGIQALGPIGILVGPMVVVFLQTLLKLLQREL 447 >gi|218888166|ref|YP_002437487.1| hypothetical protein DvMF_3082 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759120|gb|ACL10019.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 397 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 136/336 (40%), Gaps = 6/336 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ F ++ + +P++ + SS A++ ++ ++PL + Sbjct: 37 VESFLHTLILGAVFSAICYPLHLRCKTLVRGSSIVSALLVLTGLVVCIVIPLCVFVALLI 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + V+ + G P P W + +T Sbjct: 97 PQGMQTVTAINKWLSGGGPAALLSESNLEPWLQWVRVNLPFIDLSHIDFQTNLLQMSRTA 156 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G I ++ S + + L + +++ +FF +DG + + + L L I Sbjct: 157 GQTLI-QWGSYVLGNTMLFFLHFLLLLLVMFFMLKDGKRMVEGVKYLCP-LREEQEDMII 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 + + +V R+ +G ++A+ +G++ G + G+P + G + +++P G + + Sbjct: 215 QSLRRVARAVLVGGLLVAVVQGVLGGLGMAIVGMPG-LFWGTVMGFASLVPVVGTGLVWG 273 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 SIYLL+ G A L LW ++ + D LRP+ + G F ++GG++T Sbjct: 274 PASIYLLLMGQWKGAVFLVLWCSLVVAGADSFLRPYFMRGSSGASVFYIFLSILGGLKTF 333 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ G+ GP++++ V+ ++ ++N Sbjct: 334 GMAGIIYGPLILSFTMVMLNLYGEEYRDILAPQTAN 369 >gi|317153667|ref|YP_004121715.1| hypothetical protein Daes_1960 [Desulfovibrio aespoeensis Aspo-2] gi|316943918|gb|ADU62969.1| protein of unknown function UPF0118 [Desulfovibrio aespoeensis Aspo-2] Length = 366 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 139/335 (41%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F ++ + ++ P+++ + + ++I ++ ++P+ FL Sbjct: 34 IVEPFLHTMIFSTVLAVLFSPVFAWVLPAVKGHRNIASLITVAIIVFCLLLPMTFLVMAL 93 Query: 86 MLEMKE-LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + E LV+ + G+ + G + + L + S + Sbjct: 94 ISQGVESLVTLNAWVAKGGLDSLASSERLEGYLLWFQRELPFLRISEIDLQASIIQYSRD 153 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L + M+ LF+F RDG + + L L P I Sbjct: 154 FAQLMIGAGTELVRNAAILVLHFLLMVFILFYFMRDGAKMVAYVKLLSP-LRPRQEDYII 212 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 + +V R +G ++A+ +GL G+ + G+P G + A+ ++IP G + + Sbjct: 213 DSLRRVARGVLMGCLLVAVLQGLAGGAGLAVVGIP-AFFWGAMMALASLIPVLGTGLVWV 271 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +LL+ G AT L LW I + +D LRP + ++ F ++GGV T Sbjct: 272 PAVGFLLLSGQWKEATLLALWCGIVVVGIDTILRPIFMREASRVSTFYIFLAILGGVYTF 331 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+LG+F GP++++L+ V+ + + E+ + Sbjct: 332 GMLGIFYGPLILSLVMVMLQIYVEEYAEDLKDCEE 366 >gi|296106318|ref|YP_003618018.1| transmembrane permease [Legionella pneumophila 2300/99 Alcoy] gi|295648219|gb|ADG24066.1| transmembrane permease [Legionella pneumophila 2300/99 Alcoy] Length = 283 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 146/274 (53%), Gaps = 3/274 (1%) Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHP 130 LF++PL +L + E + ++ + N+ G P + +IP G + W ++ P Sbjct: 3 LLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKP 62 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S+K T + + G+ + F ++ LFFFYRDG + Q+ Sbjct: 63 GSIKEFLSNLHVTLTPT--SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQIQH 120 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G ITA+ Sbjct: 121 IGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFITAL 180 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 181 AAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFL 240 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 241 AVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 274 >gi|329115312|ref|ZP_08244066.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] gi|326695291|gb|EGE46978.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] Length = 360 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 140/335 (41%), Gaps = 7/335 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L +++ L+ F ++ A I T WP+ S + + LF++P Sbjct: 30 LVLGAVWILEPFIPALIWAGTIAVTMWPLLLRLQGWLHGSRKMAISCTLLVALALFVLPF 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + + + +P +P L +P G + + W + + Sbjct: 90 WMAVSTVVKHADAFSNIIPYIKSLKLPDLPEKLLHLPMVGEYLGKWWQHLQNMKPMDIVQ 149 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + ++ +A GM+ + + L++I + + F + + L L Sbjct: 150 QAVPQPDQIMHYLMSYAGSIGMLAVQFLLTLIILTV----FLAKAEYLITTSERLVGTLS 205 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + + IR LG+T+ AI E LV G +L GVP L +T + ++ Sbjct: 206 GKRGQNMLELAVRTIRGVALGVTLTAIVESLVGGGGMYLTGVPWASILTAVTFMACLLQA 265 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G ++ I++ + A L + +F+ D LRP+L+ +P + G+ Sbjct: 266 GPGVTLFPAVIWVYFDKGVMPAIVLLAITFLTIFL-DNMLRPYLIRKQADVPLVLIMMGV 324 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +GG+ +GL G+F+GP+++++ + K+ + + +E Sbjct: 325 IGGLAALGLAGIFVGPMILSITYTLIKQWMESNQE 359 >gi|167624368|ref|YP_001674662.1| hypothetical protein Shal_2445 [Shewanella halifaxensis HAW-EB4] gi|167354390|gb|ABZ77003.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 383 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 137/345 (39%), Gaps = 8/345 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI++V + +K F PVL II PI + A I Sbjct: 19 ESAIRIGLLFILIVWTFDIIKPFVIPVLWGAIIAVALMPITQKLERALKGRRGLAASILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 ++ + L I P + + ++ + + + ++DIP G ++W Sbjct: 79 LAGIILLIAPFWIVSSSIFDGVTHMIEVLQSGDVDIPGPTQKVADIPLIGDKLYDIWALF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + +KT S G + I + F + Sbjct: 139 ATNLEKAVLHFLPQIKTGVTAAAGMLGSSLGS-----LVMFIISLAIAGGFMAHAEKSAA 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + + ++ + + IRS LG+ +A + +++GSA + +P+ Sbjct: 194 AVSTVAVRVAGKHGEEWTSLTAATIRSVLLGVVGVAFIQSILIGSALFTFSIPAAGIFTF 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I+ + + + Y+ + AT +W + I D L+P L+G + Sbjct: 254 IVFILGIAQLPPLLVVLPLIFYVFSTHDSTPATIFTVW-VLIAGISDSFLKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P G +GG+ T G++GLF+G V++A+ ++ + +E Sbjct: 313 VPMPVILIGAIGGMITAGIIGLFLGAVILAIWYELFITWLKTEEE 357 >gi|327190039|gb|EGE57156.1| hypothetical protein RHECNPAF_470031 [Rhizobium etli CNPAF512] Length = 400 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 130/332 (39%), Gaps = 7/332 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +L + F V+ + I+ +PI+ + AV+ V + L Sbjct: 47 IIGLFAYWTLVLIAPFALIVIWSAILAVALFPIFEALSRLIGNRPVIAAVVIVVFSLVLI 106 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I PL + + L+ K+ N P + + P G W + S + Sbjct: 107 IAPLALVAVNFADAAQALIGKLREGNFTLPAAPAAIREWPVVGERIHGAWNQIASDLAAT 166 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + ++ + + AS G L + +SI+ I F ++ + L Sbjct: 167 IIKFQAPIREVTAVIVAKLAS-IGGGILSFVVSIVLSGI----FLTRSARLAAAIQILAS 221 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +R+ +R+ G+ +A + L+ G + L +P+ L I ++ + Sbjct: 222 RIAGEKGVGFARLAGTTVRNVSRGVIGVAFLQALLCGLCFALFDIPASGPLTFIVFVLCL 281 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G + V ++ A + AI + I+D L+P L+ + P Sbjct: 282 MQLGPALVLLPVILWAWFSWPTPIALVFTVV-AIPIMIIDNILKPILMARGLSTPMPVIL 340 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G++GG + GLLGLF+GPV++++ + + Sbjct: 341 IGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 372 >gi|206890655|ref|YP_002249261.1| hypothetical protein THEYE_A1463 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742593|gb|ACI21650.1| membrane protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 357 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 14/337 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ I + ++ LK FFA A++I P++ K + AV+ + V Sbjct: 19 ILLLFIGILGYLNYQILKSFFASAGWAIVIALVFHPVFDYL-KKFLKYRGLTAVVTIILV 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF+ P +++ Y +LE EL+ G+ +P +++I S++ K Sbjct: 78 IVLFLFPFVYVSYQIILEAGELI--------KGVNLPELINEIMSHPLLSKILEKLSFIT 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQ 187 E +K + A R F L L++I FFF +DG ++ Sbjct: 130 GGDIASLEIIIKNELSGLLKEGALRIAHGFGDILSLFLNLILTFFIAFFFLKDGHHFVKK 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ I + +I +TF G +IA+ +G +LG ++ +PS G Sbjct: 190 IEEFLP-FAEVDKTSIRNQIRNIIYTTFYGGILIAMLQGTILGITFYFLDMPSSTLWGFA 248 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA+ + IP GA + SIYLL KG I L + GA + ++D L+P ++ G +K Sbjct: 249 TAVASFIPVLGAFAVWGPASIYLLAKGLIIKGLILAMVGAFIISLIDNVLKPLIIKGKVK 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP + F ++GG++ GL+G IGP++ +L + Sbjct: 309 LPLIFIFLSVLGGIKIFGLIGFIIGPLVFSLFVSFLE 345 >gi|193782592|ref|NP_435597.2| hypothetical protein SMa0665 [Sinorhizobium meliloti 1021] gi|193073048|gb|AAK65009.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 384 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 135/333 (40%), Gaps = 7/333 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ S + F ++ A I+ +P Y++ + + A++ T+ + + Sbjct: 34 LVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGQRPRVAALVITMLGLLVI 93 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL + + ++ +++++ + P + P G +W+ + +++ Sbjct: 94 VAPLAAIAFSFAEGLQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWSMASDNLEAV 153 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G + + AS G L + +S++ F + G ++ Sbjct: 154 LQQIKPALLQAGSKALGKIAS-IGADLLSFVVSVLVAG----FLFGSGARLANSAQGFAS 208 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ IR+ G+ +A+ + + L VP+ A+ + I+ + Sbjct: 209 RMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCILILSLFKVPAPGAIAFVVLILCI 268 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I G ++ V ++ A LF I L I+D ++P LV + P L Sbjct: 269 IQIGPALALLPVIVWAWTSMEFGMA-ALFTILLIPLLIIDNVMKPILVARGLSTPTLVIL 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG + GL+GLF+GP+++++ + + Sbjct: 328 LGVLGGTLSYGLIGLFLGPIVLSVFHSLLLIWM 360 >gi|307303487|ref|ZP_07583241.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306902878|gb|EFN33470.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 359 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 122/332 (36%), Gaps = 13/332 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F + AL++ P++ + A + VPL F+ Sbjct: 39 CYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLR-YPEAAAAATVAIAAFVVAVPLTFMA 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + V A + G L++ P L + Sbjct: 98 ERLVNEAAKGAQIVEEAVRSGTWR-DALANYPRLAPVVVWIETQLDLAG---------IA 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ++ F++ F + + I LF+F RDG L L + Sbjct: 148 GSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQALGALKEYSP-LSSQEMNR 206 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + V + +++ G +A +G + G +WL G+P+ V G+ ++A++P GA I Sbjct: 207 LFTRVNETVQAVVFGTVAVAAVQGAMGGLIFWLLGLPAPVVWGLAMGLLAVVPVLGAFIV 266 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++ L + G A L WGA + +D L P VG +KL L F ++GG+ Sbjct: 267 WLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLHTLTAFMSMIGGII 326 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G GL IGPV + ++ + Sbjct: 327 VFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPE 358 >gi|307318663|ref|ZP_07598096.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306895690|gb|EFN26443.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] Length = 359 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 122/332 (36%), Gaps = 13/332 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F + AL++ P++ + A + VPL F+ Sbjct: 39 CYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLR-YPEAAAAATVAIAAFVVAVPLTFMA 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + V A + G L++ P L + Sbjct: 98 ERLVNEAAKGAQIVEEAVRSGTWR-DALANYPRLAPVVVWIETQLDLAG---------IA 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ++ F++ F + + I LF+F RDG L L + Sbjct: 148 GSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQALGALKEYSP-LSSQEMNR 206 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + V + +++ G +A +G + G +WL G+P+ V G+ ++A++P GA I Sbjct: 207 LFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPVVWGLAMGLLAVVPVLGAFIV 266 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++ L + G A L WGA + +D L P VG +KL L F ++GG+ Sbjct: 267 WLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLHTLTAFMSMIGGII 326 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G GL IGPV + ++ + Sbjct: 327 VFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPE 358 >gi|16264659|ref|NP_437451.1| hypothetical protein SM_b21335 [Sinorhizobium meliloti 1021] gi|15140797|emb|CAC49311.1| conserved putative membrane protein, possibly a permease [Sinorhizobium meliloti 1021] Length = 359 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 122/332 (36%), Gaps = 13/332 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F + AL++ P++ + A + VPL F+ Sbjct: 39 CYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLR-YPEAAAAATVAIAAFVVAVPLTFMA 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + V A + G L++ P L + Sbjct: 98 ERLVNEAAKGAQIVEEAVRSGTWR-DALANYPRLAPVVVWIETQLDLAG---------IA 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ++ F++ F + + I LF+F RDG L L + Sbjct: 148 GSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQALGALKEYSP-LSSQEMNR 206 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 + V + +++ G +A +G + G +WL G+P+ + G+ ++A++P GA I Sbjct: 207 LFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMVWGLAMGLLAVVPVLGAFIV 266 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++ L + G A L WGA + +D L P VG +KL L F ++GG+ Sbjct: 267 WLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVGDRLKLHTLTAFMSMIGGII 326 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G GL IGPV + ++ + Sbjct: 327 VFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPE 358 >gi|254227295|ref|ZP_04920727.1| hipothetical membrane protein [Vibrio sp. Ex25] gi|262396438|ref|YP_003288291.1| hypothetical protein VEA_001141 [Vibrio sp. Ex25] gi|151939907|gb|EDN58733.1| hipothetical membrane protein [Vibrio sp. Ex25] gi|262340032|gb|ACY53826.1| putative membrane protein [Vibrio sp. Ex25] Length = 382 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 134/340 (39%), Gaps = 8/340 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++L+ Y +K F PV+ II P+ A Sbjct: 19 ESAIRIGLIFVLLMFTYDIIKPFILPVIWGAIIAVALMPLTKKLERAYGGRRGLAATTIA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L + PL+ + + + + ++D P G E+WT Sbjct: 79 LLGIALLVTPLVMVSGSIVDGATHALEVLQNGQVKIPGPKPSVADWPVVGDKLYEVWTLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +K+ + G + L I + S + Sbjct: 139 ATNLEQAIQTFMPQIKSALTSLLGTLGGVLGSLLLSILSLAIAAGFMTY-----SESAAS 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L + Sbjct: 194 GLRTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I+ + A ++ V ++ + + AT +W + + + +P L+G + Sbjct: 254 ILMILCIAQLPALLAVLPVIGFMYMTQDTTTATMFTVW-VVVAALSENLFKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P G +GG+ G++GLF+G V++A+ ++ + Sbjct: 313 VPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWL 352 >gi|224824021|ref|ZP_03697129.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] gi|224603440|gb|EEG09615.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] Length = 350 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 4/322 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + L F+ + + + F P++ + + + A I TV V + P+ L Sbjct: 21 YWMLVPFWGALAWGICLAFLLAPVHGWLMRVLKGRAGLSAGIITVLVPVVLAGPVFSLGV 80 Query: 84 YGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +LV+ + + + L P +E + L+ Sbjct: 81 AFANQFADLVTHLQKQPLRIDANLLTQLERYPLVGSLAEWLRQKLTATNEQLQGWLVSSA 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F + L + M+ LFF RDG + + L + P K Sbjct: 141 QMLLQSLASTGGSFVLSALGTIVHFFMMLFLLFFLLRDGRQLLNRAVRLVP-MQPQRRSK 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + ++V R+ G + AI +G ++G + +AG+PS V GV+ AI+A++P GG + Sbjct: 200 LLKLVGNTTRAVVYGTGLTAIAQGALVGIGFAIAGLPSAVVFGVLAAILALLPIGGTALV 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L+ A + +WGA + + D LRP L+ + L F G++GG+ Sbjct: 260 WVPAVGTLVATSQWGWAIFMLIWGAG-VTVSDNLLRPLLISSQEPVSILVVFVGVIGGLS 318 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G++G+ IGPVL+ +IA + + Sbjct: 319 AFGMIGVIIGPVLLTVIAALLR 340 >gi|258542555|ref|YP_003187988.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633633|dbj|BAH99608.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636692|dbj|BAI02661.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639745|dbj|BAI05707.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256642801|dbj|BAI08756.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256645856|dbj|BAI11804.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256648909|dbj|BAI14850.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256651896|dbj|BAI17830.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654953|dbj|BAI20880.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 360 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 141/336 (41%), Gaps = 7/336 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L +++ L+ F ++ A I T WP+ + S + + LF++P Sbjct: 30 LVLGAVWILEPFIPALIWAGTIAVTMWPLLLRLQAWLHGSRKMAISCTLLVALALFVLPF 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + + +P +P L +P G + + W + + Sbjct: 90 WMAVSTVVKHADAFGRIIPYIKSLKLPDLPEKLLHLPLVGEYLGKWWQHLQNMKPMDIVQ 149 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + ++ +A GM+ + + L++I L F + + L L Sbjct: 150 QAVPQPDQIMHYLMSYAGSIGMLAVQFLLTLII----LAAFLAKAEYLITTSEKLVGTLS 205 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +++ + + IR LG+T+ AI E LV G +L GVP L +T + ++ Sbjct: 206 GKRGQEMLELAVRTIRGVALGVTLTAIVESLVGGGGMYLTGVPWASILTAVTFMACLLQA 265 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I+ I++ + A L + +F+ D LRP+L+ +P + G+ Sbjct: 266 GPGITLFPAVIWVYFDKGMVPAIVLLAITFLTIFL-DNMLRPYLIRKQADVPLVLIMMGV 324 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GG+ +GL G+F+GP+++++ + K+ + + +E+ Sbjct: 325 IGGLAALGLAGIFVGPMILSITYTLIKQWMESNQES 360 >gi|301059634|ref|ZP_07200543.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300446280|gb|EFK10136.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 353 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 149/352 (42%), Gaps = 8/352 (2%) Query: 6 LNPQGIMRWMIMFI---ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + R+ ++F+ +L+ + F + ++ A++I + +Y+ + Sbjct: 1 MDEKQGARFFLIFLFCSLLLIVTLFWTFLSAIILAMLIVSIFYSLYAKVNHLFRKREALA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ TV ++ I+P+ + E + + + + +L D P + Sbjct: 61 SLCFTVLILITLIIPMSWFVGTLSNEAYDFY-RTSSSKMSLSKIKVFLRDDPVWAARFKK 119 Query: 123 WTKHLSHP--QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + N F+ S L++ + M + +++ ++D Sbjct: 120 INDMTGLEITPETIENLGSSIGKNIGLFLYNQISSVASNLLNFLIQFFLMALTMYYLFKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + L + + +K++ ++ R+ +G + I +G++ G ++ G+ S Sbjct: 180 GARLKRYFFELLP-VPESQLEKLTDKFHEMGRAIVVGNGLSGIVQGILGGLGFYFFGLSS 238 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G + + MA +P GA F ++ L + GN A ++ +++ ++P Sbjct: 239 PFLWGTVISFMAFLPVIGASAVFIPTTVILFLHGNSGLALGFLIYNLSYSSVIEYLIKPR 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G +++ L F G++GG++ G+LG+ GP+++ + + + + ++ Sbjct: 299 LIGQGMQMNALLVFVGIIGGIKVFGILGIVYGPLIITVFLTLAEIYRLEYRD 350 >gi|301057257|ref|ZP_07198383.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300448622|gb|EFK12261.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 358 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 124/339 (36%), Gaps = 7/339 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ ++ + F + +II +P Y S AV+ T+ ++ L Sbjct: 26 LVLLLLFWCFRIAQPFIQIFVWGIIIAIAVFPAYRWMNSALGGRKKIAAVLLTLLLLVLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 +VP L + ++L + + + P + P G W+ + + Sbjct: 86 VVPCLMFAGSLVETAEKLSASISEGSLRIPKPPETVKSWPAIGQTLHSFWSLSSENLTAA 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LK G+ + A +S I+ + + ++ Sbjct: 146 IKEIAPHLKFVGVWLLNTAAGAGFA-----LVSFFVAILIAGVLLANSEQGVRMARAIAA 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + +RS G+ +A+ + ++ G GVP ++ I+A+ Sbjct: 201 RLAGDRGDEFVNMSGATVRSVARGILGVAMIQSILAGLGCLAVGVPGAGLWALLVLILAV 260 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I I + +Y A +W + + D L+P L+G + +P L F Sbjct: 261 IQLPTFIILAPIVVYAFYTTGTVPAVLFAVWN-LFVGGCDSFLKPLLMGRGVDVPMLVVF 319 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GG G++GLFIG ++++L +++ + + Sbjct: 320 IGAIGGFILNGIIGLFIGAIILSLGFKLFELWLSDSPKQ 358 >gi|150377302|ref|YP_001313897.1| hypothetical protein Smed_5187 [Sinorhizobium medicae WSM419] gi|150031849|gb|ABR63964.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 381 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 135/343 (39%), Gaps = 7/343 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ SL + F ++ A I+ +P Y++ + A++ T+ + + Sbjct: 34 LVGLFAYWSLTLIAPFAIILIWAAILAVALYPAYTALSAVLGHRPRVTALVITMLGLLVI 93 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL + ++ +++++ + P + P G +W+ + +++ Sbjct: 94 VAPLAAIAISFAEGLQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWSMASDNLEAV 153 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G + AS G L + +S++ F + G ++ Sbjct: 154 LQQIKPSLLQAGSKALSTIAS-IGADLLSFVVSVLVAG----FLFGSGARLANSARGFAS 208 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ IR+ G+ +A+ + + L VP+ A+ + I+ + Sbjct: 209 RIGGERGVGFLQLAAATIRNVARGVIGVALLQAFLCVLILSLFKVPAPGAIAFVVLILCI 268 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I G + V ++ A LF I L I+D ++P LV + P L Sbjct: 269 IQIGPALVLLPVIVWAWTSMEFGMA-ALFTILLIPLLIIDNVMKPILVARGLSTPTLVIL 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++GG + GL+GLF+GP+++++ + + E++ Sbjct: 328 LGVLGGTLSYGLIGLFLGPIVLSVFHDLLLIWMSTDTVGAERL 370 >gi|86141183|ref|ZP_01059729.1| hypothetical protein MED217_04177 [Leeuwenhoekiella blandensis MED217] gi|85831742|gb|EAQ50197.1| hypothetical protein MED217_04177 [Leeuwenhoekiella blandensis MED217] Length = 354 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 133/331 (40%), Gaps = 20/331 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + + VL A+ + Y+ + K++ A +A ++ + +VP+ Sbjct: 29 MTPYLSGVLGAITLYVLLRRFYNYLVDKRKWKEGIAAGVAMLASFLVILVPIGLTVMMLT 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ + V + +W L +SE+ Sbjct: 89 NKIGKAVKNSERVVE-------------VVKQQVGVWEADLGF-----KVSESIDTNAIT 130 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 ++ F + ++I M L++ + + Q L + L +I Sbjct: 131 SWVSTNLQNFAGGTFNVFIAIGIMYFILYYMLVNNDKLHQSLYAFIP-LNKENIARIGHE 189 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 +++S LG+ ++A+ +G+V +++ GVP VITAI +MIP G + V Sbjct: 190 SVAMVKSNALGIPLVALAQGIVALIGFFIFGVPDPFFWFVITAIGSMIPFIGTLLGIVPV 249 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I ++ GN A + ++G + + D +R +++ + L T G++ GV G Sbjct: 250 TILMIASGNNLQAVGIAIYGLVVVGSTDNLIRLYVLERLANVHPLVTLIGVIVGVPLFGF 309 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL GP+L++L ++ K + + +I Sbjct: 310 IGLIFGPLLISLFLLVVKIYKHEYGDPEPEI 340 >gi|150377734|ref|YP_001314329.1| hypothetical protein Smed_5665 [Sinorhizobium medicae WSM419] gi|150032281|gb|ABR64396.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 362 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 7/338 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ +I + + L F + A+I+ + ++ + AVI Sbjct: 19 LALLLVSILIAATFWVLLPFVGVLTYAVILATATAGLFDRMVDLLNGRRRLAAVIFGAVA 78 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLS 128 + +VPL+FL ++ + + A+ GIP +P W++ +P G A+ W + Sbjct: 79 ATITVVPLIFLCSSVASQLGVAGAWLSAASTRGIPNLPEWVAGLPLVGSKAAAAWQELQR 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + L G R+ G L L I ++ F+ + Sbjct: 139 EGLELLERYQPQLAAAG-----RWLLNLGTGLLLAVLEIFVGVVLAAIFHASRTWALGFV 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++ K I +G+ A+ EG++ + +AGVP VAL T Sbjct: 194 SAIMVRIVGPKGPELLSAAGKAISGVAIGVIGTALLEGVLAWIGFVIAGVPGAVALAAAT 253 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +A+I G + + V+I+L +G A + WG I L D ++P L+ +LP Sbjct: 254 FFLAVIQIGPLLVWLPVAIWLGAEGQTGWAIFMVAWGIIVLMGTDNIVKPMLIARSGQLP 313 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L F G++GG+ G G+FIG +A++ + + + Sbjct: 314 MLVLFIGVIGGLAAWGFTGMFIGATTLAVLWTVLQAWL 351 >gi|224370368|ref|YP_002604532.1| putative sodium:dicarboxylate symporter permease [Desulfobacterium autotrophicum HRM2] gi|223693085|gb|ACN16368.1| putative sodium:dicarboxylate symporter permease [Desulfobacterium autotrophicum HRM2] Length = 358 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 82/357 (22%), Positives = 142/357 (39%), Gaps = 6/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ M+ I + L + F P+ A + + P++ Sbjct: 1 MTTKDIVQKTVLLTMVFLISALFLNMIHEFLMPMFMASLFSAMASPVHQWLTRHLRGREN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +VI V+ L IVPL L + + + V Q I P + Sbjct: 61 LASVIVIAGVVLLIIVPLSMLVGVVVTQAINVGQSVTPWVQSFINEPTTFTH----YLEK 116 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + I L N F+ S + ++ I M+ +F+F Sbjct: 117 IPYYEQILPYRDVIIQKAGELVGNISSFLINSLSSATKMTMNALFGSIIMLYVMFYFLTM 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ L + + + V R+T G II I +G + G A+ LAG+ Sbjct: 177 GNVLLDRILYFLP-LKDSDERALLLRFTSVTRATIKGTIIIGIVQGFICGLAFALAGIKG 235 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G I A+ ++IP G + + I L++ G L + + +D LRP Sbjct: 236 PVFWGSIMAVTSIIPAVGTALVWGPALIILVLMGKFTGVIILAVLCGVVAGNLDNVLRPR 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LVG K+ L FG +GG+ GLLG+ IGP++ AL IW A K+ ++ Sbjct: 296 LVGKDTKMHDLFVLFGTLGGITMFGLLGIIIGPIIAALFITIWGIYGTAFKDYLPRV 352 >gi|212635770|ref|YP_002312295.1| hypothetical protein swp_2989 [Shewanella piezotolerans WP3] gi|212557254|gb|ACJ29708.1| Membrane protein, putative [Shewanella piezotolerans WP3] Length = 386 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 134/342 (39%), Gaps = 8/342 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++FI++V Y +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALMPLTQKLERALKGRRGLAATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L I P + + + ++ + + ++DIP G + W Sbjct: 79 LGSIILLITPFILVSSSIFDGVSHTIAVLQSGEIRIPGPTQKIADIPLIGDKLFDAWALF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + I +K+ S G + I + F + Sbjct: 139 STNLEKAVIHFLPQIKSAVGTMAGVLGSGVGT-----LVMFIVSLAIAGGFMAHAEKSAA 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + + ++ + + IRS LG+ +A + +++GSA + +P+ Sbjct: 194 AVSTVAVKVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQAILIGSALFTFSIPAAGLFTF 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I+ + + + ++ + AT +W I + D L+P L+G + Sbjct: 254 IVFILGIAQLPPLLVVLPLIFFVFSTHDSTPATIFTVW-VIIAGVSDSFLKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +P G +GG+ T G++GLF+G V++A+ ++ + + Sbjct: 313 VPMPVILIGAIGGMITAGIIGLFLGAVVLAIWYELFITWLKS 354 >gi|159029048|emb|CAO90034.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 358 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 130/329 (39%), Gaps = 7/329 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F +L I+ +P++ + V+ T+ + + I P+ + Sbjct: 27 LLRPFLTMILWGAILAIAWYPLFLWLKKLLAGRAKLATVLLTLLCLGIIIGPVSGIAAVL 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ L + P P ++ P G + LW + + E LK Sbjct: 87 AGNLRTLAEYIDTGAAVIPPPPTDVATWPLIGERIASLWQQASDNTGQFFQRFEPQLKEL 146 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + A+ G+ L + +SI+ +++ ++ L E + P ++ Sbjct: 147 GKISL-SLATSTGLTVLKFIVSILIAAALTL----SAKNLTHLMNRLAEKIAPGRGIALA 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R+ G+ +AI + L++G G P+ L +T I+ ++ G + Sbjct: 202 SLTASTVRNVSRGIIGVAIIQSLLIGIGLVTVGTPAAGLLTFLTLILGILQIGPGLIVLG 261 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I+ + A LW I +VD L+P L+G + +P + G+ GGV G Sbjct: 262 ALIHAWVTLPNSIALLFTLW-MIPATLVDNFLKPILMGRGLPIPMVVILLGVFGGVIAYG 320 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++GLF+GPVL+ L + + I Sbjct: 321 IIGLFVGPVLLGLCYELVRAWIGEDSSEP 349 >gi|300771905|ref|ZP_07081776.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Sphingobacterium spiritivorum ATCC 33861] gi|300761291|gb|EFK58116.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Sphingobacterium spiritivorum ATCC 33861] Length = 354 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 133/333 (39%), Gaps = 18/333 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + L A+ + Y +++ + + ++++ + + + P + Y Sbjct: 31 LSYYLPGFLGAVTLYILFRNAYFKMTEQRKWNKSLVSLLMVLLTVVFIVFPTWGIINYIT 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 EM L+ ++ + +++ +P L N + Sbjct: 91 PEMTNLIGDKNDIIKNFNSIKDYIATVPLLKNVDLSEEALL----------------NIL 134 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + R+ + ++++ + L+F + + P ++ Sbjct: 135 QKLTRYLPSILNSIAEVGVNLLVSLFVLYFMLVHSKRMESTIYH-AIPFSPQSKNELWTE 193 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V ++RS +G+ I+A+ +G V YW GV + + G +TA+ +IP G + + Sbjct: 194 VNMMVRSNAIGIPILALCQGFVAMVGYWFLGVENPILWGGMTAVSTIIPVLGTMTVYVPL 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SI+L G I N L L+G I + +D LR ++ +P L T FG++ G++ G+ Sbjct: 254 SIFLFANGEIGNGIGLLLYGFIVIGGIDNVLRFTILKKLGDVPPLITVFGVLLGLKLFGM 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LG+ GP++++ + V+ K + I Sbjct: 314 LGVIFGPLILSSVGVLLKVYSNEYGRSNSGIPD 346 >gi|15606132|ref|NP_213509.1| hypothetical protein aq_740 [Aquifex aeolicus VF5] gi|8928496|sp|O66948|Y740_AQUAE RecName: Full=UPF0118 membrane protein aq_740 gi|2983326|gb|AAC06916.1| hypothetical protein aq_740 [Aquifex aeolicus VF5] Length = 353 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 134/322 (41%), Gaps = 6/322 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A++ G +P+Y FI +K +S A + V+ ++P ++ Sbjct: 29 NPIVWAIVFGIVLYPLY-GFIKRKLKSENLAAFLVIFIVLVAIVIPFTIFAVITAQQIIV 87 Query: 92 LVSKVVLANQHG--IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI-DF 148 KVV Q + L +IP E L++ QS + N I F Sbjct: 88 FSIKVVNFVQTHSVNDLINSLKEIPFLKEKRESLEPLLNYLQSEEFRRALINALNSILTF 147 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + ++ LFF RDG + +++ + + ++I + + Sbjct: 148 VGDRLRSYVYTAGTSLFHVFVFLLTLFFILRDGEKVLKEIIN-SIPMKREDLEEILKTIY 206 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + + + G A+ + ++ Y LAGV + +IT A +P GA + + I Sbjct: 207 RTVLAVIYGTVGTAVAQSIMGFIGYSLAGVEFALIWALITFFAAFVPPFGAAFVWVPMDI 266 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL I L +G + +D +RP ++ IKLP++ FF +GG+ G +G Sbjct: 267 YLFTTKGIKEGLILLFFGTFLISTMDNIVRPLVMKQGIKLPYVALFFSTIGGLIKFGFIG 326 Query: 328 LFIGPVLMALIAVIWKESIMAI 349 +F+GP++++ + K + Sbjct: 327 VFLGPIILSTMLASVKIYRRRV 348 >gi|227819963|ref|YP_002823934.1| hypothetical protein NGR_b17300 [Sinorhizobium fredii NGR234] gi|227338962|gb|ACP23181.1| hypothetical protein NGR_b17300 [Sinorhizobium fredii NGR234] Length = 365 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 128/345 (37%), Gaps = 13/345 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I I+V F + AL++ P++ A A Sbjct: 25 ELVILVAIAAGIVVCYLLAVPFLPALTWALVLAIMFHPLHRRIAKDLPF-PDIAAAAAVA 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +VPL + + E + A + G + L Sbjct: 84 IAAFVVVVPLTLVAERLVNEAASGAQIIAEALRTGG----------WREAIANYPRIGLV 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L N + F++ + + ++ LF+F RDG L Sbjct: 134 LLWMESQLDLAGLAGNAAALLTNFSASLVRRSVVQIIDVVLTFYFLFYFLRDGREALNVL 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ V + + + G +AI +G + G +WL G+PS + G+ Sbjct: 194 KDYFP-LRSSEMDRLFFRVSETVHAIVFGTFAVAIVQGTLGGLMFWLLGLPSPLLWGLAM 252 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++AM+P GA I + ++ L + G A L WGA + VD L P VG +KL Sbjct: 253 GLLAMVPVLGAFIIWIPAALSLALTGEWGKALILTAWGAGVVATVDNLLYPIFVGDRLKL 312 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + TF ++GGV G GL IGPV + ++ +E+ Sbjct: 313 HTVVTFMSMIGGVIVFGPAGLVIGPVTFTVTLLLLDIWCTHHRES 357 >gi|307309747|ref|ZP_07589398.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306899849|gb|EFN30473.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 381 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 132/333 (39%), Gaps = 7/333 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ S + F ++ A I+ +P Y++ + A++ T+ + + Sbjct: 34 LVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGHRPRVAALVITMLALLVI 93 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL + ++ +++++ + P + P G +W+ + +++ Sbjct: 94 VAPLAAIAISFAEGVQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWSMASGNLEAV 153 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G + + AS G L + +S++ F + G ++ Sbjct: 154 LQQIKPSLLQAGSKALGKIAS-IGADLLSFVVSVLVAG----FLFGSGARLANSAQGFAS 208 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ IR+ G+ +A+ + + L VP+ A+ + I+ + Sbjct: 209 RMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCVLILSLFKVPAPGAIAFVVLILCI 268 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I G + V ++ A LF I L I+D ++P LV + P L Sbjct: 269 IQIGPALVLLPVIVWAWTSMEFGMA-ALFTILLIPLLIIDNVMKPILVARGLSTPTLVIL 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG + GL+GLF+GP+++++ + + Sbjct: 328 LGVLGGTLSYGLIGLFLGPIVLSVFHSLLVIWM 360 >gi|73542584|ref|YP_297104.1| hypothetical protein Reut_A2900 [Ralstonia eutropha JMP134] gi|72119997|gb|AAZ62260.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 379 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 137/345 (39%), Gaps = 7/345 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +++ FF V+ ALI+ T +P+ + S +A + + + + Sbjct: 24 LIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRLRGRLGLSEGHIATLIVLLSIAII 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +VP L ++ + V ++ P G W + + L Sbjct: 84 LVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVASWPLVGQQLYAFWQQAATDLSGL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + LK + + + A G L + ++I I + + G S+ + + Sbjct: 144 LMKVAPQLKGFSVGLLAKLAG-LGTGLLVFVFALIIAGIIMAY----GEMGSRSAERIAS 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P +I + IR+ G+ IA + +++G A+ + +P L + ++ Sbjct: 199 RIVGPDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFIVKDIPGAGLLALAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + V +Y+ AT +F + D L+P L+G + +P Sbjct: 259 IMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G +GG+ + G++GLFIGPV++A+ ++ + E ++ Sbjct: 319 LIGALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVEVVT 363 >gi|86157174|ref|YP_463959.1| hypothetical protein Adeh_0747 [Anaeromyxobacter dehalogenans 2CP-C] gi|85773685|gb|ABC80522.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 381 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 8/327 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + +K F+ A ++ + + A + TV V+ +VP+ L Sbjct: 28 WMVKPFWVAFFLAAVLTAALRRWMEWLSGRLRGRRSLAAGLLTVGVLLAGVVPVAALGAV 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFLKT 143 + E + + + A Q V +S +PG + L PQ Sbjct: 88 LIREAVDGIQWLRSALQSEG-VWGLVSRLPGPIEDLAHRAVTALGDPQRQLQQLAGEQGG 146 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + G + L + M+IALFFF DG + +D+ L ++ + Sbjct: 147 QAAAAVGGVLAATGT----FVLQTVLMLIALFFFLTDGQRLIAWVDARVP-LRAGQFRTL 201 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + S A + + + Y +A P+ + L V+T ++A+IP GA Sbjct: 202 VEDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIFLAVLTLVVALIPAVGATAMV 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 AV+ G+ + L +WGA + +VD RP+L+ G ++L FF L+GG+ Sbjct: 262 LAVAALQFATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMELHGGVVFFALLGGLAA 321 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G +GL +GP+++ + + + Sbjct: 322 FGGIGLILGPLVVTFLVTVLNMYRREL 348 >gi|156977852|ref|YP_001448759.1| hypothetical protein VIBHAR_06643 [Vibrio harveyi ATCC BAA-1116] gi|156529446|gb|ABU74531.1| hypothetical protein VIBHAR_06643 [Vibrio harveyi ATCC BAA-1116] Length = 365 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 131/336 (38%), Gaps = 7/336 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + +K F PV+ II PI A + + L + PL+ Sbjct: 16 MFTYDIIKAFILPVIWGAIIAVALMPICMKLERVYGGKRGLAATTIALLGIALLVAPLVM 75 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + + + + + +++ P G E+WT ++ + Sbjct: 76 VSGSIVDGATHALEVLQNGDIKIPGPKPSVAEWPLVGDKLYEVWTLFATNLEKAIQTFMP 135 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +K+ + G + L I + SI+ L ++ Sbjct: 136 QIKSGLTSLLGMVGGALGSLLLSIISLAIAAGFMTY-----SESIASGLRTVAVRTAGDN 190 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 K + ++ I+S LG+ +A + L++G+ +++ GVP+ L +I I+ + A Sbjct: 191 AKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLTLILMILCIAQLPAL 250 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ V Y+ + + AT +W + + + +P L+G + +P G +GG Sbjct: 251 LAVLPVFGYMYMTNDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGG 309 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G++GLF+G V++A+ ++ + K +++ Sbjct: 310 MLFYGIVGLFLGAVILAIWYELFVWWLSIEKAQQQE 345 >gi|288817681|ref|YP_003432028.1| putative permease [Hydrogenobacter thermophilus TK-6] gi|288787080|dbj|BAI68827.1| putative permease [Hydrogenobacter thermophilus TK-6] gi|308751279|gb|ADO44762.1| protein of unknown function UPF0118 [Hydrogenobacter thermophilus TK-6] Length = 356 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 12/333 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F + L L F P+L A+I ++P++ S + T A++ T+ V+ ++ Sbjct: 16 VFFTFLVLVILTPFLKPILWAVIFSLVAYPLHLSLSRLLRNN-TLSALMVTLLVLTFIVI 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P L + + E+ ++ Q+ + L + ++L T+ + + Sbjct: 75 PFLIIGLVAAKQSVEITKAIIQYLQNHT-LTDVLHSLYSLPVVNKLITEEILQRVYEYMQ 133 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLD 189 SE F K ++ + + G IF + +I+ FF RDG + Sbjct: 134 SEEF-KNTITSYLSKLTQKAGEIFTSMLFATGSVIFKSFVFLISFFFILRDGRRFVEFFA 192 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + ++ + K I + G +A+ + ++ AY + G+ + +IT Sbjct: 193 RFLPMHKEDLY-EVLLTIYKTILAVVYGSIGVALVQAVLSFIAYTVVGINYSLLWALITF 251 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I + +P G + ++IY + +F + LWG++ + VD LRP ++ IK+P Sbjct: 252 IASFVPPFGTGFVWVPIAIYTFLNKGLFYGIFMLLWGSLVISTVDNILRPLIMKKGIKMP 311 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ FF VGG+ T G LGLF+GP++ + + Sbjct: 312 YIVLFFSTVGGLLTFGFLGLFLGPIVFTTLFSL 344 >gi|325111313|ref|YP_004272381.1| hypothetical protein Plabr_4788 [Planctomyces brasiliensis DSM 5305] gi|324971581|gb|ADY62359.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 459 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 143/355 (40%), Gaps = 34/355 (9%) Query: 39 IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 ++ + P+Y+ F+ + + T A +AT +++ I+PL G L++ +++ Sbjct: 74 VVALIAQPVYNYFLKRTKNRPTVAAGMATGTIVAAVIIPLFIGITVGALQLFVAAEQLLD 133 Query: 99 ANQHGIPVPRWLSD------IPGGMWASELWTKHLSH---PQSLKILSETFLKT------ 143 + I G + T + LK E L+ Sbjct: 134 DETVQRTIDTVKQGEIYESVIVWGEQFFPIVTAEYQDRYSEEDLKEWREEVLEQRAENLR 193 Query: 144 ----NGIDFIPRFASRFGMIFLDY---------CLSIIFMIIALFFFYRDGFSISQQLDS 190 NG+ + G F + +I ++AL++F+ +G ++ Q Sbjct: 194 ESVQNGLKRLAVITFSAGTAFTTVDILAKTGWTLMGLITFVMALYYFFCEGPNLLQHAID 253 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + + + IR+ + A+ +G+ A W G ++ Sbjct: 254 LIP-VDVNHQRTLFQEFGTSIRAVVSATFLAALAQGIATSVALWALGFGHFFLFTIVATF 312 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IP G + + ++YL +G+ A L ++G + +D +R +++ KL Sbjct: 313 SALIPLAGTWLVWLPCAVYLAYQGSWIWALLLAVYGFGLVGTLDNIIRAYVLHSDAKLHP 372 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK----ESIMAIKENKEKISSNF 360 L F ++GG++ MGL G+FI PV+ + + + + E + + +E+ +NF Sbjct: 373 LLAFVSVLGGLQVMGLWGVFIAPVVASCLYALIRIFNEELVDISRLQRERPPANF 427 >gi|296120548|ref|YP_003628326.1| hypothetical protein Plim_0276 [Planctomyces limnophilus DSM 3776] gi|296012888|gb|ADG66127.1| protein of unknown function UPF0118 [Planctomyces limnophilus DSM 3776] Length = 423 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 157/348 (45%), Gaps = 10/348 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +++ IL+ + + +L A ++ + P++SS ++ ++ A T V Sbjct: 21 VLSVVMVIFILMFYQVMAPYLMSLLLAGVLAILAQPMHSSSLAYCRGWTSLAAAATTTGV 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVS-------KVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + ++P+LF LE+ V + + + + +++ I M A Sbjct: 81 VVVIVLPILFAILLTGLELSVFVQDNLSDSSWEQIKSTVSLRIDQFVQRIMPLMPAGADQ 140 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L + G +++ + + ++ L+FF DG Sbjct: 141 EAVKEQLLTGIQNQVKQLGVGASEIASSTWGIIGT-LINFFIQLTVCLLGLYFFLADGPR 199 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I +L + P Y +++ KV RS +G + A+G+G+ + A + G+ Sbjct: 200 ILHGAQNLIP-IQPEYQQQVFDQFTKVTRSVVMGTLVAAVGQGIAMSLAVGVLGIGHIFV 258 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G++T + AM+P GA + +SIYL +G+ F A LFL+G + + +D +R + + Sbjct: 259 IGMVTTVAAMVPMIGAAGVYVPMSIYLATQGHYFTAAGLFLFGFLVISSIDNVVRAYTLS 318 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +++ L F ++GG+ GL G+F+GP++ +++ + K +K Sbjct: 319 SNVQMHPLLGFVSILGGLEAFGLWGIFLGPMIASVLYALAKIFNQELK 366 >gi|227540180|ref|ZP_03970229.1| transmembrane protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240041|gb|EEI90056.1| transmembrane protein [Sphingobacterium spiritivorum ATCC 33300] Length = 354 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 132/333 (39%), Gaps = 18/333 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + L A+ + Y +++ + + ++++ + + + P + Y Sbjct: 31 LSYYLPGFLGAVTLYILFRNAYFKMTEQRKWNKSLVSLLMVLLTVVFIVFPTWGIINYIT 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ LV ++ + +++ +P L N + Sbjct: 91 PELTNLVGDKNDIIKNFNSIKDYIATVPLLKNVDLSEEALL----------------NIL 134 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + R+ + ++++ + L+F + + ++ Sbjct: 135 QKLTRYLPSILNSIAEVGVNLLVSLFVLYFMLVHSKRMESTIYH-AIPFSTQSKNELWTE 193 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V ++RS +G+ I+A+ +G V YW GV + + G +TA+ +IP G + + Sbjct: 194 VNMMVRSNAIGIPILALCQGFVAMIGYWFLGVENPILWGGMTAVSTIIPVLGTMTVYVPL 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SI+L G I N L L+G I + +D LR ++ +P L T FG++ G++ G+ Sbjct: 254 SIFLFANGQIGNGIGLLLYGFIVIGGIDNVLRFTILKKLGDVPPLITVFGVLLGLKLFGM 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LG+ GP++++ + V+ K + I Sbjct: 314 LGVIFGPLILSSVGVLLKVYSNEYGRSNSGIPD 346 >gi|124515995|gb|EAY57504.1| conserved hypothetical protein [Leptospirillum rubarum] Length = 361 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 5/343 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + + + + + + +L A I+ F PI++ + K + A++ T Sbjct: 21 IAMALFLCLFGLLYLIIAPYLSALLWAAILSFAVTPIHAFLLRKI-GRPAWTALLTTFLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLS 128 + + PLL L E+ V+ + + VP W++ +P G L T + Sbjct: 80 LGFVLAPLLSLGVPLSHELILAVNGIRTFLEDPHSKVPDWIARLPLVGSRIDALLTGLKT 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 HP L + + I + L ++A F F G +I L Sbjct: 140 HPIGLDVATAKL--QTHILAFGDQVLSLATNLGKWFLKFFIFLLAFFAFTLHGETIWATL 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +++P R G+ A+ + ++ +W AG+P+ + L I Sbjct: 198 SRLFTQWAGNRMEIPLKVIPATTRGVLYGVFFTALFQAILSAIGFWAAGLPNVLLLTTIA 257 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+ P GA + + +YL + + A LW + I++ ++P +G +P Sbjct: 258 FLAALFPIGAVVVWVPSLLYLAVMHHWIAALIFGLWNLLGGGIIEHFIKPMFIGRSSDIP 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 FL G++GG+ GL+GLFIGPV++++ + K + E Sbjct: 318 FLAILLGVMGGLEAFGLIGLFIGPVVLSVTLALLKALASSPSE 360 >gi|27378566|ref|NP_770095.1| hypothetical protein blr3455 [Bradyrhizobium japonicum USDA 110] gi|27351714|dbj|BAC48720.1| blr3455 [Bradyrhizobium japonicum USDA 110] Length = 351 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 146/345 (42%), Gaps = 7/345 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +I +LY ++ F ++ AL++ PI+ + A + T + + Sbjct: 10 LLALLIFWTLYLIRPFVTILVWALVLAVAFNPIFLVLAKILGGRAKLAAGLLTAINLAIV 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I P +L + +++ ++ + P + P G E W + ++ +S+ Sbjct: 70 IGPAAWLGLGAVDGIRDFAGELAAGDLVIPSPPAAIKTWPLIGTPLYEFWDQASTNLRSV 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +LK + A G+ + + LS++ + G + S Sbjct: 130 VQRIAPYLKPFAGTLLG-IAGDAGVGTIKFLLSVVVAGCLFPY----GPQLVAAGRSFLS 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + P + + IR+ G+ IA+ + L+ G + LAG+P L ++ ++++ Sbjct: 185 RIVPEQSEHFLDLAGATIRAVAQGVIGIAVVQALLAGIGFKLAGIPIAGLLALLVLLLSI 244 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G I V I++ ++ A L L+ I + I+D L+P ++G + P L Sbjct: 245 VQIGGAIIMLPVMIWIWTDKDVTVAVLLTLFLGI-VSILDNILKPLVMGRGLTTPALVIL 303 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG G++GLFIGP+++++ + I + + ++ Sbjct: 304 IGVIGGTLGHGIVGLFIGPIVLSVAWELTVAWIRTDRASAASQAT 348 >gi|312131790|ref|YP_003999130.1| hypothetical protein Lbys_3116 [Leadbetterella byssophila DSM 17132] gi|311908336|gb|ADQ18777.1| protein of unknown function UPF0118 [Leadbetterella byssophila DSM 17132] Length = 343 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 141/360 (39%), Gaps = 22/360 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M ++ + I + +++ I+ S L + L+A+ + Y +K Sbjct: 1 MASPQISNRIINQIVLIIAIVFSCLLIFHYLNYYLPGFLAAITLYIVYREWYFRLTEQKR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + A++ + ++PL L Y + + + Q V ++S P Sbjct: 61 WNKVLTALLFIFFSIVFIVLPLWGLIDYMIPRLSVFLDNTDSIMQKFNQVKEYMSKKPVL 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + ++ R + L+++ L+F Sbjct: 121 ENID----------------LSDEALADFLQSLTKYLPRILNSVAEVLLNMLVAFFVLYF 164 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G + QL + +++ + ++R+ +G+ I+ + +GLV Y+L Sbjct: 165 MLVSGRKLENQLTHFFPY-SEVSRQELWSEIKLMVRTNAIGIPILGMCQGLVAMLGYYLF 223 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 GV + V G++T + + P G + + I G NA L L+ + +D Sbjct: 224 GVENAVLWGIVTGVATVFPVLGTMAVYVPICIVSFATGEWTNALWLTLYCFFLVGGIDNV 283 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LR L+ + L T FG++ G++ G+LGL GP+L++ +AV++K + KEK Sbjct: 284 LRFTLLKTLGNVHPLITVFGVLLGLKLFGMLGLIFGPLLLSSVAVLFKVYLNEYGRPKEK 343 >gi|213026539|ref|ZP_03340986.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 307 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 109/296 (36%), Gaps = 7/296 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ V +P WL++IP G W L S Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTIWFVGQAAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHFA 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 193 CRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ G I+L G+ T L +W A + +D +RP L+ LP Sbjct: 253 LVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSA-VVGTLDNVIRPVLIRMGADLP 307 >gi|91223164|ref|ZP_01258430.1| hypothetical protein V12G01_04956 [Vibrio alginolyticus 12G01] gi|91191977|gb|EAS78240.1| hypothetical protein V12G01_04956 [Vibrio alginolyticus 12G01] Length = 382 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 133/340 (39%), Gaps = 8/340 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++L+ Y +K F PV+ II P+ A Sbjct: 19 ESAIRIGLIFVLLMFTYDIIKPFILPVIWGAIIAVALMPLTQKLQRVYGGRRGLAATTIA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L + PL+ + + + + ++D P G E+WT Sbjct: 79 LLGIVLLVTPLVMVSGSIVDGATHALEVLQNGQVKIPGPKPSVADWPIVGDKLYEVWTLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +K + G + L I + S + Sbjct: 139 ATNLEQAIQTFMPQIKAGLTSLLGTLGGVLGSLLLSILSLAIAAGFMTY-----SESAAS 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L + Sbjct: 194 GLRTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ + A ++ V ++ + + AT +W + + + +P L+G + Sbjct: 254 LLMILCIAQLPALLAVLPVIGFMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P G +GG+ G++GLF+G V++A+ ++ + Sbjct: 313 VPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWL 352 >gi|312880432|ref|ZP_07740232.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] gi|310783723|gb|EFQ24121.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] Length = 373 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 126/342 (36%), Gaps = 11/342 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLF 80 + + P+ + + + ++P Y + A + T ++ +PL Sbjct: 31 TCWMALPLLRPLAWSAVFSYFAYPAYRFLHQRVFGGRWANLAAALTTGIILLFLAIPLGT 90 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + E L + +P+ L + Sbjct: 91 VAVSLGREAVRLYGVLSEW----LPLLDREGVDALLSRVHASGASVLGPLFFRVPELKAL 146 Query: 141 LKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L G + + S++ + I+ FF RDG ++ + L L Sbjct: 147 LGETGRWVGAGLTALSRGMVANAFHSFFSLVVITISSFFLVRDGRAMVAFVGDLLP-LPF 205 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 K +S K++++ G+ A + + G +W G+P V G + MIP Sbjct: 206 HEKKALSLRTQKMLQAVVYGIMFTAAIQATLGGLGWWFVGLPHPVFFGGAMFVTGMIPFV 265 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G P+ + I LL+ G+ L LWG + VD LRP + K L F G+ Sbjct: 266 GTPVVWAPGGIVLLMTGHTQEGVLLLLWGGGVVSTVDNFLRPLFISEGSKAHVLLVFVGV 325 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GG+ G LGLF+GP+L++L + + ++E + + SS Sbjct: 326 LGGLAAWGFLGLFLGPMLLSLSLFLLESYRTILREGERRASS 367 >gi|294141912|ref|YP_003557890.1| hypothetical protein SVI_3141 [Shewanella violacea DSS12] gi|293328381|dbj|BAJ03112.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 371 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 142/346 (41%), Gaps = 7/346 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I + + +K F P++ II T +P+ S K S + + T Sbjct: 18 DAVIKIAVIFLVAIWCFEIIKPFIMPIVWGGIIAVTLFPLVSQLSKKSSLSLARASALVT 77 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L ++P + ++ + ++ P ++++P G W + Sbjct: 78 LVSLALLLIPAFLFSGALVSSTQDFIGEIQQGTLVIPPPKESVAELPLIGNKLYSFWDQS 137 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ S+ +K + FGM L + +SII + + S+ Sbjct: 138 STNLASVIKTHSVEIKAVLAKAVSALGG-FGMTVLQFVISIIIAGV----LMTNAKGASE 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L +Y K+++++ +RS G+ +A + ++ G + GVP+ + Sbjct: 193 VCQKIAIRLAGSYGKELTKLSVATVRSVVQGVIGVAFIQSILSGIGMGVVGVPATGIWML 252 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++A++ + + +Y+ + A +WG I + D L+P L+G + Sbjct: 253 VVLLLAIVQLPPILILAPIMVYVFSVESTSVAIMFMVWG-ILVSASDAILKPMLMGRGVD 311 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P L G +GG+ G++GLF+G V+M L ++ I A E Sbjct: 312 IPMLVILLGAIGGMLMSGVVGLFVGAVVMGLGYKLFIAWIDAEPET 357 >gi|145222657|ref|YP_001133335.1| hypothetical protein Mflv_2069 [Mycobacterium gilvum PYR-GCK] gi|145215143|gb|ABP44547.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] Length = 391 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 136/355 (38%), Gaps = 7/355 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +N + + + + + YFL+ + + + ++ + +P+Y ++ + Sbjct: 3 DDFTVNQKRALAVLTVVALGFGAYFLRTYVLLIAVSAVLAYLFFPLYRRLRTRMG--TGG 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWA 119 A + + + +PL + + L++ ++VS + + + L D + A Sbjct: 61 AAATTLFAAIAIVGLPLSGVVFLAFLQISQMVSGIGHWVEQTDLTALGQRLLDSGNELLA 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + P+S++ L N + FA + +I + Sbjct: 121 RVPFVNFTLTPESVRDAIGR-LGQNAGEIALGFARDSVGGIVSTVTGVIIFLYVFLALLT 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + L L + ++ +T G IIA +G+ + ++AG+ Sbjct: 180 NGDKVLDLFRDLNP-LGDKVSDIYLAKIGAMVSATVKGQFIIAACQGVAGAISVYIAGIH 238 Query: 240 SHVALGVI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + VI +++ IP G+ I + I + I GN + ++ I +D LRP Sbjct: 239 NGFFMFVIFLTVLSFIPLGSGIVVIPLGIGMAIFGNPVGGIFVVVFHIIATTNIDNLLRP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FLV L + G++ G +G+ +GPVLM +I + ++ Sbjct: 299 FLVPRSAHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYRVVYRDAP 353 >gi|36958669|gb|AAQ87137.1| Hypothetical protein RNGR00112 [Sinorhizobium fredii NGR234] Length = 355 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 128/345 (37%), Gaps = 13/345 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I I+V F + AL++ P++ A A Sbjct: 15 ELVILVAIAAGIVVCYLLAVPFLPALTWALVLAIMFHPLHRRIAKDLPF-PDIAAAAAVA 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +VPL + + E + A + G + L Sbjct: 74 IAAFVVVVPLTLVAERLVNEAASGAQIIAEALRTGG----------WREAIANYPRIGLV 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L N + F++ + + ++ LF+F RDG L Sbjct: 124 LLWMESQLDLAGLAGNAAALLTNFSASLVRRSVVQIIDVVLTFYFLFYFLRDGREALNVL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ V + + + G +AI +G + G +WL G+PS + G+ Sbjct: 184 KDYFP-LRSSEMDRLFFRVSETVHAIVFGTFAVAIVQGTLGGLMFWLLGLPSPLLWGLAM 242 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++AM+P GA I + ++ L + G A L WGA + VD L P VG +KL Sbjct: 243 GLLAMVPVLGAFIIWIPAALSLALTGEWGKALILTAWGAGVVATVDNLLYPIFVGDRLKL 302 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + TF ++GGV G GL IGPV + ++ +E+ Sbjct: 303 HTVVTFMSMIGGVIVFGPAGLVIGPVTFTVTLLLLDIWCTHHRES 347 >gi|32474562|ref|NP_867556.1| permease [Rhodopirellula baltica SH 1] gi|32445101|emb|CAD75103.1| probable permease [Rhodopirellula baltica SH 1] Length = 664 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 116/256 (45%), Gaps = 4/256 (1%) Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A + V W++ + GG S+L + L ++ F+ R S Sbjct: 397 QPAVKTAAAVRSWMNQLLGGSLRSQLSLIANPDEKDFSSLIRMARESLQPRFV-RLTSAT 455 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G I + ++ ++++++FF DG + + L L + AY ++ + R+ L Sbjct: 456 GSIVVQVIFGLVILVVSVYFFLIDGPVMIRTLMRLSP-MDDAYEHQLLTEFDRTSRAVVL 514 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL-LIKGN 274 A+ +G++ +WL G V L +T++MA++P GA + +++L L+ Sbjct: 515 ASVASAVVQGILATIGFWLCGFDQIVLLLFLTSVMALVPFLGAASVWVPCALWLGLVDQR 574 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 A L ++GA + +D ++ +++ G +L L ++GGV G +G+ +GP++ Sbjct: 575 WIAAAFLAIYGAAVVSSIDNVIKVYVLHGRSQLHPLFALLSVIGGVSVFGPIGILVGPMV 634 Query: 335 MALIAVIWKESIMAIK 350 + + + + +K Sbjct: 635 VVFLQTLLEILNHELK 650 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Query: 15 MIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ I+ V + F + GFF P+ A ++ P++ K A T ++ Sbjct: 109 LVIGILAVGVLFYRLMIGFFVPLFLAALLVVIFRPVHLWIFEKVGRRRRLAAGTTTALIL 168 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + ++PL L + L+SK+ L+N Sbjct: 169 FIVLLPLGVLVSVATTQFTILLSKMNLSN 197 >gi|323138131|ref|ZP_08073204.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322396593|gb|EFX99121.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 351 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 139/334 (41%), Gaps = 18/334 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + V+L F + + AL++ + + + +F A ++ + V + Sbjct: 27 LTLVFVAVTLLLAAPFLSSLTWALVLAVVFLRPHRAIEAVMG--RSFGAALSVLIVALII 84 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL--WTKHLSHPQS 132 + PL F+ + E E + + G +W+ + W + W + Q Sbjct: 85 VGPLAFVSERLINEAVEGAAYIQQEVTQG----KWVDFLKAHPWLETVNNWIEGQFDLQD 140 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + FL G FI + + L+++ LFFF RD + + L L Sbjct: 141 VLSRVGAFLTNAGALFIRQSTGQ--------ALTVLLSFYMLFFFLRDRKAGVEALLRLS 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +K+ + I + G +A +G + G +W PS V +I ++A Sbjct: 193 P-FSDIETRKLIVRIRDTIYAIIYGTLAVAALQGALGGFIFWWLNFPSPVFWALIMGLLA 251 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G + + +I+L I+G +A L LWG + + D +RP L+ ++L P Sbjct: 252 IVPVLGTFVVWVPATIFLAIEGRWADALTLGLWGGVVIASSDNLVRPLLISDTLRLHTAP 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F ++GG++ G GL +GP+ M +++ + Sbjct: 312 AFIAMLGGIQLFGPSGLVLGPIAMTTTSLMLEFW 345 >gi|186471214|ref|YP_001862532.1| hypothetical protein Bphy_6456 [Burkholderia phymatum STM815] gi|184197523|gb|ACC75486.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 367 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 131/339 (38%), Gaps = 7/339 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + F ++ ALI+ T +P+ +A + + + Sbjct: 24 LIAVLAVFCFRIFVPFLNLMVWALILAITLYPLQVRLRRALGGKDGLVATLIILIAFGVI 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 +VP L ++ + V N P ++ P G + W + L Sbjct: 84 LVPTYMLGLAVADSIEHAMGIVKSGNFRIPPPADSVASWPVVGQRVYDFWQAASTDITGL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LK + + G L + +++I I F G + + Sbjct: 144 AQKFAPQLKGAAVVLLETVTG-LGAGLLIFFVALIVAGI----FMAHGEKGYRSAVQIAS 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P +I+ + IR+ G+ IA + L++G + + G+P L + ++ Sbjct: 199 RISGPDNGAQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFVVMGIPGAGLLALAVLLIG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + V +++++ + AT +F + D L+P L+G + +P Sbjct: 259 IMQLPATLITVPVIVFVIVTEGVSTATIIFSVYVFVAGLADNVLKPLLLGRGVAVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G +GG+ T G++GLFIGPV++A+ ++ + + Sbjct: 319 LIGALGGMVTGGVIGLFIGPVMLAVGYELFWRWVRDQPQ 357 >gi|153808104|ref|ZP_01960772.1| hypothetical protein BACCAC_02390 [Bacteroides caccae ATCC 43185] gi|149129007|gb|EDM20223.1| hypothetical protein BACCAC_02390 [Bacteroides caccae ATCC 43185] Length = 341 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 145/352 (41%), Gaps = 31/352 (8%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L AL + + K++ + A++ T + Sbjct: 12 LIVIILFMGVIIFRQITPFLGGLLGALTMYILVRTHMNYLTEKRKMKRSISALLITAETI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+VPL + + + +++++ + V ++ + Sbjct: 72 MVFLVPLGLIIWLVVNKLQDINLAPQTFIEPIQQVAEFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G I + +++ MI L+F G + Sbjct: 113 ---KTGYDVLGKDTLSFIVSILPRIGQIIMEGASSLAVNLFVMIFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + A +++ R + ++RS +G+ ++AI +G V Y + G P+ + LG + Sbjct: 170 VNDILP-FNEANTQEVIREINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNILLLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL I G+ F+A L +GAI + D +R L Sbjct: 229 TCFATIIPMVGTALVWFPVAAYLAISGDWFHAIGLAAYGAIVVSQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 289 THPLITIFGVVIGLPLFGFMGVIFGPLLLSLFFLFVNMFKKEYLDLRNNLPS 340 >gi|242279199|ref|YP_002991328.1| hypothetical protein Desal_1727 [Desulfovibrio salexigens DSM 2638] gi|242122093|gb|ACS79789.1| protein of unknown function UPF0118 [Desulfovibrio salexigens DSM 2638] Length = 365 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 128/330 (38%), Gaps = 8/330 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K F ++ ++++ +P+ + A + ++ I+P + F Sbjct: 34 VIKPFINTIIISVVLSGIFYPLSKKICCRLGGRPALGAFLTVCIIIFAIIIPAVVFFLGL 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET---FLK 142 + + + V+ + + L D + + + + + + Sbjct: 94 IGQGVDSVTAINEWLRTTDF--STLFDSQHYSTYLQWFEQKFPFFEISSSDIQARVLEIS 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + + M +F F +DG ++ L L Sbjct: 152 RSFGQAMLTTGTWLAANMASLVAHFLIMNFLVFSFLKDGERFIDRVRYLSP-LRAEQEDF 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPIS 261 I + KV +S G IA +G+V G +AG+P + G + + ++IP G + Sbjct: 211 IIESLRKVSKSVLFGSLFIAFLQGIVGGIGLAIAGIP-ALFWGTMMSFASLIPVLGTGLI 269 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +IYLLI G + A L +W + + +D LRP +V ++ + F ++GG+ Sbjct: 270 WVPATIYLLIVGKLKIAVFLLIWCGVLVTGIDTVLRPMIVREASRVSTIYVFLAILGGIN 329 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G LG+ GP++++ + V+ + ++ Sbjct: 330 AFGPLGILYGPLILSFLMVMLHIYGVEYQD 359 >gi|269967144|ref|ZP_06181211.1| hypothetical protein VMC_26410 [Vibrio alginolyticus 40B] gi|269828281|gb|EEZ82548.1| hypothetical protein VMC_26410 [Vibrio alginolyticus 40B] Length = 382 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 133/340 (39%), Gaps = 8/340 (2%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F++L+ Y +K F PV+ II P+ A Sbjct: 19 ESAIRIGLIFVLLMFTYDIIKPFILPVIWGAIIAVALMPLTQKLQRVYGGRRGLAATTIA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKH 126 + + L + PL+ + + + + ++D P G E+WT Sbjct: 79 LLGIALLVTPLVMVSGSIVDGATHALEVLQNGQVKIPGPKPSVADWPIVGDKLYEVWTLF 138 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +K + G + L I + S + Sbjct: 139 ATNLEQAIQTFMPQIKAGLTSLLGTLGGVLGSLLLSILSLAIAAGFMTY-----SESAAS 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L + Sbjct: 194 GLRTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ + A ++ V ++ + + AT +W + + + +P L+G + Sbjct: 254 LLMILCIAQLPALLAVLPVIGFMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGVD 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P G +GG+ G++GLF+G V++A+ ++ + Sbjct: 313 VPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWL 352 >gi|218247850|ref|YP_002373221.1| hypothetical protein PCC8801_3084 [Cyanothece sp. PCC 8801] gi|257060829|ref|YP_003138717.1| hypothetical protein Cyan8802_3036 [Cyanothece sp. PCC 8802] gi|218168328|gb|ACK67065.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] gi|256590995|gb|ACV01882.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 363 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 138/334 (41%), Gaps = 7/334 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++I F++ ++ F +L +I+ +P++ ++ I + + + Sbjct: 18 FLIGFLLSWCFALVRPFIEIILWGIILAIAIFPLFLWLKARIGGRGKLAGTIIILLGVSV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 I P+ + + ++ + + + + P P ++ P G + + +W + + Sbjct: 78 IIGPVSVIATVFVNNVETVTNSLASGSLAVPPPPEGVAKWPVIGQYVNRIWQSASVNLIT 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + L+ + A+ G++ L + +SII I + ++++ + Sbjct: 138 VLSQFRPQLEDLATKLVF-LAANMGLLLLKFIVSIIIAGI----LMINAQGLNRRASQVI 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L P + + IRS G+ +AI + L++ +A +P L +++ ++ Sbjct: 193 LRLTPQQGQGFLELATATIRSVTRGIIGVAILQTLLIALGLMVAKIPFAGLLALLSLVLC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +I G I IY A LW + +VD L+P L+ + +P L Sbjct: 253 IIQIGPGIVVLGCIIYAWSTMGTLGALLFTLW-MVPTTLVDNVLKPILMAQGLPVPTLII 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG G+LGLFIGPV+++L + + Sbjct: 312 LIGVLGGTLVHGILGLFIGPVILSLGYQLIVAWV 345 >gi|237715047|ref|ZP_04545528.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409005|ref|ZP_06085550.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645608|ref|ZP_06723301.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|229444880|gb|EEO50671.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353216|gb|EEZ02311.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639053|gb|EFF57378.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|295087834|emb|CBK69357.1| Predicted permease [Bacteroides xylanisolvens XB1A] Length = 341 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 141/352 (40%), Gaps = 31/352 (8%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L AL I + K++ + A++ T + Sbjct: 12 LIVIILFMGIIIFRQITPFLGGLLGALTIYILVRGQMRYLVEKRKLKRSLSALLITAETI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F++PL + + +++++ V ++ + Sbjct: 72 FVFLIPLGLTVWMVVNKLQDINLDPQTYIAPIQQVAEFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G I + +++ MI L+F G + Sbjct: 113 ---KTGYDVLGKDTLTFIVSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG + Sbjct: 170 VNDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVATIGYLLFGAPNILLLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL I G+ FNA + +GAI + D +R L Sbjct: 229 TCFATIIPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L+AL + + + + S Sbjct: 289 THPLITIFGVVIGLPLFGFMGVIFGPLLLALFFLFVDMFKKEYLDLRNNLPS 340 >gi|308050578|ref|YP_003914144.1| hypothetical protein Fbal_2868 [Ferrimonas balearica DSM 9799] gi|307632768|gb|ADN77070.1| protein of unknown function UPF0118 [Ferrimonas balearica DSM 9799] Length = 369 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 134/345 (38%), Gaps = 7/345 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ +++ ++ FF PVL I+ +P++ F + + A + T+ + + Sbjct: 23 LILVLLIWCFQIIRPFFMPVLWGAILAVALYPLHLGFSRRLGDKPKLSATLITLIALAIL 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 ++P F+ + ++ ++ P + + P G A E+W + + + Sbjct: 83 LLPTFFVASAMISGASDVAQQLETEAFEVPPPTQKVQQWPVIGERAYEIWQQASHNLERF 142 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K + F + L F I+ F G + + + + + Sbjct: 143 LTTHAESIKQYLTSVLQTFGGVLSTVAL-----FTFSILISGVFLATGPACGKGIQLMAD 197 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + + +RS G+ +A + + G L GVP ++ I+A+ Sbjct: 198 RLTGHAGSPLPVLAARTVRSVAQGVLGVAFIQAMAAGVGMALMGVPFTGLWTLLILILAI 257 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + V Y+ + A +W I + D L+P L+G + +P L Sbjct: 258 AQLPPILVLAPVIAYVFSVSSGLPAILFTVWS-ILVSASDGLLKPLLLGKGLNIPTLVIL 316 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G++GLF+G V++A+ + + + + + Sbjct: 317 LGAIGGMMMSGIIGLFVGAVVLAVGYTLLEAWLTGEGLQAQSVEK 361 >gi|299146703|ref|ZP_07039771.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|298517194|gb|EFI41075.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] Length = 341 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 142/352 (40%), Gaps = 31/352 (8%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L AL I + + K++ + A++ T + Sbjct: 12 LIVIILFMGVIIFRQITPFLGGLLGALTIYILVRGQMNHLVEKRKLKRSISALLITAETI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F++PL + +++++ V ++ + Sbjct: 72 FVFLIPLGLTVWMVANKLQDINLDPQTYIAPIQQVAEFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G I + +++ MI L+F G + Sbjct: 113 ---KTGYDVLGKDTLSFIMSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG + Sbjct: 170 VNDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL I G+ FNA LF +GAI + D +R L Sbjct: 229 TCFATIIPMVGTALVWFPVATYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 289 THPLITIFGVVIGLPIFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPS 340 >gi|160891098|ref|ZP_02072101.1| hypothetical protein BACUNI_03545 [Bacteroides uniformis ATCC 8492] gi|270294399|ref|ZP_06200601.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317481005|ref|ZP_07940085.1| hypothetical protein HMPREF1007_03204 [Bacteroides sp. 4_1_36] gi|156859319|gb|EDO52750.1| hypothetical protein BACUNI_03545 [Bacteroides uniformis ATCC 8492] gi|270275866|gb|EFA21726.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316902898|gb|EFV24772.1| hypothetical protein HMPREF1007_03204 [Bacteroides sp. 4_1_36] Length = 340 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 133/333 (39%), Gaps = 20/333 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K++ + A + T + F+VPL + + + Sbjct: 27 IAPFMGGLLGALTIYILVRKQMMYLSDKRKMKRSIAATLITAEAILCFLVPLGLVVWLAV 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++ ++ P + A ++ ++ + I Sbjct: 87 VNLQN------------------INLDPQAIIAPFEEAANIIKAKTGYYILGKDTVAYVI 128 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +PR + ++I ++ L+F G + Q ++ L + + Sbjct: 129 SILPRIGQAIMGGISSFAVNIFVLVFVLYFMLIGGKKMEQYVNDLLP-FNDDNTQNVIHE 187 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + ++RS +G+ ++A+ +G V YW+ G P+ + G +T ++IP G + + + Sbjct: 188 INMIVRSNAIGIPLLAVIQGGVAMIGYWIFGAPNILFAGFLTCFASIIPMVGTALVWFPI 247 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y+ + GN A L ++G + +D +R + + L T FG+V G+ G Sbjct: 248 AVYMALIGNWVQAIGLAIYGGAVISQLDNLIRFIIQKKMADIHPLITVFGVVIGLSLFGF 307 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+ GP+L++L + + + K + Sbjct: 308 MGVIFGPLLLSLFFLFVDMFKRGYLDARGKTTE 340 >gi|160886195|ref|ZP_02067198.1| hypothetical protein BACOVA_04202 [Bacteroides ovatus ATCC 8483] gi|237723005|ref|ZP_04553486.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260173678|ref|ZP_05760090.1| hypothetical protein BacD2_17520 [Bacteroides sp. D2] gi|315921940|ref|ZP_07918180.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108080|gb|EDO09825.1| hypothetical protein BACOVA_04202 [Bacteroides ovatus ATCC 8483] gi|229447527|gb|EEO53318.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|313695815|gb|EFS32650.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 341 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 142/352 (40%), Gaps = 31/352 (8%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L AL I + + K++ + A++ T + Sbjct: 12 LIVIILFMGVIIFRQITPFLGGLLGALTIYILVRGQMNHLVEKRKLKRSISALLITAETI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F++PL + +++++ V ++ + Sbjct: 72 FVFLIPLGLTVWMVANKLQDINLDPQTYIAPIQQVAEFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G I + +++ MI L+F G + Sbjct: 113 ---KTGYDVLGKDTLSFIMSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG + Sbjct: 170 VNDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL I G+ FNA LF +GAI + D +R L Sbjct: 229 TCFATIIPMVGTALVWFPVAAYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 289 THPLITIFGVVIGLPIFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPS 340 >gi|237756275|ref|ZP_04584832.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691557|gb|EEP60608.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 355 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 4/316 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F + ++++ +PI+ SK ++S ++I+T ++ ++P + ++ Sbjct: 29 APFIGIITVSILLVVIFYPIHQKI-SKIVKNSVLNSLISTFIILTTLLLPFSLILFFLTK 87 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHLSHPQSLKILSETFLKTNGI 146 E+ EL + + + L + P +L +L+ + S Sbjct: 88 EIIELYPLIADYITNPNLIVEKLKESPYLYKLYLKLQEFYLNKLDNNFHDSIINYLKQFT 147 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + FA F + ++I M I +FF ++DG+ + + S+ L + Sbjct: 148 AIMFNFAKTFLSNIILIFIAIFIMAITIFFLFKDGYKLYNLVYSIIP-LEKEEKDYLFSN 206 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 +++ LG +AI + + + +AGV + L +T A IP GGA + + V Sbjct: 207 SYAAVQAVILGSVFVAIAQAIASLIGFLVAGVEYSLVLTFLTFFAAFIPFGGASLVWVPV 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IYL++ + L+G + VD +RP +VG I + + FF ++GG+ T G Sbjct: 267 AIYLIVSKGLLVGILFTLYGTFVISTVDNIIRPIVVGTKIDMHPMIMFFAIIGGLSTFGF 326 Query: 326 LGLFIGPVLMALIAVI 341 LG+FI PV++ALI Sbjct: 327 LGIFIAPVIVALIDAF 342 >gi|298481866|ref|ZP_07000056.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298272088|gb|EFI13659.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 341 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 141/352 (40%), Gaps = 31/352 (8%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L AL I + K++ + A++ T + Sbjct: 12 LIVIILFMGIIIFRQITPFLGGLLGALTIYILVRGQMRYLVEKRKLKRSLSALLITAETI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F++PL + + +++++ V ++ + Sbjct: 72 FVFLIPLGLTVWMVVNKLQDINLDPQTYIAPIQQVAEFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G I + +++ MI L+F G + Sbjct: 113 ---KTGYDVLGKDTLTFIVSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG + Sbjct: 170 VNDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL I G+ FNA + +GAI + D +R L Sbjct: 229 TCFATIIPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L+AL + + + + S Sbjct: 289 THPLITIFGVVIGLPLFGFMGVIFGPLLLALFFLFVDMFKKEYLDLRNNLPS 340 >gi|327543396|gb|EGF29821.1| permease [Rhodopirellula baltica WH47] Length = 645 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 116/256 (45%), Gaps = 4/256 (1%) Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A + V W++ + GG S+L + L ++ F+ R S Sbjct: 378 QPAVKTAAAVRSWMNQLLGGSLRSQLSLIANPDEKDFSSLIRMARESLQPRFV-RLTSAT 436 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G I + ++ ++++++FF DG + + L L + AY ++ + R+ L Sbjct: 437 GSIVVQVIFGLVILVVSVYFFLIDGPVMIRTLMRLSP-MDDAYEHQLLTEFDRTSRAVVL 495 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL-LIKGN 274 A+ +G++ +WL G V L +T++MA++P GA + +++L L+ Sbjct: 496 ASVASAVVQGILATIGFWLCGFDQIVLLLFLTSVMALVPFLGAASVWVPCALWLGLVDQR 555 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 A L ++GA + +D ++ +++ G +L L ++GGV G +G+ +GP++ Sbjct: 556 WIAAAFLAIYGAAVVSSIDNVIKVYVLHGRSQLHPLFALLSVIGGVSVFGPIGILVGPMV 615 Query: 335 MALIAVIWKESIMAIK 350 + + + + +K Sbjct: 616 VVFLQTLLEILNHELK 631 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Query: 15 MIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ I+ V + F + GFF P+ A ++ PI+ K A T ++ Sbjct: 90 LVIGILAVGVLFYRLMIGFFVPLFLAALLVVIFRPIHLWIFEKVGRRRRLAAGTTTALIL 149 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + ++PL L + L+SK+ L+N Sbjct: 150 FIVLLPLGVLVSVATTQFTILLSKMNLSN 178 >gi|288941027|ref|YP_003443267.1| hypothetical protein Alvin_1296 [Allochromatium vinosum DSM 180] gi|288896399|gb|ADC62235.1| protein of unknown function UPF0118 [Allochromatium vinosum DSM 180] Length = 355 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 133/340 (39%), Gaps = 7/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + +K F P+ +II +P Y + A + V + + Sbjct: 19 ALLLVLAAWCFDIVKPFVIPIAWGIIIAVAQYPGYLRLRAWLGGRRRAAATLMVVIDLLV 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 +VP + L + + L + P + D P G + W + + Sbjct: 79 LLVPAVLLSDTLLDGAQNLAKGLQEGTLAVPRPPESIKDWPLVGEPLNVFWNQASQNLAE 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 LK + + A G L + ++II L + ++ ++ Sbjct: 139 TAAKFAPQLKASAGWLLATVAGA-GFSVLQFIIAIIIAGALL----AHSDASAEFARAVA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L ++++R+ ++RS G+ +A+ + ++ G + + G+P+ ++ +++ Sbjct: 194 TRLAGEKGEELARLAETIVRSVTKGILGVALIQAILAGIGFMVMGIPAAGLWALLCLLLS 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + IY+ + A +W + + +D L+P ++G +++P Sbjct: 254 TVQIGIFPITLPILIYVFATADTVPAVLFLVWS-LIVGSLDNVLKPLVLGRGVQVPMAVI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F G +GG + G++GLF+G V++ L + + + Sbjct: 313 FVGAIGGFISSGIIGLFVGAVVLTLGYKLLLAWVYERPKE 352 >gi|225851276|ref|YP_002731510.1| membrane protein [Persephonella marina EX-H1] gi|225646547|gb|ACO04733.1| membrane protein [Persephonella marina EX-H1] Length = 355 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 66/312 (21%), Positives = 134/312 (42%), Gaps = 5/312 (1%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 +P+ K + S+ ++I+T V IVP + L + ++ L ++ A G Sbjct: 45 FYPVKKKLDHKLK-STLLSSLISTAIVFMFIIVPSIVLIAFFTNQVISLYPVIIQAVSEG 103 Query: 104 IPVPRWLSDIPGGMWASELWTKHLS--HPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + +++ IP +++ + L H + + +N +F+ + Sbjct: 104 HTIEYYINQIPILSSIHKIFLQSLQTLHIEIDLNTVLRNILSNIANFLIEQGKSLFINIT 163 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + I M++ +FF ++DG S+ ++ L L + I+ LG + Sbjct: 164 FLIIGIGIMLVTIFFLFKDGESLYDRVLKLIP-LPEKDKNFLLSKTYTAIQGVVLGSVLT 222 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC 280 AI +G++ Y+ AG+ + IT I A +P GGA + + ++IYL I Sbjct: 223 AIAQGILSFIGYFTAGLEFSLFWAFITFIAAFLPIGGASLVWIPIAIYLFISKGFLTGFL 282 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 LWG + +VD ++P ++G + + FF ++GG+ G +G+F+ P+++ LI Sbjct: 283 FALWGTFVISLVDNIIKPVVIGDKTNIHPVILFFAILGGLNLFGFIGIFLAPIVIVLIDN 342 Query: 341 IWKESIMAIKEN 352 + Sbjct: 343 MLYLYAERFSSQ 354 >gi|310819626|ref|YP_003951984.1| hypothetical protein STAUR_2353 [Stigmatella aurantiaca DW4/3-1] gi|309392698|gb|ADO70157.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 363 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 130/349 (37%), Gaps = 6/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +I+ I + + F A ++ + + + A + Sbjct: 5 LVARRVFTGLILLSIFLLGVIVWPFANGFFLAAVLAGALYGTHKRLTRLLRGRNNLSAGL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG--MWASELW 123 V+ ++PL + + E + V V + ++ +PG L Sbjct: 65 LCFGVIVALLIPLTGFTAFLISEAADGVRFVSETLRTEG-TEGLVNQLPGAVRQPVQNLL 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L + + + G R + + M+IA FFF DG Sbjct: 124 ERFAIEELKLDDKFQQQVSSTGGT-AARAVTGVVAATGSFAFQTTMMLIAFFFFLVDGKR 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++S+ L +I V + + + A + + Y + VP Sbjct: 183 LVEWIESVAP-LKQGQTIEILLEFRHVSIAVLVSSVVTAGVQAVAALVGYLITQVPVPFF 241 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +T +A+IP GA + ++ LLI G+ + A L +WG + + +VD ++P L Sbjct: 242 FAAVTFFLALIPAIGAAVVCFVAALLLLITGHPWAALFLAIWGVVVVGLVDNIVKPLLAK 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + FF L+GG+ + G +GL +GP+++A + + Sbjct: 302 RGMDMHGAIIFFALLGGLASFGTVGLLLGPLIVAFFLALVRIYERDYGR 350 >gi|94310649|ref|YP_583859.1| hypothetical protein Rmet_1709 [Cupriavidus metallidurans CH34] gi|93354501|gb|ABF08590.1| hypothetical protein, putative membrane protein (permease) [Cupriavidus metallidurans CH34] Length = 388 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 140/340 (41%), Gaps = 7/340 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + + K F + + ++I+ T +P+ + K + A + V+C+ Sbjct: 24 LILLLAISCFEIFKPFISLMAWSVILAITLYPLQTYLRGKIFDGEGRTATLIVFLVICII 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +VP L + ++ + N P ++ P G W + SL Sbjct: 84 LVPSCLLGIALIDSVEHALEIARSGNIRIPPPSESVAAWPFVGKQLYGFWHLASTDFASL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K + + A G+ L + +++ I + + G ++ + Sbjct: 144 AEKLAPQIKVVALALLGT-ARGVGVGLLIFVAALMIAGIFMAY----GELGTRSAIQIAS 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P +++ + +R+ G+ IA + L++G A+ + GVP L + ++ Sbjct: 199 RISGPERGPRLTVLCTATVRAVAQGVVGIAFIQMLLIGVAFVMKGVPGAGLLALAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + V I+++ + +F + D L+P L+G + +P Sbjct: 259 IMQLPATLITIPVIIFVIATEGVSGMNIVFAVYVFIAGLADNVLKPMLLGRGVDVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GG+ + G++GLF+GPV++A+ ++ + + ++ Sbjct: 319 LIGALGGMVSGGVIGLFVGPVVLAVGYQLFWQWVEDTQQQ 358 >gi|150400877|ref|YP_001324643.1| hypothetical protein Maeo_0445 [Methanococcus aeolicus Nankai-3] gi|150013580|gb|ABR56031.1| protein of unknown function UPF0118 [Methanococcus aeolicus Nankai-3] Length = 393 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 145/355 (40%), Gaps = 11/355 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + L +Y + + + + + + S P+Y K + I+++ Sbjct: 7 RLLFKLFVSLVSLSLIYTVFPYLDVLALSCALAYMSKPVYDKLKPKFG------SSISSM 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + IVP++ + + + ++ E + + L NQ I +S I + + Sbjct: 61 MCLLFVIVPMVIIGFIILYQILEFLQFLNL-NQLDIQNLNLISLINYKLNYLSNILGYNI 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSISQ 186 + + ++ P ++ + L + + +I + F+F +DG+ I Sbjct: 120 PIKLEEEKLSQYISLILSYLEPHISTAVSGLLLLPEIAIKLIMGVFITFYFLKDGYHIKN 179 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + + + ++ F G + ++ ++ Y++ GV + + L V Sbjct: 180 IVLDNIPTEYQLKTQLYLKYLNESYQNLFTGTALTSVAIVIISFIGYFIFGVQNALLLSV 239 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGP 304 +T I A++P G + +S+Y LI G+ A +F++G + L + D +RP +V Sbjct: 240 LTGIFALLPIVGGWGVYIPLSLYYLIIGDFVTAIGIFIFGWVFLSLAPDFVIRPHIVKKE 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + T+G+ G IGP+L ++K EKI N Sbjct: 300 SDVHPVVVLLAFLVAPLTLGIAGFAIGPILFGAFDALFKVKSKIKYVENEKIKEN 354 >gi|94264995|ref|ZP_01288765.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|94267189|ref|ZP_01290805.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93452098|gb|EAT02778.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93454542|gb|EAT04823.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 381 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 133/329 (40%), Gaps = 7/329 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F + ++ + ++ PIY+ K + + V+ L +PL+F Sbjct: 28 LLWPFLSILVLSFLLTSVFRPIYNLLNRKLP--ELVASFLTCTLVVLLVFIPLVFFVAAL 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E + L +A R + + + + P+ L +T Sbjct: 86 AQEAQGLYEWGRVAGAGLGEKLRTFQESLLFVRLQETAAALGFSLEPEQLGRTLADLART 145 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G+ ++ AS + + + S M I +FF + + + L L +++ Sbjct: 146 AGL-YLYNQASGWAANVVMFVFSFFLMFITIFFLLIEQDRLLNYILRLSP-LPDQQERRL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 ++ + +G I A+ +G+V G + L G+ V G I A++A +P G + Sbjct: 204 FAKFDEITSAVLIGNGICAVIQGVVGGIIFALLGLGPPVLWGAIMAVLAFLPIFGIGLVM 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++Y+ KG++ L + + ++ L+P LVG +++ L F ++GG+ + Sbjct: 264 VPAALYMFFKGSLAGGIALLVLYGVLAVSIEYALKPKLVGQRVRMHTLLVFLSIIGGLSS 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G LG+ GP+++ + + +++ Sbjct: 324 FGFLGIIYGPLIITAFLTLAEIYLVSYDR 352 >gi|119358137|ref|YP_912781.1| hypothetical protein Cpha266_2369 [Chlorobium phaeobacteroides DSM 266] gi|119355486|gb|ABL66357.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides DSM 266] Length = 357 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 160/358 (44%), Gaps = 6/358 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T + + I+ +++FI V + ++ F +L A I P+Y F + + + Sbjct: 2 DTRQSNRTILLVIVLFISAVFIAMIRYFLMALLMAAIFSALLMPLYHRFERWFQGNKSLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + ++++ + ++P L L + + L Q I P S + Sbjct: 62 AGVTILALVLMVLLPSLALIGMVLAQALRLSRLAAPWVQQQIHEPGAFSRTLETLP---Y 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + F T G + S F + ++ + F + +FFF +DG Sbjct: 119 YHELEVYREDILKKIGEFAGTAGNMLLGAI-SSFTLSAVNELFLLFFFLYTMFFFLKDGR 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I ++ S L ++ V R+T G ++ + +G + G A LAG+ S + Sbjct: 178 EILDKMLSYLP-LTEGVKSRLLEKFLSVTRATLKGSVVVGLVQGTLAGLALHLAGIDSAL 236 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G I +++ IP G+P+ + IYLL+ G A + L+ +I + +D LRP L+ Sbjct: 237 FWGAIMTLLSFIPVLGSPLVWVPAVIYLLLIGQYPQALGVLLFCSIIVGQIDNILRPILI 296 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G K+ L F G +GG+ G++G+ +GP++ AL +W+ A + +++ N Sbjct: 297 GRDTKMNELMIFLGTLGGLGLFGIIGIIVGPIVAALFVTVWEIYGEAFSDYLDEVRGN 354 >gi|29346881|ref|NP_810384.1| hypothetical protein BT_1471 [Bacteroides thetaiotaomicron VPI-5482] gi|29338779|gb|AAO76578.1| putative transmembrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 341 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 140/352 (39%), Gaps = 31/352 (8%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L AL I + K + + A++ T + Sbjct: 12 LIVIILFMGIIIFRQITPFLGGLLGALTIYILVRTQMTHLTEKWKLKRSVAALLITAETV 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+VPL + + +++++ V ++ + Sbjct: 72 MVFLVPLGLTIWLLVNQLQDINLDPQTFIAPMQQVAEFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G I + +++ M+ L+F G + Sbjct: 113 ---KTGYDVLGKDTLSFIVSILPRIGQIIMESISSLAINLFVMVFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + A +++ + ++RS +G+ ++AI +G V Y + G P+ + LG + Sbjct: 170 VNDILP-FNEANTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNVLVLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL + G+ FNA L +G I + D +R L Sbjct: 229 TCFATIIPMVGTALIWFPVAAYLAVTGDWFNAIGLAAYGGIVISQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + + Sbjct: 289 THPLITIFGVVIGLPLFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPA 340 >gi|269959791|ref|ZP_06174170.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835545|gb|EEZ89625.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 373 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 125/341 (36%), Gaps = 7/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +I L F V+ II +P+ S ++ S + + + + L + Sbjct: 21 VALLIWWCFSILSPFIMLVVWGGIIAIALYPVMMSLHNRLGISKGKASALLSTVGVLLLL 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +PL+ L E+V+ + L +IP G ++ + Sbjct: 81 IPLIALSSGLYTSGTEVVTGLQDGTLVVPKPQESLKEIPLVGDKLYVAINYASTNMEGFL 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +K F+ + AS G + + + I + F + + L + Sbjct: 141 VNYGEQVK----GFLSQAASIVGSVSGGF-IQFIISTMIAGAFMSNAEVCQKGFTKLADR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + + +RS G+ +A+ + ++ G GVP+ V ++A++ Sbjct: 196 LTNKKGEALIDLSKSTVRSVVQGVIGVALIQSVMAGVGMVAVGVPAAALWMVAVILIAIV 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + IY+ + A +W I + D L+P L+ P L T Sbjct: 256 QLPPILXLIPAIIYVFSVESTLVAGIFLVWC-ILVSASDAVLKPVLLSRGSDTPMLVTLL 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GG+ G++GLF+G V+++L + + K Sbjct: 315 GALGGMAMSGIVGLFVGAVVLSLTYQLMVNWLDEDDTEANK 355 >gi|284165881|ref|YP_003404160.1| hypothetical protein Htur_2610 [Haloterrigena turkmenica DSM 5511] gi|284015536|gb|ADB61487.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 370 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 127/330 (38%), Gaps = 11/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL+A ++ F P + K + A++ T + ++PLL + + Sbjct: 23 IAPLLQYVLAAGLLAFVLRPAHERLEPKLGPRPS--AILLTGVAVVAAVIPLLLISAVVL 80 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ A+ +D+ L + + ++ ++ + Sbjct: 81 GTAVSFLNEFDEASVVESARGVAENDL-------GLEAQQIDAIEAAIHTEIESSLSSAV 133 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + R L+ + + + L++ DG + L + L P ++ Sbjct: 134 ELALGELIRLVNAGLELAIGLAVCVFLLYYLLVDGDDLVAWLGDVAP-LEPHVRDELFGE 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V V + ++A+ +GL+ G + G+P+ VI +++ +P G + + Sbjct: 193 VRVVTWAVIHSHVLVAVVQGLLGGIGLAVVGIPNAAFWTVIMILLSFLPAIGVWLVWGPA 252 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + YL G+ A L +G L +VD LR V L G++GG+ +G+ Sbjct: 253 AGYLATAGDPLAAVALLAYGLTILGLVDNYLRAIFVDRGSGLHPAAVIVGVIGGIYLLGV 312 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GLF+GPVL+A+ E+ + Sbjct: 313 MGLFLGPVLLAVFKAGVNVFTRVSVEDGNQ 342 >gi|218778346|ref|YP_002429664.1| hypothetical protein Dalk_0489 [Desulfatibacillum alkenivorans AK-01] gi|218759730|gb|ACL02196.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 356 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 147/359 (40%), Gaps = 17/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIIL---VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + Q I+ + + I+ + L+ FF+ ++ A ++ PIY + K Sbjct: 1 MEQDRKSHQMILIFFLALYIISIGFMGWLLRPFFSILVLAFVVTGVFTPIYRLLLKKM-- 58 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + V + + +P L + E + V A +P + Sbjct: 59 KPGAASGLTCVIIFLVLFIPTLLFAGIVVSEAVGFLDMVNKA-----ALPDQIRTFINNS 113 Query: 118 WASELWTKHLSHPQSLKILSE-----TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 E +H+ + +E + + F+ L + L+ +FM++ Sbjct: 114 TLLETINQHIDDYGIVISGAEITQAASQIGQFVGGFLLDSGKAVVSNVLSFVLNFLFMVL 173 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +FF DG + L + L +K+ + + LG + + +G++ G+ Sbjct: 174 IIFFILIDGGKLVDYLVDMSP-LPQDQDEKLVAKFKDMSGAVILGNGVCGLAQGILGGAV 232 Query: 233 YWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + L G+PS GV+ I+A +P G + F +I + I+G I ++ +I F Sbjct: 233 FALFGLPSPFLWGVVMGILAFLPIVGIGVVFLPAAIIMFIQGKIATGVFFIIFYSILSFS 292 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 V+ ++P LVG +++ L F ++GG++ G+LG+ GP+++ + + K Sbjct: 293 VEYVIKPKLVGDRVQMHPLLVFLAIMGGLKIFGILGVIYGPLIVTFFLTLADIYRASYK 351 >gi|225848452|ref|YP_002728615.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644073|gb|ACN99123.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 354 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 148/334 (44%), Gaps = 16/334 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + F +L +L+ +P + SK + S ++I+T++++ + Sbjct: 17 FLLFLFLGYVIFSPFVGLILVSLLFVVIFYPFHLKIKSKVK-SDILSSLISTLTILTFIL 75 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL + ++ E+ +L V + L +P L+ +L + Sbjct: 76 IPLSLIVFFLAKEIIDLYPLVSQYISNPNYFVEKLKSVPY------LYNLYLKVQNEIFN 129 Query: 136 LSETFLKTNGIDFIPRFASRFG-------MIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L I+++ FAS F + + + I +I+ +FF ++DG + + + Sbjct: 130 NVNSNLHETFINYLKGFASTFFDIAKGFLTNLILFSIGIFILILNIFFLFKDGEKLYKLV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ L + + +++ LG +A+ + + +AGV + + IT Sbjct: 190 HSVIP-LDKEEKDYLFKNSYLAVQAVILGSVFVAVAQAVATLIGLLVAGVDYAIIIAFIT 248 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP GGA + + V+IYL + FL+G + VD +RP +VG I + Sbjct: 249 FLAAFIPFGGASLVWVPVAIYLFATKSFIAGLLFFLYGTFVISTVDNIVRPIVVGSKIDI 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + FF ++GG++ G LG+FI PV++A+I Sbjct: 309 HPMILFFAILGGLKAFGFLGIFIAPVIVAVIDAF 342 >gi|108801082|ref|YP_641279.1| hypothetical protein Mmcs_4118 [Mycobacterium sp. MCS] gi|119870223|ref|YP_940175.1| hypothetical protein Mkms_4193 [Mycobacterium sp. KMS] gi|108771501|gb|ABG10223.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119696312|gb|ABL93385.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 400 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 128/350 (36%), Gaps = 7/350 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + YFL+GFF ++ A + + P+Y + + A Sbjct: 13 FTTTQKRALSVVTLLAVAFGAYFLRGFFILIVVAAVGAYLFTPLYERLRRRFG--TGLSA 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWASE 121 + ++ + I+P + + ++++ ++V+ V A + + Sbjct: 71 TLTLLAAVLTVIIPATLVVFLAIVQITQMVTTVNQWMATTDVSTLGDRAMKFANDLIEKV 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P +L+ T + G + G + ++IF + + Sbjct: 131 PFLDFRLTPDTLRDGVVTVSQRVGEWLLGVLQGAVGGVLGALAATVIF-LYVFISLLVNR 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PS 240 I + L L +++ T G +IA+ +G+ + ++AG Sbjct: 190 DKIRTLIRRLNP-LGEDITDLYLAKTGAMVKGTVKGQFVIALCQGVAGAISIYVAGFHEG 248 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ + +++IP G+ I I + + GN+ + + + + +D LRP L Sbjct: 249 FFFFAIVLSALSVIPLGSGILSIPFGIGMALFGNVIGGVFVVAFHLLVVTNIDNVLRPML 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 V +L + G+ G G+ +GPVLM +I + K Sbjct: 309 VPKAARLDPALMLLAVFSGIAMFGFWGIVLGPVLMIIIVTTISVYLAVYK 358 >gi|295676312|ref|YP_003604836.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] gi|295436155|gb|ADG15325.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 370 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 130/342 (38%), Gaps = 7/342 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + F + ++I+ T +P+ +A + + + Sbjct: 24 LIAILAVFCFRIFAPFLNLMAWSVILAITLYPLQVRLRHTLGGKDGLIATLIILVAFAVI 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 +VP L +++ ++ + P ++ P G + W + + L Sbjct: 84 LVPTYALGLAVADSIEKSIAIAKSGSFQIPPPAESVASWPIVGQRVYDFWLQASTDLTGL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LK G+ + G + + +++I I G + Sbjct: 144 AHKFAPQLKEAGLAVLATVTG-LGAGLVIFFVALIIAGI----LMAHGEKGYHSAVQIAS 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P +I+ + IR+ G+ IA + L++G + + G+P L + ++ Sbjct: 199 RISGPGNGVQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFVVKGIPGAGLLALAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + V ++++ + A +F + D L+P ++G + +P Sbjct: 259 IMQLPATLITIPVIAFVIVTDGVSTANIIFAVYVFVAGLADNVLKPLMLGRGVAVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ T G++GLF+GPV++A+ ++ + + + Sbjct: 319 LIGALGGMVTGGVIGLFVGPVMLAVGYQLFWRWVRDQPQPTQ 360 >gi|126436920|ref|YP_001072611.1| hypothetical protein Mjls_4349 [Mycobacterium sp. JLS] gi|126236720|gb|ABO00121.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 400 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 128/350 (36%), Gaps = 7/350 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + YFL+GFF ++ A + + P+Y + + A Sbjct: 13 FTTTQKRALSVVTLLAVAFGAYFLRGFFILIVVAAVGAYLFAPLYERLRRRFG--TGLSA 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWASE 121 + ++ M I+P + + ++++ ++V+ V A + + Sbjct: 71 TLTLLAAMLTVIIPATLVVFLAIVQITQMVTTVNQWMATTDVSTLGDRAMTFANDLIEKV 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P +L+ T + G + G + ++IF + + Sbjct: 131 PFLDFRLTPDTLRDGVVTVSQRVGEWLLGVLQGAVGGVLGALAATVIF-LYVFISLLVNR 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PS 240 I + L L +++ T G +IA+ +G+ + ++AG Sbjct: 190 DKIRTLIRRLNP-LGEDITDLYLAKTGAMVKGTVKGQFVIALCQGVAGAISIYVAGFHDG 248 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ + +++IP G+ I I + + GN+ + + + + +D LRP L Sbjct: 249 FFFFAIVLSALSVIPLGSGILSIPFGIGMALFGNVIGGVFVVAFHLLVVTNIDNVLRPML 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 V +L + G+ G G+ +GPVLM +I + K Sbjct: 309 VPKAARLDPALMLLAVFSGIAMFGFWGIVLGPVLMIIIVTTISVYLAVYK 358 >gi|167753079|ref|ZP_02425206.1| hypothetical protein ALIPUT_01349 [Alistipes putredinis DSM 17216] gi|167659393|gb|EDS03523.1| hypothetical protein ALIPUT_01349 [Alistipes putredinis DSM 17216] Length = 361 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 131/329 (39%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + V L F +L AL I + + + + A + + Sbjct: 21 VILLGLGTVIFVELIPFLGGLLGALTIYVLLRGQMRALTIRHKLRRSLAASLLIGEAIVC 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++PL L + + +++++ Q + + E +L ++ Sbjct: 81 FLIPLSLLVWLLVAKLQDVTLDPSTVIQPIRNLAELI---------RERIGYNLLDGDNI 131 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L E +PR + ++++ ++ L+F G + L Sbjct: 132 AKLVE---------LLPRAGQWVLQSIGSFAVNVVVLLFVLYFMLIGGREMESYLRKFIP 182 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +R V ++RS +G+ ++A+ +G V YWL GVP + GV+T + + Sbjct: 183 -FNRTVTQEFTREVVMIVRSNAIGIPLLAVIQGAVALVGYWLCGVPWALFWGVVTCVATI 241 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + ++ YL + G+ A L +G + + VD R L L T Sbjct: 242 VPLLGTALVWLPLAAYLGLIGHWGAAVGLLAYGVVVITQVDNLARFVLQKRMADTHPLVT 301 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG++ G+ G +G+ GPVL+++ Sbjct: 302 IFGVIIGLSLFGFMGVIFGPVLLSIFIFC 330 >gi|220915912|ref|YP_002491216.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219953766|gb|ACL64150.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 380 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + +K F+ A ++ ++ A + T V+ +VP+ L Sbjct: 28 WMVKPFWVAFFLAAVLTAALRRWMEWLSARLRGRRALAAGLLTAGVLLAGVVPVAALGAV 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + + + A Q V +S +PG EL + ++ + + Sbjct: 88 LIREAVDGIQWLRSALQSEG-VWGLVSRLPG--PIEELAHRAVTALGDPERQLQQLAGQG 144 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + L + M+IALFFF DG + +D+ L ++ + Sbjct: 145 GQAAAAVGGVLAATGT--FVLQTVLMLIALFFFLVDGQRLIAWVDARVP-LRAGQFRTLV 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + S A + + + Y +A P+ + L V+T ++A+IP GA Sbjct: 202 EDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIFLAVLTLVVALIPAVGATAMVL 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 AV+ L G+ + L +WGA + +VD RP+L+ G + L FF L+GG+ Sbjct: 262 AVAALQLATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAAF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAI 349 G +GL +GP+++ + + + Sbjct: 322 GGIGLILGPLVVTFLVTVLNMYRREL 347 >gi|188996846|ref|YP_001931097.1| protein of unknown function UPF0118 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931913|gb|ACD66543.1| protein of unknown function UPF0118 [Sulfurihydrogenibium sp. YO3AOP1] Length = 355 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 142/328 (43%), Gaps = 4/328 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + F + ++++ +PI+ SK ++S ++I+T ++ + Sbjct: 17 FLLFLFLGYVIFSPFIGIITVSILLVVIFYPIHQKI-SKIVKNSVLNSLISTFIILTTLL 75 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHLSHPQSLK 134 +P + ++ E+ EL + + + L + P +L +L+ S Sbjct: 76 LPFSLILFFLTKEIIELYPLIADYITNPNLIVEKLKESPYLYKLYLKLQEFYLNKLDSNF 135 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 S + FA F + ++I M I +FF ++DG+ + + S+ Sbjct: 136 HDSIINYLKQFTAVMFNFAKTFLSNVILIFIAIFIMAITIFFLFKDGYKLYNLVYSIIP- 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + +++ LG +AI + + + +A V + L +T A I Sbjct: 195 LEKEEKDYLFSNSYAAVQAVILGSVFVAIAQAIASLIGFLVADVEYSLVLTFLTFFAAFI 254 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P GGA + + V+IYL++ + ++G + VD +RP +VG I + + F Sbjct: 255 PFGGASLVWVPVAIYLMVSKGLLVGILFAVYGTFVISTVDNIIRPIVVGTKIDMHPMIMF 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F ++GG+ T G LG+FI PV++ALI Sbjct: 315 FAIIGGLSTFGFLGIFIAPVIVALIDAF 342 >gi|324497297|gb|ADY39451.1| putative inner membrane protein [bacterium enrichment culture clone P43-9H:P46-4G] Length = 261 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 96/246 (39%), Gaps = 6/246 (2%) Query: 108 RWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 WL+ IP G W L S + + A+ G + L Sbjct: 1 AWLNSIPVVGSKLYSGWHSLLEMGGSALMAKIRPYIGTTTTWFVGQAAHIGRFMMHCTLM 60 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++F + Y G ++ + L + + +R+ LG+ + A+ + Sbjct: 61 LLFSAL----LYWRGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQA 116 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ G ++GVP V+ + + G + I+L G+ T L +W Sbjct: 117 VLGGIGLAISGVPYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYWTGDTTWGTVLLVWSC 176 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + +D +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 177 -VVGTMDNVIRPILIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWV 235 Query: 347 MAIKEN 352 I Sbjct: 236 HEIPPP 241 >gi|224370719|ref|YP_002604883.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223693436|gb|ACN16719.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 386 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 135/335 (40%), Gaps = 8/335 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I++ + L FFA ++ L++ P+ + ++I + + + +VP+L Sbjct: 38 IILVCWLLSPFFATIVMGLVVMGAFAPLNRLLQRRL--KPGLASMITCLVIFFVVLVPVL 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK---HLSHPQSLKIL 136 F E +L A G V + L + + L LS + Sbjct: 96 FFVGVLSKEAYDLYQMAKSAV-LGNQVKQVLENTHVLERVNHLLATMGFDLSFSWEEMVK 154 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L ++ + AS M+I +F+ + DG + + L Sbjct: 155 PVSELGRVVGLYLFQQASFVASNVFKIIFYFCLMLIVVFYLFIDGARFVDYIYDISP-LA 213 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + +K+ ++ + +G + + +G+V G A+++ G+ S GVI +A +P Sbjct: 214 DEHNEKLFCKFKEMAGAVLVGNGLGGLIQGVVGGGAFFMLGLASPFLWGVIMGFLAFLPI 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + + L++K + + + A+ + ++ +P +VG +K+ L FF Sbjct: 274 LGIGVVLIPTGLILMLKERMAAGIFILVLYAVLSWGIEYVFKPKVVGDRVKMHPLVVFFS 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++GG+ G+LG+ GP+++ L + + Sbjct: 334 IIGGLEIYGILGIIYGPLIITLFLTLADIYFANFQ 368 >gi|296169971|ref|ZP_06851578.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895375|gb|EFG75081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 381 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 135/351 (38%), Gaps = 7/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E LN + + + +L + YFL+G+F ++ A + + P+++ F + + Sbjct: 4 EFTLNQKRALAILTAIALLFAAYFLRGYFVLIVVAAVGAYLFTPLFNWFGRRLG--TGLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWAS 120 A + + + IVP+ L ++++ +V + + + + + Sbjct: 62 ATCTLLCALVIVIVPVTLLVILAIVQISRMVDSITEWVKSTDLSGLGDRTLHAVNELLSR 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + +L+ T + G + G + +IIF+ + F Sbjct: 122 VPFAHMTITTDNLRKAMVTVGRNVGEWALHFLQGAVGGLAGAITSAIIFLYV--FVALLV 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++L + L ++R T G +IA+ +G+ ++ ++AG Sbjct: 180 HRERVRKLIADLNPLGDEVTDLYLAKAGAMVRGTVNGQFVIALCQGVAGAASIYVAGFHH 239 Query: 241 HVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ +++IP G I I ++ GNI + LW + + +D LRP Sbjct: 240 GFFIFAVLLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGAFVVLWHLVVVTNIDNFLRPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L + G+ G G+ IGPVLM LI + ++ K Sbjct: 300 LVPRDARLNPALMLLSVFSGIAMFGPWGIVIGPVLMILIVTTVEVYLVVFK 350 >gi|58039782|ref|YP_191746.1| putative permease [Gluconobacter oxydans 621H] gi|58002196|gb|AAW61090.1| Putative permease [Gluconobacter oxydans 621H] Length = 365 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 149/355 (41%), Gaps = 7/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + I++ +++ LK F + A+ I T+WP+ + S + Sbjct: 12 NTRSVLIALLASGIVISAIWILKPFLPATIWAVTIAVTTWPMLRRLQTFVGNSRRVAVSL 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIP-GGMWASELW 123 + M +FI+PL ++++ V ++ IP P W+ +P G + W Sbjct: 72 TILIAMLVFILPLWLAITTVSSHFGDIIALVSSSSTLHIPDEPPWMGRLPLVGPHIAPFW 131 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + I +A F ++ L + L+++ + + S Sbjct: 132 DRMQHMQFPEMVRQVIPAPETLIHTFLAYAGSFSILALQFILTLVILGV----LLMRAES 187 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 D+L L K++ ++ IR G+T+ A+ E V G LAG P Sbjct: 188 AIAVADTLVTILAGNRGKEMLQLAAYTIRGVAFGVTVTAVVESAVAGIGLKLAGAPWVSI 247 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L +T ++ ++ G ++ I++ + A L + I I+D LRPFL+ Sbjct: 248 LTAVTFMVCLLQAGPGVTLIPAVIWVYFDRGLAPAALLLV-VTIITIIIDNVLRPFLIRK 306 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P + G++GG+ +GL+G+FIGP+++++ + K I ++ +S+ Sbjct: 307 QADIPLILIMLGVIGGLGGLGLVGIFIGPLILSVAYTLTKSWISDSRQTPPSVST 361 >gi|33593185|ref|NP_880829.1| hypothetical protein BP2180 [Bordetella pertussis Tohama I] gi|33563560|emb|CAE42458.1| conserved hypothetical protein [Bordetella pertussis Tohama I] Length = 361 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 138/337 (40%), Gaps = 8/337 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I + + + F +L ++I+ T P++ AV+ T++ M + Sbjct: 26 TLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLV 85 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 +VP L + + P ++ ++P G+ E+W + +++ Q Sbjct: 86 LLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQD 145 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T G + AS G+ + SI + L + + ++G Sbjct: 146 VLKPLQPHLATAGRWLLAGMASA-GLGIAVFLASIAIAGVILVY----ADPAKRAAHAIG 200 Query: 193 EHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + P ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ ++ Sbjct: 201 VRIAGPEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLI 260 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ + + +Y+ + A +W + + + D L+P ++ + +P Sbjct: 261 CIVQLPLFLLMVPMVVYVFLNNTPTVAIVFAVWC-LLVSLCDNVLKPLMLARGVDIPIPV 319 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GGV G++GLF+G V L V++ + + Sbjct: 320 ILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQ 356 >gi|218263328|ref|ZP_03477475.1| hypothetical protein PRABACTJOHN_03160 [Parabacteroides johnsonii DSM 18315] gi|218222806|gb|EEC95456.1| hypothetical protein PRABACTJOHN_03160 [Parabacteroides johnsonii DSM 18315] Length = 341 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 137/340 (40%), Gaps = 20/340 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + ++ F +L A I KK +F+A+I + + Sbjct: 19 TIIIVLGMILFVEFIPFLGGILGACTIYILVRKQMLYLTEKKHLRRSFVAIILLLETILC 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++PL + + +++ P + S +L ++ Sbjct: 79 FLIPLSLAVWLLINKLQNFNLD------------------PTQLVKSAEHIANLIEQRTG 120 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +T + + +P+ + +++ +++ L+F G + + + S+ Sbjct: 121 YDVLDTSNIMSAVSILPKIGQVLMGGISGFAINVAVLVLILYFMLIGGAKMEKYVYSILP 180 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + ++ S +G+ ++AI +GL+ YW+ VPS G +T + Sbjct: 181 -FSDENKKNVLNEINMIVTSNAIGIPLLAIIQGLIALLGYWIFDVPSPFLFGFLTCFATI 239 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + +++Y+++ G+ NA L + I + VD +R L L T Sbjct: 240 IPVVGTALVWLPLALYMVLTGDWVNAAGLTAYALIIITNVDNLIRFILQKKMADTHPLIT 299 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 FG++ G+ G +G+ GP+L+++ + + +N Sbjct: 300 IFGVIIGLSLFGFMGIIFGPLLISIFILCFNIFKEKYLDN 339 >gi|154491658|ref|ZP_02031284.1| hypothetical protein PARMER_01269 [Parabacteroides merdae ATCC 43184] gi|154087899|gb|EDN86944.1| hypothetical protein PARMER_01269 [Parabacteroides merdae ATCC 43184] Length = 341 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 135/340 (39%), Gaps = 20/340 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + + F +L A I KK +F+AVI + + Sbjct: 19 TIIVVLGTILFVEFIPFLGGILGACTIYILVRKQMLYLTEKKHLRRSFVAVILLLETILC 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++PL + + +++ P + S +L ++ Sbjct: 79 FLIPLSLAVWLFINKLQNFNLD------------------PTQLVKSAEHIANLIEQRTG 120 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +T + + +P+ + +++ +++ L+F G + + + S+ Sbjct: 121 YDVLDTSNIMSAVSILPKIGQVLMGGISGFAINVAVLVLILYFMLIGGAKMEKYVYSILP 180 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + ++ S +G+ ++AI +GL+ YW+ VPS G +T + Sbjct: 181 -FSDENKKNVLNEINMIVTSNAIGIPLLAIIQGLIALLGYWIFDVPSPFLFGFLTCFATI 239 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + +++Y+ + G+ NA L + I + VD +R L L T Sbjct: 240 IPVVGTALVWLPLALYMTLTGDWVNAAGLTAYALIIITNVDNLIRFILQKKMADTHPLIT 299 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 FG++ G+ G +G+ GP+L+++ + + +N Sbjct: 300 IFGVIIGLSLFGFMGIIFGPLLISIFILCFNIFKEKYLDN 339 >gi|153832787|ref|ZP_01985454.1| hipothetical membrane protein [Vibrio harveyi HY01] gi|148870921|gb|EDL69811.1| hipothetical membrane protein [Vibrio harveyi HY01] Length = 373 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 126/340 (37%), Gaps = 5/340 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +I L F V+ II +P+ + ++ S + + + + L + Sbjct: 21 VALLIWWCFSILSPFIMLVVWGGIIAIALYPVMMTLHNRLGISKGKASALLSTIGVLLLL 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 VPL+ L E+V+ + L +IP +L+ +++ Sbjct: 81 VPLIALSSGLYTSGTEVVTGLQDGTLVVPKPQESLKEIPV--VGDKLFVAINYASTNMEG 138 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + F+ + AS G + + + I + F + + L + L Sbjct: 139 FLVKY-GEQVKGFLSQAASIVGSVSGGF-IQFIISTMIAGAFMSNAEVCQKGFTKLADRL 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + +RS G+ +A+ + ++ G GVP+ V ++A++ Sbjct: 197 TNKKGEALIDLSKSTVRSVVQGVIGVALIQSVMAGVGMVAVGVPAAALWMVAVILIAIVQ 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ IY+ + A +W I + D L+P L+ P L T G Sbjct: 257 LPPILALIPAIIYVFSVESTLVAGIFLVWC-ILVSASDAVLKPVLLSRGSDTPMLVTLLG 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GG+ G++GLF+G V+++L + + K Sbjct: 316 ALGGMAMSGIVGLFVGAVVLSLTYQLMVNWLDEDDAEANK 355 >gi|257458847|ref|ZP_05623970.1| acid membrane antigen A [Campylobacter gracilis RM3268] gi|257443835|gb|EEV18955.1| acid membrane antigen A [Campylobacter gracilis RM3268] Length = 467 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 123/351 (35%), Gaps = 25/351 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + +Y F ++ +++ + +++ T +V+ Sbjct: 122 KTNKIFFIGATLLMFCCVIYLFSPFLMVIVIGVLMAVATSGLHAKVTKLCRGRRTLASVL 181 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWT 124 + + LF VP ++ + N V +PG + + Sbjct: 182 SLFLLCALFFVPFIYAVIEIAKNAASF--DMARLNDALSYVQSLDIRLPGPFEKFNTQFR 239 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L++ + + I + S G + + ++ +I+ FF Y G S Sbjct: 240 SFLANLDVAGVAKQ----------IISYLSVVGKSSAKFIVDMVLIIVFCFFAYLYGESF 289 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + PA I + F A+ +G + + G + + Sbjct: 290 KRFFKKILP-VEPAQIDYIFSETANTMSVVFYSTIFNAVLQGFLFSIIAGIFGFD-ALLM 347 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG 302 GV+ A ++IP G + + ++Y+L G+ A + + I + + D ++P ++ Sbjct: 348 GVLFAFCSLIPAVGGALIYVPTALYVLAGGSTSGAIVIMAYCVILISTLADSFVKPLVIK 407 Query: 303 --------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P + + FF ++ G+ T G G+ +GP ++ L + Sbjct: 408 FINSRLVENPANINEMLIFFSMLSGISTFGFWGVILGPAILTLFIAVLNLY 458 >gi|33602293|ref|NP_889853.1| hypothetical protein BB3318 [Bordetella bronchiseptica RB50] gi|33576732|emb|CAE33810.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 360 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 138/337 (40%), Gaps = 8/337 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I + + + F +L ++I+ T P++ AV+ T++ M + Sbjct: 25 TLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLV 84 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 +VP L + + P ++ ++P G+ E+W + +++ Q Sbjct: 85 LLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQD 144 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T G + AS G+ + SI + L + + ++G Sbjct: 145 VLKPLQPHLATAGRWLLAGMASA-GLGIAVFLASIAIAGVILVY----ADPAKRAAHAIG 199 Query: 193 EHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + P ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ ++ Sbjct: 200 VRIAGPEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLI 259 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ + + +Y+ + A +W + + + D L+P ++ + +P Sbjct: 260 CIVQLPLFLLMVPMVVYVFLNNTPTVAAVFAVWC-LLVSLCDNVLKPLMLARGVDIPIPV 318 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GGV G++GLF+G V L V++ + + Sbjct: 319 ILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQ 355 >gi|224538267|ref|ZP_03678806.1| hypothetical protein BACCELL_03158 [Bacteroides cellulosilyticus DSM 14838] gi|224520127|gb|EEF89232.1| hypothetical protein BACCELL_03158 [Bacteroides cellulosilyticus DSM 14838] Length = 348 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 129/333 (38%), Gaps = 28/333 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K++ + A + T + F+VPL + + Sbjct: 37 ITPFLGGLLGALTIYILVRRQMIHLTDKRKMKRSVAATLITTEAILFFLVPLALAVWLLV 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + L Q I ++I + L + Sbjct: 97 ----SKLQDINLDPQSIIAPIESAANI------------------IKEKTGYDVLGKDTT 134 Query: 147 DFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI G + + +++ ++ L+F G + + + + A + Sbjct: 135 SFIISALPAIGQFVMGSISSFAVNLFVLVFVLYFMLIGGQRMEKYISEILP-FSEANTEH 193 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + + ++ S +G+ ++AI +G V YW VP + G +T + +IP G + Sbjct: 194 VVHDIKMIVHSNAVGIPLLAIIQGGVAMIGYWFFDVPDILLTGFLTCLATVIPMVGTALV 253 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +++Y+ + G++FN L ++G + + +D +R L + L T FG+V G+ Sbjct: 254 WFPIAVYMALSGDLFNGIGLAIFGTLIISQLDNLIRFILQKKMADIHPLITIFGVVIGLS 313 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP+L++L + + K+ Sbjct: 314 LFGFMGVIFGPLLLSLFFLFVDMFKREYLDGKK 346 >gi|224026079|ref|ZP_03644445.1| hypothetical protein BACCOPRO_02832 [Bacteroides coprophilus DSM 18228] gi|224019315|gb|EEF77313.1| hypothetical protein BACCOPRO_02832 [Bacteroides coprophilus DSM 18228] Length = 334 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 129/329 (39%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + L+ L F +L A I K+ AV+ + + Sbjct: 15 AIILVLGLILFLKLTPFMGGLLGACTIYIMLRKQMFYLTHKRHFGKGISAVLLLLETILC 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VPL + + + +++ + + W+ Q+ Sbjct: 75 FLVPLSLVAWLLIHKLQTVNVDTQAFIHTITQLTDWVRT------------------QTS 116 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + ++ +P + ++I +II L+F G + Q + + Sbjct: 117 YDLFDQKNISSVASILPSIGQFLMGGISSFTVNIGVLIIVLYFMLIGGKRMEQYIYEILP 176 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ + ++RS +G+ ++A+ +G++ Y+L PS + G +T + Sbjct: 177 -FNEENKKEVLTEIHLLVRSNAIGIPLLAVIQGMIASLGYYLFDAPSVLLFGFLTCFATI 235 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ Y+ I G+ +A L L+ + + +D +R L L T Sbjct: 236 IPIVGTALVWIPLAAYMAISGDWPHALGLVLYCGLIVTNIDNLIRFILQKKLADTHPLIT 295 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG+ G+ G +G+ GP+L+++ V Sbjct: 296 IFGVFIGLPLFGFMGIIFGPLLLSVFLVC 324 >gi|166369036|ref|YP_001661309.1| hypothetical protein MAE_62950 [Microcystis aeruginosa NIES-843] gi|166091409|dbj|BAG06117.1| hypothetical protein MAE_62950 [Microcystis aeruginosa NIES-843] Length = 358 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 133/335 (39%), Gaps = 7/335 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F +L I+ +P++ + V+ T+ + + I P+ + Sbjct: 27 LLRPFLTMILWGAILAIAWYPLFLWLKKLLAGRAKLATVLLTLLCLGIIIGPVSGIAAVL 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ + + P P ++ P G + LW + + E LK Sbjct: 87 AGNLRTMAEYIDTGAVLIPPPPADVATWPLIGERIAGLWQQASDNTGQFLQRFEPQLKEL 146 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + A+ G+ L + SI+ ++++ ++ L E + P ++ Sbjct: 147 GKISL-SLATSTGLTVLKFIASILIAAALTL----SAKNLTRPMNRLAEKIAPGRGIALA 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R+ G+ +AI + L++G G P+ L ++T I+ ++ G + Sbjct: 202 GLTASTVRNVSRGIIGVAIIQSLLIGIGLVTVGTPAAGLLTLLTLILGILQIGPGLIVLG 261 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I+ + A LW I +VD L+P L+G + +P + G+ GGV G Sbjct: 262 ALIHAWVTLPNSIALLFTLW-MIPATLVDNFLKPILMGRGLPIPMVVILLGVFGGVIAYG 320 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++GLF+GPVL+ L + + I S + Sbjct: 321 IIGLFVGPVLLGLCYELVRAWIGEDSPEPVANSHD 355 >gi|33596416|ref|NP_884059.1| hypothetical protein BPP1789 [Bordetella parapertussis 12822] gi|33566185|emb|CAE37091.1| conserved hypothetical protein [Bordetella parapertussis] Length = 361 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 138/337 (40%), Gaps = 8/337 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I + + + F +L ++I+ T P++ AV+ T++ M + Sbjct: 26 TLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLV 85 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 +VP L + + P ++ ++P G+ E+W + +++ Q Sbjct: 86 LLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQD 145 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T G + AS G+ + SI + L + + ++G Sbjct: 146 VLKPLQPHLATAGRWLLAGMASA-GLGIAVFLASIAIAGVILVY----ADPAKRAAHAIG 200 Query: 193 EHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + P ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ ++ Sbjct: 201 VRIAGPEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLI 260 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ + + +Y+ + A +W + + + D L+P ++ + +P Sbjct: 261 CIVQLPLFLLMVPMVVYVFLNNTPTVAAVFAVWC-LLVSLCDNVLKPLMLARGVDIPIPV 319 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GGV G++GLF+G V L V++ + + Sbjct: 320 ILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQ 356 >gi|257095745|ref|YP_003169386.1| hypothetical protein CAP2UW1_4216 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048269|gb|ACV37457.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 361 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 9/355 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q I ++ +++ + L F +L A++I T+ PI + + S A++ + Sbjct: 6 KQLIQIALVALLLIGCIAVLLPFTGTLLFAIVICVTTLPIRNRLLRLCRGRSNLAALLVS 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIP-GGMWASELWT 124 + ++ L + P+ L ++ + + +HG+P P WL +P G + W Sbjct: 66 ILLLLLLVAPMALLSGSLADGVEIAIRYLKPLMEHGLPATPPAWLISMPIVGTDIASYWH 125 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + L FL + A +F L ++ +I +FF +RD Sbjct: 126 ELIESREEMNNLLRQFLDPT-----RKLALAAVALFAQGLLQLVLVIFFVFFIFRDAHIY 180 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + L +++ +V + G+ A + +V + +AGVP V L Sbjct: 181 VEALHTGSRMLAGDLGERMLALVEGTVTGVMAGIVGTAAAQAVVGMVGFIIAGVPGIVIL 240 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V T +M+P GA + + +++L +G A + LWG + VD L+P L+ Sbjct: 241 TVATFFFSMVPVVGATLIWLGAAVWLYNEGQAGWAVFMVLWGMFGISSVDNFLKPVLISR 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L G+ GGV G +GLF+GP L+AL V+ +E + + E+ +S Sbjct: 301 TASLPLLLIVVGVFGGVLVFGFIGLFLGPTLLALGQVLIREWLAHAGPDVERPAS 355 >gi|167031767|ref|YP_001666998.1| hypothetical protein PputGB1_0752 [Pseudomonas putida GB-1] gi|166858255|gb|ABY96662.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 365 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 138/344 (40%), Gaps = 7/344 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I ++ +++ S + F +L A+I+ T +P++ + + A + Sbjct: 15 LLDVLIKAGLVAALVIFSFQVFQPFLELMLWAVILAVTLYPLHCRIQRRTGLKQGYAATL 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + V+ + +VP+ + + LV+ + P ++ P G LW Sbjct: 75 VVLLVLVVLLVPIYLVVMSIGESVDSLVTLLKSGAWSVPVPPDSVASWPLIGPKVHALWL 134 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ +K G+ + AS G L + +II + + F G Sbjct: 135 AASENMASVLNQWMPQIKGAGLTVLGAAASAGGAFLL-FIGAIIISGVIMAF----GERG 189 Query: 185 SQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + K ++ + IR+ G+ IA + L++G + + GVP Sbjct: 190 EVAAQRIAMRVSGEERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVIKGVPGAGM 249 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++ ++ + A + V IY+ A +F + D L+P L+G Sbjct: 250 LAIVILMLGIAQAPATLVTVPVIIYVFNTDGFTVAAIVFAVYTFVAGLADNVLKPMLLGR 309 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + +P G +GG+ G++GLFIGPV++ + V++ + + Sbjct: 310 GVDVPMPVVLIGALGGMVVKGIIGLFIGPVILGVTYVLFWQWVA 353 >gi|329957164|ref|ZP_08297731.1| hypothetical protein HMPREF9445_02607 [Bacteroides clarus YIT 12056] gi|328523432|gb|EGF50531.1| hypothetical protein HMPREF9445_02607 [Bacteroides clarus YIT 12056] Length = 336 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 125/311 (40%), Gaps = 28/311 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K++ + A I T + F+VPL + + + Sbjct: 27 ITPFLGGLLGALTIYILVRRQMIYLSEKRKMKRSIAATIITAEAILCFLVPLALVVWLAV 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++ + + + + L + + Sbjct: 87 INLQNI----------------------NLDPQAIIAPFEEAAAVIKAKTGYNVLGGDSL 124 Query: 147 DFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI R G + + +++ ++ L+F G + + ++ L A + Sbjct: 125 SFIISSLPRIGQTLMGGISSFAVNMFVLVFVLYFMLMGGKKMERYVNELLP-FNEANTQD 183 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + + ++RS +G+ ++AI +G V YW+ G P+ + G +T +++P G + Sbjct: 184 VVHEINMIVRSNAIGIPLLAIIQGGVAMIGYWIFGAPNILFSGFLTGFASVVPMVGTALI 243 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + ++IY+ + GN F A L ++GA+ + +D +R + + L T FG+V G+ Sbjct: 244 WVPIAIYMALIGNWFQAIGLAIFGALVISQLDNLIRFIIQKKMADIHPLITIFGVVIGLS 303 Query: 322 TMGLLGLFIGP 332 G +G+ GP Sbjct: 304 LFGFMGVIFGP 314 >gi|53712882|ref|YP_098874.1| hypothetical protein BF1591 [Bacteroides fragilis YCH46] gi|52215747|dbj|BAD48340.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 332 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 134/333 (40%), Gaps = 30/333 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I + ++ +F A++ T + F+VP+ + + + Sbjct: 25 ITPFLGGLLGALTIYILVRKQMTYLGARM--KRSFAALLITGEAILCFLVPISLIVWMLV 82 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + L Q I L+ I + L ++ + Sbjct: 83 ----NKLQDINLDPQAIITPVEELAGIIKAKTGYD------------------VLGSDTL 120 Query: 147 DFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI + G + + +++ ++ L+F G + +D + ++ Sbjct: 121 PFIVSLLPKIGQAVMGGISSFAVNLFVLVFVLYFMLIGGTKMEAYIDDILP-FNEKNTRE 179 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 ++ + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP G + Sbjct: 180 VTHEINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLIGVLTCFATIIPMVGTALV 239 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ YL + G NA L +G I + D +R L L T FG+V G+ Sbjct: 240 WFPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLS 299 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP++++L + +NK+ Sbjct: 300 LFGFMGVIFGPLVLSLFLLFVDMFKKEYLDNKK 332 >gi|189468029|ref|ZP_03016814.1| hypothetical protein BACINT_04423 [Bacteroides intestinalis DSM 17393] gi|189436293|gb|EDV05278.1| hypothetical protein BACINT_04423 [Bacteroides intestinalis DSM 17393] Length = 346 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 122/311 (39%), Gaps = 28/311 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K+ + A + T + F+VPL + + Sbjct: 37 ITPFLGGLLGALTIYILVRKQMIHLTDKRNMKRSIAATLITTEAILFFLVPLALAVWLLV 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++++ + ++ I + T + L + Sbjct: 97 SKLQDI----------NLDPESIIAPIEDMANIIKDRTGYD------------VLGKDTT 134 Query: 147 DFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI G + + +++ ++ L+F G + Q + + + Sbjct: 135 SFIISALPAIGQFVMGSISSFAVNLFVLVFVLYFMLIGGQKMEQYISDILP-FNKSNTDH 193 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + R + ++ S +G+ ++AI +G V YW VP + G +T + +IP G + Sbjct: 194 VVREIKMIVHSNAVGIPLLAIIQGGVAMIGYWFFDVPDILLTGFLTCLATVIPMVGTALV 253 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +++Y+ + G++FN L ++G + + +D +R L + L T FG+V G+ Sbjct: 254 WFPIAVYMALSGDLFNGIGLAIFGTLIISQLDNLIRFILQKRMADIHPLITIFGVVIGLS 313 Query: 322 TMGLLGLFIGP 332 G +G+ GP Sbjct: 314 LFGFMGVIFGP 324 >gi|240171099|ref|ZP_04749758.1| hypothetical protein MkanA1_17441 [Mycobacterium kansasii ATCC 12478] Length = 385 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 132/351 (37%), Gaps = 7/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L + + + M +L YFL+ +F ++ A + + P+++ F + S+ Sbjct: 4 EFTLTQKRALAILTMVALLFGAYFLRDYFVLIVVAAVGAYLFTPLFTWFNKRL--STGLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWAS 120 A ++ + +P+ L ++++ +V V P + + + + A Sbjct: 62 ATCTVLTALASVFIPVALLVALAVVQVARMVDNVAEWFNTTDPSELGDKVLRLVNDLLAR 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + P+ L+ + +T G + G S I + + Sbjct: 122 VPFLHVTVTPEMLRNAMISAARTVGTWLLHVLQGAAGS-LAGAVTSAIVFLYVFVALLLN 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L R + ++R T G +IA+ +G+ ++ +LAG Sbjct: 181 RDKLRTLIGQLNP-LGEEVTDLYLRKMGSMVRGTVNGQFVIALCQGVAGAASIYLAGFHH 239 Query: 241 HVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++ +++IP G I I ++ GNI + LW + + +D LRP Sbjct: 240 GFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGVFVVLWHLLVVTNIDNFLRPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L + G+ G G+ IGPVLM LI + K Sbjct: 300 LVPRDARLNSALMLLSVFAGIGMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|190889747|ref|YP_001976289.1| hypothetical protein RHECIAT_CH0000115 [Rhizobium etli CIAT 652] gi|190695026|gb|ACE89111.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 385 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 132/332 (39%), Gaps = 7/332 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I ++ + F V+ + I+ +PI+++ AV+ V + L Sbjct: 32 IIGLFAYWTMVLIAPFALIVIWSAILAVALFPIFAALSGLIGNRPVIAAVVIVVFSLVLI 91 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 I PL + + L+ K+ N P + + P G W + S + Sbjct: 92 IAPLALVAVNFADAAQALIGKLREGNFTLPAAPAAIREWPVVGERIHGAWNQIASDLAAT 151 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + ++ + + AS G L + +SI+ I F S++ + L Sbjct: 152 IIKFQAPIREVTAVIVAKLAS-IGGGVLSFVVSIVLSGI----FLTRSASLAAAIQVLAS 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +R+ +R+ G+ +A + L+ G + L +P+ L I ++ + Sbjct: 207 RIAGEKGVGFARLAGTTVRNVSRGVIGVAFLQALLCGLCFALFDIPAGGPLTFIVFVLCL 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + G + V ++ A + AI + I+D L+P L+ + P Sbjct: 267 MQLGPALVLLPVILWAWFSWPTSIALVFTVV-AIPIMIIDNILKPILMARGLSTPMPVIL 325 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G++GG + GLLGLF+GPV++++ + + Sbjct: 326 IGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 357 >gi|301058702|ref|ZP_07199703.1| putative ATP synthase F0, A subunit [delta proteobacterium NaphS2] gi|300447266|gb|EFK11030.1| putative ATP synthase F0, A subunit [delta proteobacterium NaphS2] Length = 370 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 132/309 (42%), Gaps = 10/309 (3%) Query: 6 LNPQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + R++++ ++L L ++ F + A + P+Y F + Sbjct: 1 MKKETVGRFVLILLVLAISALFLSMIRDFLMALFLAALSSAMVHPLYKRFERRFGGRRGP 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + ++ L ++PL+ L + + ++ V QH + P LS++ + E Sbjct: 61 ASITTLLLMVILVLIPLVGLLGIVVGQAIKVGESVTPWIQHQVAQPGALSELLQKLPFYE 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 H++ + + L F S F M + + + +FFF DG Sbjct: 121 ----HIAPYREVIFQKAGALVGTVSKFFINSLSSFTMGTVSFLFMFFLFLYTMFFFLMDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q++ L +++ + V R+T G +I I +G + G A W+ G+PS Sbjct: 177 DKLLQKILYYLP-LEDQDEQRLLKRFTSVTRATLKGTAVIGIIQGGLAGLALWVVGIPSA 235 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V G I A++++IPG G + + V I L+ G+ L L+ + + +D LRP L Sbjct: 236 VFWGAIMAVLSVIPGIGTGLVWGPVGIVLIAGGHYGKGIGLILFCGVVVGSIDNFLRPRL 295 Query: 301 VGGPIKLPF 309 VG ++ Sbjct: 296 VGRDTQMHD 304 >gi|325280258|ref|YP_004252800.1| hypothetical protein Odosp_1595 [Odoribacter splanchnicus DSM 20712] gi|324312067|gb|ADY32620.1| protein of unknown function UPF0118 [Odoribacter splanchnicus DSM 20712] Length = 349 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 136/342 (39%), Gaps = 20/342 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + +V + F +L A I I KK + +A + + + + Sbjct: 14 TIILVMGVVIFFKATPFLGGLLGAATIYILLRNQMLYLIEKKHMKKSLMATLMLIETILI 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + L+SK+ N + + + L ++ Sbjct: 74 FLIPISLVVWL-------LISKLQAINLDPKSLMEPIGHV-----------SKLVQEKTG 115 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + +P+ ++ ++++ +I+ L+F G + + + Sbjct: 116 YDVLSKGNIGALLSVLPKVGQILMGSISNFIINVLVLILVLYFMLVGGRKMEDYIIDILP 175 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + V++S +G+ ++AI +G + Y++ G P + GV++ + Sbjct: 176 -FNQRNKRDVLHEFHMVVKSNAIGVPLLAIIQGGIAMLGYYIFGAPEVILWGVVSCFATV 234 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G I + +++Y+ G+ + A L ++ + + VD +R L L T Sbjct: 235 IPVIGVAIVWIPLALYIGATGHWWTALGLSVYCIVIVANVDNLIRSVLQRKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FG+V G+ G +G+ GP+L+++ + + E + Sbjct: 295 IFGVVIGLSLFGFMGIIFGPLLLSIFVLCVQIFKAEYLEEPQ 336 >gi|303243971|ref|ZP_07330310.1| protein of unknown function UPF0118 [Methanothermococcus okinawensis IH1] gi|302485623|gb|EFL48548.1| protein of unknown function UPF0118 [Methanothermococcus okinawensis IH1] Length = 343 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 140/348 (40%), Gaps = 17/348 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M+ ++ + L +Y F + + + PIY +A + Sbjct: 7 RLLMKIFVLGVFLAIVYMTYPFLDTLALSCAFAYMGKPIYDKLKPHTGN------TLAAI 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIP--GGMWASELWT 124 + FI+P + + Y + E+ + ++ N + L+++ W Sbjct: 61 ICLLAFIIPTVIVGYIVLKELLIFLQQINIQSLNLQSMDTVERLNNLLYKVSSIFGYSWQ 120 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++L+ + + + MI + + + ++ ++F +DG + Sbjct: 121 VDEQTLSNYISQILSYLEPYIKNSLAQL-----MILPEIAIKTMIVLFMTYYFLKDGHVV 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + + + + ++ F+G + +I G++ G Y++ G+P+ L Sbjct: 176 KKAILAQVPDKYYEKTELFLNNLNESYKNLFIGNALTSIAIGVISGIGYYIIGIPNAFIL 235 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG 302 VIT + A++P G + +SIY L+ G I L L+G I L + D +RP +V Sbjct: 236 AVITGVFALLPIIGGWTVYIPLSIYYLMTGEIVKGIELLLFGWIFLSTLPDFVIRPLIVK 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + G T+GL G +GP+++ +W+ + K Sbjct: 296 KESDVHPSLILIAFLIGPLTLGLGGFAMGPLIVGAFDALWRVKLRESK 343 >gi|284165585|ref|YP_003403864.1| hypothetical protein Htur_2311 [Haloterrigena turkmenica DSM 5511] gi|284015240|gb|ADB61191.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 393 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 139/341 (40%), Gaps = 17/341 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + I++ L + + VL +++ + P+ + A ++ + Sbjct: 14 QPALTALALIAIVLGLLIVLPYLQYVLFGVVLAYILLPLQKRLEERV--RPMIAAFVSVI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++PLL++ + LV + + L+D + + L+ + Sbjct: 72 VALLVIVIPLLYILSVAFQQSTLLVEAIREGEIDLQMIEGALADRGYPVDLTGLYESYQD 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + G+ + A + + + F RDG + L Sbjct: 132 A------------ISTGLRGLANNALDIVGGLPGILIGLTITLFVCFALLRDGDRLIDWL 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ + +++++ + ++A + ++LG + G+P+ V L V+T Sbjct: 180 YRVVP-IDDEIQRELFTELDHLMQASVISNVLVAAIQAVMLGVGLAVLGIPAVVLLTVLT 238 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++P GA + VSIYL+ G A L ++G + + + D LRP L+G + Sbjct: 239 FVLTLLPLVGAFGVWLPVSIYLVAIGRPVAAAALAVYG-LFVTVSDTYLRPALIGRTSAI 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G+ GG+ T G +GLF+GPV++ V+ Sbjct: 298 NSAIIVVGIFGGLITFGAVGLFVGPVVLGGAKVVLDIFARE 338 >gi|255535413|ref|YP_003095784.1| hypothetical protein FIC_01274 [Flavobacteriaceae bacterium 3519-10] gi|255341609|gb|ACU07722.1| hypothetical protein FIC_01274 [Flavobacteriaceae bacterium 3519-10] Length = 354 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 146/345 (42%), Gaps = 16/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ++ Q + + +F++ + L+ L F + VL A+ + + Y +K+ +S + Sbjct: 7 QISVQKALIFTALFLVALILFELNYFMSGVLGAVTLYVLTRNFYLRLTEEKKWNSNLVIT 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V+ F VPL + + ++ E+VS + V ++ Sbjct: 67 LIIFLVIITFAVPLWIILEILIPKINEIVSDREAIVEKYNAV--------------RVFL 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + + ++ + + +I + L+F + + Sbjct: 113 ENNQYTKRFDLQLSNERIMQAVNKVISYIPSTLNWVGQMLGNIFVALFILYFMLKQSRIM 172 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q+ L + K + +IRS G+ I+ + +G++ Y++ GV + + Sbjct: 173 EQKFKELLP-VSRESKKYFIQHNAALIRSNAYGIPILGLSQGIIAIIGYYIFGVENAIFW 231 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++T +++P G I + + IY + G++ N L + + + +D LR L+ Sbjct: 232 GLLTGAASIVPVVGTMIVYLPICIYQVATGDVNNGLFLAGFCLLFVGGIDNVLRLTLLKK 291 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L T FG++ G++ G++GL GPVL+++ ++++ M Sbjct: 292 MADIHPLVTVFGVLLGLQMFGVMGLVFGPVLLSMPGILYRIFEME 336 >gi|60681100|ref|YP_211244.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|253563134|ref|ZP_04840591.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265762981|ref|ZP_06091549.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60492534|emb|CAH07305.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|251946910|gb|EES87192.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263255589|gb|EEZ26935.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301162588|emb|CBW22135.1| putative transmembrane protein [Bacteroides fragilis 638R] Length = 332 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 133/333 (39%), Gaps = 30/333 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I ++ +F A++ T + F+VP+ + + + Sbjct: 25 ITPFLGGLLGALTIYILVRKQMIYLGARM--KRSFAALLITGEAILCFLVPISLIVWMLV 82 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + L Q I L+ I + L ++ + Sbjct: 83 ----NKLQDINLDPQAIITPVEELAGIIKAKTGYD------------------VLGSDTL 120 Query: 147 DFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI + G + + +++ ++ L+F G + +D + ++ Sbjct: 121 SFIVSLLPKIGQAVMGGISSFAVNLFVLVFVLYFMLIGGTKMEAYIDDILP-FNEKNTRE 179 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 ++ + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP G + Sbjct: 180 VTHEINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLIGVLTCFATIIPMVGTALV 239 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ YL + G NA L +G I + D +R L L T FG+V G+ Sbjct: 240 WFPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLS 299 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP++++L + +NK+ Sbjct: 300 LFGFMGVIFGPLVLSLFLLFVDMFKKEYLDNKK 332 >gi|118468766|ref|YP_889482.1| hypothetical protein MSMEG_5237 [Mycobacterium smegmatis str. MC2 155] gi|118170053|gb|ABK70949.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 395 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 133/352 (37%), Gaps = 7/352 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + + + +L+ YFL+ FF ++ A + + P+Y + + +S Sbjct: 3 NQFTTTQKRALAVVTVLALLLGAYFLRTFFVLIVMAAVGAYLFSPLYQRLLRRF--NSGI 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWA 119 + ++ + + I+P+ + + ++++ ++V+ V A+ + Sbjct: 61 AVTLTVLAALLMVIIPVSLIVFLAIVQVSQMVNTVSAWVADTDLSTLGDRTLQFINSTAD 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + P+SL+ T + G + G + SIIF + Sbjct: 121 RVPFLDIDVTPESLRDAIVTVSQRVGEWLLGVLQGALGGLAGALTASIIF-LYVFISLLV 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + ++ + L L +++ T G +IA+ +G+ + ++AG Sbjct: 180 NSEKVTTLVRQLNP-LGEEITDLYLAKTAAMVKGTVKGQFVIALAQGISGAISIYIAGFH 238 Query: 240 SHVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + ++ +++IP G I I ++ GN + + + + +D LRP Sbjct: 239 NGFFVFAILLTALSVIPLGGGIVTIPFGIGMMFFGNTIGGIFIVAFHILVVTNIDNVLRP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L + G+ G GL IGPVLM +I + K Sbjct: 299 ILVPKAARLDAALMLLAVFAGIAMFGFFGLVIGPVLMIIIVTTISVYLAVYK 350 >gi|183984335|ref|YP_001852626.1| hypothetical protein MMAR_4364 [Mycobacterium marinum M] gi|183177661|gb|ACC42771.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length = 385 Score = 149 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 136/351 (38%), Gaps = 7/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L+ + + + + +L YFL+ +F ++ A + + P+++ F + ++ Sbjct: 4 EFTLSQKRALAIVTLAALLFGAYFLRSYFVLIVVAAVGAYLFTPLFNWFNKRL--NAGLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWAS 120 A + ++ + + IVP+ L ++++ +V + + + + + A Sbjct: 62 ATLTLLTALVVVIVPVGLLVGLAVVQIARMVENIAGWVKTTDLSSLGDKALQLVNELLAR 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++L+ + + + G ++ F S I + + Sbjct: 122 VPFLHVTVTAEALRKMMISVAQNVG-QWLLHFLQNAAGSLAGAVTSGIIFLYVFMALLLN 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L R + ++R T +G +IA+ +G+ ++ ++AG Sbjct: 181 REKLRTLIGQLNP-LGEEVTDLYLRKMGSMVRGTVIGQFVIALCQGVAGAASIYVAGFHH 239 Query: 241 HVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++ M++IP G I I + GNI + LW + + +D LRP Sbjct: 240 GFFIFAILLTAMSIIPLGGGIVTIPFGIGMAFYGNIGGGAFVVLWHLLVVTNIDNFLRPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L + G+ G G+ IGPVLM LI + K Sbjct: 300 LVPRDARLNSALMLMSVFAGIGMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|209515626|ref|ZP_03264490.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503862|gb|EEA03854.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 370 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 131/336 (38%), Gaps = 7/336 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + F + ++I+ T +P+ +A + + + Sbjct: 24 LIAILAVFCFRIFAPFLNLMAWSVILAITLYPLQVLLRPMFGGKDGLIATLIVLVAFAVI 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 +VP L +++ ++ H P +S P G W + + L Sbjct: 84 LVPTYVLGLAVGDSIEKSIATFKGGGLHIPPPAESVSSWPVIGPRVYGFWQQASTDLTGL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LK G+ G + + +++I I + + G + + Sbjct: 144 AQRFAPQLKEAGLALFAMLTG-LGAGLVIFFVALIIAGILMAY----GEKGYRSAVQIAS 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P +I+ + IR+ G+ IA + L++G + + G+P L + ++ Sbjct: 199 RISGPEEGTQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFIVMGIPGAGLLALAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + V I++++ + AT +F + D L+P L+G + +P Sbjct: 259 IMQLPATLITIPVIIFVILTDGVSTATIIFSVYIFVAGLADNVLKPLLLGRGVAVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ T G++GLF+GPV++A+ ++ + Sbjct: 319 LVGALGGMVTGGVIGLFVGPVVLAVGYQLFWRWVRD 354 >gi|167572529|ref|ZP_02365403.1| hypothetical protein BoklC_22016 [Burkholderia oklahomensis C6786] Length = 231 Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 4/232 (1%) Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G AS W +L+ P + E +K + F FG + FM++ L Sbjct: 3 GSQQASGWWHAYLAKP----LHPEAAVKGVDDGAVVTFGRHFGSRIAHAAVLFGFMLVTL 58 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F ++ G +S L + F + + + + T G+ ++ GEG++LG AY Sbjct: 59 FVIFQAGPRLSGALLTGVRRAFGDNGAALLQRMAAAVYGTVTGLVVVGFGEGVLLGVAYA 118 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 AG+P LG++TA+ AM+P AP+ F +++L ++G + A L +G + +F+ + Sbjct: 119 FAGLPHAALLGLVTAVAAMLPFCAPLVFCGAALWLFVQGAVGWAIGLAAFGFVVVFVAEH 178 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ V+W E + Sbjct: 179 FVRPVLIGNSARLPFLLVLFGILGGAETFGLLGLFIGPALMTVLTVLWVEWV 230 >gi|255536614|ref|YP_003096985.1| hypothetical protein FIC_02490 [Flavobacteriaceae bacterium 3519-10] gi|255342810|gb|ACU08923.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 367 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 146/350 (41%), Gaps = 20/350 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + +I+ + + Y L F VL A+ + S +KE + + Sbjct: 21 KQIFLLAVILLLAGIICYHLALFIPAVLGAITLYIISRKYNIYLQEEKEWKPWAASTVII 80 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + + I+P+ F+ + ++ + + N + ++ Sbjct: 81 VATLIILILPIYFIGDLLIEKLGNASAYMQKFNVFVDKIHDYV----------------- 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ + D + ++++ + + M L+F + ++ Sbjct: 124 -YSKTKIDVLSKDNLNKLKDSVGKYSTLALSSTFNTLTVVASMYFILYFMLEK-PRLFER 181 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + + K++ + +G+ ++AIG+G+V Y++ PS + L + Sbjct: 182 LVKSSAPLKKSNINLLGDKIRKMVIANAIGIPVVAIGQGIVAVIGYFIFDAPSAILLFAL 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA+ +MIP GA I + V I+++ +GN L + + + + D LR L+ Sbjct: 242 TAVASMIPIVGAAIVYVPVCIFMIAEGNTGQGLGLAAYCMVAVGLTDNLLRFTLLKRLEN 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L T FG++ G++ G +GL GP+L+++ ++ + E++ ++ Sbjct: 302 IHPLNTVFGIIVGMKIFGFMGLIFGPILVSITVLLIQVYRDEFSEDENEL 351 >gi|291513866|emb|CBK63076.1| Predicted permease [Alistipes shahii WAL 8301] Length = 350 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 131/329 (39%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I + L L F +L A+ I ++ + A + + Sbjct: 15 VLIAGLGLTIFAELTPFLGGLLGAVTIYVLLRRQMWFLSERRRWRRSLAASLLLGEAIFF 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VP+ + + + + + V L Q I R ++ + +LW++ Sbjct: 75 FLVPISLIVWMVVDK----IQGVALDPQSVITPVRHVAGLIQQKTGYDLWSESNLQ---- 126 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + ++PR +++ ++++ ++ L+F G + + Sbjct: 127 ----------SVLGYLPRAGQWLVGGIVNFAVNLVVLLFVLYFMLIGGLRMETYCREILP 176 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + R + ++RS + + ++A+ +G+V Y GVP + GV+T + Sbjct: 177 -FDRRAARSVMREIHMIVRSNAIVIPLLAVSQGVVAYVGYLAFGVPEPLFWGVLTCFATI 235 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + ++ Y+ + GN L ++G + + VD +R + + L T Sbjct: 236 LPIVGTALVWLPLAAYMSLDGNWGQGVGLVMYGTLVVTQVDNLVRMVMQKKMADVHPLIT 295 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG+ G+ G +G+ GP+++A+ Sbjct: 296 IFGVFIGLSLFGFMGVIFGPLMLAMFVFC 324 >gi|292491658|ref|YP_003527097.1| hypothetical protein Nhal_1573 [Nitrosococcus halophilus Nc4] gi|291580253|gb|ADE14710.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 358 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 7/311 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ I+ + ++ + +L A+I +P+Y+ + +VI V Sbjct: 13 KAFILVLLTAILAAFIAIIREYLIALLLAIIFTALLYPVYNQVLRILHGRRALSSVIVLV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHL 127 + + +PLL L E ++ V + +P LS DIP SE + Sbjct: 73 LAIFVIGLPLLGLLGAVAAEAVQISESVEPWLEKKLPDQHDLSRDIPEWFPFSEQLEPY- 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +S I L N +F+ + S +++ + M+ A+FFF G Sbjct: 132 ---KSRIIAKGGELAGNAGEFLAKSISAVTQGTINFIVKFFIMLYAMFFFLMWGPDSLTV 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + ++ + +I + +G+++G A+W+AG+ + G I Sbjct: 189 LMRYIP-LTEKDRSLLLEKGLAITKAILKSILVIGVLQGILVGLAFWVAGLKGAIFWGAI 247 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +++ IPG GAP+ + IYL + G A + LWG+I + VD LRP +VG K Sbjct: 248 VVVLSAIPGLGAPLIWIPAVIYLALSGQTGWAIGMTLWGSIIVGSVDNILRPHIVGSEAK 307 Query: 307 LPFLPTFFGLV 317 +P L + Sbjct: 308 MPDLLILLATL 318 >gi|303246923|ref|ZP_07333199.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491630|gb|EFL51513.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 362 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 71/364 (19%), Positives = 141/364 (38%), Gaps = 14/364 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 + + M R ++ I L ++ L F ++ AL++ P+ + Sbjct: 3 LAKNMAPSPDFYRPFLLAIFLAAIAIMGTLLWPFRHAMVLALVLATLVHPLRRHLPRPVQ 62 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG--IPVPRWLSDIP 114 A I T+ + ++PL L E + + + G W+ +P Sbjct: 63 TRRFLAATILTLLTILFVLLPLAGLVTLLTSEAVTFIHTTITWFRTGGLTEAVAWIHALP 122 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 WA + ++ L+ + G+ F+ G L ++ +++ L Sbjct: 123 LPNWAKGYLDVSSIDLRKIETLALSSGGDIGLWFL-----SAGKGVASMGLQLLVLVMFL 177 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ +G +++ L L I V ++ LG ++ G+V G W Sbjct: 178 FYLLAEGERLTELLRKASP-LRRDQEDAIIARFKAVSQAVLLGGLGTSVAIGVVTGIGLW 236 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +AG+ S + G + I ++IP G + I L+ G++ A L L+ + + VD Sbjct: 237 IAGI-SPLLWGAVAVIASLIPVVGLSLIMLPAIISLIATGSVKMAIFLALYWLLVVSSVD 295 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +RP + G ++ + F ++GGV G LGL GP+ +++ + + A E Sbjct: 296 NVVRPLFMRGTARMSLVWVFVSIIGGVLMFGPLGLLYGPLALSISFLFLEIFFDAQNEAD 355 Query: 354 EKIS 357 + S Sbjct: 356 DTSS 359 >gi|315443121|ref|YP_004076000.1| permease [Mycobacterium sp. Spyr1] gi|315261424|gb|ADT98165.1| predicted permease [Mycobacterium sp. Spyr1] Length = 391 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 134/355 (37%), Gaps = 7/355 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +N + + + + + YFL+ + + + ++ + P+Y ++ Sbjct: 3 DDFTVNQKRALAVLTVVALGFGAYFLRNYVLLIAVSAVLAYLFSPLYRRLRTRMG--PGA 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWA 119 A + + + +PL + + L++ E+V+ + + + L D + A Sbjct: 61 AAATTLFAAIAVVALPLTGVLFLAFLQISEMVTGIGHWVEQTDLTALGQRLLDSANELLA 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + P+S++ L N + FA + +I + Sbjct: 121 RVPFADFTLTPESVRDAIGR-LGQNAGEIALGFARDSVGGIVSTVTGVIIFLYVFLALLT 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + L L + ++ +T G IIA +G+ + ++AG+ Sbjct: 180 NGDKVLDLFRDLNP-LGDKVSDIYLAKIGAMVSATVKGQFIIAACQGVAGAISVYIAGIH 238 Query: 240 SHVALGVI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + VI +++ IP G+ I + I + I GN + ++ I +D LRP Sbjct: 239 NGFFMFVIFLTVLSFIPLGSGIVVIPLGIGMAIFGNPVGGIFVVVFHIIATTNIDNLLRP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FLV L + G++ G +G+ +GPVLM +I + ++ Sbjct: 299 FLVPRSAHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYRVVYRDAP 353 >gi|255693657|ref|ZP_05417332.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] gi|260620544|gb|EEX43415.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] Length = 334 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 131/326 (40%), Gaps = 31/326 (9%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + F +L A I KK+ + A++ T + Sbjct: 12 LIVIILFMGVIIFRQITPFLGGLLGAFTIYILVRTQMHHLTEKKKIKRSISALLITAETI 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+VPL + + +++++ + V ++ + Sbjct: 72 FVFLVPLGLTIWMIVNKLQDINLAPQTFVEPIQQVAGFIKE------------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMIIALFFFYRDGFSISQQ 187 L + + FI R G + + +++ MI L+F G + Sbjct: 113 ---KTGYDVLGKDTLSFIVSILPRIGQLIMSSISSLAVNLFVMIFVLYFMLIGGKKMEAY 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + +++ + ++RS +G+ ++AI +G + Y + G P+ + LG + Sbjct: 170 INDILP-FNETNTREVIHEINMIVRSNAIGIPLLAIIQGGIAMIGYLIFGAPNVLLLGFL 228 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +IP G + + V+ YL I G+ F+A LF +GAI + D +R L Sbjct: 229 TCFATIIPMVGTALVWFPVASYLAISGDWFHAIGLFAYGAIVVSQSDNLIRFILQKKMAD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 L T FG+V G+ G +G+ GP Sbjct: 289 THPLITIFGVVIGLPLFGFMGIIFGP 314 >gi|108760978|ref|YP_629833.1| hypothetical protein MXAN_1581 [Myxococcus xanthus DK 1622] gi|108464858|gb|ABF90043.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 395 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 122/336 (36%), Gaps = 6/336 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F A ++ T + +YS K + A + V+ ++PL L + Sbjct: 25 VVRPFAKAFFLAAVLAGTFYGLYSRLSRKLRGHNNLAAGVIVSGVILALLLPLGGLTAFI 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKT 143 + E+ + V V Q V + IP + L + L + + T Sbjct: 85 VTEVSDGVKFVSDTVQREG-VEGLIGKIPSPVRGPVERLLERIPLEQAQLDETLQQQVST 143 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G + M+IALFF +G + ++S+ L ++I Sbjct: 144 QGGTAARAVTGAVAA-TGSIAFQTVMMLIALFFLLTEGARLVSWVESVSP-LRRGQTREI 201 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V + + A + + +A VP+ + + MA+IP Sbjct: 202 LREFRSVSVAVLVSSVATAGVQAAAALVGFLIARVPAALFFAGVAFFMALIPAVGAAIVV 261 Query: 264 AVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ L G+ + A L +WG + + +VD ++P L + FF L+GG+ Sbjct: 262 LVAAALMFFSGHPWAALFLAIWGTVVVGLVDNIVKPLLARRGMHQHAAIVFFALLGGLAA 321 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GL +GP+++A + + + Sbjct: 322 FGTVGLLLGPLIVAFFLALLRIYERDYGRPTPRPGD 357 >gi|322372142|ref|ZP_08046683.1| hypothetical protein ZOD2009_21617 [Haladaptatus paucihalophilus DX253] gi|320548151|gb|EFW89824.1| hypothetical protein ZOD2009_21617 [Haladaptatus paucihalophilus DX253] Length = 331 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 141/348 (40%), Gaps = 18/348 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + ++I +++ +K F VL+A+++G+ P+ + F S+ + L++ Sbjct: 1 MNRQRGFLLFLIAVFGVLATLLVKPFLQYVLAAILLGYILHPVQTRFESRVSARVSALSL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + IVP+ + + LV +V + + + G Sbjct: 61 IS--LTTLVVIVPVGAIAVIAAQQAFTLVRAIVQGDPRFAELIALVERYTGVTIHGRTLQ 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + A D + + M+ L++ DG Sbjct: 119 E--------------LLPAGSSSRLIENALGIFGGLSDALIGLTVMVFILYYLLTDGEEF 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L ++ + +V+ +G ++ I +G++ G + +AGVP V Sbjct: 165 VAWIRR-CTPLPDDVQDELYSEMDRVMWGVLVGNLLVGIVQGILTGIGFVIAGVPGVVFW 223 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+T +++++P GA + + S+YL + A LF++G + + + D LRP + G Sbjct: 224 TVVTTVLSLLPLIGASVVWLPASLYLFLVDRPIAAAFLFVYGTLVVSLSDNYLRPLVSGH 283 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 KL G+ GGV G +GLF GP+++ + + E Sbjct: 284 EAKLNPGILVVGIFGGVYVFGFMGLFFGPIVLGIFRSLLTVFAREYAE 331 >gi|206601945|gb|EDZ38427.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way CG'] Length = 361 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 144/343 (41%), Gaps = 5/343 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + + + + + + +L A I+ F PI++ + K + A++ T+ Sbjct: 21 IAMALFLCLFGLLYLIIAPYLSALLWAAILSFAVTPIHAFLLKKI-GRPAWTALLTTLLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLS 128 + + PLL L E+ V+ + + VP W++ +P G L T + Sbjct: 80 LGFVLAPLLSLGVPLSHELILAVNGIRTFLEDPHSKVPDWIARLPLVGSRIDTLLTGLKT 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 HP L + + I + L ++A F F G +I L Sbjct: 140 HPIGLDVATAKL--QTHILAFGDQVLSLATNLGKWFLKFFIFLLAFFAFTLHGETIWATL 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + +++P R G+ A+ + ++ +W AG+P+ + L I Sbjct: 198 SRLFTQWAGSRMEIPLKVIPATTRGVLYGVFFTALFQAILSAIGFWGAGLPNVLLLTTIA 257 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+ P GA + + +YL + + A LW + I++ ++P +G +P Sbjct: 258 FLAALFPIGAVVVWVPSLLYLTVMHHWIAALIFGLWNLLGGGIIEHFIKPMFIGRSSDIP 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 FL G++GG+ GL+GLFIGPV++++ + K + E Sbjct: 318 FLAILLGVMGGLEAFGLIGLFIGPVVLSVTLALLKALASSPSE 360 >gi|218129309|ref|ZP_03458113.1| hypothetical protein BACEGG_00886 [Bacteroides eggerthii DSM 20697] gi|317475278|ref|ZP_07934544.1| hypothetical protein HMPREF1016_01524 [Bacteroides eggerthii 1_2_48FAA] gi|217988486|gb|EEC54807.1| hypothetical protein BACEGG_00886 [Bacteroides eggerthii DSM 20697] gi|316908532|gb|EFV30220.1| hypothetical protein HMPREF1016_01524 [Bacteroides eggerthii 1_2_48FAA] Length = 336 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 126/307 (41%), Gaps = 20/307 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F + +L AL I K++ + A I T + F++PL + + + Sbjct: 27 ITPFLSGLLGALTIYILVRRQMIYLSEKRKMKRSIAATIITAEAILCFLIPLALVVWLAI 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++ ++ P + A T + ++ + + + Sbjct: 87 INLQN------------------INLDPQAIIAPFEQTAAIIKAKTGYNILGGDSLSFVL 128 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +PR + +++ ++ L+F G + Q ++ + + + Sbjct: 129 SSLPRIGQTLMGGISSFAVNMFVLVFVLYFMLIGGKKMEQYVNGILP-FNETNTQNVVHE 187 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + ++RS +G+ ++AI +G V YW+ G P+ + G +T +++P G + + + Sbjct: 188 INMIVRSNAIGIPLLAIIQGGVAMIGYWIFGAPNILFSGFLTGFASVVPMVGTALIWVPI 247 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY+ + GN A L +GA+ + +D +R + + L T FG+V G+ G Sbjct: 248 AIYMALIGNWLQAIGLAAFGALVISQLDNLIRFIIQKKMADIHPLITIFGVVIGLSLFGF 307 Query: 326 LGLFIGP 332 +G+ GP Sbjct: 308 MGVIFGP 314 >gi|255022092|ref|ZP_05294096.1| protein of unknown function UPF0118 [Acidithiobacillus caldus ATCC 51756] gi|254968450|gb|EET26008.1| protein of unknown function UPF0118 [Acidithiobacillus caldus ATCC 51756] Length = 343 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 141/338 (41%), Gaps = 12/338 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ I + Y L + P+L ++ WP A++ + + + Sbjct: 14 LVLLLIYAGAAYALSPYAGPLLMGAVLAVVGWPWQLRLERYLRLPRWLGALLHATAWVAV 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+P + + + E+ LV + Q G+P+ + + + HL+ Sbjct: 74 IIIPAVAIVDSVLPELHLLVLRW----QTGMPLLTLPLSVQQLPFVGHWLSTHLAEING- 128 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +L + S G ++ + L F + +F G I + L Sbjct: 129 -----AYLSNFFREHADIITSSLGQLWF-FTLHTFFAALTVFALTLHGERIREMLQLGAS 182 Query: 194 HLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L+ ++ + RS +G+ + + EG+++G A+ +AG+ V TA+++ Sbjct: 183 ELWGRDRGERFLLAAREAARSVLIGLIGVGVIEGILIGIAFAVAGLKMWPLWLVATALIS 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP GA A +++L G+ +F WG + + + D +RP L G + PF Sbjct: 243 PIPFGATTVVGAATLWLAFSGHWLVGLIIFAWGLVVITVADLVIRPLLTGSQTRAPFFLV 302 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FF ++GG + GL+GL IGP+L+ + IW+ ++ Sbjct: 303 FFSILGGAQAFGLIGLIIGPILVLMARGIWRSWERRVR 340 >gi|119503128|ref|ZP_01625212.1| hypothetical protein MGP2080_10708 [marine gamma proteobacterium HTCC2080] gi|119460774|gb|EAW41865.1| hypothetical protein MGP2080_10708 [marine gamma proteobacterium HTCC2080] Length = 402 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 69/331 (20%), Positives = 134/331 (40%), Gaps = 11/331 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + F A + ALI+ T +P++ S A + + S + L VP + L Sbjct: 61 ICAKIFAPFAALMAWALILAITLYPLHLRLRDALAWSDARTATVISGSGLLLLGVPTVLL 120 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETF 140 + + ++++ + +P + D P G +W + + L Sbjct: 121 GMSLVDHIASIITQWQQGSLDIVPPDESVKDWPLVGERVYAIWLEASDNLAELLADHGEE 180 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP-AY 199 +++ F+ S + L + +I+ I + + G + S + + L A Sbjct: 181 VRSLLKRFVGGTTSMLTTVGL-FLGAIVVAGIMMAY----GRAGSSAMGRIAVTLVGNAR 235 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +++ + RS G+ +A+ + L+LG + A VP+ L V+ I +I A Sbjct: 236 GEELQVLSVATTRSVATGVIGVAVIQSLLLGIGFLWAEVPAAGVLAVLALITGIIQLPAL 295 Query: 260 ISFTAVSIYLLIKGNIFNAT----CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + V I+L G A+ + I + D L+P L+G + +P G Sbjct: 296 LITLPVLIWLWTSGGAGEASAVMDVVITIYLIIAGLADNVLKPILLGRGVDVPMPVVLIG 355 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +GG+ MGL+GLFIG V++A+ + + Sbjct: 356 ALGGMVGMGLIGLFIGSVVLAIGYQLLWAWV 386 >gi|51245086|ref|YP_064970.1| hypothetical protein DP1234 [Desulfotalea psychrophila LSv54] gi|50876123|emb|CAG35963.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 356 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 137/339 (40%), Gaps = 6/339 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ I V L ++ F + A ++ P + +++ Sbjct: 7 NKSSLLVLVFIISAVFLSMIQQFLMAIFMAGLLSALLSPSHKKLCILLGNRENLSSMLIV 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ L ++PL L + + + + Q I P ++ + + + L Sbjct: 67 AGIVLLILIPLAILITIVVAQAITVSQSIAPWIQKFIAEPTSMT---YYLEKVPFYQEIL 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ S + F+ F + +++ S + M+ F+F G + + Sbjct: 124 PYRDTIIHKSGQLVG-AISSFLIDSLGSFTKLTINFIFSSVIMLYVTFYFLNVGKDLLDK 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +K+ V R+T G II I +G + G ++ +AG+ G + Sbjct: 183 ILFFLP-LQDREEQKLLVRFTSVTRATIKGTIIIGILQGGICGISFAIAGIQGPFFWGTV 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+M++IP G I + I + + N F L + + +D LRP LVG + Sbjct: 242 MAVMSVIPAVGTAIIWGPALIIIALMSNFFGVAVLAIGCGLIAGNIDNFLRPRLVGKDTE 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L FG +GG+ GLLG+ IGP++ AL +W+ Sbjct: 302 MHDLFVLFGTLGGISMFGLLGIIIGPLIAALFLTLWQIY 340 >gi|297570117|ref|YP_003691461.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] gi|296926032|gb|ADH86842.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] Length = 379 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 135/343 (39%), Gaps = 7/343 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ ++ + F + ++ A ++ PIY + + F ++ V+ Sbjct: 6 FLFLFAISSVLVGWLFWPFISVLVLAYLLTRLFRPIYQLINRRLPD--FFASLATCTLVV 63 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL--WTKHLSH 129 L +PL+F E L + A R P + E + Sbjct: 64 LLVFIPLVFFVMALAQEAHGLYNWGRGAGATLGARLREFQTTPLFVHLQETAALLGYSLQ 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P+ + + G+ F+ AS + + + L I+ +FF + + + Sbjct: 124 PEDIGRALAGTARDLGL-FLYDQASTWAANLMMFVLGFFLTIVTIFFLLMEHDRLLNYIF 182 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L L +++ ++ + +G I A+ +G++ G +W + V G I A Sbjct: 183 RLSP-LPDDQERQLFAKFDEITGAVLIGNGICAVIQGIIGGLIFWAFNLGPPVLWGAIMA 241 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A +P G + ++LLIKGN+ +A L + I ++ L+P LVG K+ Sbjct: 242 VLAFLPIVGIGLVMVPTVLFLLIKGNLVDAILLAILYGIITLFIESLLKPKLVGDRAKMH 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L F ++GG+ T G LG+ GP+++ + + + Sbjct: 302 ILLVFLSIIGGLNTFGFLGIIYGPLIVTAFLTLAEIYLANYDR 344 >gi|167765242|ref|ZP_02437355.1| hypothetical protein BACSTE_03630 [Bacteroides stercoris ATCC 43183] gi|167696870|gb|EDS13449.1| hypothetical protein BACSTE_03630 [Bacteroides stercoris ATCC 43183] Length = 336 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 125/307 (40%), Gaps = 20/307 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K++ + A + T + F+VPL + + + Sbjct: 27 ITPFLGGLLGALTIYILVRRQMIYLSEKRKIKRSIAATVITAEAILCFLVPLALVVWLAV 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + L Q I + I + + + + I Sbjct: 87 VN----LQNINLDPQAVIAPFEEAASIIKARTGYNVLSGNSL--------------SFFI 128 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +PR + +++ ++ L+F G + Q ++ L ++I Sbjct: 129 SSLPRIGQTLMGGISSFIVNMFVLVFVLYFMLIGGKKMEQYVNELLP-FNETNTQEIVHE 187 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 + ++RS +G+ ++A+ +G V YW+ P+ + G +T ++IP G + + + Sbjct: 188 INMIVRSNAIGIPLLAVIQGGVAMLGYWIFDAPNILFSGFLTGFASIIPMAGTALVWIPI 247 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y+ + GN F A L ++G++ + +D +R + + L T FG+V G+ G Sbjct: 248 AVYMALIGNWFQAIGLVIFGSLVISQLDNLIRFVIQKKMADIHPLITVFGVVIGLSLFGF 307 Query: 326 LGLFIGP 332 +G+ GP Sbjct: 308 MGVIFGP 314 >gi|169630868|ref|YP_001704517.1| hypothetical protein MAB_3788c [Mycobacterium abscessus ATCC 19977] gi|169242835|emb|CAM63863.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 379 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 127/346 (36%), Gaps = 7/346 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + I +YFL+ + ++ A + + P+Y + S A + Sbjct: 9 QKRVLAVLTGVGIAFGIYFLRDYLILIVVAGVAAYLFSPLYRRLGKRFG--SGIAATLTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++P+ L Y L++ +V V + + D+ + A + Sbjct: 67 LCALGAVVIPVGALVYVATLQITRMVDDVSSWVEGTDMTALGQKAFDVVNSVLARIPFVH 126 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P +L+ + + G + S G + IIF + + Sbjct: 127 VQLTPDTLRQSIGSLTENVGHGLLQVLQSTVGSVAAAVAACIIF-LYVFVSLLVKQDKVL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVAL 244 L L L + ++R T G +IA+ +G+ ++ ++AG Sbjct: 186 TLLRQLNP-LGEEITDLYLDKIGAMVRGTVKGQFVIAMAQGIAGAASVYVAGFRQGFFFF 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ +++IP G I I +++ G+ + W + + +D LRPFLV Sbjct: 245 AILLTALSIIPLGGGIVTIPFGIGMILFGHPVGGLFVIAWHLLVVSNIDNVLRPFLVPRG 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ +GPVLM +I + K Sbjct: 305 ARLDPALMLLAVFSGIAAFGFWGIVLGPVLMIVIVTTIDVYLAVYK 350 >gi|255008391|ref|ZP_05280517.1| putative transmembrane protein [Bacteroides fragilis 3_1_12] gi|313146114|ref|ZP_07808307.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134881|gb|EFR52241.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 323 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 133/333 (39%), Gaps = 30/333 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I ++ +F A++ T + F+VP+ + + + Sbjct: 16 ITPFLGGLLGALTIYILVRRQMMYLGARM--KRSFAALLITGEAILCFLVPISLIVWMLV 73 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + L Q I L+ I + L ++ + Sbjct: 74 ----NKLQDINLDPQAIIAPVEELAGIIKAKTGYD------------------VLGSDTL 111 Query: 147 DFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 FI + G + + +++ ++ L+F G + +D + ++ Sbjct: 112 SFIVSLLPKIGQAVMGGISSFAINLFVLVFVLYFMLIGGTKMESYIDDILP-FNEKNTRE 170 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 ++ + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP G + Sbjct: 171 VTHNINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLVGVLTCFATIIPMVGTALV 230 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ YL + G NA L +G I + D +R L L T FG+V G+ Sbjct: 231 WFPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLP 290 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP++++L + +NK+ Sbjct: 291 LFGFMGVIFGPLILSLFLLFVDMFKKEYLDNKK 323 >gi|118616069|ref|YP_904401.1| hypothetical protein MUL_0177 [Mycobacterium ulcerans Agy99] gi|118568179|gb|ABL02930.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length = 385 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 136/351 (38%), Gaps = 7/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L+ + + + + +L YFL+ +F ++ A + + P+++ F + ++ Sbjct: 4 EFTLSQKRALAIVTLAALLFGAYFLRSYFVLIVVAAVGAYLFTPLFNWFNKRL--NAGLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWAS 120 A + ++ + + IVP+ L ++++ +V + + + + + A Sbjct: 62 ATLTLLTALVVVIVPVGLLVGLAVVQIARMVENIAGWVKTTDLSSLGDKALQLVNELLAR 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++L+ + + + G+ + F S I + + Sbjct: 122 VPFLHVTVTAEALRQMMISVAQNVGLWLLH-FLQNAAGSLAGAVTSGIIFLYVFMALLLN 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L R + ++R T +G +IA+ +G+ ++ ++AG Sbjct: 181 CEKLRTLIGQLNP-LGEEVTDLYLRKMGSMVRGTVIGQFVIALCQGVAGAASIYVAGFHH 239 Query: 241 HVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++ M++IP G I I + GNI + LW + + +D LRP Sbjct: 240 GFFIFAIVLTAMSIIPLGGGIVTIPFGIGMAFYGNIGGGAFVVLWHLLVVTNIDNFLRPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L G+ G G+ IGPVLM LI ++ K Sbjct: 300 LVPRDARLNSALMLTSAFAGIGMFGPWGIIIGPVLMILIVTTIDVYLVVYK 350 >gi|67923851|ref|ZP_00517311.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] gi|67854314|gb|EAM49613.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] Length = 354 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 141/342 (41%), Gaps = 7/342 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++I ++ ++ F VL +I+ +P++ + VI Sbjct: 10 IVDLIIRLFLIGLLLAWCFLLIRPFLGIVLWGIILAIAIFPLFLWLKNLLGGRGKLAGVI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ + + I P+ + + + + + P P + P G + +W Sbjct: 70 LTLLGVGVIIGPVSVISTIFVNNAQAFADSLASGSLVIPPPPEGIETWPVIGERVNRIWE 129 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ + L+ + + A+ G++ L + +SII I + + + Sbjct: 130 LASVNLASVLSQFQPQLEALAKNLLF-LAANIGVVLLKFIVSIIIAGILI----INAEKL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ + + P ++ ++ IR G+ ++ + L++G + + G+P L Sbjct: 185 NSRIRQVFLRITPKQGQEFLQLATGTIRGVTRGIIGVSALQSLLIGIGFMIGGIPFAGLL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ ++A+I G+ + I+ A LW + +VD L+P L+ Sbjct: 245 TLLCLVLAIIQIGSGLVVFPAIIFAWSTMGTVTALLFTLW-MVPCTLVDNILKPILMSKG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + +P + G++GG G+LGLFIGPV+++L + I Sbjct: 304 LPVPTIVILMGVLGGTLVHGILGLFIGPVILSLGYELLVAWI 345 >gi|170723630|ref|YP_001751318.1| hypothetical protein PputW619_4469 [Pseudomonas putida W619] gi|169761633|gb|ACA74949.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 365 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 142/348 (40%), Gaps = 7/348 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L I ++ ++L + + F +L ++I+ T +P+Y + Sbjct: 11 RSRGLLDVLIKAGLVAALVLFAFQVFQPFLELMLWSVILAVTLYPLYQRIKRGSGFKDGY 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A + + V+ + +VP+ + + LVS + + P +++ P G Sbjct: 71 AATLVVLLVLVVLLVPIYLVVMSIGESVDHLVSLIRSDSWSVPVPPDSVANWPLIGPKVH 130 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 LW + + LK+ G + AS G L + +II + + F Sbjct: 131 ALWLSASENLADVIAQWMPQLKSAGRTALGAAASAGGAFLL-FVGAIIISGVIMAF---- 185 Query: 181 GFSISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + K ++ + IR+ G+ IA + L++G + + GVP Sbjct: 186 GDRGEIAAQRIAMRISGEERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVIKGVP 245 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ ++ + A + V IY+L AT +F + D L+P Sbjct: 246 GAGMLAILILMLGIAQAPATLITLPVIIYVLNVEGFTVATIVFAVYTFVAGLADNVLKPL 305 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+G + +P G +GG+ G++GLF+GPV++A+ V++ + + Sbjct: 306 LLGRGVDVPMPVVLIGALGGMVVKGIIGLFLGPVILAVTYVLFWQWVA 353 >gi|148545994|ref|YP_001266096.1| hypothetical protein Pput_0748 [Pseudomonas putida F1] gi|148510052|gb|ABQ76912.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 365 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 140/344 (40%), Gaps = 7/344 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I ++ +++ + + F ++ A+I+ T +P++ + ++A + Sbjct: 15 LLDVLIKAGLVAALVIFAFQVFQPFLELMMWAVILAVTLYPLHCRIQRRTGLKQGYVATL 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + V+ L +VP+ + + LV+ + P ++ P G LW Sbjct: 75 VVLLVLVLLLVPIYLVMMSIGESVDSLVTLLKSGAWSVPVPPDSVATWPLIGPKVHALWL 134 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ +K G+ + AS G L + +II + + F G Sbjct: 135 AASENMASVLNQWMPQIKGAGLTVLGAAASAGGAFLL-FIGAIIISGVIMAF----GERG 189 Query: 185 SQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + K ++ + IR+ G+ IA + L++G + + GVP Sbjct: 190 EIAAQRIAMRVSGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFIVKGVPGAGM 249 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++ ++ + A + V IY+ AT +F + D L+P L+G Sbjct: 250 LAIVILMLGIAQAPATLVTLPVIIYVFNAEGFTVATIIFAVYTFVAGLADNVLKPLLLGR 309 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + +P G +GG+ G++GLFIGPV++ + V++ + + Sbjct: 310 GVDVPMPVVLIGALGGMVVKGIIGLFIGPVILGVAYVLFWQWVA 353 >gi|308446460|ref|XP_003087184.1| hypothetical protein CRE_07198 [Caenorhabditis remanei] gi|308260230|gb|EFP04183.1| hypothetical protein CRE_07198 [Caenorhabditis remanei] Length = 241 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 8/246 (3%) Query: 43 TSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 +WP+Y + T A + V+ + +PL F + E + L + Sbjct: 1 MTWPMYKRILRMFGSNRPTLSASLMITLVVLVVGIPLTFAIFILQHEGRNLYFDLQRQLS 60 Query: 102 HG-IPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 G + VP ++ ++P G S + + P SL +++ + + Sbjct: 61 SGHLTVPDFIRELPIIGKEVSRTVREINADPTSLSQTIGLWIQGH-----MNYGKFVLNE 115 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + + F I++LFFFYRDG +I +Q+ + L + + R+ G+ Sbjct: 116 ITKNLVKLGFAIMSLFFFYRDGQTILEQVSKALQMLIGPRIHHYLDTISETTRAVVYGVG 175 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + A+ + + G +Y++AGVP+ + L ++T +MA+IP G P+++ AVS++L +G A Sbjct: 176 LTAVAQAFLAGVSYFVAGVPNPMVLTIVTFLMALIPFGPPVAYGAVSLWLFSQGQTMEAI 235 Query: 280 CLFLWG 285 + WG Sbjct: 236 GVMAWG 241 >gi|300711827|ref|YP_003737641.1| hypothetical protein HacjB3_12330 [Halalkalicoccus jeotgali B3] gi|299125510|gb|ADJ15849.1| hypothetical protein HacjB3_12330 [Halalkalicoccus jeotgali B3] Length = 343 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 17/351 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +R + + +SL + F + +L A+I+ + PI + Sbjct: 1 MSTRSERSRTFLRIVAIGAGGLSLLIVLPFLSWILVAVILAYVLRPIDDRLSRRLG--PG 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A ++ + + L ++P+L + + ++L + + + V Sbjct: 59 LSAGLSILGGLFLVVLPVLVVLGVAANQARQLAATFDPGDVARLDV------------VI 106 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ +KT + S G + L + LF+ +D Sbjct: 107 AEHLGVQVDMATVHDAFSGAIKTGARGLVGNLFSIIG-GLPELFLGFTVLFFVLFYLLKD 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S + L ++ + P +++ ++ ++ +G ++A + ++LG A+ + G+ + Sbjct: 166 GESAVEWLRAVVP-IEPDVREELFEETGLLLHNSLVGTAVVAGAQAVLLGVAFLVLGLGN 224 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V V T I AM+P GA I + SIYL + G A LF++GAI + VD LRP Sbjct: 225 VVFWIVTTFIAAMVPLLGASIVWIPASIYLFVVGRPVPAVALFVFGAIAISTVDNILRPM 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ +L + T G+ GG+ G +GLFIGPV++ L ++ + + Sbjct: 285 VMRRGAQLSPVLTIIGIFGGIAVFGFVGLFIGPVVLGLTKLLIELLVREYP 335 >gi|288561240|ref|YP_003424726.1| hypothetical protein mru_1984 [Methanobrevibacter ruminantium M1] gi|288543950|gb|ADC47834.1| hypothetical protein mru_1984 [Methanobrevibacter ruminantium M1] Length = 361 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 17/328 (5%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 VL +I + PI + +K + I+ + L ++PL+ LF Y E+ Sbjct: 2 VLLGAMIAYGLTPIANKIQTKIKY-----PSISIFLALILVVIPLILLFAYVFYEITVFA 56 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ + G EL + SL E+ L ++ + Sbjct: 57 DVFFNSSDLAGMDINNALNAFVGNLPVELQGFIKPYMGSLSTGLESAL-----SYVLAYT 111 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + F + + + +I ++++F RDG I + + + A++ + + V++S Sbjct: 112 VKLVKGFSNVLIQLFVLICSIYYFTRDGDLIWENIFVFIPNEHKAFFDRTFYEIANVLKS 171 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY-LLI 271 F G + A+ G++ G Y+L G + LG+IT I +IP G I + A++IY + + Sbjct: 172 IFYGHFLTAVIIGVMGGVGYYLLGYKFALFLGIITGIFQLIPIFGPWIVYWALAIYAIFV 231 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+I A LWG L + D +RP L +P L G + G G++G +G Sbjct: 232 AGDIVQAVLTVLWG-FVLSLSDMYIRPVLASNYADMPSLILLVGFMAGPYVFGIVGFILG 290 Query: 332 PVLMALIAVIWKESIMAIKENKEKISSN 359 P+++ + + I ++KE EK + N Sbjct: 291 PLILGVCYAV----IKSLKEELEKDNWN 314 >gi|323956589|gb|EGB52327.1| ydiK protein [Escherichia coli H263] Length = 247 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 6/231 (2%) Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ ++ T F+ + A+ G + L ++F + Y G ++ Sbjct: 8 WIVGGTAIMAKVRPYIGTTTTWFVGQ-AAHIGRFMVHCALMLLFSAL----LYWRGEQVA 62 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q + L + + IR+ LG+ + A+ + ++ G ++GVP L Sbjct: 63 QGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLT 122 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++ G I+L G+ T L +W + +D +RP L+ Sbjct: 123 VLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGA 181 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 182 DLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 232 >gi|255035092|ref|YP_003085713.1| hypothetical protein Dfer_1300 [Dyadobacter fermentans DSM 18053] gi|254947848|gb|ACT92548.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 345 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 140/359 (38%), Gaps = 22/359 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M N + ++++ L + F L FF L AL + Y K++ + Sbjct: 1 MAPEFNNRIRQVSFLLIVTALAIIVFKQLYIFFPGFLGALTLYILCRRYYFHLTEKRKWN 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + A++ V M + P+ ++ ++ NQ + R L + G Sbjct: 61 KSLTAILFMVLFMACIVAPVYLALQMVFQKVTGIMDNPEQVNQAIAAISRQLREWTGQDL 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + + FIP + M+ + ++ ++ +F + Sbjct: 121 LTK--------------EATADMGKKAAGFIPAILNSSAMMLGN----LLMILFLAYFMF 162 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++G S+ + +D L ++ ++R+ LG+ +I++ +GLV YW+ G+ Sbjct: 163 KNGRSMERTIDDFIP-LKHKNIDLLADETCGMVRANALGIPLISLIQGLVALLGYWVVGI 221 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 V LG+IT A P G + + + I+L KG A L + + +D R Sbjct: 222 EDFVLLGLITGFCAFFPVIGTALIWLPLVIFLFSKGESGKAIGLAAYSVTVIGNIDYVAR 281 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + + + T GL+ G++ G G GP+L++ + ++ + ++ + Sbjct: 282 ITFLQKVGNVHPVITILGLIAGLKLFGFWGFIFGPLLISYLMLLVRIYKNEFSGSRSEP 340 >gi|110634577|ref|YP_674785.1| hypothetical protein Meso_2229 [Mesorhizobium sp. BNC1] gi|110285561|gb|ABG63620.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 392 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 65/343 (18%), Positives = 139/343 (40%), Gaps = 17/343 (4%) Query: 3 ETMLNPQGIMRWMIMFIIL---VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 E M + M ++ +L +S F ++ A+++G P+ + Sbjct: 21 ERMDSSAARMLVLVAAAVLGVYLSYRLALPFLPALVWAVVLGVLIAPVQPKLEMHLG--A 78 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A ++ + I+ LLF+ + E + + A + ++ +P Sbjct: 79 NVAAFVSASVAALIVILLLLFIVQQLVREAADGAMNIESALRSS-DWQSIINGVPIFSTL 137 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L + ++ ++ ++ ++ ++++ + LF+F R Sbjct: 138 AAWLGERLDLAGMMGRIA---------QWLTAQSATLLRGSINQAITLLLVFYMLFYFLR 188 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + L L I + +T G I+A +G + G +WL G+P Sbjct: 189 DRKLAVRALGEFSP-LNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLMFWLLGLP 247 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G++ ++A++P GA + + +I+L ++G A L +WG + + +D L P Sbjct: 248 APAFWGLVMGLLAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIATIDNLLYP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 VG +KL + F G VGG+ G GL +GP +++ + Sbjct: 308 IFVGNRLKLHTVLAFIGAVGGIILFGASGLVLGPATISITLAL 350 >gi|187478932|ref|YP_786956.1| membrane protein [Bordetella avium 197N] gi|115423518|emb|CAJ50053.1| putative membrane protein [Bordetella avium 197N] Length = 371 Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 139/348 (39%), Gaps = 9/348 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I ++ + F +L ++I+ T PI+ +++ V M F Sbjct: 26 LIGGLVYWCYRVAEPFIGLLLWSMILAVTLAPIHERLARWLGGRPKSASLLLVVLTMLAF 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQS 132 ++P L + L + IP P ++S++P G + W + ++ Sbjct: 86 MIPGALLASSLAETVPRLFHQAEGEPALRIPDPPAFISNLPLVGGQLHDAWAAATENIET 145 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T ++ A+ G FL + +I + L + G + D + Sbjct: 146 VLKPLQPAL-TGAAKWLLNSATSAGAGFLIFLAAIAIAGLVLIY----GPHSKRFADDIA 200 Query: 193 EHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + P + + IR+ G+ +A+ + + G LAGVP ++ + Sbjct: 201 SRIAGPQRGHDLILLTVSTIRAVAQGVIGVALIQAALGGLGMLLAGVPGAGIWAIVALAV 260 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ V+IY+ + + A +W I + +++ L+P ++ I +P Sbjct: 261 CIVQLPILAVLGPVAIYVFLNNSTPVAIIFAIWSVI-VALLENVLKPLMLARGISIPLPI 319 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GGV GL+GLF+GPV AL V++ + + +SSN Sbjct: 320 ILIGALGGVLAAGLVGLFLGPVGFALGYVLFMQWVREPLAGPPVMSSN 367 >gi|300709901|ref|YP_003735715.1| hypothetical protein HacjB3_02650 [Halalkalicoccus jeotgali B3] gi|299123584|gb|ADJ13923.1| hypothetical protein HacjB3_02650 [Halalkalicoccus jeotgali B3] Length = 381 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 147/349 (42%), Gaps = 14/349 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + ++++ + + +L A+++ + P++ T A+ Sbjct: 44 LTEQSALGVIAIASGILAVLLMLPYLQYILLAVVLAYALMPLHKGLKRIVG--PTASALA 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + I+P+L++ + + L ++ + + L + ++++ Sbjct: 102 LITASFLTIIIPVLYIVVIAVQQASGLTETLLEEGLSVTAIQQRLDSSGYSIDSNDVREA 161 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ + + L +S+ + +F RDG + Sbjct: 162 YEANQDPINSGLDGMLGGT---------LEIIGGIPSIAISLTVTMFVVFGLLRDGDRLV 212 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + ++ + +++ ++ +G I++ + ++LG +W+ VP + L Sbjct: 213 AWFQTIVP-ISDEVKTELFGRLDRLMWASVIGNVIVSAIQAILLGIGFWVLEVPGAIFLT 271 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+T ++A++P G ++ V+IYLLI G A + +G I + + D +RP ++G Sbjct: 272 VVTFLLALLPLIGVFGTWIPVAIYLLIVGRPLAALLMVGYG-ILVSLSDTYIRPAVIGKS 330 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +L G+ GG+ +G +GLF+GPV++ + + ++K Sbjct: 331 GELSSAVIVVGIFGGIAVLGPIGLFVGPVILGTAKISFDLFAREWYKSK 379 >gi|116252884|ref|YP_768722.1| transmembrane transporter protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257532|emb|CAK08629.1| putative transmembrane transporter protein [Rhizobium leguminosarum bv. viciae 3841] Length = 368 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 140/348 (40%), Gaps = 5/348 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ ++ V + F +L ++I+ P++ ++ + Sbjct: 14 RPSIIHAAVQLGIVALLVYVCARIMLPFLGLLLWSVILAVMLHPLHLRLSNRIGNR--WS 71 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + + + + +VP+ + + LVS + + P P WL+D+P Sbjct: 72 ASLIGMVGVAVVLVPMYLVVTSLGSSIYWLVSGLQNHSLTIPPPPAWLADVPAVGAKLSA 131 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L + + T ++ FA L + LSI + + + Sbjct: 132 GWSLAAANLPLALSQYGEMLTKPAAWLASFAGGLATGGLSFVLSIAIAAVLVAYAKGAAA 191 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L+ + A ++ + IR +G+ +A+ + +++G ++ G+P+ Sbjct: 192 FALSLLELVTN--SKARGARLIHLTASTIRGVAVGVVGVAVIQSMLVGIGFFAIGLPAAG 249 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 AL ++T ++A++ + V Y+ + A +W + D L+P ++G Sbjct: 250 ALTLVTFLLAVVQIPPLLLTLPVMAYVFVTEATTPAIIFAIWSFFA-GLSDNLLKPLMLG 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P G++GG+ GLLG+F+GPVL+A+ V+ E + Sbjct: 309 RGSDVPMPVILVGVIGGMIADGLLGIFVGPVLLAVGFVLLMEWLHERP 356 >gi|15608241|ref|NP_215617.1| hypothetical protein Rv1101c [Mycobacterium tuberculosis H37Rv] gi|15840540|ref|NP_335577.1| hypothetical protein MT1133 [Mycobacterium tuberculosis CDC1551] gi|148660887|ref|YP_001282410.1| hypothetical protein MRA_1112 [Mycobacterium tuberculosis H37Ra] gi|148822313|ref|YP_001287067.1| hypothetical protein TBFG_11122 [Mycobacterium tuberculosis F11] gi|167969235|ref|ZP_02551512.1| hypothetical protein MtubH3_14895 [Mycobacterium tuberculosis H37Ra] gi|215402931|ref|ZP_03415112.1| hypothetical protein Mtub0_04401 [Mycobacterium tuberculosis 02_1987] gi|215410721|ref|ZP_03419529.1| hypothetical protein Mtub9_05210 [Mycobacterium tuberculosis 94_M4241A] gi|215426395|ref|ZP_03424314.1| hypothetical protein MtubT9_08412 [Mycobacterium tuberculosis T92] gi|215429975|ref|ZP_03427894.1| hypothetical protein MtubE_04673 [Mycobacterium tuberculosis EAS054] gi|215445267|ref|ZP_03432019.1| hypothetical protein MtubT_04733 [Mycobacterium tuberculosis T85] gi|218752788|ref|ZP_03531584.1| hypothetical protein MtubG1_04765 [Mycobacterium tuberculosis GM 1503] gi|219556985|ref|ZP_03536061.1| hypothetical protein MtubT1_06650 [Mycobacterium tuberculosis T17] gi|253799860|ref|YP_003032861.1| hypothetical protein TBMG_02883 [Mycobacterium tuberculosis KZN 1435] gi|254231381|ref|ZP_04924708.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|254364007|ref|ZP_04980053.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254550098|ref|ZP_05140545.1| hypothetical protein Mtube_06519 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200141|ref|ZP_05767632.1| hypothetical protein MtubT4_08443 [Mycobacterium tuberculosis T46] gi|289442532|ref|ZP_06432276.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289555113|ref|ZP_06444323.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289569093|ref|ZP_06449320.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289744845|ref|ZP_06504223.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749636|ref|ZP_06509014.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289753166|ref|ZP_06512544.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289757189|ref|ZP_06516567.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289761240|ref|ZP_06520618.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|294993282|ref|ZP_06798973.1| hypothetical protein Mtub2_01932 [Mycobacterium tuberculosis 210] gi|297633640|ref|ZP_06951420.1| hypothetical protein MtubK4_05944 [Mycobacterium tuberculosis KZN 4207] gi|297730627|ref|ZP_06959745.1| hypothetical protein MtubKR_06034 [Mycobacterium tuberculosis KZN R506] gi|306775256|ref|ZP_07413593.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306781830|ref|ZP_07420167.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306788174|ref|ZP_07426496.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|306792503|ref|ZP_07430805.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|306796908|ref|ZP_07435210.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306802786|ref|ZP_07439454.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306806968|ref|ZP_07443636.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306967170|ref|ZP_07479831.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|307079086|ref|ZP_07488256.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307083650|ref|ZP_07492763.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|313657957|ref|ZP_07814837.1| hypothetical protein MtubKV_06039 [Mycobacterium tuberculosis KZN V2475] gi|8928492|sp|O53449|Y1101_MYCTU RecName: Full=UPF0118 membrane protein Rv1101c/MT1133 gi|2896738|emb|CAA17217.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13880717|gb|AAK45391.1| membrane protein, putative [Mycobacterium tuberculosis CDC1551] gi|124600440|gb|EAY59450.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|134149521|gb|EBA41566.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148505039|gb|ABQ72848.1| hypothetical protein MRA_1112 [Mycobacterium tuberculosis H37Ra] gi|148720840|gb|ABR05465.1| conserved membrane protein [Mycobacterium tuberculosis F11] gi|253321363|gb|ACT25966.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|289415451|gb|EFD12691.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289439745|gb|EFD22238.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289542847|gb|EFD46495.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289685373|gb|EFD52861.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690223|gb|EFD57652.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289693753|gb|EFD61182.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289708746|gb|EFD72762.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|289712753|gb|EFD76765.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|308216193|gb|EFO75592.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308325466|gb|EFP14317.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308335191|gb|EFP24042.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308338997|gb|EFP27848.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308342664|gb|EFP31515.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308346550|gb|EFP35401.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308350470|gb|EFP39321.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308355121|gb|EFP43972.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308362999|gb|EFP51850.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308366647|gb|EFP55498.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323720381|gb|EGB29475.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326904672|gb|EGE51605.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328459605|gb|AEB05028.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 385 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 128/351 (36%), Gaps = 7/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L + + + + +L YFL+ +F ++ A + + P++ F + ++ Sbjct: 4 EFTLTQKRALAILTLIALLFGAYFLRNYFVLIVVAAVGAYLFTPLFKWFTKRF--NTGLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWAS 120 A +S + +VP+ L ++++ +V V + + G++ Sbjct: 62 AACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDKILQFVNGLFDR 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + +L+ + + G + F S I + + Sbjct: 122 VPFLHITVTADALRKAMISVAQNVGEWLLH-FLRDAAGSLAGVITSAIIFVYVFVALLVN 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L + + ++R T G +IA +G+ ++ ++AG Sbjct: 181 REKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFHH 239 Query: 241 HVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++ +++IP G I I ++ GNI + LW + + +D LRP Sbjct: 240 GFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNIDNVLRPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L + G+ G G+ IGPVLM LI + K Sbjct: 300 LVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|327398765|ref|YP_004339634.1| hypothetical protein Hipma_0605 [Hippea maritima DSM 10411] gi|327181394|gb|AEA33575.1| protein of unknown function UPF0118 [Hippea maritima DSM 10411] Length = 338 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 132/342 (38%), Gaps = 12/342 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ I + + F+ ++ + I +P++ K S +++ + V+ + Sbjct: 8 LFLVIIAIAFTAIMLPFWKSLVWGVTIAIVFYPLFERLSKKI-SSKNIASLLTILIVLII 66 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +P+ Y + E ++ + + + + + + K S Sbjct: 67 IALPITLGVYIMVDESEKFMGNIENIKSSFNTIIVKIQNFSKLKIFAPYIDKLDDALFS- 125 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L N I + +F I F+ RD + S+ + Sbjct: 126 -------LIKNTGVLITKNVGAIFSQTYTIAAEFLFSFIIAFYLIRDADDFLNYISSIID 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + KI + + I +T LG + A +G++ + + G+ + + A+ + Sbjct: 179 D--KESFYKILKSIRDSINATVLGGVLTAFIQGIIGAIGFLIVGLNAFFLWMFLIAMFSF 236 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + +IYLLI G + WG++ + VD RP ++ I + + Sbjct: 237 VPLVGTAVIWIPAAIYLLISGAYIKGAFILAWGSLAIGTVDNYFRPIIISSKINIHSMVL 296 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FFG++G + G +G+ +GPV++++ V+ K + + + Sbjct: 297 FFGILGSIVVFGPIGIILGPVIISVGDVLVKTYVSNKAKRRH 338 >gi|197121208|ref|YP_002133159.1| hypothetical protein AnaeK_0794 [Anaeromyxobacter sp. K] gi|196171057|gb|ACG72030.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 364 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 66/332 (19%), Positives = 125/332 (37%), Gaps = 9/332 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ F+ A ++ ++ A + TV V+ ++P+ L Sbjct: 28 WMVRPFWVAFFLAAVLTAALRHWMEWLSARLRGRRALAAGLLTVGVLLAGVIPVAALGAV 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFLKT 143 + E + + + A Q V +S +PG + L PQ Sbjct: 88 LIREAVDGIQWLRSALQSEG-VWGLVSRLPGPIEDLAHRAVAALGDPQRQLQQLAGQGGQ 146 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + L M+IALFFF DG + +D+ L ++ + Sbjct: 147 AAA-----AVGGVLAATGTFVLQTAMMLIALFFFLVDGQRLIAWVDARVP-LRAGQFRTL 200 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + S A + + + Y++A P+ + L V+T ++A+IP GA Sbjct: 201 VEDFRRTTLSVVAATAATAGIQTVTALAGYFIARAPNPIFLAVLTLLVALIPAVGATAMV 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ G+ + L +WGA + +VD RP+L+ G + L FF L+GG+ Sbjct: 261 LVVAALQFATGHTVSGIFLAVWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAA 320 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GL +GP++ + + + + Sbjct: 321 FGGIGLILGPLVATFLVTVLNMYRREFGKPSQ 352 >gi|197335961|ref|YP_002155739.1| hipothetical membrane protein [Vibrio fischeri MJ11] gi|197317451|gb|ACH66898.1| hipothetical membrane protein [Vibrio fischeri MJ11] Length = 353 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 123/331 (37%), Gaps = 5/331 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++ LK F V+ II +PI + +K S ++ + L + Sbjct: 21 IAILVFWCFSILKPFMLLVVWGGIIATALYPIVTWGHNKFGISKGKVSAGLAFIGVVLLV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL+ L ELV+ + + P + + H S + Sbjct: 81 IPLVALSTGLYTSGSELVAGYQNGTISIPKPSINVKEWPLIGDKAYAFGIHASSNLESVL 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + G F+ + +S I F + + + L Sbjct: 141 LKYGEEVKAIVGKLASIVGSLGGGFIQFIISTIIAGA----FMANADKCERAFVLVANRL 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + +RS G+ +A+ + ++ G GVP+ ++ ++A+I Sbjct: 197 TGEHGEALTTLSKTTVRSVVQGVIGVAVIQSVMAGLGMAFVGVPAIGLWMLLVMLIAIIQ 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ V +Y+ A +W I + D L+P L+ + P L G Sbjct: 257 LPPILALLPVILYVFSVDTTTTAVLFLIWC-IVVSGSDAILKPMLLSRGSETPMLVILLG 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +GG+ G++GLF+G V+++L ++ + Sbjct: 316 ALGGMAMSGIVGLFVGAVILSLTYQLFMVWL 346 >gi|313497077|gb|ADR58443.1| Permease [Pseudomonas putida BIRD-1] Length = 365 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 139/344 (40%), Gaps = 7/344 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I ++ +++ + + F +L A+I+ T +P++ + + A + Sbjct: 15 LLDVLIKAGLVAALVIFAFQVFQPFLELMLWAVILAVTLYPLHCRIQRRTGLKQGYAATL 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + V+ L +VP+ + + LV+ + P ++ P G LW Sbjct: 75 VVLLVLVLLLVPIYLVVMSIGESVDSLVTLLKSGAWSVPVPPDSVAAWPLIGPKVYALWL 134 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ +K G+ + AS G L + +II + + F G Sbjct: 135 AASENMASVLNQWMPQIKGAGLTVLGAAASAGGAFLL-FIGAIIISGVIMAF----GERG 189 Query: 185 SQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + K ++ + IR+ G+ IA + L++G + + GVP Sbjct: 190 EIATQRIAMRVSGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVVKGVPGAGM 249 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++ ++ + A + V IY+ AT +F + D L+P L+G Sbjct: 250 LAIVILMLGIAQAPATLVTLPVIIYVFNAEGFTVATIIFAIYTFVAGLADNVLKPLLLGR 309 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + +P G +GG+ G++GLFIGPV++ + V++ + + Sbjct: 310 GVDVPMPVVLIGALGGMVVKGIIGLFIGPVILGVTYVLFWQWVA 353 >gi|254481333|ref|ZP_05094578.1| hypothetical protein GPB2148_1806 [marine gamma proteobacterium HTCC2148] gi|214038496|gb|EEB79158.1| hypothetical protein GPB2148_1806 [marine gamma proteobacterium HTCC2148] Length = 337 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 68/333 (20%), Positives = 137/333 (41%), Gaps = 10/333 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F +L ALI+G T +P++ SK + A + ++ + L P + L Sbjct: 1 MFNPFLNLMLWALILGMTLFPLHQKLASKFGGNQGRAATVMVLAGLLLLGYPAVKLSSSL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ ++ + + P G W + ++ ++ +++ Sbjct: 61 ASQLTDIHHAYEAGTLALPEPNASVENWPVIGKNVYSAWQEAANNLPEFLADNKANIESV 120 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYWKKI 203 + S G I L + + I I + F G S ++ + P K+ Sbjct: 121 IKSGLAVAKSTAGGIGL-FMAAFILAGIMMAF----GHGGSGATLTIFSRIAGPEQGPKM 175 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + RS +G+ +A+ + +++G + L GVP+ L +I ++A++ A + Sbjct: 176 HNLATMTTRSVAVGVLGVAVIQAVLMGLIFILIGVPAAGLLALIIMMLAIVQLPAMLVGI 235 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V I++ G+ AT W + L + D L+P L+G + P G +GG+ Sbjct: 236 PVIIWVWNGGD-AGATMNTFWTVVILVSGLADNVLKPLLLGRGVDAPMPVILIGALGGMI 294 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G +GLFIG V++A+ I+ + + +E E Sbjct: 295 SAGFIGLFIGAVVLAVGYQIFMQWVAEHEEELE 327 >gi|290770140|gb|ADD61900.1| putative protein [uncultured organism] Length = 310 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 131/329 (39%), Gaps = 20/329 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L AL I K++ + A + T + F+VPL + + ++ ++ Sbjct: 1 MGGLLGALTIYILVRKQMMYLSDKRKMKRSIAATLITAEAILCFLVPLGLVVWLAVVNLQ 60 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ P + A ++ ++ + I +P Sbjct: 61 N------------------INLDPQAIIAPFEEAANIIKAKTGYYILGKDTVAYVISILP 102 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R + ++I ++ L+F G + Q ++ L + + + + Sbjct: 103 RIGQAIMGGISSFAVNIFVLVFVLYFMLIGGKKMEQYVNDLLP-FNDDNTQNVIHEINMI 161 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 +RS +G+ ++A+ +G V YW+ G P+ + G +T ++IP G + + +++Y+ Sbjct: 162 VRSNAIGIPLLAVIQGGVAMIGYWIFGAPNILFAGFLTCFASIIPMVGTALVWFPIAVYM 221 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + GN A L ++G + +D +R + + L T FG+V G+ G +G+ Sbjct: 222 ALIGNWVQAIGLAIYGGAVISQLDNLIRFIIQKKMADIHPLITVFGVVIGLSLFGFMGVI 281 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 GP+L++L + + + K + Sbjct: 282 FGPLLLSLFFLFVDMFKRGYLDARGKTTE 310 >gi|148974917|ref|ZP_01811897.1| hypothetical membrane spanning protein [Vibrionales bacterium SWAT-3] gi|145965426|gb|EDK30675.1| hypothetical membrane spanning protein [Vibrionales bacterium SWAT-3] Length = 355 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 126/339 (37%), Gaps = 7/339 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ L+ F V+ II +P+ + +K S + + + + L ++P Sbjct: 23 MLVYWCFSILRPFILLVVWGAIIATALYPVAVAISNKTGLSKGKASALLSFIGVLLLLIP 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKIL 136 L+ L +L++ + L +IP G S+ + + I Sbjct: 83 LVALSSGIYTSASDLMTGLQDGTLSLPKPKESLQEIPFIGEKVYATLVHASSNIEGVFIK 142 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 LK A+ + I I F + + L L Sbjct: 143 YAEELKA-----FATKAASILGSLGGGFIQFIISTIIAGAFMSNADKCQTGVTHLVARLT 197 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 198 DGKGVELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAAMWALAVLLIAIIQL 257 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ IY+ + A+ +W I + D L+P L+ +P L G Sbjct: 258 PPILALLPAIIYMFSVESTLAASFFLVWC-ILVSGSDAILKPMLLSRGSHIPMLVILLGA 316 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GG+ G++GLF+G V+++L + + + ++K Sbjct: 317 LGGMAMSGIVGLFVGAVILSLSYELMVSWLGLEPKEEDK 355 >gi|157962115|ref|YP_001502149.1| hypothetical protein Spea_2294 [Shewanella pealeana ATCC 700345] gi|157847115|gb|ABV87614.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 360 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 141/358 (39%), Gaps = 6/358 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + + + + ++ I+ P+++ + S +V Sbjct: 6 LKPHHLVLLFALAIAFYACYLLISPYLGSIVLGFIVSILFLPLHTRIQQRMPNSPNMASV 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASEL 122 + V + ++PLLF+ M E ++ G +L+ I G+ Sbjct: 66 FSCTLVTVMVLIPLLFVAMAIMNEGINFMTNAYGWLTDGGA-KSFLAHPYIQSGVALLNK 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + T + ++ D L M+ LFFF RD Sbjct: 125 WLPFDTIKIDELVQQAAGKVTQLSSSLLTASTGIAGDVADTVLDFGLMLFVLFFFLRDQQ 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + L + I + V +S LG + A+ +G + G A LAG + Sbjct: 185 KIIDNTRHIIP-LSRSQQGLIFNEIGVVAKSAVLGAFLTALAQGALGGIAMSLAGFSG-L 242 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A + IP G + + SIYL I G+ A L +WG + + +D LRP+L+ Sbjct: 243 FWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWALFLIVWGVVVIGSIDNFLRPWLM 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V+ + + K+ E+ Sbjct: 303 QGNTGMSTLLLFFSLLGGLQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE 360 >gi|170695146|ref|ZP_02886294.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170139998|gb|EDT08178.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 367 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 129/342 (37%), Gaps = 7/342 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ + + F ++ ALI+ T +P+ +A + + + Sbjct: 24 LVAVLAIFCFRIFFPFLNLMIWALILAITLYPLQVGLRRTLAGKDGLIATLIILIAFGVI 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 + P L + ++ P ++ P G + W + L Sbjct: 84 LAPTYLLGVAVAESIDNAIAVFKSGTFSIPPPADSVASWPVVGQRVYDFWQQAAVDLTGL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + LK G+ + G L + ++I I G + + + Sbjct: 144 ALKFAPQLKDTGLALLATVTG-LGAGLLLFFAALIVAGI----LMAHGETGHKSAVEIAS 198 Query: 194 HLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P +I+ + IR+ G+ IA + L++G A+ + G+P L + ++ Sbjct: 199 RISGPENGPQIAELCTSTIRAVAQGVVGIAFIQMLLIGVAFVVMGIPGAGLLALAVLLLG 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ A + V I+++ + T +F + D L+P L+G + +P Sbjct: 259 IMQLPATLITIPVIIFVIATQGVSAITIVFSVYVFVAGLADNVLKPLLLGRGVAVPMPVV 318 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ T G++GLFIGPV++A+ ++ + K+ Sbjct: 319 LIGALGGMVTGGVIGLFIGPVMLAVGYQLFWRWVKDQPRPKQ 360 >gi|300710664|ref|YP_003736478.1| hypothetical protein HacjB3_06475 [Halalkalicoccus jeotgali B3] gi|299124347|gb|ADJ14686.1| hypothetical protein HacjB3_06475 [Halalkalicoccus jeotgali B3] Length = 335 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 134/340 (39%), Gaps = 15/340 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + +I ++ VS ++ F +L AL++ F P++ K A Sbjct: 1 MNVRRGFLLGLIALLLAVSFAMVQPFLQYLLLALLLAFVLHPLHERLEPKVGG--QLSAA 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I V + F++P + + + L ++ G G L Sbjct: 59 ILIVGSLIAFVIPFVVVGATVAGDAMALAQQLQSGGVSGF----------GLGQVEALIQ 108 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ L + + A + + + L++ +DG + Sbjct: 109 QYTGFQIDLASRVSAY-AEQAAGIVAGSAPGVFGTISHAFVGLGLGLFVLYYLLKDGSKL 167 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L ++ + ++ + LG ++AI +G + G ++ G+P+ Sbjct: 168 MGWLRETLP-LPSTVQDELYASLNEITWAVLLGHVLVAIVQGAIAGIGLFVVGIPNATLW 226 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I ++++IP G+ + + +IYL+ G L L+G I + D LRP +V Sbjct: 227 TFIMIVLSLIPIIGSFLVWGPAAIYLVATGQTVFGVGLLLYGTIIVNATDNFLRPIVVDR 286 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 K+ G++GGV +G +GLF+GPV++ + V+ + Sbjct: 287 HAKINPSIIIIGVIGGVYLIGFMGLFVGPVIVGALKVVLE 326 >gi|209695373|ref|YP_002263302.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009325|emb|CAQ79591.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 353 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 134/336 (39%), Gaps = 7/336 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ L+ F V+ II +P+ S +K S ++ + L +VPL Sbjct: 24 LLYWCFSILRPFILLVVWGGIIATALYPVVSWGHNKFGISKGKVSGGLAFVGVLLLLVPL 83 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILS 137 + L EL++ ++D P G A + S+ +S+ + Sbjct: 84 IALSTGLYTSGSELITGYQDGTISIPKPAASMADWPVIGEKAYAFGVQVSSNLESVLLKY 143 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 +K + A G F+ + +S I + F + + + + L Sbjct: 144 GEEVKAIAGQ-LASLAGSLGGGFIQFIISTIIAGV----FMANADKCERAFIVIADRLTG 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + ++ + K +RS G+ +A+ + ++ G AGVP+ ++ ++A+I Sbjct: 199 EHGEALTTLSKKTVRSVVQGVIGVAVIQSMMAGLGMAFAGVPAIGLWMLLVMLVAIIQLP 258 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 ++ V Y+ A +W I + D L+P L+ +P L G + Sbjct: 259 PILALLPVIFYVFSVDTTTTAVIFLIWC-IIVSGSDAILKPMLLSRGSNIPMLVILLGAL 317 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GG+ G++GLF+G V+++L ++ + + + + Sbjct: 318 GGMAMSGIVGLFVGAVVLSLTYQLFTVWLDSESKEE 353 >gi|150402189|ref|YP_001329483.1| hypothetical protein MmarC7_0262 [Methanococcus maripaludis C7] gi|150033219|gb|ABR65332.1| protein of unknown function UPF0118 [Methanococcus maripaludis C7] Length = 334 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 137/347 (39%), Gaps = 23/347 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R I+F Y L F + A+ + + + P+Y K + + Sbjct: 9 LARGFIIFSFFALSYMLWPFIGIIALAVAVAYMTKPLYDVLRPKFGK------TYGAIIC 62 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++P L L ++ + + + N P +++ + P Sbjct: 63 LLGIVIPSLLLVILVAEDVVTFLLSLDIENIISKVTP----------ILNDMGYLRVDGP 112 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + K +S+ + + + A+ + ++F+ F+F +DG + Sbjct: 113 EVSKPVSDIW---SLSKPLLDSAATQISAIPSLLMKLLFLSFMTFYFLKDGDRMQDSFML 169 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K + K +++ F+G + ++ G + YWL G+P+ + LG ++ I Sbjct: 170 YVPTEKKENAKIFLNEIHKALKTLFIGNAVTSVIVGFISIIGYWLIGIPNPITLGALSGI 229 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLP 308 + ++P G + ++IY L+ G I L L+G I L + D +RP ++ L Sbjct: 230 LNILPVVGGWTIYVPLTIYYLLTGEIVKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLH 289 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G G+ GL IGP+++A + I K + EN+EK Sbjct: 290 PAFVLIAFLIGPLVFGIPGLAIGPIIVATVYAIHK--VRKSIENREK 334 >gi|311280807|ref|YP_003943038.1| hypothetical protein Entcl_3510 [Enterobacter cloacae SCF1] gi|308750002|gb|ADO49754.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 369 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 128/347 (36%), Gaps = 8/347 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + F +L A+I+ T +P+ F ++ + + + + + L Sbjct: 26 LILALASFCFTVFSPFLNMMLWAIILAVTLYPLQQYFAARLGGKQGWASTLLVLLGILLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + P + + + L+ K+ + P ++ IP G LW K L Sbjct: 86 VAPTIAMVSSLGESVSALIDKMGSGSLVIPPPSESIASIPVVGGKLHALWLKASVDLPGL 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T L + AS G L + +S I I + + G + + + Sbjct: 146 ISAYRTQLGDVAKQVLSVLAS-MGGGLLGFVVSFIVAGIMMAW----GAAGANSARRIAM 200 Query: 194 HLFPAY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + ++ IR+ G+ +A+ + L+ G LAG+P+ ++ I+ Sbjct: 201 RLTDENKGVALIKLCTSTIRAVAQGVIGVALIQALLAGVVMALAGIPAVGIFFILALILG 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + + + G+ ++ + + D L+P ++G + P Sbjct: 261 IAQIPVILVTAPAIAIMWHMGDHGTGLNIIYTVLLLIAGMADNVLKPLMLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G+LG+FIG L+++ I+ + N + Sbjct: 321 VLLGALGGMAASGILGMFIGATLLSIGYRIFMAWVNEGLANASSGND 367 >gi|149371682|ref|ZP_01891098.1| hypothetical protein SCB49_09765 [unidentified eubacterium SCB49] gi|149355309|gb|EDM43869.1| hypothetical protein SCB49_09765 [unidentified eubacterium SCB49] Length = 346 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 131/345 (37%), Gaps = 23/345 (6%) Query: 14 WMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ +++ SL F + + + VL A+ I P + I + +S+ A++ + Sbjct: 17 ILLIILLMGSLIFREMLPYLSGVLGAVTIYVLLRPWMNKLIKR-GWNSSIAAIMLMLVSF 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++P+ + ++ + V G W +L S Sbjct: 76 LGILLPITGILLMLGNKIGDAVKNSERVTLAFKDQ--------VGKWEDKLGMNLHSQID 127 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I ++ F + +SI M LF+ + + Q L Sbjct: 128 VDSI----------SKWVTENLEGFAGGTFNIFISIGIMYFLLFYLFVGNRTFKQSLFEY 177 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + K I + + +RS LG+ ++AI +G++ + + GV VI + Sbjct: 178 IP-INKDNLKTIGKEINSTVRSNALGIPLVAIAQGIIALIGFLIFGVEDPFFWFVIVTVG 236 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +MIP G + V I L G+ F A + +G + + D +R +++ + L Sbjct: 237 SMIPFIGTFVGILPVFILTLSSGSAFQAWGILAYGIVVVGSTDNIIRLYVLKRLDDVHPL 296 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 T G++ GV G +GL GP+L++L V + E+ Sbjct: 297 ITLIGVIVGVPLFGFIGLVFGPLLISLFIVTVRIYRKEFGRKVEE 341 >gi|26987450|ref|NP_742875.1| permease [Pseudomonas putida KT2440] gi|24982112|gb|AAN66339.1|AE016262_7 transporter, PerM family [Pseudomonas putida KT2440] Length = 365 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 139/344 (40%), Gaps = 7/344 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I ++ +++ + + F +L A+I+ T +P++ + + A + Sbjct: 15 LLDVLIKAGLVAALVIFAFQVFQPFLELMLWAVILAVTLYPLHCRIQHRTGLKQGYAATL 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + V+ L +VP+ + + LV+ + P ++ P G LW Sbjct: 75 VVLLVLVLLLVPIYLVVMSIGESVDSLVTLLKSGAWSVPVPPDSVAAWPLIGPKVHALWL 134 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ +K G+ + AS G L + +II + + F G Sbjct: 135 AASENMASVLNQWMPQIKGAGLTVLGAAASAGGAFLL-FIGAIIISGVIMAF----GERG 189 Query: 185 SQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + K ++ + IR+ G+ IA + L++G + + GVP Sbjct: 190 EIATQRIAMRVSGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVVKGVPGAGM 249 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++ ++ + A + V IY+ AT +F + D L+P L+G Sbjct: 250 LAIVILMLGIAQAPATLVTLPVIIYVFNAEGFTVATIIFAIYTFVAGLADNVLKPLLLGR 309 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + +P G +GG+ G++GLFIGPV++ + V++ + + Sbjct: 310 GVDVPMPVVLIGALGGMVVKGIIGLFIGPVILGVTYVLFWQWVA 353 >gi|212693909|ref|ZP_03302037.1| hypothetical protein BACDOR_03431 [Bacteroides dorei DSM 17855] gi|237708530|ref|ZP_04539011.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724003|ref|ZP_04554484.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265751306|ref|ZP_06087369.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663441|gb|EEB24015.1| hypothetical protein BACDOR_03431 [Bacteroides dorei DSM 17855] gi|229437667|gb|EEO47744.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457459|gb|EEO63180.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263238202|gb|EEZ23652.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 333 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 126/329 (38%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + L+ + F +L A I +K + A++ + + Sbjct: 14 TIILGLGLILFIKMSPFMGGILGACTIYIMVRKQMFYLTQEKHFKKSITAILLLIEAIMC 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VPL + + +++ + + WL G + Sbjct: 74 FLVPLSLAVWLLINKLQTVNVDTTGFIHTVTNLADWLHTKTGYDLLN------------- 120 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ +P + ++ ++ L+F G + + + L Sbjct: 121 -----AENISSIASILPAIGQFLMGSISSFAVNAFVLVFVLYFMLIGGIQMEKYIYELLP 175 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T + Sbjct: 176 -FSDTNKKNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATV 234 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ YL + G+ +A L L+ + + +D +R L L T Sbjct: 235 IPIVGTALVWFPLAAYLALSGDWTHAIGLLLYCGLIVTNIDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG+V G+ G +G+ GP+L+++ + Sbjct: 295 IFGVVIGLSLFGFMGVIFGPLLLSIFILC 323 >gi|159906021|ref|YP_001549683.1| hypothetical protein MmarC6_1639 [Methanococcus maripaludis C6] gi|159887514|gb|ABX02451.1| protein of unknown function UPF0118 [Methanococcus maripaludis C6] Length = 334 Score = 143 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 131/335 (39%), Gaps = 21/335 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R I+F Y L F + A+ + + + P+Y K S V Sbjct: 9 LARGFIIFSFFALCYMLWPFIGIIALAVAVAYMTKPLYDVLKPKLGRSYGA------VFC 62 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++P L L ++ + V + + P +++ + P Sbjct: 63 LLGIVIPSLLLAILVAEDVIAFLLSVDIDSIISKVTP----------ILNDIGYLRVDGP 112 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + K +S+ + + + A++ + ++F+ F+F +DG I Sbjct: 113 EVSKPVSDIW--SVSKPLLDSLATQI-SAIPSLLMKLLFLSFMTFYFLKDGDKIKNSFML 169 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K +++ F+G + ++ G + YWL G+P+ + LG ++ I Sbjct: 170 YVPKEKQKNAEIFVNEIHKALKTLFIGNAVTSLIVGFISIIGYWLIGIPNPITLGALSGI 229 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLP 308 + ++P G + +++Y L+ G I L +G + L + D +RP ++ L Sbjct: 230 LNILPVVGGWTIYVPLTVYYLLTGEIVKGVLLGFFGIVFLSLAPDFAIRPRVISKDGDLH 289 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G+ GL IGP+++A + I K Sbjct: 290 PALVLIAFLIGPLVFGIPGLAIGPIIVATVYAIHK 324 >gi|298374135|ref|ZP_06984093.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|298268503|gb|EFI10158.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] Length = 337 Score = 143 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 128/339 (37%), Gaps = 20/339 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + ++ + + F +L A I K F A++ + Sbjct: 17 TIILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILC 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + + + + + G + + + G Sbjct: 77 FLIPITSAIWLVINKTQNINLDPTVLLNTGQHIADLVQEKTGFDVLDR------------ 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +P+ + ++++ +I L+F G + L +L Sbjct: 125 ------GNLLKAASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFP 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I + Sbjct: 179 -FSDQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATI 237 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 238 IPIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLIT 297 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 FG+V G+ G +G+ GP+L++L + + + Sbjct: 298 VFGVVIGLSLFGFMGIIFGPLLVSLFLLCIDIFKKSYLD 336 >gi|150004610|ref|YP_001299354.1| putative transmembrane protein [Bacteroides vulgatus ATCC 8482] gi|294776726|ref|ZP_06742190.1| putative membrane protein [Bacteroides vulgatus PC510] gi|149933034|gb|ABR39732.1| putative transmembrane protein [Bacteroides vulgatus ATCC 8482] gi|294449381|gb|EFG17917.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 333 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 128/329 (38%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + L+ + F +L A I +K + A++ + + Sbjct: 14 TIILGLGLILFIKMSPFIGGILGACTIYIMVRKQMFYLTQEKHFKKSITAILLLIEAIMC 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VPL + + +++ + + WL H ++ Sbjct: 74 FLVPLSLAVWLLINKLQTVNVDTTGFIHTVTNLADWL------------------HTKTG 115 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L ++ +P + ++ ++ L+F G + + + L Sbjct: 116 YDLLSAENISSIASILPAIGQFLMGSISSFAVNAFVLVFILYFMLIGGIQMEKYIYELLP 175 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T + Sbjct: 176 -FSDTNKKNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATV 234 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ YL + G+ +A L L+ + + +D +R L L T Sbjct: 235 IPIVGTALVWFPLAAYLALSGDWTHAVGLLLYCGLIVTNIDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG+V G+ G +G+ GP+L+++ + Sbjct: 295 IFGVVIGLSLFGFMGVIFGPLLLSIFILC 323 >gi|306783812|ref|ZP_07422134.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308331376|gb|EFP20227.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] Length = 385 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 128/351 (36%), Gaps = 7/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L + + + + +L YFL+ +F ++ A + + P++ F + ++ Sbjct: 4 EFTLTQKRALAILTLIALLFGAYFLRNYFVLIVVAAVGAYLFTPLFKWFTKRF--NTGLS 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWAS 120 A +S + +VP+ L ++++ +V V + + G++ Sbjct: 62 AACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDKILQFVNGLFDR 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + +L+ + + G + F S I + + Sbjct: 122 VPFLHITVTADALRKAMISVAQNVGEWLLH-FLRDAAGSLAGVITSAIIFVYVFVALLVN 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L + + ++R T G +IA +G+ ++ ++AG Sbjct: 181 REKLRTLIGQLNL-LGEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFHH 239 Query: 241 HVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++ +++IP G I I ++ GNI + LW + + +D LRP Sbjct: 240 GFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNIDNVLRPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV +L + G+ G G+ IGPVLM LI + K Sbjct: 300 LVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|254883091|ref|ZP_05255801.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643611|ref|ZP_07998231.1| transmembrane protein [Bacteroides sp. 3_1_40A] gi|254835884|gb|EET16193.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384780|gb|EFV65739.1| transmembrane protein [Bacteroides sp. 3_1_40A] Length = 333 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 128/329 (38%), Gaps = 20/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + L+ + F +L A I +K + A++ + + Sbjct: 14 TIILGLGLILFIKMSPFMGGILGACTIYIMVRKQMFYLTQEKHFKKSITAILLLIEAIMC 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VPL + + +++ + + WL H ++ Sbjct: 74 FLVPLSLAVWLLINKLQTVNVDTTGFIHTVTNLADWL------------------HTKTG 115 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L ++ +P + ++ ++ L+F G + + + L Sbjct: 116 YDLLSAENISSIASILPAIGQFLMGSISSFAVNAFVLVFILYFMLIGGIQMEKYIYELLP 175 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T + Sbjct: 176 -FSDTNKKNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATV 234 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ YL + G+ +A L L+ + + +D +R L L T Sbjct: 235 IPIVGTALVWFPLAAYLALSGDWTHAVGLLLYCGLIVTNIDNLIRFILQKKMADTHPLIT 294 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FG+V G+ G +G+ GP+L+++ + Sbjct: 295 IFGVVIGLSLFGFMGVIFGPLLLSIFILC 323 >gi|120437128|ref|YP_862814.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117579278|emb|CAL67747.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 339 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 130/330 (39%), Gaps = 21/330 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + + VL A+ + +++ A + ++P+ + Sbjct: 30 LPYLSGVLGAVTLYVILKSWMKKLVNR-GWRPPLAASLLMAGSFVGILIPVTLIAIMLTS 88 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + V+ + + L++I + +S + ++ + Sbjct: 89 KIGKAVANSERVLK---ALKDQLNNI---------------EAEIGFSISSSIDTSSITN 130 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ + ++I M L++ + S+ + + L + I Sbjct: 131 WVSSNLQNLAGGTFNAFIAIGIMYFMLYYMLTNRESLRDSMITYIP-LGKDNLRIIGEES 189 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 ++++S LG+ ++A+ +G++ + + GVP VITAI +MIP G I Sbjct: 190 NQLVKSNALGIPLVALVQGIIALIGFLIFGVPDPFFWFVITAIGSMIPFIGTAIGILPAC 249 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I L +GN F A L ++G + + D +R +++ + L T FG++ GV G + Sbjct: 250 ILLFAQGNDFQAISLLIYGFVVVGSTDNIIRLYVLEKLASVHPLITLFGVIVGVPLFGFI 309 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GL GP+L++L +I K + ++ Sbjct: 310 GLIFGPLLVSLFLLILKIYKKEYGNSHHRL 339 >gi|256838584|ref|ZP_05544094.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739503|gb|EEU52827.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 337 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 120/320 (37%), Gaps = 20/320 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + ++ + + F +L A I K F A++ + Sbjct: 17 TIILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILC 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + + + + + G + + + G Sbjct: 77 FLIPITLAIWLVINKTQNINLDPTVLLNTGQHIADLVQEKTGFDVLDR------------ 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +P+ + ++++ +I L+F G + L +L Sbjct: 125 ------GNLIKAASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFP 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I + Sbjct: 179 -FSDQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATI 237 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 238 IPIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLIT 297 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 298 VFGVVIGLSLFGFMGIIFGP 317 >gi|262382952|ref|ZP_06076089.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301307733|ref|ZP_07213690.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|262295830|gb|EEY83761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300834407|gb|EFK65020.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 337 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 120/320 (37%), Gaps = 20/320 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + ++ + + F +L A I K F A++ + Sbjct: 17 TIILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILC 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + + + + + G + + + G Sbjct: 77 FLIPITLAIWLVINKTQNINLDPTVLLNTGQHIADLVQEKTGFDVLDR------------ 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +P+ + ++++ +I L+F G + L +L Sbjct: 125 ------GNLLKAASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFP 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I + Sbjct: 179 -FSDQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATI 237 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 238 IPIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLIT 297 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 298 VFGVVIGLSLFGFMGIIFGP 317 >gi|313206604|ref|YP_004045781.1| hypothetical protein Riean_1114 [Riemerella anatipestifer DSM 15868] gi|312445920|gb|ADQ82275.1| protein of unknown function UPF0118 [Riemerella anatipestifer DSM 15868] gi|315022099|gb|EFT35128.1| hypothetical protein RAYM_06367 [Riemerella anatipestifer RA-YM] gi|325335954|gb|ADZ12228.1| protein of unknown function UPF0118 [Riemerella anatipestifer RA-GD] Length = 373 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 140/342 (40%), Gaps = 26/342 (7%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L+ Y L F +L A+ + S I KK A++ ++ + + I+ Sbjct: 26 VTLFLLMAYQLAMFLPSLLGAITLYVISRKYNLYLIEKKNWKPWVSALVIMLATVVILIL 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 PL FL + ++ + + N + ++ L + Sbjct: 86 PLYFLIDTLIEKLGNAQAYMGRFNDFLDKIHSYI----------------------LSEI 123 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLS---IIFMIIALFFFYRDGFSISQQLDSLGE 193 L +D + A + L L+ II L +F I +++ + Sbjct: 124 QIDILSKENLDKVKETAGQLSTTILSSTLNTVTIIVSTYFLLYFMLVKPRIFERILTNAA 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L IS + K+I + +G+ ++A G+GL Y + G PS + L +T I +M Sbjct: 184 PLKRTNINLISEKIRKMIIANAIGIPVVAFGQGLAALVGYLIFGAPSVILLFALTTIASM 243 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+++++ +G+ + L ++ + + ++D LR L+ + L T Sbjct: 244 IPIVGGALIYVPVALFMIAEGDTVSGVGLAIYCLVVVGLIDNVLRFTLLKKLEDIHPLNT 303 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FG++ G+ G +GL GP+L+++ ++ + + Sbjct: 304 VFGIILGMNLFGFMGLVFGPILVSVTLLLIQIYRDEFSDEDN 345 >gi|86145809|ref|ZP_01064138.1| hypothetical membrane spanning protein [Vibrio sp. MED222] gi|85836508|gb|EAQ54637.1| hypothetical membrane spanning protein [Vibrio sp. MED222] Length = 366 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 131/343 (38%), Gaps = 7/343 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ L+ F V+ II +P+ + +K S + + + + L ++P Sbjct: 23 MLVYWCFAILRPFILLVIWGAIIATALYPVAVAISNKTGMSKGKASALLSFIGVLLLLIP 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 L+ L +L++ + L DIP G S+ + + I Sbjct: 83 LVALSSGIYTSASDLMTGLQDGTLSLPKPKESLQDIPLVGERVYAALVHASSNIEGVFIT 142 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 LK + G F+ + +S I F + + L L Sbjct: 143 YADELKVFASK-MASILGSLGGGFVQFIISTIIAGA----FMSNADKCQTGVTHLVVRLT 197 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 198 DGKGVELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAALWALAVLLVAIIQL 257 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ IY+ + A+ +W I + D L+P L+ +P L G Sbjct: 258 PPILALLPAIIYMFSVESTLAASLFLVWC-ILVSGSDAILKPVLLSRGSHIPMLVILLGA 316 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ G++GLF+G V+++L + + ++N+++ Sbjct: 317 LGGMAMSGIVGLFVGAVILSLSYELMMAWLGLEEKNQQETEKK 359 >gi|220904315|ref|YP_002479627.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868614|gb|ACL48949.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 368 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 71/374 (18%), Positives = 138/374 (36%), Gaps = 39/374 (10%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------------- 54 Q + R + + +L L + A + + P Y K Sbjct: 3 QTMPRLLYLLAVLAWYLLLLPNPVTIFMAACLSCLTLPQYRKLRQKARAWRIRIERSRPD 62 Query: 55 KEESSTFLAVIA-------TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + ++ + ++ IVP+ L + +++ + +P Sbjct: 63 SRKRRLLISFVNSSPLYGYITMLIAALIVPIAVLVLLVSPQAAAGFTRLRELQANNFQLP 122 Query: 108 --------RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 +W + + L S + L + G+DF+ + Sbjct: 123 VEWVNYIQQWRQSLTEHPRLERAFNDLLMRLDSFFDTAMGLLLSRGVDFLGGTMTVLWTS 182 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 FL L++IF I + +++ H+ + ++ + + +R LG+ Sbjct: 183 FLFVSLTVIFTIYS---------RRVRKITGRIFHISQSMLRRFITAIHRALRGIMLGIV 233 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 ++A+ +G + G A+ +AGV G++ ++A IP G + + + I L G A Sbjct: 234 LVALAQGFLCGVAFAVAGVNQPAFWGLLATLVAPIPMVGTALVWLPLCISLWFTGKSMAA 293 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L LWG + + VD LRP + IK PF ++ G+ + G +GL GPVL+A Sbjct: 294 IGLGLWGMLAVAGVDNVLRPLFLRQGIKAPFFVLIIAILCGLSSFGPVGLIAGPVLLAFA 353 Query: 339 AVIWKESIMAIKEN 352 +E+ K N Sbjct: 354 MQAVEEANRIYKYN 367 >gi|172040300|ref|YP_001800014.1| permease [Corynebacterium urealyticum DSM 7109] gi|171851604|emb|CAQ04580.1| transporter of the putative permease family [Corynebacterium urealyticum DSM 7109] Length = 551 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 114/335 (34%), Gaps = 19/335 (5%) Query: 16 IMFIILVSLYFLKGF------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ I L + K F PVL ALI+ WP+ K + + Sbjct: 161 LLIIALAAFVASKAFGKLWVGILPVLLALIVCTVLWPVVRVLREKLHFPNALAVATTIIG 220 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L + + + +EL S+ + + RWL P + S+ Sbjct: 221 FFVLIAGLFALIIPPAVDQSRELASQANAGIRT---IQRWLQGPPVNLQESQFNDALNQA 277 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ N I + L +++ M++ FFF +DG + Sbjct: 278 TSWLQ---------NQSGRIASEVAAGASATLSALMTLFIMLVLTFFFLKDGEKFLPMIR 328 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + + +++ + + +G +L GVP L V+T Sbjct: 329 RITGRRVGWHLTEALTRCWQTLGGFIRTQALVSFIDAVFIGGGLFLMGVPLAGPLAVLTF 388 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLP 308 IP +S+ + + G F L + + ++ L P+L + L Sbjct: 389 FAGFIPIVGATVAGVLSVLIALVGVGFKTAIFTLILVLAVQQLEGNVLSPWLQAKAMDLH 448 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G G++G F+ A+IAV+ + Sbjct: 449 PVIVLLAVTLGGTLFGIIGAFLAVPAAAMIAVVLR 483 >gi|300775462|ref|ZP_07085324.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506202|gb|EFK37338.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 359 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 139/354 (39%), Gaps = 20/354 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + +I+ + + + L F VL A+ I +K+ + A Sbjct: 14 KQVSLLAIILVLTGLICFNLALFIPSVLGAITIYVVCRKYNFYLQEEKKWKPSLAAFALM 73 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+P+ F+ + ++ + + N + ++ D G S+ Sbjct: 74 FASLIVLILPIYFIADLIIDKLGNAQAYMAKFNIFLDKIHTYIFDKVGFDILSKE----- 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 T D + + ++ + ++ M L+F + ++ Sbjct: 129 -------------NMTKLKDSVGKISTSALSGTFNTLTVVMSMYFILYFMLEK-PRLFER 174 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S L A I + K+I + +G+ ++A+G+G+V Y + G P V L + Sbjct: 175 ILSNAAPLKRANISLIGDKMRKLIMANAIGIPVVAVGQGIVSLIGYIIFGAPGPVLLFAL 234 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA ++IP G I + V I+++ +GN L + + + + D LR L+ Sbjct: 235 TAASSVIPVVGTAIVYVPVCIFMIAEGNTGPGLGLAAYCVVVVGLTDNLLRFTLLKKLEN 294 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + L T FG++ G+ G +GL GP+L++L ++ + + + Sbjct: 295 IHPLNTVFGIIMGMNLFGFMGLIFGPILISLTLLLIQVYRNEFSDEETPPDLEL 348 >gi|150009736|ref|YP_001304479.1| hypothetical protein BDI_3151 [Parabacteroides distasonis ATCC 8503] gi|255012973|ref|ZP_05285099.1| hypothetical protein B2_03653 [Bacteroides sp. 2_1_7] gi|149938160|gb|ABR44857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 337 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 122/320 (38%), Gaps = 20/320 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + ++ + + F +L A I K F A++ + Sbjct: 17 TIILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILC 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + + + + + G + + + G ++ Sbjct: 77 FLIPITLAIWLVINKTQNINLDPTVLLNTGQHIADLVQEKTGFDVLDRGNLLKVA----- 131 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +P+ + ++++ +I L+F G + L +L Sbjct: 132 -------------SILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFP 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I + Sbjct: 179 -FSDQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATI 237 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 238 IPIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLIT 297 Query: 313 FFGLVGGVRTMGLLGLFIGP 332 FG+V G+ G +G+ GP Sbjct: 298 VFGVVIGLSLFGFMGIIFGP 317 >gi|84385148|ref|ZP_00988180.1| hypothetical membrane spanning protein [Vibrio splendidus 12B01] gi|84379745|gb|EAP96596.1| hypothetical membrane spanning protein [Vibrio splendidus 12B01] Length = 366 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 131/343 (38%), Gaps = 7/343 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ L+ F V+ II +P+ + +K S + + + + L ++P Sbjct: 23 MLVYWCFSILRPFILLVIWGAIIATALYPVAVAISNKTGMSKGKASALLSFIGVLLLLIP 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 L+ L +L++ + L DIP G S+ + + I Sbjct: 83 LVALSSGIYTSASDLMTGLQDGTLSLPKPKESLQDIPLVGERVYAALVHASSNIEGVFIT 142 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 LK + G F+ + +S I F + + L L Sbjct: 143 YADELKVFASK-MASILGSLGGGFVQFIISTIIAGA----FMSNADKCQTGVTHLVVRLT 197 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 198 DGKGVELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAALWALAVLLVAIIQL 257 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ IY+ + A+ +W I + D L+P L+ +P L G Sbjct: 258 PPILALLPAIIYMFSVESTLAASLFLVWC-ILVSGSDAILKPVLLSRGSHIPMLVILLGA 316 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GG+ G++GLF+G V+++L + + ++N+++ Sbjct: 317 LGGMAMSGIVGLFVGAVILSLSYELMMAWLGLEEKNQQETEKK 359 >gi|198276942|ref|ZP_03209473.1| hypothetical protein BACPLE_03147 [Bacteroides plebeius DSM 17135] gi|198270467|gb|EDY94737.1| hypothetical protein BACPLE_03147 [Bacteroides plebeius DSM 17135] Length = 338 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 127/326 (38%), Gaps = 33/326 (10%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+FI+ + + F +L + + +K + T+ V Sbjct: 10 LIVFILGLGYLLFRQAQPFLNGILGGFTLYLLLRNVTFWLQTKM--KPALAVWLVTIGVT 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++PL + + ++ ++ + V ++ D G SE Sbjct: 68 LFILIPLSLFGWALVSQVSKMHFDTEAIIRPAWHVIDFIKDRTGFDILSE---------- 117 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 + F AS G + D +++ I+ LFF +G S+ Sbjct: 118 ------------KSLSFFVSQASSIGQSVMSGVSDLLVNLCVAIMLLFFMLYEGKSMEHY 165 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +L ++ + V ++RS +G+ ++AI +G + Y + P+ ++ Sbjct: 166 VSTLLP-FKAENKIEVLKKVQLMVRSNAIGIPLLAIIQGFISLGGYLICDAPNPFLSAML 224 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA ++IP G + + ++IY LI G+ NA + +GAI + D +R L Sbjct: 225 TAFASVIPLVGTALVWVPITIYFLIVGSWVNALMMLGYGAIIVSQCDNLIRFLLQKKMAD 284 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + L T FG+V G+ G +G+ GP Sbjct: 285 VHPLITIFGVVAGLPLFGFMGVIFGP 310 >gi|68536533|ref|YP_251238.1| hypothetical protein jk1447 [Corynebacterium jeikeium K411] gi|68264132|emb|CAI37620.1| putative membrane protein [Corynebacterium jeikeium K411] Length = 608 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 125/340 (36%), Gaps = 24/340 (7%) Query: 14 WMIMFIILVSLYFLKGF---------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 W + FII+ + +L GF PV ++I+ WP+ + K + ++ + Sbjct: 174 WCLRFIIIAAALYL-GFQVFGKLWAGILPVCLSVIVCTVLWPV-VRLLRKAKIPNSLAVL 231 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + L I + + + K +V++ + WL P + S+ Sbjct: 232 ISILGFFALIIGTFAAIAPSAVDQGKTIVNQASDGIGR---IQDWLQGPPVNLQESQF-- 286 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +L+ D I + FG +++ M++ FFF +DG + Sbjct: 287 ------NDGVQQITDWLQNKSGD-IATSIAAFGTETASLLVTLFVMLVLTFFFLKDGENF 339 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + + ++ + I++ + + +G L VP L Sbjct: 340 LPMLRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPL 399 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 ++T IP A+S+ + + FN + L + + ++ L+P L Sbjct: 400 AILTFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSR 459 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + + G G++G F+ A+IAVI + Sbjct: 460 AMNVHPVIILLSVTLGSTLFGIIGAFLAVPCAAMIAVILR 499 >gi|300870109|ref|YP_003784980.1| hypothetical protein BP951000_0476 [Brachyspira pilosicoli 95/1000] gi|300687808|gb|ADK30479.1| putative exported protein [Brachyspira pilosicoli 95/1000] Length = 394 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 22/352 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------ST 60 Q I I + LK F + AL+ P++ I K Sbjct: 8 QIFFITFIFLSIFIMYQLLKPFGMVIFFALVFYVVLSPLFKKAIGKSYGKEDKISMIKRH 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL----VSKVVLANQHGIPVPRWLSDIPGG 116 LA++ +++ + +F+VP L Y ++++ ++ + + + + I L ++ Sbjct: 68 TLALLFSLTSLIIFLVPTSLLLYTIIVQLIDISNIGIKYFMNLDFNSILNNDRLRELLSM 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + +S + L+ + ++ L T+ ++ + + + S IFM+ +L Sbjct: 128 LPVE------ISAAEILRRIQDSLLSNLTSVSSYLTQNVAGILKGTGKFVSSFIFMMFSL 181 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FFF+ DG + +Q+ SL + Y ++ + + IR G I +G+ Y Sbjct: 182 FFFFVDGEYLKEQVSSLIP-IEKKYLDRLFKQASEGIRGIIFGNLFTGIFQGICAFIVYS 240 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + GV + + ++T I + +P G I + + + +I G I A + + I D Sbjct: 241 IFGVTNSLTFALLTIIASFMPIIGTTIIWIPLGVLFIINGEILRAIIFLVVSWFFITIPD 300 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +RP L+G I+L L FF ++GGV GL G+ +GP+ L I + Sbjct: 301 NFVRPLLLGNRIELHPLFIFFAILGGVLFFGLSGIILGPLTFILFFEIMRMY 352 >gi|189462559|ref|ZP_03011344.1| hypothetical protein BACCOP_03249 [Bacteroides coprocola DSM 17136] gi|189430720|gb|EDU99704.1| hypothetical protein BACCOP_03249 [Bacteroides coprocola DSM 17136] Length = 338 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 118/310 (38%), Gaps = 30/310 (9%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + F +L + + +K + T+ V ++P+ + + Sbjct: 26 QPFMNGILGGFTLYILLRNFSNWLQTKI--KPLLAVWMITIGVTLFILIPVSLFSWAIVS 83 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + Q V + + G SE + Sbjct: 84 QISGMHFDTQAIIQPAHQVIDIIEERTGFDLLSE----------------------KSLS 121 Query: 148 FIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 F+ AS G + D +++ I+ +FF +G + + ++ + +++ Sbjct: 122 FMVVQASSIGQKIMTGVSDLIVNLAVAIMLMFFMLWEGRKMEHYVSTIMP-FEESNKREV 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + ++RS +G+ ++A+ +G++ Y L P+ ++TA ++IP G + + Sbjct: 181 LNKIQLMVRSNAIGIPLLAVIQGIISLGGYLLCDAPNPYLTALLTAFASIIPLVGTALIW 240 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 VSIY LI G NA L +G I + D +R L + L T FG+V G+ Sbjct: 241 IPVSIYFLIMGEWINALILLGYGGIIISQCDNLIRFLLQKKMANIHPLITIFGVVAGLPI 300 Query: 323 MGLLGLFIGP 332 G +G+ GP Sbjct: 301 FGFMGIIFGP 310 >gi|198283230|ref|YP_002219551.1| hypothetical protein Lferr_1102 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666938|ref|YP_002425462.1| hypothetical protein AFE_0988 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247751|gb|ACH83344.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519151|gb|ACK79737.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 346 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 140/341 (41%), Gaps = 12/341 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ + + Y L F P+L ++ WP +++ + + + Sbjct: 17 FVLLLVYAGAAYTLSPFAGPLLMGAVLTTVGWPWQLRLERAFHMPRWLGSLVHALVWVAI 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+P + + + ++ L+S+ + P + G W LSH + L Sbjct: 77 IIIPAVIIVDSVLPQLALLISRWQSGGPLVVVPPEVMKIPYVGHWL-------LSHLRGL 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + I S+ + L F + +F G +++ L Sbjct: 130 NGAYLSALVSTHSGIITDSLSQLWIFTLH----TFFAALTVFALALHGERLTEALRLGAG 185 Query: 194 HLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ ++ RS +G+ + + EG+ +G AY +AG+ V TA+++ Sbjct: 186 QIWGSDRGDRLLAASRDAARSVLIGLIGVGVVEGMFIGIAYAVAGLGMWPLWLVATALIS 245 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP GA A +++L G+ F + +WG I + D +RP L G + PF Sbjct: 246 PIPFGATAVVGAATLWLAFTGHWFAGLLVLIWGLIVITAADLVVRPLLTGSQTQAPFFLV 305 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FF ++GG GL+GL IGP+L+ L +W+ ++ + Sbjct: 306 FFSILGGAEAFGLIGLIIGPILVLLARGVWRAWERRVRLQE 346 >gi|222480361|ref|YP_002566598.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222453263|gb|ACM57528.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 346 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 139/356 (39%), Gaps = 32/356 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST---- 60 M Q + +I + L++L+ ++ F V+++ I+ + +P + +E + Sbjct: 1 MNRGQSFLLLLIGSVALLTLFVIRPFIEYVIASAILAYVLFPFHVRLSRGLQEGLSNRFR 60 Query: 61 ----------FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 A+ VS + I+PL ++ + + ++ E+ + I Sbjct: 61 ESLARQLGYMLSALFLIVSSIVAVILPLAYISWVFVRDLTEIARGNSDIDVEAI------ 114 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 E L+ Q T + + + L + + Sbjct: 115 ----------ETELAALTGEQIEVGEVLTTVGQVLANTLFGGLGGIVTTALRASVGLSLA 164 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + +++ DG + + L L + V + R +G ++A+ + LV G Sbjct: 165 LFLVYYTLLDGPAFVRWLRQTSP-LPADVTSDLVDRVDAMTRGVVIGHIVVALLQALVAG 223 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 W AG+P+ V + A++A++P GA + + YL+ + L ++G + + Sbjct: 224 LGLWAAGIPNVVFWTFVMAVLALVPLVGAFFVWGPAAAYLVAIDQVTAGVFLAIYGVLVI 283 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +VD RP ++ L G+ GG+ ++G GLF+GP+++ ++A + Sbjct: 284 AMVDNYARPIVIDQQAHLNPAVILLGVFGGIYSIGFTGLFVGPIVIGVLAATLETF 339 >gi|260577670|ref|ZP_05845606.1| membrane protein [Corynebacterium jeikeium ATCC 43734] gi|258604216|gb|EEW17457.1| membrane protein [Corynebacterium jeikeium ATCC 43734] Length = 605 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 125/340 (36%), Gaps = 24/340 (7%) Query: 14 WMIMFIILVSLYFLKGF---------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 W + FII+ + +L GF PV ++I+ WP+ + K + ++ + Sbjct: 171 WCLRFIIIAAALYL-GFQVFGKLWAGILPVCLSVIVCTVLWPV-VRLLRKLKIPNSLAVL 228 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + L I + + + K +V++ + WL P + S+ Sbjct: 229 ISILGFFALIIGTFAAIAPSAVDQGKTIVNQASDGIGR---IQDWLQGPPVNLQESQF-- 283 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +L+ D I + FG +++ M++ FFF +DG S Sbjct: 284 ------NDGVQQITDWLQNKSGD-IATSIAAFGTETASLLVTLFVMLVLTFFFLKDGESF 336 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + + ++ + I++ + + +G L VP L Sbjct: 337 LPMLRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPL 396 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 ++T IP A+S+ + + FN + L + + ++ L+P L Sbjct: 397 AILTFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSR 456 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + + G G++G F+ A+IAVI + Sbjct: 457 AMNVHPVIILLSVTLGSTLFGIIGAFLAVPCAAMIAVILR 496 >gi|256419838|ref|YP_003120491.1| hypothetical protein Cpin_0792 [Chitinophaga pinensis DSM 2588] gi|256034746|gb|ACU58290.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 344 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 130/358 (36%), Gaps = 24/358 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 ++++ + I + + IIL+ Y L FF L A+ + S + K+ Sbjct: 2 SVIDNERIKQVSFLLIILLLAYVLFKELYTFFPGFLGAVTMYILSRKFMFRLVEKRNWKK 61 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + A + V + ++P L ++ VS + + + Sbjct: 62 SAAAALLMVLSFIIVLLPFGMLINMLTDKIGYAVSHSQEMVAGIEKLNVRIKESTNFDVL 121 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S++ + L ++ + +I + L+F Sbjct: 122 SQVKLERLQ------------------GYLTSVLPTLLGATFNTLTAIAILYFILYFMLV 163 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + L L ++ K++ + +G+ IA+ +G+V Y++ VP Sbjct: 164 NAREMEAWLYEYIP-LKDENVLRLGTEFHKLVIANAVGIPAIALIQGVVSLIGYFIFQVP 222 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 V +T AM+P GA + + +YLL G + + ++G + D R Sbjct: 223 QPVFWFAVTCFTAMLPVVGAAAVYVPMGLYLLGTGMTWQGIGVLVYGFAVVGTSDNIFRF 282 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L T FG++ GV G +GL GP+L+++ ++ + K ++ Sbjct: 283 VLAKRIGDVHPLITVFGVLIGVNLFGFIGLIFGPLLISMFILLLEIYSNEFFTKKREV 340 >gi|153003656|ref|YP_001377981.1| hypothetical protein Anae109_0785 [Anaeromyxobacter sp. Fw109-5] gi|152027229|gb|ABS24997.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 363 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 127/338 (37%), Gaps = 7/338 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 M++ + ++ + F+ A ++ T K A T++V+ Sbjct: 14 MLVVALALTAALVWPFWVAFFLAAVLSATLRRPMEWLARKLRGRREIAAAALTIAVLLAV 73 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++PL + + E+ + V + + L+ +P + + + Sbjct: 74 VLPLAAIGTLIVGEVLDGVQFLRKLFASEG-IGGILARLPDPLEQAARKVVAAIPEPQQQ 132 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I + S G ++ M+IALFF DG + LD Sbjct: 133 IKQIAQQGQQAAGVVATVISATGSAVFQ----VVMMLIALFFMLVDGSRLVGWLDRHVP- 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L P +++ K S A + Y +A P+ V + T ++A++ Sbjct: 188 LRPGLLRELIEDFSKTSVSVLTATLATAGIQTATALVGYLIARAPNLVFFTLATFVVALV 247 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G V + LL G++ T L WGA + ++D RP+L+ G ++L F Sbjct: 248 PALGGAFMVVGVGLLLLATGHVLAGTFLVAWGAAVVSLIDNVARPYLLKGGMELHGGIVF 307 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F L+GG+ T G +GL +GP+++ + + K Sbjct: 308 FALIGGLATFGGIGLVLGPLIVTFLLAVLKMYEREYGR 345 >gi|269793324|ref|YP_003318228.1| hypothetical protein Taci_1732 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100959|gb|ACZ19946.1| protein of unknown function UPF0118 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 355 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 131/340 (38%), Gaps = 12/340 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR M PQ + ++ + L S ++ P+ ++ F + Sbjct: 1 MRRDM-APQWAVGAFVLVLALWSYPVVRSMLEPLGMGAVMAFALSGPKRRLCRR-ANRPA 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + T+ + ++P + Y +E++ + S+ + G L+D + Sbjct: 59 LWASLLTLGFLFSIVIPTAYGVYALGMEVRGIASQGLQGLVRGDMDVAQLADALKARYG- 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL----SIIFMIIALFF 176 L T S L + S L +G+ ++ R + +I+ Sbjct: 118 HLVTHLPSEFGGLDLWS---LGADGLIWLARQGLSMSGNLIGGITRATYTILLSCFFGLL 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D ++ + L L + +V+R+ +G + + +G + +W + Sbjct: 175 ILKDWEALVRALGRTIP-LGGWRARAFLLRSGRVMRAVIVGSVLTGLVQGGLGALGWWFS 233 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P+ G+ + IP G + + + YL + G+I L WGA+ + +D Sbjct: 234 GLPNWATAGLGMFACSFIPVVGTALVWLPGAAYLALTGSIKGGLILAAWGALVVSSIDHL 293 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 +RP + + L G++GG+ G+ GLF+GPV + Sbjct: 294 VRPLFMSSGEEASTLLMMVGVLGGLAAWGVPGLFMGPVAL 333 >gi|55380329|ref|YP_138178.1| hypothetical protein rrnB0307 [Haloarcula marismortui ATCC 43049] gi|55233054|gb|AAV48472.1| unknown [Haloarcula marismortui ATCC 43049] Length = 318 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 116/319 (36%), Gaps = 18/319 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F +L A+++ + +P+ + S A+ + F+ P++ + Sbjct: 2 LIRPFLQYILGAVLLAYVLYPLQIRLETYV--SPMLAALSLVTLAVTGFVAPVVVVLASI 59 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 M ++ + P + E K L+ + + Sbjct: 60 MESADRILREFGTD--------------PVQLDILESRIKGLTGVEVDIAGELVSSGRDI 105 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I +++ + + I + +++ +DG + L L + Sbjct: 106 GTIIVERSTQAFSTITFHLIGIALALFLIYYLLKDGDDLVDWLHRTVP-LPVDVQRDFYA 164 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + V+ G +AI +G+V G GVP+ + + ++AM+P G + Sbjct: 165 EIDDVMLGVLFGHVFVAIVQGIVAGVGLAATGVPNAMFWTAVMVVLAMVPLIGTIPVWGG 224 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 IYL A LFL+ I + + D LRPF V KL G++GG G Sbjct: 225 AVIYLYATDEPLLAVGLFLYSVIIVGLTDDYLRPFAVDRYAKLNPAVILLGILGGAYAFG 284 Query: 325 LLGLFIGPVLMALIAVIWK 343 ++GL GPV++ + + Sbjct: 285 VMGLLFGPVVLGALKAALR 303 >gi|89890618|ref|ZP_01202128.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] gi|89517533|gb|EAS20190.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] Length = 340 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 120/331 (36%), Gaps = 21/331 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + +L A+ + PI SK + + + ++P++ + Sbjct: 30 LAPYLGGLLGAITLYVLLEPIQKWLESK-NWKPSVASSFLIALSFVIILLPIVGIGLM-- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + SKV A + + + + +SE Sbjct: 87 -----MSSKVKTAIDNSTQITETIKS-----------KVAETENLIGVSVSENINTEEVS 130 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 ++ L +SI M L+F D + L K I + Sbjct: 131 SWVSSNVQNLANSSLTVSISIGIMFFLLYFMLVDRKKWLEAALIYMP-LKEKNLKIIGKE 189 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 +++S +G+ ++A+ +G+V Y++ GV + VIT I +MIP G + V Sbjct: 190 SIDLVKSNAIGIPLVALLQGIVALIGYFIFGVENPFFWFVITVIGSMIPFVGTALGILPV 249 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I L +G A + ++G I + D R + + L T G+V GV G Sbjct: 250 TILLFSQGETAAAIGILIYGVIVVGSTDNLFRLVVQKRLADVHPLVTLIGVVVGVPLFGF 309 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL GP+L++L ++ K + E I Sbjct: 310 IGLIFGPLLVSLFLLLLKIYKNEYGKEGETI 340 >gi|91215955|ref|ZP_01252924.1| putative transmembrane protein [Psychroflexus torquis ATCC 700755] gi|91185932|gb|EAS72306.1| putative transmembrane protein [Psychroflexus torquis ATCC 700755] Length = 354 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 123/310 (39%), Gaps = 27/310 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + + +L A+ + + K + TF + V+ L +VP+L + Sbjct: 29 LLPYISGILGAITFYVLLRGLMRWMLHK-GWNPTFSVTVLMVASFILILVPVLGIILMLS 87 Query: 87 LEMKELVSK---VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ + V+ A + + +S I G T Sbjct: 88 SKVSSAIQNSEKVIEAAKAQLVQIETMSGINLGEKIDS---------------------T 126 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D++ + ++I M L++ + ++ +++ + K I Sbjct: 127 AVTDWLSNNLQGLAGGTFEVFIAISIMYFLLYYMLLNQKKLTISMETYIP-IDVENLKLI 185 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 ++ K +++ +G+ ++A+ +G++ YW+ GVP + VIT I +MIP G I F Sbjct: 186 AKESAKKVKANAIGIPLVALFQGIISLIGYWIFGVPEAMFWFVITTIGSMIPFVGTAIGF 245 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V++ L +G +A + L+G + + D +R ++ L T G++ GV Sbjct: 246 IPVTLLLYYQGETASAIGVLLYGFVIVGSSDNIVRLLVLKKMANEHPLITLIGVIIGVPL 305 Query: 323 MGLLGLFIGP 332 G +GL GP Sbjct: 306 FGFIGLIFGP 315 >gi|298209214|ref|YP_003717393.1| putative transmembrane protein [Croceibacter atlanticus HTCC2559] gi|83849141|gb|EAP87010.1| putative transmembrane protein [Croceibacter atlanticus HTCC2559] Length = 339 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 130/330 (39%), Gaps = 23/330 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSF---ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P L ++ T + + + + +K + + + + +VP+ + Sbjct: 29 IIPYLGGVLGAITFYVLLRKWMVILLRKGWNENLASGLLMLGSFVGILVPISLIIIMLTS 88 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + V + + W + + S +I + Sbjct: 89 KIGKAVDNSERVIE-------------AVKTQVDKWELSVGYDLSSQIDTGKI-----AS 130 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ D ++I + L++ + + + LD + I + Sbjct: 131 WVGDNLKNLAGGTFDAFIAIGILYFMLYYMLTNRSQLREALDEYIP-IGHDNLILIGKES 189 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 ++R+ +G+ ++AI +G++ + + GVP VIT I +MIP G I V+ Sbjct: 190 SDLVRANAIGIPLVAICQGIIALIGFLIFGVPDPFFWFVITTIGSMIPFIGTAIGIIPVT 249 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I L +G + A +F++G + + D +R +++ + L T FG+V GV G + Sbjct: 250 ILLYAQGMHWQAIAIFIYGMVVVGATDNFIRLYMLQKLSNVHPLITLFGVVVGVPLFGFI 309 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GL GP+L++L +I K +N+ ++ Sbjct: 310 GLIFGPLLISLFLLIVKIYKNEYGKNEARL 339 >gi|46579600|ref|YP_010408.1| hypothetical protein DVU1189 [Desulfovibrio vulgaris str. Hildenborough] gi|120602912|ref|YP_967312.1| hypothetical protein Dvul_1868 [Desulfovibrio vulgaris DP4] gi|46449015|gb|AAS95667.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563141|gb|ABM28885.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris DP4] Length = 399 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 137/328 (41%), Gaps = 6/328 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F ++ + + + +P Y S E A++ V+ L ++P++ + Sbjct: 47 VAPFLHTIILSSVFSASIYPFYRRLTSYLGERPVPAALLVLAGVVILVVIPVVVFVIGLI 106 Query: 87 LEMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + VS + LA G+ + P W E ++ + Sbjct: 107 PQAVASVSAITRWLAGHGGLDGLNDAALAPYIAWVRENLPFIDPAQLDVRSSLVQASRAA 166 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + ++ + L + +++ +FF +DG + Q++ L L +I Sbjct: 167 G-QTLLQWGTYVLGNTLLLFGHFLLLLLCMFFMLKDGAWMVQRVRYLSP-LRIDQQDRII 224 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 + +V RS +G ++A+ +GL+ G A G+P + G + A +++P G + + Sbjct: 225 LELRRVGRSVLVGGLLVAVIQGLLGGVALAAVGIP-ALFWGTLMAFASLVPVVGTGLVWV 283 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 YLL+ +A L LW I + D LRP+ + G + +P F ++GGV+ Sbjct: 284 PAVCYLLLTSQWESALFLSLWCGIVVVGADSILRPYFMRGGVGMPVFFIFLSILGGVKAF 343 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+LG+ GP++++ V+ ++ Sbjct: 344 GMLGILDGPLILSFTVVMLSLYGDEYRD 371 >gi|120405597|ref|YP_955426.1| hypothetical protein Mvan_4645 [Mycobacterium vanbaalenii PYR-1] gi|119958415|gb|ABM15420.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii PYR-1] Length = 396 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 140/355 (39%), Gaps = 7/355 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + L + + + + + + YFL+ + + + ++ + P+ + +++ S Sbjct: 3 DDFTLTQKRALAVLTVIALAFAAYFLRTYLLLIAISAVLAYLFTPLNNRLLTRMG--SGA 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWA 119 A + ++ + +PL + + L++ ++V+ + + + L D + A Sbjct: 61 AATVTLLAAIATVALPLSGVAFLAFLQISQMVTGISQWVERTDFTALGQRLLDSANQLLA 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + P+S++ T + G +F FA + ++I I Sbjct: 121 RIPFIDTTLTPESVRDALATIGQKAG-EFALGFARDSVGGIVAMVTALILFIYVFLALLT 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + L L V ++ +T G IIA+ +G+ + ++ G+ Sbjct: 180 NGTKVLDLFRDLNP-LGQQVSDIYLAKVGAMVSATVKGQFIIAVCQGVAGAVSVYIGGIH 238 Query: 240 SHVALGVI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + VI +++ IP G I + + + + GN + ++ I + +D LRP Sbjct: 239 DGFFMFVIFLTVLSFIPLGGGIVTIPLGVGMAVFGNPVGGIFVIVFHIIVVTNIDNLLRP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FLV L + G++ G +G+ +GPVLM +I ++ K+ Sbjct: 299 FLVPKSAHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYLVVYKDAP 353 >gi|42525852|ref|NP_970950.1| hypothetical protein TDE0336 [Treponema denticola ATCC 35405] gi|41815902|gb|AAS10831.1| membrane protein, putative [Treponema denticola ATCC 35405] Length = 372 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 68/355 (19%), Positives = 138/355 (38%), Gaps = 10/355 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIA 66 ++ ++++ + + +L + +I P+Y+ +S+ + LA Sbjct: 16 VLLAGMLILVGKLFLPYASVLLWSAVIYVLVRPLYNKILSRMNKEKKTFPIKKRLLAGSF 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + L F+ + K LV + ++ S + L Sbjct: 76 AIITVLVVAGVLFFVVIKIFGQGKILVQNIQSFLENINNSESGFSKTDIAAIVNRLSMGT 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L ++ D I R+A+ + LS++F AL+FFY DG + Sbjct: 136 VDISNLDLQKEFLNLLSSSSDKILRYATSLVKNAGSFFLSLVFFAFALYFFYVDGAYLFS 195 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + K+ + ++ + F G+ +++ + L Y + GV S + L + Sbjct: 196 LLKHAIP-IDNETSDKLFSKIGEITTNLFKGLFLVSFYQCLASFIVYLIFGVQSALLLAI 254 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T +P G + + V + L + + + +D LRPF + I Sbjct: 255 LTFFSTFLPIVGCGLIWFPVGVGLCFTDGLVKGLIFLVVAGSIISFMDNFLRPFFLKDRI 314 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 K+ L FF ++GGV G+ +GP+++ L I ++ I+E KE NF Sbjct: 315 KIHPLLIFFSMLGGVSMFSFDGIILGPMIVILFFTILDMAL-DIEEKKENDEDNF 368 >gi|325475471|gb|EGC78652.1| membrane protein [Treponema denticola F0402] Length = 372 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 68/355 (19%), Positives = 138/355 (38%), Gaps = 10/355 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIA 66 ++ ++++ + + +L + +I P+Y+ +S+ + LA Sbjct: 16 VLLAGMLILVGKLFLPYASVLLWSAVIYVLVRPLYNKILSRMNKEKKTFPIKKRLLAGSF 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + L F+ + K LV + ++ S + L Sbjct: 76 AIITVLVVAGVLFFVVIKIFGQGKILVQNIQSFLENINNSESGFSKTDIAAIVNRLSMGT 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L ++ D I R+A+ + LS++F AL+FFY DG + Sbjct: 136 VDISNLDLQKEFLNLLSSSSDKILRYATSLVKNAGSFFLSLVFFAFALYFFYVDGAYLFS 195 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + K+ + ++ + F G+ +++ + L Y + GV S + L + Sbjct: 196 LLKHAIP-IDNETSDKLFSKIGEITTNLFKGLFLVSFYQCLASFIVYLIFGVQSALLLAI 254 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T +P G + + V + L + + + +D LRPF + I Sbjct: 255 LTFFSTFLPLVGCGLIWFPVGVGLCFTDGLAKGLIFLVVAGSIISFMDNFLRPFFLKDRI 314 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 K+ L FF ++GGV G+ +GP+++ L I ++ I+E KE NF Sbjct: 315 KIHPLLIFFSMLGGVSMFSFDGIILGPMIVILFFTILDMAL-DIEEKKENDEDNF 368 >gi|311233404|gb|ADP86258.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris RCH1] Length = 389 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 137/328 (41%), Gaps = 6/328 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F ++ + + + +P Y S E A++ V+ L ++P++ + Sbjct: 37 VAPFLHTIILSSVFSASIYPFYRRLTSYLGERPVPAALLVLAGVVILVVIPVVVFVIGLI 96 Query: 87 LEMKELVSKVV--LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + VS + LA G+ + P W E ++ + Sbjct: 97 PQAVASVSAITRWLAGHGGLDGLNDAALAPYIAWVRENLPFIDPAQLDVRSSLVQASRAA 156 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + ++ + L + +++ +FF +DG + Q++ L L +I Sbjct: 157 G-QTLLQWGTYVLGNTLLLFGHFLLLLLCMFFMLKDGAWMVQRVRYLSP-LRIDQQDRII 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 + +V RS +G ++A+ +GL+ G A G+P + G + A +++P G + + Sbjct: 215 LELRRVGRSVLVGGLLVAVIQGLLGGVALAAVGIP-ALFWGTLMAFASLVPVVGTGLVWV 273 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 YLL+ +A L LW I + D LRP+ + G + +P F ++GGV+ Sbjct: 274 PAVCYLLLTSQWESALFLSLWCGIVVVGADSILRPYFMRGGVGMPVFFIFLSILGGVKAF 333 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+LG+ GP++++ V+ ++ Sbjct: 334 GMLGILDGPLILSFTVVMLSLYGDEYRD 361 >gi|332182085|gb|AEE17773.1| protein of unknown function UPF0118 [Treponema brennaborense DSM 12168] Length = 407 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 72/374 (19%), Positives = 149/374 (39%), Gaps = 22/374 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--- 57 M M + + ++ L L FF +L +++ P++ +S+ Sbjct: 39 MDNKRTLQTVFMFALFALLFVLILGMLHPFFTVILWTILLYIILNPLHHRCVSRLNAQKK 98 Query: 58 ----SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 LA + +V + + I PL+ + + +M + V P +L+ Sbjct: 99 LYEFRRHVLAGVFSVGTLIIIIGPLITIATLLVQQMLSFLHAVEDFINRN---PDFLTSS 155 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM-------IFLDYCLS 166 G + L T L+TN I FI +++SR ++ +S Sbjct: 156 EIGKSVLGFIDRFNLDFIDLN---STDLRTNLIKFIQQYSSRIVSTGATVLSSTGNFLVS 212 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++F+ AL+F + DG ++ L + + P Y + + ++ R F G ++A+ +G Sbjct: 213 VLFVTFALYFCFLDGRYLA-SLLAQAIPINPQYMSALMKKFAEITRHLFSGYILVALYQG 271 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + V + VI + IP GA + + + I + ++ + Sbjct: 272 FAAFIIMSIFRVQGSLLFAVILMFASFIPLFGAALVWLPMGIVICATDSLLKGILFLVLC 331 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I + +D LRP + IK+ L FF ++GG++ G+ GL +GP+++ L + Sbjct: 332 GICVSFLDNFLRPMFLKDRIKVHPLVIFFAILGGLKVFGMNGLLLGPMIIILFFTVLDLL 391 Query: 346 IMAIKENKEKISSN 359 + + +I+ + Sbjct: 392 VNSEAAVPTEITDS 405 >gi|237747158|ref|ZP_04577638.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378509|gb|EEO28600.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 359 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 74/339 (21%), Positives = 143/339 (42%), Gaps = 20/339 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + F A + AL + P++ K + TF A++ + + + ++P+L Sbjct: 35 VFLCYLMTLPFLASLAWALALAVLFMPLHRKICRKIK-RPTFSAILTSAIAIVIVVIPVL 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE--LWTKHLSHPQSLKILS 137 + +LE+ + ++ + G W ++ + + LW ++ SL Sbjct: 94 LITVRVVLEISRGSTLIMSKVESG----EWQRNLERMPYVGKVLLWAENQLDIPSLIDNL 149 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 +FL F+ + I+ LFFF RD I + + L Sbjct: 150 TSFLTAQVTSFLRSS--------FIQVIVIVLTFYLLFFFLRDRNQILRTIRRFSP-LCG 200 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 + +++ IR+T G +A +G + G +W+ G+P+ + G I I+++IP Sbjct: 201 CETNGLFKVISTTIRATVFGTIAVAAVQGSLAGFMFWMLGLPAPLLWGAIMTILSIIPLL 260 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 GA I + SIYL + GN+ L WG + VD L P L+ ++L + F L Sbjct: 261 GAYIIWLPASIYLALDGNLMYGLILAGWGMFVVGTVDNLLYPILISKKLRLHTVVAFISL 320 Query: 317 VGGVRTMGLLGLFIGPVLM---ALIAVIWKESIMAIKEN 352 GG+ G G+ +GP+ + A + +W+ + ++ Sbjct: 321 AGGILVFGAAGIVLGPITLTASAYLMHLWRSRTVESRKP 359 >gi|86130132|ref|ZP_01048732.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85818807|gb|EAQ39966.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 345 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 126/335 (37%), Gaps = 22/335 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + + +L A+ + + K++ +S+ A + + +VP+ L Sbjct: 29 MATYLSGILGAITLFVLLRKWQEYLVKKRKWNSSVSACVLMAGSFLVILVPIAGLVLMLT 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ + V G + + T+ + + + T+ + Sbjct: 89 SKISKAVEN-------------------SGKVINIVKTEMADIESRFGLDIASSIDTSSV 129 Query: 147 -DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D+I + ++I M L++ + + + + L K I + Sbjct: 130 TDWISSNLQGLAGGTFNVFIAIGLMYFMLYYMLTNRRTFRESMLEYIP-LSEKNLKLIGK 188 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 ++++S +G+ ++A+ +GLV + + GV I + +MIP G + Sbjct: 189 DSQELVKSNAIGIPLVALLQGLVALIGFLILGVEDPFFWFAIVTVGSMIPFVGTALGIVP 248 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V I L G+I+ A + ++G + + D R + + L T G++ GV G Sbjct: 249 VCIILYAAGDIWQAIVMIIYGTVVVGSTDNLFRLVIQKRLADVHPLITIIGVIVGVPLFG 308 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GL GP+++++ +I K + K Sbjct: 309 FIGLIFGPIVVSIFLLIVKIYKQEYGKEKPSEQEE 343 >gi|91774322|ref|YP_567014.1| hypothetical protein Mbur_2413 [Methanococcoides burtonii DSM 6242] gi|91713337|gb|ABE53264.1| protein of unknown function UPF0118 [Methanococcoides burtonii DSM 6242] Length = 345 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 139/338 (41%), Gaps = 9/338 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ + +V Y L + L A I+ P+Y + + A++ + M L + Sbjct: 16 IIVLAVVLSYALLPYINAFLGAFILYVIFKPVYILLTERLKLKENISAILVMILSMILVV 75 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +P+ ++F + E++ +++ ++ N + + + + + +E+ + + Sbjct: 76 LPIYYMFTLIIGEIEMVITNIIT-NLSYVDITNYFDIVKNIDYINEIAPDIDIQGKIVT- 133 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + ++ + +S+I M L++ + + Sbjct: 134 -----LISTLGSYLSKHLIGAVQNISGLLISVIIMFFLLYYLFTSTNTNISNQLQDLIPF 188 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ + +I ST + +IA+ +G ++G ++ G+ +T +++ +P Sbjct: 189 NKKNTNKLLTEIKNIIHSTLIATLLIAVLQGTIIGITFYAVGINGVALWAAVTTVLSFLP 248 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 GAP+ + ++ LI + A + + G I L +D LRP++ + + Sbjct: 249 VVGAPLVWAPAVLFKLITQDYVAAIVILVAG-IILSNIDNVLRPYIQKKVGAMHPFVSLL 307 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ G+ GL+G+ +GP+L++ +I K +N Sbjct: 308 GIFVGIYLFGLVGIVVGPLLISSFLLILKMFNEEYIQN 345 >gi|257457925|ref|ZP_05623084.1| putative membrane protein [Treponema vincentii ATCC 35580] gi|257444638|gb|EEV19722.1| putative membrane protein [Treponema vincentii ATCC 35580] Length = 362 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 137/363 (37%), Gaps = 9/363 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-------S 53 M++++ ++ + + + + +L + I+ P+Y I Sbjct: 1 MQKSLKFQTVSFFIILAITVTLVARVFLPYASVLLWSAILYIMFGPLYHKLITKLNPESR 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + +A I + ++ L + F + + + V KV+ + D Sbjct: 61 WFKARQKIIAAIFSAGIIILVAGIMFFFLIKLIGQGQMFVKKVMNFFITHPHLLTMEKDS 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P ++ + D I R+A+ ++ LS++FM A Sbjct: 121 PLNELVMQISMGTIDLSSFDLKKELMNFFLQYADTIIRYATGIAKNIGNFVLSLLFMCFA 180 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L+F + DG + + + + +K++ + I + F+G +++I + Y Sbjct: 181 LYFLFIDGQYLGSVFVT-AIPIQVSEGQKLAAKIKDTITNLFMGYFLVSICQFAAAFIVY 239 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + V + L +T + +P G + + + + +L+ + + + Sbjct: 240 TIFRVEGALLLSFLTFFSSFLPFFGCALVWLPLGVEILLTAGLLKGILFLCVAGFFISSI 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D LRP + I++ L FF ++GG+R L G+ +GP+ + L+ + + + + Sbjct: 300 DNFLRPMFLQNRIQIHPLLIFFSILGGIRFFKLNGIVLGPMFVILLFTLIDIARTSDSTD 359 Query: 353 KEK 355 E+ Sbjct: 360 IEE 362 >gi|148261662|ref|YP_001235789.1| hypothetical protein Acry_2679 [Acidiphilium cryptum JF-5] gi|326405154|ref|YP_004285236.1| hypothetical protein ACMV_30070 [Acidiphilium multivorum AIU301] gi|146403343|gb|ABQ31870.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|325052016|dbj|BAJ82354.1| hypothetical protein ACMV_30070 [Acidiphilium multivorum AIU301] Length = 352 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 128/326 (39%), Gaps = 23/326 (7%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +++ F + AL + P+ A+I + P + Sbjct: 35 LVLCALLAAPFAGALTWALTLAILFTPLQRRLERLVR-HPGAAAIITVGIAAIVVAAPAV 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + E + V G + VP + W Q++ + Sbjct: 94 LVIERLVREAAASAAYVQQHLAAGTLAVPPQVD-----------WLARQIDLQAMITRAS 142 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L T G F+ ++ + I+ LFFF R + + L Sbjct: 143 GLLSTVGASFLRGSLAQ--------AVEIVLTFYILFFFLR-DRARADAALRAVLPLTGP 193 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 ++ + + G +++ +GL+ G +W G+ + + GV+ +++++P G Sbjct: 194 ETDRLFSRTADTVYAVIYGTVMVSTLQGLLGGLMFWGLGLAAPLLWGVVMGMLSLVPVLG 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A I + ++ L + G+ A L LWGA+ + +D +RP LVG ++L +P+F ++ Sbjct: 254 AFIVWIPEAVLLALNGHEEKAIILSLWGALVVGTIDNVVRPVLVGNRLQLHTVPSFIAII 313 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 GG+ G G +GP++++ V+++ Sbjct: 314 GGLILFGPPGFVLGPLIVSATLVLFE 339 >gi|149189367|ref|ZP_01867652.1| hypothetical membrane spanning protein [Vibrio shilonii AK1] gi|148836725|gb|EDL53677.1| hypothetical membrane spanning protein [Vibrio shilonii AK1] Length = 354 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 129/340 (37%), Gaps = 7/340 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++ L+ F V+ II +P+ +K S + + ++ + L + Sbjct: 21 ISILVYWCFSILRPFMMLVVWGGIIAVALYPVALWLHAKCRISKGKASGLLSLIGVLLLL 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLK 134 +PL++L E+ S++ + + ++P G ++ + Sbjct: 81 IPLVWLSSGLYTGGTEVYSQLQDGTLQVPRPTQAVKELPVVGEKIYAAMYHASTNLEGAM 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +K+ + F L + +S I + F + + + + + Sbjct: 141 AKYSEQIKSLATT-LAGAVGSFAGGLLQFIVSTIIAGV----FMANAENCQKAFNKVANR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L ++ + +RS G+ +A+ + ++ VP+ + +MA+I Sbjct: 196 LTNGKGAELVNLSKSTVRSVVQGVLGVAVIQSIMAAVGMAFVDVPAIGLWALAVLLMAII 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 ++ V Y+ + A +W I + D L+P L+ +P L Sbjct: 256 QLPPILALIPVIAYVFGTQSTTAAVLFLVWCVI-VSGSDAVLKPMLLSRGSDIPMLVLLL 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ G++GLF+G V+++L ++ + ++ K+ Sbjct: 315 GALGGMAMSGIVGLFVGAVVLSLSYQLFVSWLEEPEKAKD 354 >gi|325958067|ref|YP_004289533.1| hypothetical protein Metbo_0309 [Methanobacterium sp. AL-21] gi|325329499|gb|ADZ08561.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 377 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 142/358 (39%), Gaps = 10/358 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEES 58 M + N ++I+ +++VS L + V+ I + P+ +K + Sbjct: 12 MINGLKNNITSAIFIIILLMVVSAVLLTPMLSMVVLGAIFAYAIRPLSRKLEPYTKFQSV 71 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + F+ +I + + + ++ + + V + L++ + + + + Sbjct: 72 AIFVGMIIVILPLIIILLIFINTIISAAPSLIVFVKNLNLSSLNSTTLQNY------PLI 125 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + + S + + + + F L + + F+F Sbjct: 126 QQNFPGSSSSQMINSVVNSIYVGMGDVVRSVTEYLLGFVQSIPTLLLQLFIFFASTFYFA 185 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG I + L+ + Y+K + + + V++S F G + A G++ G +W+ G Sbjct: 186 RDGDRIWEYLNYIIPDDRKHYFKTLLKEIDLVLKSIFFGHFVTAALTGIISGIGFWIMGY 245 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + LG +T ++P G + A+++Y L+ GN A + G + L ++D +R Sbjct: 246 PYPLFLGTLTGFFQLMPIIGHWPTIVALALYDLVIGNFLRAAAVISLGVL-LSLMDMYVR 304 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + G + L G + G +GL+G IGP+++ + ++ + Sbjct: 305 PKVAGKYADIHPLIFLLGFICGPLVLGLVGFIIGPLVLGVTYAAVVAYKKENQDKNPE 362 >gi|325287380|ref|YP_004263170.1| hypothetical protein Celly_2482 [Cellulophaga lytica DSM 7489] gi|324322834|gb|ADY30299.1| protein of unknown function UPF0118 [Cellulophaga lytica DSM 7489] Length = 339 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 138/359 (38%), Gaps = 23/359 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M+ + + +++ +++ L F + + + VL A+ + +K Sbjct: 1 MKYISPHIIRQIFVLLLIVLMGGLIFKEILPYLSGVLGAITMYVILKKPMQKLANK-GWY 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + A+ + ++PL L + ++K V G + + Sbjct: 60 ANIAAIFLMILSFLCIMIPLTGLGFMMGSKIKYAVDNSQKVINAGKNQLQKVESFLHIDL 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +E+ T ++ +++ F + +SI M L+F Sbjct: 120 GTEIDTSSIT------------------NWLSDKLQNFAGGTFNMVISITIMYFMLYFML 161 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + L + K I + + +++ LG+ ++A+G+GLV +++ G+ Sbjct: 162 TNRKKLRESLFEYIP-IKDTNLKTIGKEITANVKANALGIPLVALGQGLVALLGFYIFGI 220 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + I +MIP G+ + V I L GN F A + ++G + + D R Sbjct: 221 EDPFFWAAVVTIGSMIPFVGSALGTVPVFILALSNGNTFQAWGILIYGLVAIGATDNIFR 280 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +++ + L T G++ GV G +GL GP+L++L V+ + E+ I Sbjct: 281 LYILKRLDDVHPLITLVGVLVGVPLFGFIGLIFGPLLVSLFLVVVRIYKNQYGESGNSI 339 >gi|208778982|ref|ZP_03246328.1| hypothetical membrane protein [Francisella novicida FTG] gi|208744782|gb|EDZ91080.1| hypothetical membrane protein [Francisella novicida FTG] gi|328676661|gb|AEB27531.1| hypothetical protein FNFX1_0583 [Francisella cf. novicida Fx1] Length = 341 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 70 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 127 NQDKDMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|194323489|ref|ZP_03057266.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|194322344|gb|EDX19825.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] Length = 341 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 70 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 127 NQDKDIIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|89256840|ref|YP_514202.1| hypothetical protein FTL_1556 [Francisella tularensis subsp. holarctica LVS] gi|167009266|ref|ZP_02274197.1| hypothetical protein Ftulh_00695 [Francisella tularensis subsp. holarctica FSC200] gi|89144671|emb|CAJ79995.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica LVS] Length = 341 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 131/326 (40%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 127 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGVTKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|253572345|ref|ZP_04849748.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838120|gb|EES66208.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 235 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 6/230 (2%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQLD 189 K L + + FI R G I + +++ M+ L+F G + ++ Sbjct: 6 KKRGNDVLGKDTLSFIVSILPRIGQIIMESISSLAINLFVMVFVLYFMLIGGKKMEAYVN 65 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + A +++ + ++RS +G+ ++AI +G V Y + G P+ + LG +T Sbjct: 66 DILP-FNEANTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNILVLGFLTC 124 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +IP G + + V+ YL + G+ FNA L +G I + D +R L Sbjct: 125 FATIIPMVGTALIWFPVAAYLAVTGDWFNAIGLAAYGGIVISQSDNLIRFILQKKMADTH 184 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + + Sbjct: 185 PLITIFGVVIGLPLFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPA 234 >gi|88704256|ref|ZP_01101970.1| Integral membrane protein [Congregibacter litoralis KT71] gi|88701307|gb|EAQ98412.1| Integral membrane protein [Congregibacter litoralis KT71] Length = 382 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 130/343 (37%), Gaps = 9/343 (2%) Query: 12 MRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +R ++F+ ++ + F +L +I+ + +P++ + + + A + Sbjct: 21 IRLGLVFVGVVACVEVFAPFMPIMLWGMILAISLYPVFGALRGRTGWGAGSTASFIVILG 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + L VP + L + +++ + + P G E W++ Sbjct: 81 ILLLGVPTVLLGSSFATHIFDVIGDFDAQAVTVRLPDPSVKEWPIIGEHVYEAWSQAHED 140 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L + AS G + + II I+ + G S + + Sbjct: 141 LPAYLESLQPQLGNFSKAALRSAASTAGTLLFFFGALIIAGIMMAY-----GESGNAAMA 195 Query: 190 SLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + I +RS G+ +A + L+LG + +AG+P+ L ++ Sbjct: 196 RIFSRMVGEQRGPGLHSITTLTVRSVATGVVGVAFIQALLLGVGFMMAGIPAAGLLALVV 255 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++ A + Y+ G+ L + D L+P L+G + + Sbjct: 256 LVIGILQLPALLVSLPAIAYVWGMGDGSTVVNILLTVYFVVAGFADNVLKPMLLGRGVSV 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P G +GG+ G++GLF+G V++++ ++ + Sbjct: 316 PMPVVLIGALGGMMGAGIVGLFVGAVVLSVGYELFMSWVDEAP 358 >gi|283851774|ref|ZP_06369052.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283572894|gb|EFC20876.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 367 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 131/343 (38%), Gaps = 10/343 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + L F ++ AL++ P+ + A T+ + + Sbjct: 16 FLAAVSIMATLLWPFRHAMVIALVLATLVRPLGAWLPRFMRARRLLAATTLTLLTVLFVL 75 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHG--IPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +PL L E V + G + W +P WA + Sbjct: 76 LPLAGLLTLLTSEAVTFVQTAAAWFKAGGLHDIVAWARTLPLPGWAKAYLVASPIDLHKI 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + G+ F+ G + L + +++ LF+ +G ++++L Sbjct: 136 EAWALASGGDIGLWFL-----WAGKGVANIGLQLFVLVMFLFYLLAEGEFLTERLRRASP 190 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L I V RS LG ++ GLV G W+AG+ + G + I ++ Sbjct: 191 -LRRDQEDAIIARFKAVSRSVLLGGLGTSLAIGLVTGVGLWIAGI-TPFLWGAVAVIASL 248 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + IYL+ G+ A L L+ + + VD +RP + G ++ + Sbjct: 249 IPVVGLSLILIPSIIYLVATGSWKMAIFLALYWLLVINSVDNVVRPLFMRGQARMSLVWV 308 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++GG+ G LGL GP+ +++ + + + A E +++ Sbjct: 309 FVSILGGILLFGPLGLLYGPLALSISFLFFDIFLEAQGETEDR 351 >gi|312969715|ref|ZP_07783898.1| UPF0118 inner membrane protein ydiK [Escherichia coli 1827-70] gi|310338000|gb|EFQ03089.1| UPF0118 inner membrane protein ydiK [Escherichia coli 1827-70] Length = 207 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 1/189 (0%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 M++ Y G ++Q + L + + IR+ LG+ + A+ + + Sbjct: 5 ALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAV 64 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + G ++GVP L V+ + ++ G I+L G+ T L +W Sbjct: 65 LGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG- 123 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + +D +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 124 VVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVE 183 Query: 348 AIKENKEKI 356 + ++ Sbjct: 184 EVPPPTDQP 192 >gi|303327143|ref|ZP_07357585.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3] gi|302863131|gb|EFL86063.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3] Length = 368 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 116/299 (38%), Gaps = 6/299 (2%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP- 107 F+ + + IA ++ VP+ L + ++++ + +P Sbjct: 66 RRFLIRFSHHMPLCSYIA--AIFSGLFVPIAILALLVSPQAVAGLARLRELQANNFQLPP 123 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 +W+ I + + +T + R G + + Sbjct: 124 QWVEHIQHWRLSLTEYPSIEKAVNDFLHNLDTLFGDAVTMLVSRSFGFLGGTMTAFWTTF 183 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +F+ + + F +++ HL A ++ + + +R LG+ ++A+ +G Sbjct: 184 LFLTLTVLFTVY--SRRIRKVTCRIFHLPQALLRRFISAIHRALRGIMLGIVLVALAQGF 241 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G + +AG G++ ++A IP G + + + + L G A L LWG Sbjct: 242 LCGIGFAVAGFNQPAFWGMLATLVAPIPVVGTALVWLPLCLSLWFTGKTMAAVGLALWGM 301 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + VD LRP + IK PF ++ G+ + G +GL GPVL+A +E+ Sbjct: 302 LAVAGVDNVLRPLFLRQGIKAPFFVLILAILCGLASFGPVGLIAGPVLLAFAMQAVEEA 360 >gi|134302427|ref|YP_001122397.1| hypothetical protein FTW_1565 [Francisella tularensis subsp. tularensis WY96-3418] gi|134050204|gb|ABO47275.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 341 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 127 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|254372555|ref|ZP_04988044.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570282|gb|EDN35936.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 346 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|118497190|ref|YP_898240.1| hypothetical protein FTN_0591 [Francisella tularensis subsp. novicida U112] gi|118423096|gb|ABK89486.1| conserved hypothetical membrane protein [Francisella novicida U112] Length = 346 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDIIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|289580082|ref|YP_003478548.1| hypothetical protein Nmag_0398 [Natrialba magadii ATCC 43099] gi|289529635|gb|ADD03986.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 425 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 125/345 (36%), Gaps = 17/345 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + L+ L + + VL +++ + P A+ + Sbjct: 19 VVAVVAALLGLLVILPYLQYVLLGVVLAYILRPAQRWLERYTG--PLIAALTLVAVAILA 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++PL ++ E LV + + + + E + + Sbjct: 77 ILLPLTYVLIVAFREALGLVGAIQNGQLDIEAIESQIEATGYSIDVVEFYQTYQEP---- 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 G+ + A + + + LF RDG ++ + + Sbjct: 133 --------IATGLQGLAMSALDIAGGVPGILIGLTVTLFVLFALLRDGSEFAEWVTRVLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ + +++ ++ +G +A + ++LG L VP+ V L V+T + A+ Sbjct: 185 -VEDELLSELLSELDQLMWASVVGNVAVAAIQAILLGIGLALLEVPAVVLLSVVTFVFAL 243 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + VS+YLL G A L +G+I + D +RP L+G Sbjct: 244 LPLIGAFGVWVPVSLYLLATGQFVVAGILVAYGSI-VSASDTYIRPALIGRTSAFNSAII 302 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ GG+ G +GLFIGPV++ + + ++ Sbjct: 303 VVGIFGGLIIFGAVGLFIGPVVLGGAKITLDLFARERAAGTQPVT 347 >gi|167584523|ref|ZP_02376911.1| hypothetical protein BuboB_04261 [Burkholderia ubonensis Bu] Length = 260 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 7/209 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F E T +A + T +V L ++P+ Sbjct: 56 WVIRAFIPAIAWACVIAIALWPLLKRFESHRLFRERPTVVATVITAAVSLLVVLPVAIAL 115 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFL 141 + + EL + +GIPVP ++ +P G + W HL HP + +E + Sbjct: 116 IQAIGQAHELREWLRTVQDNGIPVPDVVARLPVGAPQVAAWWQAHLGHP----LHAEAAM 171 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K + F FG L FM++ LF R G +S L + F Sbjct: 172 KGVNSETFLAFGRHFGSKLAHAVLEFGFMLVTLFVILRAGHKLSGALLQGVQRAFGGNGA 231 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ + + T G+ ++ +GEG +LG Sbjct: 232 QLIERMAAAVHGTVTGLVVVGLGEGALLG 260 >gi|328675713|gb|AEB28388.1| conserved hypothetical protein [Francisella cf. novicida 3523] Length = 341 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 129/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + + ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFLIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H ++ Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGTTLQEHFDKLLNMV 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 127 NQDKNMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGCIMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIVYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|254368119|ref|ZP_04984139.1| hypothetical protein FTHG_01453 [Francisella tularensis subsp. holarctica 257] gi|254369723|ref|ZP_04985733.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|134253929|gb|EBA53023.1| hypothetical protein FTHG_01453 [Francisella tularensis subsp. holarctica 257] gi|157122682|gb|EDO66811.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 346 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 131/326 (40%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGVTKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|115315228|ref|YP_763951.1| hypothetical protein FTH_1508 [Francisella tularensis subsp. holarctica OSU18] gi|115130127|gb|ABI83314.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] Length = 346 Score = 134 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFFTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFIVGIIYILIGASVFVIYGVTKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|254374014|ref|ZP_04989496.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571734|gb|EDN37388.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 346 Score = 134 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDMIISNLGKILPTI-RYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|222479371|ref|YP_002565608.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452273|gb|ACM56538.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 345 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 120/309 (38%), Gaps = 17/309 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + +L +++ + +P+ T A++ + + ++P+++L + + Sbjct: 34 PYLQFILFGVVLAYILFPVQQRAEQHV--RPTIAAIVIVLGALLFVLIPIIYLLTIAVQQ 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +VS V + L + L+ + + Sbjct: 92 SLRVVSAVRNGQIDVASIEELLESTGYRIDLVALYESN------------QERIATSLQE 139 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A + + + LF RDG + + + ++ + Sbjct: 140 VTSGAIDLAGSLPGLFIGLTITLFVLFALLRDGEQLVAWV-QWVLPVDEDILDELREGLD 198 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 +++ ++ +G +A + +LG +AG+P+ + L V+T ++ ++P GA + ++ Sbjct: 199 QLMWASVVGNVAVAAIQAALLGVGLAIAGLPAVIFLTVVTFVLTLLPLVGAFGVWVPAAM 258 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YLL G + + ++G + F D LRP L+G G+ GG+ G +G Sbjct: 259 YLLAVGRPIASAAIAVYGLLVTFS-DTYLRPALIGRTGAFNSAIIVIGIFGGLVVFGAVG 317 Query: 328 LFIGPVLMA 336 LFIGPV++ Sbjct: 318 LFIGPVVLG 326 >gi|187932032|ref|YP_001892017.1| hypothetical protein FTM_1403 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712941|gb|ACD31238.1| conserved hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 346 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|153833033|ref|ZP_01985700.1| transporter, PerM family [Vibrio harveyi HY01] gi|148870754|gb|EDL69660.1| transporter, PerM family [Vibrio harveyi HY01] Length = 379 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 115/337 (34%), Gaps = 7/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI++V + F +L AL++ +P+ K SS A + + + + P Sbjct: 28 FIVIVCWWAFLPFLPILLWALVLAIALYPVKLMIERKMGLSSARTATLIAIVGVLILGTP 87 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + + + + + P G ++W + + Sbjct: 88 TAMVGNSFASKTLGVFESYRDGTLVVSKPADSVKEWPLVGRKLHKVWDEAAEDLPNFIEK 147 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + +K FI +I II ++ + + Sbjct: 148 RQPQIKGVFSWFINS-----ATGAAKSVFMLIGAIIIAGIMLAWAQPAARSIRKIFISFT 202 Query: 197 PA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + IR +G+ IA + G L+GVP+ +I + A++ Sbjct: 203 DEERGPELHELTTATIRQVAIGIIGIAFLTAMTFGGVVALSGVPAAALFTLIALVFAIVQ 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I L +F I ++D L+P ++G +++P G Sbjct: 263 LPVTIIAIVAVAILWSGDTGTIHNSIFTVLLIAASLIDNFLKPLILGRGLEVPMPIVLIG 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VGG+ + G+LG+FIG +A ++ + + A ++ Sbjct: 323 AVGGMMSGGILGMFIGAAFLAAGYQVFMKWVDAETQD 359 >gi|332171189|gb|AEE20444.1| protein of unknown function UPF0118 [Krokinobacter diaphorus 4H-3-7-5] Length = 345 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 135/353 (38%), Gaps = 26/353 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + P + + ++F+I++ + + + + VL A+ + + K++ + Sbjct: 4 IKPGLLRQAFVIFLIILLGWLIFKEMATYLSGVLGAITLFVLMRKWQGHLVKKRKWNPGV 63 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + ++P+ L ++ + V G Sbjct: 64 AAGLLMTASFLVILLPIAGLVLMLSSKISKAVEN-------------------SGKVIDI 104 Query: 122 LWTKHLSHPQSLKILSETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L T+ S S + + + T+ I +++ + ++I M L++ + Sbjct: 105 LKTELSSLEASFGMDLASSIDTSSITEWVSNNLQGLVGSTFNIFIAIGIMYFMLYYMLTN 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L K I + +++S +G+ ++A+ +G V + + GV Sbjct: 165 RRTFRESLLEYIP-LSDKNLKLIGKDSVDLVKSNAIGIPLVALLQGAVALIGFLILGVED 223 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 I + +MIP G + V I L G+++ + L L+G I + D R Sbjct: 224 PFFWFAIVTVGSMIPFVGTALGVIPVCIILYAAGDVWQSIVLALYGIIVVGSTDNLFRLV 283 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + L T G++ GV G +GL GP+++++ +I K + Sbjct: 284 IQKRLADVHPLVTIIGVIVGVPLFGFIGLIFGPIVVSIFLLIVKIYKHEYGKE 336 >gi|237749317|ref|ZP_04579797.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380679|gb|EEO30770.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 375 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 142/337 (42%), Gaps = 16/337 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + F + + AL + PI+ + K ++ A++ + + + ++P++ Sbjct: 37 VFLCYLMTVPFLSSLAWALALAVLFMPIHRRILKKLKK-KNIAAMLTSALAIIIVVIPVM 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 ++ +LE+ + ++ G L +P A HL+ Q++ Sbjct: 96 WMVIRVVLEVDRGATLIMDRVSSG-EWQDNLESMPFVGRAVYWLENHLNIHQAV------ 148 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 N ++ + F + I+ LF+F RD I + + L Sbjct: 149 ---NNLTSWLTAQVTLFLRSSFIQIIVIVLTFYLLFYFLRDRNEILRTVRRFSP-LCGRE 204 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + ++V IR+T G ++ +G + G +W+ G+P+ + G I I+++IP G+ Sbjct: 205 TNGLFKVVNDTIRATVFGTLAVSAVKGFLSGFMFWVLGLPAPLLWGSIMGILSIIPLLGS 264 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + ++YL + G A L +WG + +V+ L P LV +KL + F L G Sbjct: 265 YIIWIPAAVYLALDGYWAQALVLVIWGIVVGGVVNNVLYPILVSKKLKLHTIVAFIALAG 324 Query: 319 GVRTMGLLGLFIGPVLM---ALIAVIWKESIMAIKEN 352 G+ G G+ +GP+ + A + +W+ K + Sbjct: 325 GILVYGASGVILGPITLTASAFLLHLWRLKATGYKRD 361 >gi|320352586|ref|YP_004193925.1| hypothetical protein Despr_0453 [Desulfobulbus propionicus DSM 2032] gi|320121088|gb|ADW16634.1| protein of unknown function UPF0118 [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 119/335 (35%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F+ + A + P YS SK A + + +PL++ Sbjct: 27 VLWPFWNQLFVAFFLASIFHPAYSRLSSKT--RPWVAAALTCTLITLCVFLPLMYCIKSI 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+ ++ + + + L ++ + T L T Sbjct: 85 SAEIPAVIQLGRRTDIFALLQQTLQNSTLIQRTGELLADFGINFEVANIPELMTRLLTTA 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F R S + + + +I+ ++F + ++ L L L A + + Sbjct: 145 GLFASRQVSTWATDIMRFFFDFCILIVCIYFLLIEYHRLTAFLLKLSP-LPEAQNRLLID 203 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + +G + + +G++ G + G+ S V GV+ ++A +P G + Sbjct: 204 KFSSIAGTILIGNGLSGLIQGVLGGIFFAAMGLVSPVLWGVVMGVLAFLPILGVGLVLLP 263 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ +KG + A ++ ++ +P VG +LP + ++GG+ G Sbjct: 264 TTLIFFLKGKFWQAVVTLVFYLFLTVFIEYMFKPKFVGAQAQLPPILVLLSIIGGMSISG 323 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LG+ GP+ + + + + + SN Sbjct: 324 VLGIIYGPLAVTAFLTLSDMYVREYQPYLDSRGSN 358 >gi|325300722|ref|YP_004260639.1| hypothetical protein Bacsa_3645 [Bacteroides salanitronis DSM 18170] gi|324320275|gb|ADY38166.1| protein of unknown function UPF0118 [Bacteroides salanitronis DSM 18170] Length = 331 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 120/326 (36%), Gaps = 33/326 (10%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ I+ + + + + +L + + SK I T+ Sbjct: 10 LIILIVGLGILLFRQAQPYMNGILGGFTLYLLLRGFTNWLKSKI--KPLVAVWIVTIGTT 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++PL + + ++ L + + + G SE Sbjct: 68 LFILIPLSLFSWAVVNQISNLHFDTADIIRPAQQMIDIIEKRTGFDVLSE---------- 117 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQ 187 + FI AS G + D +++ I+ LFF +G + Q Sbjct: 118 ------------KNLSFIITQASSIGHSIMTGVSDLIINLAVAIMLLFFMLWEGDKMEQF 165 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ + + ++RS +G+ ++AI +G + Y L P+ V ++ Sbjct: 166 ISELLP-FEENNKREVLQKIQLIVRSNAIGIPLLAIIQGFISLFGYLLCHAPNPVLTAML 224 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +++P G + + V+ Y I G+ + L +G I + D +R L Sbjct: 225 TGFASIVPLVGTALVWVPVTAYFFIIGDWVHGLILLAYGGIIISQCDNLIRFILQKKMAN 284 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + L T FG+V G+ G +G+ GP Sbjct: 285 IHPLITIFGVVAGLPIFGFMGIIFGP 310 >gi|282158796|gb|ADA78187.1| hypothetical protein NE061598_02800 [Francisella tularensis subsp. tularensis NE061598] Length = 341 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 129/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 127 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + +PS + G I AI +M+ Sbjct: 186 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVDIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|290509932|ref|ZP_06549302.1| hypothetical protein HMPREF0485_01702 [Klebsiella sp. 1_1_55] gi|289776648|gb|EFD84646.1| hypothetical protein HMPREF0485_01702 [Klebsiella sp. 1_1_55] Length = 366 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 127/339 (37%), Gaps = 8/339 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + F +L ALI+ +P++ F +V+ + + L Sbjct: 26 LILALASFCFTVFSPFINMMLWALILAVALYPLHQYFAGLLAGKQGLASVVLVLLGILLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P + + ++ K+ + P ++ +P G S LW + L Sbjct: 86 VIPTVLMITSLAESASAMIDKMGSQSFTIPPPSSRIAALPIIGERLSALWMRASVDLPGL 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + F+ AS G + + +S I I + + G + + + Sbjct: 146 LSNYRSQIGDIAKQFLSILAS-MGGGLIGFIISFIVSGIMMAW----GAAGAISAQRIAI 200 Query: 194 HLFPAY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + ++R+ IR+ G+ +A+ + L++G +A +P+ ++ I+ Sbjct: 201 RITDENKGVTLTRLCTSTIRAVAQGVIGVALIQALLVGVIMLMASIPAVGIFFILALILG 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + + + G + I + D L+P L+G + P Sbjct: 261 IAQVPVILVTAPAIALMWSLGTHSTGMDIFYTILMIVAGMADNVLKPLLLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G +GG+ + G+LG+F+G L+A+ I+ + + Sbjct: 321 VLLGALGGMASNGILGMFLGATLLAIGYRIFMTWVNEGQ 359 >gi|45358583|ref|NP_988140.1| hypothetical protein MMP1020 [Methanococcus maripaludis S2] gi|44921341|emb|CAF30576.1| Protein of unknown function UPF0118 [Methanococcus maripaludis S2] Length = 334 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 140/345 (40%), Gaps = 21/345 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R ++F +Y L F + A+ + + + P+Y K T+ A+I Sbjct: 9 LSRLFMVFSFFALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKFG--RTYGAII----C 62 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++P L L ++ + + + N P +++ + P Sbjct: 63 LLGIVIPSLLLVVLVAEDVVTFLLSLDIENIITKVTP----------ILNDIGYLRVDGP 112 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 K S+ + + + FAS+ + ++F+ F+F +DG ++ Sbjct: 113 DVSKPFSDIW--SVSKPLLNSFASQI-SSIPSLLMKLLFLSFMTFYFLKDGDKLTDSFLI 169 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + K +++ F+G + ++ G++ YWL G+P+ + LG ++ I Sbjct: 170 YVPEDKKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGI 229 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLP 308 + ++P G + +++Y L+ G I L L+G I L + D +RP ++ L Sbjct: 230 LNILPVVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLH 289 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+ GL IGP+++A + I K + K+N Sbjct: 290 PALVLIAFLIGPLVFGIPGLAIGPIIVATVYAIHKVRRLIEKKNN 334 >gi|300710665|ref|YP_003736479.1| hypothetical protein HacjB3_06480 [Halalkalicoccus jeotgali B3] gi|299124348|gb|ADJ14687.1| hypothetical protein HacjB3_06480 [Halalkalicoccus jeotgali B3] Length = 325 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 134/328 (40%), Gaps = 18/328 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M +I +SL + F VL A++I + P+Y + T A+ + Sbjct: 1 MLVVIGAFGTLSLAIVWPFRQYVLLAVLIAYLLTPVYRRLVPVTG--ETGGALALMGAAT 58 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+P L + +L ++ ++ V ++ + + Sbjct: 59 GVVILPFAALLSVVASDALDLAQRLSDSDIDLEEVESVIA--------------ASTGRE 104 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + N + AS +F + I LFFF RDG ++ L + Sbjct: 105 VDLSTTLGTAGENFAGVLVGNASDLVGVFTHALIGITLSAFLLFFFLRDGRYFTEWLFEV 164 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L +++ V ++ + +G +++ +GL+ G + G+P+ V V ++ Sbjct: 165 TP-LPDVVLGELATNVDDLMWAVLVGHVLVSAIQGLLAGIGLAVTGIPNAVFWTVAMMLL 223 Query: 252 AMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A++P GA + + ++YL+ G+ LFL+G + + D LR LV +L Sbjct: 224 ALLPVVGAFLVWGPAAVYLVALGDPVAGGGLFLYGMTVVGLSDNYLRSILVDRRAQLNPA 283 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALI 338 G+VGG+ +G++GLF GPV++ Sbjct: 284 TIMLGVVGGLYLLGVMGLFFGPVIVGSF 311 >gi|260771830|ref|ZP_05880748.1| hypothetical protein VIB_000268 [Vibrio metschnikovii CIP 69.14] gi|260613122|gb|EEX38323.1| hypothetical protein VIB_000268 [Vibrio metschnikovii CIP 69.14] Length = 285 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 12/280 (4%) Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHG-----IPVPRWLSDIPGGMWASELWTKHLSHP 130 +P + +F + + + G + P + + + ++ H P Sbjct: 2 IPSILVFSAIVQQGARFAQTLYHWGNEGGIQTALSHPLIIKTL---TFTNQYLPFHEVTP 58 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q + + F + G + A G + ++ M+ LFF RD I L Sbjct: 59 QQIAQKTAQFATSFGSSLVAISAKIVGDVT-HLVMNFFLMLFVLFFLLRDHDKIINVLRH 117 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + L + K+ + +V +S +G + AI +G+ G A WL G+P + G + Sbjct: 118 ILP-LSRSQEDKLLHEIQQVSKSAIMGSFLTAIAQGVAGGLAMWLVGLPG-LFWGTMMGF 175 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP G + + ++YLL+ G+ A L +W + +D LRP L+ G + Sbjct: 176 ASFIPLIGTALIWIPATLYLLVIGDTAWALFLLIWSIAIVGSIDNLLRPLLMQGSAGMNT 235 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L FF L+GG++ GL+GL GP++ A+ V++ Sbjct: 236 LMIFFSLLGGIQLFGLIGLIYGPLIFAITIVLFNLYEEEF 275 >gi|222445339|ref|ZP_03607854.1| hypothetical protein METSMIALI_00967 [Methanobrevibacter smithii DSM 2375] gi|222434904|gb|EEE42069.1| hypothetical protein METSMIALI_00967 [Methanobrevibacter smithii DSM 2375] Length = 348 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 137/333 (41%), Gaps = 9/333 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +SL + V+ I+ + P+ SK + S ++ + L ++PL+ L Sbjct: 22 ISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRS-----VSIFLAVILVMIPLVIL 76 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + ++S V++ N G + L + M S + S + Sbjct: 77 IAYIISVISGVLSDVLVVNPSGFNLN--LDTVINQMVNSLPADISSGIDTASIKSSLSGF 134 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + L + + + ++++F RDG + ++S +++ Sbjct: 135 IKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRDGDNCYDFVESFIPQESKDFFE 194 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + V +V++S F G + ++ G++ Y L G V LGV+T I +IP G Sbjct: 195 RTVNSVKEVLKSIFYGHFLTSLIIGIIAAVGYSLLGYSQGVFLGVLTGIFQLIPIFGPWP 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++I LI GN + L+G L + D +RP L + L G + G Sbjct: 255 IYWTLAIIDLISGNYVRVVIVILFGFF-LSLSDMYIRPALSSHYADIHPLILLIGFLAGP 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G +GP+++ + + + + ++K Sbjct: 314 LVYGIVGFILGPLILGITYAVLDNFRIELNKSK 346 >gi|148643102|ref|YP_001273615.1| permease [Methanobrevibacter smithii ATCC 35061] gi|148552119|gb|ABQ87247.1| predicted permease [Methanobrevibacter smithii ATCC 35061] Length = 348 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 137/333 (41%), Gaps = 9/333 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +SL + V+ I+ + P+ SK + S ++ + L ++PL+ L Sbjct: 22 ISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRS-----VSIFLAVILVMIPLVIL 76 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + ++S V++ N G + L + M S + S + Sbjct: 77 IAYIISVISGVLSDVLVVNPSGFNLN--LDTVINQMVNSLPADISSGIDTASIKSSLSGF 134 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + L + + + ++++F RDG + ++S +++ Sbjct: 135 IKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRDGDNCYDFVESFIPQESKDFFE 194 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + V +V++S F G + ++ G++ Y L G V LGV+T I +IP G Sbjct: 195 RTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVLTGIFQLIPIFGPWP 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++I LI GN + L+G L + D +RP L + L G + G Sbjct: 255 IYWTLAIVDLISGNYVRVVIVILFGFF-LSLSDMYIRPALSSHYADIHPLILLIGFLAGP 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G +GP+++ + + + + ++K Sbjct: 314 LVYGIVGFILGPLILGITYAVLDNFRIELNKSK 346 >gi|57641584|ref|YP_184062.1| hypothetical protein TK1649 [Thermococcus kodakarensis KOD1] gi|57159908|dbj|BAD85838.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus kodakarensis KOD1] Length = 345 Score = 133 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 136/360 (37%), Gaps = 31/360 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + +I I+ VS + F P+ LI+ + +PI+ + + Sbjct: 1 MRAETAVWAAVIAVILYVSWRVILPFLEPLFFGLILAYAFYPIHRRLRKFVGNRESAAFI 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELW 123 T V L E+ + K+ + I V W+ +P A Sbjct: 61 SFTFLV----------LGGTLTFELAMMSLKLASSFAGSIRDVINWILTLPLPEDARTFI 110 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +K I + S Y + + +A ++ Sbjct: 111 LN---------------IKAEATTRIAEYVSSRAFSIPLYVIQLTVFFLAFYYGLAYSEQ 155 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---S 240 I++ + L ++I V K + + ++ + +G+++ Y + GV + Sbjct: 156 IARTIRELLPEENRELGEEILTSVHKTLSALVRAWLLLNVAKGILMTLGYIVFGVSDVYT 215 Query: 241 HVALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP 298 V G +T + +P + + A +IY + G +A + ++GA + + D T+RP Sbjct: 216 AVIAGFLTFAFSFVPLFEGWMIWLAAAIYFALNGMYLHAIGISVYGAFLVSPMPDYTIRP 275 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LV +L F G+VGG MGL G+ IGP+++ ++ V+ KE + + + SS Sbjct: 276 MLVARDTELDETLVFIGMVGGTWAMGLKGIIIGPIVLNVLLVLIKEWKKLTESSHQLSSS 335 >gi|261350100|ref|ZP_05975517.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|288860886|gb|EFC93184.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length = 348 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 137/333 (41%), Gaps = 9/333 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +SL + V+ I+ + P+ SK + S ++ + L ++PL+ L Sbjct: 22 ISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRS-----VSIFLAVILVMIPLVIL 76 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + ++S V++ N G + L + M S + S + Sbjct: 77 IAYIISVISGVLSDVLVVNPSGFNLN--LDTVINQMVNSLPADISSGIDTASIKSSLSGF 134 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + L + + + ++++F RDG + ++S +++ Sbjct: 135 IKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRDGDNCYDFVESFIPQESKDFFE 194 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + V +V++S F G + ++ G++ Y L G V LGV+T I +IP G Sbjct: 195 RTVNSVKEVLKSIFYGHFLTSLIIGIIAAVGYSLLGYSQGVFLGVLTGIFQLIPIFGPWP 254 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++I LI GN + L+G L + D +RP L + L G + G Sbjct: 255 IYWTLAIVDLISGNYVRVVIVILFGFF-LSLSDMYIRPALSSHYADIHPLILLIGFLAGP 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G +GP+++ + + + + ++K Sbjct: 314 LVYGIVGFILGPLILGITYAVLDNFRIELNKSK 346 >gi|167623922|ref|YP_001674216.1| hypothetical protein Shal_1993 [Shewanella halifaxensis HAW-EB4] gi|167353944|gb|ABZ76557.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 360 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 80/341 (23%), Positives = 137/341 (40%), Gaps = 6/341 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 V + + ++ I+ PI++ + S +V + V + ++PLLF+ Sbjct: 23 VCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSPNMASVFSCTLVTVMVLIPLLFV 82 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSET 139 M E ++ G +L+ I G+ W S + Sbjct: 83 AMAIMNEGINFMTNAYEWLTGGGA-KSFLAHPYIQSGVALLNKWLPFDSIKIDELVQQAA 141 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T ++ D L M+ LFFF RD I + L + Sbjct: 142 GKVTQLSTSFLSASTGIAGDVADTFLDFGLMLFVLFFFLRDQEKIIDNTRHIIP-LSRSQ 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 I V V +S LG + A+ +G++ G A LAG + G + A + IP G Sbjct: 201 QGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGFSG-LFWGSMMAFASFIPFVGT 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + SIYL I G+ A + +WG + + +D LRP+L+ G + L FF L+G Sbjct: 260 AMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPWLMQGNTGMSTLLLFFSLLG 319 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++ GL+GL GP++ A+ V+ + + K+ E+ Sbjct: 320 GLQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE 360 >gi|56707640|ref|YP_169536.1| hypothetical protein FTT_0501c [Francisella tularensis subsp. tularensis SCHU S4] gi|110670111|ref|YP_666668.1| hypothetical protein FTF0501c [Francisella tularensis subsp. tularensis FSC198] gi|224456709|ref|ZP_03665182.1| hypothetical protein FtultM_02652 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370155|ref|ZP_04986161.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874457|ref|ZP_05247167.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604132|emb|CAG45134.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320444|emb|CAL08517.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151568399|gb|EDN34053.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840456|gb|EET18892.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 346 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 129/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKS--SFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +H + ++ Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIP---YIGSTLQEHFDNLLNMV 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +N +P G + + ++ ++ F S+ + L + Sbjct: 132 NQDKDMIISNLGKILPTI-RYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A+ G ++ + + +PS + G I AI +M+ Sbjct: 191 DFHDS-DSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVDIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|317485026|ref|ZP_07943908.1| permease [Bilophila wadsworthia 3_1_6] gi|316923561|gb|EFV44765.1| permease [Bilophila wadsworthia 3_1_6] Length = 353 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 117/343 (34%), Gaps = 4/343 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R + I ++ L F A + ++P Y K S ++ TV Sbjct: 14 SMTRVLACLAIGAWVFLLWPFPITTFMATCMACVTYPAYRKLHRKM--SPSWAMTTYTVG 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+P+ + + + + G + A L Sbjct: 72 LAAITILPIATVVSLVTPQAVAGLKILDGLRDSGWIHSPEAQAWFASVDAWLKNLPGLEG 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + L + ++ I + Sbjct: 132 GLDQLASTAAGLAGTAARTVLAGGVGIAGGAFQAVLVLFLFVMITMMCVTRADLIHEFAC 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + K I +G+ +A+ +G + G + +A VP G+I A Sbjct: 192 RLTQ-WPAEVIDRFVSTIRKAIFGVLVGVVFVALIQGFLCGVGFAIAEVPQPAFWGLIAA 250 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +A IP G + + V I+L + G+ L +W A+ + VD LRPF + I Sbjct: 251 FVAPIPFVGTALVWLPVCIWLWLTGSTVACIGLAIWCALVVAGVDNLLRPFFLKTGIDAS 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + ++ G+ G +G+F GPVL+A+ ES + K Sbjct: 311 VVTLILSILCGLAAFGPVGVFAGPVLVAVAIQAGNESTLCRKH 353 >gi|269962623|ref|ZP_06176969.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832660|gb|EEZ86773.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 382 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 5/330 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I++V + F +L AL++ +P+ K SS A + + + + P Sbjct: 28 LIVIVCWWAFLPFLPILLWALVLAIALYPVKLVIERKLGLSSARAATLIAIIGVLILGTP 87 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKIL 136 + + + P G +W + Sbjct: 88 TAMVGNSFASKTLGAFESYRDGTLVITKPADSVKTWPLVGEKVHAVWFEAADDLPEFIEK 147 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + +K F+ AS +II + L + SI + S + Sbjct: 148 RQPQIKGFFGWFVDT-ASGAAKSVFMLIGAIIIAGVMLAWAQPAAKSIRKIFISFADE-- 204 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A ++ + IR +G+ IA + G+ L+GVP +I I A++ Sbjct: 205 -ARGTELHELTTATIRQVAVGIIGIAFLTAMAFGAVVALSGVPGAALFTLIALIFAIVQL 263 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L + +F I ++D L+P ++G + +P G Sbjct: 264 PVTLIALVTIGLLWSGDSGTIHNVIFTVLLIAASLIDNFLKPLILGRGLDVPMPIVLIGA 323 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +GG+ + G+LG+FIG +A ++ + + Sbjct: 324 IGGMMSGGILGMFIGAAFLAAGYQVFMKWV 353 >gi|269468325|gb|EEZ80001.1| permease [uncultured SUP05 cluster bacterium] Length = 356 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 77/356 (21%), Positives = 145/356 (40%), Gaps = 18/356 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M +++ I ++ F + AL+I ++ Y K SS+ A++ T+ Sbjct: 8 GFMLTLLILAIAGLIWLFTPFIPALFLALLIAIATFSQYIKLQKKISNSSS--ALLMTLL 65 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + I+PL ++ LE+ L+ + L I G + L S Sbjct: 66 VTVVLILPLSYILLISGLEISALIQNINTNFTVEQSNQLLLQTITGLPLSDSLKVTLNSA 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + +K DF + + +I I +L++FY DG S ++L Sbjct: 126 LSNNLENFIINIK----DFSVVILKSIVSLSSHFIFFLIITIFSLYYFYIDGKSTVKRLK 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L L + + + + +IAI +GL+ + G+P + G+ A Sbjct: 182 DLSP-LENHLDDILFNQFSSLSITLVGSVLVIAILQGLIFSIGVMMIGLP-VLFFGIAMA 239 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKL 307 + + IP G I + +S+YL +G +A + +GA+ + I+D +RP ++ + Sbjct: 240 LASFIPVLGGLIIWLPLSLYLYAQGQTTDALIIVFFGAVIIGTIIDHFIRPMVIKKFSQS 299 Query: 308 --------PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L T + G+ G+LGLFIGP++ A+ I+ + + +K Sbjct: 300 SNQSSALDHTLITVLSTLAGIMQFGILGLFIGPIIAAMAISIFDVYAIKYAGSLDK 355 >gi|206579747|ref|YP_002240299.1| hypothetical protein KPK_4500 [Klebsiella pneumoniae 342] gi|288937004|ref|YP_003441063.1| hypothetical protein Kvar_4154 [Klebsiella variicola At-22] gi|206568805|gb|ACI10581.1| putative membrane protein [Klebsiella pneumoniae 342] gi|288891713|gb|ADC60031.1| conserved hypothetical protein [Klebsiella variicola At-22] Length = 366 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 127/339 (37%), Gaps = 8/339 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + F +L ALI+ +P++ F +V+ + + L Sbjct: 26 LILALASFCFTVFSPFINMMLWALILAVALYPLHQYFAGLLAGKQGLASVVLVLLGILLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P + + ++ K+ + P ++ +P G S LW + L Sbjct: 86 VIPTVLMITSLAESASAMIDKMGSQSFTIPPPSSRIAALPIIGERLSALWMRASVDLPGL 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + F+ AS G + + +S I I + + G + + + Sbjct: 146 LSNYRSQIGDIAKQFLSILAS-MGGGLIGFIISFIVSGIMMAW----GAAGAISAQRIAI 200 Query: 194 HLFPAY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + ++R+ IR+ G+ +A+ + L++G +A +P+ ++ I+ Sbjct: 201 RITDENKGVTLTRLCTSTIRAVAQGVIGVALIQALLVGVIMLMASIPAVGIFFILALILG 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + + + G + I + D L+P L+G + P Sbjct: 261 IAQVPVILVTAPAIALMWSLGTHSTGMDIFYTILLIVAGMADNVLKPLLLGRGVDAPMPV 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G +GG+ + G+LG+F+G L+A+ I+ + + Sbjct: 321 VLLGALGGMASNGILGMFLGATLLAIGYRIFMTWVNEGQ 359 >gi|307626825|gb|ADN71129.1| putative inner membrane protein [Escherichia coli UM146] Length = 201 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 1/187 (0%) Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 M++ Y G ++Q + L + + IR+ LG+ + A+ + ++ Sbjct: 1 MLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLG 60 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G ++GVP L V+ + ++ G I+L G+ T L +W + Sbjct: 61 GIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VV 119 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +D +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 120 GTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEV 179 Query: 350 KENKEKI 356 ++ Sbjct: 180 PPPTDQP 186 >gi|254877432|ref|ZP_05250142.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843453|gb|EET21867.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 339 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 125/326 (38%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I I + ++ L F +L A ++ P+ + + + + + ++ Sbjct: 11 IICIIGALVMWVLYPFIYSILFAGLLAIILAPLQEYLEQHIGKHRS--SFLLVMGILLCV 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P+L + YY + E+ + +Q + + IP + + +HL Sbjct: 69 FIPILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIP---YIGSILQEHLDKLIKAI 125 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +N +P+ G + + + ++ ++ F ++ + + Sbjct: 126 NDDSDTIISNLGQILPKV-RYVGSTSISFITDFLITLLLVYQFLVSSSTLEKFAKKVVLK 184 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A G V+ + L G+P+ + L AI +MI Sbjct: 185 DFDDS-DSFISTAIITTRRVSLAIFLTASLVGTVMAITFLLTGMPTPILLAFTVAIASMI 243 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ ++L F + Sbjct: 244 PFMVGIVYILIGASVFVVYGATKAIIILVVGFALNIFTDNIMQPKIINKQVQLSFAASLI 303 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG++ G +G+F+GPV+ + V Sbjct: 304 GILGGIQAFGFIGIFLGPVIFNVTFV 329 >gi|326798185|ref|YP_004316004.1| hypothetical protein Sph21_0757 [Sphingobacterium sp. 21] gi|326548949|gb|ADZ77334.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 347 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 124/342 (36%), Gaps = 20/342 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 I +I+ + LY L+G F +L+ +I+ + + + + AV Sbjct: 8 QKQRNNITLVIIVVLGAFILYSLRGIFGALLATMIMYTIFRSLNLYLTEQLKWRKSISAV 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + + P L + EL P + + + Sbjct: 68 LIIIASFFIIVFPFYGLINMIAKRVIELTKH-----------PDKIQRV--IDEINRFLG 114 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L P + + G+ + + + L I M L+F + Sbjct: 115 DKLQQPDLITNNLQR-----GVAYAGNLMTSILSGAANILLDISVMYFLLYFLFVGCREF 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + + S LG +IA+ +G + YW+ + Sbjct: 170 EKGVLRYSP-FSDENAIRFGVELRNITYSNVLGQGLIAVIQGGAVAFGYWMFDFADPLFW 228 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI I++ IP GAP+ F I I G+ FNA + LWG + + +D LR + Sbjct: 229 GVICVILSFIPVVGAPMVFIPACIIKFIDGDTFNAIAMLLWGILLVSNIDNVLRLVIAKR 288 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + T G++ G+ G++GL GP+L++ + K Sbjct: 289 VGDIHPIITIVGVIIGIPMFGIMGLVFGPLLLSYFLITVKIY 330 >gi|298524597|ref|ZP_07012006.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308378833|ref|ZP_07484018.2| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|298494391|gb|EFI29685.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308359074|gb|EFP47925.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] Length = 350 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 112/317 (35%), Gaps = 7/317 (2%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A + + P++ F + ++ A +S + +VP+ L ++++ +V V Sbjct: 3 AAVGAYLFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSV 60 Query: 97 VLA--NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + G++ + +L+ + + G + F Sbjct: 61 ADWVRTTDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLH-FLR 119 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 S I + + + + L L + + ++R T Sbjct: 120 DAAGSLAGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGT 178 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G +IA +G+ ++ ++AG ++ +++IP G I I ++ G Sbjct: 179 VNGQFVIAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYG 238 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 NI + LW + + +D LRP LV +L + G+ G G+ IGPV Sbjct: 239 NIAGGIFVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPV 298 Query: 334 LMALIAVIWKESIMAIK 350 LM LI + K Sbjct: 299 LMILIVTTIDVYLAVYK 315 >gi|319953361|ref|YP_004164628.1| hypothetical protein Celal_1829 [Cellulophaga algicola DSM 14237] gi|319422021|gb|ADV49130.1| protein of unknown function UPF0118 [Cellulophaga algicola DSM 14237] Length = 342 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 119/327 (36%), Gaps = 21/327 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + + VL A+ + + +S + + + ++P+ + Sbjct: 29 MLPYLSGVLGAITFYVLLRKPMGKLVKR-GWNSDLAVSVLLIGSVIGILIPVGGIILMLA 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ V+ I W + + + KI + Sbjct: 88 NKIENTVAHSEDV-------------IKASKKQLGTWEDKIGYDLTSKIDASAV-----S 129 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +I F + +++ M L++ + + + L + K I + Sbjct: 130 SWISDSLQSFAGGTFNILIALGLMYFMLYYMLTNRRQLRESLYEYIP-IGNDNLKIIGKD 188 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 V ++RS LG+ ++A +G+V + + + VI + +MIP G I V Sbjct: 189 VQAMVRSNALGIPLVAFAQGIVALIGFLIFNIEQPFFWAVIVFVGSMIPFIGTFIGTLPV 248 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I L GN F A + ++G + + D LR ++ + L T G++ GV G Sbjct: 249 FILTLASGNDFQAWGILIYGLVVIGSTDNLLRLVILKRIDNVHPLITLIGVIVGVPLFGF 308 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 +GL GP+L++L ++ + + Sbjct: 309 IGLIFGPLLISLFLIVLRIYKDEYGQE 335 >gi|241668900|ref|ZP_04756478.1| hypothetical protein FphipA2_09034 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 320 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 120/316 (37%), Gaps = 7/316 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F +L A ++ P+ + + + + + ++ +P+L + YY Sbjct: 2 WVLYPFIYSILFAGLLAIILAPLQEYLEQHIGKHRS--SFLLVMGILLCVFIPILIVLYY 59 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ + +Q + + IP + + +HL + +N Sbjct: 60 AISEIVSYLQHPETLSQTFATLGDSIGKIP---YIGSILQEHLDKLIKAINDDSDTIISN 116 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +P+ G + + + ++ ++ F ++ + + F Sbjct: 117 LGQILPKV-RYVGSTSISFITDFLITLLLVYQFLVSSSTLEKFAKKVVLKDFDDS-DSFI 174 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R L + + A G V+ + L G+P+ + L AI +MIP I + Sbjct: 175 STAIITTRRVSLAIFLTASLVGTVMAITFLLTGMPTPILLAFTVAIASMIPFMVGIVYIL 234 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + A + + G D ++P ++ ++L F + G++GG++ G Sbjct: 235 IGASVFVVYGATKAIIILVVGFALNIFTDNIMQPKIINKQVQLSFAASLIGILGGIQAFG 294 Query: 325 LLGLFIGPVLMALIAV 340 +G+F+GPV+ + V Sbjct: 295 FIGIFLGPVIFNVTFV 310 >gi|330946225|gb|EGH47411.1| hypothetical protein PSYPI_36155 [Pseudomonas syringae pv. pisi str. 1704B] Length = 226 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 7/205 (3%) Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSL 133 PL++L + +++ + G+P P+WL+ IP G LWT + Sbjct: 5 APLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAF 64 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G + R A + G L+ LSI+F FFFYRDG ++ + SL E Sbjct: 65 MATLKPHLGQVGNWILARSA-QIGSGILELTLSIVFA----FFFYRDGPRLAAFVLSLLE 119 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + +V ++ G+ A + ++ + +AG+P + LG++T + ++ Sbjct: 120 RLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSL 179 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNA 278 IP G P+ + + +L+ +G + + Sbjct: 180 IPMGPPLVWLPATAWLVWQGGVRHG 204 >gi|330508908|ref|YP_004385336.1| hypothetical protein MCON_3236 [Methanosaeta concilii GP-6] gi|328929716|gb|AEB69518.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 408 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 129/370 (34%), Gaps = 21/370 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + + ++Y K F AP+L + F P+YS A ++ + Sbjct: 8 NLLASAVLLIVFISTVYVTKAFIAPLLLSFFFAFVLLPVYSRIY-CLTGRKNLSAFMSLL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSK------------VVLANQHGIPVPRWLSDIPGG 116 V+ F++ L E L S + + L+++ Sbjct: 67 LVVLFFMIFLSSALNAIATETSGLFSSQEDIVQSIDIYITQKTEESFDTLHVVLNNLVSE 126 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD----YCLSIIFMII 172 A E + + + ++ + I A+ F+ I+ Sbjct: 127 STADETVERLREMVRPFIEAPRDRILSDLLPQIAFEATNLATGFISELPVLMSQFFVAIM 186 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 ++ G S + + + K+ + F + ++ GL+ Sbjct: 187 ITYYLLIGGSSAVKGFLLILPE--RELMNYFMGELNKIYNNLFNVYLLTSLITGLLAAIG 244 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + L GV G+ TAI A++P G PI F + IY L+ GN + LF++ I + Sbjct: 245 FALFGVSYPFLWGLTTAIFALLPMIGPPIIFVPICIYFLLIGNYLSGIGLFIYSLIFINT 304 Query: 292 V-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + +RP L K+ T + +G LG IGP+L + ++ + +K Sbjct: 305 IPENVIRPKLASQGAKIHPSITLLAFAAPIFVVGFLGFIIGPLLYGFLLAAFRTRVYMLK 364 Query: 351 ENKEKISSNF 360 E Sbjct: 365 EEGAIDEKEL 374 >gi|152992929|ref|YP_001358650.1| hypothetical protein SUN_1340 [Sulfurovum sp. NBC37-1] gi|151424790|dbj|BAF72293.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 359 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 128/340 (37%), Gaps = 8/340 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I ++ +S K F A + +II P+ + + + I TV V+ Sbjct: 22 IIALVVYLSYLIAKPFMAVTVWGIIIAVGIAPLVNMLEKRFGHRKKIIIAI-TVMVIAGL 80 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 I+P L + ++++ + P + + P G LW + Sbjct: 81 ILPTYALSGKTIETSEKIIHSMKDGEITIPPPTEKVKEWPVIGEKTYTLWNNASHDLKKT 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K + G +F+ + ++ F + L Sbjct: 141 LKPFSKEIKNGITALLSSLGGLIGTVFM-----FVVSMLIAAAFLIGSEGAVKFYKDLSR 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L +++ +RS G+ +AI + + L GVP + VI + + Sbjct: 196 RLMGDKGNDWAKLSTLTVRSVVNGVLGVAIIQAIFALIGLTLMGVPLAIVWAVIIMFLTI 255 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I A I + +Y+ +G+ ++ + + D L+P L+G + +P L Sbjct: 256 IQLPALIIILPIILYVFSQGSGTAEVVFTIY-MLIVGASDGVLKPMLMGRGVDVPMLVIL 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +GG+ MG++GLF+G V+ AL ++ I +KE++ Sbjct: 315 IGAIGGMMLMGMIGLFVGAVIFALAYTLFGFWIAEVKEDE 354 >gi|284037625|ref|YP_003387555.1| hypothetical protein Slin_2741 [Spirosoma linguale DSM 74] gi|283816918|gb|ADB38756.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 355 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 134/335 (40%), Gaps = 20/335 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y L G+ + L A I+ P +++ K+ + + + + + + + I+P L L Sbjct: 26 IYGLSGYISAFLGAGILYVVFRPWFTALAIKRHWNKSLVTTLLIIFSIVVIIMPFLTLSL 85 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ +QH + + L+ Q + L Sbjct: 86 LLID-------RIQYYSQHTEDILNLAKK-----------AEELTGYQITSQENIQNLLR 127 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G + R LD+ + + M ++F + L K++ Sbjct: 128 QGGSYASRLLPSLAGGALDFIVILGLMFFTMYFMFVQQEGFQAGLQKYLP-FKKDTQKEL 186 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + + + +G ++++ +G++ G+ W+ GVP + G + MA IP G P+ + Sbjct: 187 GESLKNNVNANVIGQALVSLVQGVLTGATLWIFGVPDALFWGTVAFFMAFIPVLGTPLVW 246 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L +GN + + G + + +D LR L + L T G+V GV Sbjct: 247 GPAGLIQLSQGNTSQGIGILVVGVVVIINIDNLLRIMLAKRMGDIHPLVTLAGIVLGVPI 306 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+LGL +GP+L++ V+ + K+ +++++ Sbjct: 307 FGILGLVVGPLLLSYFIVLMQVFERQNKQQEKEVA 341 >gi|115376481|ref|ZP_01463715.1| putative membrane protein [Stigmatella aurantiaca DW4/3-1] gi|115366484|gb|EAU65485.1| putative membrane protein [Stigmatella aurantiaca DW4/3-1] Length = 396 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 124/332 (37%), Gaps = 6/332 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 FF A ++ + + + A + V + + P+ L + + Sbjct: 33 SPFFEAFFLAAVLAGAFQGMQTWLTRRLRGRRGLSAGLICVGFVFALLAPIAALTAFIVS 92 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTNG 145 E+ + V V Q+ + ++ +PG + L + + L + + + G Sbjct: 93 EVIKGVQFVAGIIQNRG-LEGLMTYVPGRLQGPVGRLLDRFQAESAGLWQTLQEQVSSQG 151 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + M+IA +F +G + ++S+ L ++ Sbjct: 152 ATAAHTFGGLVAA-TGSLAFQAVMMLIAFYFLLVEGKQLVAWIESVSP-LRRGQTTELLT 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V RS A + L +++ GVP V +T A+IP GA + A Sbjct: 210 EFRGVTRSVLSSTLATAGVQALAALVGFFITGVPVPVFFAAVTFFFALIPAIGAAVVCVA 269 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ LL G+ A L LWG I + + D ++P L + + FF L+GG+ G Sbjct: 270 AAVLLLATGHPVAALVLALWGIIVVGLADNVVKPLLARRGMNMHGAIVFFALLGGLAVFG 329 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL +GP+++A + + ++ Sbjct: 330 AIGLLLGPLIVAFFLSVVRIYQRDYGRTSARL 361 >gi|167626468|ref|YP_001676968.1| hypothetical protein Fphi_0251 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596469|gb|ABZ86467.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 339 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 124/326 (38%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I I + ++ L F +L A ++ P+ + + + + + ++ Sbjct: 11 IICIIGALVMWVLYPFVYSILFAGLLAIILAPLQEYLEQHIGKHRS--SFLLVMGILLCV 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P+L + YY + E+ + +Q + + IP + + +H Sbjct: 69 FIPILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIP---YIGSILQEHFDKLIKAI 125 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +N +P+ G + + + ++ ++ F ++ + + Sbjct: 126 NDDSDTIISNLGQILPKV-RYVGSTSISFITDFLITLLLVYQFLVSSSTLEKFAKKVVLK 184 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F R L + + A G V+ + L G+P+ + L AI +MI Sbjct: 185 DFDDS-DSFISTAIITTRRVSLAIFLTASLVGTVMAIVFLLTGMPTPILLAFTVAIASMI 243 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ ++L F + Sbjct: 244 PFMVGIVYILIGASVFVVYGATKAIIILVVGFALNIFTDNIMQPKIINKQVQLSFAASLI 303 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG++ G +G+F+GPV+ + V Sbjct: 304 GILGGIQAFGFIGIFLGPVIFNVTFV 329 >gi|310819639|ref|YP_003951997.1| hypothetical protein STAUR_2366 [Stigmatella aurantiaca DW4/3-1] gi|309392711|gb|ADO70170.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 390 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 124/332 (37%), Gaps = 6/332 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 FF A ++ + + + A + V + + P+ L + + Sbjct: 27 SPFFEAFFLAAVLAGAFQGMQTWLTRRLRGRRGLSAGLICVGFVFALLAPIAALTAFIVS 86 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTNG 145 E+ + V V Q+ + ++ +PG + L + + L + + + G Sbjct: 87 EVIKGVQFVAGIIQNRG-LEGLMTYVPGRLQGPVGRLLDRFQAESAGLWQTLQEQVSSQG 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + M+IA +F +G + ++S+ L ++ Sbjct: 146 ATAAHTFGGLVAA-TGSLAFQAVMMLIAFYFLLVEGKQLVAWIESVSP-LRRGQTTELLT 203 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V RS A + L +++ GVP V +T A+IP GA + A Sbjct: 204 EFRGVTRSVLSSTLATAGVQALAALVGFFITGVPVPVFFAAVTFFFALIPAIGAAVVCVA 263 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ LL G+ A L LWG I + + D ++P L + + FF L+GG+ G Sbjct: 264 AAVLLLATGHPVAALVLALWGIIVVGLADNVVKPLLARRGMNMHGAIVFFALLGGLAVFG 323 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL +GP+++A + + ++ Sbjct: 324 AIGLLLGPLIVAFFLSVVRIYQRDYGRTSARL 355 >gi|296127433|ref|YP_003634685.1| hypothetical protein Bmur_2416 [Brachyspira murdochii DSM 12563] gi|296019249|gb|ADG72486.1| protein of unknown function UPF0118 [Brachyspira murdochii DSM 12563] Length = 378 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 142/340 (41%), Gaps = 12/340 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--------TFLAVI 65 I I + LK F + A++ P++ + K + LA++ Sbjct: 13 AFIFLSIFIMYKLLKPFGMIIFFAVVFYVVLNPLFIKAMGKSYKKKDKLSAIKKNTLALL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +++ + +F+VP L Y ++++ + +S + + + V L + + L Sbjct: 73 FSLTSLIIFLVPTSILAYTIIVQLID-ISNIGIKYFMNLDVNEVLRNSNINNFLKSLPID 131 Query: 126 HLSHPQSLKILSETFLK-TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +I + T ++ + + + S IFM+ +LFFF+ DG + Sbjct: 132 VSMETILKRIQDSSLSNLTFISSYLTQNVASLLKSTGGFVSSFIFMMFSLFFFFIDGEYL 191 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +Q+ +L + Y+ ++ + V + I+ G + +G+ Y + GV + Sbjct: 192 MEQVRTLVP-IERKYFDRLIKQVSEGIKGIVFGNLFTGLFQGVCAFIVYSVFGVANSFTF 250 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +T I + +P G I + + + +I G + A + + I D +RP L+G Sbjct: 251 AFLTIIASFMPIIGTTIIWLPLGVLFIINGQLIKAIIFVICSWFFITIPDNFVRPLLLGN 310 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I+L L FF ++GGV GL G+ +GP+ L I K Sbjct: 311 RIELHPLFIFFAILGGVLFFGLSGIILGPLTFILFFEIMK 350 >gi|76801595|ref|YP_326603.1| permease [Natronomonas pharaonis DSM 2160] gi|76557460|emb|CAI49038.1| predicted transporter (predicted permease) [Natronomonas pharaonis DSM 2160] Length = 414 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 16/309 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + VL ++ + P+ + AV +V+ + F++PLL + + E Sbjct: 34 PYLEYVLLGAVLAYVLLPVQRRLEAHVG--RLVAAVSISVATVLAFLLPLLTVLAIALRE 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + + D+PG E T +L E + + I Sbjct: 92 AVAVATALQRG----------VVDVPGIELWVEETTGFEVDLVNLYSTYEGQI-ASAIQS 140 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I A R + + + LF RD + L + + +++ R + Sbjct: 141 IVTRAMRVVGGIPSLLIGLTVTVFVLFALLRDRGKLLAWLYRVLP-VDDGVQQELFRELD 199 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 +++ ++ +G +A + ++LG A L VP V L V T +++++P GA + VS+ Sbjct: 200 RLMWASVVGNVAVAAIQAVLLGVALVLLDVPVVVFLTVTTFVLSLLPLVGAFGVWVPVSV 259 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL + A L ++G++ + + D RP L+G L G+ GG+ G +G Sbjct: 260 YLAVADRPTAAALLVVYGSL-VSLSDNYFRPALIGRSGALNPAIIVVGIFGGIVAFGAVG 318 Query: 328 LFIGPVLMA 336 LFIGPV++ Sbjct: 319 LFIGPVVLG 327 >gi|32490775|ref|NP_871029.1| hypothetical protein WGLp026 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165981|dbj|BAC24172.1| yb1688 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 356 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 67/339 (19%), Positives = 139/339 (41%), Gaps = 7/339 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I F++ L F + A II ++WP++ S ++ + ++C Sbjct: 18 IFIFFVLYGCFLILNPFIISFIWASIIVISTWPLFIRIKKFLYNSYFLSILLMEMLLICF 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI P+ + +++S ++ +Q+ + IP G + Sbjct: 78 FIFPVFIVSTSFFKNFSKMISLIITFDQYIFSNLLLIKKIPIIGNKLFNTINILIYEKNL 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T+ I + +F + L+++F I F Y G I++ + Sbjct: 138 SLYEKLEPYITHITKIILSNLTLIWNLFFNCLLTVLFSI----FLYFKGNYINKFIKIFI 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ K++ + K IRS F+ + + +I + ++ +++ VP L ++ I Sbjct: 194 YYIDDIKGKELVVLAEKSIRSVFVSVILASIIQTILSSIGLFISNVPFKSILIILIFIFC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLP 311 + G F + ++ K N +T LF+W + +F +D L+ L+ IKL L Sbjct: 254 ITQLGIFPIFIPIILWFYYKENYIFSTILFVWSCL-VFALDNILKQILIKSIGIKLHNLL 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FG++GG + G++G+FIGP ++ + + + K Sbjct: 313 IIFGILGGFLSFGMIGIFIGPTILTISWNLLRNLTFNYK 351 >gi|237803518|ref|ZP_04591103.1| lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025500|gb|EGI05556.1| lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 7/198 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ ++ M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMSLCWMLLVAAPLVWL 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIP-GGMWASELWTKHLSHPQSLKILSET 139 + +++ + G+P P+WL+ IP G +WT + + Sbjct: 79 GFNLADHVRDATGLIKNIQVDGLPDPPQWLAGIPLVGERLVGIWTTIDQQGAAFMTTVKP 138 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +L G + R A + G L+ LSIIF FFFYRDG ++ + SL E L Sbjct: 139 YLGEVGNWLLARSA-QIGGGILELTLSIIFA----FFFYRDGPRLAAFVLSLLERLIGDR 193 Query: 200 WKKISRIVPKVIRSTFLG 217 + +V ++ G Sbjct: 194 AQYYLDLVAGTVQRVVNG 211 >gi|134045617|ref|YP_001097103.1| hypothetical protein MmarC5_0574 [Methanococcus maripaludis C5] gi|132663242|gb|ABO34888.1| protein of unknown function UPF0118 [Methanococcus maripaludis C5] Length = 321 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 125/329 (37%), Gaps = 21/329 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F Y L F + A+ + + + P+Y K S + + ++ Sbjct: 2 IFSFFALSYMLWPFIGIIALAVAVAYMTKPLYDVLKPKLGRSYGA------IFCLLGIVI 55 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P L L ++ + + + + V LSD+ +L P S Sbjct: 56 PSLLLVTLVAEDVITFLLSL-DIDSIMLQVTPILSDM-----------GYLGVPPSDVSQ 103 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + A++ + ++F+ F+F +DG I Sbjct: 104 PVSDIWGVSKPLLNNLATQI-SAVPSLLMRLLFLSFMTFYFLKDGDKIKDSFLLYIPKEK 162 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + K +++ F+G + ++ G + YWL G+P+ + LG ++ I+ ++P Sbjct: 163 KRNTLLFVNEIHKALKTLFIGNVVTSLIVGFISIIGYWLIGLPNPITLGALSGILNILPV 222 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFF 314 G + +++Y L+ G L +G + L + D +RP ++ L Sbjct: 223 VGGWTIYVPLTVYYLLTGEFTKGILLGFFGIVFLSLAPDFAIRPRVISKDGDLHPALVLI 282 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G+ GL IGP+++AL+ I K Sbjct: 283 AFLIGPLVFGIPGLAIGPIIVALVYAIHK 311 >gi|209809760|ref|YP_002265299.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011323|emb|CAQ81774.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 355 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 133/340 (39%), Gaps = 9/340 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++L LK F V+ II +PI + + S + +++ T ++ + Sbjct: 23 LSVLVLWCFSILKPFLLLVVWGGIIATALYPIVAFISKRTSVSESKVSIGLT--IIGVLF 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 +PL+ + EL + + + P G A + S+ +SL Sbjct: 81 IPLIAVSTGIYTSGSELFLGYQDGSIAIPKPNVAMQEWPLIGHKAYAFMLQASSNLESLL 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +K A G F+ + +S I + F + + + + Sbjct: 141 FKYSSEIKVVAGK-AASLAGSLGFGFIQFIVSTIISGV----FMANAAKCERAFILVTDR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + K ++ + +RS G+ +A+ + ++ G L GVP+ ++ ++A+I Sbjct: 196 LTGEHGKALTALSRTTVRSVVQGVIGVAVIQAIMAGLGMALVGVPALGLWVLLVLLVAII 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 ++ V Y+ A +W + + D L+P L+ +P + Sbjct: 256 QLPPILALLPVIFYVFSVDTTTTAVIFLIWC-LLIGSSDAILKPILLSRGSDIPMIVILL 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ G++GLF+G V+++L ++ + + + Sbjct: 315 GALGGMAMSGIVGLFVGAVVLSLTYRLFMVWLENEDKENK 354 >gi|300934058|ref|ZP_07149314.1| hypothetical protein CresD4_08309 [Corynebacterium resistens DSM 45100] Length = 566 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 14/300 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PVL +LI+ WP+ + K + + + + L + + + + Sbjct: 169 ILPVLLSLIVCTVLWPV-VRTLRKFKIPNGIAVALTILGFFALIGGIFAAIAPSAVEQSR 227 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L ++ V +WL P + S+ + L+ S I Sbjct: 228 KLATQANDGIGE---VRQWLQGPPVNLQESQFEDAVNQATEWLQQKSGD---------IA 275 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A+ L +++ M++ FFF +DG L + + ++ Sbjct: 276 SQAAAGASATLSALVTLFIMLVLTFFFLKDGEKFLPMLRRVTGRRVGWHLTEVLTRCWNT 335 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + I++ + +G + VP AL ++T IP A+S+ + Sbjct: 336 LSGFIRTQAIVSFIDAFFIGLGLVILDVPLAGALAILTFFGGFIPMVGAFVAGALSVLIA 395 Query: 271 IKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + N+ A + + L+P L + + + + G G++G F Sbjct: 396 LVAINVQTALIVLAIVVAVQQLEGNILQPLLQSRAMDIHPVIVLLSVTLGSTLFGIIGAF 455 >gi|225873136|ref|YP_002754595.1| hypothetical protein ACP_1510 [Acidobacterium capsulatum ATCC 51196] gi|225791352|gb|ACO31442.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 353 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 68/326 (20%), Positives = 134/326 (41%), Gaps = 13/326 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 A ++ AL++ + P+ + A + ++ + I+ L + + Sbjct: 34 AAIVGALVLAVATQPLLRWLRKRLAN--ATAAASIALFIVAIGIILPGALLARILGQYAV 91 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + + + L+ P + ++ L+ + + F+ Sbjct: 92 AIGAALSNGAVEAAIRQALNHHPQLAALLQHGSRFLTWNNAAER---------AGTFLSA 142 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A + I+ M+ LFF YRD + + L S+ + + + I Sbjct: 143 HAINLLSNSIAALTQIVVMLFLLFFLYRDSRAAVRALYSVLP-MQQKEALMLVTSMEGTI 201 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 R+TFLG +A +G+V G + + V LG++TA+ AM+P GA + + V++YL Sbjct: 202 RATFLGHLAVAAIQGIVAGIVFAILRVTGAAPLGMLTAVAAMVPSFGAYVVWLPVAVYLG 261 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + G + A L + GA+ + +D L P LVG ++ L+GG+ G+ GL + Sbjct: 262 LAGRLIPAILLIVIGALIISTLDNLLYPLLVGAQLRQHPAIILLALLGGIWMFGIAGLVL 321 Query: 331 GPVLMALIAVIWKESIMAIKENKEKI 356 GPVL ++ + + + E I Sbjct: 322 GPVLFSVAMALLRIWHERSQAGVEAI 347 >gi|51244045|ref|YP_063929.1| hypothetical protein DP0193 [Desulfotalea psychrophila LSv54] gi|50875082|emb|CAG34922.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 365 Score = 129 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 135/352 (38%), Gaps = 6/352 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLY--FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + P I ++++F I L F++ ++ + ++ P+Y + + Sbjct: 12 KPLPGPMRIKYFLLVFAIAFFFLGRILWPFWSILVLSFLLVNIFQPVYLFLSKQLP--RS 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + ++ L PLLF E + V + + Sbjct: 70 VASGLTCLMIIALVFFPLLFFTGALTGEALSFYNWVRDSQVWMRFQDFIQQSQFITRMQA 129 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + S + G F+ AS + L MI+ +FF + D Sbjct: 130 PLKDFGIDFQPAQITASLAYFAKAGGLFLYDQASSWAANILQSVALFFIMILVIFFLFMD 189 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L L L + + + ++ + G I I +G++ G + + +PS Sbjct: 190 LLRLKEFLFKLSP-LPEDENRLLVKKFEEIANAILKGSGICGIIQGIIGGVLFSIMHLPS 248 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G I +++A +P G + ++ L I G A+ L + + ++ ++P Sbjct: 249 PILWGCIMSVLAFLPIFGIGLVMLPAALALAIDGQTATASSLVISYLVLSLGMEYLIKPK 308 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVG +++ L F ++GG+ G+LG+ GP+++ + + + Sbjct: 309 LVGSQVEMHTLLVFLSIIGGISVYGILGIIYGPLIITAFLTLSNIYLRRYDQ 360 >gi|212702630|ref|ZP_03310758.1| hypothetical protein DESPIG_00658 [Desulfovibrio piger ATCC 29098] gi|212673902|gb|EEB34385.1| hypothetical protein DESPIG_00658 [Desulfovibrio piger ATCC 29098] Length = 367 Score = 129 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 122/288 (42%), Gaps = 18/288 (6%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWL-------SDIPGGMW 118 V + ++P+ L ++ ++++ + +P W+ + Sbjct: 81 IVMIFSAVVIPISTLVLLVSPQVAGGLARLRELQANNFQLPPEWVMRFQELRHSLADYPK 140 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ ++ LS+ ++ + L +D + + +FL L++IF A Sbjct: 141 VDKMISEFLSNLDAMLADTMGLLINRSVDVLGGTMTVLWTLFLFVTLTVIFAAYA----- 195 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 S + + H+ ++ + + ++ LG+ ++AI +G++ G + +AG+ Sbjct: 196 ----SRINLITARIFHIPATMLRRFVLAIRRALQGVMLGIVLVAIAQGVLCGIGFAVAGI 251 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 G++ ++A IP G + + + + L G A L LWG + + VD LR Sbjct: 252 KQPAFWGLLATVVAPIPFVGTALVWGPLCLSLWFSGATMPAVGLALWGTLAVTSVDNILR 311 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P + I PF ++ G+ + G +GL IGPVL+A+ +E+ Sbjct: 312 PLFLQQGINAPFFVLIIAILCGLGSFGPMGLIIGPVLLAIAMQAVEEA 359 >gi|260204344|ref|ZP_05771835.1| hypothetical protein MtubK8_08558 [Mycobacterium tuberculosis K85] Length = 342 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 7/311 (2%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--N 100 P++ F + ++ A +S + +VP+ L ++++ +V V Sbjct: 1 MFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRT 58 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + G++ + +L+ + + G + F Sbjct: 59 TDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLH-FLRDAAGSL 117 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 S I + + + + L L + + ++R T G + Sbjct: 118 AGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFV 176 Query: 221 IAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 IA +G+ ++ ++AG ++ +++IP G I I ++ GNI Sbjct: 177 IAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAWGI 236 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 237 FVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIV 296 Query: 340 VIWKESIMAIK 350 + K Sbjct: 297 TTIDVYLAVYK 307 >gi|295135659|ref|YP_003586335.1| hypothetical protein ZPR_3833 [Zunongwangia profunda SM-A87] gi|294983674|gb|ADF54139.1| membrane protein, UPF0118 [Zunongwangia profunda SM-A87] Length = 339 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 125/330 (37%), Gaps = 23/330 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P L+ ++ T + + +S++ K + A + ++P+ + Sbjct: 29 LVPYLTGILGAITLYVLMASWMEKLLKKGWKPSVAAGVLMFGSFIGILIPVSGIIIMLTS 88 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + V+ + +S I + E + + + Sbjct: 89 KIGKAVNNSEMV----------VSAIKKQLQHLEEYVGYDITGA--------IDTSAISG 130 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ + +++ M L+F + + L L A I++ Sbjct: 131 WVSEKLQNLAGGTFNVFVAVGLMYFMLYFMLINREKMKTALIDYIP-LGKANLSTIAKES 189 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 +++S LG+ ++A +GL+ Y + GVP ITAI +MIP G I + Sbjct: 190 NLLVKSNALGIPLVAFVQGLIALIGYLVLGVPDPFFWFGITAIGSMIPFIGTAIGIAPTT 249 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I L G + L ++G + + D +R ++ K+ L T G++ GV+ G + Sbjct: 250 ILLFADGQNWQGVALLIYGIVVVGSTDNLIRIMVLDRLAKVHTLITLVGVIVGVQIFGFI 309 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GL GP+L++L +I K +++ Sbjct: 310 GLIFGPLLVSLFLLILKIYKKEYGNENDRL 339 >gi|87312173|ref|ZP_01094276.1| probable permease [Blastopirellula marina DSM 3645] gi|87285098|gb|EAQ77029.1| probable permease [Blastopirellula marina DSM 3645] Length = 523 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 98/191 (51%), Gaps = 6/191 (3%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++F+ DG ++ L L Y +++ +V R+ L + A+ +GL+ G +W Sbjct: 330 YYFFFDGPALISAAMRLSP-LDDEYERQLIEEFSQVSRAVVLATLLSALAQGLLAGIGFW 388 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN-IFNATCLFLWGAIELFIV 292 G+ S L +T +AM+P GA + VS++L++ + L ++G + +V Sbjct: 389 FCGLESVFLLMFLTMTLAMVPFLGAASVWVPVSVWLIVAEERLAAGVGLAIYGVAVISLV 448 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA---LIAVIWKESIMAI 349 D ++PF++ G KL L ++GGV +G +G+ +GP+L+A ++ + + ++ + Sbjct: 449 DNIIKPFVLHGQSKLHPLLALLSVLGGVSALGPIGILVGPMLVAFMQVLLNMLRGELVKM 508 Query: 350 KENKEKISSNF 360 E ++ +N Sbjct: 509 GEAEDAKDANL 519 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M P+ W ++ I+ V+ +F + F P+ A I+ P++ + K + + Sbjct: 1 MSLPKMFSFWALLAIVGVAAFFTYQVMSIFLVPMFLAAILVVIFRPLHDWIVEKFKGRNA 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 A T+ ++ + + PL+ +F + E +LV Sbjct: 61 LAAGATTLIILLIVLAPLIGIFSMAIKETIDLV 93 >gi|225621492|ref|YP_002722751.1| hypothetical protein BHWA1_02594 [Brachyspira hyodysenteriae WA1] gi|225216313|gb|ACN85047.1| predicted transmembrane protein of unknown function [Brachyspira hyodysenteriae WA1] Length = 372 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 139/342 (40%), Gaps = 12/342 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------STFLAVI 65 I I + L+ F + A++ P++ + K + LA++ Sbjct: 13 AFIFLSIFIMYKLLRPFGMIIFFAVVFYVILNPLFIKAMGKSYKKTDKLSIIKKNTLALL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F+VP L Y ++++ + +S + + + V +++ + L Sbjct: 73 FSLISLIIFLVPTSILAYTIIVQLID-ISNIGIKYFMNLDVNEVINNSNINNFLKSLPID 131 Query: 126 HLSHPQSLKILSETFLK-TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +I + T ++ + + + S IFM+ +LFFF+ DG + Sbjct: 132 VSMETILKRIQDSSLSNLTFISSYLTQNVAGLLKSTGRFVSSFIFMMFSLFFFFVDGEYL 191 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q+ +L + Y ++ + V + I+ G I +G Y + GV + Sbjct: 192 IGQVRTLVP-IDEKYLDRLIKQVSEGIKGIVFGNLFTGIFQGFCAFIVYTVFGVTNSFTF 250 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +T I + +P G I + + I LI G I A + + I D +RP L+G Sbjct: 251 AFLTIIASFMPIIGTTIIWIPLGILFLINGEIIRAIIFIVCSWFFITIPDNFVRPLLLGN 310 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I+L L FF ++GGV GL G+ +GP+ L I K Sbjct: 311 RIELHPLFIFFAILGGVLFFGLSGIILGPLSFILFFEIMKIY 352 >gi|320535789|ref|ZP_08035870.1| hypothetical protein HMPREF9554_00591 [Treponema phagedenis F0421] gi|320147337|gb|EFW38872.1| hypothetical protein HMPREF9554_00591 [Treponema phagedenis F0421] Length = 365 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 121/334 (36%), Gaps = 9/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIATVSVMCLFIVPL 78 + + + I+ P+Y+ I+K + FLA V + + L Sbjct: 26 LFLPYATVLFWSAILYILISPLYNKIIAKMNPEKKWFNLTRRFLAGTFAVGTVVIVAAVL 85 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 LF+ + + K L ++ L + +L L Sbjct: 86 LFIVIKLVGQGKALFQRISLFLIDHNELFFNFDKEALNELVIKLSMGTLDISAIDIKKEV 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + +S++F L+FFY DG + S+ + Sbjct: 146 MNFLSQYSSNLLGYTRTLFANMGLFAVSLVFTCFTLYFFYIDGHYLLNLFISIMP-IKAD 204 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 K+ +V + G+ +++ + ++ Y + V + L ++T + +P G Sbjct: 205 ASTKLLNKFNEVTTNLLKGLFLVSFYQCIISLIIYLIFKVEGALLLAILTFFSSFLPLVG 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + I + + L + +D LRPF + IK+ L FF ++ Sbjct: 265 CAFVWFPIGIGICLLEGWLKGIIFLLVAGTLISFMDNFLRPFFLKDRIKIHPLLIFFSML 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GGV+ +G G+ +GP+++ L I + + KE Sbjct: 325 GGVQMLGFNGIILGPMIVILFFTIIDIAHDSEKE 358 >gi|300711171|ref|YP_003736985.1| hypothetical protein HacjB3_09050 [Halalkalicoccus jeotgali B3] gi|299124854|gb|ADJ15193.1| hypothetical protein HacjB3_09050 [Halalkalicoccus jeotgali B3] Length = 326 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 132/337 (39%), Gaps = 24/337 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + + L+ LY L F VL+A+++ + P++ + V Sbjct: 1 MNKQRGFLLLAVCLSFLLGLYVLLPFLEYVLAAILLAYVLHPLHVRLAPRIGPR--LSPV 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + P ++F + +++ + A + G+ V I Sbjct: 59 VLIGFSLVAVVAPFAYVFAALVRDLR-----AIAAGESGLRVAEVEGTI----------A 103 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ +T A FG L + ++ L++ +DG Sbjct: 104 TYTGRSVDLERWIRVGAETIFEVSFSGLAELFGA-ALKASFGLALVLFLLYYLLKDGACF 162 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L P ++ + + +G +A +G+ G LAGVP V Sbjct: 163 VAWLKETTP-LPPDVTDRLYCRIDATTWAVIVGHVFVAFVQGMAGGIGLLLAGVPDPVFW 221 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + ++A++P GA + + +YLL+ G+ + L ++G + + ++D +RP ++ Sbjct: 222 TAVMILLALLPLIGAFLVWAPAGVYLLLIGHPYAGLFLLVYGIVVVSMIDNYVRPIIIDA 281 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +L G+ GG+ ++G F+GP+ + ++ Sbjct: 282 RARLNPGVILVGVFGGIYSLG----FVGPIALGVLGA 314 >gi|289582606|ref|YP_003481072.1| hypothetical protein Nmag_2958 [Natrialba magadii ATCC 43099] gi|289532159|gb|ADD06510.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 339 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 147/357 (41%), Gaps = 22/357 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + +++ +S + F VL A+++ F +P+ S S A+ Sbjct: 1 MNISKGYLLTLVLIFAYLSWQLVVPFLQYVLLAVLLAFLLFPLQQRLESYV--SPMLAAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + FI+P L + + L+ + + + D Sbjct: 59 SLVLLAIIGFIIPFLLIVAVVADDAANLLESLDAETLQVSELESTIED------------ 106 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I + F+ A+ + + + L++ ++G ++ Sbjct: 107 --QTGMEVDLIETAADSAQEVGTFVLEQATAWFSALTHALIGFGLALFLLYYLLKNGDNL 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + L + + V+ + +G +IAI EG++ G A + G+P+ Sbjct: 165 LEWIREVTP-LPMDVQDDLYGELSDVMWAVLVGHVLIAIIEGVIAGLALFAVGIPNAAFW 223 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I I++++P GAP+ + SIYL++ G A L ++ AI + + D LRP +V Sbjct: 224 TFIMVILSLVPLIGAPLVWIPASIYLVVIGEPLLAAGLAVYSAIVVGVSDDYLRPVVVDR 283 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 ++ G++GG+ G++GLF GPV++ + + I + E ++++ + Sbjct: 284 YAEISPAVIILGVLGGIYAFGIMGLFFGPVVVGALITV----IEVLDEEYDRLAEEY 336 >gi|15679222|ref|NP_276339.1| hypothetical protein MTH1211 [Methanothermobacter thermautotrophicus str. Delta H] gi|8928484|sp|O27279|Y1211_METTH RecName: Full=UPF0118 membrane protein MTH_1211 gi|2622321|gb|AAB85700.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 334 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 137/354 (38%), Gaps = 23/354 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E + + +M ++L+S + + + + + P+ + S Sbjct: 1 MIERLRGALASASFPVMALLLLSAIVVYPLWTMLFLGAVFAYIVRPVALRINRRIPYLS- 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + M + I+PL+ + + + + + P L+ A Sbjct: 60 ----VSIILAMIVVIMPLVGILVFTVDSII-----------NSAPSLLSLAGSIHVPGAG 104 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + +L+ + L + + L + + + F+F RD Sbjct: 105 NLQPSAENTLANLRTVLRDILSGSLNYVVA-----ILQSVPMISLQLFVFLSSTFYFARD 159 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + +L + ++++ +V+ S F G + A+ GL+ + L G P Sbjct: 160 GKRLVGYIRTLIPEETRPFMERMASETERVLLSIFYGHFLTALAIGLMAAVGFHLLGYPY 219 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++T + +IP G ++T +SIY + GNI + ++G + L +D LRP Sbjct: 220 AILLGIMTGLFQLIPVIGPWAAYTPLSIYDFVTGNILRGVLVLIFG-LFLSTIDIYLRPK 278 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G + + G +GG G+ G +GP+++ L + M + Sbjct: 279 LSGKYADIHPMIFLVGFLGGPVVWGVAGFIVGPLVLGLAYAALEAYRMESGGEE 332 >gi|31792294|ref|NP_854787.1| hypothetical protein Mb1131c [Mycobacterium bovis AF2122/97] gi|31617882|emb|CAD93992.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length = 342 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 7/311 (2%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--N 100 P++ F + ++ A +S + +VP+ L ++++ +V V Sbjct: 1 MFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRT 58 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + G++ + +L+ + + G + F Sbjct: 59 TDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLH-FLRDAAGSL 117 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 S I + + + + L L + + ++R T G + Sbjct: 118 AGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFV 176 Query: 221 IAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 IA +G+ ++ ++AG ++ +++IP G I I ++ GNI Sbjct: 177 IAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGI 236 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 237 FVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIV 296 Query: 340 VIWKESIMAIK 350 + K Sbjct: 297 TTIDVYLAVYK 307 >gi|121637032|ref|YP_977255.1| hypothetical protein BCG_1161c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989505|ref|YP_002644192.1| hypothetical protein JTY_1134 [Mycobacterium bovis BCG str. Tokyo 172] gi|260186029|ref|ZP_05763503.1| hypothetical protein MtubCP_08383 [Mycobacterium tuberculosis CPHL_A] gi|121492679|emb|CAL71148.1| Conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772618|dbj|BAH25424.1| hypothetical protein JTY_1134 [Mycobacterium bovis BCG str. Tokyo 172] Length = 342 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 7/311 (2%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--N 100 P++ F + ++ A +S + +VP+ L ++++ +V V Sbjct: 1 MFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRT 58 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + G++ + +L+ + + G + F Sbjct: 59 TDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLH-FLRDAAGSL 117 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 S I + + + + L L + + ++R T G + Sbjct: 118 AGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFV 176 Query: 221 IAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 IA +G+ ++ ++AG ++ +++IP G I I ++ GNI Sbjct: 177 IAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGI 236 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 237 FVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIV 296 Query: 340 VIWKESIMAIK 350 + K Sbjct: 297 TTIDVYLAVYK 307 >gi|289573754|ref|ZP_06453981.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis K85] gi|289538185|gb|EFD42763.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis K85] Length = 355 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 109/312 (34%), Gaps = 7/312 (2%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-- 99 P++ F + ++ A +S + +VP+ L ++++ +V V Sbjct: 13 LLFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVR 70 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + G++ + +L+ + + G + F Sbjct: 71 TTDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLH-FLRDAAGS 129 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 S I + + + + L L + + ++R T G Sbjct: 130 LAGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQF 188 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 +IA +G+ ++ ++AG ++ +++IP G I I ++ GNI Sbjct: 189 VIAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAWG 248 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 249 IFVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILI 308 Query: 339 AVIWKESIMAIK 350 + K Sbjct: 309 VTTIDVYLAVYK 320 >gi|118602640|ref|YP_903855.1| hypothetical protein Rmag_0639 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567579|gb|ABL02384.1| protein of unknown function UPF0118 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 360 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 153/357 (42%), Gaps = 24/357 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M ++ I ++ F + + +L+I T++ Y ++ SS A++ T+ Sbjct: 12 GFMLSLLFLAIGGLIWLFTPFISALFLSLMIAITTFSKYEQLQNRF--SSNNSALLTTLL 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVL---ANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + I+PL ++ LE+ L+ + ++ + + ++ +P + + Sbjct: 70 VTIVLILPLGYILLISTLEISTLIQTINHDLNFDKITQILNQTVTKLPLSDFIKNTLSST 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L++ L DF + + L +I +I L++FY DG I Sbjct: 130 LNNNL-------EALFIGVKDFSIVILKSIVSLSSHFILFLIIVIFTLYYFYIDGKKIVT 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ SL L + + + + +IA+ +G++ + G+P + G+ Sbjct: 183 RIKSLSP-LEAHLNNILLNQFKNLSITLVGSVFLIALLQGMIFSITIIIIGLP-ALYFGI 240 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGP 304 A+ + IP G I + +S+YL +G I +A + L GA+ + FIVD RP ++ Sbjct: 241 AMAMASFIPLLGGLIIWLPLSLYLYAQGQITDALIVALSGAVVIGFIVDNLARPSIIKFL 300 Query: 305 IKL--------PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 K L T + G+ G+LGLFIGP++ A+ I+ + +++ Sbjct: 301 SKKSNGTNTLDHTLITVLSTLSGIIQFGILGLFIGPIIAAMAISIFDIYSIRYNKDR 357 >gi|256810121|ref|YP_003127490.1| protein of unknown function UPF0118 [Methanocaldococcus fervens AG86] gi|256793321|gb|ACV23990.1| protein of unknown function UPF0118 [Methanocaldococcus fervens AG86] Length = 333 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 140/332 (42%), Gaps = 20/332 (6%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + +I+ +++V LY + F + + + + P+Y F K S A +A + Sbjct: 11 KGVIIGLLIVLLYIIWPFIDVLAYSCAFAYMALPLYKLFRKKF--SRAVSAGLA----LS 64 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 ++++P++ + Y + + + + + + + ++S + L+T + + Sbjct: 65 IYVIPIMVITIYALFAVIDFI-----FSFNINVIEEYISGV------FNLYTSSIFNGFV 113 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ FI + + + + +I +I F+F ++G + S Sbjct: 114 NEQTLTKYIDEFVKYFINQLSGKIFD-TGYLIIKVIMVIFITFYFLKEGDKAENVIISFT 172 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K + ++ F+ ++I ++ Y + GVP V+T I A Sbjct: 173 PNEYKEKMKIYLEYLHDSYKNLFISCVSLSIIITILSYIGYLIVGVPYAELFAVVTGIFA 232 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFL 310 ++P G + + ++IY I + A LF++G + L I D +RP+LV + + + Sbjct: 233 LLPILGGWMVYIPIAIYYFITHDYTKAIFLFIYGELMLSIAPDFVIRPYLVKKEVDIHPV 292 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++GL G IGP+++ + + Sbjct: 293 LVIVAFLMAPLSLGLSGFAIGPLVVGALNAFY 324 >gi|15669367|ref|NP_248172.1| hypothetical protein MJ_1177 [Methanocaldococcus jannaschii DSM 2661] gi|8928508|sp|Q58578|Y1177_METJA RecName: Full=UPF0118 membrane protein MJ1177 gi|1591804|gb|AAB99180.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 334 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 148/336 (44%), Gaps = 19/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I+ ++++ LY + F + + + + P+Y+ K + T A +A Sbjct: 7 KYVRKGVIVGLLIMLLYIIWPFIDVLAYSCAFAYMALPVYNILRKKF--NKTISAGLA-- 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++I+P++ + Y +L E++ + + + ++++I ++ S + + ++ Sbjct: 63 --ISIYILPIMTITIYALLTFMEII-----LSFNTKSIEPYINEI-LSIYNSFMLERIIN 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + Q + + F+K F + + +I ++ F+F RDG + Sbjct: 115 NEQIIAKYIDEFIKYLVSQFSGKII-----DVGYLIVKVIMVLFLTFYFLRDGDKAKNLI 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + ++ F+ ++I ++ Y + GVP +IT Sbjct: 170 ISFVPDEYKEKMRIYLSYLHDSYKNLFISCVSLSIIITILSYIGYLILGVPYAELFAIIT 229 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I A++P G + + +++IY + + A +F++G + L I D +RP+LV + Sbjct: 230 GIFALLPILGGWMVYISIAIYFFLIHDYTKAVFMFIYGELFLSIAPDFVIRPYLVKKEVD 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + ++GL G IGP+++ + + Sbjct: 290 IHPVLVVIAFLMAPLSLGLSGFAIGPLVVGALNAFY 325 >gi|254517038|ref|ZP_05129096.1| transporter, PerM family [gamma proteobacterium NOR5-3] gi|219674543|gb|EED30911.1| transporter, PerM family [gamma proteobacterium NOR5-3] Length = 377 Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 126/337 (37%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ +++ F +L +I+ + +P++ S + S A + V + L Sbjct: 25 LIVAVVIACERIFAPFLPIMLWGVILAVSLYPLFLSLCRRTRLSPGSNAALIVVLGILLL 84 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 VP + L + +++ + + D P G W+ + Sbjct: 85 GVPTVMLGSSFATHIFDVIGNFDASTYTVRAPNDAVKDWPIVGERVFAAWSSAYTDLPGF 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L AS G + + II ++ + G S + + + Sbjct: 145 IESLQPQLGNFSKSAAKAAASTAGTLLFFFGALIIAGVMMAY-----GESGTAAVGRIFA 199 Query: 194 HLFPAYWKKISRIVPK-VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + +RS G+ +A + L+ G + LAG P+ L ++T IM Sbjct: 200 RMVGGQKGPALHTITTLTVRSVATGVVGVAFIQALLFGVGFMLAGTPAAGLLALVTLIMG 259 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFL-WGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ A + V Y+ G+ + L I D L+P L+G + +P Sbjct: 260 IVQLPALLVSLPVIAYVWGMGDGGTVVNVALTIYFIIAGFSDNVLKPMLLGRGVSVPMPV 319 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ G++GLF+G V++++ ++ + Sbjct: 320 VLLGALGGMMGAGIVGLFVGAVILSVGYELFMGWVDE 356 >gi|73670231|ref|YP_306246.1| hypothetical protein Mbar_A2764 [Methanosarcina barkeri str. Fusaro] gi|72397393|gb|AAZ71666.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 346 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 135/345 (39%), Gaps = 8/345 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I + ++ Y + + ALI+ P+Y I + + F A++ + Sbjct: 9 LALLIIAVLTVLITYATLPYLNYIFGALILFIIFRPLYHFLIRRLKIRKQFAALLIIIIS 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +VPL FL + E+++L+ +L+D + ++ Sbjct: 69 IFVVLVPLYFLLNTIIDEIEQLLVNQASILASIEAGGHFLTD------SLLRLNIPINIF 122 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q+ L + +++ F + ++ M L++ + + S + S Sbjct: 123 QAKIEEKAMELASQAVNYTSLFIVESIQNLSHQSIGLLIMYFLLYYLFTEEDSDFMRQVS 182 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K++R+T + +A+ +G +L + + + G I AI Sbjct: 183 VAVPFNEENTATLLDEFRKIVRTTLIASGAVALVQGGILTIVFVIFNIQGAFLWGFIAAI 242 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +P GAP + +I + + L I + ++D LRP + ++ Sbjct: 243 LSFLPVVGAPFIWVPATIVQFFQKDYTA-AIAILAAGIFISVIDNFLRPIIQKRVGEIHP 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G+V GV GLLG+ IGP+L++ + + KE Sbjct: 302 FLSLLGVVIGVSLFGLLGIVIGPLLLSYFVLTVQMFSREYLSGKE 346 >gi|78486220|ref|YP_392145.1| hypothetical protein Tcr_1881 [Thiomicrospira crunogena XCL-2] gi|78364506|gb|ABB42471.1| Conserved hypothetical protein with DUF20 [Thiomicrospira crunogena XCL-2] Length = 367 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 19/370 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR +G + +++ ++ L+ F +L A+I+ ++ +Y + K ++S Sbjct: 1 MRSNAPYEEGFLIILLLTAVVGLLWLFSPFLEALLFAMILATATYSLYLKVLPKVKQSPN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + +V V I P+ +L L++ +VS+ P LS + + Sbjct: 61 YASAVMSVFVFVTVIAPVTYLLLEVGLQVGHIVSQAEQWLSQQT--PESLSQLNQNLVEV 118 Query: 121 ELWTKHLS-HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + L T D I + I + ALFFFYR Sbjct: 119 IPFPESTQMELIRQVKDNSDKLITFAQDTIMFLVKGIFGNTTSFITFIFLAVFALFFFYR 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG IS L L L Y I + L + +A+ +G V W G+P Sbjct: 179 DGHRISHHLKILSP-LENYYDTMIMTRFSNLSTILLLSVLGVALMQGAVFAIVAWFLGMP 237 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLR 297 + +G+ AI + IP GA + + ++ ++ +G+ A + +GA+ F +D +R Sbjct: 238 G-LFIGMAIAITSFIPIVGAALIWIPFALIMVAQGDYVAAGVVVFFGAVVNGFFIDNVVR 296 Query: 298 PFLVGG------------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L+ + L T G+ G++GLF GPV+ A+ I+ Sbjct: 297 PMLIQKISLSLGGASEELAVANHTLITVLSTFAGLIHFGMIGLFFGPVIAAMAITIFDVY 356 Query: 346 IMAIKENKEK 355 + ++ Sbjct: 357 AHKNSDLLDR 366 >gi|86133547|ref|ZP_01052129.1| protein of unknown function DUF20 [Polaribacter sp. MED152] gi|85820410|gb|EAQ41557.1| protein of unknown function DUF20 [Polaribacter sp. MED152] Length = 343 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 133/349 (38%), Gaps = 23/349 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF---ISKKEESSTF 61 ++ P+ I + ++ +I+ + P LS ++ T + + + + KK + Sbjct: 4 VIAPKIIRQVFVLLLIVFFAVLIFTELIPYLSGVLGAITIYVLLRKWMVILIKKNWNPDV 63 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ ++P+ + + ++ E V + R + G +S Sbjct: 64 AAILLMFLSFICILLPVTGIIFMLGEKIGEAVENSEEIARVVQNKIRTIESEYGYDLSSR 123 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + T+ +S +I F + + I M L++ + Sbjct: 124 INTEEIS------------------TWISSNLETFAGSTFNIFIGIGLMYFILYYMLTNR 165 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + K I ++RS +G+ ++AI +G++ + + G+ Sbjct: 166 RRLKDSLYEYIP-ISNKNLKIIGAESQAMVRSNAIGIPLVAIAQGIIALIGFLIFGIRDP 224 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +I I +MIP G I V I + GN A + ++G + + D +R FL Sbjct: 225 FFWFIIVTIGSMIPFVGTLIGILPVFILSMSYGNTVGAWGILIYGLVVVGSTDNIIRLFL 284 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + L T G++ GV G +GL GP+L++L V+ + Sbjct: 285 LKKLDNVHPLITLIGVIVGVPLFGFIGLIFGPLLISLFLVVVRIYKKEF 333 >gi|21228979|ref|NP_634901.1| hypothetical protein MM_2877 [Methanosarcina mazei Go1] gi|20907519|gb|AAM32573.1| hypothetical protein MM_2877 [Methanosarcina mazei Go1] Length = 347 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 131/345 (37%), Gaps = 7/345 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++I+ + V +Y + + + I+ T P+Y + K + A++ + Sbjct: 9 LALFLIVALSAVIIYAIFPYVDYLFGGFILFITFKPLYRFLLKKTRLNRQVSALLVIIIS 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L ++PL FL ++E+++++ NQ I + D + S Sbjct: 69 IFLVLIPLFFLLSMVIIEIQQIL-----LNQEAIMATIEVGDRLFNNFFSRFGISENIFQ 123 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + L T I+F+ + ++ M ++ S Q Sbjct: 124 INFEERV-MDLATQIINFLSLLVVGSIQSISHRAIGLLIMYFLFYYLLTGEESDFMQNLF 182 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + ++R+T + IA+ EG +L ++ + GV G I A+ Sbjct: 183 LAIPFNTKNTVILLNEFRNIVRTTLIASGAIAVIEGGILIVSFLIFGVQGAFLWGSIAAV 242 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +P G PI + I ++ + A + + G RP + K+ Sbjct: 243 LSFLPVVGTPIIWIPAVIIQFLQQDYVAAAGILITGIFLSVSDSSFFRPVIQKKVGKIHP 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G+ G+ GL+G+ IGP+L+A + K +KE Sbjct: 303 FQSLLGIFIGIPLFGLVGIIIGPLLLAYFYLTVKMFSEEYLSDKE 347 >gi|218886800|ref|YP_002436121.1| hypothetical protein DvMF_1707 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757754|gb|ACL08653.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 504 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 118/358 (32%), Gaps = 46/358 (12%) Query: 8 PQGIMRWMIMFIILVSLYFL-KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 P + ++ + + + L + F + A+++ + P+ + + A Sbjct: 113 PTRVWLALLAVVAVGIGWLLARPFIHTLAVAIVVAALAAPLQERIARRVRQ-PDLAAAST 171 Query: 67 TVSVMCLFIVPLLFLFYYGMLE-----------------------------MKELVSKVV 97 ++++ PL + + Sbjct: 172 ILTLLLGVAAPLAVFVAALIPQARALARAAMAFYAASGNGGSDAAAGAAAGAATGAVPGA 231 Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 +P P L + S T+ L+ F + + A + G Sbjct: 232 AVAAGSLPAPVELG-LARLHELSVWVTRTLADFGIDAPDLADFDPASLRGTLLGAARQAG 290 Query: 158 MIFLD-----------YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 L + M+ L+F RDG + + + L A ++ Sbjct: 291 ETVLHGITAGVGNAVYLFGHFLLMLFILYFLLRDGRQMMAFVKRVSP-LAHAQEDRLLTA 349 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + V RS F+G ++A+ +G++ + L G+P + G + AMIP G + + Sbjct: 350 LRGVARSVFMGGVLVAVFQGVIGAVGFALVGLP-ALFWGFAMSFAAMIPVVGTALIWAPA 408 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + YL + G + A L W A+ + D LR + + +P L F ++GG+ Sbjct: 409 TAYLYLSGETWRAVFLLGWCAVLVSSSDGLLRAWFMKEGAGIPMLYLFLAILGGLNMF 466 >gi|289192288|ref|YP_003458229.1| protein of unknown function UPF0118 [Methanocaldococcus sp. FS406-22] gi|288938738|gb|ADC69493.1| protein of unknown function UPF0118 [Methanocaldococcus sp. FS406-22] Length = 334 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 148/336 (44%), Gaps = 19/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I+ ++++ LY L F + + + + PIY+ K + T A +A Sbjct: 7 KYLRKGVIVGLLIMLLYILWPFIDVLAYSCAFAYMALPIYNLLRKKF--NKTISAGLA-- 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++IVP++ + Y +L E++ + + + ++++I ++ S + + + Sbjct: 63 --ISIYIVPIMVITIYTILTFMEII-----LSFNTKSIEPYINEI-LSIYNSFMLERIID 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + Q L + F+K ++ S + + I ++ F+F RDG + + Sbjct: 115 NGQFLTKYIDEFVK-----YLINQVSGKIVDIGYLIIKAIMVLFLTFYFLRDGDKVKNLI 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + ++ F+ ++I ++ Y + VP +IT Sbjct: 170 ISFVPDEYKEKMRIYLSYLHDSYKNLFISCVSLSIIITILSYIGYLIVAVPYAELFAIIT 229 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I A++P G + + +++IY + + A +F++G + L I D +RP+LV + Sbjct: 230 GIFALLPILGGWMVYISIAIYFFLMHDYTKAVFMFIYGELFLSIAPDFVIRPYLVKKEVD 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + ++GL G IGP+++ + + Sbjct: 290 IHPVLVVIAFLMAPLSLGLSGFAIGPLVVGALNAFY 325 >gi|154149249|ref|YP_001406317.1| acid membrane antigen A [Campylobacter hominis ATCC BAA-381] gi|153805258|gb|ABS52265.1| acid membrane antigen A [Campylobacter hominis ATCC BAA-381] Length = 352 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 133/365 (36%), Gaps = 23/365 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +I+ ++ +Y + F + ++I ++ + + + AV Sbjct: 1 MKTSKIFLSGVILIMLGWVIYLFQSFLLAISIGVLIAVSTAGLNEKILKFTKNRQIVSAV 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + TV + LF VP ++ + + V L ++ + + +P E Sbjct: 61 LTTVILCVLFFVPFIYAIAEIAKSLANI--DVALLDKTLSYIKNYEFSLPNFAKNFEPDI 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K + + + + L +AS ++ L + +II FF G I Sbjct: 119 KSFIANLNFEGIIKQIL---------SYASGIAKSSANFALQMFLIIIFYFFTNLYGRDI 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + F + A+ +G + + G + Sbjct: 170 LNFFKK-SIPIAENELDYMFKQTSNTMSVVFYSTILNAVLQGFLFSIIAAIYGFDM-IFF 227 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF--- 299 ++ A ++IP G + + + +Y L GN A + L+ I + + D ++P Sbjct: 228 AILYAFCSLIPIIGGALCWAPLGLYELANGNFSAAVIISLYSIIVISTIADNFIKPVIIR 287 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LV P + + FF ++ G+ T G G+ +GP ++ L + + + + Sbjct: 288 FINSKLVDNPANINEILIFFAMLAGIGTFGFWGMILGPAILTLFVSVLNLYVDFSNKTEH 347 Query: 355 KISSN 359 + + + Sbjct: 348 RKTKH 352 >gi|304315341|ref|YP_003850488.1| hypothetical protein MTBMA_c15960 [Methanothermobacter marburgensis str. Marburg] gi|302588800|gb|ADL59175.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 335 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 139/356 (39%), Gaps = 23/356 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E + ++++ +IL+S + + + + + P+ + S Sbjct: 1 MIERLRGTITSASFLVLALILLSAIVIYPIWTMLFLGAVFAYIVRPVALRINERIPYLS- 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + M + I+PL+ + + + + + P L+ + Sbjct: 60 ----VSIIIAMIVVIMPLIGIVVFTVDSLI-----------NSTPSLITLARGFDIPYLP 104 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L+ + L+ + I L + + + F+F RD Sbjct: 105 GQLQSSGGTLGALRGILTDILRGSINYVI-----DVIQSVPMIALQLFIFLSSTFYFARD 159 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + ++++ +V+ S F G + A+ G++ G + L G P Sbjct: 160 GERLLSYIRGIIPTEAKPFMRRMASETERVLMSIFYGHFLTALLIGIMAGLGFHLLGYPY 219 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+IT I +IP G ++T ++IY L+ GNI + ++G I L +D LRP Sbjct: 220 AIVLGIITGIFQLIPVIGPWAAYTPLAIYDLVTGNILRGVLVLIFG-IFLSTIDIYLRPK 278 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L G + + G +GG G+ G +GP+++ L + + +E Sbjct: 279 LSGKYADIHPMIFLVGFLGGPVVWGVAGFIVGPLVLGLAYAALEAYRLGESAAEEN 334 >gi|239905742|ref|YP_002952481.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239795606|dbj|BAH74595.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 394 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 75/354 (21%), Positives = 136/354 (38%), Gaps = 10/354 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 E R ++ + L ++ L F V+ A I+ P+ + + Sbjct: 38 DEHGPLHARYYRPFLLLVFLAAVATVGGLLWPFRHAVILAAILAILLSPLRRRMEAALKG 97 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG--IPVPRWLSDIPG 115 S A + T + + ++P L + L+ + V G + L + Sbjct: 98 SRYLTAALLTAATLIFIVLPAAVLAAVLTSKAGALLVEGVQWWSEGGVASLLDRLQAVAL 157 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 W L Q LK+ G + G + + + +++ LF Sbjct: 158 PDWVQGLLDMIPIDSQGLKVSLLGAAGAAGRQLLAMGRGLAGQMA-GFAAQTVMLVLFLF 216 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +F + + L L L + ++++ + V RS +G + +GL WL Sbjct: 217 YFLSQAEQVVRGLRLLSP-LRRSQEQELTERLKTVTRSILVGGAAAGLSQGLATMLGLWL 275 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+ + G + + ++IP G + +YLL G + A L LW + + VD Sbjct: 276 VGID-PLFWGFVALLASLIPVVGTTLIHVPAIVYLLSLGAMGKAVFLTLWWLVVVSTVDN 334 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +RPF + +LP L F ++GGV G LGL GPV M+L V+++ + A Sbjct: 335 VVRPFFIRDGAQLPLLLIFVAIIGGVLLFGPLGLIYGPVSMSLCLVVFQLFVEA 388 >gi|24215055|ref|NP_712536.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45657464|ref|YP_001550.1| putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196107|gb|AAN49554.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45600703|gb|AAS70187.1| conserved putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 376 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 141/350 (40%), Gaps = 11/350 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSV 70 + +F I V + + L ALI+ + + E + I V Sbjct: 20 FSILFLFAIGVFFLVFRPYLYSSLMALILYLATRRPHKLLKGYLGEKLQWLVPWIMITLV 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++P F+ + E ++ K+ ++ + ++ + ++ + P Sbjct: 80 SMIVLLPSYFVIRTLISEALSILFKLRISLSEDKIIETLMNFALLTDFITDNEFFWVKVP 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMIIALFFFYRDGFS 183 + +E ++ +D I S L +++ F ++ LFF Y+DG Sbjct: 140 EIYGEFAENYVDILNLDSIYGILSNASSFILGNIELPTGILMNLFFALLVLFFLYQDGKK 199 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + +++ R + +++ G II+I +G + W+AG+ S Sbjct: 200 VERFILDNLP-FSKQLEEQVGRKLTAAVQTVIRGNLIISILQGTAIYILLWIAGISSPFL 258 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + A ++IP G + + +Y L ++ N A G +++ ++P ++ Sbjct: 259 YASLAAFFSIIPVVGTSAVWLPIGLYILFLENNPMMAIFFMGSGLFFYVVLENFVKPRML 318 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ L F L+GG++ G++GL +GPV + L+ ++W + +E Sbjct: 319 DKKLQAHPLLIFLSLIGGIKEFGIMGLVVGPVTVTLVVILWDFWKLYRRE 368 >gi|323144594|ref|ZP_08079182.1| hypothetical protein HMPREF9444_01862 [Succinatimonas hippei YIT 12066] gi|322415603|gb|EFY06349.1| hypothetical protein HMPREF9444_01862 [Succinatimonas hippei YIT 12066] Length = 358 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 118/319 (36%), Gaps = 22/319 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F +L ++ + K + + I T++V ++PL L +Y + Sbjct: 30 LPFVNGILGSITLYVLLRRPNFYLARKYGKRKSPW--IITIAVTVFILIPLSLLAWYAIE 87 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ +A + + + + G ++ ++ S Sbjct: 88 LVQNFDLDPKIAIEKITTTIKKIEEATGFDLITDKSLSFITAQFSNIFNM---------- 137 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ +++ I+ LFF G + + L + + + Sbjct: 138 --------LMSGINNFAINVFTAILLLFFLLSGGMKMELYIAKLLP-FSEENKHAVIKRL 188 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 ++RS +G+ ++A+ +G+V Y L GV + + GV+T ++IP G I + + Sbjct: 189 HVIVRSNAIGIPLLAVIQGVVATIGYMLCGVNNALLFGVLTGFASIIPIVGTMIVWIPLV 248 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I G++ + L + + D +R L L T FG++ G+ G + Sbjct: 249 IGQYFDGSLLSTLGLAFYCIAIISQCDNVIRMILQKRMANTHPLITIFGVIAGLPIFGFM 308 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ GP+++++ + Sbjct: 309 GVIFGPLIVSMFLLFVDMF 327 >gi|326424274|ref|NP_762641.2| putative permease [Vibrio vulnificus CMCP6] gi|319999660|gb|AAO07631.2| Predicted permease [Vibrio vulnificus CMCP6] Length = 360 Score = 124 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 122/338 (36%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I I++V + F +L AL++ +P+ + K S+ A + V + + Sbjct: 26 ITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLAIERKLGLRSSRSATLVAVIGVLVLG 85 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 P + + E + + + P G W + + Sbjct: 86 TPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSVKEWPLVGEKVYAAWDEAAVNLPVFI 145 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +K+ ++ A+ ++I I L + SI + S + Sbjct: 146 DKHQPQIKS-IFGWVFDSAAGAAKSVFVLIGAVIIAGIMLAWAEPASASIRKIFISFTDP 204 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + ++ +R +G+ IA ++ G+ LAGVP+ +I + A++ Sbjct: 205 IKGPS---LHKLTTATLRQVAVGIIGIAFLTAMIFGAIVALAGVPAASLFTLIALVFAIV 261 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + L + +F I +D L+P ++G + +P Sbjct: 262 QLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFIDNFLKPIILGRGLDVPMPIILI 321 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G VGGV + G+LG+F+G +A ++ + + + + Sbjct: 322 GAVGGVMSGGILGMFVGAAFLATGYQVFMQWVESESKQ 359 >gi|240103191|ref|YP_002959500.1| hypothetical protein TGAM_1134 [Thermococcus gammatolerans EJ3] gi|239910745|gb|ACS33636.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 335 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 141/334 (42%), Gaps = 29/334 (8%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+ +S ++ P+ +++ + ++P++ + + A+I T ++ L + Sbjct: 15 LIILYLSWRTVRPLVTPLFFGVLLAYIAYPLHMRLRRRFSAHES--ALILTAIMIGLGTI 72 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+F + + V V WLS + + + Sbjct: 73 LLVFFTLLSIKLVNRFYMNVK-------DVLAWLSSLQFSGTLQTFFGQ----------- 114 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ + + + S F Y L +I + A ++ G + + + SL Sbjct: 115 ----VQSQIVPKLTDYVSSFTFSVPKYLLQLIVFLFAFYYALVYGEKLREFILSLVPENQ 170 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---SHVALGVITAIMAM 253 + +I K + + ++ + +G ++ Y + GV + + G +T + + Sbjct: 171 APFIVEILNRTDKTLDALVRAWLLLNVAKGFLMTIGYIIFGVGDVYTAIIAGFLTFLFSF 230 Query: 254 IPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLP 311 +P + + A +IYL +KG++ A + ++GA+ + + D T+RP LV +L Sbjct: 231 VPLLEGWMLWVAGAIYLYMKGSLLGAIGIAVYGAVLVSPLPDYTVRPMLVAKDAELDETL 290 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F G++GG GL GL +GPV++++ V+ KE Sbjct: 291 VFIGMLGGTWAFGLKGLLLGPVILSIALVLLKEW 324 >gi|59714262|ref|YP_207037.1| inner membrane protein [Vibrio fischeri ES114] gi|59482510|gb|AAW88149.1| predicted inner membrane protein [Vibrio fischeri ES114] Length = 362 Score = 123 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 125/346 (36%), Gaps = 7/346 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++L LK F ++ II +PI + F K S + +++I TV + L + Sbjct: 21 LSVLVLWCFSILKPFLLLMVWGGIIATALYPIVAFFSKKTALSESKVSIILTVIGVLLLL 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL+ L EL + + D P + + S + Sbjct: 81 IPLVALSTGIYTSGTELFLGYQDGSIAIPKPKERMQDWPIIGHEAYSFMSLASSNLESLL 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + G F+ + +S I + F + + + L Sbjct: 141 FKYSAEVKVVAAKAASLVGSLGGGFIQFIVSTIIAGV----FMANAAKCERAFILITNRL 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA--LGVITAIMAM 253 + +++ ++ IRS G+ +A+ + + G + G+ + V + + A+ Sbjct: 197 TGKHGEELIKLSKITIRSVVQGVIGVAVIQATMAGLGMAVVGISASVLGLWVFLVLVFAI 256 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I + + Y+ +W + + D L+P L+ +P + Sbjct: 257 IQLPPILILLPIIFYVFSVDTTTAGVLFAVWCVL-VSSSDAILKPVLLSRGSHIPIIVIL 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ G++GLF+G V+++L ++ + E + N Sbjct: 316 LGALGGMAMSGIVGLFVGAVVLSLTYQMFTVWLKNEAEETQNAKDN 361 >gi|261402505|ref|YP_003246729.1| protein of unknown function UPF0118 [Methanocaldococcus vulcanius M7] gi|261369498|gb|ACX72247.1| protein of unknown function UPF0118 [Methanocaldococcus vulcanius M7] Length = 331 Score = 123 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 124/316 (39%), Gaps = 22/316 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F A + + PIY+ + K + T A +A + ++++P+ + Y Sbjct: 27 PFIDTFAYACAFAYMALPIYNLLVKKL--NRTVSAALA----IGIYLIPITLITIYAFST 80 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +V + P ++ + + L + +++ + + +K Sbjct: 81 FLNIVLSI---------DPNSINQYFLSVLNNPLLDRIITNDEMITKYVNELIKYAISQL 131 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + I ++ F+F RDG+ + S + + + + Sbjct: 132 SGKII-----DVGYLAIKTILVLFITFYFLRDGYKFKDVVISFTPENYKEKMRIYLQYLH 186 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 ++ F+ ++I ++ Y +AGV +IT + A++P G + + A++I Sbjct: 187 DSYKNLFISCVSLSIIITILSYIGYLIAGVKYAELFAIITGVFALLPILGGWMVYIAIAI 246 Query: 268 YLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 Y + N A +F++G + L I D +RP++V + + + + ++GL Sbjct: 247 YFFLTHNYAKAIFIFIYGELFLSIAPDFVIRPYIVKKEVDIHPVLVVVAFLIAPLSLGLS 306 Query: 327 GLFIGPVLMALIAVIW 342 G IGP+++ + + Sbjct: 307 GFAIGPLVVGALNAFY 322 >gi|326423645|ref|NP_759024.2| putative permease [Vibrio vulnificus CMCP6] gi|319998997|gb|AAO08551.2| Predicted permease [Vibrio vulnificus CMCP6] Length = 360 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 121/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I I++V + F +L AL++ +P+ + K S+ A + V + + Sbjct: 26 ITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLAVERKLGLRSSRSATLVAVIGVLVLG 85 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLK 134 P + + E + + + P G W + + Sbjct: 86 TPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSVKEWPLVGEKIYAAWDEAAVNLPVFI 145 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +K+ ++ A+ ++I I L + SI + S + Sbjct: 146 DKHQPQIKS-IFGWVFDSAAGAAKSVFVLIGAVIIAGIMLAWAEPASASIRKIFISFTDP 204 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + ++ +R +G+ IA ++ G+ LAGVP+ +I + A++ Sbjct: 205 IKGPS---LHKLTTATLRQVAVGIIGIAFLTAMIFGAIVGLAGVPAASLFTLIALVFAIV 261 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + L + +F I +D L+P ++G + +P Sbjct: 262 QLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFIDNFLKPIILGRGLDVPMPIILI 321 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G VGGV + G+LG+F+G A ++ + + + + Sbjct: 322 GAVGGVMSGGILGMFVGAAFFATGYQVFMQWVESESKQ 359 >gi|154248269|ref|YP_001419227.1| hypothetical protein Xaut_4349 [Xanthobacter autotrophicus Py2] gi|154162354|gb|ABS69570.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 368 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 131/337 (38%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +++ +K F P+L LII S P++ + + A + + + L + Sbjct: 27 LALLLIWCFTIMKPFLNPILWGLIIAIASHPLFVRLRAAVHGRTAVAATLYVLLALALLV 86 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLK 134 +P L ++ +K L + P P + I G W ++ Sbjct: 87 LPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDSVRTWILVGDPIHRFWLLSSTNLDQAF 146 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L T G + + L L I I F + S + + Sbjct: 147 ASITPELTTMGRSMVSGVS-----DVLVGFLEFIIAIFVAAAFMANAASGQRIAGDVAIR 201 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + + + IRS G+ +A+ + L+ G + A +P+ L ++ I+A++ Sbjct: 202 LAGEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGFLAADIPAAGLLALLCLIIAIV 261 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + V IY + A +W + +++ LRP ++ + +P L F Sbjct: 262 QLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTG-VSLIEHVLRPLMLARGVDVPMLVVFI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G +GG+ T G+LGLF+GPV++AL + + A Sbjct: 321 GAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQAAPR 357 >gi|325105490|ref|YP_004275144.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324974338|gb|ADY53322.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 337 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 140/350 (40%), Gaps = 22/350 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ +++ + ++ L+ LKG+ L A++I P Y+ F K S + A Sbjct: 7 KQRNNLVLIVLILMGILILFSLKGYITSFLGAIVIYTLFKPTYTLFNQKL--SKSISAAF 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + I+P L Y + +KV+ + L I ++ Sbjct: 65 IILISFIIIIIPFFVLGYM-------ITNKVMALRTDNFQLKAILYKI------NDFAGI 111 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL+ P+ L + + + F D L ++ M L+F + Sbjct: 112 HLNQPKLLDKYLDKL-----TNLVQELFPSFLGGAFDVFLGLVLMYFILYFMFVQSERFE 166 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L + ++ + + S +G IIA+ +G ++ A+++AG+ + G Sbjct: 167 NGLIKYAP-LREYHTRQFAEELKNTTYSNVIGQGIIALIQGSLVSLAFFIAGLEDAIFWG 225 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V++ ++ +P GAP+ ++ L + G+ +NA + ++ + L +D +R + Sbjct: 226 VVSVFLSFMPVIGAPLVTLPAAVILYLNGDHYNAIFIVMFTLLILINIDNVIRFMINKHF 285 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + T G++ G+ G +G+ GP+L+ + IK + Sbjct: 286 ADTHPIVTVIGVIIGIPLFGFVGIVFGPLLLLWFMHLIAIYEDDIKAENK 335 >gi|163785444|ref|ZP_02180051.1| hypothetical protein HG1285_05465 [Hydrogenivirga sp. 128-5-R1-1] gi|159879288|gb|EDP73185.1| hypothetical protein HG1285_05465 [Hydrogenivirga sp. 128-5-R1-1] Length = 286 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 6/265 (2%) Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E+ +L + + ++ IP + E +L ++K+ + FLK Sbjct: 15 AVFVNELTKLYPIFINKISKSDSIESFILSIPVISYLHEKIISYLQTL-NIKVDIQDFLK 73 Query: 143 TNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T + S+ IF+D+ L II MII +FF ++DG + + L + Sbjct: 74 TAISYVVNFLISKGRTIFIDFSFIVLGIILMIITIFFLFKDGKNFYIWIYKLIP-MEEKE 132 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 I+ I+ LG + AI +G++ Y+ +GV + +IT A IP GGA Sbjct: 133 KNYIAVSSYNTIQGIVLGSFLTAIAQGILSFIGYYFSGVGFSLFWAIITFFSAFIPIGGA 192 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + +++YL + L+G + VD ++P ++GG + L F + G Sbjct: 193 SLIWVPIAVYLFFTKGLIVGILFSLYGTFIISTVDNIIKPIVIGGKANIHPLIMIFAIFG 252 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G +G+FI P+++ +I + Sbjct: 253 GLNLFGFVGVFIAPIIVVIIYNLLN 277 >gi|150402118|ref|YP_001329412.1| hypothetical protein MmarC7_0191 [Methanococcus maripaludis C7] gi|150033148|gb|ABR65261.1| protein of unknown function UPF0118 [Methanococcus maripaludis C7] Length = 336 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 130/337 (38%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR ++ L+ F + A + + P ++ + + + Sbjct: 7 RFIMRVFVLISFASVLFVAFPFLDTIAFACAFAYMTEPFFNVIKRYTGRN------LGAI 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + VP L L + ++ E ++ + ++++ A E +S Sbjct: 61 ICILMITVPALSLVVLILTDVVEFLNTLN-IQSFVDNSIQFVNYFGLQNIAKEDLNSIIS 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + AS+ + L + + I ++F +DG+ + Sbjct: 120 ELWTFLKPT-----------VNKMASQIYGLPLLFIKGL-VTIFLTYYFLKDGYRFKDAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + A GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGIPNPVTLGALS 227 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P G + +S+Y + G A LF +G I L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSVYYVAVGMYSKAVLLFGFGVIFLSLAPDFAIRPRLVNHESS 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPALALVAFLMGPLALGVTGFALGPLIMGTFDAIFR 324 >gi|134045790|ref|YP_001097276.1| hypothetical protein MmarC5_0751 [Methanococcus maripaludis C5] gi|132663415|gb|ABO35061.1| protein of unknown function UPF0118 [Methanococcus maripaludis C5] Length = 336 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 137/337 (40%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR ++ L F + A + + P +++ ++ T A+++ + Sbjct: 7 RFIMRIFVLVSFTAVLMIAVPFLDTIAFACAFAYMTEPFFNAV--RRYAGRTLGAILSIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V VP L L + ++ E ++ + + + + ++++ + A E + LS Sbjct: 65 MVT----VPALSLVVLILSDVVEFLNTLNVPSLVDTTI-QFVNYLGLQNIAQEDLNRILS 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I + A + I L + + + ++F +DG + Sbjct: 120 ELWTFLKPT-----------INKMAEQIYGIPLLFIKGL-ITVFLTYYFLKDGHRFKDAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + + GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLNEAYKNLFVVNALTSFTVGLISIAGFWAIGLPNPVTLGALS 227 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P G + +S+Y + G A LF +G I L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSLYYIAVGMYTKAILLFGFGVIFLSLAPDFAIRPRLVNHESD 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPAIALVAFLMGPLALGVTGFALGPLIMGTFDAIFR 324 >gi|298675240|ref|YP_003726990.1| hypothetical protein Metev_1335 [Methanohalobium evestigatum Z-7303] gi|298288228|gb|ADI74194.1| protein of unknown function UPF0118 [Methanohalobium evestigatum Z-7303] Length = 356 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 136/346 (39%), Gaps = 5/346 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + ++++Y K F V+ ++ + + +P+YS K +S + I+ +S + + Sbjct: 14 LLLLVSIIAIYLTKEFVPVVVFSIFLTYVLYPVYSYLE-KVTKSERIASSISVLSALFIL 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + L + E+ +L++ + I + + L D + + Sbjct: 73 GLCIYLLLSSAVREISKLITSPDQIREPIIALEKELLDFISSTDYLSFIAESYISNGLSQ 132 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ++ F + F Y +S + ++ ++F D I Q+ + Sbjct: 133 PVVTVI--NWVSPYVKTFLTSFITNTPLYLISFVLTLLFTYYFLIDARRIRAQIMDVIPE 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + F + + G++ ++L G+P V LG+ ++ ++ Sbjct: 191 KNKHVVSLFINELNVIYYNLFNIFFVTSFLTGVIASVGFFLLGIPYPVILGMAVFLLTLL 250 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIKLPFLPT 312 P GAP+ + IY LI + A + L+G L I D +RP L + + T Sbjct: 251 PLVGAPVIYIPFFIYYLIIQDYATAIIILLFGIFILSIFPDSFIRPRLAKNKASIHPVIT 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +G G +GP++ + ++ I + E+ S Sbjct: 311 LLSFTAPIFVIGFTGFIVGPLVYGFLLAFYRTKIKIKYQTDEEPES 356 >gi|197337673|ref|YP_002158735.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] gi|197314925|gb|ACH64374.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] Length = 362 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 123/346 (35%), Gaps = 7/346 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++L LK F ++ II +PI + F K S + +++I TV + L + Sbjct: 21 LSVLVLWCFSILKPFLLLMVWGGIIATALYPIVAFFSKKTALSESKVSIILTVIGVLLLL 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL+ L EL + + D P + + S + Sbjct: 81 IPLIALSTGIYTSGTELFLGYQDGSIAIPKPKERMQDWPIIGHEAYSFMSLASSNLESLL 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + G F+ + +S I + F + + + L Sbjct: 141 FKYSAEVKVVAAKAASLVGSLGGGFIQFIVSTIIAGV----FMANATKCERAFILITNRL 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA--LGVITAIMAM 253 + +++ ++ IRS G+ +A+ + + G G+ V + + A+ Sbjct: 197 TGKHGEELIKLSKVTIRSVVQGVIGVAVIQATMAGLGMAAVGISVSVLGLWVFLVLVFAI 256 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I + + Y+ +W + + D L+P L+ +P + Sbjct: 257 IQLPPILILLPIIFYVFSVDTTTTGVLFAVWCVL-VSSSDAILKPVLLSRGSHIPIIVIL 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ G++GLF+G V+++L ++ + E + N Sbjct: 316 LGALGGMAMSGIVGLFVGAVVLSLTYQMFTVWLKNEAEETQNAKDN 361 >gi|297619520|ref|YP_003707625.1| protein of unknown function UPF0118 [Methanococcus voltae A3] gi|297378497|gb|ADI36652.1| protein of unknown function UPF0118 [Methanococcus voltae A3] Length = 360 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 135/336 (40%), Gaps = 20/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 I++ +F ++ +Y + F + + + + P Y F K S + A+++ + Sbjct: 7 NIILKVGSLFCFMLMVYIMLPFIDAISFGIAFAYITKPAYDRFRRKF--SKSTSAILSIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +L + + + + V +S I ++ L Sbjct: 65 VLTIPVLATILIIVEQLI-----FYLLNLDLSTLSTSVSTLISKI--SIYNINLSNYWTP 117 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L E L + + ++ ++ ++F +DG + Sbjct: 118 ISSDLFKFLEGILNGLLGQL---------SVVPLLMIKVLIILFMTYYFLKDGHKLLNAT 168 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A+ K ++ + ++ F G + ++ ++ Y L G+P+ +ALGV+T Sbjct: 169 LIHIPECYQAHVKIFAQKLNDSYKNMFTGTALTSLIAMVIAIIGYQLLGIPNALALGVLT 228 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIK 306 I ++P G + ++IY L++G I A ++++G I L FI+D +RP +V Sbjct: 229 GICVLLPVVGGWGIYMPLAIYYLLQGEILYALTIYMFGTIFLSFILDFYIRPKVVKSGGN 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + T + T+G+ G +GP+++ ++ Sbjct: 289 VHPVMTLTAFLIAPLTLGIAGFALGPIIVGAFDSLY 324 >gi|254173525|ref|ZP_04880197.1| membrane protein [Thermococcus sp. AM4] gi|214032217|gb|EEB73047.1| membrane protein [Thermococcus sp. AM4] Length = 335 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 139/340 (40%), Gaps = 29/340 (8%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+ +S ++ P+ +++ + +P++ + + A++ T ++ L Sbjct: 15 LVILYLSWRTVRPLVTPLFFGVLLAYIVYPLHMRLRRRFSAHES--ALVLTAIMIGLGTA 72 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+F + + V V WLS + + + Sbjct: 73 LLVFFTLISIKLVNRFYMNVK-------DVLVWLSSLQFSGTLQTFFEQ----------- 114 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ + + + S F Y L ++ + A ++ G + + SL Sbjct: 115 ----VQSQIVPKLTDYVSSFTFSVPKYLLQLVVFLFAFYYALVYGEKLRGFILSLVPGNQ 170 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---SHVALGVITAIMAM 253 + +I K + + ++ + +G ++ Y + GV + + G +T + + Sbjct: 171 APFMVEILDRTDKTLDALVRAWLLLNVAKGFLMTIGYVIFGVGDVYTAMIAGFLTFLFSF 230 Query: 254 IPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLP 311 +P + + A ++YL ++G++ A + ++GA+ + + D T+RP LV +L Sbjct: 231 VPLLEGWMLWVAGAVYLYMRGSLLGAIGISVYGAVLVSPLPDYTIRPMLVAKDAELDETL 290 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F G++GG GL GL +GPV++++ V+ KE E Sbjct: 291 VFIGMLGGTWAFGLKGLLLGPVILSIALVLLKEWKKRNSE 330 >gi|300114287|ref|YP_003760862.1| hypothetical protein Nwat_1663 [Nitrosococcus watsonii C-113] gi|299540224|gb|ADJ28541.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 547 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 115/327 (35%), Gaps = 10/327 (3%) Query: 5 MLNPQGIMRWMIMFII-LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I F+ L+S+Y L+ P ++ +++ + P+ K S T Sbjct: 1 MNARRQLRFWLIGFLFFLISVYLLREILLPFVAGMVVAYLIDPLCDWLERK-GCSRTAAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T + + + LL L E+ L+ + S P E W Sbjct: 60 SLVTAGFILVVSMVLLLLVPLLRSEIVHLIETLPSLIARAQD-----STWPWLQLLQERW 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +S Q L + S G+ + + M + F+ RD Sbjct: 115 SIDMSQIQDAAREQAGMLVKWVGKTVGTILSS-GLALANLLSLVFIMPVVTFYLLRDWDK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q+DSL ++ +++ V+ G + + G L G+ + Sbjct: 174 LIAQIDSLLPRKHAPVIREQVKLIDTVLSGFIRGQFSVCLLLGAFYAVGLALIGLDFGLM 233 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLV 301 +G++ +++ IP I V + L + G + V L P LV Sbjct: 234 VGMLAGLLSFIPYVGTIVGFIVGLGLAFVQFSEWTPIFLVAGVFIIGQVIEGNVLTPRLV 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + L + F L+ G G LG+ Sbjct: 294 GTRVGLHPVMVIFALLAGGALFGFLGI 320 >gi|159906093|ref|YP_001549755.1| hypothetical protein MmarC6_1711 [Methanococcus maripaludis C6] gi|159887586|gb|ABX02523.1| protein of unknown function UPF0118 [Methanococcus maripaludis C6] Length = 336 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 128/337 (37%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR ++ L F + A + + P +++ I + Sbjct: 7 RFIMRIFVLVSFAAVLMIAVPFLDTIAFACAFAYMTEPFFNAVRRYTGR------TIGAI 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + VP L L + ++ E ++ + +++S + A E LS Sbjct: 61 LSILMVTVPALSLVVLILTDVVEFLNTL-DVQSLIDNTIQFVSYLGLQNIAQEDLNPILS 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I + A + + L + + + ++F +DG + Sbjct: 120 ELWTFLKPT-----------INKMAEQIYGLPLLFIKGM-ITVFLTYYFLKDGHRFKDAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + A GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALS 227 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P G + +S+Y + G A LF +G I L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSLYYIAVGMYSKAILLFGFGVIFLSLAPDFVIRPRLVNQESD 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPAIALVAFLMGPLALGVTGFALGPLIMGTFDAIFR 324 >gi|227501581|ref|ZP_03931630.1| integral membrane protein [Corynebacterium accolens ATCC 49725] gi|227077606|gb|EEI15569.1| integral membrane protein [Corynebacterium accolens ATCC 49725] Length = 495 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 121/338 (35%), Gaps = 18/338 (5%) Query: 11 IMRWMIMFIILVSLY-FLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R +I+ + L ++Y L F PVL ALII PI +K + A+ Sbjct: 64 AVRLLIIGVFLFAIYHVLGSFWQGILPVLLALIICTVLNPIARWMRTK-GLPAGLAAITT 122 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + M + + L + V Q + W P + + ++ T Sbjct: 123 ILISSAAVGGLIASVAPDFMRQSQSLYLQTVSGIQ---QLQLWAQGPPLNLDSDDMSTYI 179 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ + + + +++ +++ FFF +DG Sbjct: 180 DEAAGWLQERAGVIAGSVFTGI---------GNATSFFITVFIVLVLTFFFLKDGTKFLP 230 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ + ++++ + + +G L GVP +AL + Sbjct: 231 WLRDATGRRAGWHLTELLTRAWNTLGGFIRAQAVVSLIDAIFIGLGLVLIGVPLAMALAI 290 Query: 247 ITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT I IP I A++ + L+ A + + + L P+L + Sbjct: 291 ITFIAGFIPFVGAIVSGALAVVIALVSLGFTQALLVLGLVLLVQQLEGNVLSPWLQAKAM 350 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + ++ G GL+G F+ A+IAV ++ Sbjct: 351 NLHPVIVLVSVIVGSALFGLIGGFLAVPTAAMIAVAYR 388 >gi|305680242|ref|ZP_07403050.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305659773|gb|EFM49272.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length = 478 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 116/339 (34%), Gaps = 20/339 (5%) Query: 11 IMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++IM L+ + PVL A+I+ WP K + ++ Sbjct: 85 ALRFIIMVAAGYLLWRGLALVWEGLLPVLLAIIVSTVLWPPVRWLRKHK-----VPSALS 139 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTK 125 V V+ F L +F + + GI + +W+ P Sbjct: 140 VVIVLITFFAILGGIFTAMAPSITTQSKDLAEQATKGIEQLQQWIQGPP--------LNI 191 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L H + TFL+ D R S ++ + M++ FFF +DG Sbjct: 192 DLGHYNDIIDQISTFLQNRVTDIASRVVSGI-STAGSIVVTFVLMLVLTFFFLKDGEGFL 250 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + II+ + + + VP AL Sbjct: 251 PMIRRTTGYNVGWHLTEVLTRIWNTLSGFIRVQAIISFVDASCICIGLLILHVPLAPALA 310 Query: 246 VITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT + IP + A++ I L+ + NA + + L+P L Sbjct: 311 VITFFASFIPIVGALVAGALAVIIALVSNGVTNALLVLAIIIAVQQLEGHILQPVLQSKA 370 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A ++V+ + Sbjct: 371 MNLHAAIVLLSVTIGSTMFGVVGAFLAVPVAATLSVLVR 409 >gi|306835741|ref|ZP_07468745.1| integral membrane protein [Corynebacterium accolens ATCC 49726] gi|304568372|gb|EFM43933.1| integral membrane protein [Corynebacterium accolens ATCC 49726] Length = 495 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 121/338 (35%), Gaps = 18/338 (5%) Query: 11 IMRWMIMFIILVSLY-FLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R +I+ + L ++Y L F PVL ALII PI +K + A+ Sbjct: 64 AVRLLIIGVFLFAIYHVLGSFWQGILPVLLALIICTVLNPIARWMRTK-GLPAGLAAITT 122 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + M + + L + V Q + W P + + ++ T Sbjct: 123 ILISSAAVGGLIASVAPDFMRQSQSLYLQTVSGIQ---QLQLWAQGPPLNLDSDDMSTYI 179 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ + + + +++ +++ FFF +DG Sbjct: 180 DEAAGWLQGRAGVIAGSVFTGI---------GNATSFFITVFIVLVLTFFFLKDGTKFLP 230 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ + ++++ + + +G L GVP +AL + Sbjct: 231 WLRDATGRRAGWHLTELLTRAWNTLGGFIRAQAVVSLIDAIFIGLGLVLIGVPLAMALAI 290 Query: 247 ITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT I IP I A++ + L+ A + + + L P+L + Sbjct: 291 ITFIAGFIPFVGAIVSGALAVVIALVSLGFTQALLVLGLVLLVQQLEGNVLSPWLQAKAM 350 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + ++ G GL+G F+ A+IAV ++ Sbjct: 351 NLHPVIVLVSVIVGSALFGLIGGFLAVPTAAMIAVAYR 388 >gi|45358507|ref|NP_988064.1| hypothetical protein MMP0944 [Methanococcus maripaludis S2] gi|44921265|emb|CAF30500.1| hypothetical protein MMP0944 [Methanococcus maripaludis S2] Length = 336 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 133/337 (39%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +MR ++ L + F + A + + P +S+ + + Sbjct: 7 RFLMRIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTGR------TLGAI 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + VP + L + + ++ E ++ + A ++++ I A E + LS Sbjct: 61 LCILMITVPAIILVFLILTDIFEFLNSLDYAG-FVDYTVQFINYIGLQNIAKEDLSSILS 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A + + L + + + ++F +DG+ + Sbjct: 120 EIWNFLKPT-----------VNKMAGQIYGLPLLFIKGL-VTVFLTYYFLKDGYRFKDAV 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + A GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALS 227 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P G + +S+Y + G A LF +G + L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVNHESS 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPAFALVAFLMGPLALGITGFALGPLIMGTFDAIFR 324 >gi|110637635|ref|YP_677842.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280316|gb|ABG58502.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 366 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 142/342 (41%), Gaps = 8/342 (2%) Query: 6 LNPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +R ++ F ++ + F + +L +I+ + PI + ++ S + AV Sbjct: 14 NSLETAIRLVLFFGLMFFCYIIMMPFVSILLGGIILAVAASPILTLLRNRFNLSDKWGAV 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T + +FIVP L + + E +S A G+ L +P + Sbjct: 74 LITCVALIVFIVPSYLLIHSLIREFTHFISPENRAAVTGM--IENLRGLPLIQDTLYEFL 131 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K+L++ S+ + F G+ + + S+I + F Sbjct: 132 KNLTNNSSVVFKEHATQIEAVGIGVLGFIGGLGLGLVHFLASVIIAGL----FLAHAKQS 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + ++ S I + I++ G+ +A E ++ +++AGVP Sbjct: 188 AGLAEKIFIRIAGKNGEEFSHITERTIQNVTKGIIGVAFLESVLAAFGFFVAGVPLAGVW 247 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ +++++ G + IY+ G+ A+ L W + ++I + ++P L+ Sbjct: 248 TVVCLLLSIVQLGIVPLAVPIVIYMFYTGSPVTASLLAAW-MVLIYIFEHLMKPILLSKG 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P F G+VGG G +G+F+G VL ++ ++ + Sbjct: 307 APVPMPIIFIGVVGGFIAGGFIGMFLGAVLFSIAYKLFLVWL 348 >gi|46578545|ref|YP_009353.1| hypothetical protein DVU0128 [Desulfovibrio vulgaris str. Hildenborough] gi|120603874|ref|YP_968274.1| hypothetical protein Dvul_2836 [Desulfovibrio vulgaris DP4] gi|46447956|gb|AAS94612.1| membrane protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120564103|gb|ABM29847.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris DP4] gi|311232471|gb|ADP85325.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris RCH1] Length = 352 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 105/321 (32%), Gaps = 10/321 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 RW+++ F + A + P+ + + A + T Sbjct: 3 TRWLLLAAFAAGAALFSSFLKALFFAACLACAFRPLSRRLEAWRG--PLVAAGLTTALAG 60 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++P+ + + + ++ + + + + A L Sbjct: 61 MCLVIPVAVVGSLAAPQAVQGLAVLDGLRESNWFTSPEAQQLVDDIDARLRDLPGLEGGL 120 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + L+ L +++ +F F + ++ + Sbjct: 121 RGLARNAAGILGTAARTALAGGVGLAGGALNAVLQGFIVLMLIFVF----TAYARHIQRF 176 Query: 192 GEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L P + R V + G+ ++A +G++ G + +AGVP G I Sbjct: 177 ALALLPMPRAMLDRCVTAFRGAVVGVLAGVVLVAAIQGVLCGIGFAVAGVPQAAFWGFIA 236 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A++A IP G + +L G A L LW AI + D LRP + I+ Sbjct: 237 AMVAPIPVVGTMAVWIPACAWLWFAGKTTAAIGLVLWSAIIVSGSDNILRPIFLKTGIEA 296 Query: 308 PFLPTFFGLVGGVRTMGLLGL 328 P F ++ G+ G +GL Sbjct: 297 PIALIFLAIICGLAAFGPMGL 317 >gi|255323344|ref|ZP_05364478.1| acid membrane antigen A [Campylobacter showae RM3277] gi|255299636|gb|EET78919.1| acid membrane antigen A [Campylobacter showae RM3277] Length = 346 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 137/352 (38%), Gaps = 23/352 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + +Y K F + A ++ + + F+ + T A + Sbjct: 1 MNNRVFFGVFALCALALVVYLFKPFLLNIFIAALLAVATSNVNVKFLQLTKGKRTLSAAL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+++ LFI PLL+ + + + + P Sbjct: 61 TTLALFSLFIAPLLYAVIEIAKHAANFNTGYITNTLNYFQSGNFQLPEPIK--------- 111 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P+ +++++ +K + I A G +++ + +IF+++ FF G + Sbjct: 112 -FLEPKIKEMIADIDVKAISANLIANLAG-IGKSSVNFLVDMIFILVFFFFAVLYGSELV 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L S + + + I V V+ + I AI +G + G + +G Sbjct: 170 GYLKSALP-MKESESEFILSEVANVMSVVLYSIVINAILQGCLFAIITISYGY-NGFLMG 227 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF---- 299 ++ A +++P G +++ +S+Y GN A + ++ I + +V D L+P Sbjct: 228 ILFAFTSLVPVVGGLLAWGPISLYEFANGNTAAAIVIAVYTIIVISVVADTFLKPIVIKF 287 Query: 300 ----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LV P K+ L FF ++ G+ T G GL +GP ++ K + Sbjct: 288 INDKLVKIPTKINELLLFFSMIAGISTFGFWGLILGPAIVTFFISTIKLYTL 339 >gi|289580791|ref|YP_003479257.1| hypothetical protein Nmag_1111 [Natrialba magadii ATCC 43099] gi|289530344|gb|ADD04695.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 381 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 135/321 (42%), Gaps = 11/321 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 ++ + VL A ++ F +P + + + A++ TV + IVPL+ Sbjct: 17 AIATLMVAPLLQYVLGAALLAFILYPTHERLEPRLGTRPS--ALLLTVVAIVGAIVPLML 74 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + V A+ + R ++ G+ ++ + + Q L+ + Sbjct: 75 VSLIVLDTVVSFVVGFDAAST--VDEIRTIAHDDFGIDTEQIQSLETAVIQELENSAAGA 132 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L+ + + ++ + ++ I L++ DG L + L Sbjct: 133 LELALFELVG-----LLNRGMEMGIGLLVFIFLLYYLLVDGDLFVAWLREVVP-LKDHIR 186 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 +++ + V + ++A+ EGL+ G ++L GVP+ VI I++ +P G Sbjct: 187 EELFTEINVVTWAVIKSHVLVAVIEGLLGGLGFYLLGVPNVAFWTVIMIIVSFLPAIGVW 246 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + YLL+ A + L+G L +VD LR ++V L G++GG Sbjct: 247 LVWGPAVGYLLMTAGPVGAVAMLLYGITVLSLVDNYLRAYVVDRGSGLHPAVVIVGVIGG 306 Query: 320 VRTMGLLGLFIGPVLMALIAV 340 + +G++GLF+GPVL+A+ Sbjct: 307 IYLLGIMGLFLGPVLLAVFKA 327 >gi|294496066|ref|YP_003542559.1| hypothetical protein Mmah_1416 [Methanohalophilus mahii DSM 5219] gi|292667065|gb|ADE36914.1| protein of unknown function UPF0118 [Methanohalophilus mahii DSM 5219] Length = 340 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 127/327 (38%), Gaps = 19/327 (5%) Query: 25 YFLKGFFAPVLSAL-IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 Y L + A II + P++S K + +++ + I+PL ++ Sbjct: 28 YALYPYIGAFF-AAVIIYVITNPVHSYITKKLKLDMRITSIMIIFLSLVTIIIPLYYIII 86 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + K+L++ ++ + + + P L L Sbjct: 87 LLLEQAKQLMN---------------IARLNWDILEENIQIIDEIAPALNIELKMAELVH 131 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +FI F + + + M+ L++ +++ + Sbjct: 132 IIEEFITGFIFGTIQNLGNQLIGLAIMVFLLYYLLSTDNKKLEEMALNILPFSTENKLHL 191 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + + ST LG+ IA+ +G VL + L G+ + G IT I+++IP G P+ + Sbjct: 192 LNEMRNITYSTILGILFIALFQGGVLTITFLLLGIEGALLWGFITLILSIIPFIGPPLVW 251 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++Y +I+G+ T +F+ G + D LRP++ + L + GL G+ Sbjct: 252 GPATVYKIIEGDFIAGTIIFVAGMF-ISNFDYVLRPYIQEKFAAIHPLISLLGLFIGIYL 310 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G +GL +GPVL++ ++ K Sbjct: 311 FGAIGLVVGPVLLSCFILMLKMFNQEY 337 >gi|242399644|ref|YP_002995069.1| Predicted permease [Thermococcus sibiricus MM 739] gi|242266038|gb|ACS90720.1| Predicted permease [Thermococcus sibiricus MM 739] Length = 328 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 142/347 (40%), Gaps = 31/347 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-FLA 63 M + + + + I ++ + + + A I+ + P++ ++ + + + Sbjct: 1 MKAEEIVWGTVTLIIAYLAWKTIAPLLSAIFFAAILAYAVLPLHKRLTTRIDNKKSALIL 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + +F V L+ + + E + + W Sbjct: 61 TLLLIGLSSIFTVELVLIIKNLIASFYEDIMNFI------------------------YW 96 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + P + + + L + + + + Y L ++ + + F + Sbjct: 97 SLTIELPFGIHDVLQK-LYSQSTPKLAEYVQSYAFSIPKYLLQLVIFLAMFYTFLVNSDR 155 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PS 240 I +Q+ L +K+ + +++ ++ I +G ++ +W G+ P+ Sbjct: 156 IKKQIYLLIPRGHEDLGEKLLKRADVTLQALIRAWLLLNIAKGALMTLGFWGFGITDIPT 215 Query: 241 HVALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP 298 + G++T + + IP + + +I+LL +G++ A + ++GA+ + + D T+RP Sbjct: 216 ALLAGLLTMLFSFIPLFEGWMIWVVAAIFLLKQGDVLKAIAISIYGAVLVSPLPDFTIRP 275 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV KL + G++GGV G+ GL IGP+++ L++ + KE Sbjct: 276 KLVAKEAKLDEIMVLIGMIGGVWAFGVKGLIIGPIILNLVSALLKEW 322 >gi|150398999|ref|YP_001322766.1| hypothetical protein Mevan_0245 [Methanococcus vannielii SB] gi|150011702|gb|ABR54154.1| protein of unknown function UPF0118 [Methanococcus vannielii SB] Length = 336 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 125/337 (37%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR + L ++ F + A + S P Y + + + Sbjct: 7 RFIMRIFVFITFLAVIFTAWPFLDTLAFACAFSYMSKPFYDAIRKFTGR------TLGAL 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +P +FL + + ++ ++ + V +L+ + A + T +S Sbjct: 61 ICILIITIPAIFLLLFIISDVINFLNTLNFLEIIEN-VTNFLTYLGLQNIAKKDLTPVIS 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + I+ + ++F +DG + + Sbjct: 120 ELWIFLRPTINMMASQL------------YRLPLLFIKILITVFLTYYFLKDGHNFKGAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + + ++ F+G + + G++ +W G+P+ V LG ++ Sbjct: 168 MPHVPDVYAPQTELFMENLHEAYKNLFVGNALTSFTVGIISIIGFWAMGLPNPVTLGALS 227 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P G + + ++ + G A LF +G + L + D +RP +V Sbjct: 228 GILTLLPVVGGWTIYMPLCLFYIATGMYLKALLLFGFGVLFLSLAPDFVIRPSIVSNESD 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP+++ I++ Sbjct: 288 IHPALLLIAFLMGPLALGITGFALGPIIVGTFDAIFR 324 >gi|116328176|ref|YP_797896.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330900|ref|YP_800618.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120920|gb|ABJ78963.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124589|gb|ABJ75860.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 375 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 140/350 (40%), Gaps = 11/350 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSV 70 + +F I + + + L ALI+ + + E + I V Sbjct: 19 FSVLFVFTIGIFFLVFRPYLYSSLMALILYLATRRPHKLLKEYLGEKFQWLVPWIMISLV 78 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +VP F+ + E ++ K+ ++ + ++ + ++ + P Sbjct: 79 SMIVLVPSYFVIRTLIGETLSILFKLRISLSEDKIIETLMNFAMLTDFITDNEFFWVKVP 138 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMIIALFFFYRDGFS 183 + +E ++ +D I S L +++ F ++ LFF Y+DG Sbjct: 139 EIYGEFAENYVDILNLDSIYGILSNASSFILGNIELPTGILMNLFFALLVLFFLYQDGKK 198 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + +++ R V +++ G II+I +G + +AG+ S Sbjct: 199 VERFILDNLP-FSKQLEEQVGRKVASAVQTVIRGNLIISILQGAAVYILLLVAGISSPFL 257 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + ++IP G + + + +Y L ++ N A ++ ++P ++ Sbjct: 258 YASLASFFSIIPVVGTSVVWLPIGLYILFLENNPMMAFFFMGSALFFYLALENFIKPRML 317 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ L F L+GG++ G++GL +GPV++ L+ ++W + KE Sbjct: 318 DKKLQAHPLLIFLSLIGGIKEFGIMGLVLGPVVVTLVVILWDFWKLYRKE 367 >gi|300858162|ref|YP_003783145.1| hypothetical protein cpfrc_00744 [Corynebacterium pseudotuberculosis FRC41] gi|300685616|gb|ADK28538.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302205884|gb|ADL10226.1| Putative membrane protein [Corynebacterium pseudotuberculosis C231] gi|302330441|gb|ADL20635.1| putative membrane protein [Corynebacterium pseudotuberculosis 1002] gi|308276119|gb|ADO26018.1| putative membrane protein [Corynebacterium pseudotuberculosis I19] Length = 524 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 123/337 (36%), Gaps = 18/337 (5%) Query: 12 MRWMIMFII-LVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +I+ Y +K F PV+ ALI+ W + K+ S A+++ Sbjct: 114 IRILIIAATGFAGWYLIKQFWRGLLPVVLALIVCTVLWAPTAWM-RKRGVPSGLAALVSI 172 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ F + + + + L + Q V WL P + + EL + Sbjct: 173 LASFGFFGGLIWVISPDIARQSQTLYFQAFEGVQK---VQLWLQGPPFNLDSDELGNRVN 229 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + Q + S T I ++I +++ FFF +DG Sbjct: 230 TAVQWFQRQSGTIAGEIFSGI---------GIATSVLVTIGVVLVLTFFFLKDGEGFLPW 280 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ + ++ + ++++ + + +G+ L GVP +AL V+ Sbjct: 281 LRSIVGKRAGWHLTELLTRSWITLGGFVRAQALVSLVDAIFIGAGLILLGVPMALALAVL 340 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T I IP A+++ + L+ + A + L P L + Sbjct: 341 TFIAGFIPIIGAFVAGALAVLVALVSLGLTKAIITLGIVIAVQQLEGNVLSPLLQSRAMN 400 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ A+IAV+++ Sbjct: 401 LHPVIVLVSVTVGGGIFGIMGAFLAVPAAAMIAVLFR 437 >gi|94986915|ref|YP_594848.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731164|emb|CAJ54526.1| predicted permease [Lawsonia intracellularis PHE/MN1-00] Length = 346 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 131/352 (37%), Gaps = 26/352 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI----- 65 + R + + I L F A + S+P + K S + VI Sbjct: 1 MTRILSLLSIGAWFLLLWPFPVTTFLATSMACVSYPYFLKLTQKI--SRYWAIVIYTICL 58 Query: 66 -----ATVSVMCLFIVPLLFLFYYGMLEMKEL-VSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + IVP + +++E + + A+Q + RWL +IPG Sbjct: 59 SLLILLPLIITISLIVPQAVAGLKILDQLREPGFLQSINADQMLDSIDRWLKEIPGLEGG 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ + + + L+I I+ Sbjct: 119 VKQLASSIAG-----------IVGSVTRSVLAGGLGIAGGAFHAVLTIFIFIMVTVLCIT 167 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + + + + + + I +G+ +++I +G + G + +A VP Sbjct: 168 NAELLYTMI-RITSNFSYEVLNRFIVTIRNAIFGVLVGIVLVSIIQGFLCGIGFAVANVP 226 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 G+ITA +A IP G + + V I+L ++G + +W I + VD LRP Sbjct: 227 QPAFWGLITAFVAPIPFVGTSLVWIPVCIWLWLQGETVAMVAMIIWCVIVVAGVDNLLRP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F + I + ++ G+ G +G+ GP+L+A+ KES+ A++ Sbjct: 287 FFLKTGIDATLIALILSILCGLAAFGPVGIVAGPILVAIAIQASKESLQALQ 338 >gi|255324406|ref|ZP_05365523.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255298312|gb|EET77612.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length = 489 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 119/338 (35%), Gaps = 18/338 (5%) Query: 11 IMRWMIMFIILVSLYFLKG-F---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R +I+ + L +LY L G F PVL ALII P+ + A + Sbjct: 58 AVRLLIICVFLYALYRLLGNFWQGLLPVLLALIICTVLAPVAKKL-RNIGLPAALAAAVT 116 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + F+ M + + L + V Q + W P Sbjct: 117 ILVSFTAVGGLIAFVAPDFMRQSRSLYLQTVSGIQS---LQLWAQGPP--------LNLD 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + ++L+ + G +++ +++ FFF +DG Sbjct: 166 SDDMSSYIDEAASWLQQRAGAIAGSVFTGIGTAT-SILVTLFIVLVLTFFFLKDGAKFLP 224 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ + I+++ + + +G L GVP +AL + Sbjct: 225 WLRDATGKRAGWHLTELLTRAWATLGGFIRAQAIVSLVDAVFIGVGLALIGVPLAMALAI 284 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT I IP I A+S+ + L+ + A + + + L P+L + Sbjct: 285 ITFIAGFIPFVGAIVAGALSVTIALVSLGVTKALLVLGLVLLVQQLEGNVLSPWLQSKAM 344 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G GL+G F+ A+ AV ++ Sbjct: 345 DLHPVIVLVSVTVGSALFGLIGGFLAVPAAAMFAVAYR 382 >gi|311740740|ref|ZP_07714567.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304260|gb|EFQ80336.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 489 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 119/338 (35%), Gaps = 18/338 (5%) Query: 11 IMRWMIMFIILVSLYFLKG-F---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R +I+ + L +LY L G F PVL ALII P+ + A + Sbjct: 58 AVRLLIICVFLYALYRLLGNFWQGLLPVLLALIICTVLAPVAKKLRD-IGLPAALAAAVT 116 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + F+ + + + L + V Q + W P Sbjct: 117 ILVSFTAVGGLIAFIAPDFVRQSRSLYLQTVSGIQS---LQLWAQGPP--------LNLD 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + ++L+ + G +++ +++ FFF +DG Sbjct: 166 SDDMSSYIDEAASWLQQRAGAIAGSVFTGIGTAT-SILVTLFIVLVLTFFFLKDGAKFLP 224 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ + I+++ + + +G L GVP +AL + Sbjct: 225 WLRDATGKRAGWHLTELLTRAWATLGGFIRAQAIVSLVDAVFIGVGLALIGVPLAMALAI 284 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT I IP I A+S+ + L+ + A + + + L P+L + Sbjct: 285 ITFIAGFIPFVGAIVAGALSVTIALVSLGVTKALLVLGLVLLVQQLEGNVLSPWLQSKAM 344 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G GL+G F+ A+ AV ++ Sbjct: 345 DLHPVIVLVSVTVGSALFGLIGGFLAVPAAAMFAVAYR 382 >gi|183221243|ref|YP_001839239.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911334|ref|YP_001962889.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776010|gb|ABZ94311.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779665|gb|ABZ97963.1| Conserved hypothetical protein; putative membrane protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 369 Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 132/359 (36%), Gaps = 15/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-- 58 M + I+ ++ I L + + L F P L A + + + + Sbjct: 1 MNWITNKNETIVYILLAGIFLATCFTLFFVFKPFLWASFLALLFYLTTRKIHKRLKNVLG 60 Query: 59 ---STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 I + ++ +P + + E LVS V V L+ Sbjct: 61 VKFHGLSPYIMVILMLACVFIPSYLIVSTLIRESLNLVSYVRNQLTEESIVALLLNSPIL 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSII 168 + +E + P + + +D I L + Sbjct: 121 TDFFTENEFFWIKLPIMYREYVGQHMDILNLDSIYSLLKNSSGFLLGSFEVPGAIIFNGF 180 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F I LFF Y++G + L L +++ R + + IR+ +G I++ +G + Sbjct: 181 FTFILLFFLYKEGSRMEHGLFLLLP-FPTEIEERLGRRIEEAIRTVMMGNMFISLLQGAL 239 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL-LIKGNIFNATCLFLWGA 286 + V + L I I ++IP G + + + +Y+ L++ N + + GA Sbjct: 240 VYFLLLFTSVSNKFLLSSIATIFSLIPVVGTSVVWFPIGLYMGLVQENWTGSVLFMIAGA 299 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I++ ++P ++ +K F L+GG++ G+ G+ IGP+ + L+ ++W Sbjct: 300 ASYLILENFVKPKILDKKLKTHPFLIFLSLIGGLQEFGVAGIIIGPMALTLVIILWDFW 358 >gi|21228773|ref|NP_634695.1| hypothetical protein MM_2671 [Methanosarcina mazei Go1] gi|20907289|gb|AAM32367.1| hypothetical protein MM_2671 [Methanosarcina mazei Go1] Length = 401 Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 141/340 (41%), Gaps = 16/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + L +LY FF ++ + + + P+YS F K ++ A+I Sbjct: 8 KAIYAVVLIMVSLFALYITSSFFYVIILSALFAYVIHPVYS-FCLKFVKNRQICALIPLG 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V L + M E ++ N R + + + + Sbjct: 67 TVFILIASSGFMMIKALMNETSRILEIPNTLNGFANMDLRRIVGLFEPIIK--------T 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSIS 185 HP L +L T +D++P+ + I D + +I +++ ++ + +I+ Sbjct: 119 HPGKLTESIGGYLNTLVMDYVPQIQNNIVQISTDLSILIIELIVIVVLTYYLLVESETIA 178 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L L R + + ++ F+ + + G++ G YW+ GVP + G Sbjct: 179 AELPGLFPD--RKVGVVFLRELNHIYQNLFVVYFLTCLATGVIGGILYWVLGVPYPLIWG 236 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGG 303 ++T IMA++P GA + +++Y ++ N F A L G + L I+ D +RP L Sbjct: 237 IVTFIMALLPVVGAGTVYGLLALYYVLIQNYFTAGALVFLGIVFLNIIPDFVIRPKLARS 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + T V +G +G+ IGP+ + +++ Sbjct: 297 RAAIHPAITLLAFAAPVFVLGPVGIIIGPLTYGFLLAVFR 336 >gi|315638162|ref|ZP_07893344.1| acid membrane antigen A family protein [Campylobacter upsaliensis JV21] gi|315481698|gb|EFU72320.1| acid membrane antigen A family protein [Campylobacter upsaliensis JV21] Length = 347 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 138/351 (39%), Gaps = 23/351 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + I+ I+ + LY K F + A ++ + +++ F+S ++ + Sbjct: 1 MKSGKIFLICFILVILSLLLYLFKSFLLVMAIAALMAVATSNLHAKFLSLTKQRKLLAST 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K + L Q + + +P + E Sbjct: 61 LTTSFMILLFFAPFIYTSIELAKALKNF--DINLITQTLDYIKHYEFSLPSSLEFLEPKI 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K L L L +AS F + + + + + FF G + Sbjct: 119 KEFIAELDLNSLYRQAL---------TYASSFTKSGAKFLMDMALICVFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L S+ + +I V V+ M I+AI +G + G + G + + Sbjct: 170 VIYLKSIVP-INKTELDEILGEVGNVMAVVLYSMIIVAIFQGALFGIIMFFYGYDG-LLM 227 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--- 299 GVI A+ ++IP G + + VS+Y GN+ +A + ++ I + F+ D ++P Sbjct: 228 GVIFAVSSLIPAVGGALVYVPVSLYTFASGNLSSAIVILIYSFIMISFVADTLIKPLIIK 287 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV P + L F ++ G+ + G G+ +GP ++ + Sbjct: 288 WINEKLVKTPTNINELLIFLAMIAGISSFGFWGIILGPAILTFFISTLRLY 338 >gi|300812733|ref|ZP_07093140.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496273|gb|EFK31388.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 393 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 117/336 (34%), Gaps = 6/336 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 48 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ + ++ S L SL+ + + Sbjct: 108 QSQIDSLVKNWPTIWKNST---NAVDELLHSPKFSGLRDSLQKQMTSLQKNFSKSMGSTV 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S + + ++ LFF +DG + L + K+ Sbjct: 165 SSALGNLTSAVTVATAVFT-TLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 V + + S +G +AI G++ Y + G P AL + + +IP G I Sbjct: 224 EVNQAVSSYVIGQVSVAICVGIMFFIGYTIIGEPYGAALAICAGFLNLIPYFGTFIGLIP 283 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L+ A L ++ IE I + + P +VG +K+ + T ++G G Sbjct: 284 ALIIALVTNLPMVAKVLVVF-FIEQIIETRVISPLVVGNRLKMHPVTTIIVMLGAGSVWG 342 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L G+ G + A++ ++ ++ +F Sbjct: 343 LWGVIGGIPIYAVMKILLTHVYRYYRKVSHLYDDSF 378 >gi|325684459|gb|EGD26623.1| permease [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 396 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 118/336 (35%), Gaps = 6/336 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 48 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ + ++ S L SL+ + + Sbjct: 108 QSQIDSLVKNWPTIWKNST---NAVDELLHSPKFSGLRDSLQKQMTSLQKNFSKSMGSTV 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S + + ++ LFF +DG + L + K+ Sbjct: 165 SSALGNLTSAVTVATAVFT-TLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 V + + S +G +AI G++L Y + G P AL + + + +IP G I Sbjct: 224 EVNQAVSSYVIGQVSVAICVGIMLFIGYTIIGEPYGAALAICSGFLNLIPYFGTFIGLIP 283 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L+ A L ++ IE I + + P +VG +K+ T ++G G Sbjct: 284 ALIIALVTDLSMVAKVLVVF-FIEQIIETRVISPLVVGNRLKMHPATTIIVMLGAGSVWG 342 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L G+ G + A++ ++ ++ +F Sbjct: 343 LWGVIGGIPIYAVMKILLTHVYRYYRKVSHLYDDSF 378 >gi|57242122|ref|ZP_00370062.1| acid membrane antigen A Cj1363 [Campylobacter upsaliensis RM3195] gi|57017314|gb|EAL54095.1| acid membrane antigen A Cj1363 [Campylobacter upsaliensis RM3195] Length = 347 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 139/349 (39%), Gaps = 23/349 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + I+ I+ + LY K F + A ++ + +++ F+S ++ + Sbjct: 1 MKSGKIFLICFILVILSLLLYLFKSFLLVMAIAALMAVATSNLHAKFLSLTKQRKLLAST 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K + L Q + + +P + E Sbjct: 61 LTTSFMILLFFAPFIYTSIELAKALKNF--DINLITQTLDYIKHYEFSLPSSLEFLEPKI 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K L L L +AS F + + + + + FF G + Sbjct: 119 KEFIAGLDLNSLYRQAL---------TYASSFTKSGAKFLMDMALICVFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L S+ + +I V V+ M I+AI +G + G + G + + Sbjct: 170 VIYLKSIVP-INKTELDEILGEVGNVMAVVLYSMIIVAIFQGALFGIIMFFYGYDG-LLM 227 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--- 299 GVI A+ ++IP G + + VS+Y GN+ +A +F++ I + FI D ++P Sbjct: 228 GVIFAVSSLIPAVGGALVYVPVSLYTFASGNLGSAIVIFIYSFIMISFIADTLIKPLIIK 287 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LV P + L F ++ G+ + G G+ +GP ++ + Sbjct: 288 WINEKLVKTPTNINELLIFLAMIAGISSFGFWGIILGPAILTFFISTIR 336 >gi|212223162|ref|YP_002306398.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus onnurineus NA1] gi|212008119|gb|ACJ15501.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus onnurineus NA1] Length = 348 Score = 116 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 127/338 (37%), Gaps = 35/338 (10%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ II ++ + P+ L++ + +PI+ I + E+ + A + TV ++ L Sbjct: 12 VLVIIYIAWEVVSPLITPIFFGLVLAYAVYPIHKRLIPELGEARS--AFLLTVGMVGLGG 69 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L VV + P L Sbjct: 70 TITAELIMISAQVAASFYYNVVDFFNWILAQP-------------------------LPS 104 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 F++ +FIP+ + Y L + + ++ + SI +Q+ Sbjct: 105 EVLDFIRNFSGEFIPKLSEYLSKQAFSLPMYPLQLFIFLFTFYYALANSTSIIEQIQLSL 164 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---SHVALGVITA 249 ++I + V K + + ++ + +G+++ + + V + + G +T Sbjct: 165 PEKNRHLGEEILQSVSKTLGALVRAWLLLNVAKGVLMTFGFIIFDVSDIYTAIVAGFLTF 224 Query: 250 IMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKL 307 + + +P + + + Y +G +A + L+G + + D +RP +V L Sbjct: 225 LFSFVPLFEGWMIWLIAAAYFAKEGMYLHAAGISLYGFFLVSPMPDYIIRPLIVAKDTDL 284 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F G+VGG MG+ GL IGP+++ L+ + KE Sbjct: 285 NETLVFIGMVGGTWAMGIKGLIIGPIVLNLLLTLLKEW 322 >gi|255534118|ref|YP_003094490.1| hypothetical protein Phep_4237 [Pedobacter heparinus DSM 2366] gi|255347102|gb|ACU06428.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 350 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 129/343 (37%), Gaps = 20/343 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T I +I+ + + Y L+G F +LS L++ P + + K + F A Sbjct: 5 TYKQRNNINLVIIIALGCLIAYSLQGIFGSILSTLVLFTILRPAFIYMVDVKGYNKNFSA 64 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V + + I+P L + ++ EL + + + IP G L Sbjct: 65 LLLLVVSVVVIILPFYTLSAMVINKIAELQNDPIYFKNLLFKLKHL---IPVGDDVQRLI 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L + + L ++ M L+F D Sbjct: 122 EEGL---------------KKAGTWATELFPSLISGAFNIVLGLLLMYFLLYFMLVDRER 166 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L ++ + + + LG IA+ +G +L +++ G V Sbjct: 167 FENALIKYAP-FRAQNAQRFAEEMRNTTYANVLGQGFIAMVQGSLLSLCFFVLGYTDPVF 225 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVIT ++ +P G P+ F ++ + GN F + ++G + + +D LR + Sbjct: 226 WGVITTFISFVPLLGPPVIFVPAALIQIANGNNFAGWAMLIFGFVVIINIDNVLRFMIAK 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + T G+V GV G+LGL GP+L++ ++ K Sbjct: 286 KVGNIHPIITVIGVVIGVPLFGILGLVFGPLLLSYFILLIKIY 328 >gi|222824271|ref|YP_002575845.1| acid membrane antigen A [Campylobacter lari RM2100] gi|222539492|gb|ACM64593.1| acid membrane antigen A [Campylobacter lari RM2100] Length = 347 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 132/353 (37%), Gaps = 23/353 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + I+FI+ L+ K F + A ++ ++ + F+S + A Sbjct: 1 MKSSNFFLISFILFILFWVLFLFKPFLMNIAIASLMAVSTSNVNVKFLSIFKGKKVIAAA 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 T ++ LF +P ++ + + + +P + E Sbjct: 61 ATTTFMLALFFIPFVYAIIELAKAASGF--NISYIHNTIEYFKNYSLHLPESLSFIEPKI 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K L +S+ L + S + ++ + + FF G + Sbjct: 119 KEALASIDLNSISKDVL---------TYLSSATKFGTKFLTDMVLICVFYFFANLYGAQL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ + + I V V+ F M + AI +G++ G + + Sbjct: 170 IGYIKTIVP-MKKEETQGILSEVSNVMSVVFYSMVLNAILQGVLFAIITKFYGYD-AILM 227 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVG 302 G++ ++IP G + + VS+Y N+ A +F++ + + FI D ++P+++ Sbjct: 228 GILFCFSSLIPVVGGALIYVPVSLYEFANNNLSGALVIFIYSVVMISFIADTLVKPYIIK 287 Query: 303 --------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P ++ L FF ++ G+ + G G+ +GP ++ K ++ Sbjct: 288 WINEKLVQIPTQINELLIFFAMIAGISSFGFWGIILGPAILTFFISTLKLYVI 340 >gi|297206302|ref|ZP_06923697.1| permease [Lactobacillus jensenii JV-V16] gi|297149428|gb|EFH29726.1| permease [Lactobacillus jensenii JV-V16] Length = 401 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 127/336 (37%), Gaps = 6/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI+ + F P++ AL+ + PI F K + T ++ + V+ I Sbjct: 42 ISFILNPAWVFFCAILPPLILALVQYYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + L P + + Sbjct: 102 WVINSLLPIIQGQVDALIKNWPNIWDTSVKTTQNLLHDPHLKGFKSNINSVIDSVEKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S MIF ++++ LF+ +DG ++ L Sbjct: 162 KSWQKTGTAALTNISSAVSVITMIF----MTLLTAPFVLFYMLKDGHQLNGYLTKFAPRR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + I + G +A+ G++ Y + G+P AL V+ A M +IP Sbjct: 218 WQDSFSRLLHDINEAISAYIRGQITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I+ V I I + + + AIE I + + P +VG +K+ + T Sbjct: 278 YFGTFIALIPVLIIASIT-SWGMLINVLIVFAIEQTIETRFISPIVVGNKMKMHPITTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+G GL G+ G + A++ +I S K Sbjct: 337 LLIGASAVWGLWGVIFGIPIYAVVKIIVSRSFNYFK 372 >gi|28974220|gb|AAO64221.1| putative acid membrane antigen A [Campylobacter fetus] Length = 367 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 123/334 (36%), Gaps = 23/334 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ + + + +++ + I ++F+ + A I T+ + +F +PL++ Sbjct: 35 LFLFQSYLLTISIGVLLAVATSNIQNAFLRFTNGKAALSAAITTLFLCTVFFLPLIYAVI 94 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + + + + +P + E K L L L L Sbjct: 95 EIVKNAANF--DIKSISHTIDYIKNFDLKLPQALSFLEPKIKELIAGIDLPTLIRKVL-- 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +A ++ + I F+++ LFF + + + + + I Sbjct: 151 -------SYAKGSLEKSANFLIDISFIMLFLFFSHFYANFFKSYIKKVSP-IAKYELEAI 202 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 V + F I +G + G + GV+ A ++IP G + + Sbjct: 203 FSEVANTMSVVFYSTIANMILQGFLFAIIASFYGFDG-LLFGVLFAFSSLIPVVGGALVY 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF--------LVGGPIKLPFLPTF 313 +S++ G+ A + ++ + + + D ++P L+ P K+ L F Sbjct: 262 IPLSVFEFSLGDTKAAIIILVYSIVVISTLADNFVKPLVIKFINEKLLKTPAKMNELLIF 321 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 F ++ G+ + G G+ +GP ++ L++ + M Sbjct: 322 FSMLAGLSSFGFWGIVLGPAIVTLLSATLRVYAM 355 >gi|260102475|ref|ZP_05752712.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260083712|gb|EEW67832.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 399 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 123/340 (36%), Gaps = 6/340 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 42 ISFVLNPAWVFFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 102 WIINILVPIAQNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S MI ++++ LFF +DG + + Sbjct: 162 KSGQSTINATIGNISSAVSIITMI----VMTLLTAPFILFFMLKDGHQLRPYITKFAPEH 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 218 WQSSFSQLLYDINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G P++ V + ++ + + IE I + L P ++G +++ + T Sbjct: 278 YFGTPLALIPVFVIAIMTSG-SMVIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G GL G+F G + A++ +I + E Sbjct: 337 LLIGASSVWGLWGVFFGIPIYAILKIIVSRVYNYYRRESE 376 >gi|312891170|ref|ZP_07750692.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311296337|gb|EFQ73484.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 350 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 123/323 (38%), Gaps = 18/323 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y L+G + +L A+++ P+Y + KK + +A++ + + + ++P L L Sbjct: 25 VYALRGLSSSILGAIVLFTIFRPVYLYLVEKKHWNKPLVAIMIILVSLIVIVIPFLSLSI 84 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ L S ++ P W + + SH + + Sbjct: 85 LVVNKISSLTS----------------ANFPIQKWLAAIDAFAGSHLNQPHFVDNINITQ 128 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + D L+++ + L+F + L + K Sbjct: 129 KIGTYAAELFPSILGSAADIFLTLLVLYFLLYFMFTQNKEFEAGLIKYAP-FREQHALKF 187 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + + S LG II+I +G++ + GV V GVI ++ +P G P Sbjct: 188 ADELRISTYSNVLGQGIISISQGIMFAIGLRITGVEDPVFWGVIGTFISFLPVVGVPTLA 247 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I LL+ + L ++G + + +D LR + L T G++ G+ Sbjct: 248 IPFGIILLLNDKTWQGVFLLIYGVLIIGYIDNFLRFIINKRIANTHPLITVIGVIIGIPL 307 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G+LGL GPVL++ ++ + Sbjct: 308 FGILGLVFGPVLLSYFLLLVEIY 330 >gi|118475422|ref|YP_891668.1| acid membrane antigen A [Campylobacter fetus subsp. fetus 82-40] gi|118414648|gb|ABK83068.1| acid membrane antigen A [Campylobacter fetus subsp. fetus 82-40] Length = 367 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 126/346 (36%), Gaps = 23/346 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ + + + +++ + I ++F+ + A I T+ + +F +PL++ Sbjct: 35 LFLFQSYLLTISIGVLLAVATSNIQNAFLRFTNGKAALSAAITTLFLCTVFFLPLIYAVI 94 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + + + + +P + E K L L L L Sbjct: 95 EIVKNAANF--DIKSISHTIDYIKNFDLKLPQALSFLEPKIKELIAGIDLPTLIRKVL-- 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +A ++ + I F+++ LFF + + + + + I Sbjct: 151 -------SYAKGSLEKSANFLIDISFIMLFLFFSHFYANFFKSYIKKVSP-IAKYELEAI 202 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 V + F I +G + G + GV+ A ++IP G + + Sbjct: 203 FSEVANTMSVVFYSTIANMILQGFLFAIIASFYGFDG-LLFGVLFAFSSLIPVVGGALVY 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF--------LVGGPIKLPFLPTF 313 +S++ G+ A + ++ + + + D ++P L+ P K+ L F Sbjct: 262 IPLSVFEFSLGDTKAAIIILVYSIVVISTLADNFVKPLVIKFINEKLLKTPAKMNELLIF 321 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F ++ G+ + G G+ +GP ++ L++ + M + + + Sbjct: 322 FSMLAGLSSFGFWGIVLGPAIVTLLSATLRVYAMLKSSDLDSKAKE 367 >gi|306837020|ref|ZP_07469966.1| integral membrane protein [Corynebacterium accolens ATCC 49726] gi|304567081|gb|EFM42700.1| integral membrane protein [Corynebacterium accolens ATCC 49726] Length = 486 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 128/344 (37%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS--------ALIIGFTSWPIYSSFISKKEESST 60 + + + + FI++ + L GF + A+++ +P+ + SK T Sbjct: 81 RSMAKISVCFILIAAGLGLAGFLLRFIWVGLLPVILAILVSTVLYPVTAWLRSK-GFPRT 139 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV + ++ +F + + K L+++ + + + ++D P + Sbjct: 140 LAAVTTLLGLVVIFGGIFAAMAPMVTAQSKVLINEAEAGI---MQLTKMVNDSPLDIEVD 196 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L QS+ TF K S F + ++ + M+ FF +D Sbjct: 197 QL--------QSVFQDIVTFAKGQASTIATGVVSGF-SMASSIAVATVIMLFITFFILKD 247 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + +++ V K + I+A+ + + +G W VP Sbjct: 248 GDRFLPWLRKYTGNSAAWHITELTSRVWKTLSGFIQAQAIVALVDAVFIGLGLWALQVPL 307 Query: 241 HVALGVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + VIT IP ++ A++ I L+ + NA I + L+P Sbjct: 308 ALVIAVITFFAGFIPIIGAVTAGALAVIIALVSNGLTNALLALALIIIVQQVESNVLQPI 367 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + G G++G F+ + A IAV+ + Sbjct: 368 LQSKAMGLHAAIVLLSITVGSTLAGIVGAFLAVPVAATIAVVLR 411 >gi|320094369|ref|ZP_08026156.1| integral membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319978702|gb|EFW10258.1| integral membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 517 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 105/315 (33%), Gaps = 9/315 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ PV AL I P+ + A + + +FI L + Sbjct: 116 LQEVLLPVAIALAIAVFLQPLVEWLRRRLHFPPALAATVGLLLFFVVFIAALSQATNQIV 175 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ LV++ + + WL P + + + L + Sbjct: 176 EQVPLLVNQATSGVKQLV---DWLEHGPIKVDTTAINNFVNQMRTELIEWV-----NSNK 227 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + A L S + M+ LFFF +DG SI + L + + Sbjct: 228 QSLATGALSITSSLLSMVTSGLTMLFCLFFFLKDGRSIWLWVVRLLPAPARVPLHESAIR 287 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + S +A + + + + G+P V + VIT A +P ++ A++ Sbjct: 288 GWVTLGSYVRTQIQVAAIDAVGISLGAFFLGMPMVVPIAVITFFAAFVPIIGALASGAIA 347 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + L+ +A + + + + L+PF++ + L + + G+ Sbjct: 348 VLVALVYKGATSAIIMLVIILVVQQVESNLLQPFMMSSAVSLHPVAVMLVITAAGSVGGI 407 Query: 326 LGLFIGPVLMALIAV 340 G G + A I Sbjct: 408 AGAVFGVPIAAFINA 422 >gi|259046341|ref|ZP_05736742.1| transport protein [Granulicatella adiacens ATCC 49175] gi|259036978|gb|EEW38233.1| transport protein [Granulicatella adiacens ATCC 49175] Length = 389 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 125/326 (38%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV +I + PIY ++KK ++ V V+ +FI+ + L Sbjct: 52 FISAIGVPVACGAVIYYLVKPIYDYLLNKKVP-KGIAILLVMVGVIVIFIMIITSLVPII 110 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LVS++ Q E + K + I S T Sbjct: 111 QKQLLDLVSQLPYYYQIISEQVEKFMQTGFFETIQEQFNKINTD----FIQSITERLNGI 166 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++F I D ++I+ M + L++ +DG + + + + Sbjct: 167 LNFTFSGIGSVVGIIGDIVITIMTMPVILYYLLKDGNKVIPFVTRMFPTRSQHKISVMLN 226 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G +AI G Y L G+P V +G+I ++ +IP I Sbjct: 227 EMNQQVSSYIRGQITVAICVGFTYIIGYTLIGLPYGVTIGMIAGLLTIIPYLGSIIGLTP 286 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + N A +FL IE I + L+P ++G +K+ + L+ + GL Sbjct: 287 ALIIGFVTNPTLALHVFLVFVIEQLIESRVLQPLILGSSLKMHPVTILIILLAAGKMFGL 346 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 +GL I + A++ V KE Sbjct: 347 VGLLIAVPVYAVVKVFITHFFAWYKE 372 >gi|149278254|ref|ZP_01884392.1| hypothetical protein PBAL39_11872 [Pedobacter sp. BAL39] gi|149231020|gb|EDM36401.1| hypothetical protein PBAL39_11872 [Pedobacter sp. BAL39] Length = 350 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 132/343 (38%), Gaps = 20/343 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T I +I+ + + Y L+G F +LS L++ P + + +K+ + A Sbjct: 5 TYKQRNTINLVIIIALGCLIAYSLQGIFGSILSTLVMFTILRPAFMYLVEEKKMNKRVAA 64 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ V + + I+P L + ++ +L + I L + + + Sbjct: 65 VLLLVVSVVVIILPFYALSTMVIEKIADL-------QKDQIYFKNLLFKLKHLIPVGGDF 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ + L ++ M L+F + Sbjct: 118 QNLIEDG-----------MKKAGNWVTELFPSLISGAFNTVLGLLLMYFLLYFMLVERER 166 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L ++ + + + LG IA+ +G ++ A+++ P + Sbjct: 167 FESSLLKYAP-FREQNAQRFALEMRNTTYANVLGQGFIAMVQGSLVSLAFYVLDYPDPLF 225 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVIT ++ +P G PI F +I ++ GN A + ++G + + +D LR + Sbjct: 226 WGVITTFISFVPVLGPPIVFVPAAIIQMLNGNNVAAWAMLIFGFVVIINIDNVLRFMIAK 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + T G+V G+ G+LGL GP+L++ ++ K Sbjct: 286 KVGNIHPIITVIGVVIGIPLFGILGLVFGPLLLSYFILLVKIY 328 >gi|161507183|ref|YP_001577137.1| putative permease [Lactobacillus helveticus DPC 4571] gi|160348172|gb|ABX26846.1| putative permease [Lactobacillus helveticus DPC 4571] Length = 399 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 123/340 (36%), Gaps = 6/340 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 42 ISFVLNPAWVFFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 102 WIINILVPIAQNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S MI ++++ LFF +DG + + Sbjct: 162 KSGQSTINATIGNISSAVSIITMI----VMTLLTAPFILFFMLKDGHQLRPYITKFAPEH 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 218 WQSGFSQLLYDINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G P++ V + ++ + + IE I + L P ++G +++ + T Sbjct: 278 YFGTPLALIPVFVIAIMTSG-SMVIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G GL G+F G + A++ +I + E Sbjct: 337 LLIGASSVWGLWGVFFGIPIYAILKIIVSRVYNYYRRESE 376 >gi|282933487|ref|ZP_06338863.1| permease [Lactobacillus jensenii 208-1] gi|281302418|gb|EFA94644.1| permease [Lactobacillus jensenii 208-1] Length = 401 Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 127/336 (37%), Gaps = 6/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI+ + F P++ AL+ + PI F K + T ++ + V+ I Sbjct: 42 ISFILNPAWVFFCAILPPLILALVQYYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + L P + + Sbjct: 102 WVINSLLPIIQGQVDVLIKNWPNIWDTSVKTTQNLLHDPHLKGFKSNINSVIDSVEKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S MIF ++++ LF+ +DG ++ L Sbjct: 162 KSWQKTGTAALTNISSAVSVITMIF----MTLLTAPFVLFYMLKDGHQLNGCLTKFAPRR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + I + G +A+ G++ Y + G+P AL V+ A M +IP Sbjct: 218 WQDSFSRLLHDINEAISAYIRGQITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I+ V I I + + + AIE I + + P +VG +K+ + T Sbjct: 278 YFGTFIALIPVLIIASIT-SWGMLINVLIVFAIEQTIETRFISPIVVGNKMKMHPITTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+G GL G+ G + A++ +I S K Sbjct: 337 LLIGASAVWGLWGVIFGIPIYAVVKIIVSRSFNYFK 372 >gi|296118156|ref|ZP_06836737.1| putative permease [Corynebacterium ammoniagenes DSM 20306] gi|295968714|gb|EFG81958.1| putative permease [Corynebacterium ammoniagenes DSM 20306] Length = 510 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 122/344 (35%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKG-----F---FAPVLSALIIGFTSWPIYSSFISKKEESST 60 + W I +++ +L G F PV+ +LI+ PI S K S+ Sbjct: 71 KSASLWAIRLVVIGFFLYLLGEIIGSFWQGILPVVLSLIVCTVLSPIASKLRQFKFPSA- 129 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++I+ + + + F+ + + L + V Q + W P Sbjct: 130 LASIISILLFVIIVGGIFSFVAPDFARQSQSLYLQAVEGIQR---LQLWAQGPP------ 180 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + S +++ F S G + ++++ M + FFF +D Sbjct: 181 --LNLNAADIGSYVDEVANWIQQQAGSIAGSFISGVGTAT-NVVITLVVMTVMTFFFLKD 237 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + ++++ + +V+G+ + GVP Sbjct: 238 GHKFLPWIRQATSRRAGWHLTEALTRGWNTLGGYIRAQALVSLIDAVVIGAGLYAVGVPL 297 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +AL +IT + IP I A+S+ L+ A + + + L P+ Sbjct: 298 AMALAIITFMAGFIPLIGAIVAGALSVLIALVSLGFTEALIVLGLVLLVQQLEGNVLSPW 357 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + + G L+G F+ A+IAV ++ Sbjct: 358 LQSKAMNLHPVIVLVSVTVGGALFNLIGAFLAVPAAAMIAVFYR 401 >gi|195952761|ref|YP_002121051.1| protein of unknown function UPF0118 [Hydrogenobaculum sp. Y04AAS1] gi|195932373|gb|ACG57073.1| protein of unknown function UPF0118 [Hydrogenobaculum sp. Y04AAS1] Length = 353 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 124/330 (37%), Gaps = 7/330 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y + FF P++ ++I +P++ + S ++I T+ ++ + ++P Sbjct: 25 YTIAPFFTPIVWSMIAIIVFYPLHKKLSHILK-SENLSSLIITILILLIVVIPFSVFGVL 83 Query: 85 GMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + LV ++ +Q + + I G + + L + Sbjct: 84 IIEQGIYLVQNASAFIMSLDQQKVYLISKKLPIIGKHITYYKFLRFLHLNAPTINQAANS 143 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + T F+ + + L + +++ FF RD + + + + Sbjct: 144 ILTYAASFLGDQLKNMVLFLGSFMLKALIFLMSTFFMLRDWDKFIDFVKDITP-MNTKDF 202 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 I + V + S G A+ + + Y+ + L IT + + IP G Sbjct: 203 DTILKTVYSTVLSVVYGFVGTALIQAIFGFFMYYYFTPNYALVLAFITFMSSFIPPLGTA 262 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + Y+ + + + F + + + D +RP L+ I +P++ ++GG Sbjct: 263 LVWIPYGFYVAYQNGLLASLEAFAYSILFIIGSDNFVRPLLMKKAIHIPYILLSLSVLGG 322 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + +MG LG+F+GP++ + + Sbjct: 323 LFSMGFLGMFLGPIVFTTLITAFNIYKEKF 352 >gi|162455888|ref|YP_001618255.1| hypothetical protein sce7606 [Sorangium cellulosum 'So ce 56'] gi|161166470|emb|CAN97775.1| hypothetical protein sce7606 [Sorangium cellulosum 'So ce 56'] Length = 393 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 123/340 (36%), Gaps = 10/340 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ + + + + +I + + +KG PVL ++ P+ + Sbjct: 18 MQQDFQSDRWLSFALRAGLIALFFWMVKGLLVPVLLGGLVALLVSPLQRRLAPRLGRFRQ 77 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F I+TV V+ L +PL + + ++ + + + Sbjct: 78 FAPAISTVGVIILVCIPLAVIIIEASASISRFFAR------DWSNTIERVEGLLNDGRIT 131 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + ++ + G I FA + I+ L++ RD Sbjct: 132 GLLNRAGLSGDDVRTYVSNLFERVGSS-IAGFAGGMVAAVPQTIVDAFLFIVGLYYLLRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + L + + + + LG+ A +G + A + VP Sbjct: 191 GGLLLRWLLTQSP-FRNEETDVLFASIQDTVHGAVLGLLATAAVQGTLTTIALFACKVPG 249 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG++ +++++P G ++YL + G I + A+ + + D +RP+ Sbjct: 250 AFLLGLLATLLSLVPMIGTTPVTLGAAVYLFVVGRIGAGIGMCAA-AVLIGLSDNVIRPW 308 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + L + GG+ G G+FIGPV+ A++ Sbjct: 309 VQSSHGGMHPLIALLAIFGGLELFGAAGIFIGPVVAAIVL 348 >gi|293372558|ref|ZP_06618940.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292632367|gb|EFF50963.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 176 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 1/166 (0%) Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T + Sbjct: 10 PFNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLTCFATI 69 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ FNA LF +GAI + D +R L L T Sbjct: 70 IPMVGTALVWFPVAAYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADTHPLIT 129 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 130 IFGVVIGLPIFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPS 175 >gi|295426406|ref|ZP_06819056.1| membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063774|gb|EFG54732.1| membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 404 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 122/345 (35%), Gaps = 6/345 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F PVL A I + P+ K ++ + V+ I Sbjct: 42 ISFVLNPAWMFFSAILPPVLLATIQFYVMNPVVDWLEKKWRVPRVLTIIVLFLIVVVALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ LV + + P K + + Q Sbjct: 102 WIINTIIPIVQEQINSLVKNWPKIWDDAVNATQNALRDPRLNSVRSNIDKIIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + I S MI ++++ LFF +DG ++ + Sbjct: 162 KSGQTTVNVALTNISSAVSIITMI----IMTLMTAPFLLFFMLKDGHNLRPYITKFAPQR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + K+ + I S G +A G++ Y + G+P L ++ + +IP Sbjct: 218 WQKSFGKLLWDINNAISSYIRGQITVAFWVGVMFAIGYTVVGLPYGYTLAILAGFLNLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I+F + ++ ++ + + AIE I + + P ++G +++ + T Sbjct: 278 YFGTFIAFIPALVIGIMT-SVPMLIKVLIVFAIEQAIEGRVISPLVMGNKLEMHPITTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+G GL G+ G + A++ +I ++ + + Sbjct: 337 LLIGASAVWGLWGVVFGIPIYAVLKIIVSRVYNYYRKVSDVFDDD 381 >gi|294809934|ref|ZP_06768608.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|294442780|gb|EFG11573.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 176 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 1/166 (0%) Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T + Sbjct: 10 PFNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVATIGYLLFGAPNILLLGFLTCFATI 69 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + + V+ YL I G+ FNA + +GAI + D +R L L T Sbjct: 70 IPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADTHPLIT 129 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 FG+V G+ G +G+ GP+L+AL + + + + S Sbjct: 130 IFGVVIGLPLFGFMGVIFGPLLLALFFLFVDMFKKEYLDLRNNLPS 175 >gi|318042146|ref|ZP_07974102.1| hypothetical protein SCB01_10570 [Synechococcus sp. CB0101] Length = 347 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 130/322 (40%), Gaps = 7/322 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F ++ A ++ P++ + + A + V + + + P+ L Sbjct: 24 ILQPFAEILVWASLLAVILKPLHVWLQRRLRLGRWWAAGLIVVVGLLVLLGPVGALAAAL 83 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + ELV V Q P L +IP G LW + L L + Sbjct: 84 LSNVSELVHLVRHGQQSLPQPPTLLVEIPLVGPAIRPLWHGVIGDLHDLLRTHSETLTSL 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G + ++ G+ FL + +S++ + ++ +L L + L P + + + Sbjct: 144 GTRLLETTLAK-GLGFLKFVVSLLVAAL----MLVHSEALLLRLRRLLDRLVPEHSETVQ 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 I +R+ G+ +A + L++G A VP L V+ I+ ++ G P+ Sbjct: 199 LITATTVRNVSRGVVGVAFLQSLLIGLGLVAADVPWSGLLTVVALILCLLQIG-PLPVVI 257 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V++ + L + +++ L+P L+ + +P L G++GG G Sbjct: 258 VALAMAWNHLPPLLALLLSLWLVAATLLEHLLKPLLMARGLPVPMLVILAGVLGGTLKGG 317 Query: 325 LLGLFIGPVLMALIAVIWKESI 346 L GLF+GPVL++L + + Sbjct: 318 LAGLFLGPVLLSLGYHFVRLWV 339 >gi|313123300|ref|YP_004033559.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279863|gb|ADQ60582.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 384 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 118/336 (35%), Gaps = 6/336 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 36 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ + ++ S L SL+ + + Sbjct: 96 QSQIDSLVKNWPTIWKNST---NAVDELLHSPKFSGLRDSLQKQMTSLQKNFSKSMGSTV 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S + + ++ LFF +DG + L + K+ Sbjct: 153 SSALGNLTSAVTVATAVFT-TLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 211 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 V + + S +G +AI G++L Y + G P AL + + + +IP G I Sbjct: 212 EVNQAVSSYVIGQVSVAICVGIMLFIGYTIIGEPYGAALAICSGFLNLIPYFGTFIGLIP 271 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L+ A L ++ IE I + + P +VG +K+ T ++G G Sbjct: 272 ALIIALVTDLSMVAKVLVVF-FIEQIIETRVISPLVVGNRLKMHPATTIVVMLGAGSVWG 330 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L G+ G + A++ ++ ++ +F Sbjct: 331 LWGVIGGIPIYAVMKILLTHVYWYYRKVSHLYDDSF 366 >gi|315231402|ref|YP_004071838.1| hypothetical protein TERMP_01640 [Thermococcus barophilus MP] gi|315184430|gb|ADT84615.1| hypothetical protein TERMP_01640 [Thermococcus barophilus MP] Length = 327 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 137/336 (40%), Gaps = 29/336 (8%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ I+ ++ + +P+ A I+ + +PI+ S+ + A+I T ++ + Sbjct: 11 IVIAILYLAWSTVSQLLSPIFFAAILTYAVYPIHKHLSSRLSIKKS--ALILTAFLILIA 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + V+ W++ + P L Sbjct: 69 TGITIELILIFKNVLMSFYEDVIAFIS---------------------WSQTFTFPFGLT 107 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + F F + + Y L ++ ++ ++F +I +Q+ L Sbjct: 108 NVIQKFYAQFTPKF-SEYILSYTFSIPKYLLQLVIFVVMFYYFLVSSEAIRRQISLLLPQ 166 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA---GVPSHVALGVITAIM 251 K+ + +++ ++ I +G+++ + + VP+ V G +T + Sbjct: 167 ENKELANKLLKRADLTLQALIRAWLLLNIAKGILMTLGFIVFQVSDVPTAVIAGFLTVLF 226 Query: 252 AMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPF 309 + +P + + A +IYL GN+ A L ++G + + + D T+RP LV +L Sbjct: 227 SFVPLFEGWMIWLAGAIYLFKNGNVITAILLAVYGFVFVSPLPDFTVRPKLVAKGAQLDE 286 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G++GG + G+ GL IGP+++ L+ + KE Sbjct: 287 VMVLVGMIGGAWSFGVKGLIIGPIVLNLVVALLKEW 322 >gi|256851487|ref|ZP_05556876.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260660908|ref|ZP_05861823.1| permease [Lactobacillus jensenii 115-3-CHN] gi|256616549|gb|EEU21737.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260548630|gb|EEX24605.1| permease [Lactobacillus jensenii 115-3-CHN] Length = 395 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 127/336 (37%), Gaps = 6/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI+ + F P++ AL+ + PI F K + T ++ + V+ I Sbjct: 36 ISFILNPAWVFFCAILPPLILALVQYYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALI 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + L P + + Sbjct: 96 WVINSLLPIIQGQVDVLIKNWPNIWDTSVKTTQNLLHDPHLKGFKSNINSVIDSVEKTLF 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S MIF ++++ LF+ +DG ++ L Sbjct: 156 KSWQKTGTAALTNISSAVSVITMIF----MTLLTAPFVLFYMLKDGHQLNGCLTKFAPRR 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + I + G +A+ G++ Y + G+P AL V+ A M +IP Sbjct: 212 WQDSFSRLLHDINEAISAYIRGQITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIP 271 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I+ V I I + + + AIE I + + P +VG +K+ + T Sbjct: 272 YFGTFIALIPVLIIASIT-SWGMLINVLIVFAIEQTIETRFISPIVVGNKMKMHPITTIL 330 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+G GL G+ G + A++ +I S K Sbjct: 331 LLIGASAVWGLWGVIFGIPIYAVVKIIVSRSFNYFK 366 >gi|157415601|ref|YP_001482857.1| hypothetical protein C8J_1281 [Campylobacter jejuni subsp. jejuni 81116] gi|283956749|ref|ZP_06374225.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 1336] gi|157386565|gb|ABV52880.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 81116] gi|283791724|gb|EFC30517.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 1336] gi|307748244|gb|ADN91514.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] Length = 347 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P E K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFAS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYVILKDKN 345 >gi|28378815|ref|NP_785707.1| transport protein [Lactobacillus plantarum WCFS1] gi|254557021|ref|YP_003063438.1| transport protein [Lactobacillus plantarum JDM1] gi|300768859|ref|ZP_07078753.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28271652|emb|CAD64558.1| transport protein [Lactobacillus plantarum WCFS1] gi|254045948|gb|ACT62741.1| transport protein [Lactobacillus plantarum JDM1] gi|300493592|gb|EFK28766.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 384 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 138/363 (38%), Gaps = 23/363 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFL-----------KGFFA----PVLSALIIGFTSWPIYSSF 51 + Q ++R +++ +++++++F+ + FF+ P++ A ++ + P+ Sbjct: 11 SAQRLIRILVVILLVLTIFFMGKQVDWLLDPVRQFFSIVGLPIILAGVLYYLLNPLVDWL 70 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWL 110 + T+ + + V+ L + ++ + + +++ V RWL Sbjct: 71 EKRFRVRRTWTIIGLFIVVVALLALGIIAIIPTIRDQTLSIINDWPNYWKNASTEVNRWL 130 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +D +L + + + + +L + + +I M Sbjct: 131 NDPQLSSIRDQLESWNTDLSKLVSGRFSKYLTGT-----VTSLTGVFSTVTTVIIGLITM 185 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RDG + + + + + ++ + + + G +A ++ Sbjct: 186 PFILFYLLRDGHQLPKYMAKFVPTKARSGFLEVLTEINSQVSNYIRGQLTVAFFVAVMFA 245 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 Y + G+ + LG+ I+ +IP G+ ++ + L+ L ++ IE Sbjct: 246 VGYSIIGLKFALTLGIAAGILNLIPYLGSFLAMVPSVVIALVTSPWMLVQVLIVF-VIEQ 304 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P ++G + + + L+ + GL+G+ G A++ V+W Sbjct: 305 TIEGRFISPLVLGSSLAIHPITILVVLLAAGKIFGLMGVIFGIPGYAILKVLWTHLFDWY 364 Query: 350 KEN 352 + + Sbjct: 365 RRS 367 >gi|315931421|gb|EFV10389.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 347 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P E K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFTS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYVILKDKN 345 >gi|225022466|ref|ZP_03711658.1| hypothetical protein CORMATOL_02506 [Corynebacterium matruchotii ATCC 33806] gi|224944705|gb|EEG25914.1| hypothetical protein CORMATOL_02506 [Corynebacterium matruchotii ATCC 33806] Length = 430 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 116/339 (34%), Gaps = 20/339 (5%) Query: 11 IMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++IM L+ + PVL A+I+ WP K + ++ Sbjct: 37 ALRFIIMVAAGYLLWRGLALVWEGLLPVLLAIIVSTVLWPPVRWLRKHK-----VPSALS 91 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTK 125 V V+ F L +F + + GI + +W+ P Sbjct: 92 VVIVLITFFAILGGIFTAMAPSITTQSKDLAEQATKGIEQLQQWIQGPP--------LNI 143 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L H + TFL+ D R S ++ + M++ FFF +DG Sbjct: 144 DLGHYNDIIDQISTFLQNRVTDIASRVVSGI-STAGSIVVTFVLMLVLTFFFLKDGEGFL 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + II+ + + + VP AL Sbjct: 203 PMIRRTTGYNVGWHLTEVLTRIWNTLSGFIRVQAIISFVDASCICIGLLILHVPLAPALA 262 Query: 246 VITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT + IP + A++ I L+ + NA + + L+P L Sbjct: 263 VITFFASFIPIVGALVAGALAVIIALVSNGVTNALLVLAIIIAVQQLEGHILQPVLQSKA 322 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A ++V+ + Sbjct: 323 MNLHAAIVLLSVTIGSTMFGVVGAFLAVPVAATLSVLVR 361 >gi|223039328|ref|ZP_03609617.1| acid membrane antigen A [Campylobacter rectus RM3267] gi|222879389|gb|EEF14481.1| acid membrane antigen A [Campylobacter rectus RM3267] Length = 346 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 68/352 (19%), Positives = 137/352 (38%), Gaps = 23/352 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + Y K F + A ++ + I F+ + T A + Sbjct: 1 MNNRVFFGIFALCALALVAYLFKPFLLNIFIAALLAVATSNINVKFLQLTKGKKTLSAAL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + LFI P L+ + V + +P + E Sbjct: 61 TTIVLFSLFIAPFLYAVIEIARNAASFNTSYVTNTLDYFQSGNF--QLPEPIKFME---- 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P+ +I+++ +K + I A G +++ + ++F+++ FF G ++ Sbjct: 115 ----PKIKEIIADIDVKAISANIIANLAG-IGKSSVNFLIDMVFILVFFFFAILYGSELA 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L S + + + I V V+ + + AI +G + G + +G Sbjct: 170 GYLKSALP-MKESESEFILSEVVNVMSVVLYSIVLNAILQGCLFAIIMISYGY-NGFLMG 227 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF---- 299 +I A ++IP G +++ +S+Y GN A + ++ + + IV D L+P Sbjct: 228 IIFAFTSLIPVVGGLLAWGPISLYEFANGNTAAAVVIAVYTVVVISIVADTFLKPIVIKF 287 Query: 300 ----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LV P K+ L FF ++ G+ T G GL +GP ++ K + Sbjct: 288 INDRLVKIPAKINELLIFFSMIAGISTFGFWGLILGPAIVTFFISTIKLYTL 339 >gi|237785192|ref|YP_002905897.1| putative permease family transporter [Corynebacterium kroppenstedtii DSM 44385] gi|237758104|gb|ACR17354.1| transporter of the putative permease family [Corynebacterium kroppenstedtii DSM 44385] Length = 448 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 106/324 (32%), Gaps = 15/324 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+L ALII W + A+++ + + + + + + + Sbjct: 103 VLPILIALIICTLLWVPTNWMRKAHFPR-WLAALVSVLGALAIIVGLFSLIAPSAVEQSS 161 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + + + V ++ P + +K++ I Sbjct: 162 QLADQSIKGLEK---VQNYVQGPP--------LNLNDQQVNDYLDEGIDKIKSSSDQIIA 210 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + + +++ FFF +DG L + + ++ + Sbjct: 211 GVVTGVNKAS-ELAVMLGVILMITFFFLKDGDRFLPWLGKISGKRGEGHIVELLQRSWNT 269 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI-YL 269 + ++++ + +G + VP + L VIT + IP I AV++ Sbjct: 270 LGGFIRAQAVVSLIDAFFIGLGLIILNVPLALPLAVITFMGGFIPIVGAIVAGAVAVLIA 329 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ + A + + L P L + L + + G G++G F Sbjct: 330 LVSNGLTTALIVLAIIIAVQQLEGNVLSPVLQSKAMNLHPVIVLLSVTVGSNLYGIIGAF 389 Query: 330 IGPVLMALIAVIWKESIMAIKENK 353 + +MA +W + + + Sbjct: 390 LAVPVMA-TIAVWLRYFSELIDKE 412 >gi|86151004|ref|ZP_01069220.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315124803|ref|YP_004066807.1| hypothetical protein ICDCCJ07001_1299 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842174|gb|EAQ59420.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315018525|gb|ADT66618.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 347 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYAMIELAKALKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P E K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFAS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYVILKDKN 345 >gi|305431582|ref|ZP_07400756.1| acid membrane antigen A [Campylobacter coli JV20] gi|304445389|gb|EFM38028.1| acid membrane antigen A [Campylobacter coli JV20] Length = 347 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 141/358 (39%), Gaps = 23/358 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + I+ ++ + LY KGF ++ A ++ + + F+S ++ Sbjct: 1 MQTGKIFLICFILVVLSLLLYLFKGFLLVIIIASLMAVATSNANAKFLSLTNGRKFLASM 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K + L Q V + +P + E Sbjct: 61 LTTACMVLLFFAPFVYAMIELAKALKNF--DINLVTQTLNYVKNYQFTLPESLSFLEPKI 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K L +S+ L +AS F + + ++ + I FF G + Sbjct: 119 KEFLASIDLNSISKQIL---------NYASSFTKSGAKFLIDMVLICIFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + S+ + I V V+ M IIAI +G + G + + Sbjct: 170 VIYIKSVIP-IDKQELDDILSEVGNVMAVVLYSMIIIAILQGALFSIIAMFYGYD-AILM 227 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--- 299 GVI A+ ++IP G + + +S+Y ++ +A +F++ + + FI D ++P Sbjct: 228 GVIFAVSSLIPALGGALVYIPISLYEFASSSLGSALVIFIYSVVVISFIADTLVKPLIIK 287 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV P K+ L F ++ G+ T G G+ +GP ++ + ++ +N Sbjct: 288 WINEKLVKTPAKINELLIFLAMIAGISTFGFWGIILGPAILTFFISTIRLYMILKDKN 345 >gi|205356191|ref|ZP_03222958.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8421] gi|205346034|gb|EDZ32670.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8421] Length = 312 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 23/323 (7%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 + + I + F++ + +++ T ++ LF P ++ +K + L Sbjct: 1 MAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYAMIELAKALKNF--DINLV 58 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 Q V + +P E K L +S+ L +AS F Sbjct: 59 TQTLDYVKNYQFTLPESFNFLEPKIKEFLASVDLNSISKQIL---------SYASSFTKS 109 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + + ++ + + FF G + L S+ + + V V+ M Sbjct: 110 GAKFLIDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAVVLYSMV 168 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 I+AI +G + G G + +GVI A+ ++IP G + + VS+Y N+ +A Sbjct: 169 IVAIFQGALFGLITMFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSA 227 Query: 279 TCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +F++ I + FI D ++P LV P K+ L F ++ G+ T G G+ Sbjct: 228 LVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGII 287 Query: 330 IGPVLMALIAVIWKESIMAIKEN 352 +GP ++ + ++ +N Sbjct: 288 LGPAILTFFVSTLRMYVILKDKN 310 >gi|104773700|ref|YP_618680.1| hypothetical protein Ldb0590 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513697|ref|YP_812603.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422781|emb|CAI97420.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093012|gb|ABJ58165.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125348|gb|ADY84678.1| Putative permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 378 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 117/336 (34%), Gaps = 6/336 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 48 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ + ++ S L SL+ + + Sbjct: 108 QSQIDSLVKNWPTIWKNST---NAVDELLHSPKFSGLRDSLQKQMTSLQKNFSKSMGSTV 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S + + ++ LFF +DG + L + K+ Sbjct: 165 SSALGNLTSAVTVATAVFT-TLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 V + + S +G +AI G++ Y + G P AL + + +IP GA I Sbjct: 224 EVNQAVSSYVIGQVSVAICVGIMFFIGYTIIGEPYGAALAICAGFLNLIPYFGAFIGLIP 283 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L+ A L ++ IE I + + P +VG +K+ T ++G G Sbjct: 284 ALIIALVTDLPMVAKVLVVF-FIEQIIETRVISPLVVGNRLKMHPATTIIVMLGAGSVWG 342 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L G+ G + A++ ++ ++ +F Sbjct: 343 LWGVIGGIPIYAVMKILLTHVYRYYRKVSHLYDDSF 378 >gi|308181014|ref|YP_003925142.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046505|gb|ADN99048.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 384 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 139/363 (38%), Gaps = 23/363 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFL-----------KGFFA----PVLSALIIGFTSWPIYSSF 51 + Q ++R +++ +++++++F+ + FF+ P++ A ++ + P+ Sbjct: 11 SAQRLIRILVVILLVLTIFFMGKQVDWLLDPVRQFFSIVGLPIILAGVLYYLLNPLVDWL 70 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWL 110 + T+ + + V+ L + ++ + + +++ V RWL Sbjct: 71 EKRFRVRRTWTIIGLFIVVVALLALGIIAIIPTIRDQTLSIINDWPNYWKNASTEVNRWL 130 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +D +L + + + + +L + + +I M Sbjct: 131 NDPQLSSIRDQLESWNTDLSKLVSGRFSKYLTGT-----VTSLTGVFSTVTTVIIGLITM 185 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RDG + + + + + ++ + + + G +A ++ Sbjct: 186 PFILFYLLRDGHQLPKYMAKFVPTKARSGFLEVLSEINSQVSNYIRGQLTVAFFVAVMFA 245 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + Y + G+ + LG+ I+ +IP G+ ++ + L+ L ++ IE Sbjct: 246 AGYSIIGLKFALTLGIAAGILNLIPYLGSFLAMVPSVVIALVTSPWMLVQVLIVF-VIEQ 304 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P ++G + + + L+ + GL+G+ G A++ V+W Sbjct: 305 TIEGRFISPLVLGSSLAIHPITILVVLLAAGKIFGLMGVIFGIPGYAILKVLWTHLFDWY 364 Query: 350 KEN 352 + + Sbjct: 365 RRS 367 >gi|229495330|ref|ZP_04389065.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] gi|229317773|gb|EEN83671.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] Length = 328 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 99/301 (32%), Gaps = 16/301 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + + L A+ + K A + + + LF++PL + + Sbjct: 41 LPYLSGFLGAITLFSILRGQMRFLTKKWHFPRWLAAFLLILETLFLFLLPLAGIASMLID 100 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 L + I + W W E + Sbjct: 101 ----------LFTHNHIDLNEWYHQ--AVQWVDEAKEWIGVDFVKRDGFFVEQVLPALTK 148 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F ++ + ++ + ++ L++ + + L + + Sbjct: 149 MGQTFTTKIVVGVYSLVVNSVVLLFVLYYMLYEREYFETAIRELLP-FTEENKRILVSET 207 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 ++I + +G+ +IAI +G Y GV + V+TA +IP G + + ++ Sbjct: 208 QRIIAANAVGIPLIAIVQGGFAYLGYIFFGVEGALFYAVLTAFATIIPMVGTMVVYVPLA 267 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG--VRTMG 324 + GN + L ++G + + +D +R L + L T FG++ G + G Sbjct: 268 LAFGFAGNWGSCIGLLIYGFLVIGGIDNVIRFLLQKSLADIHPLVTVFGVIFGVSILVFG 327 Query: 325 L 325 + Sbjct: 328 V 328 >gi|238854901|ref|ZP_04645231.1| transport protein [Lactobacillus jensenii 269-3] gi|282931613|ref|ZP_06337106.1| permease [Lactobacillus jensenii 208-1] gi|238832691|gb|EEQ24998.1| transport protein [Lactobacillus jensenii 269-3] gi|281304224|gb|EFA96333.1| permease [Lactobacillus jensenii 208-1] Length = 401 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 115/310 (37%), Gaps = 6/310 (1%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + PI F K + T ++ + V+ I + L ++ L+ Sbjct: 68 YMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALIWIINSLLPIIQNQVDALIKNWPNIWD 127 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + L P + + S T + I S MIF Sbjct: 128 TSVKTIQNLLHDPHLKGVKSNINSVIDSIEKTLFKSWQDTGTAALTNISSAVSVITMIF- 186 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 ++++ LF+ +DG ++ L + + ++ + + I + G + Sbjct: 187 ---MTLLTAPFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQITV 243 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC 280 A+ G++ Y + G+P AL V+ A M +IP G I+ V I I + Sbjct: 244 AVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASIT-SWGMLIN 302 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + AIE I + + P +VG +K+ + T L+G GL G+ G + A++ + Sbjct: 303 VLIVFAIEQTIETRFISPIIVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIYAVVKI 362 Query: 341 IWKESIMAIK 350 + S K Sbjct: 363 VVSRSFNYFK 372 >gi|57168276|ref|ZP_00367415.1| acid membrane antigen A Cj1363 [Campylobacter coli RM2228] gi|57020650|gb|EAL57319.1| acid membrane antigen A Cj1363 [Campylobacter coli RM2228] Length = 347 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 140/358 (39%), Gaps = 23/358 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + I+ ++ + LY KGF ++ A ++ + + F+S ++ Sbjct: 1 MQTGKIFLICFILVVLSLLLYLFKGFLLVIIIASLMAVATSNANAKFLSLTNGRKFLASM 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K + L Q V + +P + E Sbjct: 61 LTTACMVLLFFAPFVYAMIELAKALKNF--DINLVTQTLNYVKNYQFTLPESLSFLEPKI 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K L +S+ L +AS F + + ++ + I FF G + Sbjct: 119 KEFLASIDLNSISKQIL---------NYASSFTKSGAKFLIDMVLICIFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + S+ + I V V+ M IIAI +G + G + + Sbjct: 170 VIYIKSVIP-IDKQELDDILSEVGNVMAVVLYSMIIIAILQGALFSIIAMFYGYD-AILM 227 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF--- 299 GVI A+ ++IP G + + +S+Y + +A +F++ + + FI D ++P Sbjct: 228 GVIFAVSSLIPALGGALVYIPISLYEFASSGLGSALVIFIYSVVVISFIADTLVKPLIIK 287 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV P K+ L F ++ G+ T G G+ +GP ++ + ++ +N Sbjct: 288 WINEKLVKTPAKINELLIFLAMIAGISTFGFWGIILGPAILTFFISTIRLYMILKDKN 345 >gi|153952049|ref|YP_001397505.1| hypothetical protein JJD26997_0286 [Campylobacter jejuni subsp. doylei 269.97] gi|152939495|gb|ABS44236.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 347 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYGMIELAKALKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P E K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SNFTKSGAKFLVDMVLICVFYFFANLYGTELVIYLKSIVP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFAS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIIISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYVILKDKN 345 >gi|54026317|ref|YP_120559.1| hypothetical protein nfa43460 [Nocardia farcinica IFM 10152] gi|54017825|dbj|BAD59195.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 408 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 109/311 (35%), Gaps = 17/311 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L+ + PV AL++ WP + A ++ + + + + Sbjct: 76 IALLWVI---VLPVALALVVATVLWPPTRWLTNH-GVRPGLAATLSVLGFLGILAGVIAL 131 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + +L K V WL P + +L + L+ +E Sbjct: 132 IVPSVADQAPDLADKASEGINK---VRDWLRGPPLRIRDEQLDQAVDTIGNRLQSSAEQ- 187 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I +++ +++ FFF +DG L S+ ++ Sbjct: 188 --------IATGVFSGVTTATSALITLFLVLVLAFFFIKDGPKFLPWLHSVTGAGAGRHF 239 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 +++ + + ++++ + +++G+ + GVP + L V+T I IP GA Sbjct: 240 EEVLNRIWVTLGGFIRTQALVSLIDAVLIGAGLVILGVPLSLVLAVLTFIGGFIPIVGAF 299 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + L+ + A + + L+P L ++L + + G Sbjct: 300 VAGALAVLVALVANGVTTALIVLAIIIAVQQLEGNILQPVLQSRSMQLHAVVVLLAVTAG 359 Query: 320 VRTMGLLGLFI 330 G++G F+ Sbjct: 360 GSLYGIVGAFL 370 >gi|227893168|ref|ZP_04010973.1| permease [Lactobacillus ultunensis DSM 16047] gi|227865034|gb|EEJ72455.1| permease [Lactobacillus ultunensis DSM 16047] Length = 400 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 124/340 (36%), Gaps = 6/340 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 42 ISFVLNPAWVFFSAVLPPLLLAIIQYYIMNPVVDWFEKKFKVPRVATIIVLFLFVIIALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ LV + + P + + Q Sbjct: 102 WIINILVPMAQNQINSLVKNWPHIWNDAVNTTQSALRDPRLSPVKGSLKSMIDNTQRTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + I S MI ++++ LFF +DG + + Sbjct: 162 KSGQSTVNATLGNISSAVSIITMI----VMTLLTAPFILFFMLKDGHQLRPYITKFAPEN 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A + K+ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 218 WQASFSKLLYDINYALASYIRGQITVAFWVGVMFTIGYIVIGLPYGLALAILAGFMNLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G P++ V + ++ ++ + + IE I + L P ++G +++ + T Sbjct: 278 YFGTPLALIPVIVIAVMT-SVPMLIKVLVIFVIEQAIETRILSPLVMGNKMEMHPVTTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G GL G+ G + A++ +I + E Sbjct: 337 LLIGASSVWGLWGVIFGIPIYAILKIIVSRVYNYYRRESE 376 >gi|319440952|ref|ZP_07990108.1| hypothetical protein CvarD4_04205 [Corynebacterium variabile DSM 44702] Length = 503 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 114/337 (33%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R++++ L+ L P++ ++I+ WP+ + + + Sbjct: 117 LRFLVIAAAGYILWIGSAKLWAGILPIILSIIVCTVLWPLSRQLRKWHFPNP-LAVLTSL 175 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +F + + + + ELV K Q + W++ P + + ++ Sbjct: 176 LVFFGVFAGIIAAIVPSVVDQAGELVDKGTEGVQK---IQDWVAGPPLELQSDQIDNAID 232 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L+ ++ +T ++ ++ + F +DG Sbjct: 233 QATNRLQDSTDQITQTAVAGVSAVTSAIVTLVVVLVLTFF---------FLKDGEKFLPM 283 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + I++ + +G ++ GVP L +I Sbjct: 284 VRRVTGRRVGWHITEALTRCWNTLGGFIRTQAIVSFIDAFFIGLGLFILGVPLAGPLAII 343 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP + A+S+ + + G + A + L + L P L + Sbjct: 344 TFFAGFIPIVGAFTAGALSVLVALVGNDFTTALIVLLIVIAVQQLEGNVLSPVLQSRAMN 403 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IA I + Sbjct: 404 LHPVVVLLSVTVGGGLWGIIGAFLAVPVAAMIAEILR 440 >gi|150400408|ref|YP_001324175.1| hypothetical protein Mevan_1671 [Methanococcus vannielii SB] gi|150013111|gb|ABR55563.1| protein of unknown function UPF0118 [Methanococcus vannielii SB] Length = 334 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 137/335 (40%), Gaps = 21/335 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R +++F + LY L F + V A+ + + + P+Y++ K + Sbjct: 9 LKRLLMLFSVFALLYMLWPFVSIVSIAIAVAYMAKPLYNNLWPKLGR------TYGAFTC 62 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +VP++ L + ++ + + + + +L+++ +L +S Sbjct: 63 LLGIVVPMILLVLLVIKDVVFFLVSLDVRI-----MVDFLTNVVSHFEFLQLNESDISKI 117 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + I S + L + L+ F +DG+ I S Sbjct: 118 VSELWKLSKPILDSIASQISAIPSLMMKLLLLFFLTFYF--------LKDGYKIKDIFLS 169 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + R V + F+G + ++ G++ Y L GVP+ + LG ++ I Sbjct: 170 YVPEDRKEHATLVIREVHAAFKILFIGNAVTSLCVGIISIIGYSLMGVPNSITLGALSGI 229 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLP 308 + ++P G + ++IY L+ G+I + + L+G I L + D +RP +V L Sbjct: 230 LNILPVVGGWTIYFPLTIYYLLIGDITKSILILLFGIIFLSLAPDFAIRPKIVAKSSDLH 289 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G G+ GL IGP+++ + + K Sbjct: 290 PVLVLIAFLVGPLAFGISGLAIGPIIVGTVYAVHK 324 >gi|86149982|ref|ZP_01068210.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152766|ref|ZP_01070971.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596022|ref|ZP_01099259.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|121612486|ref|YP_001001021.1| hypothetical protein CJJ81176_1365 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005924|ref|ZP_02271682.1| hypothetical protein Cjejjejuni_07165 [Campylobacter jejuni subsp. jejuni 81-176] gi|218562972|ref|YP_002344751.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839428|gb|EAQ56689.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|85843651|gb|EAQ60861.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249909|gb|EAQ72868.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|88190863|gb|EAQ94835.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360678|emb|CAL35475.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926583|gb|ADC28935.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni IA3902] gi|315929282|gb|EFV08495.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 347 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P E K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITIFYGYDG-ILMGVIFAVSSLIPAIGGALIYMPVSLYEFAS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYVILKDKN 345 >gi|227540838|ref|ZP_03970887.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183370|gb|EEI64342.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 460 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 96/302 (31%), Gaps = 16/302 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+L A+++ WP K ++ + + F+ + Sbjct: 91 ILPILIAVLLCTVLWPPTKWMKDHK-----IPITLSVILTLLGFVAIFSAVVAAIAPTFS 145 Query: 91 ELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ + + G+ + W+ P A ++ L+ + I Sbjct: 146 TQGKRLFESGKEGVYQLGDWIQGPPLNAQAEQVDQVIDEVFGWLQDQASN---------I 196 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ +I FFF +DG + + + + ++ Sbjct: 197 ASGVFSGLSAASSALVTFGVAVILSFFFLKDGSKLLPTIRGVVGQNVGWHLSEVLTRTWN 256 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + ++ + +++G W+ VP +AL VIT IP GA + + Sbjct: 257 TLGGYIRAQAAVSAIDAVIIGLGLWILKVPMALALAVITFFAGFIPIVGAFSAGALAVLI 316 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G + A + + + L P L + L + + G G++G Sbjct: 317 ALVDGGLKTAIFALILIVLVQQLEGNILSPMLQSKAMDLHPVVVLLSVTVGGGLFGIIGA 376 Query: 329 FI 330 F+ Sbjct: 377 FL 378 >gi|227489249|ref|ZP_03919565.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090780|gb|EEI26092.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 460 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 96/302 (31%), Gaps = 16/302 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+L A+++ WP K ++ + + F+ + Sbjct: 91 ILPILIAVLLCTVLWPPTKWMKDHK-----IPITLSVILTLLGFVAIFSAVVAAIAPTFS 145 Query: 91 ELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ + + G+ + W+ P A ++ L+ + I Sbjct: 146 TQGKRLFESGKEGVYQLGDWIQGPPLNAQAEQVDQVIDEVFGWLQDQASN---------I 196 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ +I FFF +DG + + + + ++ Sbjct: 197 ASGVFSGLSAASSALVTFGVAVILSFFFLKDGSKLLPTIRGVVGQNVGWHLSEVLTRTWN 256 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + ++ + +++G W+ VP +AL VIT IP GA + + Sbjct: 257 TLGGYIRAQAAVSAIDAVIIGLGLWILKVPMALALAVITFFAGFIPIVGAFSAGALAVLI 316 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G + A + + + L P L + L + + G G++G Sbjct: 317 ALVDGGLKTAIFALILIVLVQQLEGNILSPMLQSKAMDLHPVVVLLSVTVGGGLFGIIGA 376 Query: 329 FI 330 F+ Sbjct: 377 FL 378 >gi|289446691|ref|ZP_06436435.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289419649|gb|EFD16850.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length = 311 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 96/277 (34%), Gaps = 5/277 (1%) Query: 77 PLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 P+ L ++++ +V V + + G++ + +L+ Sbjct: 2 PVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDKILQFVNGLFDRVPFLHITVTADALR 61 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + G + F S I + + + + L Sbjct: 62 KAMISVAQNVGEWLLH-FLRDAAGSLAGVITSAIIFVYVFVALLVNREKLRTLIGQLNP- 119 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAM 253 L + + ++R T G +IA +G+ ++ ++AG ++ +++ Sbjct: 120 LGEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFHHGFFIFAIVLTALSI 179 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP G I I ++ GNI + LW + + +D LRP LV +L Sbjct: 180 IPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNIDNVLRPILVPRDARLNSALML 239 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G+ G G+ IGPVLM LI + K Sbjct: 240 LSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLAVYK 276 >gi|41614957|ref|NP_963455.1| hypothetical protein NEQ162 [Nanoarchaeum equitans Kin4-M] gi|40068681|gb|AAR39016.1| NEQ162 [Nanoarchaeum equitans Kin4-M] Length = 327 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 121/331 (36%), Gaps = 32/331 (9%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++++ + L F + + +I + WP+Y + A+ + + Sbjct: 4 ILILLAVVLIIVFFILLPFIPYIATGAVIAYFLWPLYKRLSKFVPKR--IAALGLIIVLG 61 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + +E+ + + ++ V ++L Sbjct: 62 LIIGATTYYSSLVLYVELSKYLPTIIKQYSSNQMVGKYL--------------------- 100 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I +A+ + D L I +++ ++F DG + + Sbjct: 101 -------PIVLQKLYPTILDYATSLIKLLPDMFLGIFIAMLSAYYFLLDGQKAIDYIINW 153 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +I + + +G A+ + +V + + + + L ++ I+ Sbjct: 154 IAESKEDR-NQIINTTKSYLDAVIIGTIFGALAQAVVSYIGFLILNIKLALVLSILVFIV 212 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A++P G + + +++Y ++ NI ++G + ++D +R F V + L Sbjct: 213 AILPIVGPSMIWVLLALYYFMQNNISFTIFSLVYGLFVVGLIDNIVRMFTVSSKADIHPL 272 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++GG MG GLF+GPVL+ L + Sbjct: 273 LAALSMIGGSILMGFAGLFLGPVLVGLALSL 303 >gi|255325572|ref|ZP_05366672.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255297360|gb|EET76677.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length = 457 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 129/344 (37%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA--------PVLSALIIGFTSWPIYSSFISKKEESST 60 + + + ++FI++V+ L G+ PVL A+++ +PI + SK + Sbjct: 70 RTMAKVSVVFILIVAGLALAGYLLKFIWVGLLPVLLAILVSTVLYPISAWLRSK-GFPRS 128 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV + ++ +F + + + L+ + + + P + + Sbjct: 129 LAAVSTLLGLIIIFCGVFAAMAPVVTSQSQTLIDQAEDGIN---QITEMVEKSPIDIQSD 185 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L QS+ F K S F + ++ + M+ FF +D Sbjct: 186 QL--------QSVLQDVVKFAKGQASTIATGVISGF-SMASSIVVAALIMLFVTFFIIKD 236 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + ++ + K + +A+ + +++G W+ VP Sbjct: 237 GDKFLPWLRKYTGNSTGWHVTELGARIWKTLSGFIQAQAAVAMVDAVLIGLGLWVLQVPL 296 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + V+T + IP ++ A++I + L+ + NA I + L+P Sbjct: 297 ALVIAVVTFFASFIPIIGAVTAGALAIIIALVSNGLTNALLALALIIIVQQVEGNVLQPM 356 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + G G++G F+ + A IAV+ + Sbjct: 357 LQSKAMGLHAAIVLLSVTVGSTLAGIVGAFLAVPVAATIAVVVR 400 >gi|283954986|ref|ZP_06372493.1| hypothetical protein C414_000350024 [Campylobacter jejuni subsp. jejuni 414] gi|283793484|gb|EFC32246.1| hypothetical protein C414_000350024 [Campylobacter jejuni subsp. jejuni 414] Length = 347 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 129/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFTPFVYTMIELAKASKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLYPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SSFTKSGAKFLVDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGTLFGLITMFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFAS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ ++N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYMILKEKN 345 >gi|57238407|ref|YP_179538.1| hypothetical protein CJE1555 [Campylobacter jejuni RM1221] gi|148926718|ref|ZP_01810398.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8486] gi|57167211|gb|AAW35990.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|145845082|gb|EDK22178.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8486] gi|315058837|gb|ADT73166.1| Acid membrane antigen A [Campylobacter jejuni subsp. jejuni S3] Length = 347 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 23/329 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYAMIELAKALKNF- 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L Q V + +P E K L +S+ L +A Sbjct: 89 -DINLVTQTLDYVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQIL---------SYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIP-IDKKELDDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITIFYGYDG-ILMGVIFAVSSLIPAIGGALIYVPVSLYEFAS 256 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 257 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 317 GFWGIILGPAILTFFVSTLRMYVILKDKN 345 >gi|293189386|ref|ZP_06608109.1| putative permease [Actinomyces odontolyticus F0309] gi|292821849|gb|EFF80785.1| putative permease [Actinomyces odontolyticus F0309] Length = 458 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 107/329 (32%), Gaps = 9/329 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ +L + L PV AL + P+ S + S+ A + + + Sbjct: 38 LVLAVLWGIARLTIVIMPVAIALTVAVLLEPLVSWMRRRLHFPSSLAATVGLLVFFAVVA 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIPGGMWASELWTKHLSHPQS 132 L + ++ +L S+ + + +L D P + + L Sbjct: 98 GALSQAAAELIQQVPQLASEAADGFRKLLDAIVHNEFLQDGPLKIDTTVLTAAAEQLRSE 157 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + + + A S + M+ LFFF ++G SI L Sbjct: 158 LVNWL-----NSNKETLATGALSITSSVGTLATSGLTMLFCLFFFLKEGRSIWLWCVRLL 212 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + S +A + + + + GVP + +GVIT A Sbjct: 213 PAPARVPVHESAIRGWATFGSYVRTQIQVAAIDAIGIALGAFFLGVPLAIPIGVITFFAA 272 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P GA S + + G + A + + + + L+PF++ + L + Sbjct: 273 FVPILGALTSGVIAVLVAAVNGGLTKAIIMLVIILVVQQVESNILQPFMMSNAVSLHPVA 332 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + G G+ G + A I Sbjct: 333 VMLVITAGSAIAGIAGAVFSVPIAAFINA 361 >gi|311740449|ref|ZP_07714277.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304495|gb|EFQ80570.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 457 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 129/344 (37%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA--------PVLSALIIGFTSWPIYSSFISKKEESST 60 + + + ++FI++V+ L G+ PVL A+++ +PI + +K + Sbjct: 70 RTMAKVSVIFILIVAGLALAGYLLKFIWVGLLPVLLAILVSTVLYPISAWLRAK-GFPRS 128 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV + ++ +F + + + L+++ + + P + + Sbjct: 129 LAAVSTLLGLIIVFCGVFAAMAPVVTSQSQTLINQAEDGIN---QITEMVEKSPIDIQSD 185 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L QS+ F K S F + ++ + M+ FF +D Sbjct: 186 QL--------QSVLEDVVKFAKGQASTIATGVISGF-SMASSIVVAALIMLFVTFFIIKD 236 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + ++ + K + +A+ + +++G W+ VP Sbjct: 237 GDKFLPWLRKYTGNSTGWHVTELGARIWKTLSGFIQAQAAVAMVDAVLIGLGLWVLQVPL 296 Query: 241 HVALGVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + V+T + IP ++ A++ I L+ + NA I + L+P Sbjct: 297 ALVIAVVTFFASFIPIIGAVTAGALAVIIALVSNGLTNALLALALIIIVQQVEGNVLQPM 356 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + G G++G F+ + A IAV+ + Sbjct: 357 LQSKAMGLHAAVVLLSVTVGSTLAGIVGAFLAVPVAATIAVVVR 400 >gi|328461853|gb|EGF34075.1| putative permease [Lactobacillus helveticus MTCC 5463] Length = 350 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 117/330 (35%), Gaps = 6/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P+L A+I + P+ F K + ++ + V+ I + L Sbjct: 3 IFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALIWIINILVPIA 62 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L+ + + P + + Q S Sbjct: 63 QNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLFKSGQSTINAT 122 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I I S MI ++++ LFF +DG + + + + + ++ Sbjct: 123 IGNISSAVSIITMI----VMTLLTAPFILFFMLKDGHQLRPYITKFAPEHWQSSFSQLLY 178 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + S G +A G++ Y + G+P +AL ++ M +IP G P++ Sbjct: 179 DINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIPYFGTPLALIP 238 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V + ++ + + IE I + L P ++G +++ + T L+G G Sbjct: 239 VFVIAIMTSGSMI-IKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWG 297 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L G+F G + A++ +I + E Sbjct: 298 LWGVFFGIPIYAILKIIVSRVYNYYRRESE 327 >gi|58336979|ref|YP_193564.1| permease [Lactobacillus acidophilus NCFM] gi|227903538|ref|ZP_04021343.1| permease [Lactobacillus acidophilus ATCC 4796] gi|58254296|gb|AAV42533.1| putative permease [Lactobacillus acidophilus NCFM] gi|227868425|gb|EEJ75846.1| permease [Lactobacillus acidophilus ATCC 4796] Length = 395 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 110/314 (35%), Gaps = 6/314 (1%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + P+ F K ++ + V+ I + L ++ LV Sbjct: 67 YIMNPVVDWFEKKFRVPRVLTIIVLFLFVVIAMIWIINILVPIAQHQINSLVKNWPHIWN 126 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + P + Q S + + I S MI Sbjct: 127 DAVNATQNALRDPRLHSVKGSIQGMIDDTQKTLFKSGQNTVNSTLGNISSAVSIITMI-- 184 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 ++++ LFF +DG + + + + K+ + + S G + Sbjct: 185 --VMTLLTAPFILFFMLKDGHQLRPYITKFVPETWQQSFSKLLYDINYAVASYIRGQITV 242 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC 280 A G++ Y + G+P +AL ++ M +IP G P++ V + ++ Sbjct: 243 AFWVGVMFTIGYIIIGLPYGLALAILAGFMNLIPYFGTPLALIPVIVISIMTSGSMLVKV 302 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L ++ AIE I + L P ++G +++ + T L+G GL G+ G + A++ + Sbjct: 303 LIVF-AIEQTIETRILSPLVMGNKMQMHPVTTILLLIGASSVWGLWGVIFGIPIYAVLKI 361 Query: 341 IWKESIMAIKENKE 354 I + + Sbjct: 362 IVSRVYNYYRRESD 375 >gi|227832774|ref|YP_002834481.1| transporter of the putative permease family [Corynebacterium aurimucosum ATCC 700975] gi|262182735|ref|ZP_06042156.1| transporter of the putative permease family protein [Corynebacterium aurimucosum ATCC 700975] gi|227453790|gb|ACP32543.1| transporter of the putative permease family [Corynebacterium aurimucosum ATCC 700975] Length = 497 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 118/334 (35%), Gaps = 17/334 (5%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I + S L F PVL ALII PI +S + +K S A + + Sbjct: 68 TIIGIFLYASFRMLGNFWRGILPVLIALIICTVLAPI-ASAMRRKGLPSALAAAVTILVS 126 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 +F+ + + L + V Q + W P + A E+ Sbjct: 127 FTAVGALFMFIAPDFARQSQTLYLQTVEGIQR---LQLWAQGPPLNLDADEI-------- 175 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L+ + G +++ +++ FFF +DG + L Sbjct: 176 GGYIDEIALWLQRQAGSIAGSVFTGIGTAT-SIVVTLFIIVVLTFFFLKDGHNFLPWLRQ 234 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ V + +++ + + +G L GVP +AL +IT I Sbjct: 235 ATGRRTGWHLTELLTRVWSTLGGFVRAQAVVSAVDAVFIGLGLALIGVPLAMALAIITFI 294 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I A+S+ + L+ A + + + L P+L + L Sbjct: 295 AGFIPFVGAIVAGALSVTIALVSLGFTKALLVLGLVLLVQQLEGNVLSPWLQSKAMNLHP 354 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G GL+G F+ A IAV+++ Sbjct: 355 VIVLISVTVGSALFGLIGGFLAVPAAATIAVVYR 388 >gi|77164922|ref|YP_343447.1| hypothetical protein Noc_1428 [Nitrosococcus oceani ATCC 19707] gi|76883236|gb|ABA57917.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] Length = 547 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 108/312 (34%), Gaps = 10/312 (3%) Query: 5 MLNPQGIMRWMIMFII-LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I F++ L+S+Y L+ P ++ +++ + P+ K S T Sbjct: 1 MSARRQLRFWLIGFLLFLISVYLLREILLPFVAGMVVAYLIDPLCDWLERK-GCSRTAAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T + + + LL L E+ L+ + S P E W Sbjct: 60 SLVTAGFILVVSMVLLLLVPLLRSEIVHLIETLPSLIARAQD-----STWPWLQLLQERW 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +S Q+ L + S G+ + + M + F+ RD Sbjct: 115 SIDMSQIQNAAKDQAGILIKWIGKTVGTILSS-GLALANLLSLVFIMPVVAFYLLRDWDK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q+DSL ++ +++ V+ G + + G L G+ + Sbjct: 174 LIAQIDSLLPRKHAPVIREQVKLIDTVLSGFIRGQVSVCLLLGTFYAVGLALIGLDFGLM 233 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLV 301 +G++ +++ IP I I L + G + V L P LV Sbjct: 234 VGMLAGLLSFIPYVGTIVGFIAGIGLAFVQFSEWTPIFLVAGVFVIGQVVEGNVLTPRLV 293 Query: 302 GGPIKLPFLPTF 313 G + L + Sbjct: 294 GNRVGLHPVMVI 305 >gi|240103708|ref|YP_002960017.1| hypothetical protein TGAM_1651 [Thermococcus gammatolerans EJ3] gi|239911262|gb|ACS34153.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 333 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 131/356 (36%), Gaps = 28/356 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M N I + + I+ + + +P++ AL + + ++P++ + K A Sbjct: 1 MRNETLIWAIVTVVILYLVWLVVSPVVSPIILALAVAYVTYPLHEKLLPKIGRRK--AAF 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T + L + L+ + ++V M S W Sbjct: 59 LLTAIIAVLSFLFLIGFVLWINDVKYQIVRY---------------------MEISFTWL 97 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ T + I + + L I M+ + + I Sbjct: 98 QSVTVSSQRINEVLTAITEGVRSRIESYIVSYTYSIPKLALEIFVMLFVYYGALVNAEEI 157 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 ++L +L + ++ + + +++ +G +W G+ Sbjct: 158 GRELYNLLPPQRKEFGIRLIEAARYTLDTLLKSWLTLSVLKGFATALGFWAFGIAPTSGA 217 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 +ALG++TA + ++P G + + +YL+ N A ++ + + + D L P Sbjct: 218 IALGILTAFVELLPFLGGWLIWIPGVVYLIHSSNYVLAFLFAVYSIVFVSPLPDFVLAPK 277 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L L + G+ GG+ GL+G+ IGPV + L+A + +E A++ + Sbjct: 278 MTLRRRGLNALISLLGIFGGLWAFGLVGIIIGPVSLGLLATVIEEWKKAMESQPAE 333 >gi|323466958|gb|ADX70645.1| Permease [Lactobacillus helveticus H10] Length = 369 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 123/340 (36%), Gaps = 6/340 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 12 ISFVLNPAWVFFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALI 71 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 72 WIINILVPIAQNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLF 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S MI ++++ LFF +DG + + Sbjct: 132 KSGQSTINATIGNISSAVSIITMI----VMTLLTAPFILFFMLKDGHQLRPYITKFAPEH 187 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 188 WQSSFSQLLYDINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIP 247 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G P++ V + ++ + + IE I + L P ++G +++ + T Sbjct: 248 YFGTPLALIPVFVIAIMTSG-SMVIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTIL 306 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G GL G+F G + A++ +I + E Sbjct: 307 LLIGASSVWGLWGVFFGIPIYAILKIIVSRVYNYYRRESE 346 >gi|260664188|ref|ZP_05865041.1| permease [Lactobacillus jensenii SJ-7A-US] gi|260562074|gb|EEX28043.1| permease [Lactobacillus jensenii SJ-7A-US] Length = 395 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 115/310 (37%), Gaps = 6/310 (1%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + PI F K + T ++ + V+ I + L ++ L+ Sbjct: 62 YMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALIWIINSLLPIIQNQVDALIKNWPNIWD 121 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + L P + + S T + I S MIF Sbjct: 122 TSVKTIQNLLHDPHLKGVKSNINSVIDSIEKTLFKSWQDTGTAALTNISSAVSVITMIF- 180 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 ++++ LF+ +DG ++ L + + ++ + + I + G + Sbjct: 181 ---MTLLTAPFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQITV 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC 280 A+ G++ Y + G+P AL V+ A M +IP G I+ V I I + Sbjct: 238 AVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASIT-SWGMLIN 296 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + AIE I + + P +VG +K+ + T L+G GL G+ G + A++ + Sbjct: 297 VLIVFAIEQTIETRFISPIIVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIYAVVKI 356 Query: 341 IWKESIMAIK 350 + S K Sbjct: 357 VVSRSFNYFK 366 >gi|154507713|ref|ZP_02043355.1| hypothetical protein ACTODO_00194 [Actinomyces odontolyticus ATCC 17982] gi|153797347|gb|EDN79767.1| hypothetical protein ACTODO_00194 [Actinomyces odontolyticus ATCC 17982] Length = 494 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 104/329 (31%), Gaps = 9/329 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ +L + L PV AL + P+ S + S+ A + + Sbjct: 74 LVMAVLWGIARLTIVIMPVAIALTVTVLLEPLVSWMRRRLHFPSSLAATVGLLVFFAAVA 133 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIPGGMWASELWTKHLSHPQS 132 L + ++ L S+ + + +L D P M + L Sbjct: 134 GALSQAAAELIQQVPYLASQAADGFRKLLDAIAHNEFLHDGPLKMDTTVLTNAAEQLRSE 193 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + + A S + M+ LFFF ++G SI L Sbjct: 194 LVNWL-----NTNKETLATGALNITSSVGTLATSALTMLFCLFFFLKEGRSIWLWCVRLL 248 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + S +A + L + + GVP + +GVIT A Sbjct: 249 PAPARVPVHESAIRGWATFGSYVRTQIQVAAIDALGIALGAFFLGVPLAIPIGVITFFAA 308 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P GA S + + G + A + + + + L+PF++ + L + Sbjct: 309 FVPILGALTSGVIAVLVAAVNGGLTKAIIMLVIILVVQQVESNILQPFMMSNAVSLHPVA 368 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + G G+ G + A I Sbjct: 369 VMLVITAGSAIAGIAGAIFSVPIAAFINA 397 >gi|15639542|ref|NP_218992.1| hypothetical protein TP0553 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025781|ref|YP_001933553.1| hypothetical protein TPASS_0553 [Treponema pallidum subsp. pallidum SS14] gi|8928462|sp|O83564|Y553_TREPA RecName: Full=UPF0118 membrane protein TP_0553 gi|3322847|gb|AAC26557.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018356|gb|ACD70974.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] gi|291059930|gb|ADD72665.1| membrane protein [Treponema pallidum subsp. pallidum str. Chicago] gi|311359268|gb|ADP94169.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue] gi|311705159|gb|ADQ01048.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue] gi|311705167|gb|ADQ01055.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue str. Gauthier] gi|313505080|gb|ADR64248.1| conserved hypothetical membrane protein [Treponema pallidum] gi|313505088|gb|ADR64255.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pallidum str. Mexico A] gi|313505096|gb|ADR64262.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pallidum] Length = 403 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 63/370 (17%), Positives = 127/370 (34%), Gaps = 33/370 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--- 58 +++ + + + +LV + F+ + +L + I+ P Y + ++ + Sbjct: 3 KQSPAQTISLFVLLALMFVLVCMLFV-PYLTVLLWSSILAILLSPCYRALCARIDMHAFT 61 Query: 59 --------------------------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 LA + ++ + L F+ + K L Sbjct: 62 RTRHLVSHMNGEDGCTAAITRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKLL 121 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 K+ L + + +++ F + + Sbjct: 122 FDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTLNVEEHLLRFFGKHVESVFV-Y 180 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F LS +F L+FF+ DG +S L + L ++ + R Sbjct: 181 TQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALP-LRKRASAQLLEKCKEATR 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 F G+ IA + V Y + V +AL ++T + +P G + V I + Sbjct: 240 HLFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGF 299 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 T + I+D LRP L+ +++ L FF ++GGV+T G G+ +G Sbjct: 300 TSGWMRGTLFLFVAGSSITIIDSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLG 359 Query: 332 PVLMALIAVI 341 P+L+ L+ + Sbjct: 360 PILVILLFTV 369 >gi|227501979|ref|ZP_03932028.1| integral membrane protein [Corynebacterium accolens ATCC 49725] gi|227077263|gb|EEI15226.1| integral membrane protein [Corynebacterium accolens ATCC 49725] Length = 477 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 125/344 (36%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS--------ALIIGFTSWPIYSSFISKKEESST 60 + + + + FI++ + L GF + A+++ +P+ + T Sbjct: 81 RSMAKISVCFILIAAGLGLAGFLLRFIWVGLLPVILAILVSTVLYPVTAWL-RSVGFPRT 139 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV + ++ +F + + K L+++ + + + ++D P + Sbjct: 140 LAAVTTLLGLVVIFGGIFAAMAPMVTAQSKVLINEAEAGI---MQLTKMVNDSPLDIEVD 196 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L QS+ +F K I + ++ + M+ FF +D Sbjct: 197 QL--------QSVFQDIVSFAKGQAST-IATGVLSGVSMASSIAVATVIMLFITFFIIKD 247 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + +++ + K + ++A+ + + +G W VP Sbjct: 248 GDRFLPWLRKYTGNSAAWHITELTSRMWKTLSGFIQAQAVVALVDAVFIGLGLWALQVPL 307 Query: 241 HVALGVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + VIT IP ++ A++ I L+ + NA I + L+P Sbjct: 308 ALVIAVITFFAGFIPIIGAVTAGALAVIIALVSNGLTNALLALALIIIVQQVESNVLQPI 367 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + G G++G F+ + A IAV+ + Sbjct: 368 LQSRAMGLHAAIVLLSITVGSTLAGIVGAFLAVPVAATIAVVLR 411 >gi|19553991|ref|NP_601993.1| permease [Corynebacterium glutamicum ATCC 13032] gi|62391636|ref|YP_227038.1| permease [Corynebacterium glutamicum ATCC 13032] gi|41326978|emb|CAF20822.1| Predicted permease [Corynebacterium glutamicum ATCC 13032] Length = 476 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 124/354 (35%), Gaps = 18/354 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++++ I V + GF PV+ AL++ WP K + VI Sbjct: 89 ALRFIVLVIAGVIALRMLGFIWVGILPVVLALLVCTVLWPPVKWLREHKIP-AALAVVIT 147 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L + + K++V + + + + W+ P + S+ Sbjct: 148 ILGFFALIGGVFAAIAPSVSSQTKQVVDQATVGIE---DLMDWVQGPPFNLDISQFEGAL 204 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ S T I +++ M++ FFF +DG Sbjct: 205 NDLTSMLQSQSST---------IASGVFSGLSTASSIVVTLAVMLVLTFFFLKDGPRFLP 255 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ + ++++ + + +G L GVP +AL V Sbjct: 256 WMRGFTGENAGWHLTEVLTRTWNTLAGFIRAQALVSMVDAIFIGIGLLLLGVPMALALAV 315 Query: 247 ITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT IP +S A++ I L+ + NA + + I L PFL + Sbjct: 316 ITFFAGFIPIVGAVSAGALAVIIALVTNGVTNALLVLVLILAVQQIEGNILSPFLQSKAM 375 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G F+ + A +AV + + +I+S+ Sbjct: 376 NLHAAVVLLSVTVGSTMFGIIGAFLAVPVAATLAVWVRYHSEMVALRAGEITSD 429 >gi|19552249|ref|NP_600251.1| hypothetical protein NCgl0984 [Corynebacterium glutamicum ATCC 13032] Length = 490 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 119/338 (35%), Gaps = 17/338 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF---APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + + + F+ PV A+II S +K + ++ Sbjct: 64 SLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL--RKHGVPSVVSAFI 121 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ + +L+L + + +++ I + WL P + + +L Sbjct: 122 TIGTFFAVVGAILWLIAPSIAQQSQVLYFQAFEGILSIQL--WLQGPPLNLDSGDL---- 175 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L+ S G +++ +++ FFF +DG Sbjct: 176 ----SRYFNEAAAWLQNQAGAIAGEIFSGLGAAT-SVIVTLGVVLVLTFFFLKDGHRFLP 230 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +G + ++ + +++ + + +G + GVP +AL V Sbjct: 231 WTRKIGGKQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALSV 290 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT + IP + A+++ + L+ A + + + L P L + Sbjct: 291 ITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLLQSKAM 350 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IAV ++ Sbjct: 351 NLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFR 388 >gi|62389914|ref|YP_225316.1| hypothetical protein cg1166 [Corynebacterium glutamicum ATCC 13032] gi|41325250|emb|CAF19730.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032] Length = 493 Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 119/338 (35%), Gaps = 17/338 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF---APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + + + F+ PV A+II S +K + ++ Sbjct: 67 SLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL--RKHGVPSVVSAFI 124 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ + +L+L + + +++ I + WL P + + +L Sbjct: 125 TIGTFFAVVGAILWLIAPSIAQQSQVLYFQAFEGILSIQL--WLQGPPLNLDSGDL---- 178 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L+ S G +++ +++ FFF +DG Sbjct: 179 ----SRYFNEAAAWLQNQAGAIAGEIFSGLGAAT-SVIVTLGVVLVLTFFFLKDGHRFLP 233 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +G + ++ + +++ + + +G + GVP +AL V Sbjct: 234 WTRKIGGKQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALSV 293 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT + IP + A+++ + L+ A + + + L P L + Sbjct: 294 ITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLLQSKAM 353 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IAV ++ Sbjct: 354 NLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFR 391 >gi|145296788|ref|YP_001139609.1| hypothetical protein cgR_2691 [Corynebacterium glutamicum R] gi|140846708|dbj|BAF55707.1| hypothetical protein [Corynebacterium glutamicum R] Length = 476 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 123/354 (34%), Gaps = 18/354 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++++ I V + GF PV+ AL++ WP K + VI Sbjct: 89 ALRFIVLVIAGVIALRMLGFIWVGILPVVLALLVCTVLWPPVKWLREHKIP-AALAVVIT 147 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L + + K++V + + + + W+ P S+ Sbjct: 148 ILGFFALIGGVFAAIAPSVSSQTKQVVDQATVGIE---DLMDWVQGPPFNFDISQFEGAL 204 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ S T I +++ M++ FFF +DG Sbjct: 205 NDLTSMLQSQSST---------IASGVFSGLSTASSIVVTLAVMLVLTFFFLKDGPRFLP 255 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ + ++++ + + +G L GVP +AL V Sbjct: 256 WMRGFTGENAGWHLTEVLTRTWNTLAGFIRAQALVSMVDAVFIGIGLLLLGVPMALALAV 315 Query: 247 ITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT IP +S A++ I L+ + NA + + I L PFL + Sbjct: 316 ITFFAGFIPIVGAVSAGALAVIIALVTNGVANALLVLVLILAVQQIEGNILSPFLQSKAM 375 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G F+ + A +AV + + +I+S+ Sbjct: 376 NLHAAVVLLSVTVGSTMFGIIGAFLAVPVAATLAVWVRYHSEMVALRAGEITSD 429 >gi|329769779|ref|ZP_08261180.1| hypothetical protein HMPREF0433_00944 [Gemella sanguinis M325] gi|328838141|gb|EGF87759.1| hypothetical protein HMPREF0433_00944 [Gemella sanguinis M325] Length = 386 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 121/330 (36%), Gaps = 11/330 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + APV+ A + + P+ + F K +++A + + +V ++ + Sbjct: 65 IVSSIIAPVILAYVFYYILNPLVNLFSKKLP--RFASSLLAMLVGFVIILVVIIGMVPII 122 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + L+ + + SD E +L+ + + + Sbjct: 123 VEQTQTLIISIPKYIEMVRDYLDAYSDNAYMQVVIEYINNNLNTSK---------MSSEA 173 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + A ++ M LFF +D + + L SL Sbjct: 174 VTIATSVAQGVASSLSATATILMTMPFVLFFLLKDASNFKEYLVSLLPKKLKKPVVDTID 233 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G ++++ G++L Y + G+ +L I A ++++P PI Sbjct: 234 EIDNKVGSYIQGQMLVSLCIGVMLYIGYTIIGLHYGFSLATIAAFLSIVPYIGPIIAITP 293 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I F+ + P ++G + + L F ++ GV G+ Sbjct: 294 AMLVAASTSWIMVVKMLVVWGIVQFLEANIISPNIMGKSMDMHPLTVIFVILIGVNLAGV 353 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G +G + +++ V+ + AI E K Sbjct: 354 VGAILGIPVYSMLKVLGSKIQEAITERYNK 383 >gi|254433616|ref|ZP_05047124.1| conserved domain protein [Nitrosococcus oceani AFC27] gi|207089949|gb|EDZ67220.1| conserved domain protein [Nitrosococcus oceani AFC27] Length = 537 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 100/299 (33%), Gaps = 9/299 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + L+S+Y L+ P ++ +++ + P+ K S T + T + + + Sbjct: 4 FLLFLISVYLLREILLPFVAGMVVAYLIDPLCDWLERK-GCSRTAATSLVTAGFILVVSM 62 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL L E+ L+ + S P E W+ +S Q+ Sbjct: 63 VLLLLVPLLRSEIVHLIETLPSLIARAQD-----STWPWLQLLQERWSIDMSQIQNAAKD 117 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + S G+ + + M + F+ RD + Q+DSL Sbjct: 118 QAGILIKWIGKTVGTILSS-GLALANLLSLVFIMPVVAFYLLRDWDKLIAQIDSLLPRKH 176 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ +++ V+ G + + G L G+ + +G++ +++ IP Sbjct: 177 APVIREQVKLIDTVLSGFIRGQVSVCLLLGTFYAVGLALIGLDFGLMVGMLAGLLSFIPY 236 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTF 313 I I L + G + V L P LVG + L + Sbjct: 237 VGTIVGFIAGIGLAFVQFSEWTPIFLVAGVFVIGQVVEGNVLTPRLVGNRVGLHPVMVI 295 >gi|309810412|ref|ZP_07704246.1| putative membrane protein [Dermacoccus sp. Ellin185] gi|308435652|gb|EFP59450.1| putative membrane protein [Dermacoccus sp. Ellin185] Length = 494 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 129/343 (37%), Gaps = 22/343 (6%) Query: 10 GIMRWMI-MFIILVSLYFLK----GF---FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 RW + + II+V+ Y + F P++ L I WP + ++ Sbjct: 76 SFARWSLRISIIIVTFYLVWRALTPFWVIILPLILGLFITTVLWPPAAWL-RRRGVRPAL 134 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+ + + + + + + E EL K + + RWL P + A++ Sbjct: 135 AALSSVLGGLLVVGGIIAAIVPTVAAEAPELARKSMEGVSQ---IQRWLQGPPLKIPATQ 191 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + LKT+G D I ++++ +I FFF +DG Sbjct: 192 I--------DNAVNVINEKLKTSG-DAIASGVFSGVTTVGSILVTLVLSLILAFFFIKDG 242 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + A+ ++ + + I++ + + +G GVP Sbjct: 243 DRFLPWVRLVTGERTGAHVTEVFTRAWQTLSGFIRTQAIVSAIDSVCIGIGLIACGVPLA 302 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L VIT IP GA ++ + L+ + A + + + + L+P L Sbjct: 303 LPLCVITFFGGFIPIVGATVAGALAVLVALVTKGVTTAIIVLVIIILVQQLEGHILQPLL 362 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G+ G G++G F+ ++A +AV+++ Sbjct: 363 QSRSMSLHPVLVLLGIAAGSEDHGVIGGFLAVPVVATLAVLFR 405 >gi|315037883|ref|YP_004031451.1| permease [Lactobacillus amylovorus GRL 1112] gi|325956356|ref|YP_004291768.1| permease [Lactobacillus acidophilus 30SC] gi|312276016|gb|ADQ58656.1| putative permease [Lactobacillus amylovorus GRL 1112] gi|325332921|gb|ADZ06829.1| permease [Lactobacillus acidophilus 30SC] gi|327183175|gb|AEA31622.1| permease [Lactobacillus amylovorus GRL 1118] Length = 400 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 119/340 (35%), Gaps = 6/340 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ K V+ + V+ + I Sbjct: 42 ISFVLNPAWVFFSAVLPPLLLAVIQYYIMNPLVDWLERKARVPRVLTIVVLFLFVIVVLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 102 WIINILVPIVQNQINSLIKNWPHIWDDAVNATQNALSDPRLHPVRGSIKNMIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + I S M+ +++I LFF +DG + + Sbjct: 162 KSGQSAINTTLGNISSAVSIITMV----VMTLITAPFILFFMLKDGHQLRPYITKFAPEK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + K+ + + S G +A G++ Y + G+P AL ++ + +IP Sbjct: 218 WQPSFSKLLYDINYALASYIRGQITVAFWVGVMFAIGYSVVGLPYGAALAILAGFLNLIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G PI+ V + ++ L ++ IE I + L P ++G + + + T Sbjct: 278 YFGTPIALIPVIVIAIMTSGSMLVKVLVVF-VIEQTIETRVLSPLVMGNKMAMHPVTTIL 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G GL G+ G + A++ +I + E Sbjct: 337 LLIGASSVWGLWGVIFGIPIYAILKIIVSRVYNYYRRESE 376 >gi|20091671|ref|NP_617746.1| hypothetical protein MA2846 [Methanosarcina acetivorans C2A] gi|19916842|gb|AAM06226.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 405 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 136/340 (40%), Gaps = 16/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I + L +LY FF ++ + + + P+Y F + +S A+I Sbjct: 22 KVLYTVIISLVSLYTLYITSAFFYVLILSALFAYIIHPVY-FFCIRFVKSKQICALIPLG 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + M E+ ++ N R + + + Sbjct: 81 TIFLITLASGVMIVKALMNEISRILEIPNTINGFANMDLRRIVGL--------FEPLIQT 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSIS 185 HP L +L + D++P+ + I + +I +++ ++ + +I+ Sbjct: 133 HPGKLTESIGAYLNSLVTDYVPQIQNNIFQISTGLSILIIELIVIVVLTYYLLVESETIA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L +L + + ++ F+ + + G++ G YW GVP + G Sbjct: 193 TELPNLFPD--RKVGVVFLGELNYIYQNLFIVYFLTCLITGIIGGVLYWALGVPYSLIWG 250 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGG 303 ++T IMA++P GA + +++Y ++ + F A L G + L I+ D +RP Sbjct: 251 ILTFIMALLPVVGAGTVYGLLALYYVLIDDFFTAGALIFLGIVFLSIIPDFIMRPRFARN 310 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + T V +G +G+ IGP+ + ++ Sbjct: 311 RAAIHPAITLVAFAAPVFVLGPIGIIIGPLTYGFLLAAFR 350 >gi|256833416|ref|YP_003162143.1| hypothetical protein Jden_2203 [Jonesia denitrificans DSM 20603] gi|256686947|gb|ACV09840.1| protein of unknown function UPF0118 [Jonesia denitrificans DSM 20603] Length = 397 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 123/345 (35%), Gaps = 16/345 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R Q I +++ + L ++ +L F PV+ ALII +P+ ++ S+ Sbjct: 41 RLATRAVQTIAVLLVVGLTLWAMAYLGVVFIPVVLALIISSAVFPLMRWLRAR--GMSSL 98 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 LA + + LL + + V A + L D+P + Sbjct: 99 LATWLVLFSAFAVVGGLLTAIVQAVR--SQWSDLVSSAQDGFDELLVLLEDLPFEV---- 152 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 P L ++ + A + +I FFF +DG Sbjct: 153 -------DPAQLDDAKQSAIDFVTSSQFGSGAVAGLSATGTFFTGFFLTLIITFFFMKDG 205 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +I + L + + ++I + + G +A + L +G VP Sbjct: 206 PAIWEFLLRPLDGQYYDRARRIGDRSVRTMGDYIRGTATVAAVDALGIGLGLAFLQVPLA 265 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L VI + A IP GA ++ ++ L+ G I+ A + + + L+P + Sbjct: 266 LPLAVIVFLTAFIPLVGATLAGFLAALVALVDGGIWPALAVVGIVIVVNQLEGNFLQPKI 325 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +G + L L GL G G++G + + A+ I + Sbjct: 326 MGKTLSLHPLVILIGLTAGTIIGGIVGAVLSVPIAAVAWGILQVW 370 >gi|269794149|ref|YP_003313604.1| putative permease [Sanguibacter keddieii DSM 10542] gi|269096334|gb|ACZ20770.1| predicted permease [Sanguibacter keddieii DSM 10542] Length = 455 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 104/298 (34%), Gaps = 13/298 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ + + S A + V ++ + ++ + + +L K V Q + Sbjct: 102 PVAAFLRRRARFSPMLAAATSVVLLIAAITLLVVVAGRSIVSGISDLSDKAVEGFQQAL- 160 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WL++ P + L S +L+ S L A Sbjct: 161 --TWLAEGPLHIDNESLSEYLDSGLDALQENSSALLSG---------ALSVTTTVGQVLA 209 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I + FF +DG SI L L + R + S ++A + Sbjct: 210 GSIIALFCTLFFLKDGRSIWGWLVGLLPRSTRERTHQAGRRGFVTLASYARTQILVAFID 269 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLW 284 + +G + GVP + LGV+ + + IP I A+++ + + A + Sbjct: 270 SIGIGLGAAIIGVPLALPLGVLVFVGSFIPFVGAIVTGAMAVLVALVALGPVQALIMLAV 329 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I L+P+L+G + L + + G T G++G + A++ ++ Sbjct: 330 VLLVQQIEGNVLQPWLMGHAVSLHPVAVLLVVTTGTLTAGIVGALFAVPIAAVLNTVF 387 >gi|157164430|ref|YP_001467226.1| hypothetical protein CCC13826_0381 [Campylobacter concisus 13826] gi|112802037|gb|EAT99381.1| acid membrane antigen A [Campylobacter concisus 13826] Length = 346 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 130/357 (36%), Gaps = 23/357 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + +Y K F + A ++ + +F++ + T + + Sbjct: 1 MNNRLFFGIFAFCALALVVYLFKPFLLDIFIAALLAVAVANVQIAFLALTKNRKTLSSGL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T +++CLFI PLL+ + + + + +P + E K Sbjct: 61 TTFALLCLFIAPLLYAVVEIAKYAAGF--DINNVTKTIEFIKNYDFSLPESINFLEPKIK 118 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +K+L + + G + L + + +I +++ FF G + Sbjct: 119 EFIGGLDIKMLFSQ---------VAANLANLGKLSLKFGVDMIIILVFFFFCNLYGNELI 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L + I V V+ F I +G + G V G Sbjct: 170 NYLKEALP-LKKEDTESILSEVGNVMGVVFYSTIANMIIQGFLFAIITSFYGYDG-VLTG 227 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRP----- 298 + + ++IP G +++ +SIY GN A + L+ I + + D L+P Sbjct: 228 IFFSFASLIPVVGGFLAWAPISIYEFANGNTAAAITITLYTIIVISLGADTLLKPPIIKF 287 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV P K+ L FF ++ G+ T G G+ +GP ++ K + + N Sbjct: 288 INSKLVKIPTKINELLIFFAMIAGISTFGFWGVILGPAIVTFFISTIKLYTLLRERN 344 >gi|88799319|ref|ZP_01114897.1| permease, putative [Reinekea sp. MED297] gi|88777858|gb|EAR09055.1| permease, putative [Reinekea sp. MED297] Length = 391 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 131/340 (38%), Gaps = 18/340 (5%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+++ +++ + L +P L+AL++ + P+ K T Sbjct: 8 KWLVLASLVLLFWLITLLSPILSPFLTALLLAYLGDPLVDKLEEWKLSR--------TQG 59 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ F+V L +L + L+ ++ + W+ + E + Sbjct: 60 VVVTFLVLALIFALAALLVIPALIQQIDDLIKLVPQGVAWIKN--EATPYLEQRFDIDLY 117 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 LS + + + G+ + + +++ + + F+ RD + + Sbjct: 118 EFDWAWLSAKLDWGATGNVVRSVLANLTQSGLAMVSFIGNLVLIPVVTFYLLRDWDLLVE 177 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ +L + A +++ + + + F G ++ + +G++ G+ + +G+ Sbjct: 178 RVGALIPRYYIANVSSLAQQCHETLGAFFRGQLLVMLAQGIIYSIGLMAIGLDLGLLVGM 237 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + +++P I ++ G++ + + + + + L P LVG Sbjct: 238 LAGLASIVPYLGAIIGIGAGLFAAWFQFGDLLHLVLVLVVFGVGQTLEGTVLTPKLVGDR 297 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L + F ++ G + G +G+ + A+I V+ ++ Sbjct: 298 IGLHPVAVIFAVLAGGQLFGFVGILLALPAAAVIMVLLRQ 337 >gi|302670428|ref|YP_003830388.1| hypothetical protein bpr_I1065 [Butyrivibrio proteoclasticus B316] gi|302394901|gb|ADL33806.1| hypothetical protein bpr_I1065 [Butyrivibrio proteoclasticus B316] Length = 382 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 124/334 (37%), Gaps = 6/334 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L G+ PV+S +I+ + P+ F +K ++ + ++ + + ++ ++ LF Sbjct: 42 LYGYIKPVVSGMIVAYIFNPLSKVFNDKVFRKMKNESAKWKLSVCCTIIVIVLAVVLLFV 101 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK- 142 + ++ + +S V + + + + L++ L S + Sbjct: 102 ALIPQLADSISTFVSNVDGYVATTQGVLRDLEKNDTTGLFSGELGALASFTDKILDKIGE 161 Query: 143 --TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +N + + ++ G D ++ I I L R ++ + + Sbjct: 162 YFSNNVGNVVTTSASIGKSVFDAVIAFILAIYLLLDKTRLKNGFARFTRLIMKPENHENV 221 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +I + I G V +AG+P V + VI + + P PI Sbjct: 222 AIFLDRCNSIIIRYISFDIVEGIIVGAVNLIFMLIAGMPYSVLISVIVGVTNLAPTFGPI 281 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++L+ N + A + + I L+P L G + + L +V G Sbjct: 282 VGCVIGAFILVLVNPWYAVAFIAFTIVLQTIDGYILKPRLFGESLGVSPLMILIAIVVGG 341 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 R G++G+ + A+I +W++ ++ E + Sbjct: 342 RLFGVVGILLAIPFAAIIDFVWRDYVLKKLEERH 375 >gi|116491173|ref|YP_810717.1| permease [Oenococcus oeni PSU-1] gi|290890689|ref|ZP_06553759.1| hypothetical protein AWRIB429_1149 [Oenococcus oeni AWRIB429] gi|116091898|gb|ABJ57052.1| Predicted permease [Oenococcus oeni PSU-1] gi|290479664|gb|EFD88318.1| hypothetical protein AWRIB429_1149 [Oenococcus oeni AWRIB429] Length = 382 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 116/324 (35%), Gaps = 6/324 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 APV++A I + P + K S + +I + V ++ ++++ Sbjct: 60 APVITAGIFYYLLIPSVNWAHDKFHLSKQLIVLIIFLFVALFLVLFVVYIAPIIRDNFIV 119 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 H + PG ++ I TNGI + + Sbjct: 120 FFKHWPDYYSHWSKRLQVWLSYPGLKPIKNWVLDTNNNFNKTIINWSKNYLTNGIAGVGK 179 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 MI +++I L++ +DG + + + ++ + K I Sbjct: 180 ITRVITMI----VITLITFPFILYYMLKDGDQLPRYISQFFPARTRPSLLEVLHEINKQI 235 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 G + A+ ++ + + G+P + +G++ + +IP G+ + I L Sbjct: 236 SDYLRGQILTAVAVSIMFMIGFSIIGLPYGIWIGLLAGPLNLIPYLGSFLVMVPAIIIAL 295 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G I + + IE + + + P ++G + + + L+G GLLG+ Sbjct: 296 F-GGIHLVIAVLIVFVIEQTLESRLIHPKIMGASMNIHPITVLVILLGAGEMFGLLGVAF 354 Query: 331 GPVLMALIAVIWKESIMAIKENKE 354 G A++ V+ S +EN E Sbjct: 355 GIPTYAVLKVLIGRSYHWWRENSE 378 >gi|298674448|ref|YP_003726198.1| hypothetical protein Metev_0489 [Methanohalobium evestigatum Z-7303] gi|298287436|gb|ADI73402.1| protein of unknown function UPF0118 [Methanohalobium evestigatum Z-7303] Length = 361 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 131/353 (37%), Gaps = 19/353 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ L+ ++ L+ + S PIY ++ A++AT+ Sbjct: 18 KIIAAIAVALFFLAIIFILRPLADGIILGLVFAYISRPIYLKL----NKNKRVGALVATI 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ I L + ++ +V I L T Sbjct: 74 CIVIPIIFILGMGILEIIQQITWIVQNQNEVISSLTGF------INNVEIPDFLHTGIEQ 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q + L+ GI + + + L+++ II +F DG ++ Q++ Sbjct: 128 SIQDISQSIIPILREIGI-------VSYAKDLVIFLLNLVISIIVCYFLLSDGNTLYQKV 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ + K++ F+G A+ ++ +++ G +AL + Sbjct: 181 LDITPSNYQKTFQNYVTELDKILGGIFIGNAYAALFVSIMSAIVFYVFGFSHILALSALI 240 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIK 306 I A++P A + +++ I A FL +I +++ + +RP+L K Sbjct: 241 FIAAVVPLFAGYMVLLPLALLRYFNQGIEAALIFFLVASIVIYLPPELFMRPYLASLKSK 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L +GG G+ G F P+L+ + ++ + ++ + N Sbjct: 301 VHPLLIMLAFIGGAFVGGIAGFFAAPILLGALIAAYRVYVSELRSYGYNLGQN 353 >gi|315606054|ref|ZP_07881085.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312336|gb|EFU60422.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 495 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 98/311 (31%), Gaps = 3/311 (0%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV AL + P+ S K + A + + + L + ++ Sbjct: 89 IMPVAIALTVAVLLEPLVSWMRRKLHFPPSLAAAVGLLVFFAVITGALSQAAAELIQQVP 148 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L ++ + + + G + T L+H + + Sbjct: 149 QLATQAADGFRALLDTITHNEFLKNGPLKID--TTVLNHWVDQLRSELVGWLNTNKEALA 206 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A S + M+ LFFF ++G SI L + S Sbjct: 207 TGALNITSSVGTLATSGLTMLFCLFFFLKEGRSIWLWCVRLLPARARVPVYESSIRGWAT 266 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 S +A + + + + GVP + +GVIT A +P GA S + Sbjct: 267 FGSYVRTQIQVAAIDAIGIALGAFFLGVPLAIPIGVITFFAAFVPILGALTSGVIAVLVA 326 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + G + A + + + + L+PF++ + L + + G G+ G Sbjct: 327 AVNGGLTKAIIMLVIILVVQQVESNILQPFMMSNAVSLHPVAVMLVITAGSAIAGIAGAV 386 Query: 330 IGPVLMALIAV 340 + A I Sbjct: 387 FSVPIAAFINA 397 >gi|222874438|gb|EEF11569.1| predicted protein [Populus trichocarpa] Length = 143 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%) Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P GA + + V+IY L G + L +G + + +VD LRP LVG K Sbjct: 1 MAFLSLLPAVGAGLIWAPVAIYFLATGAVGKGVILIAYGVLVIGLVDNVLRPLLVGKDTK 60 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P +GG+ GL G IGPV+ AL IW +++EK Sbjct: 61 MPDYIVLISTLGGMALFGLTGFVIGPVIAALFMAIWDMFSRMQVQDEEK 109 >gi|317495386|ref|ZP_07953755.1| hypothetical protein HMPREF0432_00357 [Gemella moribillum M424] gi|316914445|gb|EFV35922.1| hypothetical protein HMPREF0432_00357 [Gemella moribillum M424] Length = 381 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 127/330 (38%), Gaps = 11/330 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P++ A I + P+ + F K +++A V + + +V ++ + Sbjct: 60 IVSSIMTPIIVAYIFYYILNPLVNFFSKKMP--RFLASLLAIVVGVIVILVVIIGMVPIV 117 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + K L++ + + SD E +L+ Q L + Sbjct: 118 VEQTKNLITSLPRYIEIVKGYLDTYSDNAYVQVVIEYINNNLNISQ---------LSSKA 168 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ A +I M LFF +D + ++ S+ + Sbjct: 169 VEVATLVAQNIASSLSSTASVLITMPFVLFFLLKDATTFNKYFISILPKKLEKPVAETIE 228 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G ++++ G++L Y + G+ +L I A ++++P P+ Sbjct: 229 EIDDKVGSYIQGQMLVSLCIGVMLFIGYNIIGLHYAFSLATIAAFLSIVPYLGPVIAITP 288 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I F+ + P ++G +K+ L F ++ GV G+ Sbjct: 289 AMLVAASTSWVMVIKMLVVWGIVQFLEGNIISPNIMGRSMKMHPLTVIFVILIGVNMAGV 348 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G +G + +++ V+ + + ++K +K Sbjct: 349 VGAILGIPVYSILKVLIVKLLTSLKNRYDK 378 >gi|25027637|ref|NP_737691.1| hypothetical protein CE1081 [Corynebacterium efficiens YS-314] gi|23492919|dbj|BAC17891.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 488 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 114/338 (33%), Gaps = 20/338 (5%) Query: 12 MRWMIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R + + + + + +G +L+ ++ S P + ++ K + AV Sbjct: 60 LRILFIAVAAYVGWLILGQLWRGVLPVILALIVCTVLSTP--NMWLRKLKFPPALAAVTT 117 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L +V + V WL P + A+++ Sbjct: 118 IIIFFAAIAGVFWLIAPSIARQSQTLYYQVFDGI---LSVQLWLQGDPFNLDANDV---- 170 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L+ S GM +++ +++ FFF +DG Sbjct: 171 ----DNFFNEVVGWLQNQAGTIAGEIFSGLGMAT-SVIITLGVVLVLTFFFLKDGDRFLS 225 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + I++ + + +G + GVP AL V Sbjct: 226 WGRQAVGETSGWHLTELLTRAWNTLAGFIRAQAIVSAVDAVFIGIGLVIVGVPMAFALSV 285 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT + IP GA + I L+ A + + + L P L + Sbjct: 286 ITFVAGFIPIVGAFTAGALAVIVALVSLGFTEAVIVLIIVVAVQQLEGNILSPILQSKAM 345 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IAV ++ Sbjct: 346 NLHPVIVLLSVTVGGTLFGIIGAFLAVPVAAMIAVAFR 383 >gi|284990630|ref|YP_003409184.1| hypothetical protein Gobs_2128 [Geodermatophilus obscurus DSM 43160] gi|284063875|gb|ADB74813.1| protein of unknown function UPF0118 [Geodermatophilus obscurus DSM 43160] Length = 444 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 113/334 (33%), Gaps = 14/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L PV+ L+ WP + + + A++ + + ++ Sbjct: 79 LWPILLPVILGLLFATVLWPP-TRLLRRLHFPPALAALVVLLGFFAVVAGLFSWIVPQVA 137 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + EL Q V W++ P + ++ S++ ++ Sbjct: 138 DQTGELADAATAGLQ---DVQEWVTGPPLNLGEDQIGQAVDQVIDSIQGNAQN------- 187 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I +A L+++ ++ FFF +DG L + + +S Sbjct: 188 --IAGYALTGVSALGSGLLNLVLALVLAFFFIKDGPRWLPWLAAQTGPKVAPHVAALSYK 245 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++ + +G W+ VP + L V+T A IP A + Sbjct: 246 TWSTLSEFIRQQALVGFVDAFFIGLGLWILDVPLVLPLAVLTFFGAFIPIIGAFVAGAFA 305 Query: 267 I-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ A + + + + L+P L G + L + G G+ Sbjct: 306 VLIALVSNGWQTALIVLVIVLVVQQLEGNVLQPILQGRGLNLHAAVVILAVTAGGSLYGI 365 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG F+G + ALIAV+++ + +++ + Sbjct: 366 LGTFLGVPVAALIAVVYRYVRDELDGRTPEVADD 399 >gi|116753687|ref|YP_842805.1| hypothetical protein Mthe_0372 [Methanosaeta thermophila PT] gi|116665138|gb|ABK14165.1| protein of unknown function UPF0118 [Methanosaeta thermophila PT] Length = 339 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 126/349 (36%), Gaps = 15/349 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R ++ ++L++ + F P++ +I+G I + IAT+ Sbjct: 3 IKRNWMIAVVLIAFIAIAYFMFPLVDGIILGTVFAYIGRPIRDMFGPRKRLGSAIATIG- 61 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 IVP+ + G++E+ + A G S I G E++T Sbjct: 62 ---IIVPISLVLILGVMEIANFFMWI--AQNPGSMAREMSSTISGLEIPDEIYTLITGSL 116 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 QS+ + +G + ++II I +F DG + Sbjct: 117 QSILSFVADVAARMPL-------LDYGRRVVLLAVNIIVAIPVCYFLLCDGERFVDSWFT 169 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ + +++ FLG AI ++ ++ VP A+ + I Sbjct: 170 IVPEESLDTYRAYFNRIDRILSGIFLGSMYTAIVGSVISAIVFYAFDVPRPFAMASLVFI 229 Query: 251 MAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIKLP 308 ++P A VSIY I A F + +++ + +RP+LV + Sbjct: 230 AGLVPALTAWAVIVPVSIYRYIHMGPAEALMFFAVASALIYLPSELIVRPYLVAARSSIH 289 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L +GG G+ G F+ P +M +I I++ KE + Sbjct: 290 PLLVMLSFLGGAMVAGIGGFFLAPAVMGVIVGIYQVRREQSLAAKETQN 338 >gi|152993672|ref|YP_001359393.1| hypothetical protein SUN_2095 [Sulfurovum sp. NBC37-1] gi|151425533|dbj|BAF73036.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 347 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 139/357 (38%), Gaps = 28/357 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N ++ + +F ++ + + F P+ A+++ ++ + I K +S A IA Sbjct: 4 NKSLMITALFVFTVIGAYSIYQPFLLPLSVAILLTMATYNLTKKMI-KFFKSRKLSAGIA 62 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ ++ + P++++ G+ M +L + V + + W Sbjct: 63 TLLLVLIIFAPIVYMATTGVGYMTQL------DVEKIKHVTEVFKTFGEEIPFVKGWVHT 116 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +++ + + + G + + + ++I +++ F G + Sbjct: 117 ALSDKAIAGYVQDA---------TSYLTTAGSVGIGFVKNMILVLVFYFLINYYGERFFE 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + +L + K+ V + F + I AI EG + G G + + G+ Sbjct: 168 LIRALLP-INKMKSAKMIHEVSSTMEVVFYSIIITAIFEGFLFGIMVSYFGF-NGLLFGM 225 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF----- 299 I ++IP G + + VS+Y + A + + + + I+ D ++P Sbjct: 226 IYGFASLIPLIGGAVVWVPVSLYAWTTIDANTAIFIASYSVVVISIIADTFIKPVIIKVI 285 Query: 300 ---LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ I++ + FF ++ G+ T G G+ +GP + + + I + I + + Sbjct: 286 KEDLLKSNIEVNEIVIFFSILAGMSTYGFWGMILGPAITSFLIAITRIYIEYNSKEQ 342 >gi|227504066|ref|ZP_03934115.1| membrane protein [Corynebacterium striatum ATCC 6940] gi|227199332|gb|EEI79380.1| membrane protein [Corynebacterium striatum ATCC 6940] Length = 499 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 102/294 (34%), Gaps = 13/294 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + S+ AV+ + LF+ + + + L + Q + W+ Sbjct: 100 WLRRHHVPSSLAAVLTILVSFSGLGALFLFIAPNFVRQSQTLYLQTANGIQ---ALRLWV 156 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + E+ T + + + G ++++ + Sbjct: 157 QQPPLNLNEDEIGTYID--------EIALWAQKQAGSIAGSVFNGIGQAT-SMIVTLMVV 207 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ FFF +DG L + ++ + ++++ + + +G Sbjct: 208 LVLTFFFLKDGHHFLPWLREATGRRTGWHLTELLTRGWNTLGGFVRAQALVSLVDAVFIG 267 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIEL 289 + GVP + L +IT I IP I A+S+ + L+ + A + L + Sbjct: 268 IGLAIIGVPLALTLAIITFIAGFIPFVGAIVAGALSVTIALVSLGVTKALLVLLLVLVVQ 327 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L P+L + L + + G L+G F+ A+ AV ++ Sbjct: 328 QLEGNVLSPWLQSKAMNLHPVVVLTSVTVGSALFNLVGAFLAVPAAAMFAVAYR 381 >gi|312137386|ref|YP_004004723.1| hypothetical protein Mfer_1175 [Methanothermus fervidus DSM 2088] gi|311225105|gb|ADP77961.1| protein of unknown function UPF0118 [Methanothermus fervidus DSM 2088] Length = 325 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 134/333 (40%), Gaps = 27/333 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + ++++S L F ++ + + + + ISKK E ++ M Sbjct: 14 FLTIILVILSFIVLYPLFTTLILSAVFAYGTN-----LISKKFEKKVKYKSLSITIGMIT 68 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P+LF+ + + L+ +P + + + P + Sbjct: 69 IVLPILFVLLFLFYSL--------------------LNALPSLIKVVNVHSIMKYIPFKV 108 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T L ++F+ + + ++ I++ F+ RDG + Q + S+ Sbjct: 109 PTDIITDLTHRVVEFVFVYLLELVRSLPTLSIHLLVFIMSTFYLARDGTKLIQYIRSILP 168 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + K+ R + IR+ F G + A+ G+ AY++ G P LGVIT + Sbjct: 169 KNKVKLFNKMLREIEVTIRAIFYGHFLAALIVGIFATMAYYILGYPFPAILGVITMFTTV 228 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + ++ IY +I GN+ + ++G L +D LR L G ++ + Sbjct: 229 IPVIGPWPVYLSLGIYDIIHGNVIRGVAIIVFGK-SLGFLDVYLRTELGGKYAEIHPMLF 287 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G +GG G+ G +GP+++ I K Sbjct: 288 LVGFIGGPMIWGIAGFILGPLILCTTHTIIKTY 320 >gi|118587353|ref|ZP_01544779.1| transport protein [Oenococcus oeni ATCC BAA-1163] gi|118432177|gb|EAV38917.1| transport protein [Oenococcus oeni ATCC BAA-1163] Length = 382 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 4/323 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 APV++A I + P + K S + +I + V ++ ++++ Sbjct: 60 APVITAGIFYYLLIPSVNWAHDKFHLSKQLIVLIIFLFVALFLVLFVVYIAPIIRDNFIV 119 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 H + PG ++ I TNGI + + Sbjct: 120 FFKHWPDYYSHWSKRLQVWLSYPGLKPIKNWVLDTNNNFNKTIINWSKNYLTNGIAGVGK 179 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 MI +++I L++ +DG + + + ++ + K I Sbjct: 180 ITRVITMI----VITLITFPFILYYMLKDGDQLPRYISQFFPARTRPSLLEVLHEINKQI 235 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 G + A+ ++ + + G+P + +G++ + +IP +I + + Sbjct: 236 SDYLRGQILTAVAVSIMFMIGFSIIGLPYGIWIGLLAGPLNLIPYLGSFLAMVPAIIIAL 295 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G I + + IE + + + P ++G + + + L+G GLLG+ G Sbjct: 296 FGGIHLVIAVLIVFVIEQTLESRLIHPKIMGASMNIHPITVLVILLGAGEMFGLLGVAFG 355 Query: 332 PVLMALIAVIWKESIMAIKENKE 354 A++ V+ S +EN E Sbjct: 356 IPAYAVLKVLIGRSYHWWRENSE 378 >gi|295397084|ref|ZP_06807196.1| membrane protein [Aerococcus viridans ATCC 11563] gi|294974676|gb|EFG50391.1| membrane protein [Aerococcus viridans ATCC 11563] Length = 425 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 127/327 (38%), Gaps = 8/327 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F++ P++ A I + + P+ + K + A++ + ++ + + L+ L Sbjct: 83 FIQYVSLPIIVAAIFYYLTVPLVNRIEKKGLNRTWGSAIV--LLLIAVVVTGLIALIPTV 140 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E + L++ + L G W ++ S ++ LS ++ Sbjct: 141 ADEGRNLINN---WDTIWSDYQSRLQSFIRGDWYDQVNMVFQSAMNNVLDLSSFNWESIA 197 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I +S G + ++I I LF+ RDG + + ++ Sbjct: 198 NSAITSVSSIVGTVT-KVAVAIFTAPIILFYMLRDGHKLPTYVAQFLPIKIRKATLRLLS 256 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + I G I+AIG ++ Y + G+P V +GV + +IP G+ ++ Sbjct: 257 DMNLQISQYIRGQIIVAIGVAIMFVVGYSIVGLPYGVIIGVAAGFLNIIPYIGSFLAMVP 316 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I ++ G + L ++ AIE I + + P ++G + + + L+ G Sbjct: 317 AIIVAIVVGPMMIVKVLIVF-AIEQTIESRVISPQVLGSNMAIHPVTIMLLLISAGSIFG 375 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ + + A+I VI+ + K Sbjct: 376 IAGVVLVIPIYAVIKVIFNHFFVWYKN 402 >gi|14590842|ref|NP_142914.1| hypothetical protein PH1000 [Pyrococcus horikoshii OT3] gi|8928493|sp|O58728|YA00_PYRHO RecName: Full=UPF0118 membrane protein PH1000 gi|3257414|dbj|BAA30097.1| 355aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 355 Score = 106 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 143/347 (41%), Gaps = 33/347 (9%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + +I+ ++ +++ + FF+P+ A I + +P++ + ++ A Sbjct: 27 FMEVSRVVTWIIIITLVALAIKTILPFFSPLFFAFITAYALYPLHIKLKERIGSKNS--A 84 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ T+ ++ ++ LL L Y + + + + I +P + Sbjct: 85 ILLTLFLLLGALMILLILVYTLTPVIGQAYDYLTNLEKIKINIPLVPKSV---------- 134 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 SL+ + + F++ + Y L +I + ++FF Sbjct: 135 ------ISSLEGVIDEFIERGKGYLV-----SLTFSVPKYLLQVIVYLTFVYFFLVKEKE 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PS 240 + + E L +I +++ ++ I +G+++ + + V P+ Sbjct: 184 ARELITFEDEKLI-----RIIERGNLTLQALIRVWLLLNIVKGILMTLGFLIFKVSNLPT 238 Query: 241 HVALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP 298 + G++T + + IP + + A + YL+ +G+I L ++G + + D T+RP Sbjct: 239 AILAGLLTVLFSFIPLFEGWMIWLAGAFYLVKQGHIIAGIGLAVYGFTLVSPLPDFTIRP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV + + G++GG +GL GL IGP+++ + + +E Sbjct: 299 KLVAREAEFNDVLVLIGMIGGTWGLGLKGLIIGPIVLNVAIEMLREW 345 >gi|20091716|ref|NP_617791.1| hypothetical protein MA2895 [Methanosarcina acetivorans C2A] gi|19916893|gb|AAM06271.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 372 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 125/322 (38%), Gaps = 15/322 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+ +++G I K + A+IA++ +P++F+ G++E+ Sbjct: 39 PLADGIVLGIVFAYIARPIQVKFGKYRKIGALIASL----FIFIPIVFIVGAGVVEILNQ 94 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +S + ++ V + D G+ + + +++ ++ L + L G + + Sbjct: 95 ISWI---FENQTSVMSGILDFIHGLEIPSTYVERINN--AIWNLFTSLLPAVGSVGLISY 149 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A G+ + ++ I I +F DG + + + + + + +++ Sbjct: 150 AQSIGL----FVINFIVSIFFCYFLLADGDRLYCAFIGMIPSDYQNIVNRYASHLDLILK 205 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLI 271 F+G A+ + + G +AL + I ++IP A + ++++ Sbjct: 206 GVFIGNAYSALIVSVTSVFVFRAFGFSHVLALATLVFIASVIPLFAGYMVLVPMALFRYF 265 Query: 272 KGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + +A F+ ++ + + LRPFL K+ + +GG G+ G F Sbjct: 266 EQGFQSAALFFVVSSLVIYGPPELILRPFLTSLKSKIHPMLLMLAFLGGAFVGGIAGFFA 325 Query: 331 GPVLMALIAVIWKESIMAIKEN 352 P+L+ + ++ I Sbjct: 326 APILLGALVAAYRVYQEQIHPE 347 >gi|84497791|ref|ZP_00996588.1| integral membrane protein [Janibacter sp. HTCC2649] gi|84381291|gb|EAP97174.1| integral membrane protein [Janibacter sp. HTCC2649] Length = 404 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 111/332 (33%), Gaps = 19/332 (5%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I +L +L+ F P++ A+++ PI A + + Sbjct: 63 IIIAAAVLGALWLFAYFSEVTVPIIIAMLLTALLMPITRFLARVIP--RGAAAGLTVLGT 120 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + I L F+ + ++ ++V W + S Sbjct: 121 LAVIIGALSFVGSQFSSQFSDISTQVGQGIDE------------IRSWFRTSFGLTDSQV 168 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + G + A++ G+ + ALFFF DG I + Sbjct: 169 DGWIDKAREQLSSGGGS-LGETAAQAGLTVTHLVAGFFISMFALFFFLYDGERIWAWVVR 227 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L I + + ++A + L +G L GVP + V+ Sbjct: 228 LFPRTSRDRVHSSGVIAWGQLSAFTRATILVAAVDALGIGIVAGLLGVPFASGVAVLVFF 287 Query: 251 MAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP AV + L + A + + L+PFL+G +++ Sbjct: 288 GAFIPVIGAAISGAVPVLLALVALGPVQALIMLGGVIAVQQLESHVLQPFLLGRAVRVHP 347 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G+ GGV G+LG I L+A++ + Sbjct: 348 LAVILGIAGGVVAAGILGALIAVPLVAVLNAV 379 >gi|119962201|ref|YP_947065.1| permease [Arthrobacter aurescens TC1] gi|119949060|gb|ABM07971.1| putative permease [Arthrobacter aurescens TC1] Length = 426 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 116/333 (34%), Gaps = 17/333 (5%) Query: 15 MIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ +I ++ L PV+ A ++ P+ + ++K + I + + Sbjct: 35 LILLMIGAMVWLLGKVSFLIIPVMVAALLAGLLHPVVAWLRNRKVPN-GGAVAITVLGFI 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + L + + Q + WL+D P + A ++ Sbjct: 94 GVIGGALALVGRQLVTGFGALWQEALAGIQ---QIQTWLADGPLHLTADQIDQYISDGAN 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L+ S + L A FG + ++ + L FF +G I L L Sbjct: 151 ALQNNSSSILSG---------ALSFGSTAGHFAAGLVLALFILIFFLLEGPRIWAFLVRL 201 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 R + S +A + + +G + VP + L V+ I Sbjct: 202 LPKSARRATDGAGRRGWTSMVSYVRIQMFVAFVDAVGIGVGAAIIQVPLALPLAVLVFIG 261 Query: 252 AMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + A+++ L L+ NA + + + L+P ++G + L + Sbjct: 262 SFIPVVGALVTGAIAVLLALVANGPINALIMLAIVLVVQQLESHILQPLVMGKAVALHPV 321 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G+ G L+A++ + Sbjct: 322 AVILSVAAGSYLAGIPGALFAVPLLAVVNTAVR 354 >gi|223043206|ref|ZP_03613253.1| membrane protein YubA [Staphylococcus capitis SK14] gi|222443417|gb|EEE49515.1| membrane protein YubA [Staphylococcus capitis SK14] Length = 404 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 134/353 (37%), Gaps = 14/353 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +LI+ + P+ + + Sbjct: 39 VLLGIVIFIFDKVSYVFEPFIIIFNTIAAPIIVSLILFYLFNPLVNLMERYRIPR----- 93 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASEL 122 ++ + + + + + + + ++ + H + + + + I + S Sbjct: 94 LLGITIIYVAVVGIITLIVNLLIPIIGSQIEGLIKNSPHYLNKITQSIEKITTNSFLSSY 153 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ +S + + L F P+ AS F + + I+ LFF +DG Sbjct: 154 MSQVNDWLESAQKKIPSMLSEYFDGFGPKLAS-FAEAVSNVGVVIVTTPFILFFMLKDGH 212 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + F + + + + S G I++ G++L Y + G+ + Sbjct: 213 RFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLLIGYSIIGLKYPL 272 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L I A+ +++P P + +I + I + + L + + F + P ++G Sbjct: 273 VLASIAAVTSVVPYLGPTIAISPAIVIAIITSPWMLLKLVIVWTLVQFFEGHFISPNVMG 332 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ L F L+ M ++G+ IG L A++ V+ + K + Sbjct: 333 KTLKIHPLTIIFILLCAGNLMNVVGVIIGIPLYAVLKVLVSHIFLLFKRRYNR 385 >gi|227877174|ref|ZP_03995248.1| permease [Lactobacillus crispatus JV-V01] gi|256842728|ref|ZP_05548216.1| permease [Lactobacillus crispatus 125-2-CHN] gi|256848962|ref|ZP_05554396.1| permease [Lactobacillus crispatus MV-1A-US] gi|262045695|ref|ZP_06018659.1| permease [Lactobacillus crispatus MV-3A-US] gi|293380173|ref|ZP_06626255.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|295692527|ref|YP_003601137.1| permease [Lactobacillus crispatus ST1] gi|312977748|ref|ZP_07789495.1| putative membrane protein [Lactobacillus crispatus CTV-05] gi|227863228|gb|EEJ70673.1| permease [Lactobacillus crispatus JV-V01] gi|256614148|gb|EEU19349.1| permease [Lactobacillus crispatus 125-2-CHN] gi|256714501|gb|EEU29488.1| permease [Lactobacillus crispatus MV-1A-US] gi|260573654|gb|EEX30210.1| permease [Lactobacillus crispatus MV-3A-US] gi|290923217|gb|EFE00138.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|295030633|emb|CBL50112.1| Permease [Lactobacillus crispatus ST1] gi|310895487|gb|EFQ44554.1| putative membrane protein [Lactobacillus crispatus CTV-05] Length = 395 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 122/343 (35%), Gaps = 6/343 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F++ + F P+L A+I + P+ K + ++ + V+ I Sbjct: 43 FVLNPAWIFFSAILPPLLLAVIQYYIMNPVVDWCERKFKIPRVVTIIVLFLLVVVALIWI 102 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L ++ L+ + + P + + Q S Sbjct: 103 INILVPIAQNQINSLIKNWPHIWNDAVNATQNALQDPRLHSFKGSIKGMIDNTQKTLFKS 162 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 I I S M+ ++++ LFF +DG + + + Sbjct: 163 GQSTINATIGNISSAVSIITMV----AMTLLTAPFILFFMLKDGHQLRPYITKFAPEKWQ 218 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 + K+ + + S G +A G++ Y L G+P VAL ++ M +IP Sbjct: 219 PSFSKLLYDINYAVASYVRGQITVAFWVGVMFSLGYILIGLPYGVALAILAGFMNLIPYF 278 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G P++ V + ++ + + AIE I + L P+++G +++ + T L Sbjct: 279 GTPLAMIPVIVISIMTSGSML-IKVLIVFAIEQTIESRILSPWVMGNKMEMHPITTILLL 337 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G GL G+ G + A++ +I + + N Sbjct: 338 IGASAVWGLWGVVFGIPIYAILKIIVSRVYNYYRRESKLFEEN 380 >gi|258650755|ref|YP_003199911.1| hypothetical protein Namu_0503 [Nakamurella multipartita DSM 44233] gi|258553980|gb|ACV76922.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 416 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 115/329 (34%), Gaps = 29/329 (8%) Query: 9 QGIMRWMIMFI-ILVSLYFLKGFFAPVLSALII--------GFTSWPIYSSFISKKEESS 59 Q +R +I+ + + + + L L ++++ WP K Sbjct: 58 QWTLRLLIIGVGLFAAFWILGQ-----LWSVVLPILLGLLLATILWPPVRFMRRKLPN-- 110 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A++A + ++ +F + L + ELV + + WL+ P + Sbjct: 111 ALAAIVALIGLLVIFSGLIAVLAPQVTSQAGELVDRATAGLTT---LQSWLAGPPFNLGP 167 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L ++ S+ L ++++ ++ FFF + Sbjct: 168 DALGGLLDKGISEIQSNSQEVLGVVLGSL---------SAIGSAVITLVLALVLCFFFLK 218 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG L + ++ ++S V + +A +G+ +G WL GVP Sbjct: 219 DGPKFVPWLRTWIGRAAGTHFAELSDRVWTALGQYVWSQAAVAAVDGVFIGVGVWLLGVP 278 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + V+T +P +V++ + L+ I+ A + + + ++P Sbjct: 279 FALPIAVLTFFGGFVPIVGAFVAGSVAVLVALVSNGIWTAVGVLAIVLVVQQLEGNVMQP 338 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LVG + + T + G G++G Sbjct: 339 ILVGKTMNIHAAVTIAVVALGGTLFGIVG 367 >gi|21325574|dbj|BAC00195.1| Predicted permease [Corynebacterium glutamicum ATCC 13032] Length = 444 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 124/354 (35%), Gaps = 18/354 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++++ I V + GF PV+ AL++ WP K + VI Sbjct: 57 ALRFIVLVIAGVIALRMLGFIWVGILPVVLALLVCTVLWPPVKWLREHKIP-AALAVVIT 115 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L + + K++V + + + + W+ P + S+ Sbjct: 116 ILGFFALIGGVFAAIAPSVSSQTKQVVDQATVGIE---DLMDWVQGPPFNLDISQFEGAL 172 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ S T I +++ M++ FFF +DG Sbjct: 173 NDLTSMLQSQSST---------IASGVFSGLSTASSIVVTLAVMLVLTFFFLKDGPRFLP 223 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ + ++++ + + +G L GVP +AL V Sbjct: 224 WMRGFTGENAGWHLTEVLTRTWNTLAGFIRAQALVSMVDAIFIGIGLLLLGVPMALALAV 283 Query: 247 ITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT IP +S A++ I L+ + NA + + I L PFL + Sbjct: 284 ITFFAGFIPIVGAVSAGALAVIIALVTNGVTNALLVLVLILAVQQIEGNILSPFLQSKAM 343 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G F+ + A +AV + + +I+S+ Sbjct: 344 NLHAAVVLLSVTVGSTMFGIIGAFLAVPVAATLAVWVRYHSEMVALRAGEITSD 397 >gi|154173718|ref|YP_001408692.1| acid membrane antigen A [Campylobacter curvus 525.92] gi|112802392|gb|EAT99736.1| acid membrane antigen A [Campylobacter curvus 525.92] Length = 348 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 125/351 (35%), Gaps = 23/351 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I + + +Y K F + A ++ + I F+ +E T A + Sbjct: 4 NSRIFFGIFIFVALSLVVYLFKPFLLDIFIAALLAVATSNINVLFLKLTKERKTLSAALT 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T + LFI P L+ + I + L + Sbjct: 64 TAVLFTLFIAPFLYAVIELTRYASTFNMNNITGTIDYIKNYDF-----------ALPSSI 112 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 K I + G + + + F+++ FF G + Sbjct: 113 EFLEPKFKEFIAQIDIKAITANILTNLANLGKLSAKFITDVAFILVFFFFAILYGNELVI 172 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + I + V+ + I AI +GL+ + G + +G+ Sbjct: 173 YMKKALP-MKESESGFILSEMANVMSVVLYSIIINAILQGLLFAFITIIYGY-NGFLMGI 230 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF----- 299 + A M++IP G +++ +S+Y L GN A + L+ I + ++ D L+P Sbjct: 231 LFAFMSLIPVVGGVLAWAPISLYELANGNATGAIVIALYTIIVISVIADTFLKPLVIKFI 290 Query: 300 ---LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LV P K+ L FF ++ G+ T G GL +GP ++ K ++ Sbjct: 291 NDKLVKIPTKINELLIFFAMIAGITTFGFWGLILGPAIVTFFLSTIKLYVL 341 >gi|259506962|ref|ZP_05749862.1| membrane protein [Corynebacterium efficiens YS-314] gi|259165414|gb|EEW49968.1| membrane protein [Corynebacterium efficiens YS-314] Length = 470 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 114/338 (33%), Gaps = 20/338 (5%) Query: 12 MRWMIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R + + + + + +G +L+ ++ S P + ++ K + AV Sbjct: 42 LRILFIAVAAYVGWLILGQLWRGVLPVILALIVCTVLSTP--NMWLRKLKFPPALAAVTT 99 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L +V + V WL P + A+++ Sbjct: 100 IIIFFAAIAGVFWLIAPSIARQSQTLYYQVFDGI---LSVQLWLQGDPFNLDANDV---- 152 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L+ S GM +++ +++ FFF +DG Sbjct: 153 ----DNFFNEVVGWLQNQAGTIAGEIFSGLGMAT-SVIITLGVVLVLTFFFLKDGDRFLS 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + I++ + + +G + GVP AL V Sbjct: 208 WGRQAVGETSGWHLTELLTRAWNTLAGFIRAQAIVSAVDAVFIGIGLVIVGVPMAFALSV 267 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT + IP GA + I L+ A + + + L P L + Sbjct: 268 ITFVAGFIPIVGAFTAGALAVIVALVSLGFTEAVIVLIIVVAVQQLEGNILSPILQSKAM 327 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IAV ++ Sbjct: 328 NLHPVIVLLSVTVGGTLFGIIGAFLAVPVAAMIAVAFR 365 >gi|308071200|ref|YP_003872805.1| hypothetical protein PPE_04507 [Paenibacillus polymyxa E681] gi|305860479|gb|ADM72267.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 387 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 125/316 (39%), Gaps = 5/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 LK PV+ + ++ + P+ K + + ++ + ++ + + + + Sbjct: 50 LLKTIILPVILSGVLYYLLNPLVDVLERNKVKR-IYSIIVLFLLIIGVIAIVVTSVVPVI 108 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ L+ ++ V R + G + ++ +P L + L + Sbjct: 109 RDQIQGLIQNFPDYSE---QVQRQFEKLIGSDFVNQFQNTIHINPSELASKASEKLSSFI 165 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S G++ + L+I + LF+ +DG + Q + + +F +I Sbjct: 166 NNAWTGVGSFLGVVT-ETVLAIATVPFILFYLLKDGHKLPQFILKMLPPMFRKETNRIMN 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G I++ G +L Y + G+ + L VI + +++P P+ Sbjct: 225 EMNHQVSSYIRGQIIVSFCIGALLYIGYLIIGLDYSLTLAVIASFTSVVPYLGPVIAITP 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + + + I K + P ++G +++ + F ++ G+ Sbjct: 285 ALIVALVTSPIMLLKMVIVWTVVQLIEGKFISPQIMGKSLRVHPITIIFVILTAGNLFGV 344 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + A++ VI Sbjct: 345 VGIVLAVPGYAVLKVI 360 >gi|330718619|ref|ZP_08313219.1| permease [Leuconostoc fallax KCTC 3537] Length = 402 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 130/364 (35%), Gaps = 18/364 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFF-----------APVLSALIIGFTSWPIYSSFISKKEE 57 G++ +++ +I+ +Y ++ AP++ A ++ + P+ + + + Sbjct: 22 NGLIMALLVLLIIFMIYQIRFIIEPMRALFTAVGAPIIIAGVLYYLLIPVVNWLNTHTKM 81 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV-SKVVLANQHGIPVPRWLSDIPGG 116 F + V+V+ + + + ++ LV + + + Sbjct: 82 PKKFSVGLVLVAVLAILALIVTIAVTIISDQVSGLVDNWPNYWQNSQRVINDTFATSEFQ 141 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L + Q++ S +L++ + ++++ LF+ Sbjct: 142 TVREWLSNTNSDINQTVADWSRKYLQSGVSGI-----GQIASTLTTVGVTLVASPFILFY 196 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG +S + + + + V K + G +A+ ++ Y + Sbjct: 197 MLLDGNKLSSFIADKLPSKAQTSLQSVLQEVSKQVAQYIRGQLGVALAVIIMFSIGYTII 256 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P + L + + MIP G+ ++ + I L+ G + IE I Sbjct: 257 GLPYGILLAFMAGLFNMIPYVGSILAQVPIFIVALVAGGPKLVLFALIVLVIEQPIEGHV 316 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + P ++G +K+ + L+ G G+LG+ + A++ V+ + N + Sbjct: 317 IAPKILGSALKIHPVTVIVVLLTGGHIFGVLGIILSVPTYAVVKVLVTHIYEWWRTNSDL 376 Query: 356 ISSN 359 + + Sbjct: 377 FAED 380 >gi|14521184|ref|NP_126659.1| hypothetical protein PAB0658 [Pyrococcus abyssi GE5] gi|5458402|emb|CAB49890.1| Predicted permease [Pyrococcus abyssi GE5] Length = 329 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 143/351 (40%), Gaps = 33/351 (9%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +++ I+ ++L + FF+P+ A I + +P++ + + + AV Sbjct: 1 MEVNKVVFSVIVLIILFLALKVIIPFFSPLFFAFITAYILYPVHVKISERF--NEKYSAV 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 T+ ++ ++ LL L Y + + + + +P Sbjct: 59 FLTLLLLLGALILLLILIYTLAPVVNQAYEYLSDIESLTLSIP----------------- 101 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S + L G D++ Y L ++ + ++FF +I Sbjct: 102 FIPGDIASSLQETVDKLVEIGKDYLVSITFSV----PKYLLQVVVYLTFVYFFLVKRKAI 157 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW---LAGVPSH 241 + L E L +I + +++ ++ I +G+++ + ++ VP+ Sbjct: 158 EELLSFRDERLV-----RIVKRGNVTLQALIRAWLLLNIAKGILMTVGFLAFKVSNVPTA 212 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 + G++T + + +P + + A + YL+ G+I L ++G + + + D T+RP Sbjct: 213 ILAGILTVLFSFVPLFEGWMIWLAGAFYLIKNGDILTGLGLAIYGFVLVSPLPDFTIRPK 272 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV + G++GG +GL GL IGP+++ + + +E + K Sbjct: 273 LVAREANFDEVLVLIGMIGGTWGLGLKGLIIGPIVLNVAIEMLREWKIQNK 323 >gi|116669725|ref|YP_830658.1| hypothetical protein Arth_1164 [Arthrobacter sp. FB24] gi|116609834|gb|ABK02558.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24] Length = 457 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 119/333 (35%), Gaps = 17/333 (5%) Query: 15 MIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ ++ ++ L PV+ A ++ P+ +++ + I + + Sbjct: 67 LILLVVAALIWMLSKISFLIIPVMVAALLAGLLSPVTRWLKARRVPN-GGAVAITVLGFL 125 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L L + + EL S+ + Q + WL+D P + A+++ Sbjct: 126 GLIGGSLALVGRQLVAGFSELWSEALTGIQ---QIQGWLADGPLHLTAAQMDQYLQEATA 182 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L+ S + L A FG + +I + L FF +G I L L Sbjct: 183 ALQNNSSSILSG---------ALSFGSTAGHFAAGLILALFVLIFFLLEGDRIWAFLVRL 233 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A R + S +A + + +G + GVP + LGV+ I Sbjct: 234 LPRKARAATFGAGRKGWASMVSYARIQMFVAFVDAVGIGVGAAIIGVPLALPLGVLVFIG 293 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP GA ++ + L+ NA + + + L+P ++G + L + Sbjct: 294 SFIPIVGALVTGAVAVLLALVANGWVNALVMLGIVLLVQQLESHILQPLVMGKAVALHPV 353 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G+ G ++A+ + Sbjct: 354 AVILSVAAGSYLAGIPGALFSVPILAVANSAIR 386 >gi|296330760|ref|ZP_06873236.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675767|ref|YP_003867439.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296152074|gb|EFG92947.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414011|gb|ADM39130.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 369 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 126/344 (36%), Gaps = 19/344 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTF 61 Q + +I+++ + + F P+L A I+ F P+ K Sbjct: 12 QILFVLLIIYVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKKIPR---- 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 T+S++ ++++ + L + + S+V + + + + + S+ Sbjct: 68 -----TLSILLIYLLFIGLLAFVSASVGPVITSQVTGLFNNLPDYIKQIQSLTKDLSHSQ 122 Query: 122 LWTKHLSHPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +T ++ E L + N I S + + L II + LF+ Sbjct: 123 WFTWMMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNITLVIITVPFILFYML 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + KI + + + + F G +I + G Y +AG+ Sbjct: 183 KDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGL 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + LG++ AI +IP P A ++ + + A + I + L P Sbjct: 243 PYALILGIVMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLLSP 302 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++G + L L+G G+LG+ + + A++ + Sbjct: 303 LVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFF 346 >gi|315641494|ref|ZP_07896566.1| conserved hypothetical protein [Enterococcus italicus DSM 15952] gi|315482782|gb|EFU73306.1| conserved hypothetical protein [Enterococcus italicus DSM 15952] Length = 391 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 124/343 (36%), Gaps = 12/343 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F L P + A+++ + P+ + + ++V+ L + Sbjct: 37 ISFFFTPFAIILFAILPPAIFAIVLYYMFHPLVHQLERFLP--RIWAVSLLFLAVIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +F ++ +L+ + + + +A + ++ QS Sbjct: 95 LGGVLIFPSIQEQLHQLIDEFPTIFSD-------VQQLVQNFFAKTPFADAINQSQSSLN 147 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSLG 192 + + +++ + A G +F ++I ++ I FF +D + + Sbjct: 148 EVWSKVGNFLENYLQKGAQGVGSVFSAVSTTLITLVTGPIIAFFLLKDNHRFYETSKKIL 207 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + +I++IV + I + G I+++ G++ + L G+P L + I+ Sbjct: 208 PPVMRKDANEIAQIVNQQIGAYLKGQIILSVILGIMYWPFFLLIGLPFSGILAIAAGILC 267 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP P + + ++ + A + + + P ++G +++ + Sbjct: 268 IIPYIGPFVVFLPGLIIALQVSWMMAIKFLIVWFAVQAVHGHLVVPRVMGDKLQIHPVTI 327 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F L+ GL+G+ G + I V+ K + Sbjct: 328 IFVLLVMAELFGLVGVIFGIPIYCFIKVLVIYLFRRFKRRYNR 370 >gi|321312725|ref|YP_004205012.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|291485630|dbj|BAI86705.1| hypothetical protein BSNT_04678 [Bacillus subtilis subsp. natto BEST195] gi|320018999|gb|ADV93985.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 369 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 126/344 (36%), Gaps = 19/344 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTF 61 Q + +I+F+ + + F P+L A I+ F P+ K Sbjct: 12 QILFVLLIIFVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKKIPR---- 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 T+S++ ++++ + L + + S+V + + + + + S+ Sbjct: 68 -----TLSILLIYLLFIGLLAFISASVGPIITSQVTGLFNNLPDYIKQIQALTKDLSHSQ 122 Query: 122 LWTKHLSHPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +T ++ E L + N I S + + L II + LF+ Sbjct: 123 WFTWMMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNITLVIITVPFILFYML 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + KI + + + + F G +I + G Y +AG+ Sbjct: 183 KDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGL 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + LG++ AI +IP P A ++ + + A + I + L P Sbjct: 243 PYALILGIVMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLLSP 302 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++G + L L+G G+LG+ + + A++ + Sbjct: 303 LVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFF 346 >gi|42782011|ref|NP_979258.1| hypothetical protein BCE_2955 [Bacillus cereus ATCC 10987] gi|42737935|gb|AAS41866.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 373 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 47 FISTLFFPILIALFLYFIFNPVLVFLEEKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 106 SQQLMDLVKNMPGYIKEG---KLYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 161 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 162 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 222 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 282 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 342 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 371 >gi|118478248|ref|YP_895399.1| permease [Bacillus thuringiensis str. Al Hakam] gi|118417473|gb|ABK85892.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 373 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 47 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 106 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 161 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 162 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y++ +P LG+I A +IP P A Sbjct: 222 ETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 282 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 342 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 371 >gi|319790230|ref|YP_004151863.1| protein of unknown function UPF0118 [Thermovibrio ammonificans HB-1] gi|317114732|gb|ADU97222.1| protein of unknown function UPF0118 [Thermovibrio ammonificans HB-1] Length = 353 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 107/335 (31%), Gaps = 5/335 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ L+ LK P A + + P++ F + + A ++ + + Sbjct: 14 IVVLIALLFLLKPAVMPFFIASTVAYLFHPLFGFFKKSFKGNVKLAAASTLAAIGLVIFI 73 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + +++ ++ + Q V G + + + + Sbjct: 74 TLFIILPTIFEQVQSFITYLPTLMQKLDAVIYK----TFGEHLLKRFHFNAEGFHEIIKE 129 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L I + L +++ + ++F G + + Sbjct: 130 LYSKLGNLPIGNLLSKLFSGVFSILSILINLFVIPFLTYYFLTTGDKVLELYIKTAPKRI 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 A K + V + S LG +A+ G+ L WL + + +G I ++ MIP Sbjct: 190 QAELKALIDKVHSSLSSYLLGQVAVAVFVGVYLSVGLWLVKIKYALLIGFIAGVLNMIPY 249 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + ++A L + ++ + P ++ + + Sbjct: 250 VGFFSGLIPSLLLAAFDNGTWSAVIGVLIVFLTEVGLENLIYPLVMSRTTGINPILILLA 309 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G LG+ I + + I++ + + Sbjct: 310 TFVGGYAGGFLGIVIAVPVAVMAVPIFESFLEKKE 344 >gi|314933536|ref|ZP_07840901.1| putative membrane protein [Staphylococcus caprae C87] gi|313653686|gb|EFS17443.1| putative membrane protein [Staphylococcus caprae C87] Length = 404 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 133/353 (37%), Gaps = 14/353 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +LI+ + P+ + + Sbjct: 39 VLLGIVIFIFDKVSYVFEPFIIVFNTIAAPIIVSLILFYLFNPLVNLMERYRIPR----- 93 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASEL 122 ++ + + + + + + + + + H + + + + I + S Sbjct: 94 LLGITIIYVAIVGIITLIVNLLIPIIGSQIEGFIKNSPHYLNKITQSVEKITTNSFLSSY 153 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ +S + + L F P+ AS F + + I+ LFF +DG Sbjct: 154 MSQVNDWLESAQKKIPSMLSEYFDGFGPKLAS-FAEAVSNVGVVIVTTPFILFFMLKDGH 212 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + F + + + + S G I++ G++L Y + G+ + Sbjct: 213 RFKDYSTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLLIGYSIIGLKYPL 272 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L I A+ +++P P + +I + I + + L + + F + P ++G Sbjct: 273 VLASIAAVTSVVPYLGPTIAISPAIVIAIITSPWMLLKLVIVWTLVQFFEGHFISPNVMG 332 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ L F L+ M ++G+ IG L A++ V+ + K + Sbjct: 333 KTLKIHPLTIIFILLCAGNLMNVVGVIIGIPLYAVLKVLVSHLFLLFKRRYNR 385 >gi|295695749|ref|YP_003588987.1| protein of unknown function UPF0118 [Bacillus tusciae DSM 2912] gi|295411351|gb|ADG05843.1| protein of unknown function UPF0118 [Bacillus tusciae DSM 2912] Length = 355 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 124/317 (39%), Gaps = 17/317 (5%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P + ALII + P+ + + ++ + + I+ +FL + ++ Sbjct: 45 TPFVVALIISYLLNPVVEALVKRRVPRG-----------ISILIIYAIFLLISAVAAVQG 93 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN---GIDF 148 + + V +P + I W +EL + P ++ E L F Sbjct: 94 IPALVEQVKALAANLPETVHRI--DQWLNELARQTRYLPDGIQQAVENHLNQLERWAGQF 151 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + G + LS + +F+ +D + + + SL +WKK+ + + Sbjct: 152 LGQVVASLGA-TVGQVLSAFVVPFLVFYLLKDLKMVERVVLSLAPREQRDFWKKLLQEID 210 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + G ++ G++ + Y + G+P + + I A+ +IP P A + Sbjct: 211 DALGRYVRGQLLVMALVGVLTYAGYLIIGLPFSLLMASIVAVANIIPYVGPFIGLAPAAL 270 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + A + L I I + P +VG + + L F L+ G + G+ G+ Sbjct: 271 IGLTISPAMALKVLLVNLIVQQIESNFISPAVVGRSLDIHPLAIIFALLLGGQLAGIAGM 330 Query: 329 FIGPVLMALIAVIWKES 345 ++A++ VIW+ Sbjct: 331 VFAVPVLAVLRVIWQHW 347 >gi|242373654|ref|ZP_04819228.1| permease [Staphylococcus epidermidis M23864:W1] gi|242348622|gb|EES40224.1| permease [Staphylococcus epidermidis M23864:W1] Length = 404 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 130/358 (36%), Gaps = 18/358 (5%) Query: 10 GIMRWMIMFIILVSL----YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEES 58 G+ +++ I++ Y + F AP++ +L++ + PI + + Sbjct: 34 GLTALVLLGIVIFIFDKVSYVFEPFIIVFNTIAAPIIVSLVLFYLFNPIVNLMERYRIPR 93 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGM 117 ++ + + + + + + V + + H + + + + I Sbjct: 94 -----LLGITIIYVAIVGIITLIVNLLIPLIGSQVESFIKNSPHYLSKITQSVDKITNNS 148 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S + +S + + L F + AS F + + I+ LFF Sbjct: 149 LLSGYMGQINDWLESAQKKIPSMLSDYFDGFGSKLAS-FAEAVANVGVVIVTTPFVLFFM 207 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG + F + + + + S G I++ G++L Y + G Sbjct: 208 LKDGHRFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLFIGYSIIG 267 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L I A+ +++P P + +I + I + L + + F + Sbjct: 268 LKYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAIVWTLVQFFEGHFIS 327 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P ++G +K+ L F L+ MG++G+ IG A++ V+ + K + Sbjct: 328 PNVMGKTLKIHPLTIIFILLCAGNLMGVVGVIIGIPFYAVLKVLVSHIFLLFKRRYNR 385 >gi|16080231|ref|NP_391058.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311123|ref|ZP_03592970.1| hypothetical protein Bsubs1_17271 [Bacillus subtilis subsp. subtilis str. 168] gi|221315450|ref|ZP_03597255.1| hypothetical protein BsubsN3_17187 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320366|ref|ZP_03601660.1| hypothetical protein BsubsJ_17155 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324650|ref|ZP_03605944.1| hypothetical protein BsubsS_17306 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928521|sp|O32095|YUEF_BACSU RecName: Full=UPF0118 membrane protein yueF gi|2635675|emb|CAB15168.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 369 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 126/344 (36%), Gaps = 19/344 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTF 61 Q + +I+F+ + + F P+L A I+ F P+ K Sbjct: 12 QILFVLLIIFVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKKIPR---- 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 T+S++ ++++ + L + + ++V + + + + + S+ Sbjct: 68 -----TLSILLIYLLFIGLLAFISASVGPIITAQVTGLFNNLPDYIKQIQALTKDLSHSQ 122 Query: 122 LWTKHLSHPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +T ++ E L + N I S + + L II + LF+ Sbjct: 123 WFTWMMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNITLVIITVPFILFYML 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + KI + + + + F G +I + G Y +AG+ Sbjct: 183 KDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGL 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + LG++ AI +IP P A ++ + + A + I + L P Sbjct: 243 PYALILGIVMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLLSP 302 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++G + L L+G G+LG+ + + A++ + Sbjct: 303 LVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFF 346 >gi|116492957|ref|YP_804692.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116103107|gb|ABJ68250.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 380 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 108/320 (33%), Gaps = 4/320 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A ++ + P+ + + I V + L I ++ + + L Sbjct: 60 PIILAGVLYYLINPLVDKLEQRFKLKRVLSITIIFVLITILIIAGIVSVIPVIREQSAAL 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + G+ + +L + + + + Sbjct: 120 IKNWPDYWNSGV---EKVEGFLKDPRLGDLKKQIDGIGSNTVQSWSKKATEFVDNTVTSL 176 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S G+I + II M LF+ +DG + + + + +I + + Sbjct: 177 GSVIGLIT-KIVIGIITMPFILFYLLKDGHRLPHFIAQVFPVKRRDGFIQILTEINTQLS 235 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G I+A ++ Y + G+ + LGV + +IP SI + Sbjct: 236 QYIRGQLIVAFFVAVIFFIGYSIIGLKFALTLGVAAGFLNLIPYLGSFLAMVPSIVIGAF 295 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + + IE I + + P ++G + + + L+ + GL+G+ G Sbjct: 296 VSPIMLVKVLIVFVIEQTIEGRFVSPLVLGSNLDIHPVTILVVLLASGQIFGLVGVIFGI 355 Query: 333 VLMALIAVIWKESIMAIKEN 352 A++ V++ A K+N Sbjct: 356 PAYAVLKVLFIHGFRAFKKN 375 >gi|241889494|ref|ZP_04776793.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379] gi|241863801|gb|EER68184.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379] Length = 382 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 136/334 (40%), Gaps = 19/334 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P++ A + + P+ + F K S +++A + L ++ ++ + Sbjct: 61 IVSSIITPIIVAYVFYYMLNPLVNFFEKKM--SRFIASLLAIFVGIILILIVIIGVVPII 118 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + L++ +PR++ + G + E ++ + ++ ++ + Sbjct: 119 VEQTQNLIT----------ALPRYIEVVKGYL---ETYSDNAYVQVVVEYVNNNLNVSKI 165 Query: 146 IDFIPRFASRFGMIFLDYCLS----IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + A+ + S ++ M LFF +D ++ + SL Sbjct: 166 SEKLVSVATSIAQGVVSSISSTASVLVTMPFVLFFLLKDASHFNKFVISLLPKKLKQPVA 225 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + S G ++++ G++L Y + G+ +L I A ++++P P+ Sbjct: 226 ETIDEIDGKVGSYIQGQMLVSLCIGVMLFIGYNIIGLHYAFSLATIAAFLSIVPYLGPVI 285 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + I F+ + P ++G + + L F ++ GV Sbjct: 286 AITPAMLVAASTSWIMVLKMLVVWGIVQFLEGNIISPNIMGRSMNMHPLTVIFVILIGVN 345 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G IG + +++ V+ + +++I++ K Sbjct: 346 IAGVVGAIIGIPVYSILKVLVGKLLLSIRDRYNK 379 >gi|73670404|ref|YP_306419.1| hypothetical protein Mbar_A2944 [Methanosarcina barkeri str. Fusaro] gi|72397566|gb|AAZ71839.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 368 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 122/342 (35%), Gaps = 21/342 (6%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + L ++ ++ + + PI F ++ + + +P++F+ Sbjct: 32 FAFLILLPLADGIVLGIVFAYIARPIRVKFKKHRK--------VGALVASLCIFIPIVFI 83 Query: 82 FYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 G++E+ +S V+ + +++ + E ++ L + Sbjct: 84 VGAGIVEILNQISWVIEHQTAVAAAILNFINSLNIPDKIIESINS------AIWDLFTSL 137 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G + +A G+ F+++ +SIIF +F DG + + + Sbjct: 138 LPAVGSIGLLSYAQSIGLFFINFLISIIFC----YFVLADGDRLYCAFLGVIPKEYKGVV 193 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 + + +++ F+G A+ + ++ G +AL + + ++IP A Sbjct: 194 NCYAHHLDIILKGVFIGNAYSALIVSVTSVFVFYSFGFTHVLALATLIFVASIIPLFAGY 253 Query: 260 ISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + +++ G A + I + LRP+L K+ + +G Sbjct: 254 MVLVPLALMRYFESGFRSAAIFFTVSSIIIYGPPELILRPYLTSLKSKIHPMLLMLAFLG 313 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G G+ G F P+L+ + ++ + ++F Sbjct: 314 GAFVGGIAGFFAAPILLGALVAAYRVYQDHTNPEITETCADF 355 >gi|227552502|ref|ZP_03982551.1| permease [Enterococcus faecium TX1330] gi|257888263|ref|ZP_05667916.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896848|ref|ZP_05676501.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257899696|ref|ZP_05679349.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|293378524|ref|ZP_06624687.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium PC4.1] gi|293571451|ref|ZP_06682478.1| transport protein [Enterococcus faecium E980] gi|227178352|gb|EEI59324.1| permease [Enterococcus faecium TX1330] gi|257824317|gb|EEV51249.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833413|gb|EEV59834.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257837608|gb|EEV62682.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|291608456|gb|EFF37751.1| transport protein [Enterococcus faecium E980] gi|292642853|gb|EFF61000.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium PC4.1] Length = 388 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 114/317 (35%), Gaps = 5/317 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P+ F +K ++I ++ IV + + E + Sbjct: 60 PIILAGILYYLMNPVVDYFEKRKVPR--LYSIIGLFVLVVALIVWGSVVIIPKIQE--QT 115 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 VS + Q+ + L++I ++ + + + ++ + Sbjct: 116 VSFISNFPQYVDTIDNKLTEILRDPLFNQFREQLETAGDKFMNSAGDMIQDISKSTVQSL 175 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S G + ++++ M LF+ +DG ++ + + + Sbjct: 176 GSFVGAVAT-ILVALLTMPFILFYLLKDGKRLAPYFVKFLPTRMQKPTLNVLSEMNSQVS 234 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+I + +IP +I+L I Sbjct: 235 SYIRGQLTVAFAVAIMFMIGFAIIGLEYAVTLGIIAGFLNLIPYLGSFLAMIPAIFLAIV 294 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 F + + A+E I + + P ++G + + + L+ + G++G+ +G Sbjct: 295 AGPFMIIKVLIVFAVEQTIEGRLISPLVLGNQLAIHPVTILLVLLTSGKLFGIVGVILGI 354 Query: 333 VLMALIAVIWKESIMAI 349 + A V+ Sbjct: 355 PVYAAAKVVITHVFEWY 371 >gi|254457126|ref|ZP_05070554.1| acid membrane antigen A [Campylobacterales bacterium GD 1] gi|207085918|gb|EDZ63202.1| acid membrane antigen A [Campylobacterales bacterium GD 1] Length = 349 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 134/357 (37%), Gaps = 25/357 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + PQ + + + F + A ++ ++ I +SK +S A+I Sbjct: 1 MKPQYFVAILFATSLYWMYLLYAPFLLTITIAALLAVSTSNIQE-LLSKLFKSRFSAALI 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + LF PL + +++ + +V + + + + + + P + + + Sbjct: 60 SSFLMAILFFAPLGYFLATLTIKLNSIDPQVFVGIE--VYIRELIKNPPEYLMFIKPYA- 116 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + G + + +II FF +G +I Sbjct: 117 --------VDALKDLNVNALTSKAISLTGTIGSFSAGFLKNAFLIIIFYFFAQYNGTNII 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + +++ + V+ F + + A+ EG++ G A G + + G Sbjct: 169 EFLKRVVQMSVEETT-TLAKELSSVMSVVFYSIIVTAMLEGVLFGVAVSFMGY-NGLLFG 226 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGG 303 ++ ++IP G + + +Y G+ +A + L+ I + I+ D ++P ++ Sbjct: 227 IMYGFASLIPVVGGVLMWLPFMLYEFSIGDSSSAIFIALYSVIVISIIADTFVKPLIIKE 286 Query: 304 ---------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ L FF ++ G+ T G G+ +GP + A I K KE Sbjct: 287 INNRLLKEDDTRINELVIFFAIIAGLATFGFWGMILGPAITAFFLTILKLFEARTKE 343 >gi|326381378|ref|ZP_08203072.1| hypothetical protein SCNU_00465 [Gordonia neofelifaecis NRRL B-59395] gi|326199625|gb|EGD56805.1| hypothetical protein SCNU_00465 [Gordonia neofelifaecis NRRL B-59395] Length = 435 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 115/334 (34%), Gaps = 17/334 (5%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++M + + L F+ PV+ +++ WP +SK+ + ++ Sbjct: 70 LLVMAFLFALFWVLSKFWVILLPVILGIVVATVLWPPVRWLLSKRVP-PAAATFVVLLAA 128 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + + +L + V + V W+ P Sbjct: 129 IAVIGGVVALIVPSVVDQAPQLADRAVDGVKR---VQDWIQGPP--------LNVGDDQL 177 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 SL + L+ + I + +++ ++ LFFF +DG LD Sbjct: 178 TSLVNEITSKLQKSAST-IATGVFNGVGVATSALITLFTTVVLLFFFLKDGPKFLPWLDR 236 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + +I R + + + I++ + ++G + VP L VIT + Sbjct: 237 TMGKEGAVHVSEILRRMWETLGGFIRTQAIVSFVDAALIGIGLLILDVPLAGVLIVITFM 296 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP GA ++ + L+ + +A + + L P+L + L Sbjct: 297 GGFIPIVGAFVAGALAVLIALVSNGLTSALIVLGIILAVQQLEGNVLSPWLQAKSMNLHA 356 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G G+ G F+ + +AV + Sbjct: 357 VIVLLSVTLGGSLFGITGAFLAVPAASCLAVALR 390 >gi|212223531|ref|YP_002306767.1| hypothetical membrane protein, conserved [Thermococcus onnurineus NA1] gi|212008488|gb|ACJ15870.1| hypothetical membrane protein, conserved [Thermococcus onnurineus NA1] Length = 333 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 132/343 (38%), Gaps = 30/343 (8%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I I+L ++ + +P++ A+ + + +P + + A T Sbjct: 4 EAAIWIAISLIVLYLVWETVSPILSPIIIAVTLAYILYPFHERLARRMGNR--LSAFTMT 61 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L L ++ ++ ++ V + H I W Sbjct: 62 IL--------LTILTFFFIIGFALWMNDVKHSLAHYID-------------GFFTWLLTF 100 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + P SL L + L + + + L I M+ A + + +I ++ Sbjct: 101 NLPPSLYELVQK-LAEDIPKRFEEYILGYTYSLPKLSLQAIVMVFAFYGILVNARAIKRE 159 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSHVAL 244 + SL K+ + + + G +++ +G+ + + L G+ +A Sbjct: 160 VYSLLPSENRELAIKLLERAGETLHNLLRGWLSLSVLKGIFAAAGFLLFGMAETGGAIAA 219 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG 302 G+ T I ++P G + + A ++YL+ GNI +G + + + D LRP + Sbjct: 220 GIFTVIFELLPVFGGWVVWLAGTVYLINGGNILWGILFAFYGIVFISPLPDFLLRPRIAV 279 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + G+ GG G +G+ IGP+ ++L+A + +E Sbjct: 280 RERGVNALVSLVGIFGGFLAFGFVGIIIGPLALSLLATLVEEW 322 >gi|52787063|ref|YP_092892.1| YueF [Bacillus licheniformis ATCC 14580] gi|163119626|ref|YP_080468.2| hypothetical protein BL02615 [Bacillus licheniformis ATCC 14580] gi|319647592|ref|ZP_08001811.1| hypothetical protein HMPREF1012_02850 [Bacillus sp. BT1B_CT2] gi|52349565|gb|AAU42199.1| YueF [Bacillus licheniformis ATCC 14580] gi|145903136|gb|AAU24830.2| hypothetical protein BL02615 [Bacillus licheniformis ATCC 14580] gi|317390318|gb|EFV71126.1| hypothetical protein HMPREF1012_02850 [Bacillus sp. BT1B_CT2] Length = 369 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 112/311 (36%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+L A I+ F PI K T ++ + + L + ++ Sbjct: 41 FTPILIAGILYFIFNPIVRLLEKKLP--RTLSILLIYLVFVAFIGFVLSAVGPVFTKQVT 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + + + + ++ + W + + + ++ +L + + Sbjct: 99 DLFNNIPSYVK---QIQIFIKQMSNSQWFTWIMNQDFVSVAKIESSIGEYLTSLPENITG 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S FG++ + L+ + + LF+ +DG + + KI + + + Sbjct: 156 SLTSVFGVVT-NIALTAVTVPFILFYMLKDGHRFPNLAVKILPDKYKNEGLKIFKDLYET 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G I+ + G +W+AGV + LG+I A+ +IP P A ++ + Sbjct: 215 LAAYIQGQLIVCLFVGTACFIGFWIAGVKYALILGLIIAVTNIIPYVGPFLGAAPAVIIA 274 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A + L P ++G + L L+G G+LG+ + Sbjct: 275 FLDSPTKALIALIIVVAVQQTDGNLLSPLIIGRRLNTHPLTIILLLIGAGSFGGILGMIL 334 Query: 331 GPVLMALIAVI 341 AL+ Sbjct: 335 AVPAYALLKAF 345 >gi|74318686|ref|YP_316426.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Thiobacillus denitrificans ATCC 25259] gi|74058181|gb|AAZ98621.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Thiobacillus denitrificans ATCC 25259] Length = 665 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 120/331 (36%), Gaps = 13/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + +Y L P L+ ++ + P+ +++ + A++ ++ + LF + Sbjct: 18 LLVAGLLIYLLGPILTPFLAGALLAYIFDPLVDRLEARRIPRAAGTAIVIVLAGLILFGL 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + EL +V + W+ H LK Sbjct: 78 -LLVALPLFQGQFAELSQRVPAGLDLLQTRFLPWVER--------TFGIAVSPHLDGLKA 128 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G +++PR + I ++++ + + +F+ +D I ++ +L Sbjct: 129 WLTEKATQQGANWLPRLQTGALAII-GALVNLLLIPVVMFYLLKDWDVIVGRVAALAPRP 187 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++I + V+ G + I + A W G+ + +GV+T +++ +P Sbjct: 188 WLPAARRIGSAMNAVVGEFLRGQLAVMITLSVYYSVALWAVGLDYALPIGVLTGVLSFVP 247 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTF 313 +++ + + ++ G + P LVG + L + Sbjct: 248 FLGFGLGMVLALLVALLQYPDWVGVAWVAGVYLAGQALESYVVTPRLVGERVGLHPVAVI 307 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L + G +G+ + L A + V +E Sbjct: 308 FALAAFGQLFGFVGVLLAVPLAATLLVGLRE 338 >gi|254172650|ref|ZP_04879325.1| membrane protein [Thermococcus sp. AM4] gi|214033579|gb|EEB74406.1| membrane protein [Thermococcus sp. AM4] Length = 329 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 129/351 (36%), Gaps = 28/351 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M N + + + I+ + + +P++ AL + + ++PI+ K A Sbjct: 1 MRNETLVWAIVTVVILYLVWLVVSPVVSPIILALAVAYVTYPIHERLSPKIGRKK--AAF 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T + L + LL + ++V + ++ W Sbjct: 59 LLTAVIAVLSFLFLLGFVLWINDVKYQIVRYMEISFN---------------------WL 97 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ T + I + + L I M+ + + I Sbjct: 98 QSVTISSQRINEVLTAITEGVRSRIEAYVISYTYSIPKLALEIFVMLFVYYGTLVNAEEI 157 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 ++L +L + ++ + + +++ +G +W + Sbjct: 158 GRELYNLLPPQRKEFGIRLIEAARYTLDTLLKSWLTLSVLKGSATALGFWAFRIAPTSGA 217 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 +ALG++TA + ++P G + + +YL+ + A ++ + + + D L P Sbjct: 218 IALGILTAFVELLPFLGGWLIWIPGVVYLVHTSHYVLAFLFAVYSIVFISPLPDFVLAPK 277 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L L + G+ GG+ GL+G+ IGPV + L+A + +E A++ Sbjct: 278 MTLRRRGLNALISLLGIFGGLWAFGLVGIIIGPVSLGLLATVIEEWKKAME 328 >gi|227834149|ref|YP_002835856.1| permease of the major facilitator superfamily [Corynebacterium aurimucosum ATCC 700975] gi|262183363|ref|ZP_06042784.1| permease of the major facilitator superfamily protein [Corynebacterium aurimucosum ATCC 700975] gi|227455165|gb|ACP33918.1| permease of the major facilitator superfamily [Corynebacterium aurimucosum ATCC 700975] Length = 411 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 127/344 (36%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS--------ALIIGFTSWPIYSSFISKKEESST 60 + + ++FII+V+ L G+ + A+++ +P+ + + K + Sbjct: 39 ISLAKVCLVFIIVVAGVGLAGYLLKFIWVGLLPVILAILVCTVLFPVTNWLRAHKFPRA- 97 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + + + + LVS+ + + D+P + A+ Sbjct: 98 LASITTLLGFLAIIGGVFAAMAPVVSSQGASLVSQAEGGLNKLVDMA---KDLPFEIDAA 154 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ Q + + TF+K + S + + + M+ FF +D Sbjct: 155 KV--------QEVLDDAMTFIKGQASNIATGVISGV-SMASSIAMELAIMLFVAFFILKD 205 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + + ++ V + +A +GL++G W VP Sbjct: 206 GDKFLPWLRTYTGYSAGWHATELLTRVWNTLSGFIQAQAAVAAVDGLLIGLGLWALQVPL 265 Query: 241 HVALGVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +GV+T + IP ++ A++ I L+ + A I + L+P Sbjct: 266 ALVIGVVTFFASFIPVIGAVTAGALAVIIALVSDGLTKALLALALIIIVQQVEGNVLQPM 325 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + G G++G F+ + A IAV+++ Sbjct: 326 LQSKAMGLHAAMVLLSVTVGSALAGIIGAFLAVPVAATIAVVFR 369 >gi|228901451|ref|ZP_04065636.1| hypothetical protein bthur0014_26410 [Bacillus thuringiensis IBL 4222] gi|228965851|ref|ZP_04126925.1| hypothetical protein bthur0004_26730 [Bacillus thuringiensis serovar sotto str. T04001] gi|228793842|gb|EEM41371.1| hypothetical protein bthur0004_26730 [Bacillus thuringiensis serovar sotto str. T04001] gi|228858159|gb|EEN02634.1| hypothetical protein bthur0014_26410 [Bacillus thuringiensis IBL 4222] Length = 373 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 47 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 106 SQQLMDLVKNMPGYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 161 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 162 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 222 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 282 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 342 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 371 >gi|326940684|gb|AEA16580.1| hypothetical protein CT43_CH2906 [Bacillus thuringiensis serovar chinensis CT-43] Length = 361 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPSYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 150 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|228953248|ref|ZP_04115302.1| hypothetical protein bthur0006_26330 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228959134|ref|ZP_04120833.1| hypothetical protein bthur0005_26260 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229110365|ref|ZP_04239937.1| hypothetical protein bcere0018_26180 [Bacillus cereus Rock1-15] gi|228673105|gb|EEL28377.1| hypothetical protein bcere0018_26180 [Bacillus cereus Rock1-15] gi|228800523|gb|EEM47441.1| hypothetical protein bthur0005_26260 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228806475|gb|EEM53040.1| hypothetical protein bthur0006_26330 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 373 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 47 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 106 SQQLMDLVKNMPGYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 161 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 162 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 222 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 282 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 342 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 371 >gi|163789472|ref|ZP_02183911.1| Putative transport protein [Carnobacterium sp. AT7] gi|159875326|gb|EDP69391.1| Putative transport protein [Carnobacterium sp. AT7] Length = 422 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 5/320 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A I+ + P+ KK +A I V + + + Sbjct: 83 MPIIFAGILYYLVNPLVDWMERKKIPRVLGIAWIFIVIGALIVWGITTLIPIIQEQTISI 142 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + + + + WL SE T+ +L + Sbjct: 143 IENWPIYWDNIVFQIDSWLRS----DVLSEFQTRLTDLNANLLSNVSDQANSVLDTTFTS 198 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S G + + ++II M LF+ +DG S+ + + ++ + I Sbjct: 199 IGSVVGALT-NVVIAIITMPFILFYLLKDGKSLPYHVMKMIPSKMRGGTYRLLTEINTQI 257 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 G ++A GL+ + G+ V LGV+ + +IP T +I + + Sbjct: 258 SQYIRGQLMVAFFVGLMFWIGFASIGLEYAVTLGVLAGFLNLIPYLGSFLATVPAIVIAL 317 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + AIE I + ++P ++G +++ L L+ + G+ G+ +G Sbjct: 318 VDSPSMLIKVLIVFAIEQTIEGRVIQPQILGNNLEIHPLTIIIVLLSAGKIFGVPGVILG 377 Query: 332 PVLMALIAVIWKESIMAIKE 351 A++ VI K+ Sbjct: 378 IPGYAILKVIVVHFFRWYKD 397 >gi|313681479|ref|YP_004059217.1| hypothetical protein Sulku_0350 [Sulfuricurvum kujiense DSM 16994] gi|313154339|gb|ADR33017.1| protein of unknown function UPF0118 [Sulfuricurvum kujiense DSM 16994] Length = 355 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 69/355 (19%), Positives = 131/355 (36%), Gaps = 28/355 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF---- 61 + +RWM I ++ L+ F AL++ P+Y S S+ + Sbjct: 1 MQQNNFLRWMSFGIFVLILWLFSPFLKSFFVALLLAMAVSPLYRSIKSRIDRYPALVSVA 60 Query: 62 ---LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A I ++ + + +P+ Y + + + + + +L+ W Sbjct: 61 SLVSASIVSIGLSLIIFLPIAIFLYQILDNPAKTLDMIRMIGNKIDSP--YLNLPTFLQW 118 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S+ L+ ++ K FL I FAS G + MI+ FFF Sbjct: 119 LSDPLYNLLTQIRNHKDEIIAFLAGWFGSGIKTFASMLGEMA---------MIVIFFFFL 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 L + + + + F + + I +GL G Sbjct: 170 TWYGRRLLLFLLPIIPLPRSIKRDFLDEMTIMSAVVFYTLVGVMIAQGLAFGIFIAFFEG 229 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTL 296 + + LG +T I A+IP G + + V+++ + GNI NA + L+ A+ F +D + Sbjct: 230 YNPLLLGFLTGISAIIPVVGTALVWIPVAVHEYMSGNIVNAFIISLYSWAMMAFFIDNIV 289 Query: 297 RPFLVG--------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + ++ G ++ FF +VGG+ T G G +GP ++A + Sbjct: 290 KLVILNFVNRSLSIGKRRINEFVIFFAIVGGLATFGFWGFILGPAIVAFAMTTLR 344 >gi|301054426|ref|YP_003792637.1| permease [Bacillus anthracis CI] gi|300376595|gb|ADK05499.1| conserved hypothetical permease [Bacillus cereus biovar anthracis str. CI] Length = 361 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L+T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPGYIKEG---KLYIQDLSHHRLFEWLFTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 150 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|242398490|ref|YP_002993914.1| hypothetical protein TSIB_0499 [Thermococcus sibiricus MM 739] gi|242264883|gb|ACS89565.1| hypothetical protein TSIB_0499 [Thermococcus sibiricus MM 739] Length = 329 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 140/352 (39%), Gaps = 30/352 (8%) Query: 6 LNPQGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ +++ IIL ++ ++ ++ AL + + P ++ K + A+ Sbjct: 1 MRTEHVIWFVVSIIILFVVWKTVEPLITSIIFALTVAYILHPAHTRLAQKIGSRES--AI 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L + + + + LV+ + + W + ++ Sbjct: 59 VFSAIMSLLLVGFIFGVALWFRDVTGSLVNYINES-------LEWFISLDLPPDIAK--- 108 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S T L + + + + + L I I+ + S+ Sbjct: 109 ------------SATILFERVSEKLSEYLLSYTLSIPKLLLQAIIFIVVFYGILIHSHSL 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL---AGVPSH 241 S +L SL ++ + + ++++ +G++L +++ A + Sbjct: 157 SAELYSLLPEERRDLGIELIEKARDTLNAILRTWLMLSVSKGIILTLGFYVFRVADLSGS 216 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 +A G++ ++ ++P G + + +IYLL +G IF ++GA+ + D T+RP Sbjct: 217 IAAGIVCVVLELLPVIGGWLVWLVGAIYLLTQGQIFAGIMFAIYGALLISPGPDITIRPK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LV K+ G+ GG+ G+ G+ IGPV + L+ + +E +E Sbjct: 277 LVAEGAKMNSALALIGIFGGIMAFGIKGIVIGPVALGLLLTLLEEWKEQKRE 328 >gi|42518755|ref|NP_964685.1| hypothetical protein LJ0830 [Lactobacillus johnsonii NCC 533] gi|41583041|gb|AAS08651.1| hypothetical protein LJ_0830 [Lactobacillus johnsonii NCC 533] Length = 393 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 112/328 (34%), Gaps = 19/328 (5%) Query: 25 YFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + L F F P+L A I + P+ K + +I + + + + Sbjct: 44 FVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPR----IITIILLFVIVVGG 99 Query: 78 LLFLFYYGM----LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L+++ + + LV + + P + +S Q+ Sbjct: 100 LIWIINTLIPIIQHQTDSLVKNWPTYWKDAQKGFEKIIRDPRLNGVRGGINQAISDAQTK 159 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + S + ++++ LFF +DG ++ + Sbjct: 160 MFKT----GQDSFNLALSNLSSAVNVITMIFMTLLTAPFVLFFMLKDGHRLNSYVTKFAP 215 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + S G +A G++ Y + G+ + L V+ I+ M Sbjct: 216 KKLQPSFSSLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGILNM 275 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP +I L + + + + AIE + + + P ++G + + + T Sbjct: 276 IPYFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTI 335 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G GL G+ + A+I +I Sbjct: 336 LLLIGASAVAGLWGVIFAIPVYAVIKII 363 >gi|229918356|ref|YP_002887002.1| hypothetical protein EAT1b_2641 [Exiguobacterium sp. AT1b] gi|229469785|gb|ACQ71557.1| protein of unknown function UPF0118 [Exiguobacterium sp. AT1b] Length = 389 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 112/322 (34%), Gaps = 6/322 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A + + I + + T I + ++ +F + L ++ Sbjct: 45 VPLIVAGLFFYFLVGIVDFLEKRLKGKRTLAVAITLIGLVLIFTLVFSILGPVLGEQITS 104 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV+ + + + D + +E + + ++ + T + + D Sbjct: 105 LVNAMPSIAKELQKQAFAVRDT---LLQNEFFARFMAENDEMFRNLTTNITSYLGDLFGN 161 Query: 152 FASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 AS FG + ++I+ + L + DG + + L + + I + Sbjct: 162 IASSFGQVVGFVTSAVITIVVIPFMLLYMLLDGKRLPDAIVKLLPSSYEKETRHILHDMH 221 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +RS ++A G+ W+ GV + L + + +IP P A ++ Sbjct: 222 ETVRSYVNAQLLVAFFVGITSLIGLWIVGVDYAILLALFMMVTNIIPYVGPFLGAAPAVV 281 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + + + I + P + G +K+ L L+ G++G+ Sbjct: 282 VAFIQDPIKVLWVIVVIIVVQQIESNVISPLIQGKSLKVHPLTIIIVLLVAGNLAGIIGM 341 Query: 329 FIGPVLMALIAVIWKESIMAIK 350 I A+ + + + K Sbjct: 342 LIAVPFYAVAKTVVQNIVRIYK 363 >gi|256825244|ref|YP_003149204.1| putative permease [Kytococcus sedentarius DSM 20547] gi|256688637|gb|ACV06439.1| predicted permease [Kytococcus sedentarius DSM 20547] Length = 476 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 99/282 (35%), Gaps = 14/282 (4%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 F+ + A+ + + + + L + + + ++ + V + V W Sbjct: 94 RFLRRFMT-DGLAAMTTVIGALLVLLGVLTAIAPSLVDQSTQMADRAVTGIEE---VQTW 149 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 S P + S++ Q ++ S I ++++ Sbjct: 150 ASGPPLNIQDSQIDKAITQLTQRIQEASGD---------IAGGVFTGVSAVASAFVTVLM 200 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 ++ FFF RDG + L ++ + + + + G II+ + +++ Sbjct: 201 TLVLTFFFVRDGEKFLPWISRLSGRTAAPHFLALGTRLWRTLGGYVRGQAIISAVDAVLI 260 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIE 288 G A L GVP AL ++T + +P ++ +SI + L+ A L Sbjct: 261 GIALVLLGVPMAGALIILTFLGGFVPIVGAVAVGILSILVALVSVGFTKALILLAVVLFV 320 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L+P + G +++ + G G+ G F+ Sbjct: 321 QNVEGNILQPIVQGKAMQMHEGLVLLSVTVGGSLFGIPGAFL 362 >gi|49185715|ref|YP_028967.1| hypothetical protein BAS2709 [Bacillus anthracis str. Sterne] gi|49477900|ref|YP_036984.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165869183|ref|ZP_02213843.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167632559|ref|ZP_02390886.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167637773|ref|ZP_02396052.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170685430|ref|ZP_02876654.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170704514|ref|ZP_02894980.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177649451|ref|ZP_02932453.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190565161|ref|ZP_03018081.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196032646|ref|ZP_03100060.1| putative membrane protein [Bacillus cereus W] gi|196043462|ref|ZP_03110700.1| putative membrane protein [Bacillus cereus 03BB108] gi|218904032|ref|YP_002451866.1| hypothetical protein BCAH820_2916 [Bacillus cereus AH820] gi|225864884|ref|YP_002750262.1| hypothetical protein BCA_2991 [Bacillus cereus 03BB102] gi|227814279|ref|YP_002814288.1| hypothetical protein BAMEG_1687 [Bacillus anthracis str. CDC 684] gi|229600254|ref|YP_002867167.1| hypothetical protein BAA_2971 [Bacillus anthracis str. A0248] gi|254685473|ref|ZP_05149333.1| permease [Bacillus anthracis str. CNEVA-9066] gi|254722880|ref|ZP_05184668.1| permease [Bacillus anthracis str. A1055] gi|254737930|ref|ZP_05195633.1| permease [Bacillus anthracis str. Western North America USA6153] gi|254742897|ref|ZP_05200582.1| permease [Bacillus anthracis str. Kruger B] gi|254752244|ref|ZP_05204281.1| permease [Bacillus anthracis str. Vollum] gi|254760761|ref|ZP_05212785.1| permease [Bacillus anthracis str. Australia 94] gi|270000556|ref|NP_845252.2| hypothetical protein BA_2916 [Bacillus anthracis str. Ames] gi|300117750|ref|ZP_07055521.1| permease [Bacillus cereus SJ1] gi|49179642|gb|AAT55018.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49329456|gb|AAT60102.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164715909|gb|EDR21426.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167514322|gb|EDR89689.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167532857|gb|EDR95493.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170130315|gb|EDS99176.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170670790|gb|EDT21529.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172084525|gb|EDT69583.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190563188|gb|EDV17153.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195995397|gb|EDX59351.1| putative membrane protein [Bacillus cereus W] gi|196025771|gb|EDX64440.1| putative membrane protein [Bacillus cereus 03BB108] gi|218536656|gb|ACK89054.1| putative membrane protein [Bacillus cereus AH820] gi|225787450|gb|ACO27667.1| putative membrane protein [Bacillus cereus 03BB102] gi|227006643|gb|ACP16386.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229264662|gb|ACQ46299.1| putative membrane protein [Bacillus anthracis str. A0248] gi|269850242|gb|AAP26738.2| putative membrane protein [Bacillus anthracis str. Ames] gi|298724850|gb|EFI65521.1| permease [Bacillus cereus SJ1] Length = 361 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 150 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y++ +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|325959136|ref|YP_004290602.1| hypothetical protein Metbo_1390 [Methanobacterium sp. AL-21] gi|325330568|gb|ADZ09630.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 349 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 126/324 (38%), Gaps = 10/324 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + +L +I + + +A M + VP++ + Y+ Sbjct: 26 ILFQILSLILFGAMIAYIVRHLAGKLHPFVRFE-----TLAIFLAMIILAVPIVLVAYFT 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ + + A ++ + L ++ L Sbjct: 81 IHQLFLVAVDITGALPAPNTNTTMINQTMVSNDVQSAGPINGVAANLLDEIAN--LVAQS 138 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + ++ F +I ++ ++F+F ++G ++ L + +I Sbjct: 139 VVWLVGQIISFVASLPALFTDVIVLLFSVFYFAKEGDKFVGFIEDLLPKT--PTFSEIYS 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V +++S + + A+ GL+ Y++ G P + LG++TA +P G I + A Sbjct: 197 EVDAILKSIMITNILCAVILGLLSVVLYYILGYPYILLLGILTAFSEFVPVVGPWIVYGA 256 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + ++ GN + + G + +VD +RP L G + L G + G T+G Sbjct: 257 LGVVDILTGNPVRGVIVIVVGWLIDTVVDMYIRPKLAGEFTNVHPLIFLVGFLFGALTLG 316 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 L GLFIGP+++ + V++++ Sbjct: 317 LPGLFIGPLIVGVTYVLFEKYREE 340 >gi|324326884|gb|ADY22144.1| hypothetical protein YBT020_14570 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 361 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLVFLEEKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPGYIKEG---KLYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 150 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|295697169|ref|YP_003590407.1| sporulation integral membrane protein YtvI [Bacillus tusciae DSM 2912] gi|295412771|gb|ADG07263.1| sporulation integral membrane protein YtvI [Bacillus tusciae DSM 2912] Length = 418 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 125/328 (38%), Gaps = 15/328 (4%) Query: 14 WMIMFIILVSLYFLK--GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++F+I+VS FL+ + P + L+ PI S + + A++ + V+ Sbjct: 26 LLVLFMIVVSWAFLRTLPYTMPFVIGLVTAVLLQPIVSLLERWRVPRT--AAILTAMVVI 83 Query: 72 CLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 I + L+++ E+ L ++ Q V W+S + E+ +S Sbjct: 84 LGVISLGLVYVVVQIAQEVAVLSGQLP---QIYASVRDWISY--QFQYGREIVPPSMSAE 138 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQ 187 + T L + + + + + ++ II+ +FF RD I++ Sbjct: 139 MEAMLQHFTQLGSTEVSRLLDYVLSWLHGLTGLPEWITVLVLAIISTYFFLRDRERIARG 198 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ + + R V + I+ + + + V + +G + Sbjct: 199 LVSVLPPSWDLKLTAVFRDVAHAMTGMVRAQLILTLITMAMSIIGLLVFRVEYAITIGTL 258 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++P G+ I + + LI G + + +V + P ++ + Sbjct: 259 IGLTGLVPIVGSLIVTIPWAGWCLITGQYTLGLEILALQG-VISLVRHIIEPKILADNMG 317 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 L + G + +G+LGLF+GPVL Sbjct: 318 LDTFSALIAVYVGWKILGVLGLFVGPVL 345 >gi|289705950|ref|ZP_06502324.1| aldose 1-epimerase [Micrococcus luteus SK58] gi|289557287|gb|EFD50604.1| aldose 1-epimerase [Micrococcus luteus SK58] Length = 728 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 76/205 (37%), Gaps = 1/205 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A FG ++ + + +L FF DG I + L A + R Sbjct: 476 LMNSAVSFGSTAVNIGAGLFIALFSLIFFLYDGDRIWRFLLIFVPKAHRATVGRAGRSGW 535 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + S +A + + +G + GVP + L V+ + + IP A+++ Sbjct: 536 QSLGSYVRVQIFVAFIDAVGIGIGALILGVPLAIPLAVLVFLASFIPMIGATLTGAMAVL 595 Query: 269 L-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L L+ + NA + + I L+P ++G + L L F + G +GL G Sbjct: 596 LALMSNGLVNALLMLGVVLLVQQIESNVLQPLVMGKAVALHPLAVFLAVAAGSTVLGLAG 655 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 ++A + + E Sbjct: 656 AVFAVPVLAFVNSFVRALTADTPEE 680 >gi|229097430|ref|ZP_04228392.1| hypothetical protein bcere0020_26730 [Bacillus cereus Rock3-29] gi|228686241|gb|EEL40157.1| hypothetical protein bcere0020_26730 [Bacillus cereus Rock3-29] Length = 348 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRNN 346 >gi|228940031|ref|ZP_04102605.1| hypothetical protein bthur0008_26820 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972926|ref|ZP_04133521.1| hypothetical protein bthur0003_26900 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979509|ref|ZP_04139839.1| hypothetical protein bthur0002_26870 [Bacillus thuringiensis Bt407] gi|228780206|gb|EEM28443.1| hypothetical protein bthur0002_26870 [Bacillus thuringiensis Bt407] gi|228786799|gb|EEM34783.1| hypothetical protein bthur0003_26900 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819643|gb|EEM65694.1| hypothetical protein bthur0008_26820 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 348 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPSYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|30021024|ref|NP_832655.1| hypothetical protein BC2907 [Bacillus cereus ATCC 14579] gi|206971945|ref|ZP_03232894.1| putative membrane protein [Bacillus cereus AH1134] gi|218234607|ref|YP_002367635.1| hypothetical protein BCB4264_A2927 [Bacillus cereus B4264] gi|218897990|ref|YP_002446401.1| hypothetical protein BCG9842_B2316 [Bacillus cereus G9842] gi|296503446|ref|YP_003665146.1| hypothetical protein BMB171_C2614 [Bacillus thuringiensis BMB171] gi|29896577|gb|AAP09856.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206733330|gb|EDZ50503.1| putative membrane protein [Bacillus cereus AH1134] gi|218162564|gb|ACK62556.1| putative membrane protein [Bacillus cereus B4264] gi|218540616|gb|ACK93010.1| putative membrane protein [Bacillus cereus G9842] gi|296324498|gb|ADH07426.1| hypothetical protein BMB171_C2614 [Bacillus thuringiensis BMB171] Length = 361 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPGYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 150 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|116334063|ref|YP_795590.1| permease [Lactobacillus brevis ATCC 367] gi|116099410|gb|ABJ64559.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 395 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 112/320 (35%), Gaps = 7/320 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A + + PI +K + + ++ + + L + + + Sbjct: 58 PIVLAGVGYYLLNPIVDWLETKHVKRTWSISGLFVIVAGLLAWGIISLIPMIQQQVTGLI 117 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + WL D +L + S + K Sbjct: 118 TEWPHYWREITNTTMHWLKDDRLDGIRKQLEQFNQQLSDSSSSAISSLAKNT-----VSS 172 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + ++++ LF+ RDG + + L L + R + + Sbjct: 173 VGGIVSRVVSIAVAVVTAPFILFYLLRDGHRLPEYLARLFPIKRREDVVHLLREMNLQVS 232 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + G I+A ++ + + G+P + LG+ I+ ++P G+ ++ V I Sbjct: 233 NYVRGQLIVAFIVAIMFYIGFLIIGLPFALLLGISAGILNLVPYLGSFLAMVPVVIVAAF 292 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + + IE + + + P ++G +K+ L F L+ + G++G+ +G Sbjct: 293 I-SPWMLIKVLIVFVIEQTLEGRAISPLVLGSSLKIHPLTIIFILLVAGKAFGVVGVVLG 351 Query: 332 PVLMALIAVIWKESIMAIKE 351 A+I VI E ++ Sbjct: 352 IPGYAVIKVIATEFFQWYQK 371 >gi|152975747|ref|YP_001375264.1| hypothetical protein Bcer98_1995 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024499|gb|ABS22269.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 361 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 127/328 (38%), Gaps = 5/328 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ ++K ++ V ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLVFLENQKVPR-NLAVLLLYVFIITLTAVAIGVVVPTV 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ ELV + + G ++ ++ L T+ ++++ + +LK + Sbjct: 94 SQQLMELVKNLPNYIKEG---KIYIQELSHHRLFEWLTTQDYISIETIEKNAVEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + ++ S + +I + Sbjct: 150 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPRKAVSFLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G Y++ G+P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCLFVGAFTFIGYFIIGLPYAFILGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + L I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQAVWVILVVTIVQQFESNIISPRIMSSKLNIHPLTVIVLILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + A+ + + K + Sbjct: 330 IGMILAVPAYAVTKTVVSNLVRLFKTKR 357 >gi|206973928|ref|ZP_03234846.1| putative membrane protein [Bacillus cereus H3081.97] gi|217960351|ref|YP_002338911.1| hypothetical protein BCAH187_A2961 [Bacillus cereus AH187] gi|206748084|gb|EDZ59473.1| putative membrane protein [Bacillus cereus H3081.97] gi|217064849|gb|ACJ79099.1| putative membrane protein [Bacillus cereus AH187] Length = 361 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPGYIKEG---KLYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 150 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|307721655|ref|YP_003892795.1| hypothetical protein Saut_1739 [Sulfurimonas autotrophica DSM 16294] gi|306979748|gb|ADN09783.1| protein of unknown function UPF0118 [Sulfurimonas autotrophica DSM 16294] Length = 349 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 138/354 (38%), Gaps = 29/354 (8%) Query: 13 RWMIMFIILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I + SLY++ F + A ++ ++ I + F S A ++++ Sbjct: 4 QYFIAILFATSLYWMYLLYEPFLMVMTIAALLAISTASINNYFEQLF-SSRFVAAFLSSL 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF PL + +++ L + + + +++ P + + + Sbjct: 63 LLAILFFAPLGYFLATLTIKLNHL--EPNSLKNIELYINGLITNPPEFLLFLKPYLVDSL 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L+ L A++ G + + +I+ FF +G +I + L Sbjct: 121 KGIDINSLTANALH---------VAAKVGTFSAGFVKNAFLVIVFYFFAMYNGSTIVEFL 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++R + V+ F + A+ EG + G A G + + G++ Sbjct: 172 KRVVQMSVEDST-LLARELSAVMSVVFYSIIATAMLEGALFGIAVSFMGY-NGLLFGIMY 229 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG---- 302 +++P G + + IY L G+ NA + L+ I + ++ D ++P ++ Sbjct: 230 GFASLLPVVGGILMWLPFMIYELSAGHNANAVFIALYSIIVISVIADTFIKPLIIKEINK 289 Query: 303 -----GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 KL L FF ++ G+ T G G+ +GP + A I K KE Sbjct: 290 RLLKESDAKLNELVIFFSIIAGLATFGFWGMILGPAITAFFLAILKLFEARTKE 343 >gi|69245324|ref|ZP_00603368.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880028|ref|ZP_05659681.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257882264|ref|ZP_05661917.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257885461|ref|ZP_05665114.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257891119|ref|ZP_05670772.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257893933|ref|ZP_05673586.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614642|ref|ZP_05712412.1| hypothetical protein EfaeD_02925 [Enterococcus faecium DO] gi|260560358|ref|ZP_05832534.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261208296|ref|ZP_05922969.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289565616|ref|ZP_06446062.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553298|ref|ZP_06673934.1| transport protein [Enterococcus faecium E1039] gi|293563029|ref|ZP_06677495.1| transport protein [Enterococcus faecium E1162] gi|293567678|ref|ZP_06679021.1| transport protein [Enterococcus faecium E1071] gi|294614303|ref|ZP_06694221.1| transport protein [Enterococcus faecium E1636] gi|294619152|ref|ZP_06698640.1| transport protein [Enterococcus faecium E1679] gi|294623073|ref|ZP_06701959.1| transport protein [Enterococcus faecium U0317] gi|314938320|ref|ZP_07845612.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a04] gi|314941803|ref|ZP_07848679.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133C] gi|314948645|ref|ZP_07852019.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0082] gi|314952572|ref|ZP_07855568.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133A] gi|314992262|ref|ZP_07857698.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133B] gi|314997473|ref|ZP_07862420.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a01] gi|68195854|gb|EAN10289.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814256|gb|EEV43014.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257817922|gb|EEV45250.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257821317|gb|EEV48447.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257827479|gb|EEV54105.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257830312|gb|EEV56919.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073703|gb|EEW62029.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260077553|gb|EEW65271.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289162584|gb|EFD10438.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291589613|gb|EFF21418.1| transport protein [Enterococcus faecium E1071] gi|291592857|gb|EFF24448.1| transport protein [Enterococcus faecium E1636] gi|291594577|gb|EFF25966.1| transport protein [Enterococcus faecium E1679] gi|291597442|gb|EFF28607.1| transport protein [Enterococcus faecium U0317] gi|291602522|gb|EFF32738.1| transport protein [Enterococcus faecium E1039] gi|291604943|gb|EFF34411.1| transport protein [Enterococcus faecium E1162] gi|313588482|gb|EFR67327.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a01] gi|313593167|gb|EFR72012.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133B] gi|313595341|gb|EFR74186.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133A] gi|313599419|gb|EFR78262.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133C] gi|313642318|gb|EFS06898.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a04] gi|313644898|gb|EFS09478.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0082] Length = 388 Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 113/317 (35%), Gaps = 5/317 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P+ F +K ++I ++ I + + E + Sbjct: 60 PIILAGILYYLMNPVVDYFEKRKVPR--LYSIIGLFVLVVALIAWGSVVIIPKIQE--QT 115 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 VS + Q+ + L++I ++ + + + ++ + Sbjct: 116 VSFISNFPQYVDTIDNKLTEILRDPLFNQFREQLETAGDKFMNSAGDMIQDISKSTVQSL 175 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S G + ++++ M LF+ +DG ++ + + + Sbjct: 176 GSFVGAVAT-ILVALLTMPFILFYLLKDGKQLAPYFVKFLPTRMQKPTLNVLSEMNSQVS 234 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+I + +IP +I+L I Sbjct: 235 SYIRGQLTVAFAVAIMFMIGFAVIGLEYAVTLGIIAGFLNLIPYLGSFLAMIPAIFLAIV 294 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 F + + A+E I + + P ++G + + + L+ + G++G+ +G Sbjct: 295 AGPFMIIKVLIVFAVEQTIEGRLISPLVLGNQLAIHPVTILLVLLTSGKLFGIIGVILGI 354 Query: 333 VLMALIAVIWKESIMAI 349 + A V+ Sbjct: 355 PVYAAAKVVITHVFEWY 371 >gi|196042276|ref|ZP_03109555.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196026895|gb|EDX65523.1| putative membrane protein [Bacillus cereus NVH0597-99] Length = 361 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 94 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 150 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 330 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 359 >gi|229018227|ref|ZP_04175099.1| hypothetical protein bcere0030_27580 [Bacillus cereus AH1273] gi|229024411|ref|ZP_04180862.1| hypothetical protein bcere0029_27280 [Bacillus cereus AH1272] gi|228736872|gb|EEL87416.1| hypothetical protein bcere0029_27280 [Bacillus cereus AH1272] gi|228742995|gb|EEL93123.1| hypothetical protein bcere0030_27580 [Bacillus cereus AH1273] Length = 373 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 129/330 (39%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 47 FISTLFFPILIALFLYFIFNPLLVFLENKKVPR-GLAILLLYLFIITLTGVAIGVVVPTI 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK Sbjct: 106 SQQLMDLVKNMPTYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLKEIP 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + FG+I + L I + LF+ ++DG + + S+ + +I + Sbjct: 163 NTLTSSATALFGIIT-NVALVIFTVPFILFYMFKDGHAFPGKAVSVLPESYREEGLRIIK 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G + Y + G+P LG+I A+ +IP P A Sbjct: 222 ETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAALTNIIPNLGPFIGAAP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 282 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 342 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 371 >gi|315639996|ref|ZP_07895123.1| membrane protein [Enterococcus italicus DSM 15952] gi|315484258|gb|EFU74727.1| membrane protein [Enterococcus italicus DSM 15952] Length = 395 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 114/319 (35%), Gaps = 5/319 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + P + + + + + + L I +++ + E+++ Sbjct: 67 PVVLAGILYYLMNPTVDFLEKRGVKR-----IYSIIGLFLLVIGLIVWGVVVIIPEIRDQ 121 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V + + + + ++ + S T + N + Sbjct: 122 TISFVNQFPSYVDTAEKVMNDLFSDPVFHQFQAQVASSSEKLMNSLTDIIKNVSKSTFQN 181 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F +++I M LF+ +DG ++ L ++ + + + Sbjct: 182 IGNFFGAVATIFVAVITMPFILFYLLKDGKKLAPYLVDFLPTKMRKSTLRVLTEMNQQVS 241 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ + LG++ ++ +IP +I+L I Sbjct: 242 SYIRGQLTVAFAVAVMFMIGFSIIGLEYSITLGIVAGVLNLIPYLGSFLAMIPAIFLGIV 301 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G + + IE + + + P ++G + + + F L+ + GL+G+ +G Sbjct: 302 GGPVLLLKVIIVFVIEQTLEGRFVSPLVLGSQLSIHPITILFVLLTSGKLFGLVGVILGI 361 Query: 333 VLMALIAVIWKESIMAIKE 351 + A VI K+ Sbjct: 362 PVYAAAKVIITNVFQWYKQ 380 >gi|149179846|ref|ZP_01858351.1| hypothetical protein BSG1_02485 [Bacillus sp. SG-1] gi|148852038|gb|EDL66183.1| hypothetical protein BSG1_02485 [Bacillus sp. SG-1] Length = 359 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 112/312 (35%), Gaps = 6/312 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P++ I+ + P+ + K ++ ++V+ L + + ++ Sbjct: 41 FGPIVLGGILYYLFRPLVNLLAKKMP--RAVAILLLYLAVIGLITGVVFYAGPILQRQIS 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + + L ++ W S + + +L + Sbjct: 99 SLIENTPQLIEK---FRQTLLNLQQSEWVSRFQNGDRFSLEDITNRLTDYLNEAAST-LG 154 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + II + L++ +DG +S ++ L KK+ + Sbjct: 155 SNLMNILSTITNIIVLIILIPFVLYYMLKDGNKLSGKILKLVPKKHEEEGKKVLSDMDDA 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G I++ G+++ Y + G+ + + ++T + +IP P+ + +I + Sbjct: 215 LSSYIQGQVIVSFCVGVLVYIGYLIIGLDYSLVISILTMLTNVIPFIGPLISSIPAIIVA 274 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 A + + I I + P ++G + + L LV + G LGL + Sbjct: 275 FLQEPIMALWVIVVILIVQQIEGNLISPQVMGRKLDIHPLTIILLLVAAGKFAGFLGLLL 334 Query: 331 GPVLMALIAVIW 342 A++ VI+ Sbjct: 335 AVPAYAVLKVIF 346 >gi|229173568|ref|ZP_04301111.1| hypothetical protein bcere0006_26680 [Bacillus cereus MM3] gi|228609950|gb|EEK67229.1| hypothetical protein bcere0006_26680 [Bacillus cereus MM3] Length = 348 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPLLVFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KLYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|227889594|ref|ZP_04007399.1| permease [Lactobacillus johnsonii ATCC 33200] gi|227849842|gb|EEJ59928.1| permease [Lactobacillus johnsonii ATCC 33200] Length = 393 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 113/328 (34%), Gaps = 19/328 (5%) Query: 25 YFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + L F F P+L A I + P+ K + +I + + + + Sbjct: 44 FVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPR----IITIILLFVIVVGG 99 Query: 78 LLFLFYYGM----LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L+++ + + LV + + P + LS Q+ Sbjct: 100 LIWIINTLIPIIQHQTDSLVKNWPTYWKDAQKGFEKMIRDPRLNGVRGGINQALSDAQTK 159 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + S + ++++ LFF +DG ++ + + Sbjct: 160 MFKT----GQDSFNLALSNLSSAVNVITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKIAP 215 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + S G +A G++ Y + G+ + L V+ I+ M Sbjct: 216 KKLQPSFSSLLSDINGAVASYIRGQITVAFWVGVIFAIGYSVIGLNYGITLAVLAGILNM 275 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP +I L + + + + AIE + + + P ++G + + + T Sbjct: 276 IPYFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTI 335 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G GL G+ + A+I +I Sbjct: 336 LLLIGASAVAGLWGVIFAIPVYAVIKII 363 >gi|57866873|ref|YP_188508.1| hypothetical protein SERP0929 [Staphylococcus epidermidis RP62A] gi|242242638|ref|ZP_04797083.1| permease [Staphylococcus epidermidis W23144] gi|293366676|ref|ZP_06613352.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|57637531|gb|AAW54319.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|242233774|gb|EES36086.1| permease [Staphylococcus epidermidis W23144] gi|291318977|gb|EFE59347.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|319401353|gb|EFV89564.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] gi|329725108|gb|EGG61602.1| putative membrane protein [Staphylococcus epidermidis VCU144] gi|329736684|gb|EGG72950.1| putative membrane protein [Staphylococcus epidermidis VCU045] Length = 405 Score = 102 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 132/359 (36%), Gaps = 18/359 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +L++ + PI + + Sbjct: 39 VLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYRIPR----- 93 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + +++ + + L + + S++ ++ ++ + + + Sbjct: 94 ---LLGITIIYVAIVGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNNNTIL 150 Query: 124 TKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ ++ + + D+ + F + + I LFF +D Sbjct: 151 SGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFMLKD 210 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + F + + + + S G I++ GL+L Y + G+ Sbjct: 211 GHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGLKY 270 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L I A+ +++P P + +I + I + L + + F + P + Sbjct: 271 ALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISPNV 330 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G +K+ L F L+ MG++G+ IG L A++ V+ M K + N Sbjct: 331 MGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRRYNRYYGN 389 >gi|119715222|ref|YP_922187.1| hypothetical protein Noca_0978 [Nocardioides sp. JS614] gi|119535883|gb|ABL80500.1| protein of unknown function UPF0118 [Nocardioides sp. JS614] Length = 452 Score = 102 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 111/320 (34%), Gaps = 17/320 (5%) Query: 13 RWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R++++ L +L FFA P++ AL+I P+ + A++ + Sbjct: 91 RFLVIAAAAYVLLWLVAFFAVVTIPLIVALLIAALVVPVVDGL-HRVGLPRGLAALLVVL 149 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L F ++L + + WL D P S Sbjct: 150 AGIAFVVALLTFAGQQVATGAQDLADQSAKGLGE---IKDWLRDGP--------LHASDS 198 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ L+ G + G + ++ + +FF DG I + Sbjct: 199 QINDYIQRAQDGLENTGKGIDLGSVTEVGTAVGHIFAGLFIVLFSTYFFLADGERIWAWM 258 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + R+ + I+A + L + + G+P +ALGV+ Sbjct: 259 VRLAPRAARQHVDSSGRVAWISLTQFVRATVIVAAVDALGIMVVAGILGLPFVLALGVLV 318 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P GA ++ T + L+ A + + + L+PFL+G + L Sbjct: 319 FLGAFVPMVGATVAGTVAVLVALVDQGPITALFMLGGVILVQQLEGHVLQPFLMGRWVSL 378 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + GV G+ G Sbjct: 379 HPLGVIVAIGCGVLVAGIAG 398 >gi|78777874|ref|YP_394189.1| hypothetical protein Suden_1677 [Sulfurimonas denitrificans DSM 1251] gi|78498414|gb|ABB44954.1| Protein of unknown function UPF0118 [Sulfurimonas denitrificans DSM 1251] Length = 330 Score = 102 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 135/335 (40%), Gaps = 25/335 (7%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F ++ A ++ ++ I++ F + S A+ +++ + LF VPL + + Sbjct: 6 APFLLGMIIAALLAISTSNIHNFFEKILK-SKFLAALSSSILLAVLFFVPLGYFLVTLSI 64 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + +V I + +L + P + + + ++ E + Sbjct: 65 KLNSVDPEV--FKNIEITIRDFLVNPPEYLLFLKPY---------MQTTIEDISINSIAS 113 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 +I F G + Y + +I+ FF G I L + + + +++ + Sbjct: 114 YIFSFTGDIGSLSAGYLKNSFLVIVFYFFAQYSGGFIIDLLKRVVQ-MSADEATLLAKEL 172 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 V+ F + + A+ +G++ G A G + + G++ ++IP G + + + Sbjct: 173 SSVMSVVFYSIIVNAMLQGILFGLAISYMGY-NGLLFGIMYGFASLIPVVGGVLMWLPFT 231 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGG---------PIKLPFLPTFFGL 316 +Y G+ NA + L+ + + IV D ++P ++ K+ L FF + Sbjct: 232 LYEFSMGDSSNAIFIALYTVVVISIVADTFIKPLIIKELNLRLLKEDDAKMNELIIFFAI 291 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ T G G+ +GP + A I K KE Sbjct: 292 IAGLTTFGFWGMILGPAITAFFLTILKLFEARTKE 326 >gi|152964875|ref|YP_001360659.1| hypothetical protein Krad_0907 [Kineococcus radiotolerans SRS30216] gi|151359392|gb|ABS02395.1| protein of unknown function UPF0118 [Kineococcus radiotolerans SRS30216] Length = 423 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 104/312 (33%), Gaps = 11/312 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ + A ++ V ++ + + L + ++ V Sbjct: 85 WPLAHVLRAVMP--RALAAGLSIVLLVAVVVGIFAALIPNVASQAGDVADSAVAG---LD 139 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 V W++ P + E+ L+ +++ + A Sbjct: 140 QVQTWVAGPPLNLGDDEVGNLVNQGIAELQTNAQSIALSVVGGVGTVGA-----SVGSGL 194 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 ++ + +++ FF DG + + + + IR L +A+ Sbjct: 195 ITFLLVLVLTFFCLSDGDRLLPWSRRWMGAQAHRHTVALGGRIWAAIRGYILSQAAVALV 254 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 + + +G + GVP + L V A IP GA ++ + L+ A + Sbjct: 255 DAVFIGVGLAIIGVPFALPLAVTIFFAAFIPIVGAVVTGVLAVLVALVTLGWVQALIVLG 314 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + L+P LVG + L + G G++G F+ + A++ VI + Sbjct: 315 IVLLVQQLEGNVLQPLLVGKSLALHPAVVIGSVTIGGTLFGIVGAFLAVPVAAILTVILR 374 Query: 344 ESIMAIKENKEK 355 + ++ + Sbjct: 375 YVHHELVPDEPE 386 >gi|47528209|ref|YP_019558.1| hypothetical protein GBAA_2916 [Bacillus anthracis str. 'Ames Ancestor'] gi|228915507|ref|ZP_04079096.1| hypothetical protein bthur0012_27260 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927960|ref|ZP_04091005.1| hypothetical protein bthur0010_26630 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228934173|ref|ZP_04097012.1| hypothetical protein bthur0009_26320 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229185124|ref|ZP_04312312.1| hypothetical protein bcere0004_26800 [Bacillus cereus BGSC 6E1] gi|47503357|gb|AAT32033.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|228598381|gb|EEK56013.1| hypothetical protein bcere0004_26800 [Bacillus cereus BGSC 6E1] gi|228825341|gb|EEM71135.1| hypothetical protein bthur0009_26320 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228831650|gb|EEM77242.1| hypothetical protein bthur0010_26630 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844154|gb|EEM89214.1| hypothetical protein bthur0012_27260 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 348 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y++ +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|329667697|gb|AEB93645.1| permease [Lactobacillus johnsonii DPC 6026] Length = 393 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 112/328 (34%), Gaps = 19/328 (5%) Query: 25 YFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + L F F P+L A I + P+ K + +I + + + + Sbjct: 44 FVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPR----IITIILLFVIVVGG 99 Query: 78 LLFLFYYGM----LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L+++ + + LV + + P + +S Q+ Sbjct: 100 LIWIINTLIPIIQHQTDSLVKNWPTYWKDAQKGFEKMIRDPRLNGVRGGINQAISDAQTK 159 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + S + ++++ LFF +DG ++ + Sbjct: 160 MFKT----GQDSFNLALSNLSSAVNVITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKFAP 215 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + S G +A G++ Y + G+ + L V+ I+ M Sbjct: 216 KKLQPSFSSLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGILNM 275 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP +I L + + + + AIE + + + P ++G + + + T Sbjct: 276 IPYFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTI 335 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G GL G+ + A+I +I Sbjct: 336 LLLIGASAVAGLWGVIFAIPVYAVIKII 363 >gi|269128092|ref|YP_003301462.1| hypothetical protein Tcur_3895 [Thermomonospora curvata DSM 43183] gi|268313050|gb|ACY99424.1| protein of unknown function UPF0118 [Thermomonospora curvata DSM 43183] Length = 529 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 108/339 (31%), Gaps = 22/339 (6%) Query: 21 LVSLYFL-------KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + L +G ++ ++ + P + +AV+ + ++ Sbjct: 205 VICAWLLFEAVTSARGVIVLIVVSMFLAVGLNPAVERLQRARLPRPGAVAVVF-LGLVLA 263 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+ + ++ ++++ P ++ + EL ++ Q L Sbjct: 264 FVAAGFAVIPPLTEQITNFINQL----------PSYIEQLGQNERIRELDREY----QVL 309 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + E + G + + ++I +F +I L Sbjct: 310 QKAQEAVTNPDFGQSAIDGVLGVGRALAGGVFNTLTVLILTLYFLGSLPTIKTFFYRLVP 369 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A + + I G +A G + VP + L + I A+ Sbjct: 370 RSRRARVALLGDEILARIGGYVAGTLTVASIAGTTAYIFLSIMQVPFALPLALFVGITAL 429 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP ++ + +F ++ + + + + P ++ + + T Sbjct: 430 IPLVGATIGATLACTVAFFDGMFTGIACVIFFVVYQQVENYIIHPRVMKRAVDVQPAVTI 489 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G +G++G + A +A+I +E ++ +E Sbjct: 490 IAALVGGTLLGIVGALLAIPTAAALALIIREVVLPRQET 528 >gi|182440690|ref|YP_001828409.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326781364|ref|ZP_08240629.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|178469206|dbj|BAG23726.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326661697|gb|EGE46543.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 377 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 112/324 (34%), Gaps = 14/324 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ L + +WP+ + F+ + + A + TV + + + + E EL Sbjct: 47 PLIVGLFLTTLTWPL-ARFLRRLGWWPSLAASVVTVFSLLVGAGIVALIAVPVAGESGEL 105 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V+ WA+ + + + T + + + Sbjct: 106 ADGVIAGIDK------------VREWAAGPPLNIGDDQITGALDTATAQLQDSVGSVVTT 153 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A ++ ++ + + +FFF +DG L +++ + + Sbjct: 154 AVTGVSTVVNGLVTAVLAVFLMFFFLKDGPRFLPWLTRQLPGRLATDVPEVASRCWETLG 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + + + + + +G W+ GVP + L V+T + A +P GA + + L+ Sbjct: 214 AFVRSQAFVGLLDAVFIGLGLWILGVPLVLPLAVLTFVCAFVPIVGALFAGFVAVVIALV 273 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 +A + + + +P + + L + G G++G + Sbjct: 274 SNGPMDALLVLAIIVVVQQLEGNVFQPMIQSRGLGLHAATVLLAVTLGGSLAGVVGSLLA 333 Query: 332 PVLMALIAVIWKESIMAIKENKEK 355 + A++ VIW + E+ + Sbjct: 334 VPVAAVLGVIWNYLREQLVEDAPE 357 >gi|228986008|ref|ZP_04146153.1| hypothetical protein bthur0001_26960 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156497|ref|ZP_04284588.1| hypothetical protein bcere0010_26830 [Bacillus cereus ATCC 4342] gi|228627000|gb|EEK83736.1| hypothetical protein bcere0010_26830 [Bacillus cereus ATCC 4342] gi|228773720|gb|EEM22141.1| hypothetical protein bthur0001_26960 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 348 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|228908670|ref|ZP_04072507.1| hypothetical protein bthur0013_28290 [Bacillus thuringiensis IBL 200] gi|229046614|ref|ZP_04192264.1| hypothetical protein bcere0027_26370 [Bacillus cereus AH676] gi|229070388|ref|ZP_04203633.1| hypothetical protein bcere0025_25740 [Bacillus cereus F65185] gi|229080100|ref|ZP_04212628.1| hypothetical protein bcere0023_27480 [Bacillus cereus Rock4-2] gi|229145489|ref|ZP_04273873.1| hypothetical protein bcere0012_26420 [Bacillus cereus BDRD-ST24] gi|229151127|ref|ZP_04279334.1| hypothetical protein bcere0011_26740 [Bacillus cereus m1550] gi|229179199|ref|ZP_04306553.1| hypothetical protein bcere0005_25490 [Bacillus cereus 172560W] gi|228604097|gb|EEK61564.1| hypothetical protein bcere0005_25490 [Bacillus cereus 172560W] gi|228632341|gb|EEK88963.1| hypothetical protein bcere0011_26740 [Bacillus cereus m1550] gi|228637942|gb|EEK94388.1| hypothetical protein bcere0012_26420 [Bacillus cereus BDRD-ST24] gi|228703224|gb|EEL55682.1| hypothetical protein bcere0023_27480 [Bacillus cereus Rock4-2] gi|228712742|gb|EEL64672.1| hypothetical protein bcere0025_25740 [Bacillus cereus F65185] gi|228724701|gb|EEL76008.1| hypothetical protein bcere0027_26370 [Bacillus cereus AH676] gi|228851011|gb|EEM95828.1| hypothetical protein bthur0013_28290 [Bacillus thuringiensis IBL 200] Length = 348 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|15924349|ref|NP_371883.1| hypothetical protein SAV1359 [Staphylococcus aureus subsp. aureus Mu50] gi|15926939|ref|NP_374472.1| hypothetical protein SA1192 [Staphylococcus aureus subsp. aureus N315] gi|21282975|ref|NP_646063.1| hypothetical protein MW1246 [Staphylococcus aureus subsp. aureus MW2] gi|49483552|ref|YP_040776.1| hypothetical protein SAR1371 [Staphylococcus aureus subsp. aureus MRSA252] gi|49486202|ref|YP_043423.1| hypothetical protein SAS1299 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650363|ref|YP_186247.1| hypothetical protein SACOL1395 [Staphylococcus aureus subsp. aureus COL] gi|82750951|ref|YP_416692.1| hypothetical protein SAB1215 [Staphylococcus aureus RF122] gi|87160805|ref|YP_493951.1| hypothetical protein SAUSA300_1254 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195085|ref|YP_499885.1| hypothetical protein SAOUHSC_01358 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267847|ref|YP_001246790.1| hypothetical protein SaurJH9_1420 [Staphylococcus aureus subsp. aureus JH9] gi|150393910|ref|YP_001316585.1| hypothetical protein SaurJH1_1448 [Staphylococcus aureus subsp. aureus JH1] gi|151221483|ref|YP_001332305.1| hypothetical protein NWMN_1271 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979678|ref|YP_001441937.1| hypothetical protein SAHV_1347 [Staphylococcus aureus subsp. aureus Mu3] gi|161509525|ref|YP_001575184.1| hypothetical protein USA300HOU_1293 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140615|ref|ZP_03565108.1| hypothetical protein SauraJ_03131 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317046|ref|ZP_04840259.1| hypothetical protein SauraC_13104 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733393|ref|ZP_04867558.1| permease [Staphylococcus aureus subsp. aureus TCH130] gi|255006147|ref|ZP_05144748.2| hypothetical protein SauraM_06750 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425425|ref|ZP_05601850.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428085|ref|ZP_05604483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430716|ref|ZP_05607098.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433476|ref|ZP_05609834.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257436317|ref|ZP_05612364.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|257795586|ref|ZP_05644565.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258413395|ref|ZP_05681671.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258420499|ref|ZP_05683441.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258424790|ref|ZP_05687664.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|258434729|ref|ZP_05688803.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258444695|ref|ZP_05693024.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258447470|ref|ZP_05695614.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|258449311|ref|ZP_05697414.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|258451757|ref|ZP_05699781.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|258454691|ref|ZP_05702655.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|262052169|ref|ZP_06024376.1| hypothetical protein SA930_0519 [Staphylococcus aureus 930918-3] gi|282892850|ref|ZP_06301085.1| membrane protein YrrI [Staphylococcus aureus A8117] gi|282903939|ref|ZP_06311827.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282905704|ref|ZP_06313559.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908671|ref|ZP_06316492.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910940|ref|ZP_06318743.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WBG10049] gi|282914148|ref|ZP_06321935.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282916620|ref|ZP_06324378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus D139] gi|282919070|ref|ZP_06326805.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C427] gi|282920627|ref|ZP_06328348.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282924253|ref|ZP_06331927.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C101] gi|282928918|ref|ZP_06336507.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|283770426|ref|ZP_06343318.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus H19] gi|283958123|ref|ZP_06375574.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|284024360|ref|ZP_06378758.1| hypothetical protein Saura13_07200 [Staphylococcus aureus subsp. aureus 132] gi|293501175|ref|ZP_06667026.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510137|ref|ZP_06668845.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M809] gi|293526728|ref|ZP_06671413.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|294848364|ref|ZP_06789111.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A9754] gi|295406303|ref|ZP_06816110.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8819] gi|295427873|ref|ZP_06820505.1| UPF0118 membrane protein YrrI [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275470|ref|ZP_06857977.1| hypothetical protein SauraMR_03960 [Staphylococcus aureus subsp. aureus MR1] gi|297207987|ref|ZP_06924418.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244532|ref|ZP_06928415.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8796] gi|297591166|ref|ZP_06949804.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|300912071|ref|ZP_07129514.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|304381064|ref|ZP_07363718.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13701156|dbj|BAB42451.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247130|dbj|BAB57521.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21204414|dbj|BAB95111.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241681|emb|CAG40369.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49244645|emb|CAG43076.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284549|gb|AAW36643.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] gi|82656482|emb|CAI80904.1| probable membrane protein [Staphylococcus aureus RF122] gi|87126779|gb|ABD21293.1| putative membrane protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202643|gb|ABD30453.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740916|gb|ABQ49214.1| protein of unknown function UPF0118 [Staphylococcus aureus subsp. aureus JH9] gi|149946362|gb|ABR52298.1| protein of unknown function UPF0118 [Staphylococcus aureus subsp. aureus JH1] gi|150374283|dbj|BAF67543.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721813|dbj|BAF78230.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368334|gb|ABX29305.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253728661|gb|EES97390.1| permease [Staphylococcus aureus subsp. aureus TCH130] gi|257271882|gb|EEV04020.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274926|gb|EEV06413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278844|gb|EEV09463.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281569|gb|EEV11706.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284599|gb|EEV14719.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|257789558|gb|EEV27898.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257839959|gb|EEV64427.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257843447|gb|EEV67854.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257844954|gb|EEV68994.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|257849090|gb|EEV73072.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257850188|gb|EEV74141.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257853661|gb|EEV76620.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|257857299|gb|EEV80197.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|257860588|gb|EEV83412.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|257863074|gb|EEV85838.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|259159913|gb|EEW44950.1| hypothetical protein SA930_0519 [Staphylococcus aureus 930918-3] gi|282313640|gb|EFB44033.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C101] gi|282316880|gb|EFB47254.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C427] gi|282319107|gb|EFB49459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus D139] gi|282322216|gb|EFB52540.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282325545|gb|EFB55854.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WBG10049] gi|282327489|gb|EFB57781.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330996|gb|EFB60510.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282589427|gb|EFB94517.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282594289|gb|EFB99276.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282595557|gb|EFC00521.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282764847|gb|EFC04972.1| membrane protein YrrI [Staphylococcus aureus A8117] gi|283460573|gb|EFC07663.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus H19] gi|283790272|gb|EFC29089.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817037|gb|ADC37524.1| UPF0118 membrane protein YrrI [Staphylococcus aureus 04-02981] gi|290920800|gb|EFD97863.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|291096180|gb|EFE26441.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|291467081|gb|EFF09599.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M809] gi|294825164|gb|EFG41586.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A9754] gi|294968891|gb|EFG44913.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8819] gi|295128231|gb|EFG57865.1| UPF0118 membrane protein YrrI [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887230|gb|EFH26132.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178562|gb|EFH37808.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8796] gi|297576052|gb|EFH94768.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|300886317|gb|EFK81519.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|302332974|gb|ADL23167.1| putative transporter [Staphylococcus aureus subsp. aureus JKD6159] gi|302751190|gb|ADL65367.1| putative transporter [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340373|gb|EFM06313.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438241|gb|ADQ77312.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH60] gi|315131163|gb|EFT87147.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS03] gi|315194277|gb|EFU24670.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS00] gi|315196382|gb|EFU26734.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320140309|gb|EFW32167.1| hypothetical protein HMPREF9528_01424 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143918|gb|EFW35690.1| hypothetical protein HMPREF9529_00703 [Staphylococcus aureus subsp. aureus MRSA177] Length = 402 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 140/363 (38%), Gaps = 20/363 (5%) Query: 10 GIMRWMIMFIILVSL----YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEES 58 ++ +++ I++ Y F AP++ +LI+ + PI + + Sbjct: 32 SLIALVLLGIVIFIFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPIVNMMERYRIPR 91 Query: 59 STFLAV--IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +++ +A V V+ L + L+ + + S V + Q+ + + I Sbjct: 92 VAGISIIYLAVVGVITLIVNLLIPIIGSQVD------SLVKNSPQYLEKLINSIDKIANN 145 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + S +++ SL + L F + A+ F + + I+ LFF Sbjct: 146 TFFSSYYSQINDWLNSLPKKIPSMLSEFTDGFGSKIAT-FAETIANIGVVIVTTPFVLFF 204 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + ++ F + + + + S G I++ G++L Y + Sbjct: 205 MLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVI 264 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+ + L I A+ +++P P + +I + + + L + + F+ + Sbjct: 265 GLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFI 324 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P ++G +K+ L F L+ + +G++G+ +G A++ V+ K + Sbjct: 325 SPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRF 384 Query: 357 SSN 359 N Sbjct: 385 YGN 387 >gi|229161773|ref|ZP_04289752.1| hypothetical protein bcere0009_25590 [Bacillus cereus R309803] gi|228621740|gb|EEK78587.1| hypothetical protein bcere0009_25590 [Bacillus cereus R309803] Length = 348 Score = 102 bits (255), Expect = 9e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 128/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFVFNPVLVFLENKKVPR-NLAILLLYLFIITLAGVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ + T++ ++++ + LK Sbjct: 81 SQQLMDLVKNMPTYIKEG---KIYIQELSHHRLFEWVSTQNYVSIETIEKNAIASLKE-I 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + ++ SL + +I + Sbjct: 137 PNTITSSATAVFGIITNVALVIFTVPFILFYMFKDGHAFPRKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G +++ I G Y + G+P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQSLVCIFVGAFTFIGYLIIGLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRNN 346 >gi|52142606|ref|YP_084224.1| permease [Bacillus cereus E33L] gi|222096407|ref|YP_002530464.1| hypothetical protein BCQ_2747 [Bacillus cereus Q1] gi|229139548|ref|ZP_04268119.1| hypothetical protein bcere0013_26580 [Bacillus cereus BDRD-ST26] gi|229197094|ref|ZP_04323831.1| hypothetical protein bcere0001_26450 [Bacillus cereus m1293] gi|51976075|gb|AAU17625.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] gi|221240465|gb|ACM13175.1| conserved hypothetical protein [Bacillus cereus Q1] gi|228586404|gb|EEK44485.1| hypothetical protein bcere0001_26450 [Bacillus cereus m1293] gi|228644095|gb|EEL00356.1| hypothetical protein bcere0013_26580 [Bacillus cereus BDRD-ST26] Length = 348 Score = 102 bits (255), Expect = 9e-20, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KLYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|229091915|ref|ZP_04223103.1| hypothetical protein bcere0021_27100 [Bacillus cereus Rock3-42] gi|228691396|gb|EEL45156.1| hypothetical protein bcere0021_27100 [Bacillus cereus Rock3-42] Length = 348 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|299821429|ref|ZP_07053317.1| possible permease [Listeria grayi DSM 20601] gi|299817094|gb|EFI84330.1| possible permease [Listeria grayi DSM 20601] Length = 396 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 122/326 (37%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 LK AP++ A I+ + P+ K + + ++ V + L ++ F+ Sbjct: 47 ILKTVAAPIILAGILYYLFNPVVDWLEKHKWKRGWSIGLLYLVIIGALIVL-FSFVVPAV 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L++K S E +LS T + Sbjct: 106 KDQIASLLNKFPDYWDKLTNELDNFSKTGLFDQIRERLNSNLSEITKTISSKGTGFVNSA 165 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ID I F + L+I+ LF+ +DG + + + L A+ +++ + Sbjct: 166 IDGIGSFVGTVTEV----VLAIVTTPFVLFYLLKDGKKLPEFILKLLPVNARAHSRQVLK 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 I S G I++ G++L Y + G+P + L +I A +++P P Sbjct: 222 EANHQISSYIRGQIIVSFCIGILLYIGYLIIGLPYGLTLAIIAAFTSVVPYLGPAIAITP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + I + + L + + + K + P ++G +K+ + F ++ G+ Sbjct: 282 AIIIAIVVSPWLLLKLVVVWVLVQLLEGKFISPQIMGKSLKVHPITILFVILVAGNLFGV 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 LG+ A++ V+ + K Sbjct: 342 LGVIFAVPGYAVLRVVVMHTFDWFKR 367 >gi|65320191|ref|ZP_00393150.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] Length = 357 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 31 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 90 SQQLMDLVKNMPGYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 146 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y++ +P LG+I A +IP P A Sbjct: 206 ETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 266 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 325 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 326 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 355 >gi|229128253|ref|ZP_04257234.1| hypothetical protein bcere0015_26980 [Bacillus cereus BDRD-Cer4] gi|228655112|gb|EEL10969.1| hypothetical protein bcere0015_26980 [Bacillus cereus BDRD-Cer4] Length = 357 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 31 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 90 SQQLMDLVKNMPGYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 146 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 206 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 266 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 325 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 326 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 355 >gi|220926415|ref|YP_002501717.1| putative phytochrome sensor protein [Methylobacterium nodulans ORS 2060] gi|219951022|gb|ACL61414.1| putative phytochrome sensor protein [Methylobacterium nodulans ORS 2060] Length = 805 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 119/352 (33%), Gaps = 30/352 (8%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + LYF + F P A+++ F P+ + + AV+ V++ + I Sbjct: 26 IVLAIAGLYFGRDIFVPFALAILLSFALTPLVNWLRRWRLPR--IAAVLVAVTLAFILIA 83 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL--- 133 + F+ ++++ + I + + PGG ++ T + + Sbjct: 84 GIAFVVGRQLVQLANNLPSYQTTITDKIRSLQ--ASAPGGGIVDKVTTTIKDVGKEISGE 141 Query: 134 --------------------KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + L+ + + G + + + +I Sbjct: 142 QPADNAPAQTPGSRLGSGTAQEPVTVRLEAPRAKPLEIIQTVVGPLLAPLATAGLVVIFV 201 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +F + + G + I+ +V R + ++ + G+ +G A Sbjct: 202 IFVLLEREDLRDRFIKLAGAGDLQKSTQAINDAAARVSRYLLMQ-LVVNLTYGIPIGIAL 260 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--I 291 + GVP+ + G++ A++ IP P I L + + ++ G I Sbjct: 261 YFIGVPNALLWGLLAAVLRFIPYLGPFLAALFPIALAVAVDPGWTMLFWVVGVFLAAELI 320 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L + G +GLF+ L + VI + Sbjct: 321 SNNVIEPWLYGSSTGLSSLAIIMAAIFWTSLWGPVGLFLATPLTVCLVVIGR 372 >gi|152990120|ref|YP_001355842.1| hypothetical protein NIS_0371 [Nitratiruptor sp. SB155-2] gi|151421981|dbj|BAF69485.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 347 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 137/360 (38%), Gaps = 24/360 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + + + + L F ++ A+++ S+ ++S F+ K A Sbjct: 1 MKPIHFLGVLFLIVTYFVLKVFYPFLNTMIIAILLALASYKMHSYFMKKLPG-QVLPATA 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +T + +F +P++++ + + L Q W+ L Sbjct: 60 STAVLAFIFFLPIIYIITNAATFVANI--DFDLLKQTIAQTKNWI--------VQTLQHN 109 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 SL+ E F N I+++ + A+ G ++ I ++I FF G + Sbjct: 110 SWIKSDSLQKYFEQFDIQNIINWVIQTATFLGKKSANFFKDIFLILIFYFFANLYGKDLL 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ K + + V+ F + A+ EG++ G + G + + LG Sbjct: 170 LYFQNIIP-FRKEDSKLLFENLAGVMGVVFNSIIATAVLEGILFGIIVQIYGY-NGIMLG 227 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL-------- 296 ++ ++IP G I + ++++ N A + L+ I + + T+ Sbjct: 228 ILYGFASLIPVIGGIIMWLPITLHQYFLDNTTGAIVIALYSIIVISGIADTIIKPIIIKY 287 Query: 297 --RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + + +++ L FF +V G+ + G G+ IGP ++ L I K K +E Sbjct: 288 IDQVMIEDEHVRINELLIFFSIVAGLTSYGFWGMIIGPAVITLFISILKIYPKITKLERE 347 >gi|300743806|ref|ZP_07072826.1| putative permease [Rothia dentocariosa M567] gi|300380167|gb|EFJ76730.1| putative permease [Rothia dentocariosa M567] Length = 448 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 109/310 (35%), Gaps = 14/310 (4%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K + IA + ++ L G ++ VS A Q + WL Sbjct: 92 RKHGIRAGGATAIAELGMILGIA---ALLALTGQQLVRGFVSLTNNAIQGYQQLVDWLKG 148 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + A +L Q++ T L R S G ++ ++ + Sbjct: 149 MGYELGADQLNQILNQIEQAVSNNPSTVL---------RSVSEVGSTAAEFATGVLITLF 199 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L FF +G I + L R K + + ++A + + +G Sbjct: 200 TLVFFLMEGERIWLFIVKLFPKQARDAVNGAGRAGWKSLGAYVRVQILVAAIDAVGIGVG 259 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + GVP + LGV+ + + IP GA IS + L+ A + + + Sbjct: 260 AAILGVPLAIPLGVLVFLGSFIPVIGALISGAVAVLLALVALGPVQALIMIGIVLLVQQL 319 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG-LFIGPVLMALIAVIWKESIMAIK 350 L+P ++G + L L F + GG G G LF PVL + +V+ + + Sbjct: 320 ESHILQPLIMGKAVSLHPLAVIFAVAGGSMIFGAAGALFAVPVLAVVNSVVRYLAARQWE 379 Query: 351 ENKEKISSNF 360 ++ E F Sbjct: 380 DDPELRREEF 389 >gi|228946519|ref|ZP_04108834.1| hypothetical protein bthur0007_26630 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813132|gb|EEM59438.1| hypothetical protein bthur0007_26630 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 348 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 127/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLEDKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KIYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L I + LF+ ++DG + + SL + +I + Sbjct: 137 PNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y++ +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|288905039|ref|YP_003430261.1| hypothetical protein GALLO_0834 [Streptococcus gallolyticus UCN34] gi|306831112|ref|ZP_07464273.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978008|ref|YP_004287724.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731765|emb|CBI13326.1| hypothetical membrane protein [Streptococcus gallolyticus UCN34] gi|304426678|gb|EFM29789.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177936|emb|CBZ47980.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 395 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 138/361 (38%), Gaps = 21/361 (5%) Query: 6 LNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSSF 51 LN Q ++ +I F++ ++LY F+ P++ + I+ + P+ F Sbjct: 19 LNNQAVVAVLITFLVFLTLYLFTKISFLFTPIISFIAIIMLPLVISAILYYLIKPLVD-F 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 I K+ S T I ++ L I + ++ V + + Sbjct: 78 IEKRGVSRTTSIFIVFAIIIALLIWAVASFIPTIQEQLTSFVENLPSYVRSINVEANKFL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + P E + LS+ + I N ID+ FAS + ++II Sbjct: 138 ESPWLANYQEELEEMLSNVSTKAIDYAESFSKNAIDWASNFASAIARVT----VAIIMSP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+F RD + + L ++ + K + G +AI G++ Sbjct: 194 FILFYFLRDSGKMKEGLLKTLPTRMRRPISRVLGDINKQLAGYVQGQVTVAIVVGIMFTI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ G+I + MIP G+ ++ V I +++G I + + +E Sbjct: 254 FFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGVVQGPIML-IKVLITFVVEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+F+G + A I V+ KE K Sbjct: 313 IEGRFVSPLVLGSKLSIHPITIMFILLTSGSMFGVWGVFLGIPIYASIKVVVKEIFEWYK 372 Query: 351 E 351 Sbjct: 373 R 373 >gi|289433861|ref|YP_003463733.1| hypothetical protein lse_0494 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170105|emb|CBH26645.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 389 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 124/326 (38%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 LK AP++ A I + P+ KK + +A++ V + + ++ F+ Sbjct: 47 ILKTVAAPIVLAGISYYLFNPVIDWLEKKKWKRGWAIALLYVVIIGLIILL-FSFVIPAV 105 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L + + ++ +L K ++ + + Sbjct: 106 KDQIISLFKTFPGYWD---QITQKFNEFSQSSLFDQLKDKLSTNMSDIMKTLSEKGTSVL 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I S G + + L+I+ + LF+ +DG + L + A+ +++ Sbjct: 163 NSAITSVGSIVGTVT-EVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLG 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 I S G I+++ G++L Y + G+P + L +I A +++P P Sbjct: 222 EANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + I + + L + + + K + P ++G +K+ + F ++ G+ Sbjct: 282 AIIIAIVTSPWLLVKLVIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILIAGNLFGV 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 LG+ A++ VI + K Sbjct: 342 LGVIFAVPGYAVLKVIVTHVFIWFKR 367 >gi|329766855|ref|ZP_08258383.1| hypothetical protein HMPREF0428_00080 [Gemella haemolysans M341] gi|328837580|gb|EGF87205.1| hypothetical protein HMPREF0428_00080 [Gemella haemolysans M341] Length = 382 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 124/319 (38%), Gaps = 11/319 (3%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A + + P+ + F K S +++A + + ++ ++ + + + + L++ + Sbjct: 72 AYVFYYMLNPLVNFFSKKI--SRFSASLLAILVGIITILIVIIGVVPIIVEQTQNLITAM 129 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 + SD E +L+ + + I + A Sbjct: 130 PRYIEIVKGYLEEYSDNAYVQVVVEYVNTNLNASK---------ISARLITIVTSVAQGI 180 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 ++ M LFF +D ++ + SL + + + + S Sbjct: 181 VSSISSTASVLVTMPFVLFFLLKDASKFNKFVISLLPKKLEKPVAETIDEIDEKVGSYIQ 240 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G ++++ G++L Y + G+ +L I A ++++P P+ ++ + + Sbjct: 241 GQMLVSLCIGVMLFIGYNVIGLHYAFSLATIAAFLSIVPYLGPVIAITPAMLVAASTSWV 300 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + + + F+ + P ++G + + L F ++ GV G++G +G + + Sbjct: 301 MVVKMLVVWGVVQFLEGNIISPNIMGRSMNMHPLTVIFVILIGVNISGVVGAILGIPVYS 360 Query: 337 LIAVIWKESIMAIKENKEK 355 ++ V+ + ++++K+ +K Sbjct: 361 ILKVLISKLLISLKDRYDK 379 >gi|21323795|dbj|BAB98421.1| Predicted permease [Corynebacterium glutamicum ATCC 13032] Length = 440 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 119/338 (35%), Gaps = 17/338 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF---APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + + + F+ PV A+II S +K + ++ Sbjct: 14 SLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL--RKHGVPSVVSAFI 71 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ + +L+L + + +++ I + WL P + + +L Sbjct: 72 TIGTFFAVVGAILWLIAPSIAQQSQVLYFQAFEGILSIQL--WLQGPPLNLDSGDL---- 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L+ S G +++ +++ FFF +DG Sbjct: 126 ----SRYFNEAAAWLQNQAGAIAGEIFSGLGAAT-SVIVTLGVVLVLTFFFLKDGHRFLP 180 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +G + ++ + +++ + + +G + GVP +AL V Sbjct: 181 WTRKIGGKQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALSV 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT + IP + A+++ + L+ A + + + L P L + Sbjct: 241 ITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLLQSKAM 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IAV ++ Sbjct: 301 NLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFR 338 >gi|323488048|ref|ZP_08093301.1| hypothetical protein GPDM_01865 [Planococcus donghaensis MPA1U2] gi|323398316|gb|EGA91109.1| hypothetical protein GPDM_01865 [Planococcus donghaensis MPA1U2] Length = 395 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 129/336 (38%), Gaps = 3/336 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+K P++ AL+ + PI + K + + +I + ++ L + + +F + Sbjct: 53 FMKTVVLPIVLALVFFYLLRPIL-RLLEKFKIPRIWGIIIIFLGLVGLITLLSVLVFPFL 111 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + L++ Q V +L G + SE + +L L+ Sbjct: 112 RSQFQNLIADFPEYFMQLVTAVDGFLRTSLVGDYYSESNFTLDTLLATLPDNIADTLQNT 171 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I I LSI+ + LF+ +DG + + L F +++ Sbjct: 172 VTGIISGITGLISTIT-GVILSIVIVPFILFYLLKDGEKLPEYFLKLLPPRFRDDTREVF 230 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 K + + G I+A G+++ + + G+ + LGV+ + +++P P A Sbjct: 231 SEANKQLGAYIQGQLIVAFCIGVMVYIGFLIIGMEYALLLGVLAMVTSVVPYIGPAIAIA 290 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + F L + + + + P ++G + + + F L+ G Sbjct: 291 PAAIIALVTSPFMLVKLAIVWTVVQLVEGNLISPQVMGKTMFIHPVTIIFVLLTAGSLFG 350 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 ++G+ +G + AL+ V+ K + +N Sbjct: 351 VVGVILGIPMYALLRVLVSHFYKLFKRRYNRHETNL 386 >gi|69248263|ref|ZP_00604697.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880214|ref|ZP_05659867.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257883015|ref|ZP_05662668.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257885259|ref|ZP_05664912.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257891402|ref|ZP_05671055.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257893601|ref|ZP_05673254.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614402|ref|ZP_05712172.1| hypothetical protein EfaeD_01713 [Enterococcus faecium DO] gi|260560488|ref|ZP_05832662.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261209005|ref|ZP_05923410.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289565183|ref|ZP_06445635.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553266|ref|ZP_06673903.1| transport protein [Enterococcus faecium E1039] gi|293563307|ref|ZP_06677757.1| transport protein [Enterococcus faecium E1162] gi|293569303|ref|ZP_06680601.1| transport protein [Enterococcus faecium E1071] gi|293570983|ref|ZP_06682026.1| transport protein [Enterococcus faecium E980] gi|294614981|ref|ZP_06694870.1| transport protein [Enterococcus faecium E1636] gi|294619071|ref|ZP_06698566.1| transport protein [Enterococcus faecium E1679] gi|294621470|ref|ZP_06700639.1| transport protein [Enterococcus faecium U0317] gi|68194478|gb|EAN08977.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814442|gb|EEV43200.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257818673|gb|EEV46001.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257821111|gb|EEV48245.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257827762|gb|EEV54388.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257829980|gb|EEV56587.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073490|gb|EEW61818.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260077044|gb|EEW64766.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289163004|gb|EFD10852.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291588009|gb|EFF19859.1| transport protein [Enterococcus faecium E1071] gi|291592112|gb|EFF23732.1| transport protein [Enterococcus faecium E1636] gi|291594732|gb|EFF26114.1| transport protein [Enterococcus faecium E1679] gi|291598964|gb|EFF30012.1| transport protein [Enterococcus faecium U0317] gi|291602676|gb|EFF32891.1| transport protein [Enterococcus faecium E1039] gi|291604759|gb|EFF34243.1| transport protein [Enterococcus faecium E1162] gi|291608909|gb|EFF38188.1| transport protein [Enterococcus faecium E980] Length = 372 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 115/334 (34%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPI-VKLLMKAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 99 VQQISSLASNMPDFIKQVESWLKEVAELPLFKEVD------INKYFEQLDISYGTIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 153 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 213 QLNKTLANYISGQAIECLFVGTFTFLGYMVIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A + I + + P ++G +K+ L L+ GL Sbjct: 273 AFLVTVFNDPVKALLCCVVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +KE+K+ + Sbjct: 333 LGIFLGVPFYAICKTIISYIIKIVKEDKQNENKK 366 >gi|308174870|ref|YP_003921575.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|307607734|emb|CBI44105.1| putative integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] Length = 449 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 119/324 (36%), Gaps = 6/324 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI F+ F P+L + I+ F PI K T ++ + + L Sbjct: 109 FIFQPFFGFISTLFFPILISGILFFIFNPIVRLLEKKIP--RTLAILLIYLVFIGLIAFM 166 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + ++ L + + LS W + + T+ + ++ Sbjct: 167 FTAIGPIVASQVTGLFNNFPDYINQIQSLTTQLSH---SKWFTWMMTQDYVSIEKIQQSL 223 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 FL++ + ++ FG++ + L +I + LF+ +DG + + Sbjct: 224 TGFLQSLPQNITASLSAVFGVVT-NITLVVITVPFILFYMLKDGRRFPLLAVKILPSSYR 282 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A +KI + + + F G +I + G YW+ G+P + LG++ A+ +IP Sbjct: 283 AEGRKIFNDLYVTLAAYFQGQLLICLFVGTACFIGYWIIGLPYALILGMVIAVTNIIPYL 342 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + A + + + L P ++G + L LV Sbjct: 343 GPFLGAAPAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILLLV 402 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G G+L + + + A++ Sbjct: 403 GAGSFGGILAMILAVPVYAVLKAF 426 >gi|199598004|ref|ZP_03211428.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229552624|ref|ZP_04441349.1| possible permease [Lactobacillus rhamnosus LMS2-1] gi|258540000|ref|YP_003174499.1| membrane protein [Lactobacillus rhamnosus Lc 705] gi|199591094|gb|EDY99176.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229314016|gb|EEN79989.1| possible permease [Lactobacillus rhamnosus LMS2-1] gi|257151676|emb|CAR90648.1| Conserved membrane protein [Lactobacillus rhamnosus Lc 705] Length = 392 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F P++SA + + PI + + S ++ + V+ ++ Sbjct: 32 FLFAPVATFFSTLLIPIISAGFLFYLFNPI-VKLLQRLHISRNVSILLIFLVVIGAIVLI 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ + V+ + + V ++S W L + SL+I Sbjct: 91 VMAVLPNLIYQITQFVTNIPDFLKG---VRTFISKASHYTWYQRL--NIGKYVASLQISP 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L F G +SII + + LF+F +DG + + L + Sbjct: 146 SKLLSQVLGGFSSGLPGVIGS-LASTVISIITIPVMLFYFLKDGENFVPSIQRLLPRRYH 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A + + + G I + G Y + G+P LG I ++ +IP Sbjct: 205 AEVATVFTRLNATLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGVVTIIPYL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + L I + P ++G + + L L+ Sbjct: 265 GPYIGIAPALIIAATEGWTKMLLVVLVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIILLM 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG + A+I + + ++E + Sbjct: 325 VAGNLWGLLGTILAVPTYAVIKTVITYLYELYRFHQEHKNDE 366 >gi|330506790|ref|YP_004383218.1| hypothetical protein MCON_0564 [Methanosaeta concilii GP-6] gi|328927598|gb|AEB67400.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 346 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 115/340 (33%), Gaps = 29/340 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + ++ F F ++ + + PI F +K+ S A+ Sbjct: 16 LILALAAVLMTACFAF--PFLDGIILGSVFAYVGRPIRDRFGKRKKLGSLVAAI------ 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 +VP+ + G LE+ + + + W L + + Sbjct: 68 --CVVVPIFLMLGLGSLEVATQIIALAKNQEALRY------------WLGYLMQQTATDL 113 Query: 131 QSLKILSETFLKTNGIDFIPRFASRF-----GMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S N I A+ G + ++ + +F DG Sbjct: 114 PSWARESLLSGLENAFGLIASLAASIPILQIGRMASLGIINFLISFPICYFILLDGEGFV 173 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L SL ++ + +++ F+G +I L+ ++L +P +AL Sbjct: 174 GSLISLLPDGEMRVLERYIDRIDRILSGIFIGTVYTSIVGSLIAAVIFFLFDIPRPIALA 233 Query: 246 VITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGG 303 I I M+P +++Y + A + + +++ + +RP+++ Sbjct: 234 SIVFIAGMVPVLTSWAVLVPLAVYRYFTVGLEGALFFLVISSALIYLPSELFIRPYIIST 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L GG G+ G F+ P ++ I+ I++ Sbjct: 294 RSSLHPLLVMLSFFGGALVAGIGGFFLAPAVIGAISGIYQ 333 >gi|311113049|ref|YP_003984271.1| integral membrane protein [Rothia dentocariosa ATCC 17931] gi|310944543|gb|ADP40837.1| integral membrane protein [Rothia dentocariosa ATCC 17931] Length = 448 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 105/308 (34%), Gaps = 13/308 (4%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K + IA + ++ L G ++ VS A Q + WL Sbjct: 92 RKHGIRAGGATAIAELGMILGIA---ALLALTGQQLVRGFVSLTNNAIQGYQQLVDWLKG 148 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + A +L Q++ T L R S G ++ ++ + Sbjct: 149 MGYELGADQLNQILNQIEQAVSNNPSTVL---------RSVSEVGSTAAEFATGVLITLF 199 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L FF +G I + L R K + + ++A + + +G Sbjct: 200 TLVFFLMEGERIWLFIVKLFPQQARDAVNGAGRAGWKSLGAYVRVQILVAAIDAVGIGVG 259 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + GVP + LGV+ + + IP GA IS + L+ A + + + Sbjct: 260 AAILGVPLAIPLGVLVFLGSFIPVIGALISGAVAVLLALVALGPVQALIMIGIVLLVQQL 319 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+P ++G + L L F + GG G G ++A++ + + E Sbjct: 320 ESHILQPLIMGKAVSLHPLAVIFAVAGGSMIFGAAGALFAVPVLAVVNSVVRYLAARQWE 379 Query: 352 NKEKISSN 359 N ++ Sbjct: 380 NDPELRRE 387 >gi|92114233|ref|YP_574161.1| hypothetical protein Csal_2111 [Chromohalobacter salexigens DSM 3043] gi|91797323|gb|ABE59462.1| protein of unknown function UPF0118 [Chromohalobacter salexigens DSM 3043] Length = 363 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 123/336 (36%), Gaps = 8/336 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ L L+ P +I+ + P+ ++ ++V+ V + + + L+ Sbjct: 15 LVWLLVLLEPILMPFFVGMILAYLGDPVTDWLEARGLSRRLSVSVVFLVLALNIVLACLV 74 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + G + S + N V + + G +++ + + + Sbjct: 75 LIPLLGRQLAQLAESFPAIFNWVQTTVLPEVQSLTGVDLSADFDQLRSTLMDNWRET--- 131 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + AS+ GM + ++ + + F+F D + +L L Sbjct: 132 ---GTVAAAVLAQASKSGMAVAVWLGNLALIPVTTFYFLLDWDRLKARLRDLMPRHVEPT 188 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ R +V+ + G ++ + ++ L G+ + +G++ + +++P Sbjct: 189 ITRLGRECDEVLSAFLRGQLLVMLSLAVIYAVGLSLLGLRFGLLIGLVAGLASIVPYLGV 248 Query: 260 ISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I +++ + G + L + + L+P L+G I L + F ++ Sbjct: 249 IVGISIAALVAFFQFGEWLPLLGVALVFGVGQVVESTLLQPVLLGDKIGLHPIAVIFAVL 308 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + G G+ + + A++ V+ + K ++ Sbjct: 309 AGGQLFGFTGILLALPVAAIVMVVLRYLHERYKNSR 344 >gi|261405442|ref|YP_003241683.1| hypothetical protein GYMC10_1593 [Paenibacillus sp. Y412MC10] gi|329926788|ref|ZP_08281196.1| putative membrane protein [Paenibacillus sp. HGF5] gi|261281905|gb|ACX63876.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] gi|328938988|gb|EGG35356.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 355 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 128/340 (37%), Gaps = 13/340 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W++ + L FLK AP L A+II + PI + +K S ++V+ + Sbjct: 27 WLLRPLFLDVYRFLKAVLAPFLVAMIISYVLNPIVCTLSDRKVPRS--------IAVLLI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + V L L + + L+ ++ N+H + + + + L + S Sbjct: 79 YAVFLTSLAVILINMIPMLIRQLEELNEHLPELSMNAQSLMTNLDSRLLPPGVRTGVNSW 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + E+ L DF+ ++ +++ + +F+ +D + S Sbjct: 139 FLQMESRLAGGISDFMDNIG-----NTINILFNVLIVPFLIFYILKDFEVFQRTAVSYLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + G ++ + G++ Y + G+P + L I A+ + Sbjct: 194 RSRRKSIVTLLKEIDTALGNYVRGQFLVCLIIGVLAYVGYMIVGMPYALLLASIVAVFNI 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++ + + + + + + + P +VG + + L Sbjct: 254 IPYLGPFLGAAPALVMASTISWRMVLLVAVVNMVCQTLESNVISPQVVGKKLHMHPLLII 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ G + G +GL + + A+I V+ + K Sbjct: 314 FALLVGGQVAGTVGLILAVPVFAVIKVLLQHVFAYYVRKK 353 >gi|315641191|ref|ZP_07896268.1| permease [Enterococcus italicus DSM 15952] gi|315482958|gb|EFU73477.1| permease [Enterococcus italicus DSM 15952] Length = 379 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 110/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F F PVL A + + P+ S + + + ++ ++ ++ + Sbjct: 40 FFSTLFIPVLIAGFLYYLLNPVVSLLTERFHFKRILAIALVFILLIVALVLIVVSVIPNL 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +L + + V WL +I W ++ +L S + N Sbjct: 100 VNQIAQLATNIPSFVS---DVESWLYNISQTEWLKKVDVMEELDKFNLSYGS---ILQNF 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + + +I LF+ +DG ++ + + + Sbjct: 154 LSGLSSSLGSIVSTIANAAMIVITAPFILFYMLKDGHKFVPNVEKVLSPKRSSQVSDLMG 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G YWL GV GVI + +IP P Sbjct: 214 QLNKTLSNYISGQAIECLFVGTFTFLGYWLIGVDFAFLFGVIAGLANLIPYLGPYFGLLP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I + F A + + + + P ++G + + L L+ GL Sbjct: 274 AVLVTIFNDPFKALLCCIVVLVVQQLDGNIIYPNVIGKSLAIHPLTIIIVLLVAGNLAGL 333 Query: 326 LGLFIGPVLMALIAVI 341 LG+F+G A+ I Sbjct: 334 LGIFLGVPFYAICRTI 349 >gi|258508822|ref|YP_003171573.1| membrane protein [Lactobacillus rhamnosus GG] gi|257148749|emb|CAR87722.1| Conserved membrane protein [Lactobacillus rhamnosus GG] gi|259650126|dbj|BAI42288.1| putative transporter protein [Lactobacillus rhamnosus GG] Length = 392 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F P++SA + + PI + + S ++ + V+ ++ Sbjct: 32 FLFAPVATFFSTLLIPIISAGFLFYLFNPI-VKLLQRLHISRNVSILLIFLVVIGAIVLI 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ + V+ + + V ++S W L + SL+I Sbjct: 91 VMAVLPNLIYQITQFVTNIPDFLKG---VRTFISKASHYTWYQRL--NIGKYVASLQISP 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L F G +SII + + LF+F +DG + + L + Sbjct: 146 SKLLSQVLGGFSSGLPGVIGS-LASTVISIITIPVMLFYFLKDGENFVPSIQRLLPRRYH 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A + + + G I + G Y + G+P LG I ++ +IP Sbjct: 205 AEVATVFTRLNATLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGVVTIIPYL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + L I + P ++G + + L L+ Sbjct: 265 GPYIGIAPALIIAATEGWTKMLLVVLVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIILLM 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG + A+I + + ++E + Sbjct: 325 VAGNLWGLLGTILAVPTYAVIKTVITYLYELYRFHQEHKNDE 366 >gi|219853173|ref|YP_002467605.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219547432|gb|ACL17882.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 363 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 129/364 (35%), Gaps = 24/364 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLK-----GFFAPVLSALIIGFTSWPIYSSFISKKE 56 R ++ + ++ ++ +++ + L VL AL I S P++ F Sbjct: 14 RGALVQQRDLIEQWLIVLVIAGIGVLTTVAFFPLLGIVLFALSIAMVSMPLHRRFQRFM- 72 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + A++ TV V + V ++E + + VV + Sbjct: 73 -RPSISAMLVTVCVGLVLTV-CTVATVAVLVENSDFIQLVVQTVLN-------------- 116 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 WA +S + T + I + D + I+ +AL+ Sbjct: 117 -WAVSSQGGSISLGIPIDAAQITSGVNDLIAQFTTSLKSWIEQIPDLLMDIVIFFLALYL 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F G + ++ + S + + S ++ IA+ + + + Sbjct: 176 FLEQGERLWLEILKNIPARSRRVASRFSEMAVDTMYSVYVVHLAIAVVTFFLSIPFFMVL 235 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G + V+ + ++P G + V Y L G++ + G + D Sbjct: 236 GYGHVLFFAVLCGVFQLVPFLGQTVILLFVGGYALALGDVRGILLVIFIGYPIAAVPDVV 295 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +RP L+G +++ F G GG+ MG +G +GP+LMAL+ +K +I +E Sbjct: 296 MRPLLMGQKMQVHPAILFIGFFGGIAVMGAIGFVLGPLLMALLVAAYKIAIEEFGAGREG 355 Query: 356 ISSN 359 N Sbjct: 356 DKDN 359 >gi|328958006|ref|YP_004375392.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] gi|328674330|gb|AEB30376.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] Length = 401 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 115/329 (34%), Gaps = 9/329 (2%) Query: 27 LKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ F + PV+ A ++ + P+ KK + I V + + Sbjct: 52 IRDFLSIIGLPVILAGVLYYLVNPLVDWMERKKIPRLLGITWIFIVIGALIVWGITTLIP 111 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + + + WL SE T+ +L Sbjct: 112 IIQEQTISIIGNWPTYWDNIVSQIDSWLRS----DVLSEFQTRLSDFNTNLMSNVSDQAD 167 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 S G + + ++II M LF+ +DG ++ + + + Sbjct: 168 GFVGSTFASIGSVVGALT-NVIIAIITMPFILFYLLKDGKNLPYHVMKIVPSKMRVSMYQ 226 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + I G ++A GL+ + + G+ V LGV+ + ++P Sbjct: 227 LLSEINMQISQYIRGQLMVAFFVGLMFWLGFAIIGLEYAVTLGVLAGFLNLVPYLGSFLA 286 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T +I + + + + + AIE I + ++P ++G +++ L L+ + Sbjct: 287 TVPAIVIALVDSPSMLIKVLIVFAIEQTIEGRVIQPQILGNNLEVHPLTIIIVLLSAGKI 346 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+ G+ +G A++ VI K+ Sbjct: 347 FGVPGVILGIPGYAVLKVIVVHFFRWYKD 375 >gi|21229405|ref|NP_635327.1| hypothetical protein MM_3303 [Methanosarcina mazei Go1] gi|20907998|gb|AAM32999.1| hypothetical protein MM_3303 [Methanosarcina mazei Go1] Length = 366 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 123/322 (38%), Gaps = 19/322 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 ++ L+ + + PI F ++ I + VP++F+ G++E+ Sbjct: 43 GIVLGLVFAYIARPIQVKFGKYRK--------IGALVASLCIFVPIVFIIGAGIVEILNQ 94 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 S + ++ V + + + + + + L++ ++ L + L G + + Sbjct: 95 FSWFI---ENQASVMNGILEFIHSLQIPDAYVERLNN--AIWNLFTSLLPAFGSIGLIAY 149 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A G+ + ++ + I +F DG + + + + + + +++ Sbjct: 150 AQSIGL----FVINFVISIFFCYFLLADGDRLYCAFLGVIPGDYQPIVNRYAAHLDLILK 205 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLI 271 F+G A+ + ++ G +AL + I ++IP A + ++I Sbjct: 206 GVFIGNAYSALIVSVTSVFVFYAFGFTHVLALATLIFIASVIPLFAGYMVLVPLAIVRYF 265 Query: 272 KGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + +A+ F+ ++ + + LRP+L K+ + +GG G+ G F Sbjct: 266 DQGVESASLFFIVSSLVIYGPPELILRPYLTSLKSKIHPMLLMLAFLGGAFVGGIAGFFA 325 Query: 331 GPVLMALIAVIWKESIMAIKEN 352 P+L+ + ++ I Sbjct: 326 APILLGALVAAYRVYQEQIHPE 347 >gi|268319844|ref|YP_003293500.1| hypothetical protein FI9785_1373 [Lactobacillus johnsonii FI9785] gi|262398219|emb|CAX67233.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 388 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 110/320 (34%), Gaps = 12/320 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F F P+L A I + P+ K + +I + + + + L+++ Sbjct: 52 FFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPR----IITIILLFVIVVGGLIWIINTL 107 Query: 86 M----LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + LV + P + +S Q+ + Sbjct: 108 IPIIQHQTDSLVKNWPTYWNDAQKGFEKMIRDPRLNGVRGGINQAISDAQTKMFKT---- 163 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S + ++++ LFF +DG ++ + + + Sbjct: 164 GQDSFNLALSNLSSAVNVITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKIAPKKLQPSFS 223 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + S G +A G++ Y + G+ + L V+ I+ MIP Sbjct: 224 SLLSDINGAVASYIRGQITVAFWVGVIFAIGYSVIGLNYGITLAVLAGILNMIPYFGTFI 283 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I L + + + + AIE + + + P ++G + + + T L+G Sbjct: 284 AFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASA 343 Query: 322 TMGLLGLFIGPVLMALIAVI 341 GL G+ + A+I +I Sbjct: 344 VAGLWGVIFAIPVYAVIKII 363 >gi|268679846|ref|YP_003304277.1| hypothetical protein Sdel_1219 [Sulfurospirillum deleyianum DSM 6946] gi|268617877|gb|ACZ12242.1| protein of unknown function UPF0118 [Sulfurospirillum deleyianum DSM 6946] Length = 355 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 132/356 (37%), Gaps = 29/356 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL--- 62 + + W+ + + V ++ F + AL++ T P+ + + ++ Sbjct: 1 MKNNTFLIWLSIATLCVLIWLFAPFLKSLGVALLLALTMAPLQRFLLKLLTQKTSLSTAK 60 Query: 63 -----AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A + T+ + + +PL F+ ++ + + S I + Sbjct: 61 KNLFSAALMTLFLSLIIFLPLSLFFFQLFQHPTTIIETIRTFD----------SQIHLDI 110 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + P I+ K I + ++ FL ++ +I+ FFF Sbjct: 111 TLLPSYLSWAKEPFETLIMLSNMHKDEIIALLSKWLGSGLKTFLGMLSEMVMIIVFFFFF 170 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G S+ L + L ++ + + F + + + +GL G Sbjct: 171 NLYGRSLFLFLIPIVP-LSRTIKRQFISEMSITLSVVFYTLLGVMVTQGLAFGLFIAFFD 229 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKT 295 + + LG + I ++IP G + + V+I +G++ NA + L+ A+ F +D Sbjct: 230 GYNALLLGFLAGISSVIPIVGTALVWIPVAISEYWQGDVMNAVIIALYSWAMMAFFIDNI 289 Query: 296 LRPFLV--------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ ++ GG ++ FF +V G+ G G IGP L+AL + K Sbjct: 290 VKLLMLNYVNRSMNGGEVRTNEFIIFFSIVAGLGAFGFWGFIIGPALVALAISVLK 345 >gi|163940666|ref|YP_001645550.1| hypothetical protein BcerKBAB4_2721 [Bacillus weihenstephanensis KBAB4] gi|163862863|gb|ABY43922.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 361 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 128/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 35 FISTLFFPILIALFLYFIFNPLLVFLENKKVPR-GLAILLLYLFIITLTGVAIGVVVPTI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK Sbjct: 94 SQQLMDLVKNMPTYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLKEIP 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + FG+I + L I + LF+ ++DG + + S+ + +I + Sbjct: 151 NTLTSSATALFGIIT-NVALVIFTVPFILFYMFKDGHAFPGKAVSVLPESYREEGLRIIK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G + Y + G+P LG+I A +IP P A Sbjct: 210 ETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIPNLGPFIGAAP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 270 AVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + K Sbjct: 330 IGMILAVPAYAVTKTVVSNLVRLFKTKRSK 359 >gi|73669708|ref|YP_305723.1| hypothetical protein Mbar_A2217 [Methanosarcina barkeri str. Fusaro] gi|72396870|gb|AAZ71143.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 351 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 122/330 (36%), Gaps = 11/330 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+I V++Y K FF+ +L + I + P+YS S+ + ++ ++ Sbjct: 16 IFVIAVAIYITKSFFSVILFSFFIAYLLVPLYSYLESRIKYRR--------IAAAASVLL 67 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L G+ + +V++V+ + + +I + H + + + Sbjct: 68 ALTIFILIGIRIIYVVVNEVLTLLNSPENLQQLTKNITSRVIKIIEVNVHFNSSEVTNQV 127 Query: 137 SETFLKTNGIDFIPRFASRF--GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L F P + ++II +I ++F G QL + Sbjct: 128 DQFILSLTDTYFPPTKSLVIFLTATLPFDIVAIIVALIFSYYFLLTGNKSIDQLLNFVPD 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K + + + F + + G++ +L V L + +++M Sbjct: 188 KNEKEIKLFLKELDVIYSGLFRQHFVTSAIIGVIALIGLYLLDVSYPGVLASLIFLLSMY 247 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G P + ++ Y ++ + A + ++ + D LRP L+ + + T Sbjct: 248 PLVGLPGIYLPLTAYYILLQDYNKALQILIFSLALNTLQDYYLRPKLIQEKGSVHPVITI 307 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +G+ GL IGP + + +++ Sbjct: 308 IAFGAPLLVIGITGLVIGPAVYGFLLALYR 337 >gi|303237018|ref|ZP_07323590.1| putative membrane protein [Prevotella disiens FB035-09AN] gi|302482798|gb|EFL45821.1| putative membrane protein [Prevotella disiens FB035-09AN] Length = 376 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 142/367 (38%), Gaps = 19/367 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKE 56 M + + +RW+++ ++ S+ ++ + + P A ++ + P+ + K + Sbjct: 1 MLDEKITFDKFIRWVLIAALVFSILYIVNYLSHVLLPFFIAWLLAYLLNPVVNFVQHKMK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLF-LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 LAVI T+ ++ I +++ + + + ++L + Q P Sbjct: 61 VKVRALAVIITMLLVVAIITGVMYTIIPPMVDQFEKLGAVANRYVQQNTPSNNL------ 114 Query: 116 GMWASELWTKHLSHPQSLKILSE-TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W + ++L + T N I + + I L S+I ++ L Sbjct: 115 TAWIKDWIQEYLPQINEYFKSKDFTETIKNAIPKLFTVVGQTASIVLSIVASLITLLY-L 173 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF D + + + ++WK + + V + G ++A+ G++ + Sbjct: 174 FFILLDYDYLVKNFVRIFPKKHRSFWKDLMQDVETEMNKYIRGQGLVALTMGILFCIGFT 233 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIE 288 + G P + +G++ I+ +IP ++ ++ L+ KG F L AI Sbjct: 234 IIGFPMAIGMGILIGILTLIPYLHSLALIPMAFLSLLEAADKGQNFWVVFGTAILVFAII 293 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + D + P ++G + L L +G +GL I L LI WK + Sbjct: 294 QLLCDLVVTPRIMGKTMNLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWKRYVTK 353 Query: 349 IKENKEK 355 ENK+K Sbjct: 354 EDENKQK 360 >gi|310644432|ref|YP_003949191.1| hypothetical membrane protein [Paenibacillus polymyxa SC2] gi|309249383|gb|ADO58950.1| Hypothetical membrane protein [Paenibacillus polymyxa SC2] Length = 381 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 125/318 (39%), Gaps = 5/318 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + LK PV+ + ++ + P+ K + + V+ + + + IV + + Sbjct: 48 IVLLKTIILPVILSGVLYYLLNPLVDVLERNKVKRVYSIVVLFLLIIGIIAIV-ITSVVP 106 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ L+ V + V + + G + ++ P L + L Sbjct: 107 VIRDQIQGLIQNVPAYTE---QVKQQFERLIGSNFVNQFQNTIQIDPSELASKASEKLSG 163 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + S G+I + L+I + LF+ +DG + Q + + +F +I Sbjct: 164 FINNAWTGVGSFLGVIT-ETVLAIATVPFILFYLLKDGHKLPQWILKMLPPMFRKETDRI 222 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + S G I++ G++L Y + G+ + L VI + +++P P+ Sbjct: 223 MTEMNHQVSSYIRGQIIVSFCIGVLLYIGYLIIGLDYSLTLAVIASFTSVVPYLGPVIAI 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + I + + + + I K + P ++G +++ + F ++ Sbjct: 283 TPALIVAIVTSPIMLLKMVIVWTVVQLIEGKFISPQIMGKSLRVHPITIIFVILTAGNLF 342 Query: 324 GLLGLFIGPVLMALIAVI 341 G++G+ + A++ VI Sbjct: 343 GVVGIVLAVPGYAVLKVI 360 >gi|229191014|ref|ZP_04318004.1| hypothetical protein bcere0002_26780 [Bacillus cereus ATCC 10876] gi|228592412|gb|EEK50241.1| hypothetical protein bcere0002_26780 [Bacillus cereus ATCC 10876] Length = 348 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 126/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLIFLENKKVPR-NLAILLLYLFIITLTAVGVGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T++ ++++ + +LK + Sbjct: 81 SQQLMDLVKNMPGYIKEG---KVYIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DI 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + SL + +I + Sbjct: 137 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ I G Y + +P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVFPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + + A+ + + K + Sbjct: 317 IGMILAVPVYAVTKTVVSNLVRLFKTKRSN 346 >gi|296273984|ref|YP_003656615.1| hypothetical protein Arnit_2458 [Arcobacter nitrofigilis DSM 7299] gi|296098158|gb|ADG94108.1| protein of unknown function UPF0118 [Arcobacter nitrofigilis DSM 7299] Length = 355 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 134/343 (39%), Gaps = 28/343 (8%) Query: 13 RWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ ++ I +++ YFL F + AL++ + + ++ K + + + + T+ Sbjct: 4 QYFLISIGVITFYFLIELFNPFLKAMSVALLLAVATNTLSNNVSIKIK-NKFISSTLMTI 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F +PLL+ + + + + + ++ W++ +P L Sbjct: 63 VLAFVFFIPLLYCIFSFATLINNIDQQAL--SKMLTKFESWVALLP---------NDFLI 111 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L I+ + F + G + + ++ ++I FFF +S L Sbjct: 112 IKEQLTDAISKINIKEFIESLLSFGAYLGKNSAKFIIDMVMILIFYFFFNFYSVELSSYL 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL L + V+ + AI EG + G G + LGV+ Sbjct: 172 KSLLP-LKKEDASVLFFESSTVMSVVLYSVLATAILEGFLFGIFITFFGYDG-ILLGVLY 229 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLV----- 301 ++IP G I + +++Y ++ N + ++ + + I D ++P ++ Sbjct: 230 GFASLIPVVGGLIMWLPMALYEGFTVSLTNGLIIAIYSVVVIAIFADTFVKPVIIKYINL 289 Query: 302 ---GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L FF ++ G+ T G G+ IGP +++ I Sbjct: 290 KVVKTKANINELLIFFSIIAGLSTFGFWGMIIGPAMVSFFISI 332 >gi|221195860|ref|ZP_03568913.1| putative membrane protein [Atopobium rimae ATCC 49626] gi|221184334|gb|EEE16728.1| putative membrane protein [Atopobium rimae ATCC 49626] Length = 470 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 108/315 (34%), Gaps = 2/315 (0%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + I+ F P+ + + K + A+IA + V+ + + + + + E L+ Sbjct: 53 LAIGGIVAFICAPLTNKLETWKVPRA-LSALIALIVVLLILVGFIALIAQPLIDESLILL 111 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 L + + + + I + ++ ++ A Sbjct: 112 RNAPLYARQIQDMVQE-AWITYDAIGNSAVRSTVNSIILQASNLGVSFAGEAFRWLSANA 170 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 ++ +S ++ ++ +D + ++L + + + I+ + + Sbjct: 171 LSNISTLGEHFMSFFLGLVLAYWLAKDYPVMVRELAVIAGPQRDDEVRLLLAILSRSVGG 230 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 + +I G++ P +G I ++ +IP P+ +++ L + Sbjct: 231 YMRSTIVTSIANGVLAYVGCLCIQNPYAGLIGTIVGVLHIIPVVGPVFSAGIALILSVLQ 290 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + L + + D L P ++ +K+ + G++ G G++G + Sbjct: 291 SPMLGLWTLLVLVVAQNVTDNVLSPVVMASSVKVHPGLSLVGIMIGGALGGIVGTILAIP 350 Query: 334 LMALIAVIWKESIMA 348 + A + ++ A Sbjct: 351 ITAALRGVFVYYFEA 365 >gi|227505861|ref|ZP_03935910.1| integral membrane protein [Corynebacterium striatum ATCC 6940] gi|227197559|gb|EEI77607.1| integral membrane protein [Corynebacterium striatum ATCC 6940] Length = 430 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 126/344 (36%), Gaps = 22/344 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS--------ALIIGFTSWPIYSSFISKKEESST 60 + + ++FII+V+ L G+ + A+++ +P+ + + K + Sbjct: 58 ISLAKVCLVFIIVVAGVGLAGYLLKFIWVGLLPVILAILVCTVLFPVTNWLRAHKFPRA- 116 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + + + + LVS+ + + D+P + A+ Sbjct: 117 LASITTLLGFLAIIGGVFAAMAPVVSSQGASLVSQAEGGLNKLVDMA---KDLPFEIDAA 173 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ Q + + F+K S + ++++ M+ FF +D Sbjct: 174 KV--------QEVLDDAIAFIKGQASQIATGVISGV-SMASSIVMALVIMLFVAFFILKD 224 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + + ++ V + +A + +++G W VP Sbjct: 225 GDKFLPWLRTYTGYSAGWHATELLTRVWNTLSGFIQAQAAVAAVDAILIGLGLWALQVPL 284 Query: 241 HVALGVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +GV+T + IP ++ A++ I L+ + A I + L+P Sbjct: 285 ALVIGVVTFFASFIPVIGAVTAGALAVIIALVSDGLTKALLALALIIIVQQVEGNVLQPM 344 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + G G++G F+ + A IAV+++ Sbjct: 345 LQSKAMGLHAAMVLLSVTVGSALAGIIGAFLAVPVAATIAVVFR 388 >gi|315230246|ref|YP_004070682.1| hypothetical protein TERMP_00482 [Thermococcus barophilus MP] gi|315183274|gb|ADT83459.1| hypothetical membrane protein [Thermococcus barophilus MP] Length = 346 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 132/356 (37%), Gaps = 30/356 (8%) Query: 6 LNPQGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ I IIL ++ ++ +P++ +L I + P + K + AV Sbjct: 1 MKTESLVWLGISLIILFLVWRTVEPLISPIIFSLAIAYIFHPFHMRLSQKFGNKKS--AV 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T + L V L+ + + L + W Sbjct: 59 MLTAMMALLAGVLLIGAALWLRDVLNYLYVYIGDFFN---------------------WL 97 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ P + KT + + + + L I + + + + Sbjct: 98 LGVNLPFGIGESLHALSKT-IPEKLGDILLGYTFSLPKFLLQAIVFLALFYAILTNSEFL 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 + ++ L + + + ++++ +G+ L + L + Sbjct: 157 AMEVYRLLPRENRELGIHLVERAKITLNAILRTWLMLSVLKGIFLTVGFVLFEITTVSGA 216 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 +A G++ ++ ++P G I + + YL+ GNI ++GA+ + I D T+RP Sbjct: 217 IAAGILCIVLELLPVIGGWILWAIGAAYLIKTGNIALGVLFAVYGAVFISPIPDITIRPK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LV K+ + G+ GG+ + G+ G+ IGPV + L+ + +E KE K Sbjct: 277 LVAEGAKVSSVVALVGIFGGIMSFGIKGVIIGPVALGLLVTLLEEWKEQEKETLSK 332 >gi|326201133|ref|ZP_08191005.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] gi|325988701|gb|EGD49525.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] Length = 349 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 118/319 (36%), Gaps = 11/319 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A +I + +P+ F K + ++ V + I +++ + K Sbjct: 35 LFPFFIAALIAYIIYPMVIRFERK-GVKRSVSIIMIYVFIALTLIFFGIYIMPEVLSNAK 93 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 EL + + N + +S I W E+ + + + + Sbjct: 94 ELFKTLPNITNSYQEYFNNCISRIKASKWPPEVKNLIFNEINYGSGFLQIYAGRIMKKTL 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 AS + L+I+ +I ++F +D ++ L + R + Sbjct: 154 SVLASSIVI-----ILNIVLSMIIAYYFLKDAETLKNSTLMLVPKKMRNDFINTGRELNA 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + G A+ G + +LAG+ LG++ + MIP G + Sbjct: 209 IATHFIQGQLTTALIVGSMETIGLYLAGIKYPFVLGLLGGVANMIPYFGPFLGAIPAVAV 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L++ A ++ I + +D + P ++ G + L + T ++ G G++G Sbjct: 269 ALLQSPYKAALAALVF--IVVQQIDNAFISPKIIEGKLGLHPVTTIIAVLVGGEFFGIIG 326 Query: 328 LFIGPVLMALIAVIWKESI 346 + IG + A++ VI+K++I Sbjct: 327 MLIGVPVAAMLKVIFKKAI 345 >gi|227534733|ref|ZP_03964782.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187489|gb|EEI67556.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 399 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 17/329 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F P+LSA + + PI + K S ++ + V+ ++ Sbjct: 39 FLFAPVATFFSTLLIPILSAGFLFYLFNPI-VKLLQKFHISRNISILLIFLVVIGALVLV 97 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS--DIPGGMWASELWTKHLSHP---QS 132 + + + ++ + V+ + P +L + + W + L+ S Sbjct: 98 FMAVLPNLIYQVTQFVTNI----------PDFLKGVRLFISKASHYTWYQRLNIGKYVAS 147 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L+I L F + G + +SII + + LF+F +DG + + + Sbjct: 148 LQISPSKVLSKVLGGFSTGLPTVIGSVA-SMMISIITIPVMLFYFLKDGENFVPSIQKML 206 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 H + + + + G I + G Y + G+P LG I I+ Sbjct: 207 PHRYHEEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVT 266 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP P A ++ + + + I + P ++G + + L Sbjct: 267 IIPYLGPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTI 326 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ GLLG + A+I + Sbjct: 327 IILLMVAGNLWGLLGTILAVPTYAVIKTV 355 >gi|262044145|ref|ZP_06017219.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038517|gb|EEW39714.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 137 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 ++GVP L V+ ++ G + I+L G+ T L +W + +D Sbjct: 1 AVSGVPYAALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSC-VVGTMD 59 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 60 NVIRPVLIRMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 114 >gi|227548170|ref|ZP_03978219.1| membrane protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079731|gb|EEI17694.1| membrane protein [Corynebacterium lipophiloflavum DSM 44291] Length = 468 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 63/344 (18%), Positives = 114/344 (33%), Gaps = 20/344 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESST 60 M + + II V LY L PV+ A+I+ PI + S Sbjct: 37 KSAAMTVLRILIICVFLYALSRLIGTFWQGILPVILAIIVCTVLAPIAGFLRRRAHFPSA 96 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+I+ + L + + + L + Q + WL P M Sbjct: 97 LAALISLLIFFGLIGTLVFLIAPDIAAHSRVLYLQAFEGIQR---LQLWLQGPPINMDPD 153 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L ++ + T D + G+I + ++ F +D Sbjct: 154 DL----NEAVNTVAQWLQNQAGTIAGDVFAGIGTAAGLIVTLTVVLVLTFF-----FLKD 204 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + ++ + I+++ + +G WL GVP Sbjct: 205 GPRFLPWLRATAGGRPGLHATELLTRAWNTLSGFIRAQAIVSLVDAFFIGVGIWLVGVPM 264 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L VIT I IP + A+++ L+ A + L + L P Sbjct: 265 AFTLSVITFIAGFIPIVGAVVAGALAVLIALVSLGFTEAIIVLLIVLAVQQLEGNVLSPV 324 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + + G GL+G F+ + A+IAV+++ Sbjct: 325 LQSKAMDLHPVIVLVSVTIGGGLFGLVGAFLAVPVAAMIAVVFR 368 >gi|110668328|ref|YP_658139.1| permease [Haloquadratum walsbyi DSM 16790] gi|109626075|emb|CAJ52526.1| predicted transporter (predicted permease) [Haloquadratum walsbyi DSM 16790] Length = 417 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 131/356 (36%), Gaps = 32/356 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M ++ + W+I F + +L + + F ++ L + + P+Y + Sbjct: 1 MSSRTIDRTQLAWWVIGFALAGALIFVVYSFIGTIVFGLFFYYATRPLYQRINRQIGP-P 59 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + A IA + + + +L+ E+ +L ++ ++ + L+ I Sbjct: 60 SLAAAIALLLLALPAFLLVLYTAAIAANELIKLTNQTLVQLVDSPITSQQLAQITDIERL 119 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ L+ Q ++ S A F + + + MI F+ R Sbjct: 120 IQIELTQLTPDQIRRVFSS-----------LGSAGNFLSVIGVGLVHLFVMIALAFYLLR 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG-- 237 D +S+ + S + V S F G + A+ G + AY + Sbjct: 169 DDHQLSRWVRSRFGDERGVL-ETYLDAVDNDFTSIFFGNILNAVITGTIGVLAYSILNIT 227 Query: 238 ------VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN-------IFNATCLFL 283 +P+ LG++ + ++IP G + + V++YL + F A+ + + Sbjct: 228 APAGVAIPAAALLGLVAGVASLIPVVGMKLVYVPVAVYLAVTSYFTNPETLWFTASFVAV 287 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I I D LRP++ G +L G G G+F+ P+++ L+ Sbjct: 288 SLIIVDTIPDLVLRPYVSGR--RLHVGAVMVAYTFGPLLFGWYGVFLAPIILVLVV 341 >gi|81428086|ref|YP_395085.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K] gi|78609727|emb|CAI54773.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K] Length = 379 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 110/320 (34%), Gaps = 6/320 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A ++ + P+ + + + + ++ L + + + L Sbjct: 59 PIIIAAVLYYLINPLIDWLEHRWHLNRVLSITLIFIVIVALLAWGVATIIPIIQSQTTSL 118 Query: 93 V-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + W +D P + + S + T+ + I Sbjct: 119 IKQWPSYWANIQKQTMSWFND-PSFKSLQKQLDDINTDMLSNLSGKVNKMLTSTVTHIGT 177 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + + ++I+ M LFF +DG + L ++ + + Sbjct: 178 AVG----VVTNIVIAIVTMPFILFFMLKDGHRLKGYLVKFFPVRIRETTSQVLEEINGQV 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 G +A ++ YW+ G+ + LG++ ++ +IP S+ + Sbjct: 234 SQYIRGQLTVAFWVAVMFTIGYWIVGMKYGLTLGILAGLLNLIPYLGSFLALVPSVVIAA 293 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + L A+E + + + P ++G + + + T L+ + GL+G+ +G Sbjct: 294 FISPILLIKVLLVFAVEQTLEGRVVSPLVLGSKMSMYPVTTIIVLLASGKLFGLVGVIVG 353 Query: 332 PVLMALIAVIWKESIMAIKE 351 + A+I ++ K+ Sbjct: 354 IPVYAIIKILVTHLFEWFKK 373 >gi|320532667|ref|ZP_08033462.1| hypothetical protein HMPREF9057_01338 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135113|gb|EFW27266.1| hypothetical protein HMPREF9057_01338 [Actinomyces sp. oral taxon 171 str. F0337] Length = 486 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 121/343 (35%), Gaps = 19/343 (5%) Query: 10 GIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFL 62 G+ W+ + I++ + F + AL+ P+ + F TFL Sbjct: 135 GMGAWLGLGIVIAIGLVVYATSQVIPVFIGLFMALVFTSILQPMVNLFARIMPRYPATFL 194 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ T+ + + ++ + L S+ + +L + P + ++ Sbjct: 195 ALLTTIGAIAGLV---TYVVTSVTSQWSSLASQFGDGLNT---IMEFLENGPLHLTQQQI 248 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + Q + +L++N S +D + + FF G Sbjct: 249 YHQF----QLWLRQGQHYLQSNAPSLASELLSN-ASAVVDVLTVLALALFVTIFFLASGG 303 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + + + G ++A+ + ++ G L G+P Sbjct: 304 RMWRWFLNELPATMRESTHRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLVGIPLAA 363 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I A IP GAP++ + L G + + A I L+P ++ Sbjct: 364 PLAVLVFIGAFIPIIGAPLAMIVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIM 423 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L + G+ G GLLG + L++++ ++ E Sbjct: 424 GRQVSLHPVVVIIGVALGTYAAGLLGAIVAVPLISVLWSVYSE 466 >gi|291276358|ref|YP_003516130.1| acid membrane antigen A [Helicobacter mustelae 12198] gi|290963552|emb|CBG39384.1| acid membrane antigen A [Helicobacter mustelae 12198] Length = 345 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 142/361 (39%), Gaps = 33/361 (9%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I+ + I L +LY + F L A +I ++ + + S LA Sbjct: 2 TNSKSLILIILFACITLSTLYLYRFFLVDALIAGLICIATFGLKERLYNIL--RSNLLAT 59 Query: 65 IAT-VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + +M F++PL+FL ++ L ++ +L + E Sbjct: 60 LSIEIFLMLFFVLPLVFLIQQSIMFFSALKAQDILYYFQS---------------SREGI 104 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIP----RFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + LS+ + +T L+ I +S G L + + + F+++ LF F+ Sbjct: 105 KEILSNFPMITAHIQTLLQNLSAQKIAELSLSVSSYIGSESLHFFMDLGFILLFLFLFFY 164 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G SI + L I V V++ L + I +GL G Sbjct: 165 HGRSIYLGILRALP-LNIKQGHHIFEEVSSVLKIVLLTSLVNMILQGLAFGIFLSFFHYK 223 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLR 297 + LG+ I +++P G + + V+ + + G+ +A + L+ I + F++D ++ Sbjct: 224 HALILGICYGIASLVPVVGGALVWIPVAGFEIFLGHFQHAIIISLYALIFIAFVIDNVIK 283 Query: 298 PF--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P L+ P+K+ L FF + G T G G+ +GP + A +W+ Sbjct: 284 PIIITFFNHKLLSKPLKINELIIFFAIFAGFSTFGFWGILLGPAITAFFIALWRLYQRRF 343 Query: 350 K 350 K Sbjct: 344 K 344 >gi|34558124|ref|NP_907939.1| membrane protein- permease [Wolinella succinogenes DSM 1740] gi|34483842|emb|CAE10839.1| MEMBRANE PROTEIN-Predicted permease [Wolinella succinogenes] Length = 345 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 128/359 (35%), Gaps = 24/359 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + +F + LY K F +L A ++ + + + + L+ + Sbjct: 1 MRPIHFFWILFVFSLYWMLYLFKPFLMDMLVAGLLCIATTSLKERIEKRVK-----LSWL 55 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A++ V+ L + L +Y + + +SK+ + G + Sbjct: 56 ASLLVVVLLLSLLFVPLFYVAAVLADTLSKIDPDSFRGFVESS-------KAQMFKWMAL 108 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + + + ++ G L + +F+ I LF F+ G + Sbjct: 109 FPFAQEKLMENLDKINASAILQHALAWSGALGKKSLSFVTDTVFVTIFLFLFFYYGRAFY 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ V V+ F I +G + G + G Sbjct: 169 DYALRLIP-FSRRESHQLFGEVAGVLGVVFYSSLASVILQGFLFAVMIAFLGY-NGFLFG 226 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG- 302 V+ + +++P G + + ++ Y GN N+ + L+ I + V D ++P L+G Sbjct: 227 VLYGVASLVPVVGGLLVWLPLASYEYYLGNTGNSLLIALYSMIVIATVADNVIKPLLIGL 286 Query: 303 -------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P+++ L FF + G+ T G G+ +GP + A + + +E Sbjct: 287 INRVILKNPVQINELVIFFAIFAGLTTFGFWGMVLGPTITAFFIALLRLYERGFLHIQE 345 >gi|325294630|ref|YP_004281144.1| hypothetical protein Dester_0431 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065078|gb|ADY73085.1| protein of unknown function UPF0118 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 346 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 119/336 (35%), Gaps = 7/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+++ L+ +K P I + S+P+++ F + + A++ S+ + I+ Sbjct: 14 IFLLIFFLFSMKTAIMPFFIGSAIAYLSYPLFNLFRKLTKNRTNISAILTLFSIFLVLII 73 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + +++ + + + G + S Q+L Sbjct: 74 VLFIVLPTVISQVQSFIKFLPELTKKLDAFTYKF----VGEHLLKKLHFDTSTLQTLVRS 129 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L + + I + ++++ + + ++F + I + Sbjct: 130 AYIQLGSLPVRDIVQRFFSGVFSVFTLFINVVIVPLITYYFLVNAGKIRDIYLKITPVSI 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 K + V + + S +G +A G + + G+ +G + ++ MIP Sbjct: 190 RDELKSLLEKVHESLSSYLIGQIAVATFVGFYIALGLYFVGIKYSFLIGFVAGVLNMIPY 249 Query: 257 GAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 S SI L I G + + + E+ ++ + P ++ + L Sbjct: 250 VGFFSGLIPSILLAIFDNGQLTYVIGVLIVFLTEVG-IENLIYPVVMSKTTGINPLLILL 308 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G G LG+ I + +I I++ + + Sbjct: 309 SIFIGGYYGGFLGIIISVPIAVMIVPIFESFLEKRE 344 >gi|284033514|ref|YP_003383445.1| hypothetical protein Kfla_5640 [Kribbella flavida DSM 17836] gi|283812807|gb|ADB34646.1| protein of unknown function UPF0118 [Kribbella flavida DSM 17836] Length = 470 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 105/326 (32%), Gaps = 16/326 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ +L +L PV +++ P+ + + A + + + Sbjct: 126 VLVLAYALRYLSEVVVPVTIGVLLTALLVPVTNGLQKIRVPR-GPAAGGTVLLTLVVVAG 184 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + L ++V + + R ++S L Sbjct: 185 LLTLVGAQIATQFENLSTQVGEGVRELRDMAR--------------INLNVSDADITDAL 230 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + A+ G + + LFFF G I L L Sbjct: 231 NRLRDTVMSGGAIGQRAAEVGTTATHVVAGLFISLFCLFFFLYQGEQIWAWLVRLFPRQA 290 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 R + + I+A + + + + G+P A+G++ + A +P Sbjct: 291 REKADSSGRKAWVSLTAFVRATIIVAAVDAIGIALGAAILGLPLVSAIGILVFVGAFVPV 350 Query: 257 GAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + V++ + L+ A + + L+PFL+G + + L Sbjct: 351 VGALVSGCVAVLVALVAKGPIVAVIMLAVVIGVQQLEAHVLQPFLLGRAVSVHPLAVILA 410 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 + GV G++G + A+I I Sbjct: 411 IATGVVIAGIVGALVAVPTAAVINTI 436 >gi|296108736|ref|YP_003615685.1| protein of unknown function UPF0118 [Methanocaldococcus infernus ME] gi|295433550|gb|ADG12721.1| protein of unknown function UPF0118 [Methanocaldococcus infernus ME] Length = 326 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 134/332 (40%), Gaps = 25/332 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ I+ ++L +Y + + A+ + + PIY F + +++ + Sbjct: 10 IKLFILGLMLFFVYMIIPYLDVFAYAIAFSYMALPIYKFL------RKFFSSSVSSFLAI 63 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 LFIVPL+ +F Y + + +L+ + DI + + +L + Sbjct: 64 ALFIVPLILIFIYSISVLIKLILSL---------------DINYYINLLLKYNINLEYLS 108 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L ++ T I + + D L +I ++ ++F +DG I + + Sbjct: 109 KLLPEYFKYINTYLSSLISSIPEKI-LYLSDLALKLIMVVFCTYYFLKDGEKIKDVILKI 167 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + + ++ +S F+ +++ G + Y+L +P L V+TAI Sbjct: 168 TPTEYEYKVEILLKYLHEIYKSLFISCLFLSVIIGFLAFIIYYLFSIPYPELLAVLTAIF 227 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A +P GA I + S+Y+ + I L L I D LRP +V + + Sbjct: 228 AFLPIIGAWIIYLPASLYIALANPIKGLFFLILCIVFLNIIPDYILRPHIVS--TDIHPI 285 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + T+GL G IGP+++ + + Sbjct: 286 LVVIAFLIAPLTLGLAGFAIGPLIVGFLNAFY 317 >gi|116495246|ref|YP_806980.1| permease [Lactobacillus casei ATCC 334] gi|116105396|gb|ABJ70538.1| Predicted permease [Lactobacillus casei ATCC 334] Length = 392 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 17/329 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F P+LSA + + PI + K S ++ + V+ ++ Sbjct: 32 FLFAPVATFFSTLLIPILSAGFLFYLFNPI-VKLLQKFHISRNISILLIFLVVIGALVLV 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS--DIPGGMWASELWTKHLSHP---QS 132 + + + ++ + V+ + P +L + + W + L+ S Sbjct: 91 FMAVLPNLIYQVTQFVTNI----------PDFLKGVRLFISKASHYTWYQRLNIGKYVAS 140 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L+I L F + G + +SII + + LF+F +DG + + + Sbjct: 141 LQISPSKVLSKVLGGFSTGLPTVIGSVA-SMMISIITIPVMLFYFLKDGENFVPSIQKML 199 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 H + + + + G I + G Y + G+P LG I I+ Sbjct: 200 PHRYHEEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVT 259 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP P A ++ + + + I + P ++G + + L Sbjct: 260 IIPYLGPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTI 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ GLLG + A+I + Sbjct: 320 IILLMVAGNLWGLLGTILAVPTYAVIKTV 348 >gi|229012172|ref|ZP_04169351.1| hypothetical protein bmyco0001_26180 [Bacillus mycoides DSM 2048] gi|228749260|gb|EEL99106.1| hypothetical protein bmyco0001_26180 [Bacillus mycoides DSM 2048] Length = 348 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 128/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPLLVFLENKKVPR-GLAILLLYLFIITLTGVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK Sbjct: 81 SQQLMDLVKNMPTYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLKEIP 137 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + FG+I + L I + LF+ ++DG + + S+ + +I + Sbjct: 138 NTLTSSATALFGIIT-NVALVIFTVPFILFYMFKDGHAFPGKAVSVLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G + Y + G+P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + K Sbjct: 317 IGMILAVPAYAVTKTVVSNLVRLFKTKRSK 346 >gi|314939808|ref|ZP_07847028.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314943896|ref|ZP_07850622.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314949993|ref|ZP_07853286.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314953515|ref|ZP_07856427.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314994283|ref|ZP_07859585.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314995151|ref|ZP_07860267.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313590642|gb|EFR69487.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313591318|gb|EFR70163.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594438|gb|EFR73283.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597437|gb|EFR76282.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313640948|gb|EFS05528.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313643640|gb|EFS08220.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 362 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 115/334 (34%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 30 FFSTLFAPVLIAGFLYYLLNPI-VKLLMKAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 89 VQQISSLASNMPDFIKQVESWLKEVAELPLFKEVD------INKYFEQLDISYGTIIQQF 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 143 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 203 QLNKTLANYISGQAIECLFVGTFTFLGYMVIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A + I + + P ++G +K+ L L+ GL Sbjct: 263 AFLVTVFNDPVKALLCCVVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 322 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +KE+K+ + Sbjct: 323 LGIFLGVPFYAICKTIISYIIKIVKEDKQNENKK 356 >gi|191638756|ref|YP_001987922.1| UPF0118 membrane protein yueF [Lactobacillus casei BL23] gi|301066810|ref|YP_003788833.1| putative permease [Lactobacillus casei str. Zhang] gi|190713058|emb|CAQ67064.1| UPF0118 membrane protein yueF [Lactobacillus casei BL23] gi|300439217|gb|ADK18983.1| Predicted permease [Lactobacillus casei str. Zhang] gi|327382798|gb|AEA54274.1| YueF [Lactobacillus casei LC2W] gi|327385985|gb|AEA57459.1| YueF [Lactobacillus casei BD-II] Length = 392 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 113/324 (34%), Gaps = 7/324 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F P+LSA + + PI + K S ++ + V+ ++ Sbjct: 32 FLFAPVATFFSTLLIPILSAGFLFYLFNPI-VKLLQKFHISRNISILLIFLVVIGALVLV 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ + V+ + + V ++S W L + SL+I Sbjct: 91 FMAVLPNLIYQVTQFVTNIPDFLKG---VRSFISKASHYTWYQRL--NIGKYVASLQISP 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L F + G + +SII + + LF+F +DG + + + H + Sbjct: 146 SKVLSKVLGGFSTGLPTVIGSVA-SMMISIITIPVMLFYFLKDGENFVPSIQKMLPHRYH 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + G I + G Y + G+P LG I I+ +IP Sbjct: 205 EEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVTIIPYL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + + I + P ++G + + L L+ Sbjct: 265 GPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIILLM 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 GLLG + A+I + Sbjct: 325 VAGNLWGLLGTILAVPTYAVIKTV 348 >gi|172040204|ref|YP_001799918.1| hypothetical protein cur_0524 [Corynebacterium urealyticum DSM 7109] gi|171851508|emb|CAQ04484.1| hypothetical protein cu0524 [Corynebacterium urealyticum DSM 7109] Length = 421 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 115/314 (36%), Gaps = 13/314 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 AP+ A++ P+ + K + +++ + ++ L + + + Sbjct: 54 VAPLAIAVLFSAMLTPVVNFLDVKLRLPRSLASLLTVLGLIGLISAGITLFTTQLISGVP 113 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + A Q + WL + P + ++L +L S+T I Sbjct: 114 AMRD---SARQGVNQIVDWLENGPFKLTQAKLSEMVSHVQGALSENSKT---------IA 161 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A R G ++ +++ +I LFFF +G I L SL + R Sbjct: 162 DGAVRTGTTAVNSGAALLIFLITLFFFLYEGRRIWLWLVSLAPQASQVPMDEAFRRGWVS 221 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV-SIYL 269 + + ++A + +G W+ VP + + V+ I + +P + AV ++ Sbjct: 222 LGTFAHVQVLVAALNAVSVGIGCWVMKVPFAIPISVLVFIASFVPIVGALISGAVPALIG 281 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ +F A + + I L+PFL+G + L L + G GL G Sbjct: 282 LVDQGVFTAIVMVIIVTAVHQIETHVLQPFLMGHAVALHPLAVIVVVAAGTYLFGLAGAV 341 Query: 330 IGPVLMALIAVIWK 343 + AL+ + + Sbjct: 342 FAVPVAALVNSVVR 355 >gi|312138760|ref|YP_004006096.1| integral membrane protein [Rhodococcus equi 103S] gi|311888099|emb|CBH47411.1| putative integral membrane protein [Rhodococcus equi 103S] Length = 413 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 17/321 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ IL L+ + PV+ A+++ WP + + A I + Sbjct: 40 AIGALVVGWILQKLWVIA---LPVMLAIVVSTVLWPPTRALTKR-GVPPAGAASITLLIF 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF + + + + EL +K Q V WL P + ++ T + Sbjct: 96 FALFGGVVALIVPSVVDQAPELANKATQGIQ---QVQDWLKGPPVNLQDDQIDTAVHAIT 152 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ I +++ ++I FFF +DG L Sbjct: 153 SKLQESGTA---------IASGVFTGVTTAGSMVVTLFLVLILAFFFVKDGPRFIPWLHG 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ + + ++++ + + +G+ + GVP L ++T I Sbjct: 204 VSGGRAGRHLEEVLGRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFI 263 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P GA ++ + L+ + A + I L+P L +KL Sbjct: 264 GGFVPIVGAFVAGALAVLVALVANGLTTALIVLAIIIAVQQIEGNVLQPVLQSKSMKLHA 323 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + + G G++G F+ Sbjct: 324 VVVLLAVTAGSSLFGIVGAFL 344 >gi|326773454|ref|ZP_08232737.1| permease [Actinomyces viscosus C505] gi|326636684|gb|EGE37587.1| permease [Actinomyces viscosus C505] Length = 485 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 112/318 (35%), Gaps = 13/318 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFLAVIATVSVMCLFIVPLLFLFYYGML 87 F + AL+ P+ + F TFLA++ T+ + + ++ Sbjct: 159 PVFIGLFMALVFTSILQPMVNLFAKIMPRYPATFLALLTTIGAIAGLV---TYVVTSVTS 215 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + L S+ + +L + P + +++ + Q + +L++N Sbjct: 216 QWSSLASQFGDGLNT---IMDFLENGPLHLTQQQIYHQL----QLWLRQGQHYLQSNAPS 268 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 S +D + + FF G + + + + + Sbjct: 269 LASELLSN-ASAVIDVLTVLALALFVTIFFLASGGRMWRWFLNELPATMRESTHRAAGAG 327 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 G ++A+ + ++ G L G+P L V+ I A IP GAP++ Sbjct: 328 WYTFAGYARGTVLVALTDAIMAGIFLQLVGIPLAAPLAVLVFIGAFIPIIGAPLAMLVAM 387 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L G + + A I L+P ++G + L + G+ G GLL Sbjct: 388 VVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIMGRQVSLHPVVVIIGVALGTYAAGLL 447 Query: 327 GLFIGPVLMALIAVIWKE 344 G + L++++ ++ E Sbjct: 448 GAIVAVPLISVLWSVYSE 465 >gi|219851885|ref|YP_002466317.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219546144|gb|ACL16594.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 345 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 138/354 (38%), Gaps = 22/354 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T++ + + +I I LV+++ ++ A+ + P+ + + Sbjct: 4 MEITLITEEQKLWLLISAIFLVAVFAFWPLMTVIVWAVALAVAFMPLQKRLSRRL--KPS 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + T+ ++C I+ + + E+ S ++ + G+ + Sbjct: 62 ISAALITIMILCTVILVVSVSMNVLLANSGEIGSM--------------ITSLVMGIQNA 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + S S L + ++ I S + + + + + + L+F Sbjct: 108 GISSFLPSSIASQLSSIPQMLIKSMLESIIGMTSNLLQLLIQVVIFFLSLSMLLYF---- 163 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G SI L + +K++RI I S + AI ++ + + G + Sbjct: 164 GESIWGTLTCNLSPKLASAVEKMARISGDTIYSLIIIQISAAILSFILAIPFFMVLGYGN 223 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRP 298 + I + +IP GA +++YL+ G++ A +F+ + +D RP Sbjct: 224 VILFATIIGLGMLIPLIGAQFIILLMTLYLIATGDMKGAAITVFIGYPLLSGWIDFYYRP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G + + + G+ G+ MG+LG +GPVL+AL+ +K ++ Sbjct: 284 VMMGKRVAINPVLMMIGIFAGLPFMGILGFIVGPVLVALVVTGYKILEEEMRNP 337 >gi|148508155|gb|ABQ75947.1| predicted transporter [uncultured haloarchaeon] Length = 417 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 131/356 (36%), Gaps = 32/356 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M ++ + W+I F + +L + + F ++ L + + P+Y + Sbjct: 1 MSSRTIDRTQLAWWVIGFALAGALIFVVYSFIGTIVFGLFFYYATRPLYQRINRQIGP-P 59 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + A IA + + + +L+ E+ +L ++ ++ + L+ I Sbjct: 60 SLAAAIALLLLALPAFLLVLYTAAIAANELIKLTNQTLVQLVDSPITSQQLAQITDIERL 119 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ L+ Q ++ S A F + + + MI F+ R Sbjct: 120 IQIELTQLTPDQIRRVFSS-----------LGSAGNFLSVIGVGLVHLFVMIALAFYLLR 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG-- 237 D +S+ + S + V S F G + A+ G + AY + Sbjct: 169 DDHQLSRWVRSRFGDERGVL-ETYLDAVDNDFTSIFFGNILNAVITGTIGVLAYSILNIT 227 Query: 238 ------VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN-------IFNATCLFL 283 +P+ LG++ + ++IP G + + V++YL + F A+ + + Sbjct: 228 APAGVAIPAAALLGLVAGVASLIPVVGMKLVYVPVAVYLAVTSYFTNPETLWFTASFVAV 287 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I I D LRP++ G +L G G G+F+ P+++ L+ Sbjct: 288 SLIIVDTIPDLVLRPYVSGR--RLHVGAVMVAYTFGPLLFGWYGVFLAPIILVLVV 341 >gi|253575325|ref|ZP_04852663.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845322|gb|EES73332.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 397 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 111/332 (33%), Gaps = 11/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 K P+L I + P+ +K+ V + L L L Sbjct: 50 LFKTVLLPILLTGAIYYLLNPLVDWLETKRIRR-----VYTITGLYLLIAGILTVLIMTV 104 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++++ ++ + + S + + L G Sbjct: 105 IPLVQ---AQILSLIENLPRYTSEVQRQFESLIGSNFFHQVQESTGFNLDDLSNTLSERG 161 Query: 146 IDFIPRFASRFGMIFL---DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + S G + L+II M LF+ +DG + + + F Sbjct: 162 TALLNNAWSGIGGFLGAVKNVVLAIITMPFILFYLLKDGKKLPEFILRYVPVRFREQTHH 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + I S G I++ G ++ + + G+ + L +I + +++P P Sbjct: 222 VMTEMNSQISSYIRGQIIVSFCIGALMYVGFVIIGLDYSLTLAIIASFTSVVPYLGPAIA 281 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I + I + L + + + K + P ++G +++ + F ++ Sbjct: 282 ITPAIIVAIVTSPIMLLKLIVVWTVVQLVEGKFISPQIMGKTLRIHPITIIFVILTAGNL 341 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+LG+ + A++ VI+ + Sbjct: 342 FGVLGVILAVPGYAVLKVIFTHLFQWFERRSH 373 >gi|229060593|ref|ZP_04197952.1| hypothetical protein bcere0026_26890 [Bacillus cereus AH603] gi|229167645|ref|ZP_04295381.1| hypothetical protein bcere0007_26070 [Bacillus cereus AH621] gi|228615807|gb|EEK72896.1| hypothetical protein bcere0007_26070 [Bacillus cereus AH621] gi|228718705|gb|EEL70331.1| hypothetical protein bcere0026_26890 [Bacillus cereus AH603] Length = 348 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 128/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLENKKVPR-GLAILLLYLFIITLTGVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK Sbjct: 81 SQQLMDLVKNMPTYIKEG---KVYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLKEIP 137 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + FG+I + L I + LF+ ++DG + + S+ + +I + Sbjct: 138 NTLTSSATALFGIIT-NVALVIFTVPFILFYMFKDGHAFPGKAVSVLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G + Y + G+P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + K Sbjct: 317 IGMILAVPAYAVTKTVVSNLVRLFKTKRSK 346 >gi|294497307|ref|YP_003561007.1| hypothetical protein BMQ_0516 [Bacillus megaterium QM B1551] gi|294347244|gb|ADE67573.1| Conserved Hypothetical Protein [Bacillus megaterium QM B1551] Length = 380 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 126/327 (38%), Gaps = 7/327 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI++ F+K P++ A I + P+ K + +I+ + + + I Sbjct: 40 IGFILIPISIFIKTIALPIILAGICFYLFNPLVDFLERKGVKR-----IISILVLYIVII 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L + + +K V +++ V ++++ + + + L Sbjct: 95 GALAIIISSVIPPLKNQVDRLIDNIPELTHDVQHAVTNLSNNRYVEQGLQSANTDLDKLS 154 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L F + G I + LS+ + LF+ +DG ++ + L + Sbjct: 155 KDASKHLSKYVSGFSSGIVNFVGTIT-EIILSVAVLPFILFYLLKDGKNLPNYIVKLLPN 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I + + + G +AI G++L Y + G+ + L +I + ++ Sbjct: 214 RSRSEAKFILADMNHALSAYIRGQIFVAICIGVLLFIGYLIIGLDYALLLAIIAMVTNVV 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI +I + + F L + A+ + K + P ++G + + + F Sbjct: 274 PYLGPIIAIIPAIIIAFITSPFMLVKLAIVWAVVQLLEGKVISPQIMGRSLDIHPITVIF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ VI Sbjct: 334 VILTAGNLFGIIGIILAVPGYAVLKVI 360 >gi|295395792|ref|ZP_06805980.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971327|gb|EFG47214.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 465 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 100/292 (34%), Gaps = 9/292 (3%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F+ + + T + + + + + L F ++ L +VVL + ++ Sbjct: 119 FLDRHKWPHTLSVITTFLGFILVVLGLLAFTGQQIVVGFPALAHQVVLGVNK---LNAFV 175 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P G+ ++ + + + I A ++ ++ Sbjct: 176 QNNPFGIDSTVITSYLDELSGKALDWLQK-----SQGKIASGALGAASSIGNFVTGLLIT 230 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + A FFF DG I Q L + + ++A + + +G Sbjct: 231 LFASFFFLYDGGRIFQWFVRLLPKPAQPKSVAAAVNGWSTLVQYVRVQVLVAGIDAVGIG 290 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + G+P L V+ + + IP GA ++ + L+ + A + + Sbjct: 291 IGAFALGIPLAFPLTVLVFLASFIPLVGAVLTGVIAVLVALVSKGLVTAIIMLIVVVGVQ 350 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+PFL+G + + L + GG G+ G +A++ + Sbjct: 351 QLEGNVLQPFLMGKAVAVHPLAVVLAVTGGGVLYGIPGALFAVPFVAMLNTV 402 >gi|163756542|ref|ZP_02163654.1| permease [Kordia algicida OT-1] gi|161323436|gb|EDP94773.1| permease [Kordia algicida OT-1] Length = 381 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 123/346 (35%), Gaps = 6/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ LY LK P+L A+I+G +P+ F K S Sbjct: 1 MTIQTKTTSRAVGLFTVIAVVFVLYVLKPLVMPLLFAMILGVMIFPVQQFFEKKWRCSRM 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + + + + ++ L +F+ V ++ +L D + Sbjct: 61 FATIFSIFLIFSVTVILLFIIFFQLQEFTNGSEDYVGRISELYENTVAYLGDAFNMSNSK 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + S + L D I +R G + ++ + I LFFF Sbjct: 121 TVEGVDNTESSSGVDFNLNNLLKGNFDKITSLLTRSG----SFMSDLVLVPIYLFFFLYY 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L +H ++ K+ + V ++ G+ + + G++ G+ + Sbjct: 177 RRFLRTFAYKLFKHKSQSFVNKMINKIYNVQQNYLAGLLKVMLIVGVLNTITLLALGIEN 236 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G AI+ +IP I + L+ K +I+ A + + F+ + P Sbjct: 237 AIFFGFFAAILLLIPYIGVIIGALLPAMVALVTKDSIWYAFGVIGFFGFIQFLEGNFITP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G + + L+ G+ G+ + ++A + +I+ Sbjct: 297 KITGSKVNMNSFVAILSLIAFAMLWGISGMIVALPIIASLKIIFDH 342 >gi|145295169|ref|YP_001137990.1| hypothetical protein cgR_1111 [Corynebacterium glutamicum R] gi|140845089|dbj|BAF54088.1| hypothetical protein [Corynebacterium glutamicum R] Length = 490 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 19/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF---APVLSALIIG-FTSWPIYSSFISKKEESSTFLAVI 65 + + + + + + F+ PV A+II S P +S++ K S A I Sbjct: 64 SLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSP--NSWLRKHGVPSVLSAFI 121 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + + + L + + + WL P + + +L Sbjct: 122 TIGTFFAITGAILWVIAPSIAQQSQVLYFQAFEGI---LSIQLWLQGPPLNLDSGDLSRY 178 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ + + + + FFF +DG Sbjct: 179 FNEAAAWLQNQAGAIAGEIFSGLGAATSVLVTLGVVLVLT---------FFFLKDGHRFL 229 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +G + ++ + +++ + + +G + GVP +AL Sbjct: 230 PWARKIGGEQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALS 289 Query: 246 VITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT + IP + A+++ + L+ A + + + L P L Sbjct: 290 VITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLLQSKA 349 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + + G G++G F+ + A+IAV ++ Sbjct: 350 MNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFR 388 >gi|229823123|ref|ZP_04449192.1| hypothetical protein GCWU000282_00420 [Catonella morbi ATCC 51271] gi|229787289|gb|EEP23403.1| hypothetical protein GCWU000282_00420 [Catonella morbi ATCC 51271] Length = 401 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 126/328 (38%), Gaps = 20/328 (6%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++++ ++ + +P+ ++ + I ++ + + ++ Sbjct: 59 PIITSGVLYYLLYPLVDRLQARGMNRQWAIWAIFIGLILL-----SAWGIASLVPTLQTQ 113 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + +P++ +I ++ S T++ Q L+ + F + + + RF Sbjct: 114 ILSFARS------LPKYYDEIYHMLYQSPFLTENKEVTQRLQSFLDGFDFRSMAEQLSRF 167 Query: 153 ASR-------FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 AS + ++ + I L++ DG + + A ++ Sbjct: 168 ASSTFGSLGSVVGAVTSVIMGLLTVPIILYYLLADGQRLGDYILKFVPTKHRAMASRMMY 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + G I+AI ++ Y + G+ +ALGV++ + +IP G+ I+ Sbjct: 228 QGHYQVAQYIRGQIIVAICVAIMFSIGYSIVGLDYAIALGVVSGFLNIIPFLGSFIAVIP 287 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I LI + + + +E I + + P ++G +K+ + L+ + G Sbjct: 288 AFIIALIT-SPVMVLKVAIVMMVEQTIEGRFIAPQVLGNNLKIHPVTILIVLLSAGKAFG 346 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G+ +G A+I VI E +E Sbjct: 347 LVGVILGVPGYAVIKVIVGEFYELYRER 374 >gi|257784261|ref|YP_003179478.1| hypothetical protein Apar_0456 [Atopobium parvulum DSM 20469] gi|257472768|gb|ACV50887.1| protein of unknown function UPF0118 [Atopobium parvulum DSM 20469] Length = 460 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 121/333 (36%), Gaps = 14/333 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCL 73 + + L L L + I+ F P+ + + S F A+I T+ V Sbjct: 31 LFALALYVLGILGQAVELLAIGAIVAFVCSPVTNWLEDRGIPRGISAFAALILTLIVFVG 90 Query: 74 FIV----PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 F++ PL+ + S++ + S+ + + S Sbjct: 91 FLILIAQPLVLELTTLLKNAPSYASQIGAMAREFWQNFDSQSNPAVRQTVELVIERASSI 150 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S+ ++L T+ + I A++ + ++ ++ +D I ++L Sbjct: 151 GISVASGILSWLSTSALGNISSMANQ--------LMVFFLGLVLAYWLAKDYPVIVRELA 202 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + ++ I I+ + G I + G+++ + G P +G++T Sbjct: 203 IIAGPQKEDEFRLILAILSRSTSGYMRGTIITSAVNGILVYFGCLILGNPYAALIGMVTG 262 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I +IP P+ +++ L I + + + +VD L P ++ +K+ Sbjct: 263 IFHIIPVVGPVFSAGIALILSILVDPIMTVWTIVILMVAQNVVDNVLSPLVMATSVKVHP 322 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G+V G G++G + L A + I+ Sbjct: 323 GLSLIGIVIGSALGGVVGTILAIPLTAALRGIF 355 >gi|224438291|ref|ZP_03659218.1| hypothetical protein HcinC1_09901 [Helicobacter cinaedi CCUG 18818] gi|313144731|ref|ZP_07806924.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129762|gb|EFR47379.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 355 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 137/343 (39%), Gaps = 25/343 (7%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 W++ + S+Y + +L AL++ ++ +Y+S + + + A ++ ++ Sbjct: 8 WLVFIVSAYSMYHIYAAYLMDILIALLLYIVTYGLYASLLKRVK-YPIVSATLSICVLIL 66 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L +VPL FLF + EL A G L Sbjct: 67 LLVVPLFFLFKTIITSAAELNPTDFSAFVEG-----------SKEQILSLLVSFPEIEAK 115 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + ++ + ++ F+S+ G L + + F+I+ LFF++ G + L Sbjct: 116 ARDILSSISASSILGYVLNFSSQLGKSSLGFMVDTGFIIVFLFFYFLYGKQAYDYVIELI 175 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + V VI+ F + + +G+ G G V G++ + Sbjct: 176 P-FENIQISNVLDEVTNVIKVVFYTSLVNIVLQGVAFGILIMFFGYDG-VFFGMLYGFAS 233 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG-------- 302 ++P G + + ++ Y GN NA + L+ I ++D ++P L+G Sbjct: 234 IVPIVGGGLVWLPLAGYEFYLGNTQNAIIIALYALIVCAVLIDNVIKPILIGLINKKVLK 293 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +++ L FF ++ G+ ++G G+ +GP + AL + + Sbjct: 294 TSVRINELLIFFAILAGLTSIGFWGIILGPAITALFISLLRIY 336 >gi|32266134|ref|NP_860166.1| hypothetical protein HH0635 [Helicobacter hepaticus ATCC 51449] gi|32262184|gb|AAP77232.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 355 Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 24/322 (7%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L AL++ ++ +++ +SK + A ++ ++ LFIVPL L + + EL Sbjct: 29 ILIALLLCIATYGLHN-ILSKYIKYPVICAFVSVSVLVLLFIVPLFSLMKTLITSVSELN 87 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 A G L++ L+ + + + ++ F+ Sbjct: 88 PTAFGAFIEG-----------SKAQILALFSSFPEIESRLRDVFNNISAPSILSYVFNFS 136 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S+ G L + + F+++ LFF++ G + + L + V VI+ Sbjct: 137 SQLGKSSLGFIIDTGFIVVFLFFYFLYGKQAYEYIIELIP-FENIQIANVLDEVTNVIKV 195 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK 272 F + + +G G G V G++ + +++P G + + ++ Y Sbjct: 196 VFYTSLLNIVLQGFAFGILIMFFGYDG-VFFGMLYGLASIVPIVGGGLVWLPLAGYEFYL 254 Query: 273 GNIFNATCLFLWGAIELF-IVDKTL--------RPFLVGGPIKLPFLPTFFGLVGGVRTM 323 GN NA + L+ I ++D + ++ +K+ L FF ++ G+ + Sbjct: 255 GNTHNALIIALYALIVCAVLIDNIIKPILIGIINKKVLKTSVKINELLIFFAILAGLTSF 314 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 G G+ +GP + AL + + Sbjct: 315 GFWGIILGPAVTALFISLLRIY 336 >gi|229103517|ref|ZP_04234199.1| hypothetical protein bcere0019_26670 [Bacillus cereus Rock3-28] gi|229116426|ref|ZP_04245816.1| hypothetical protein bcere0017_27140 [Bacillus cereus Rock1-3] gi|228667258|gb|EEL22710.1| hypothetical protein bcere0017_27140 [Bacillus cereus Rock1-3] gi|228680013|gb|EEL34208.1| hypothetical protein bcere0019_26670 [Bacillus cereus Rock3-28] Length = 302 Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 112/297 (37%), Gaps = 4/297 (1%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + ++ L V + + ++ +LV + + G ++ D+ Sbjct: 8 RNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEG---KVYIQDLSHHRL 64 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L T++ ++++ + +LK + + I A+ I + L I + LF+ + Sbjct: 65 FEWLSTQNYVSIETIEKNAIEYLK-DIPNTITSSATALFGIITNVALVIFTVPFILFYMF 123 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + SL + +I + + + + G ++ I G Y + + Sbjct: 124 KDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDL 183 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG+I A +IP P A ++ + + + A + + I + P Sbjct: 184 PYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISP 243 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 244 RIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRNN 300 >gi|326801059|ref|YP_004318878.1| hypothetical protein Sph21_3671 [Sphingobacterium sp. 21] gi|326551823|gb|ADZ80208.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 438 Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 111/326 (34%), Gaps = 16/326 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ LYFL+ P++ +++I + +P+ + F+ + A+++ + + + + Sbjct: 85 IIAVLYFLQSVLVPLMFSILIAISLYPV-TRFLERFNVHRALSAILSVILAILVIAGLIW 143 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 F+ + ++ + +W++ K P L + Sbjct: 144 FIVHQVIVIGHNGTDLQSKFLTIFNTIQQWIT------------VKFGVEPGELTAKVKE 191 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + + S ++ + + FF + Sbjct: 192 -LSNRALSNAGTYLSAAFGSVGGILAGLVIVPLFSFFLLYYRDFFREFFFHAFRSTSQDK 250 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + V++S LG+ + ++ L GV G + +++ ++P Sbjct: 251 VHETLNRIYSVVQSYLLGLITVMAIVAVLNTVGLLLMGVEYAWFFGTLASLLMLLPYIGI 310 Query: 260 IS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 L K + + A + W + F+ + P +VG + + L ++ Sbjct: 311 AIGSILPAVFALATKDSYWYAIGVVAWFQVVQFLEGNVITPNIVGSKVSINPLMAVIAIL 370 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 G GL GL + L A+I V++ Sbjct: 371 LGGMLFGLAGLILALPLTAVIKVLFD 396 >gi|307823634|ref|ZP_07653863.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307735619|gb|EFO06467.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 351 Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 130/340 (38%), Gaps = 16/340 (4%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W++ I S + L P A ++ + P+ + + T + Sbjct: 6 KWLVFAFISGSAWLVYLLAPVLMPFAFAAMLAYLGDPLTDKLETYQLSR--------TKA 57 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHL 127 V+ +F V L +L + L +V + WL++ IP L + + Sbjct: 58 VLVVFSVMTLVFVLVLLLLVPLLEYQVEHFVSNLPAYVAWLNETVIPWTQRRFHLGIRPV 117 Query: 128 SHPQSLKILSETFLKTNGIDF-IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + Q + ++ + + GI + S G + ++ ++++ + + F+ RD + Sbjct: 118 NLNQIINLVKSHWEQAGGIAATLMSSVSHSGGVIAEWLMNLLLIPVVTFYLLRDWDGLIA 177 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L K++ V V+ + G + + G + W+ G+ + +G+ Sbjct: 178 KVHDLLPRRVAPTATKLAGEVDTVLAAFVRGQFYVMLALGGIYSIGLWMTGLDVALLIGM 237 Query: 247 ITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +++ +P I A L+ + + + I + L P LVG Sbjct: 238 LAGLVSFVPYLGSIVGIVMACVAALVQFHELIQLVPVAIVFIIGQSLEGMVLTPMLVGDK 297 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L + F ++ G + G LG+ + + ++I V+ + Sbjct: 298 IGLHPVAVMFAVLAGGQLFGFLGILLALPVASVIMVLLRH 337 >gi|325676547|ref|ZP_08156225.1| integral membrane protein [Rhodococcus equi ATCC 33707] gi|325552725|gb|EGD22409.1| integral membrane protein [Rhodococcus equi ATCC 33707] Length = 413 Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 17/321 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ IL L+ + PV+ A+++ WP + + A I + Sbjct: 40 AIGALVVGWILQKLWVIA---LPVMLAIVVSTVLWPPTRALTKR-GVPPAGAASITLLIF 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF + + + + EL +K Q V WL P + ++ T + Sbjct: 96 FALFGGVVALIVPSVVDQAPELANKATQGIQ---QVQDWLKGPPVNLQDDQIDTAVHAIT 152 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ I +++ ++I FFF +DG L Sbjct: 153 SKLQESGTA---------IASGVFTGVTTAGSMVVTLFLVLILAFFFVKDGPRFIPWLHG 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ + + ++++ + + +G+ + GVP L ++T I Sbjct: 204 VSGGRAGRHLEEVLGRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFI 263 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P GA ++ + L+ + A + I L+P L +KL Sbjct: 264 GGFVPIVGAFVAGALAVLVALVANGLTTALIVLAIIIAVQQIEGNVLQPVLQSKSMKLHA 323 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + + G G++G F+ Sbjct: 324 VVVLLAVTAGSSLFGIVGAFL 344 >gi|224476488|ref|YP_002634094.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300] gi|222421095|emb|CAL27909.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300] Length = 408 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 121/338 (35%), Gaps = 9/338 (2%) Query: 25 YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 Y + F APV+ LI+ + PI + + + ++ V+V + ++ Sbjct: 48 YIFQPFVIIFNTIAAPVILGLILFYLFNPIINLMERYRIPRLWGIIILYCVAVAVIALI- 106 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L ++K V + ++ + G S +++ Sbjct: 107 VNLLIPVIGGQIKTFSHHVPRYVNKFNDIVDRVTSMSRGTGFSSFYSQIQDQLDKFAKKV 166 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + F F ++ + ++ LFFF +DG + + F Sbjct: 167 PGMVSDYFDGF-GTKVMSFAEAVVNVGVVLVTTPFVLFFFLKDGHHFKETAIKVVPPKFR 225 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++ + + S G +++ G++L Y + G+ + L I A+ +++P Sbjct: 226 QDFHEVIESMSLQVGSYIQGQMFVSLCIGVLLFIGYSIIGLDYSLVLACIAAVTSVVPYL 285 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + +I + + + L + + F + P ++G +K+ L F L+ Sbjct: 286 GPTIAISPAIVMALITSPIMLLKLLIVWTLVQFFEGHFISPNVMGKTLKVHPLTIIFVLL 345 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G++G+ + A++ V+ K + Sbjct: 346 CAGNLLGIVGVILAIPGYAVLKVLVMHLFDIFKRRYNR 383 >gi|229133792|ref|ZP_04262617.1| hypothetical protein bcere0014_27100 [Bacillus cereus BDRD-ST196] gi|228649651|gb|EEL05661.1| hypothetical protein bcere0014_27100 [Bacillus cereus BDRD-ST196] Length = 348 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 128/330 (38%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK ++ + ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPLLVFLENKKVPR-GLAILLLYLFIITLTGVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ D+ L T++ ++++ + +LK Sbjct: 81 SQQLMDLVKNMPTYIKEG---KIYIQDLSHHRLFEWLSTQNYVSIETIEKNAIEYLKG-I 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L I + LF+ ++DG + + S+ + +I + Sbjct: 137 PNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSVLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G + Y + G+P LG+I A +IP P A Sbjct: 197 ETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + K Sbjct: 317 IGMILAVPAYAVTKTVVSNLVRLFKTKRSK 346 >gi|300361263|ref|ZP_07057440.1| permease [Lactobacillus gasseri JV-V03] gi|300353882|gb|EFJ69753.1| permease [Lactobacillus gasseri JV-V03] Length = 393 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 108/320 (33%), Gaps = 12/320 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F PVL A I + P+ K + +I + + + + L+++ Sbjct: 52 FFNAILPPVLVASIQYYLMDPVVDWMEKKLKVPR----IITIILLFVIVLGGLIWIINTL 107 Query: 86 M----LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + L+ Q + P + +S Q+ + Sbjct: 108 IPIIQHQTDSLIKNWPAYWQDAQKGFEKMIHDPRLNGVRSGINQVISDAQTKMFKT---- 163 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S + + ++ LFF +DG ++ + + Sbjct: 164 GQDSFNLALSNLSSAVNVITMIFMMLLTAPFVLFFMLKDGHRLNPYVTKFAPQKLQPSFS 223 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + S G +A G++ Y + G+ + L V+ ++ MIP Sbjct: 224 SLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGVLNMIPYFGTFI 283 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I L + + + + AIE + + + P ++G + + + T L+G Sbjct: 284 AFIPAIILGLISSPMMLVKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASA 343 Query: 322 TMGLLGLFIGPVLMALIAVI 341 GL G+ + A+I +I Sbjct: 344 VAGLWGVIFAIPVYAVIKII 363 >gi|38233541|ref|NP_939308.1| hypothetical protein DIP0945 [Corynebacterium diphtheriae NCTC 13129] gi|38199801|emb|CAE49464.1| Putative membrane protein [Corynebacterium diphtheriae] Length = 472 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 124/338 (36%), Gaps = 20/338 (5%) Query: 12 MRWMIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R +I+ + ++L +G PV+ ALI+ WP +K S A+I+ Sbjct: 63 IRILIIAATAFATWYLLKQVWRG-VLPVILALIVCTVLWPPTIWM-RRKGIPSGIAALIS 120 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ F + + + + L + Q + WL P + + EL + Sbjct: 121 ILASFGFFGFLIWIIAPDVGRQSQTLYFQAFEGIQK---IQLWLQGPPLSLDSEELNDRI 177 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + S T + +++ +++ FFF +DG Sbjct: 178 NAAAGWFQSKSGTIAGEIFSGL---------GVATSVLVTLGVVLVLTFFFLKDGEKFLP 228 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + ++ + ++++ + + +G L GVP +AL V Sbjct: 229 WVRGIVGKRAGWHLTELLARSWITLCGFVRAQALVSLVDAIAIGGGLLLLGVPMALALAV 288 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T I IP GA ++ T + L+ + A + + L P L + Sbjct: 289 LTFIAGFIPIVGAFVAGTLAVLVALVSLGLTKAVITLIIVLAVQQLEGNVLSPILQSRAM 348 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ A+IAV+++ Sbjct: 349 NLHPVVVLVSVTLGGSLFGIVGAFLAVPTAAMIAVLFR 386 >gi|295702680|ref|YP_003595755.1| hypothetical protein BMD_0519 [Bacillus megaterium DSM 319] gi|294800339|gb|ADF37405.1| Conserved Hypothetical Protein [Bacillus megaterium DSM 319] Length = 380 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 126/327 (38%), Gaps = 7/327 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI++ F+K P++ A I + P+ K + +I+ + + + I Sbjct: 40 IGFILIPISIFIKTIALPIILAGICFYLFNPLVDFLERKGVKR-----IISILVLYIVII 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L + + +K V +++ V ++++ + + + + Sbjct: 95 GALAIIISSVIPPLKNQVDRLIDNIPELTHDVQHAVTNLSNNRYVEQGLQSANTDLDKIS 154 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L F + G I + LS+ + LF+ +DG ++ + L + Sbjct: 155 KDASKHLSKYVSGFSSGIVNFVGTIT-EIILSVAVLPFILFYLLKDGKNLPNYIVKLLPN 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I + + + G +AI G++L Y + G+ + L +I + ++ Sbjct: 214 RSRSEAKFILADMNHALSAYIRGQIFVAICIGVLLFIGYLIIGLDYALLLAIIAMVTNVV 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI +I + + F L + A+ + K + P ++G + + + F Sbjct: 274 PYLGPIIAIIPAIIIAFITSPFMLVKLAIVWAVVQLLEGKVISPQIMGRSLDIHPITVIF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ VI Sbjct: 334 VILTAGNLFGIIGIILAVPGYAVLKVI 360 >gi|270291466|ref|ZP_06197688.1| permease [Pediococcus acidilactici 7_4] gi|304385181|ref|ZP_07367527.1| membrane protein [Pediococcus acidilactici DSM 20284] gi|270280312|gb|EFA26148.1| permease [Pediococcus acidilactici 7_4] gi|304329375|gb|EFL96595.1| membrane protein [Pediococcus acidilactici DSM 20284] Length = 381 Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 106/310 (34%), Gaps = 4/310 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A ++ + P+ S+ + I V V L + ++ + + L Sbjct: 60 PIILAGVLYYLLNPLVDRLESRFKMKRVVSISIIFVGVAILIVAGVVAVIPVIREQTAAL 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + I ++ I + + + + + + Sbjct: 120 IQNWPDYWNAAI---EKINGILNDPRLGDFQKQFHGVSSETIQSWSKKVTSVANNTVTSL 176 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S +I + II M LF+ RDG + + L + + +I + + Sbjct: 177 GSVLSLIT-KVVIGIITMPFILFYLLRDGHDLPEYLAKAFPVRYRPQFLQILGEINTQLS 235 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G ++A L+ Y + G+ + L V + +IP SI + Sbjct: 236 QYIRGQLVVAFFVALMFFIGYLVIGLKFALTLAVAAGFLNLIPYLGSFLAMVPSIVIGAF 295 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + + AIE + + + P ++G + + + L+ + GL+G+ G Sbjct: 296 ISPVMLVKVLIVFAIEQTLEGRFISPLVLGSNLAIHPVTILVVLLASGQMFGLVGVIFGI 355 Query: 333 VLMALIAVIW 342 A++ V++ Sbjct: 356 PAYAVLKVLF 365 >gi|330684507|gb|EGG96222.1| putative membrane protein [Staphylococcus epidermidis VCU121] Length = 406 Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 135/358 (37%), Gaps = 18/358 (5%) Query: 10 GIMRWMIMFIILVSL----YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I++ Y + F AP++ +LII + P+ + + Sbjct: 39 GLLALVLLGIVIFIFDKVSYVFEPFIIIFNTIAAPIIVSLIIFYLFNPLVNLMERYRIPR 98 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ + + + + + + + +L S + + Q+ ++ + Sbjct: 99 -----LVGIMIIYIAIVGIIALIVNLLIPVIGSQLGSFINNSPQYFKKFTNTINKLTSNS 153 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + +++ SL T L F + A+ F + + I+ LFF Sbjct: 154 IFAGYYSQINDQLNSLTKKIPTMLSDYFDGFGSKLAT-FAEAVANVGVVIVTTPFVLFFM 212 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG ++ F + + + + S G I++ G++L Y + G Sbjct: 213 LKDGHKFKDFTTNIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLFIGYSIIG 272 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L I A+ +++P P + +I + I + L + + F + Sbjct: 273 LKYSLILACIAAVTSVVPYLGPTIAISPAIVIAIITSPLMVLKLAIVWTLVQFFEGHFIS 332 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P ++G +K+ L F L+ +G++G+ +G A++ V+ + K + Sbjct: 333 PNIMGKTLKIHPLTIIFILLCAGNLLGIVGVILGIPGYAVLKVLVSHVFLLFKRRYNR 390 >gi|262203276|ref|YP_003274484.1| hypothetical protein Gbro_3393 [Gordonia bronchialis DSM 43247] gi|262086623|gb|ACY22591.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM 43247] Length = 426 Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 111/323 (34%), Gaps = 23/323 (7%) Query: 17 MFIILVSLYFLKGFFAPVLS--------ALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ +L+ + + L A+I+ WP ++ +V+ + Sbjct: 57 IILVVATLWVVM-WLLAKLWVILLPILLAIIVCTILWPP-VRWMRNHGVPPAAASVVMML 114 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F + + + + +L ++ + + W+ P + +L + Sbjct: 115 VAVGVFAGVIGAIVPSVVDQAPDLANRATDGVKK---LQDWVQGPPLNVRDEQLDNVVHT 171 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ S T I + ++I ++ +FFF +DG L Sbjct: 172 ITDKLQSSSST---------IAQGVFSGVGTATSLLVTIFSALVLVFFFLKDGPKFVPWL 222 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ ++ + + +++ + ++G + +P L VIT Sbjct: 223 ARNLGKPTGSHVGEVLNRMWASLGGFIRTQALVSFVDAALIGIGLVILDIPLAGVLIVIT 282 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP GA ++ + L+ + +A + + L+P+L + L Sbjct: 283 FLGGFIPIVGAFVAGALAVLIALVSNGLTSALIVLAIILAVQQLEGNVLQPWLQSKSMDL 342 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 + + G G+ G F+ Sbjct: 343 HAVIVLLSVTLGGTLFGITGAFL 365 >gi|116629975|ref|YP_815147.1| permease [Lactobacillus gasseri ATCC 33323] gi|238853587|ref|ZP_04643957.1| transport protein [Lactobacillus gasseri 202-4] gi|282851417|ref|ZP_06260782.1| membrane family protein [Lactobacillus gasseri 224-1] gi|311110392|ref|ZP_07711789.1| membrane protein [Lactobacillus gasseri MV-22] gi|116095557|gb|ABJ60709.1| Predicted permease [Lactobacillus gasseri ATCC 33323] gi|238833805|gb|EEQ26072.1| transport protein [Lactobacillus gasseri 202-4] gi|282557385|gb|EFB62982.1| membrane family protein [Lactobacillus gasseri 224-1] gi|311065546|gb|EFQ45886.1| membrane protein [Lactobacillus gasseri MV-22] Length = 393 Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 106/316 (33%), Gaps = 4/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F P+L A I + P+ K + ++ V V+ I + L Sbjct: 52 FFNAILPPILVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVLGGLIWIINTLIPII 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + L+ Q + P + +S Q+ + + Sbjct: 112 QHQTDSLIKNWPAYWQDAQKGFEKMIRDPRLNGVRGGINQAVSDAQTKMFKT----GQDS 167 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S + ++++ LFF +DG ++ + + + Sbjct: 168 FNLALSNLSSAVNVITMIFMTLLTAPFVLFFMLKDGHRLNPYVTKFAPQRLQPSFSSLLS 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G +A G++ Y + G+ + L V+ ++ MIP Sbjct: 228 DINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGVLNMIPYFGTFIAFIP 287 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I L + + + + AIE + + + P ++G + + + T L+G GL Sbjct: 288 AIILGLISSPMMLVKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILLLIGASAVAGL 347 Query: 326 LGLFIGPVLMALIAVI 341 G+ + A+I +I Sbjct: 348 WGVIFAIPVYAVIKII 363 >gi|237750422|ref|ZP_04580902.1| amaA [Helicobacter bilis ATCC 43879] gi|229373952|gb|EEO24343.1| amaA [Helicobacter bilis ATCC 43879] Length = 349 Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 145/362 (40%), Gaps = 28/362 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + + + +L + + +L A ++ + + + + ++ ++ Sbjct: 1 MQSKIVFGLLFGGVCVATLMLYQAYLFNILIAFLLCVATIWLKHWLQNYVK-NALLASLF 59 Query: 66 ATVSVMCLFIVPLLFLFY--YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 A + ++ L +P+LF+ Y + ++M +S + +Q + + +P Sbjct: 60 ALLLMIGLVFIPVLFVCYRAFLGVKMINWLSLQSMFDQSKLALQNLAEKLPFIH------ 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L L + + +S G L + + +I+ LF F+ G Sbjct: 114 -------DYLPSLLNEISFAKISGIVLKLSSIVGENGLKFIIDGFVIIVFLFVFFYFGER 166 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + A +++ V +R FL + +G G + G V Sbjct: 167 LYAYMKRILP-FEEAQINEVAMEVSGTLRLVFLSTFFNVVMQGTAFGIIAYFFGFDG-VL 224 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV 301 LG++ I +MIP G I + + L+ +G+ A + L+ A+ + FI+D ++P+L+ Sbjct: 225 LGILYGICSMIPIVGGVIVWLPICAILVYQGDFKGAVIVGLYSAVFIGFIIDNIVKPWLI 284 Query: 302 G--------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G P+++ FF ++ G+ G G+ IGP + AL + + + Sbjct: 285 GIVNKRILRTPLQINEFVIFFAILAGIGAFGFWGIIIGPAITALFIALLRVYEHEFVDKN 344 Query: 354 EK 355 ++ Sbjct: 345 KE 346 >gi|257898989|ref|ZP_05678642.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257836901|gb|EEV61975.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 372 Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 115/334 (34%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPI-VKLLMKAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 99 VQQISSLASNMPDFIKQVENWLKEVAELPVFKEVD------INKYFEQLDISYGTIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 153 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 213 QLNKTLANYISGQAIECLFVGTFTFLGYMIIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + I + A L I + + P ++G +K+ L L+ GL Sbjct: 273 AFLVTIFNDPIKALLCCLVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I IKE+K+ + Sbjct: 333 LGIFLGVPFYAICKTIISYIIKIIKEDKQNENKK 366 >gi|257081875|ref|ZP_05576236.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256989905|gb|EEU77207.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 394 Score = 99.5 bits (247), Expect = 8e-19, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSIIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|56963356|ref|YP_175087.1| transporter [Bacillus clausii KSM-K16] gi|56909599|dbj|BAD64126.1| transporter [Bacillus clausii KSM-K16] Length = 358 Score = 99.1 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 107/315 (33%), Gaps = 11/315 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P+ A + + PI F+ + + ++ + L + Sbjct: 39 ILATLLGPLCVAFVSAYLLHPIVEWFV-RLGLPRALATFMLFLAFILAIAAMLFWGLPAL 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++KE + +P L+++ + + ++L +P + + + Sbjct: 98 AAQVKEAMD----------VLPGQLAEVKKSLLNLQRTAENLPNPLDDHVGEWSVKIESF 147 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L ++ I + +F+ +D + + L + + Sbjct: 148 AKAGLDQIEQVIIRMLQSFMTWIVVPFLVFYLLKDYELLKRVAFYLTPRKWRKGLTAYAN 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + S G ++A G++ A W+ GVP + LG IP I Sbjct: 208 DVDRTFGSYVRGQLLVAFCVGVLSTVALWILGVPYPIVLGFFVGATDFIPYFGAIIGAIP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + I I L P +VG + L + L+ GV G+ Sbjct: 268 AVGAALLESTTLGLYTVIALVIIQQIEGNLLSPVIVGRTVHLHPMIIIIALLIGVEAGGI 327 Query: 326 LGLFIGPVLMALIAV 340 +GL I + A++ V Sbjct: 328 VGLLIAVPVAAILKV 342 >gi|229030594|ref|ZP_04186629.1| hypothetical protein bcere0028_26620 [Bacillus cereus AH1271] gi|228730761|gb|EEL81706.1| hypothetical protein bcere0028_26620 [Bacillus cereus AH1271] Length = 302 Score = 99.1 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 112/297 (37%), Gaps = 4/297 (1%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + ++ L V + + ++ +LV + + G ++ D+ Sbjct: 8 RNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEG---KLYIQDLSHHRL 64 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L T++ ++++ + +LK + + I A+ I + L I + LF+ + Sbjct: 65 FEWLSTQNYVSIETIEKNAIEYLK-DIPNTITSSATALFGIITNVALVIFTVPFILFYMF 123 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + SL + +I + + + + G ++ I G Y + + Sbjct: 124 KDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDL 183 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG+I A +IP P A ++ + + + A + + I + P Sbjct: 184 PYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISP 243 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 244 RIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSN 300 >gi|239632127|ref|ZP_04675158.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526592|gb|EEQ65593.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 382 Score = 99.1 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 113/324 (34%), Gaps = 7/324 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F P+LSA + + PI + K S ++ + V+ ++ Sbjct: 22 FLFAPVATFFSTLLIPILSAGFLFYLFNPI-VKLLQKFHISRNISILLIFLVVIGALVLV 80 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ + V+ + + V ++S W L + SL+I Sbjct: 81 FMAVLPNLIYQVTQFVTNIPDFLKG---VRSFISKASHYTWYQRL--NIGKYVASLQISP 135 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L F + G + +SII + + LF+F +DG + + + H + Sbjct: 136 SKVLSKVLGGFSTGLPTVIGSVA-SMMISIITIPVMLFYFLKDGENFVPSIQKMLPHRYH 194 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + G I + G Y + G+P LG I I+ +IP Sbjct: 195 EEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVTIIPYL 254 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + + I + P ++G + + L L+ Sbjct: 255 GPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIILLM 314 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 GLLG + A+I + Sbjct: 315 VAGNLWGLLGTILAVPTYAVIKTV 338 >gi|307290384|ref|ZP_07570299.1| hypothetical protein HMPREF9509_00687 [Enterococcus faecalis TX0411] gi|312899976|ref|ZP_07759294.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|306498577|gb|EFM68079.1| hypothetical protein HMPREF9509_00687 [Enterococcus faecalis TX0411] gi|311292972|gb|EFQ71528.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315030341|gb|EFT42273.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 394 Score = 99.1 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLIKFLPVKMRKPTLKVLAEVNDQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|291531870|emb|CBK97455.1| Predicted permease [Eubacterium siraeum 70/3] Length = 468 Score = 99.1 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 103/304 (33%), Gaps = 4/304 (1%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGM 117 I + + + + L + + LV+ + Q V + L + P Sbjct: 108 RVMSVAITMILALLILTGIIWVLLPQLIDTITMLVNNMPTYVTQISDWVSQTLRNYPEVE 167 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGID-FIPRFASRFGMIFLDYCLSIIFMIIALFF 176 +T +S + + +E + N I I +F++ L + I L Sbjct: 168 AYVLQFTGGISDMLNNWLSTELLPQMNNIWNLISSNVMNIISVFMNLLLGFVIAIYFLNS 227 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + L L + +R V K G + + G+V + Sbjct: 228 KELFAAQFKKILYCLFKPKVATKIINSTREVNKSFGQFITGKILDSFIIGMVYVLLMSIF 287 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P V GV+ I +IP G I + + L++ + + I I Sbjct: 288 NMPYAVLCGVVMGIFCIIPYFGPFIGYIPCMLLLVLV-DPIQCIYFTIMVVIIQNIDGNV 346 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G L FG++ G G +GL IG L A++ K + ENK+ Sbjct: 347 LAPKIIGDSTGLSSFWVIFGMLVGQGLFGFVGLIIGIPLFAVVYSFTKNRVKKRLENKDL 406 Query: 356 ISSN 359 S + Sbjct: 407 PSDS 410 >gi|227519714|ref|ZP_03949763.1| permease [Enterococcus faecalis TX0104] gi|227554097|ref|ZP_03984144.1| permease [Enterococcus faecalis HH22] gi|229545030|ref|ZP_04433755.1| permease [Enterococcus faecalis TX1322] gi|229549274|ref|ZP_04437999.1| permease [Enterococcus faecalis ATCC 29200] gi|255971986|ref|ZP_05422572.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256616886|ref|ZP_05473732.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256763240|ref|ZP_05503820.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256957841|ref|ZP_05562012.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256961160|ref|ZP_05565331.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256963721|ref|ZP_05567892.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257079779|ref|ZP_05574140.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257087584|ref|ZP_05581945.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257090743|ref|ZP_05585104.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257416791|ref|ZP_05593785.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|293384106|ref|ZP_06630000.1| membrane protein [Enterococcus faecalis R712] gi|293386921|ref|ZP_06631490.1| membrane protein [Enterococcus faecalis S613] gi|307270682|ref|ZP_07551973.1| hypothetical protein HMPREF9498_02775 [Enterococcus faecalis TX4248] gi|307271668|ref|ZP_07552939.1| hypothetical protein HMPREF9514_00419 [Enterococcus faecalis TX0855] gi|307276850|ref|ZP_07557961.1| hypothetical protein HMPREF9521_02462 [Enterococcus faecalis TX2134] gi|307287573|ref|ZP_07567616.1| hypothetical protein HMPREF9505_01021 [Enterococcus faecalis TX0109] gi|312902373|ref|ZP_07761579.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312907943|ref|ZP_07766926.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312953633|ref|ZP_07772470.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|312978529|ref|ZP_07790267.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|227072802|gb|EEI10765.1| permease [Enterococcus faecalis TX0104] gi|227176723|gb|EEI57695.1| permease [Enterococcus faecalis HH22] gi|229305511|gb|EEN71507.1| permease [Enterococcus faecalis ATCC 29200] gi|229309922|gb|EEN75909.1| permease [Enterococcus faecalis TX1322] gi|255963004|gb|EET95480.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256596413|gb|EEU15589.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256684491|gb|EEU24186.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256948337|gb|EEU64969.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256951656|gb|EEU68288.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256954217|gb|EEU70849.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256987809|gb|EEU75111.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256995614|gb|EEU82916.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256999555|gb|EEU86075.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257158619|gb|EEU88579.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|291078586|gb|EFE15950.1| membrane protein [Enterococcus faecalis R712] gi|291083591|gb|EFE20554.1| membrane protein [Enterococcus faecalis S613] gi|306501311|gb|EFM70614.1| hypothetical protein HMPREF9505_01021 [Enterococcus faecalis TX0109] gi|306506487|gb|EFM75646.1| hypothetical protein HMPREF9521_02462 [Enterococcus faecalis TX2134] gi|306511546|gb|EFM80545.1| hypothetical protein HMPREF9514_00419 [Enterococcus faecalis TX0855] gi|306512992|gb|EFM81633.1| hypothetical protein HMPREF9498_02775 [Enterococcus faecalis TX4248] gi|310626034|gb|EFQ09317.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310628471|gb|EFQ11754.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310634043|gb|EFQ17326.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311288678|gb|EFQ67234.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|315025258|gb|EFT37190.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315032735|gb|EFT44667.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315035807|gb|EFT47739.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315143766|gb|EFT87782.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315148577|gb|EFT92593.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315150014|gb|EFT94030.1| conserved hypothetical protein [Enterococcus faecalis TX0012] gi|315151900|gb|EFT95916.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315155484|gb|EFT99500.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315159219|gb|EFU03236.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315164970|gb|EFU08987.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315168593|gb|EFU12610.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315170147|gb|EFU14164.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315173354|gb|EFU17371.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315576206|gb|EFU88397.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315579217|gb|EFU91408.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315582922|gb|EFU95113.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|327535833|gb|AEA94667.1| permease protein [Enterococcus faecalis OG1RF] Length = 394 Score = 99.1 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|91773302|ref|YP_565994.1| hypothetical protein Mbur_1326 [Methanococcoides burtonii DSM 6242] gi|91712317|gb|ABE52244.1| protein of unknown function UPF0118 [Methanococcoides burtonii DSM 6242] Length = 354 Score = 99.1 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 136/353 (38%), Gaps = 19/353 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + + + L ++ ++ + PIY+ K+ + + Sbjct: 18 KMVLSVALVLLFSLFIIILLPIADGIMLGIVFAYIGRPIYNFIKMKRH--------LGAL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++P++ + G++E+ + + ++ V L D + + + +++ Sbjct: 70 VATMFIVIPIVMILGMGIIEIANQLMWIA---ENQGAVIESLLDFIRNLNIPDAYYENI- 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q++ S + L G +A M + ++++ ++ +F DG + + + Sbjct: 126 -RQTIWNSSISILPLLGNLVFVSYARGIAM----FMINLLVAVLVCYFLLADGDGLYRSV 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K+ + ++ F+G A+ + ++ G+ +AL + Sbjct: 181 LRIIPKGNQHLVKRYVHHMDIILSGVFIGNAYAALSVSTLSVIVFYAFGLSHVLALATLI 240 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIK 306 + ++IP A + ++I +A F+ +I ++ + LRP+L Sbjct: 241 FVASVIPMFAGYMVLVVLTIVRYFSLGFESALIFFVVSSIIIYAPPEFFLRPYLASIKSH 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +GG G+ G F P+L+ + ++ + ++ + S++ Sbjct: 301 IHPFLIMLAFLGGAFVGGIAGFFAAPILLGTLVSAYRVYVEDLEYVSPETSAD 353 >gi|293557070|ref|ZP_06675629.1| putative permease [Enterococcus faecium E1039] gi|291600758|gb|EFF31051.1| putative permease [Enterococcus faecium E1039] Length = 424 Score = 99.1 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 81 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 138 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 139 KEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 198 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 199 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 253 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 254 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 313 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 314 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 372 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 373 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 404 >gi|262375590|ref|ZP_06068823.1| sporulation integral membrane protein YtvI [Acinetobacter lwoffii SH145] gi|262309844|gb|EEY90974.1| sporulation integral membrane protein YtvI [Acinetobacter lwoffii SH145] Length = 406 Score = 99.1 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 127/346 (36%), Gaps = 11/346 (3%) Query: 6 LNPQGIMRWMIMF---IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + R +I+ +IL LY LK P ++A +I + P+ + + + + Sbjct: 1 MVDRTLRRILILAGIALILWVLYLLKPVVVPFVAAFLIAYLFSPLVN-VLHRIGLARWLS 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASE 121 I + + + + + +L ++ + WLSD Sbjct: 60 ISIVFIGIGIVVTLVMWYLVPLVWQQLMYARDSIPAGIHWINYTFLPWLSD---SFNLVP 116 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +T + I + ++ G+ F+ +I+ + I F+F D Sbjct: 117 MEIDTDQISSVVMDYVQTNYSADSIQAMLLKLAQSGLNFIQIGGTIVLIPIIAFYFLLDW 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L + I V+ + G ++ + G+V L G+ Sbjct: 177 DRMLDSLRRLIPRPYEKTTLNIVSECHSVLGAFVKGQFLVMVLLGVVYAVGLQLIGLEIG 236 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+I + ++IP ++ + + + + + + L+P Sbjct: 237 LIIGMIAGLCSIIPYLGFAVGIIAAVIATFFQFGIDWWQLVLVGIVFMVGQAVEGYILQP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FL+G I L + F ++ G + G LG+ I + A+I V+ + Sbjct: 297 FLLGDKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRH 342 >gi|257888574|ref|ZP_05668227.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257897049|ref|ZP_05676702.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|293378740|ref|ZP_06624898.1| putative membrane protein [Enterococcus faecium PC4.1] gi|257824628|gb|EEV51560.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833614|gb|EEV60035.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|292642668|gb|EFF60820.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 372 Score = 99.1 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 115/334 (34%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPI-VKLLMKAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 99 VQQISSLASSMPDFIKQVESWLKEVAELPVFKEVD------INKYFEQLDISYGTIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 153 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 213 QLNKTLANYISGQAIECLFVGTFTFLGYMIIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + I + A L I + + P ++G +K+ L L+ GL Sbjct: 273 AFLVTIFNDPIKALLCCLVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I IKE+K+ + Sbjct: 333 LGIFLGVPFYAICKTIISYIIKIIKEDKQNENKK 366 >gi|29375032|ref|NP_814185.1| hypothetical protein EF0396 [Enterococcus faecalis V583] gi|227553764|ref|ZP_03983813.1| permease [Enterococcus faecalis HH22] gi|229547716|ref|ZP_04436441.1| permease [Enterococcus faecalis TX1322] gi|255970953|ref|ZP_05421539.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255973465|ref|ZP_05424051.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256617319|ref|ZP_05474165.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256852374|ref|ZP_05557750.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256957715|ref|ZP_05561886.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256963168|ref|ZP_05567339.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257083480|ref|ZP_05577841.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257085756|ref|ZP_05580117.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257088896|ref|ZP_05583257.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415129|ref|ZP_05592123.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257418175|ref|ZP_05595169.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257420681|ref|ZP_05597671.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294780634|ref|ZP_06745995.1| putative ATP synthase F0, A subunit [Enterococcus faecalis PC1.1] gi|300862228|ref|ZP_07108308.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TUSoD Ef11] gi|307270055|ref|ZP_07551377.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4248] gi|307272207|ref|ZP_07553467.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0855] gi|307275216|ref|ZP_07556362.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2134] gi|307282402|ref|ZP_07562609.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0860] gi|307290690|ref|ZP_07570596.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0411] gi|312900525|ref|ZP_07759825.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0470] gi|312904906|ref|ZP_07764045.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0635] gi|312952033|ref|ZP_07770917.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0102] gi|29342491|gb|AAO80256.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227177146|gb|EEI58118.1| permease [Enterococcus faecalis HH22] gi|229307208|gb|EEN73195.1| permease [Enterococcus faecalis TX1322] gi|255961971|gb|EET94447.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255966337|gb|EET96959.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256596846|gb|EEU16022.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256712228|gb|EEU27260.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256948211|gb|EEU64843.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256953664|gb|EEU70296.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256991510|gb|EEU78812.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256993786|gb|EEU81088.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256997708|gb|EEU84228.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257156957|gb|EEU86917.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257160003|gb|EEU89963.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257162505|gb|EEU92465.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294452244|gb|EFG20685.1| putative ATP synthase F0, A subunit [Enterococcus faecalis PC1.1] gi|295114222|emb|CBL32859.1| Predicted permease [Enterococcus sp. 7L76] gi|300848753|gb|EFK76510.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TUSoD Ef11] gi|306498242|gb|EFM67753.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0411] gi|306503765|gb|EFM72992.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0860] gi|306508084|gb|EFM77208.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2134] gi|306511096|gb|EFM80106.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0855] gi|306513631|gb|EFM82241.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4248] gi|310630033|gb|EFQ13316.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0102] gi|310631790|gb|EFQ15073.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0635] gi|311292350|gb|EFQ70906.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0470] gi|315026218|gb|EFT38150.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2137] gi|315028476|gb|EFT40408.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4000] gi|315032188|gb|EFT44120.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0017] gi|315035401|gb|EFT47333.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0027] gi|315144063|gb|EFT88079.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2141] gi|315146781|gb|EFT90797.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4244] gi|315153792|gb|EFT97808.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0031] gi|315154921|gb|EFT98937.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0043] gi|315158896|gb|EFU02913.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0312] gi|315161137|gb|EFU05154.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0645] gi|315167780|gb|EFU11797.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1341] gi|315170577|gb|EFU14594.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1342] gi|315574799|gb|EFU86990.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0309B] gi|315576390|gb|EFU88581.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0630] gi|315582246|gb|EFU94437.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0309A] gi|327534136|gb|AEA92970.1| hypothetical protein OG1RF_10283 [Enterococcus faecalis OG1RF] gi|329574935|gb|EGG56492.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1467] Length = 394 Score = 99.1 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 114/334 (34%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PVL +I+ + P+ K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVLFGIILFYLLNPMVKRLEKKIP--RVWAIAILYVLIIALLVLAGLQLFP 102 Query: 84 YGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + + + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ A+ L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+G+ G + L+ V K+ + Sbjct: 341 LFGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|294615250|ref|ZP_06695129.1| hypothetical protein EfmE1636_1354 [Enterococcus faecium E1636] gi|291591889|gb|EFF23519.1| hypothetical protein EfmE1636_1354 [Enterococcus faecium E1636] Length = 424 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 81 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 138 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 139 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 198 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 199 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 253 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 254 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 313 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 314 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 372 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 373 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 404 >gi|220929940|ref|YP_002506849.1| hypothetical protein Ccel_2541 [Clostridium cellulolyticum H10] gi|220000268|gb|ACL76869.1| protein of unknown function UPF0118 [Clostridium cellulolyticum H10] Length = 392 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 109/312 (34%), Gaps = 20/312 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L ++ + PI + +++ F++ L L Sbjct: 44 FVYSIIFPILFGGLLYYILRPIVLMLEKGRVPHIW--------AILLAFVIVLSALILLS 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + S+ + + + + L +L + L Sbjct: 96 SYTGSIIKSQFNDFAKSLPYLYESAEN-----TINNLLKSNLLSYFDSSSFQTSDLTEKV 150 Query: 146 IDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +F+ A G +++ +I I + + LF+F +DG + Sbjct: 151 SNFLQGAAKSVGKNTINFISAITNIGSVIIILPVILFYFLKDGHKFMPSIVRFVPSSQKD 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +KI + + V+ + G ++A GL++ Y + G+ + L + I +IP Sbjct: 211 NIRKILKDIDFVLSNYIAGQLLVAFFIGLLMYIGYLIIGLKYSLLLAIFAMITCIIPFFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I L + N F A +F+ I I + + P ++ + + L L+G Sbjct: 271 PWIGIIPAILLSLADNPFMAIKIFIVMIIVQQIDNNFISPQVMKKSMDIHPLTVILLLMG 330 Query: 319 GVRTMGLLGLFI 330 + G +GL I Sbjct: 331 ILPIFGFIGLII 342 >gi|227519073|ref|ZP_03949122.1| permease [Enterococcus faecalis TX0104] gi|227073421|gb|EEI11384.1| permease [Enterococcus faecalis TX0104] gi|315173850|gb|EFU17867.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1346] gi|323479551|gb|ADX78990.1| conserved hypothetical protein [Enterococcus faecalis 62] Length = 394 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 112/334 (33%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PVL +I+ + P+ K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVLFGIILFYLLNPMVKRLEKKIP--RVWAIAILYVLIIALLVLAGLQLFP 102 Query: 84 YGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQAVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ A+ L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+G+ G + L+ V K+ + Sbjct: 341 LFGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|257084417|ref|ZP_05578778.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256992447|gb|EEU79749.1| conserved hypothetical protein [Enterococcus faecalis Fly1] Length = 394 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + + + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQIEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|255975043|ref|ZP_05425629.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|307285552|ref|ZP_07565691.1| hypothetical protein HMPREF9515_02935 [Enterococcus faecalis TX0860] gi|255967915|gb|EET98537.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|306502776|gb|EFM72041.1| hypothetical protein HMPREF9515_02935 [Enterococcus faecalis TX0860] Length = 394 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNHQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|322372071|ref|ZP_08046613.1| permease [Haladaptatus paucihalophilus DX253] gi|320548493|gb|EFW90165.1| permease [Haladaptatus paucihalophilus DX253] Length = 408 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 126/339 (37%), Gaps = 27/339 (7%) Query: 3 ETMLNPQGIMRWMIMFII-LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + N + + W+I ++ L+ + L + ++ L + + + PIY + + + Sbjct: 4 DPTQNRERVAWWLIFGVLGLIIAFILYSYVGTIVLGLFVYYATRPIYRRLSHRIQPR-SL 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A +A + I+ + + + G+ ++ EL + Q+ + +L I G + Sbjct: 63 AAGLALGVLAFPGILLIAYTVFVGIQQLSELAG--IDLRQYESSLGPYLQTILGQQNPQD 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + LS+PQ L +L + A + + + +I F+ RD Sbjct: 121 AINQILSNPQQLT----QYLNPQTASGVVTSAGGYLGAAASGLIHVFIALIIAFYLLRDD 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA----- 236 ++ S A ++ V + + + G + A +V Y Sbjct: 177 QKLAGWFSSQISGENSATHAYLTE-VDTDLETIYFGNILNAFVVAIVAAITYTALDSIAP 235 Query: 237 ---GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI-------KGNIFNATCLFLWG 285 G+P+ V LG++T + ++IP G I + + +YL + F L + Sbjct: 236 PEVGIPAAVLLGLLTGLGSLIPVVGMKIVYVPIGLYLAGRSLVTAPQSIWFPIVFLLVAA 295 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I + + LRP++ G L F + G G Sbjct: 296 VIVDGVTELLLRPYISGR--NLHVGLVLFAYILGPLLFG 332 >gi|294619528|ref|ZP_06698965.1| domain of unknown function, putative [Enterococcus faecium E1679] gi|314939645|ref|ZP_07846870.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314943988|ref|ZP_07850689.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314953874|ref|ZP_07856737.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314993533|ref|ZP_07858889.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314997046|ref|ZP_07862036.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|291594219|gb|EFF25656.1| domain of unknown function, putative [Enterococcus faecium E1679] gi|313588817|gb|EFR67662.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313591970|gb|EFR70815.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594209|gb|EFR73054.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597412|gb|EFR76257.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641054|gb|EFS05634.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] Length = 424 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 81 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 138 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 139 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 198 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 199 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 253 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 254 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 313 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 314 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 372 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 373 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 404 >gi|312864862|ref|ZP_07725093.1| putative membrane protein [Streptococcus downei F0415] gi|311099989|gb|EFQ58202.1| putative membrane protein [Streptococcus downei F0415] Length = 388 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 128/357 (35%), Gaps = 10/357 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL----------KGFFAPVLSALIIGFTSWPIYSSFISK 54 +++ + + +I+ + ++LY L GF ++ ++I + + ++ Sbjct: 17 VVDNRFVSSLVILILTFLALYLLTRISFIFTALAGFLTVIMLPIVISVLLYYLLKPIVNF 76 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 E+ V+A V + + L++ ++E + + H I + Sbjct: 77 VEKHLPINRVMAISLVYLVIVGLLIWGGASFFPMLQEQIMSFINNLPHYIKSVERQVNQV 136 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E L + N I +A F ++II M + Sbjct: 137 IADNRFEAIRPQLEDWVNNYSSKAIGYAENFSKNIVSWAGDFASAVTRVAIAIIMMPFIV 196 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ RD + + + +I V + G +AI G++ + Sbjct: 197 FYLLRDSDKLKGSILKTFPVKWRKPLSRILSDVNTQWQGYVQGQVTVAIVVGIMFSILFS 256 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L + VALG++ ++ +IP +I L + + + + A+E I + Sbjct: 257 LIDLRYAVALGILAGVLNLIPYLGSFLAMLPAIILGLVAGPWMLIKVLIVFAVEQTIEGR 316 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + P ++G + + + F L+ G+ G+ +G + + + V+ KE ++ Sbjct: 317 FVSPLVLGTKLSIHPIMILFILLASGSVFGVWGVLLGIPVYSALKVVVKEIFDWYRD 373 >gi|229158199|ref|ZP_04286266.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 4342] gi|228625157|gb|EEK81917.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 4342] Length = 344 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 119/331 (35%), Gaps = 12/331 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L+ V + + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 147 DF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q++ + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G F IY+ G+ A L + + + + + + P ++ I L L T Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLATLIA 299 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L G + G LGL IGPV + L+ + K + Sbjct: 300 LFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 330 >gi|306833219|ref|ZP_07466348.1| membrane protein [Streptococcus bovis ATCC 700338] gi|304424586|gb|EFM27723.1| membrane protein [Streptococcus bovis ATCC 700338] Length = 395 Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 138/361 (38%), Gaps = 21/361 (5%) Query: 6 LNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSSF 51 LN Q ++ +I F++ ++LY F+ P++ + I+ + P+ F Sbjct: 19 LNNQAVVAVLITFLVFLTLYLFTKISFLFTPIISFIAIIMLPLVISAILYYLIKPL-VGF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 I K+ S T I ++ L I + ++ V + + Sbjct: 78 IEKRGVSRTTSIFIVFAIIIALLIWAVASFIPTIQEQLTSFVENLPSYVRSINVEANKFL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + P E + LS+ + I N ID+ FAS + ++II Sbjct: 138 ESPWLANYQEELEEMLSNVSTKAIDYAESFSKNAIDWASNFASAIARVT----VAIIMSP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+F RD + + L ++ + K + G +AI G++ Sbjct: 194 FILFYFLRDSGKMKEGLLKTLPTRMRRPISRVLGDINKQLAGYVQGQVTVAIVVGIIFTI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ G+I + MIP G+ ++ V I +++G I + + IE Sbjct: 254 FFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGVVQGPIML-IKVLIAFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+F+G + A I V+ KE K Sbjct: 313 IEGRFVSPLVLGSKLSIHPITIMFILLTSGAMFGVWGVFLGIPIYASIKVVVKEIFEWYK 372 Query: 351 E 351 Sbjct: 373 R 373 >gi|257420008|ref|ZP_05597002.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257161836|gb|EEU91796.1| conserved hypothetical protein [Enterococcus faecalis T11] Length = 394 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVA 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|269202981|ref|YP_003282250.1| hypothetical protein SAAV_1339 [Staphylococcus aureus subsp. aureus ED98] gi|262075271|gb|ACY11244.1| hypothetical protein SAAV_1339 [Staphylococcus aureus subsp. aureus ED98] gi|269940856|emb|CBI49238.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|283470573|emb|CAQ49784.1| membrane protein YubA [Staphylococcus aureus subsp. aureus ST398] gi|298694658|gb|ADI97880.1| probable membrane protein [Staphylococcus aureus subsp. aureus ED133] gi|312829754|emb|CBX34596.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|323441143|gb|EGA98850.1| hypothetical protein SAO11_0210 [Staphylococcus aureus O11] gi|323444011|gb|EGB01622.1| hypothetical protein SAO46_0121 [Staphylococcus aureus O46] gi|329314036|gb|AEB88449.1| Membrane protein YubA [Staphylococcus aureus subsp. aureus T0131] gi|329727689|gb|EGG64145.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21172] gi|329730893|gb|EGG67269.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21189] gi|329733547|gb|EGG69875.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21193] Length = 382 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 139/358 (38%), Gaps = 16/358 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y F AP++ +LI+ + PI + + ++ Sbjct: 17 VLLGIVIFIFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGIS 76 Query: 64 V--IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + +A V V+ L + L+ + + S V + Q+ + + I + S Sbjct: 77 IIYLAVVGVITLIVNLLIPIIGSQVD------SLVKNSPQYLEKLINSIDKIANNTFFSS 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +++ SL + L F + A+ F + + I+ LFF +DG Sbjct: 131 YYSQINDWLNSLPKKIPSMLSEFTDGFGSKIAT-FAETIANIGVVIVTTPFVLFFMLKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ F + + + + S G I++ G++L Y + G+ Sbjct: 190 HHFKEFSTNIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYS 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L I A+ +++P P + +I + + + L + + F+ + P ++ Sbjct: 250 LVLASIAAVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +K+ L F L+ + +G++G+ +G A++ V+ K + N Sbjct: 310 GKTLKIHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGN 367 >gi|292491790|ref|YP_003527229.1| hypothetical protein Nhal_1718 [Nitrosococcus halophilus Nc4] gi|291580385|gb|ADE14842.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 377 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 103/300 (34%), Gaps = 9/300 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ + + + P+ K S T + TV + IV LL L ++ Sbjct: 28 LLPFVAGIAVAYLIDPLCDRLEDK-GWSRTVATSLVTVGFILAVIVVLLLLVPLLRNQIM 86 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + S P E W+ +S ++ + + + + Sbjct: 87 HLIEVLPSLIARVQD-----STWPWLQTLQERWSVDISQLETTAREQAGTVVSWIVQALG 141 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + S G+ + I + F+ RD ++ ++D L + ++ +++ +V Sbjct: 142 KLLSS-GLALANLLSLIFITPVVAFYLLRDWNNLVARVDDLLPRKYAPVIREQVKLIDRV 200 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G + + G L G+ + +G+ +++ IP I I L Sbjct: 201 LSGFIRGQASVCLLLGTFYAVGLTLIGLDFGLMVGMSAGLLSFIPYVGTIIGFIAGIGLA 260 Query: 271 IKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + G + + L P LVG + L + F L+ G G LG+ Sbjct: 261 FVQFSEWTPIALVAGVFVVGQILEGNFLTPRLVGTRVGLHPVMVIFALLAGGALFGFLGI 320 >gi|238061336|ref|ZP_04606045.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149] gi|237883147|gb|EEP71975.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149] Length = 459 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 117/337 (34%), Gaps = 18/337 (5%) Query: 13 RWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +++ ++ +L + P+ A+++ P + + + + V Sbjct: 115 RLIVIGVVFWALLKVVATISIVIIPLAVAMLLSALLAPAVGWLLRARFPR-SLATAVVLV 173 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + + EL K +++ + WL P + S+L Sbjct: 174 GGLAAVVGTLTLVVNEFIQGVPELSKK---SSEGVRQIQDWLKTGPLHLSDSQLDRYIEE 230 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + +E F A + I+ ++ A FFF RDG I + L Sbjct: 231 APTWINNNTERFTSG---------AVSTAATLAEVLTGIVLVLFATFFFLRDGNRIWRFL 281 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L R + + + ++A + + +G+ + +P L + Sbjct: 282 VRLLPVAARWKVDDAGRASWETLGAYVRATVLVAFIDAVGIGTFLVIFDIPFAFPLAALV 341 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP GA +S + L+ A + + L+P ++G + + Sbjct: 342 FLGAFIPIVGAALSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHVLQPLIMGRAVAI 401 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G+ GV G+ G + L+A++ + Sbjct: 402 HPLAVIIGIAAGVVLAGITGALVSVPLIAVLNTAVRR 438 >gi|69244433|ref|ZP_00602849.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|293559545|ref|ZP_06676080.1| hypothetical protein EfmE1162_0235 [Enterococcus faecium E1162] gi|293570139|ref|ZP_06681218.1| hypothetical protein EfmE1071_2681 [Enterococcus faecium E1071] gi|314948604|ref|ZP_07851980.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|68196374|gb|EAN10802.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|291587338|gb|EFF19223.1| hypothetical protein EfmE1071_2681 [Enterococcus faecium E1071] gi|291606497|gb|EFF35896.1| hypothetical protein EfmE1162_0235 [Enterococcus faecium E1162] gi|313644981|gb|EFS09561.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 424 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 81 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSIWLIPFL 138 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 139 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 198 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 199 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 253 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 254 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 313 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 314 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 372 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 373 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 404 >gi|294623323|ref|ZP_06702184.1| hypothetical protein EfmU0317_2584 [Enterococcus faecium U0317] gi|291597258|gb|EFF28448.1| hypothetical protein EfmU0317_2584 [Enterococcus faecium U0317] Length = 424 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 81 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSIWLIPFL 138 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 139 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 198 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 199 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 253 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 254 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 313 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 314 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 372 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 373 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 404 >gi|229076099|ref|ZP_04209067.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-18] gi|229099057|ref|ZP_04229991.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-29] gi|229118087|ref|ZP_04247446.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-3] gi|228665310|gb|EEL20793.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-3] gi|228684285|gb|EEL38229.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-29] gi|228706962|gb|EEL59167.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-18] Length = 346 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 118/331 (35%), Gaps = 12/331 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L+ V + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 147 D----------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q+ L + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYDWHRLAQKARKLLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G F IY+ G+ A L + + + + + + P ++ I L L T Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLATLVA 299 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L G + G LGL IGPV + L+ + K + Sbjct: 300 LFIGFKLFGFLGLIIGPVTLVLLNTLHKAHV 330 >gi|269928592|ref|YP_003320913.1| hypothetical protein Sthe_2677 [Sphaerobacter thermophilus DSM 20745] gi|269787949|gb|ACZ40091.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 468 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 113/337 (33%), Gaps = 17/337 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P + A + + P+ + + V + + V + + Sbjct: 31 VAHILPPFVWAAVTAYLLHPVVNRVQRGLRIPRPVAIAMVFVLIAGILGVVGVRVVPTLY 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ L++ + I G ++ E K Sbjct: 91 EQLRSLIASLPSLIDTARQELVRNERISIGGV--------TIDTAAINAQIEEVSKDVAA 142 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F R A + + + + ++ ++A ++F G + Q+L +L ++++S Sbjct: 143 RF-SREAPSLVLQTVGFLIHLLVYLLATYYFLLQGSRLVQRLSNLLPPRHHQTFERVSGQ 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V + I+ + A + V +AL + T + +IP P + ++ Sbjct: 202 VNATFGAYIRAQVILFAIMSVATFIALSILKVQYALALAIATGALELIPIIGPWTAGGIA 261 Query: 267 IYLLIKGNIFN--------ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + A + L + D + P LVG ++L L FG++ Sbjct: 262 VTVALSQGSTPFGWTPVQLAAVVGLTYLALRLMEDHFVIPQLVGRIVRLHPLMVIFGVLA 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G G LGL + L+A +I + ++ + Sbjct: 322 GASIGGALGLVLAVPLLAASKLIVLAVLEELRHPPAR 358 >gi|261406702|ref|YP_003242943.1| hypothetical protein GYMC10_2865 [Paenibacillus sp. Y412MC10] gi|261283165|gb|ACX65136.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 379 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 121/327 (37%), Gaps = 5/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K P++ + I+ + P+ +K + + +I + + + V +L + Sbjct: 50 LIKTIVLPIILSGILYYLLNPLVDMLERRKIKR-GWSILILYLLIAGILTVVVLAVIPVL 108 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L+ ++ L+ G + ++ + T T Sbjct: 109 RTQIMSLIDNFPTYSEKVRQQFEELT----GSQLYSQLQEAVNINSQEWWGTITQKATEI 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ F F + LSII + LF+ +DG + +++ S + + + Sbjct: 165 LNSTWSKVGGFLGAFTEIVLSIITVPFVLFYMLKDGKKLPRKILSYLPTQSRSGILHVLQ 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I S G I+++ G++L Y + G+ + L +I + +++P P Sbjct: 225 DINHQISSFIRGQIIVSVCIGILLYIGYMIIGLDYALILAIIASFTSVVPYLGPAIAITP 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I I K + P ++G +K+ + F ++ G+ Sbjct: 285 ALIVALVTSPVMLLKMVAVWTIVQLIEGKFISPQIMGKTLKIHPITIIFVILTAGNLFGV 344 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ + A++ V K Sbjct: 345 VGILLAVPGYAVLKVCVTHIFEWFKNT 371 >gi|257080808|ref|ZP_05575169.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988838|gb|EEU76140.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 394 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 111/334 (33%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PVL +I+ + P+ K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVLFGIILFYLLNPMVKRLEKKIP--RVWAIAILYVLIIALLVLAGLQLFP 102 Query: 84 YGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQAVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ + L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPTFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+G+ G + L+ V K+ + Sbjct: 341 LFGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|329578114|gb|EGG59526.1| hypothetical protein HMPREF9520_00101 [Enterococcus faecalis TX1467] Length = 394 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 108/318 (33%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++ I M LF+ +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVATITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|73662707|ref|YP_301488.1| putative permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495222|dbj|BAE18543.1| putative permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 408 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 128/355 (36%), Gaps = 15/355 (4%) Query: 11 IMRWMIMFIILVS---LYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESST 60 IM +I I + Y K F AP++ ++I+ + P+ + + + S Sbjct: 41 IMLILIGIAIFIFDQVSYIFKPFIIVFNTIVAPIIVSIILYYLFNPLVN-LMERYNISRL 99 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + +I + ++ + + + L + K + V +++ ++ S Sbjct: 100 WGVIILFLVIIGVIALAINLLIPVIGTQFKSFGNNFPHYVDK---VNQFIDNLTRNSLIS 156 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + +L + + F F ++ + I LFF +D Sbjct: 157 NFYGQIQEQLDALANKLPSMVSDYFNGF-GSKVKNFAEAIVNVGVVIATTPFVLFFMLKD 215 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L F + + + + S G I++ G++L Y + G+ Sbjct: 216 SHHFKEYSTKLMPPKFRKDYHDLLDKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDY 275 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L I A+ +++P P + +I + + + L + FI + P + Sbjct: 276 SLILASIAAVTSVVPYLGPTIAISPAIIIALITSPIMLLKLIIVWTAVQFIEGHFISPNI 335 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G +K+ L F L+ +G++G+ +G A++ V+ K K Sbjct: 336 MGKTLKIHPLTIIFILLSAGNLLGVVGVILGIPAYAILKVLVSHLYSMYKRRYNK 390 >gi|229548324|ref|ZP_04437049.1| permease [Enterococcus faecalis ATCC 29200] gi|256959606|ref|ZP_05563777.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|293384273|ref|ZP_06630161.1| putative membrane protein [Enterococcus faecalis R712] gi|293386996|ref|ZP_06631564.1| putative membrane protein [Enterococcus faecalis S613] gi|307288769|ref|ZP_07568747.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0109] gi|312906294|ref|ZP_07765305.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 512] gi|312909640|ref|ZP_07768494.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 516] gi|229306540|gb|EEN72536.1| permease [Enterococcus faecalis ATCC 29200] gi|256950102|gb|EEU66734.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|291078421|gb|EFE15785.1| putative membrane protein [Enterococcus faecalis R712] gi|291083538|gb|EFE20501.1| putative membrane protein [Enterococcus faecalis S613] gi|306500238|gb|EFM69577.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0109] gi|310627669|gb|EFQ10952.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 512] gi|311290042|gb|EFQ68598.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 516] gi|315166095|gb|EFU10112.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1302] Length = 394 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 114/334 (34%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PV+ +I+ + P+ K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVIFGIILFYLLNPMVKRLEKKIP--RVWAIAILYVLIIALLVLVGLQLFP 102 Query: 84 YGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + + + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ A+ L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+G+ G + L+ V K+ + Sbjct: 341 LFGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|229122455|ref|ZP_04251668.1| hypothetical protein bcere0016_27500 [Bacillus cereus 95/8201] gi|228661016|gb|EEL16643.1| hypothetical protein bcere0016_27500 [Bacillus cereus 95/8201] Length = 306 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 113/297 (38%), Gaps = 4/297 (1%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + ++ L V + + ++ +LV + + G ++ D+ Sbjct: 12 RNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEG---KVYIQDLSHHRL 68 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L T++ ++++ + +LK + + + A+ I + L I + LF+ + Sbjct: 69 FEWLSTQNYVSIETIEKNAIEYLK-DIPNTLTSSATALFGIITNVALVIFTVPFILFYMF 127 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + SL + +I + + + + G ++ I G Y++ + Sbjct: 128 KDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYFIIDL 187 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P LG+I A +IP P A ++ + + + A + + I + P Sbjct: 188 PYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISP 247 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 248 RIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSN 304 >gi|18977478|ref|NP_578835.1| hypothetical protein PF1106 [Pyrococcus furiosus DSM 3638] gi|18893179|gb|AAL81230.1| hypothetical protein PF1106 [Pyrococcus furiosus DSM 3638] Length = 326 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 137/346 (39%), Gaps = 34/346 (9%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +ILVSL +K FF+ A + + P+++ + E + L + Sbjct: 1 MRSSIVFGALGAVILILVSL-TVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQSALLL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + + ++ +L +L + + + + P+P+ +SD G++ Sbjct: 60 IFVLLAGAVVLMIILIYTLNPVLNQAYVYLQDIDSLISRAPLPKSISDAFLGIYH----- 114 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + F Y L + + +++F Sbjct: 115 -------------------QLAPRVQEYILSFTFSIPKYILQVAAYLAFVYYFLLH---- 151 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 + + L KKI +++ ++ I +G+++ + + V P+ Sbjct: 152 EKDIAKLIPFESDEKMKKILYRGNLTLQALIKAWLLLNIAKGILMTIGFIIFDVSSLPTA 211 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 + G++T + + IP + + A SIYLL G+ A L +GA + + D T+RP Sbjct: 212 ILAGIVTILFSFIPLFEGWMVWLAGSIYLLNSGHFIRAILLAAYGAALVSPLPDFTIRPK 271 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +V K G++GGV MGL GL IGP+++ + + +E Sbjct: 272 IVAKEAKFDETLVLIGMIGGVWAMGLKGLIIGPIVLNVAVEMLREW 317 >gi|75762049|ref|ZP_00741959.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899750|ref|YP_002448161.1| sporulation integral membrane protein YtvI [Bacillus cereus G9842] gi|74490456|gb|EAO53762.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541741|gb|ACK94135.1| sporulation integral membrane protein YtvI [Bacillus cereus G9842] Length = 372 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 13 IFVIVATIAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 73 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 132 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 133 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 192 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 193 WHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 252 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 253 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 312 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 358 >gi|229175304|ref|ZP_04302819.1| Sporulation integral membrane protein YtvI [Bacillus cereus MM3] gi|228608136|gb|EEK65443.1| Sporulation integral membrane protein YtvI [Bacillus cereus MM3] Length = 365 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV++ L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVILVLLNTLHKARV 351 >gi|222151264|ref|YP_002560420.1| hypothetical protein MCCL_1017 [Macrococcus caseolyticus JCSC5402] gi|222120389|dbj|BAH17724.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 380 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 128/342 (37%), Gaps = 20/342 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 I+ +++ I+ + K F PV+ A I+ + P+ + + + + + Sbjct: 25 ILTGILVLIVNQISFIFKPFIVIFNTVIGPVILAFILYYLLNPLVN-LMERYRINRLWGI 83 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----IPGGMWA 119 +I +++ LF + + +L +++ LV H + LS+ P Sbjct: 84 IILIATIISLFALLITWLIPVIEVQVTGLVHNAPDYLNHLLKDFNRLSNDSKFAPFLQNI 143 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E +LS L +L + I+ LFF + Sbjct: 144 QEWVNTNLSD---LPKKVGEYLGN-----FSTRLRSVVDTVASVAIVIMTFPFVLFFLLK 195 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + L F I + + S G +A G++L Y + G+ Sbjct: 196 DGEQFKNYVLKLTPPKFRKDLHDILDKMNVQVGSYIQGQMFVAFCIGVLLFIGYMIIGLE 255 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L I A+ +++P P+ + +I + + + F L + F+ + P Sbjct: 256 YALILACIAAVTSVVPYLGPMIAISPAIIIALVDSPFMLLKLAIVWMAVQFLEGHFISPN 315 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++G +++ L F L+ +GL+G+ +G L A++ V+ Sbjct: 316 IMGKTMQIHPLTIIFVLLCAGNLLGLIGVILGIPLYAILKVL 357 >gi|256853913|ref|ZP_05559278.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256710856|gb|EEU25899.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 389 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 60 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 114 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 115 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 174 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 175 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLIKFLPVKMRKPTLKVLAEVNDQVS 234 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 235 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 294 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 295 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 354 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 355 PVYAAAKVIITHIFEWYQ 372 >gi|49478696|ref|YP_038640.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140913|ref|YP_085916.1| permease [Bacillus cereus E33L] gi|118479743|ref|YP_896894.1| permease [Bacillus thuringiensis str. Al Hakam] gi|196040923|ref|ZP_03108221.1| sporulation integral membrane protein YtvI [Bacillus cereus NVH0597-99] gi|196047486|ref|ZP_03114697.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB108] gi|225866573|ref|YP_002751951.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB102] gi|49330252|gb|AAT60898.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974382|gb|AAU15932.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] gi|118418968|gb|ABK87387.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|196021701|gb|EDX60397.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB108] gi|196028377|gb|EDX66986.1| sporulation integral membrane protein YtvI [Bacillus cereus NVH0597-99] gi|225789224|gb|ACO29441.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB102] Length = 372 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 25 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 84 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 85 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 144 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 145 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 204 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 205 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 264 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 265 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 324 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|237785193|ref|YP_002905898.1| hypothetical protein ckrop_0588 [Corynebacterium kroppenstedtii DSM 44385] gi|237758105|gb|ACR17355.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length = 453 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 104/314 (33%), Gaps = 14/314 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ ++I+ WP K + A++ + + I L + + + + Sbjct: 92 LLPVMISIIVCTLLWPPVHWLTKHKVPHA-LSAIVVILGAAVIVIGTLSLVTTSVIDQSE 150 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L + + + L+ P + ++L ++ S + + + Sbjct: 151 SLAHRASHSLRET---KEALNGPPLNIKDAQLNQALDQAAAHIQEHSGSLVSSVLSGASA 207 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + ++ +++ FFF DG +D + +I K Sbjct: 208 ASSVAV---------TLGIVLMLTFFFLNDGHKFLPWIDRQFSGSIGTHLHEIFARSWKT 258 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + II+ + + + VP +AL V+ IP GA ++ + Sbjct: 259 LGGFIRAQAIISFLNSVFIAIGLSILHVPLALALAVLNFFCGFIPIFGALVAGAVAVVIA 318 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + +A L + I L P L + L + + G G++G F Sbjct: 319 FVANGWISALLTALLILLVHQIEGNVLSPILQSRAMNLHPVIILASVAIGGSVYGVVGAF 378 Query: 330 IGPVLMALIAVIWK 343 + L A+ AV+ + Sbjct: 379 LAVPLAAVGAVLLR 392 >gi|167630331|ref|YP_001680830.1| hypothetical protein HM1_2263 [Heliobacterium modesticaldum Ice1] gi|167593071|gb|ABZ84819.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1] Length = 360 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 114/320 (35%), Gaps = 3/320 (0%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P L +I P+ K S + + + L V L+ + ++EM Sbjct: 38 YLLPFLLGAMIALLIEPVVEFLTKKTGLSRGLTTFVTLLLFLGLVSVSLVVIISRLVVEM 97 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + S + W + + + + + +K + Sbjct: 98 VTIASSLPSPQFLTNAFTEWTKAVAPYYELIHSSPEIYTTVERIAGEGVVAVKNMAVSG- 156 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + F ++A +FF RD +I Q + + +++ + + Sbjct: 157 SNYLLDMITSLPSFFTILAFSLVASYFFSRDKGAILQLVYKVVPDDRAVQVRQVIVELGE 216 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I+ GL+ +L +G++T IM ++P G + F I+ Sbjct: 217 AFVGFVRAQVILVSITGLLTIIGLYLLDNEYAFTIGILTGIMDLLPILGPGLVFLPWIIW 276 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G A L + I + + + + P +V I L L T L G++ G++G+ Sbjct: 277 ELLSGQFPAAANLSILYGILV-LNRQFIEPKVVADSIGLHPLVTLTALYVGLKAFGVIGV 335 Query: 329 FIGPVLMALIAVIWKESIMA 348 IGP ++ L+ + + + Sbjct: 336 IIGPTIVLLLLSMHRAGVFK 355 >gi|206977140|ref|ZP_03238039.1| sporulation integral membrane protein YtvI [Bacillus cereus H3081.97] gi|217962076|ref|YP_002340646.1| sporulation integral membrane protein YtvI [Bacillus cereus AH187] gi|206744625|gb|EDZ56033.1| sporulation integral membrane protein YtvI [Bacillus cereus H3081.97] gi|217064824|gb|ACJ79074.1| sporulation integral membrane protein YtvI [Bacillus cereus AH187] gi|324328488|gb|ADY23748.1| sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar finitimus YBT-020] Length = 372 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 25 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 84 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 85 TEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 144 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 145 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 204 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 205 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 264 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 265 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 324 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|262368618|ref|ZP_06061947.1| PerM family permease [Acinetobacter johnsonii SH046] gi|262316296|gb|EEY97334.1| PerM family permease [Acinetobacter johnsonii SH046] Length = 406 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 130/354 (36%), Gaps = 9/354 (2%) Query: 6 LNPQGIMRWMIMF---IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + R I+ +IL LY LK P + A ++ + P+ K Sbjct: 1 MQDRTLKRIFILAGIALILWVLYLLKPVVLPFIGAFLVAYLFSPLVDKL-HKIGLPRWLS 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + +L ++ + +K + + ++L + + Sbjct: 60 ISAVFIGIGVVITLAFWYLVPLVWEQL--MYAKNSIPSGIHWANYKFLPWLSDSFNLVPM 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ +T + I + ++ G+ F+ +++ + I F+F D Sbjct: 118 ELDVDQISAAIMEYVQTNYSADSIQAMIAKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWD 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L + I + V+ + G ++ + G+V L G+ + Sbjct: 178 RMLDSFRRLIPRRYEEQTLVIVKECHSVLGAFVKGQFLVMVLLGVVYAMGLQLIGLEVGL 237 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKG-NIFNATCLFLWGAIELFIVDKTLRPF 299 +G++ + ++IP ++ L G + + + I + L+PF Sbjct: 238 IIGMVAGLCSIIPYLGFAVGIIAAVIASLFQFGIDWMQLLLVGVVFMIGQAVEGYILQPF 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G I L + F ++ G + G+LG+ I + A+I V+ + + + + Sbjct: 298 LLGDKIGLSPVAVVFAVLAGAQLGGILGMLIALPVAAVIVVLLRHAREFYENSP 351 >gi|326942380|gb|AEA18276.1| hypothetical protein CT43_CH4616 [Bacillus thuringiensis serovar chinensis CT-43] Length = 372 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 13 IFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 73 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 132 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 133 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 192 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 193 WHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 252 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 253 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 312 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 358 >gi|229005363|ref|ZP_04163077.1| hypothetical protein bmyco0002_23000 [Bacillus mycoides Rock1-4] gi|228755893|gb|EEM05224.1| hypothetical protein bmyco0002_23000 [Bacillus mycoides Rock1-4] Length = 348 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 124/330 (37%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L A+ + F P+ +KK + ++ V ++ L V + + Sbjct: 22 FISTLFFPILIAMFLYFIFNPVLVFLEAKKVPR-SLAILLLYVFIITLAAVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T+ ++++ + +LK Sbjct: 81 SQQLMDLVKNMPTYIKEG---KVYIQELSHHRLFEWLATQDYVSIETIEKNAIEYLKE-I 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + S + +I + Sbjct: 137 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G Y + +P LG+I A +IP P A Sbjct: 197 ETGETLSAYIQGQALVCLFVGAFTFIGYVIMDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQALWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVLILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + Sbjct: 317 IGMILAVPAYAVTKTVVSNLVRLFKMKRNN 346 >gi|29377087|ref|NP_816241.1| hypothetical protein EF2602 [Enterococcus faecalis V583] gi|257421813|ref|ZP_05598803.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294781398|ref|ZP_06746740.1| membrane family protein [Enterococcus faecalis PC1.1] gi|300860994|ref|ZP_07107081.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29344553|gb|AAO82311.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|257163637|gb|EEU93597.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294451525|gb|EFG19985.1| membrane family protein [Enterococcus faecalis PC1.1] gi|295113582|emb|CBL32219.1| Predicted permease [Enterococcus sp. 7L76] gi|300850033|gb|EFK77783.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] Length = 389 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 60 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 114 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 115 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 174 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 175 IGNFFGAVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 234 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 235 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 294 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 295 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 354 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 355 PVYAAAKVIITHIFEWYQ 372 >gi|163791064|ref|ZP_02185485.1| hypothetical protein CAT7_12140 [Carnobacterium sp. AT7] gi|159873709|gb|EDP67792.1| hypothetical protein CAT7_12140 [Carnobacterium sp. AT7] Length = 393 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 117/332 (35%), Gaps = 9/332 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 AP++ A I+ + PI + + + V+++ + + + F Sbjct: 46 IFSTLIAPLILAFILYYLLNPIVDWLE-RYKIKRIWGVTFLFVAIIGILVGLVALAFPPI 104 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ LV+ + G V W+ P AS+L ++ + + T Sbjct: 105 QDQVTSLVNNFPSYVDTIGTTVLGWVEGTPLENSASDLVEWLNGWVSNIPSVVVDYFDTA 164 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + I+ I FF +D + + F K I Sbjct: 165 VNGL-----TNIFSTVSNVVVVIVTFPIIAFFLLKDDEKFFSYVIKIISPKFRKDIKNIF 219 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + S G +I++ G+++ + + G+ L ++ ++IP GA ++ Sbjct: 220 ATINDQVGSYIKGQLMISLSLGIMMFIGFTIIGLEYAGVLAIVATFTSIIPYVGAALAMI 279 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I L + L + A+ FI + P ++G + + L L+ + Sbjct: 280 PAIIIALTT-SWVMVLKLLIVWAVVQFIDGNLVEPNIMGKNLNVHPLTIIIVLLVLGDLL 338 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GL +G + A+ VI K+ K Sbjct: 339 GFVGLVLGVPIYAISRVIATFVFRKFKQRYNK 370 >gi|167750104|ref|ZP_02422231.1| hypothetical protein EUBSIR_01073 [Eubacterium siraeum DSM 15702] gi|167656847|gb|EDS00977.1| hypothetical protein EUBSIR_01073 [Eubacterium siraeum DSM 15702] Length = 468 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 102/304 (33%), Gaps = 4/304 (1%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGM 117 I + + + + L + + LV+ + Q V + L + P Sbjct: 108 RVMSVAITMILALLILTGIIWVLLPQLIDTITMLVNNMPTYVTQVSDWVSQTLRNYPEVE 167 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGID-FIPRFASRFGMIFLDYCLSIIFMIIALFF 176 +T +S + + +E + N I I +F++ L + I L Sbjct: 168 AYVLQFTGGISDMLNNWLSTELLPQMNNIWNLISSNVMNIISVFMNLLLGFVIAIYFLNS 227 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + L L + +R V K G + + G+V + Sbjct: 228 KELFAAQFKKILYCLFKPKVATKIINSTREVNKSFGQFITGKILDSFIIGMVYVLLMSIF 287 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P V GV+ I +IP G I F + L++ + + I I Sbjct: 288 NMPYAVLCGVVMGIFCIIPYFGPFIGFIPCMLLLVLV-DPIQCIYFTIMVVIIQNIDGNV 346 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G L FG++ G G +GL IG L A++ K + E K+ Sbjct: 347 LAPKIIGDSTGLSSFWVIFGMLVGQGLFGFVGLIIGIPLFAVVYSFTKNRVKKRLEKKDL 406 Query: 356 ISSN 359 S + Sbjct: 407 PSDS 410 >gi|229105224|ref|ZP_04235873.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-28] gi|228678150|gb|EEL32378.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-28] Length = 367 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 122/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 305 VLSSNIGLDPLATLVALFIGFKLFGFLGLIIGPVTLVLLNTLHKAHV 351 >gi|170685913|ref|ZP_02877136.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0465] gi|196033171|ref|ZP_03100584.1| sporulation integral membrane protein YtvI [Bacillus cereus W] gi|218905823|ref|YP_002453657.1| sporulation integral membrane protein YtvI [Bacillus cereus AH820] gi|254687404|ref|ZP_05151260.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CNEVA-9066] gi|254724967|ref|ZP_05186750.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A1055] gi|170670377|gb|EDT21117.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0465] gi|195994600|gb|EDX58555.1| sporulation integral membrane protein YtvI [Bacillus cereus W] gi|218535804|gb|ACK88202.1| sporulation integral membrane protein YtvI [Bacillus cereus AH820] Length = 372 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 25 ALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 84 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 85 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 144 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 145 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 204 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 205 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 264 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 265 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 324 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|323353414|ref|ZP_08087947.1| permease [Streptococcus sanguinis VMC66] gi|322121360|gb|EFX93123.1| permease [Streptococcus sanguinis VMC66] Length = 365 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 123/344 (35%), Gaps = 17/344 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSETIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 T + G GL+G+ + A+I + +E ++ +E E Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEERNES 361 >gi|323481538|gb|ADX80977.1| PerM family permease [Enterococcus faecalis 62] Length = 389 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 60 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 114 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 115 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 174 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M LF+ +DG +++ L K+ V + Sbjct: 175 IGNFFGAVAMIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 234 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 235 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 294 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 295 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 354 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 355 PVYAAAKVIITHIFEWYQ 372 >gi|117164731|emb|CAJ88279.1| putative integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 363 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 122/327 (37%), Gaps = 14/327 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV AL++ +WP + F+ + A + TV+ + + + + + EL Sbjct: 47 PVAIALLLTTLTWP-SARFLRRHGWPPALAASVVTVAFLLTAVGVVALIAVPMSSQTDEL 105 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 VV + + W + P + +++ + + ++ + + T Sbjct: 106 TDGVVEGIER---LRDWAAGPPLNIGDAQITSAVDTAMARVQDSVGSMVSTVATGV---- 158 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 ++ ++ I + +FFF +DG L ++ + + Sbjct: 159 -----SAVVNGLITAILAVFLMFFFLKDGPRFLPWLTRQLPGRLSTDVPAVAARGWETLG 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 S ++ + + + +G W+ GVP + L V+T + A +P GA + + L+ Sbjct: 214 SFVRSQALVGLLDAVFIGLGLWILGVPLVLPLAVLTFVSAFVPIVGALFAGFVAVLIALV 273 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + +A + + + +P + + L + G G++G + Sbjct: 274 SNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHAAVILLAVTLGGSLAGVVGTLLA 333 Query: 332 PVLMALIAVIWKESIMAIKENKEKISS 358 + ALIAV+W + ++ E+ ++ Sbjct: 334 VPVAALIAVVWNYVRDQLGDHAEEPAA 360 >gi|30022672|ref|NP_834303.1| hypothetical protein BC4597 [Bacillus cereus ATCC 14579] gi|206969761|ref|ZP_03230715.1| sporulation integral membrane protein YtvI [Bacillus cereus AH1134] gi|218233703|ref|YP_002369392.1| sporulation integral membrane protein YtvI [Bacillus cereus B4264] gi|296505068|ref|YP_003666768.1| hypothetical protein BMB171_C4239 [Bacillus thuringiensis BMB171] gi|29898231|gb|AAP11504.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206735449|gb|EDZ52617.1| sporulation integral membrane protein YtvI [Bacillus cereus AH1134] gi|218161660|gb|ACK61652.1| sporulation integral membrane protein YtvI [Bacillus cereus B4264] gi|296326120|gb|ADH09048.1| hypothetical protein BMB171_C4239 [Bacillus thuringiensis BMB171] Length = 372 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 13 IFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 73 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 132 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 133 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 192 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 193 WHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 252 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 253 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 312 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 358 >gi|227550549|ref|ZP_03980598.1| possible permease [Enterococcus faecium TX1330] gi|227180450|gb|EEI61422.1| possible permease [Enterococcus faecium TX1330] Length = 362 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 115/334 (34%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 30 FFSTLFAPVLIAGFLYYLLNPI-VKLLMKAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 89 VQQISSLASSMPDFIKQVESWLKEVAELPVFKEVD------INKYFEQLDISYGTIIQQF 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 143 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 203 QLNKTLANYISGQAIECLFVGTFTFLGYMIIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + I + A L I + + P ++G +K+ L L+ GL Sbjct: 263 AFLVTIFNDPIKALLCCLVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 322 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I IKE+K+ + Sbjct: 323 LGIFLGVPFYAICKTIISYIIKIIKEDKQNENKK 356 >gi|326202550|ref|ZP_08192418.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] gi|325987134|gb|EGD47962.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] Length = 394 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 110/312 (35%), Gaps = 20/312 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L ++ + PI S + ++A V + + L+ L Y Sbjct: 44 FVYSIIFPILFGGLLYYILRPIVSMLEKARVPH-----ILAIVLAFVIVLSALILLSSY- 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +PV ++ S + + + + Sbjct: 98 ---TGSIIKSQFDDFAKSLPVLYKQAENTVNNLLSSNLLSYFNDSN----FQTSDIADKV 150 Query: 146 IDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +F+ A G L + +I I + I LF+F +DG + Sbjct: 151 SNFLQSLAKSVGKNTLSFIGAITNIGSVIIILPIILFYFLKDGNKFMPSVVRFLPASQKD 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +KI + V+ + G ++A GL++ Y + G+ + L + I +IP Sbjct: 211 NMRKILTDIDFVLSNYIAGQLLVAFFIGLLMYIGYLIIGLKYSLLLAIFAMITCIIPFFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I L + N F A +FL I I + + P ++ + + L L+G Sbjct: 271 PWIGIVPAILLSLADNPFMAVKIFLVMTIVQQIDNNLISPQVMKKSMDIHPLTVILLLMG 330 Query: 319 GVRTMGLLGLFI 330 + G +GL I Sbjct: 331 ILPIFGFVGLII 342 >gi|167633918|ref|ZP_02392241.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0442] gi|254741741|ref|ZP_05199428.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Kruger B] gi|167530719|gb|EDR93421.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0442] Length = 372 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 25 ALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 84 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 85 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 144 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 145 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 204 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 205 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVID 264 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 265 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 324 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|228991726|ref|ZP_04151666.1| hypothetical protein bpmyx0001_24740 [Bacillus pseudomycoides DSM 12442] gi|228768049|gb|EEM16672.1| hypothetical protein bpmyx0001_24740 [Bacillus pseudomycoides DSM 12442] Length = 357 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 124/330 (37%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L A+ + F P+ +KK + ++ V ++ L V + + Sbjct: 31 FISTLFFPILIAMFLYFIFNPVLVFLEAKKVPR-SLAILLLYVFIITLAAVAIGVVVPTI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T+ ++++ + +LK Sbjct: 90 SQQLMDLVKNMPTYIKEG---KVYIQELSHHRLFEWLATQDYVSIETIEKNAIEYLKE-I 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + S + +I + Sbjct: 146 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPESYREEGLRIIK 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G Y + +P LG+I A +IP P A Sbjct: 206 ETGETLSAYIQGQALVCLFVGAFTFIGYVIMDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 266 AVIVGLFVSPMQALWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVLILGVGNFAGI 325 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + Sbjct: 326 IGMILAVPAYAVTKTVVSNLVRLFKMKRNN 355 >gi|38234671|ref|NP_940438.1| putative integral membrane protein [Corynebacterium diphtheriae NCTC 13129] gi|38200935|emb|CAE50652.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 426 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 118/338 (34%), Gaps = 18/338 (5%) Query: 11 IMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++I+ I + + + PV+ A+++ WP SKK VI Sbjct: 42 ALRFIIVAIASIMAWRGLGTVWHGVLPVILAILLSTVLWPPVRWLRSKKVP-PALAVVIV 100 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + K+LV + + W + P + S++ Sbjct: 101 ILGFFGIIGGIFAAMAPSVGAQSKDLVDRASDGINR---LLDWAENSPFDIDTSQIDGYL 157 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +LK S +++I M+I FFF +DG Sbjct: 158 SNITNTLKEQSSNIANGVFTGL---------STASTILVTMILMLILSFFFLKDGTRFLP 208 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + ++ + + I+++ + +++G + VP + L V Sbjct: 209 MVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQAIVSLVDAVLIGVGLLILKVPLALVLAV 268 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T IP GA + + L+ + NA + + I L+P L + Sbjct: 269 LTFFGGFIPIVGAFTAGALAVVIALVSNGMSNALMVLVLIIAVQQIEGHILQPVLQSKAM 328 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G++G F+ + A +AV+ + Sbjct: 329 NLHAAVVLLSVTVGSTLFGVIGAFLAVPVAATLAVLVR 366 >gi|228910420|ref|ZP_04074235.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 200] gi|228849186|gb|EEM94025.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 200] Length = 344 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 120/331 (36%), Gaps = 12/331 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L+ V + + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 147 D----------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q+ L + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYDWHRLAQKARKLLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G F IY+ G+ A L + + + + + + P ++ I L L T Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLATLVA 299 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L G + G LGL IGPV + L+ + K ++ Sbjct: 300 LFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 330 >gi|327468532|gb|EGF14011.1| permease [Streptococcus sanguinis SK330] Length = 364 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 125/347 (36%), Gaps = 17/347 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEEFLDKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A + I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQVVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 T + G GL+G+ + A+I + +E ++ +E K + Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKALVKE 364 >gi|81429080|ref|YP_396080.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K] gi|78610722|emb|CAI55773.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K] Length = 368 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 110/316 (34%), Gaps = 7/316 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A ++ + P+ + K +A+I V + + + Sbjct: 40 FISTLFGPIIGAGLLFYLFNPLINLLGKLKISRKWAIAIIFIVFFGGIIFI-VALAIPQL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++V+ + + +S P + L + + Sbjct: 99 IHQVTQVVTNLPDYVHRLQDMIDKISTNPHLKNID-----VNKYVNQLDLKPSKIAENIM 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F F S G + + + + I LF+ +DG + + + + + R Sbjct: 154 KSFTSGFGSMIGAVT-SVTIGVFTVPIMLFYMLKDGHRLIPNIQKMLPDRYNDQVADLLR 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I + G + + G+ Y + G+P LG I + +IP P A Sbjct: 213 KMGATISAYIGGQALECLFVGVFTFIGYLIIGMPYAYLLGFIAGVSNIIPYLGPYIGIAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + +I + + I I + P ++G + + L L+ G+ Sbjct: 273 ALIISLSISIPKTIMVIVVVVIVQQIDGNLIYPNVIGRSLDIHPLTIIIILLVAGNIYGI 332 Query: 326 LGLFIGPVLMALIAVI 341 LG+ + A+ + Sbjct: 333 LGMILAIPFYAVTKTV 348 >gi|325697596|gb|EGD39481.1| permease [Streptococcus sanguinis SK160] Length = 366 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 127/348 (36%), Gaps = 17/348 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRIPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T + G GL+G+ + A+I + +E ++ +E K + S++ Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKAEGSAS 365 >gi|153009887|ref|YP_001371102.1| hypothetical protein Oant_2560 [Ochrobactrum anthropi ATCC 49188] gi|151561775|gb|ABS15273.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 644 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 121/360 (33%), Gaps = 20/360 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R P + M + + LYF K F P+ A+++ F PI + ++ Sbjct: 11 VRPITSAPPRLPTLAAMAVAVAILYFAKDVFLPLAIAVLLTFALAPIVAFL--RRAGLPR 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS--------------KVVLANQHGIPV 106 AVI +V+ L + + + + E+ + +S + N + Sbjct: 69 LFAVITSVAGGFLIVAVFSAVVAFQVSEVGQNISIYQYNIIEKIRTLKEASSDNSFFDRL 128 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 R+ I G + K + P ++ + + Sbjct: 129 NRFAERI--GTEINRPEQKTQALPSDQPEEKPLLVQIFAPRHPVETLRSIIEPLVGPLAT 186 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +++ + F + + + L + + + K + L ++ I G Sbjct: 187 TGLVVVVVIFMLLEREELRDRFIRLVGYGDLHRTTEALQDAGKRVGQYLLTQLVVNITYG 246 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + L W+ G+P+ G++ ++ +P P+ + ++L + L+ G Sbjct: 247 VPLAFGLWILGIPNAALWGMLAIVLRFVPYIGPVIAAILPLFLAFAVAPGWSLLLWTIGL 306 Query: 287 IEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +++ + P+L G L L + G +GL + L + V+ + Sbjct: 307 FVIIELLINNVIEPWLYGSRTGLSPLAIIVSAIFWTWLWGPVGLVLSTPLTVCLVVLGRH 366 >gi|282879126|ref|ZP_06287885.1| membrane family protein [Prevotella buccalis ATCC 35310] gi|281298768|gb|EFA91178.1| membrane family protein [Prevotella buccalis ATCC 35310] Length = 372 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 139/356 (39%), Gaps = 19/356 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++F +L + +L G P A + + +P+ K +A+I T+ + + Sbjct: 18 LLLIFFVLYLVNYLSGVLLPFFVAWLFAYLLYPLVKFVQYKMHVKVRAIAIIITMLAVAV 77 Query: 74 FIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 I L++ M+E + ++++ + + H + ++S W ++ T+ S Sbjct: 78 VIGGLVYAIIPPMIEQFGKLNDILNNWINQSTHSSDLGSYISQ-----WITKNRTEIESF 132 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +S + G+ + + + + S+I ++ FF +D ++ Sbjct: 133 MKSKDFSD---ILKTGMPKVFTLLGQTASVVISIIASLITLLYT-FFILQDYEFLTDNWI 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +W+++ + V + + + G ++++ G++ G + P +ALG++ Sbjct: 189 RIFPKKNRPFWEELMKDVERELNNYIRGQGLVSLILGILFGIGLSIINFPMAIALGIMMG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG------AIELFIVDKTLRPFLVGG 303 M ++P ++ + ++K ++G I I D L P ++G Sbjct: 249 FMNLVPYLHTLALVPMVFLSMLKAADTGQNFWIVFGLAMLVFLIVQVISDTVLTPKIMGK 308 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L L +G +GL + L L+ W++ + K+ E Sbjct: 309 AMNLNPAILLLSLSVWGTLLGFIGLIVALPLTTLLIAYWQKYVTREKKQDETTQEQ 364 >gi|322386253|ref|ZP_08059885.1| permease [Streptococcus cristatus ATCC 51100] gi|321269715|gb|EFX52643.1| permease [Streptococcus cristatus ATCC 51100] Length = 364 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 124/342 (36%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLDKCRVPQKLQRSLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A + I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQLVQLIEGNIIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G GL+G+ + A+I + +E ++ +E + Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEAE 359 >gi|227542503|ref|ZP_03972552.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181701|gb|EEI62673.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 469 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 120/337 (35%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +++ + + + + + G PV AL+I WP + + + A++ Sbjct: 68 LRLLVIGVTVYAGWRILGALWQGVLPVALALLISSVLWPPAAWLKRHRLP-AWLAALVTM 126 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V+ F + + + + L + V A Q + W + P + + + Sbjct: 127 ITVLGAFSAIIALIAPGVARQSQTLYFQSVDAIQR---LQLWAQEPPLSLKGEDF---NR 180 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ + + G F A+ + +I FF +DG Sbjct: 181 IFGEAVAWIQQQAGNIAGGVFAGLGAAS------SLLVLATITLIITFFVLKDGERFMPW 234 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ + + ++A+ + +++G + +P +AL + Sbjct: 235 ARAFTGRQVGWHLTELLTRCWNTLSNYIRVQALVALIDAVLIGLGLVVMKIPMALALATL 294 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + +P GA ++ T L+ + A + + I + L P L + Sbjct: 295 TFVAGFVPIVGAFVAGTVAVAIALVTMGLTKALMVLILILIVQQLEGNVLSPMLQSKAMN 354 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G + + A +AV+ + Sbjct: 355 LHPAVVILVVTVGGGLFGIAGALLAVPITATVAVLLR 391 >gi|311747682|ref|ZP_07721467.1| putative transporter [Algoriphagus sp. PR1] gi|126575670|gb|EAZ79980.1| putative transporter [Algoriphagus sp. PR1] Length = 362 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 123/344 (35%), Gaps = 17/344 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL-KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + +I I+LV + K P+ P+ + ++K T + Sbjct: 8 MPPYLKALSVLIFIIVLVFFLIVGKSLLVPLFMGGFFAVLFTPLSNWLEARKVPR-TLSS 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VI+ + + L + + F+ + + + V W Sbjct: 67 VISLIINITLVVGFVAFIISTVANFTNDFDNVSEKLTSYAKEVDEW--------TYENFG 118 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ +T L+ N + G + + + +FFF Sbjct: 119 IDENLDEKASNDFIKTVLQENSKNITGFALKTVGSLSGSILIPVF-----MFFFLLYRDH 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++ + + P + + K+++S +G+ + ++ +A+ G+ + Sbjct: 174 LTEVMIRIYRDKDPQLVRMRITSLRKLLQSYVIGVLKVMGILAVLNVTAFTALGIKHAIF 233 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I A + +IP P+ + L K ++F + + I L P +V Sbjct: 234 FGLIAAFLNIIPYVGPLVGAMMPMIYSFLTKDSLFYPIAVLASYQLIQLIEGNILTPKIV 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 GG + L TF GL+ G G+ G+ + ++A++ I++ S Sbjct: 294 GGNVNLNPFITFLGLLVGASIWGIAGMILIIPVLAILREIFELS 337 >gi|229147156|ref|ZP_04275514.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST24] gi|228636266|gb|EEK92738.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST24] Length = 344 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 120/331 (36%), Gaps = 12/331 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L+ V + + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 147 D----------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q+ L + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYDWHRLAQKARKLLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G F IY+ G+ A L + + + + + + P ++ I L L T Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLATLVA 299 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L G + G LGL IGPV + L+ + K ++ Sbjct: 300 LFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 330 >gi|239831560|ref|ZP_04679889.1| Hypothetical protein OINT_1000763 [Ochrobactrum intermedium LMG 3301] gi|239823827|gb|EEQ95395.1| Hypothetical protein OINT_1000763 [Ochrobactrum intermedium LMG 3301] Length = 644 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 118/360 (32%), Gaps = 20/360 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R P + M + + LYF K F P+ A+++ F PI + ++ Sbjct: 11 VRPITSAPPRLPTLAAMAVTVAILYFAKDVFLPLAIAVLLTFALAPIVAFL--RRAGLPR 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKE--------------LVSKVVLANQHGIPV 106 AVI +V+ L + + + + E+ + + + N + Sbjct: 69 LFAVITSVAGGFLIVAVFSAVVAFQVSEVAQNVTYYQYNIIEKIRTLKEAGSDNSFFDRL 128 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + I G + K + P ++ + + Sbjct: 129 NSFAERI--GTEINRPEQKTQALPSDEPEEKPLLVQIFAPRHPVETLRSIIEPLIGPLAT 186 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +++ + F + + + L + + + K + L ++ I G Sbjct: 187 TGLVVVVVIFMLLEREELRDRFIRLVGYGDLHRTTEALQDAGKRVGQYLLTQLVVNITYG 246 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + L W+ G+P+ G++ ++ +P P+ + ++L L+ G Sbjct: 247 VPLAFGLWILGIPNAALWGMLAIVLRFVPYIGPVIAAILPLFLAFAVAPGWNLLLWTIGL 306 Query: 287 IEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +++ + P+L G L L + G +GL + L + V+ + Sbjct: 307 FVVIELLINNVIEPWLYGSRTGLSPLAIIVSAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 366 >gi|304407429|ref|ZP_07389081.1| sporulation integral membrane protein YtvI [Paenibacillus curdlanolyticus YK9] gi|304343380|gb|EFM09222.1| sporulation integral membrane protein YtvI [Paenibacillus curdlanolyticus YK9] Length = 371 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 129/354 (36%), Gaps = 12/354 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M +GI +++ + ++++ ++ P L I+ + P+ SK Sbjct: 6 AMRAWRGIFVAVMLVLFVLAVMYVTPLVYPFLIGWILAYALNPLIRFLQSKARLPRWLAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKEL-------VSKVVLANQHGIPVP---RWLSDI 113 ++ + + + + L + E+ L ++ I P ++ I Sbjct: 66 TLSLLLFVTAAVTIVSALITRIVAEIIHLSQSINGTINWWRDEFNKFIATPEMQDLINKI 125 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + + + +++ + ++ + + S + + ++ ++++ Sbjct: 126 SAFYNENPKYQQPINNKIADTANLLAQTSSDLVTYFFNGLSNLLISLPNVLTIMVVVLLS 185 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF +D S L + + K + I+ +V+ Sbjct: 186 SFFIGKDWHKHSATLGGWLPEGIRKSMATVWTDLQKALFGYLRSQFIMISITAVVVIIGL 245 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L GV + +G++ ++ ++P G Y + G++ L + + L + Sbjct: 246 LLLGVQYAITIGLLIGLVDLLPYLGVGAVMVPWIAYTFLYGDLSLGIGLSILYGVIL-VA 304 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + P ++ + L LPT + G++ G+LGL IGPV + ++ + ++ Sbjct: 305 RQMIEPKVLASSVGLDPLPTLIAMFVGLKLFGVLGLIIGPVSLVILFAFHRANV 358 >gi|228923341|ref|ZP_04086629.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836295|gb|EEM81648.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 365 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 130/351 (37%), Gaps = 16/351 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+R + + + V+ +++ + + ++ II F + + ++ + F +A + Sbjct: 2 ILRLIFVIVATVAGFYVLLYISGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVS 61 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L ++ L Y + E + ++ P + L+ +S Sbjct: 62 LILVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKF 121 Query: 131 QSLKILSETFLKTNGIDF--------------IPRFASRFGMIFLDYCLSIIFMIIALFF 176 L + N + I + F ++F+++A FF Sbjct: 122 NHLGEPQRYTITQNIQNLGTEATTQMKELLTTIISGLTNFISALPTTLTVLVFILLATFF 181 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++Q+ L + Y K I + K + + +++ + Sbjct: 182 ISYDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLIL 241 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + + +IT ++ ++P G F IY+ G+ A L + + + + + Sbjct: 242 RVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQI 300 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 301 MEPKVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|327459002|gb|EGF05350.1| permease [Streptococcus sanguinis SK1057] Length = 365 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 123/344 (35%), Gaps = 17/344 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRIPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 T + G GL+G+ + A+I + +E ++ +E E Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEERNES 361 >gi|300772564|ref|ZP_07082434.1| permease [Sphingobacterium spiritivorum ATCC 33861] gi|300760867|gb|EFK57693.1| permease [Sphingobacterium spiritivorum ATCC 33861] Length = 396 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 115/332 (34%), Gaps = 15/332 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ +Y + P+L ++II T +PI + K + A+++ + + + Sbjct: 18 LFALVLIIALMYVTQSVLVPLLFSIIISITLFPIANFLERKLHFVRSLAAIVSVIIAILI 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + F+ + E + + + V G + + S + Sbjct: 78 IGGLIWFI----VHESIIIGKDATDITKKVMSVVESFQSWVEGRFGVQR-----SEMAAQ 128 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + N ++ G L IF+ L+ YRD + Sbjct: 129 FQEQSNKMLNNVGGYLSTAFGSIGSTLAGMVLVPIFIFFLLY--YRD--FFKEFFFKAFP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + +VI+S FLG+ + ++ + G+ G + + + + Sbjct: 185 NTENQKVHGVLNRIYEVIQSYFLGLVTVMGIVAVLNTVGLMIMGIEYAWFFGSLASFLML 244 Query: 254 IPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P L K N + A + W + F+ + P +VGG + + L Sbjct: 245 LPYIGIAIGSILPALFALATKDNAWYAIGVIAWFQVVQFLEGNIITPNIVGGKVSINPLM 304 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G GL GL + + A + VI+ Sbjct: 305 AIIAILIGGMIFGLAGLILALPMTAALKVIFD 336 >gi|254823821|ref|ZP_05228822.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|293593043|gb|EFG00804.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 378 Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 122/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL D+ + Sbjct: 76 SVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQDLSNNSALKD 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 133 L---DIKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|49187485|ref|YP_030738.1| hypothetical protein BAS4490 [Bacillus anthracis str. Sterne] gi|165869655|ref|ZP_02214313.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0488] gi|167638139|ref|ZP_02396417.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0193] gi|170705406|ref|ZP_02895870.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0389] gi|177651155|ref|ZP_02933986.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0174] gi|190569043|ref|ZP_03021943.1| sporulation integral membrane protein YtvI [Bacillus anthracis Tsiankovskii-I] gi|227817381|ref|YP_002817390.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CDC 684] gi|229603687|ref|YP_002868875.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0248] gi|254736704|ref|ZP_05194410.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Western North America USA6153] gi|254754661|ref|ZP_05206696.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Vollum] gi|254757493|ref|ZP_05209520.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Australia 94] gi|49181412|gb|AAT56788.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|164714484|gb|EDR20003.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0488] gi|167513956|gb|EDR89324.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0193] gi|170129531|gb|EDS98394.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0389] gi|172082981|gb|EDT68043.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0174] gi|190559825|gb|EDV13810.1| sporulation integral membrane protein YtvI [Bacillus anthracis Tsiankovskii-I] gi|227005027|gb|ACP14770.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CDC 684] gi|229268095|gb|ACQ49732.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0248] Length = 372 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 25 ALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 84 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 85 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 144 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 145 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISNDWHRLAQKVRKFL 204 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 205 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 264 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 265 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 324 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|154687289|ref|YP_001422450.1| YueF [Bacillus amyloliquefaciens FZB42] gi|154353140|gb|ABS75219.1| YueF [Bacillus amyloliquefaciens FZB42] Length = 450 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 117/324 (36%), Gaps = 13/324 (4%) Query: 25 YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + + FF P+L + I+ F PI K T ++ + + L Sbjct: 110 FIFQPFFGFITTLFFPILISGILFFIFNPIVRLLEKKIP--RTLAILLIYLVFIGLIAFM 167 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + ++ L++ + LS W + + T+ + ++ Sbjct: 168 FTAIGPIVASQVTGLINNFPDYIHQIQVLTAQLSH---SKWFTWMMTQDYVSIEKIQQSL 224 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 FL++ + ++ FG++ + L +I + LF+ +DG + + Sbjct: 225 TGFLQSLPQNITASLSAVFGVVT-NITLVVITVPFILFYMLKDGRRFPLLAVKILPTSYR 283 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A +KI + + + F G +I + G Y + G+ + LG++ A+ +IP Sbjct: 284 AEGRKIFNDLYVTLAAYFQGQLLICLFVGTACFIGYSIIGLQYALILGMVIAVTNIIPYL 343 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + A + + + L P ++G + L L+ Sbjct: 344 GPFLGAAPAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILLLI 403 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G G+L + + + A++ Sbjct: 404 GAGSFGGILAMILAVPVYAVLKAF 427 >gi|229032241|ref|ZP_04188214.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1271] gi|228729021|gb|EEL80024.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1271] Length = 365 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 121/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|46907143|ref|YP_013532.1| hypothetical protein LMOf2365_0930 [Listeria monocytogenes str. 4b F2365] gi|47092118|ref|ZP_00229911.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|226223528|ref|YP_002757635.1| membrane protein [Listeria monocytogenes Clip81459] gi|254852403|ref|ZP_05241751.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254931293|ref|ZP_05264652.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|254993201|ref|ZP_05275391.1| membrane protein [Listeria monocytogenes FSL J2-064] gi|300764118|ref|ZP_07074113.1| hypothetical protein LMHG_10093 [Listeria monocytogenes FSL N1-017] gi|46880410|gb|AAT03709.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019558|gb|EAL10298.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|225875990|emb|CAS04696.1| Putative membrane protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605710|gb|EEW18318.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293582843|gb|EFF94875.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|300515108|gb|EFK42160.1| hypothetical protein LMHG_10093 [Listeria monocytogenes FSL N1-017] gi|328467003|gb|EGF38102.1| membrane protein [Listeria monocytogenes 1816] gi|328475390|gb|EGF46159.1| membrane protein [Listeria monocytogenes 220] Length = 378 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 122/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL D+ + Sbjct: 76 SVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQDLSNNSALKD 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 133 L---DIKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|301056100|ref|YP_003794311.1| putative transmembrane protein [Bacillus anthracis CI] gi|300378269|gb|ADK07173.1| putative transmembrane protein [Bacillus cereus biovar anthracis str. CI] Length = 372 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 25 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 84 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 85 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 144 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q+ L Sbjct: 145 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKARKLL 204 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 205 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 264 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 265 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 324 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|229072098|ref|ZP_04205307.1| Sporulation integral membrane protein YtvI [Bacillus cereus F65185] gi|228711032|gb|EEL62998.1| Sporulation integral membrane protein YtvI [Bacillus cereus F65185] Length = 365 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ L Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATLAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 305 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|261206759|ref|ZP_05921450.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289566440|ref|ZP_06446866.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|260078889|gb|EEW66589.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161761|gb|EFD09635.1| conserved hypothetical protein [Enterococcus faecium D344SRF] Length = 393 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 50 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 107 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 108 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 167 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 168 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 222 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 223 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 283 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 341 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 342 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 373 >gi|315150243|gb|EFT94259.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0012] Length = 394 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 113/334 (33%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PVL +I+ + P+ K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVLFGIILFYLLNPMVKRLEKKIP--RVWAIAILYVLIIALLVLAGLQLFP 102 Query: 84 YGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + + + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ + L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPTFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVIKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+G+ G + L+ V K+ + Sbjct: 341 LFGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|77411721|ref|ZP_00788059.1| membrane protein, putative [Streptococcus agalactiae CJB111] gi|77162229|gb|EAO73202.1| membrane protein, putative [Streptococcus agalactiae CJB111] Length = 396 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 130/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +D+ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD + + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRKMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|297623384|ref|YP_003704818.1| hypothetical protein Trad_1150 [Truepera radiovictrix DSM 17093] gi|297164564|gb|ADI14275.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 390 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 131/358 (36%), Gaps = 18/358 (5%) Query: 12 MRWMIMFI-ILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +I+ + ++LY L + + L AL++ + P+ ++ + +++I T Sbjct: 13 LRALIIVAGVALALYVLNLTRLAWRSFLIALLVAYLVNPLLVRLERRRVPRAVGVSLIMT 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + + LL L + +L + +P WL W L Sbjct: 73 ALVLFVIVA-LLLLSSILV----DLAQLPAALGRSLTQLPSWLQSEDPPEWLQNLNLLAD 127 Query: 128 SHPQSLKILSETFLKTNGIDFI-------PRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L S+ L+ N ++++ R + + ++ + + + F Sbjct: 128 NQQELLVFWSD--LRQNVLNWLELNARTLVRQIIQGTQGLVTGFFNLFILFVFIAFTMAG 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I Q L L + + + + + A +V + L GVP+ Sbjct: 186 FPTIRQSLYELFPERRQPLARDLGMKLDAAVGGYLRAKVLEAGIMFVVSATVLSLLGVPN 245 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG+I A++ +P PI T + + + + A L I L P L Sbjct: 246 PLALGLINAMLNPVPYIGPIIATMIEALVALTVSWQLALITALVMFAIEQIDGNILGPML 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + + + + G G G+ + A + +++++ + + SS Sbjct: 306 LSKGVDVHPVAILSAVTAGGALFGFWGVITAIPVTAFLQLLYRDYYKTSAWYRRRTSS 363 >gi|47565007|ref|ZP_00236050.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47557793|gb|EAL16118.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 365 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|251810791|ref|ZP_04825264.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|251805719|gb|EES58376.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|329735852|gb|EGG72131.1| putative membrane protein [Staphylococcus epidermidis VCU028] Length = 405 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 133/363 (36%), Gaps = 22/363 (6%) Query: 11 IMRWMIMFIILVSL----YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESS 59 ++ +++ I++ Y + F AP++ +L++ + PI + + Sbjct: 35 LIALVLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYRIPR- 93 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + +++ + + L + + S++ ++ ++ + Sbjct: 94 -------LLGITIIYVAIIGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNN 146 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + ++ ++ + + D+ + F + + I LFF Sbjct: 147 NTILSGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFF 206 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + F + + + + S G I++ GL+L Y + Sbjct: 207 MLKDGHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSII 266 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+ + L I A+ +++P P + +I + I + L + + F + Sbjct: 267 GLKYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFI 326 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P ++G +K+ L F L+ MG++G+ IG L A++ V+ M K + Sbjct: 327 SPNVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRRYNRY 386 Query: 357 SSN 359 N Sbjct: 387 YGN 389 >gi|15901352|ref|NP_345956.1| hypothetical protein SP_1505 [Streptococcus pneumoniae TIGR4] gi|15903400|ref|NP_358950.1| hypothetical protein spr1357 [Streptococcus pneumoniae R6] gi|116517014|ref|YP_816794.1| hypothetical protein SPD_1332 [Streptococcus pneumoniae D39] gi|148984848|ref|ZP_01818101.1| hypothetical protein CGSSp3BS71_09436 [Streptococcus pneumoniae SP3-BS71] gi|148988549|ref|ZP_01819982.1| hypothetical protein CGSSp6BS73_08494 [Streptococcus pneumoniae SP6-BS73] gi|148992611|ref|ZP_01822279.1| hypothetical protein CGSSp9BS68_04385 [Streptococcus pneumoniae SP9-BS68] gi|148997435|ref|ZP_01825040.1| hypothetical protein CGSSp11BS70_01067 [Streptococcus pneumoniae SP11-BS70] gi|149003282|ref|ZP_01828178.1| hypothetical protein CGSSp14BS69_02714 [Streptococcus pneumoniae SP14-BS69] gi|149008127|ref|ZP_01831658.1| hypothetical protein CGSSp18BS74_08355 [Streptococcus pneumoniae SP18-BS74] gi|149021771|ref|ZP_01835778.1| hypothetical protein CGSSp23BS72_09413 [Streptococcus pneumoniae SP23-BS72] gi|168483886|ref|ZP_02708838.1| transport protein [Streptococcus pneumoniae CDC1873-00] gi|168489665|ref|ZP_02713864.1| transport protein [Streptococcus pneumoniae SP195] gi|168493404|ref|ZP_02717547.1| transport protein [Streptococcus pneumoniae CDC3059-06] gi|168575960|ref|ZP_02721875.1| transport protein [Streptococcus pneumoniae MLV-016] gi|169832381|ref|YP_001694911.1| transport protein [Streptococcus pneumoniae Hungary19A-6] gi|194397569|ref|YP_002038134.1| hypothetical protein SPG_1427 [Streptococcus pneumoniae G54] gi|221232217|ref|YP_002511370.1| hypothetical protein SPN23F_14690 [Streptococcus pneumoniae ATCC 700669] gi|225857130|ref|YP_002738641.1| transport protein [Streptococcus pneumoniae P1031] gi|225859262|ref|YP_002740772.1| transport protein [Streptococcus pneumoniae 70585] gi|225861338|ref|YP_002742847.1| transport protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649210|ref|ZP_04523462.1| transport protein [Streptococcus pneumoniae CCRI 1974] gi|237821819|ref|ZP_04597664.1| transport protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230580|ref|ZP_06964261.1| transport protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255875|ref|ZP_06979461.1| transport protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503240|ref|YP_003725180.1| permease [Streptococcus pneumoniae TCH8431/19A] gi|307068149|ref|YP_003877115.1| putative permease [Streptococcus pneumoniae AP200] gi|307126929|ref|YP_003878960.1| transport protein [Streptococcus pneumoniae 670-6B] gi|14972994|gb|AAK75596.1| membrane protein [Streptococcus pneumoniae TIGR4] gi|15459004|gb|AAL00161.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077590|gb|ABJ55310.1| membrane protein, putative [Streptococcus pneumoniae D39] gi|147756490|gb|EDK63531.1| hypothetical protein CGSSp11BS70_01067 [Streptococcus pneumoniae SP11-BS70] gi|147758742|gb|EDK65739.1| hypothetical protein CGSSp14BS69_02714 [Streptococcus pneumoniae SP14-BS69] gi|147760433|gb|EDK67411.1| hypothetical protein CGSSp18BS74_08355 [Streptococcus pneumoniae SP18-BS74] gi|147922870|gb|EDK73986.1| hypothetical protein CGSSp3BS71_09436 [Streptococcus pneumoniae SP3-BS71] gi|147925750|gb|EDK76825.1| hypothetical protein CGSSp6BS73_08494 [Streptococcus pneumoniae SP6-BS73] gi|147928628|gb|EDK79642.1| hypothetical protein CGSSp9BS68_04385 [Streptococcus pneumoniae SP9-BS68] gi|147930007|gb|EDK80994.1| hypothetical protein CGSSp23BS72_09413 [Streptococcus pneumoniae SP23-BS72] gi|168994883|gb|ACA35495.1| transport protein [Streptococcus pneumoniae Hungary19A-6] gi|172042748|gb|EDT50794.1| transport protein [Streptococcus pneumoniae CDC1873-00] gi|183571988|gb|EDT92516.1| transport protein [Streptococcus pneumoniae SP195] gi|183576790|gb|EDT97318.1| transport protein [Streptococcus pneumoniae CDC3059-06] gi|183578167|gb|EDT98695.1| transport protein [Streptococcus pneumoniae MLV-016] gi|194357236|gb|ACF55684.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|220674678|emb|CAR69251.1| putative membrane protein [Streptococcus pneumoniae ATCC 700669] gi|225720027|gb|ACO15881.1| transport protein [Streptococcus pneumoniae 70585] gi|225725463|gb|ACO21315.1| transport protein [Streptococcus pneumoniae P1031] gi|225727330|gb|ACO23181.1| transport protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238835|gb|ADI69966.1| permease [Streptococcus pneumoniae TCH8431/19A] gi|301794517|emb|CBW36959.1| putative membrane protein [Streptococcus pneumoniae INV104] gi|301800341|emb|CBW32970.1| putative membrane protein [Streptococcus pneumoniae OXC141] gi|301802225|emb|CBW34975.1| putative membrane protein [Streptococcus pneumoniae INV200] gi|306409686|gb|ADM85113.1| Predicted permease [Streptococcus pneumoniae AP200] gi|306483991|gb|ADM90860.1| transport protein [Streptococcus pneumoniae 670-6B] gi|327389688|gb|EGE88033.1| hypothetical protein SPAR5_1378 [Streptococcus pneumoniae GA04375] gi|332072296|gb|EGI82779.1| hypothetical protein SPAR50_1465 [Streptococcus pneumoniae GA17570] gi|332073839|gb|EGI84317.1| hypothetical protein SPAR68_1511 [Streptococcus pneumoniae GA41301] gi|332074253|gb|EGI84730.1| hypothetical protein SPAR148_1427 [Streptococcus pneumoniae GA17545] Length = 388 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 120/338 (35%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K +++ +F+ Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNR--------VIAITIVFV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQS 132 + LF+ + + + L +V+ ++ + I G+ A L + L + Sbjct: 94 IIALFIIWGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLT 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T L + + S F +++I + LF+ RDG + L Sbjct: 154 NFSSQATVLASKVSSQAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFI 213 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ V + + + G +AI ++ + + G+ V LGV I+ Sbjct: 214 PRKLKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILN 273 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P ++ L + + + +E I + + P ++G + + + Sbjct: 274 LVPYLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINV 333 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G+ G+ +G + A V+ K Sbjct: 334 LFVLLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|228903114|ref|ZP_04067250.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 4222] gi|228967694|ref|ZP_04128713.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar sotto str. T04001] gi|228791986|gb|EEM39569.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar sotto str. T04001] gi|228856523|gb|EEN01047.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 4222] Length = 365 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATIAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 305 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|228935904|ref|ZP_04098714.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229186851|ref|ZP_04314006.1| Sporulation integral membrane protein YtvI [Bacillus cereus BGSC 6E1] gi|228596588|gb|EEK54253.1| Sporulation integral membrane protein YtvI [Bacillus cereus BGSC 6E1] gi|228823672|gb|EEM69494.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 365 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|222098058|ref|YP_002532115.1| hypothetical protein BCQ_4400 [Bacillus cereus Q1] gi|228987844|ref|ZP_04147953.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141322|ref|ZP_04269860.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST26] gi|229198746|ref|ZP_04325443.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1293] gi|221242116|gb|ACM14826.1| membrane protein, putative [Bacillus cereus Q1] gi|228584729|gb|EEK42850.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1293] gi|228642103|gb|EEK98396.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST26] gi|228771892|gb|EEM20349.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 365 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|76788071|ref|YP_329894.1| hypothetical protein SAK_1281 [Streptococcus agalactiae A909] gi|76563128|gb|ABA45712.1| membrane protein, putative [Streptococcus agalactiae A909] Length = 396 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 131/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +D+ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFTLALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|226307717|ref|YP_002767677.1| hypothetical protein RER_42300 [Rhodococcus erythropolis PR4] gi|226186834|dbj|BAH34938.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 425 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 17/308 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ + PV A+++ WP I + A I V + + + + Sbjct: 80 LWVI---ILPVALAIVVATVMWPPTRGMIKR-GMPPAAAAGITLVLSIGILAGVIAGIVP 135 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + EL +K V WL P + + + Sbjct: 136 SVVSQAPELANKTTEGIN---QVQDWLQGPPLNLK---------DDQIDNAVHAVITKVQ 183 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I +++ ++I FFF +DG L ++G + +++ Sbjct: 184 ESGTAIASGVFSGVSTASSLLVTLGLVLILAFFFIKDGPRFIPWLHAVGGGRAGRHLEEV 243 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + + ++++ + + +G+ + GVP L ++T I IP GA ++ Sbjct: 244 LTRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFIGGFIPIVGAFVAG 303 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ + A + + I L+P L +KL + + G Sbjct: 304 ALAVLVALVANGLTTAIIVLIIILAVQQIEGNVLQPVLQSKSMKLHAVIVLLAVAAGSSL 363 Query: 323 MGLLGLFI 330 G++G F+ Sbjct: 364 YGIVGAFL 371 >gi|125717282|ref|YP_001034415.1| permease, putative [Streptococcus sanguinis SK36] gi|125497199|gb|ABN43865.1| Permease, putative [Streptococcus sanguinis SK36] Length = 360 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F + +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLGKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A + I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQLVQLIEGNIIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G GL+G+ + A+I + +E ++ +E K Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|83311943|ref|YP_422207.1| permease [Magnetospirillum magneticum AMB-1] gi|82946784|dbj|BAE51648.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 358 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 114/346 (32%), Gaps = 17/346 (4%) Query: 5 MLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + Q + W+I + LV LY L+ P ++ + + + P+ S T Sbjct: 1 MSSGQRLRFWLIGGVAFLVLLYMLRSVMLPFVAGMAVAYFLDPLADRMERA-GLSRTLAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----VLANQHGIPVPRWLSDIPGGMWA 119 I + + + L L ++ V KV +P+ + Sbjct: 60 AIICLVFFGVMGLGLTLLAPIIQQQVVTFVQKVPVYAQSLQTRAMPLLEEVYRHLSPEDL 119 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +L + ++ + LK G+ + + + F+ R Sbjct: 120 EKLRSSAGAYAGTAVGWGLGVLKGVLSG---------GIAVMSILSLLFITPVVTFYLLR 170 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++D+ + R + + I G + I + G + G+ Sbjct: 171 DWDHMVAKVDNWLPRHHAETIRFELREIDRTIAGFVRGQATVCIVLAIFYGVGLTITGLD 230 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLR 297 + +G+ T + A +P + S+ L + + + V L Sbjct: 231 LGLMIGLGTGLGAFVPYVGMLIGLIASVGLALAQGGEWHLLGGVGIVFLIGNVLEGNFLT 290 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P LVG + L + F L+ G G +G+ + ++I V+ + Sbjct: 291 PKLVGDRVGLHPVWIIFSLLAGGALFGFVGILLAVPAASVIGVLTR 336 >gi|254284432|ref|ZP_04959400.1| permease [gamma proteobacterium NOR51-B] gi|219680635|gb|EED36984.1| permease [gamma proteobacterium NOR51-B] Length = 356 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 118/338 (34%), Gaps = 10/338 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I ++ Y L P + ++G+ P+ ++ S +A + + ++ L + Sbjct: 17 FAIAVLLFYVLHPILMPFVVGGLLGYLGDPVVDRLEARGWSRSGGVAAVFVIFILGLSAI 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L FL + ++ +LV ++ Q W M S + ++ Q L Sbjct: 77 -LAFLIPMLLSQLDQLVRQIPEIYQWLAGDALPWFQS---KMSLSPVKLPNIDWEQELAA 132 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ K R + G+ +I + + F+ RD + + L Sbjct: 133 NWQSLGKLITDTL--RRLTTSGIDVATILFNIALIPVVAFYLMRDWDRLMEATLDLIPRP 190 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V+ + G ++ + + L+ + G+ V LG + ++IP Sbjct: 191 WQENLSLMVAEADDVLGAFLRGQFLVMLAQALMYSVGLLIVGLDVAVVLGTAAGLASIIP 250 Query: 256 GGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + + G + L + I L P LVG I L + Sbjct: 251 YAGAVVGVGSSLAVAWFQFGGEWLPLIWVALVFGVGQTIESWFLTPLLVGDRIGLHPVAV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G + G G+ + + A++ V + +I + Sbjct: 311 IFALMAGGQVAGFTGVLVALPVAAVLLVFTRHAITHYR 348 >gi|228941775|ref|ZP_04104322.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974700|ref|ZP_04135266.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981294|ref|ZP_04141594.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis Bt407] gi|228778494|gb|EEM26761.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis Bt407] gi|228785103|gb|EEM33116.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817987|gb|EEM64065.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 365 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 305 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|42783773|ref|NP_981020.1| hypothetical protein BCE_4727 [Bacillus cereus ATCC 10987] gi|42739703|gb|AAS43628.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 365 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|27467958|ref|NP_764595.1| hypothetical protein SE1040 [Staphylococcus epidermidis ATCC 12228] gi|27315503|gb|AAO04637.1|AE016747_134 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] Length = 409 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 132/359 (36%), Gaps = 18/359 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +L++ + PI + + Sbjct: 43 VLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYRIPR----- 97 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + +++ + + L + + S++ ++ ++ + + + Sbjct: 98 ---LLGITIIYVAIIGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNNNTIL 154 Query: 124 TKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ ++ + + D+ + F + + I LFF +D Sbjct: 155 SGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFMLKD 214 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + F + + + + S G I++ GL+L Y + G+ Sbjct: 215 GHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGLKY 274 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L I A+ +++P P + +I + I + L + + F + P + Sbjct: 275 ALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISPNV 334 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G +K+ L F L+ MG++G+ IG L A++ V+ M K + N Sbjct: 335 MGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRRYNRYYGN 393 >gi|229081848|ref|ZP_04214340.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-2] gi|228701436|gb|EEL53930.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-2] Length = 365 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISVLTNFISALPTTLTVLVFILLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 305 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|229093693|ref|ZP_04224792.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-42] gi|228689578|gb|EEL43386.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-42] Length = 365 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + PI + K + +++ + V + + +L Sbjct: 18 ALLYMSGLIYPFIIAFAFAYLINPIVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|257879060|ref|ZP_05658713.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257881685|ref|ZP_05661338.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257890914|ref|ZP_05670567.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|258615305|ref|ZP_05713075.1| hypothetical protein EfaeD_06288 [Enterococcus faecium DO] gi|260558584|ref|ZP_05830780.1| conserved hypothetical protein [Enterococcus faecium C68] gi|257813288|gb|EEV42046.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257817343|gb|EEV44671.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257827274|gb|EEV53900.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|260075758|gb|EEW64064.1| conserved hypothetical protein [Enterococcus faecium C68] Length = 393 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 50 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSIWLIPFL 107 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 108 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 167 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF RD Q + ++ F +K ++ Sbjct: 168 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRDPQKFYQSVLAIVPPAFRTDFKNLT 222 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 223 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 283 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 341 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 342 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 373 >gi|228954865|ref|ZP_04116885.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960864|ref|ZP_04122497.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048303|ref|ZP_04193871.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH676] gi|229112062|ref|ZP_04241605.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-15] gi|229129880|ref|ZP_04258846.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-Cer4] gi|229152791|ref|ZP_04280974.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1550] gi|229180915|ref|ZP_04308250.1| Sporulation integral membrane protein YtvI [Bacillus cereus 172560W] gi|229192797|ref|ZP_04319755.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 10876] gi|228590636|gb|EEK48497.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 10876] gi|228602472|gb|EEK59958.1| Sporulation integral membrane protein YtvI [Bacillus cereus 172560W] gi|228630611|gb|EEK87257.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1550] gi|228653571|gb|EEL09443.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-Cer4] gi|228671385|gb|EEL26686.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-15] gi|228723028|gb|EEL74405.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH676] gi|228798760|gb|EEM45740.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804854|gb|EEM51453.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 365 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 305 VLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|157150464|ref|YP_001450150.1| putative permease [Streptococcus gordonii str. Challis substr. CH1] gi|157075258|gb|ABV09941.1| putative permease [Streptococcus gordonii str. Challis substr. CH1] Length = 388 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 123/338 (36%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F+ PV+ A ++ + P+ +K V++ +F+ Sbjct: 42 ISFIFTPIIEFISVIMLPVILAGLLYYLLNPLVDMMEKRKINR--------LVAITIVFV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + + + L +++V ++ + I + S L + + + Sbjct: 94 LITVLLIWGLAVVIPNLQAQIVSFFRNMPSYLKQSKKIIDDLLDSRLSEEFRPQIEQVTE 153 Query: 136 LSETFLKTNGIDFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + L T +F R +AS F +++I M LF+ RDG ++ + Sbjct: 154 NISSQLTTWASNFSARAVNWASHFVSAASQVIVAVIIMPFILFYLLRDGKNLKGYITQFL 213 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ V + + G +AI + + + G+ V L V+ ++ Sbjct: 214 PKKLREPVGQVLSDVNSQLANYVRGQITVAIIVAFMFMILFKIIGLRYGVTLAVVAGVLN 273 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P ++ L + + + +E I + + P ++G + + + Sbjct: 274 LVPYLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLSIHPITI 333 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G+ G+ +G + A V+ K Sbjct: 334 LFVLLTSGSMFGIWGVLLGIPVYASAKVVITAIFKWYK 371 >gi|228997824|ref|ZP_04157428.1| hypothetical protein bmyco0003_23950 [Bacillus mycoides Rock3-17] gi|228761956|gb|EEM10898.1| hypothetical protein bmyco0003_23950 [Bacillus mycoides Rock3-17] Length = 348 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 124/330 (37%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L A+ + F P+ +KK + ++ V ++ L V + + Sbjct: 22 FISTLFFPILIAMFLYFIFNPVLVFLEAKKVPR-SLAILLLYVFIITLAAVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + G ++ ++ L T+ ++++ + +LK Sbjct: 81 SQQLMDLVKNMPTYIKEG---KVYIQELSHHRLFEWLATQDYVSIETIEKNAIEYLKE-I 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A+ I + L + + LF+ ++DG + + S + +I + Sbjct: 137 PNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPESYREEGLRIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G Y + +P LG+I A +IP P A Sbjct: 197 ETGETLSAYIQGQALVCLFVGAFTFIGYVIMDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVGLFVSPMQAFWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVLILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + Sbjct: 317 VGMILAVPAYAVTKTVVSNLVRLFKMKRNN 346 >gi|228917234|ref|ZP_04080791.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929643|ref|ZP_04092661.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948321|ref|ZP_04110604.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124162|ref|ZP_04253354.1| Sporulation integral membrane protein YtvI [Bacillus cereus 95/8201] gi|228659464|gb|EEL15112.1| Sporulation integral membrane protein YtvI [Bacillus cereus 95/8201] gi|228811308|gb|EEM57646.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830030|gb|EEM75649.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842435|gb|EEM87526.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 365 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|229085673|ref|ZP_04217903.1| hypothetical protein bcere0022_22790 [Bacillus cereus Rock3-44] gi|228697630|gb|EEL50385.1| hypothetical protein bcere0022_22790 [Bacillus cereus Rock3-44] Length = 348 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 122/330 (36%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P+L AL + F P+ +KK + ++ V ++ L V + + Sbjct: 22 FISTLFFPILIALFLYFIFNPVLVFLEAKKVPR-SLAILLLYVFIITLAAVAIGVVVPTI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +L + + G ++ D+ L T+ ++++ + +LK Sbjct: 81 SQQLMDLAKNMPTYIKEG---KIYIQDLSHHKLFEWLATQDYVSIETIEKNAIEYLKE-I 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + A+ I + L + + LF+ ++DG + + S + I + Sbjct: 137 PNTVTSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPESYREEGLHIIK 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ + G Y + +P LG+I A +IP P A Sbjct: 197 ETGETLSAYIQGQALVCLFIGAFTFIGYVIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I + P ++ + + L ++G G+ Sbjct: 257 AVIVALFVSPVQAAWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVLILGVGNFAGI 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ + A+ + + K + Sbjct: 317 VGMILAVPAYAVTKTVVSNLVRLFKMKRNN 346 >gi|149011739|ref|ZP_01832935.1| hypothetical protein CGSSp19BS75_07222 [Streptococcus pneumoniae SP19-BS75] gi|182684459|ref|YP_001836206.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|303254157|ref|ZP_07340270.1| membrane protein [Streptococcus pneumoniae BS455] gi|303260727|ref|ZP_07346687.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|303263054|ref|ZP_07348986.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|303264458|ref|ZP_07350378.1| membrane protein [Streptococcus pneumoniae BS397] gi|303267436|ref|ZP_07353290.1| membrane protein [Streptococcus pneumoniae BS457] gi|303269789|ref|ZP_07355538.1| membrane protein [Streptococcus pneumoniae BS458] gi|147764170|gb|EDK71102.1| hypothetical protein CGSSp19BS75_07222 [Streptococcus pneumoniae SP19-BS75] gi|182629793|gb|ACB90741.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|302598883|gb|EFL65916.1| membrane protein [Streptococcus pneumoniae BS455] gi|302635817|gb|EFL66320.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|302638130|gb|EFL68605.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|302640682|gb|EFL71080.1| membrane protein [Streptococcus pneumoniae BS458] gi|302643027|gb|EFL73320.1| membrane protein [Streptococcus pneumoniae BS457] gi|302646270|gb|EFL76497.1| membrane protein [Streptococcus pneumoniae BS397] Length = 388 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 120/338 (35%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L F+ PV+ + ++ + PI K +++ +F+ Sbjct: 42 ISFLFSPVLDFIAVVMLPVILSGLLYYLLNPIVDWMEKHKVNR--------VIAITIVFV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQS 132 + LF+ + + + L +V+ ++ + I G+ A L + L + Sbjct: 94 IIALFIIWGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLT 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T L + + S F +++I + LF+ RDG + L Sbjct: 154 NFSSQATVLASKVSSQAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFI 213 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ V + + + G +AI ++ + + G+ V LGV I+ Sbjct: 214 PRKLKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILN 273 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P ++ L + + + +E I + + P ++G + + + Sbjct: 274 LVPYLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINV 333 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G+ G+ +G + A V+ K Sbjct: 334 LFVLLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|262282562|ref|ZP_06060330.1| membrane protein [Streptococcus sp. 2_1_36FAA] gi|262261853|gb|EEY80551.1| membrane protein [Streptococcus sp. 2_1_36FAA] Length = 388 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 119/328 (36%), Gaps = 11/328 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV+ A ++ + P+ +K V++ +F++ + L + Sbjct: 52 FISVIMLPVILAGLLYYLLNPLVDMMEKRKINR--------LVAITIVFVLITVLLIWGL 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L +++V ++ + I + S L + + + + L T Sbjct: 104 AVVIPNLQTQIVSFFRNMPAYLKQSKKIIDDLLDSRLSEEFRPQIEQVTDNISSQLTTWA 163 Query: 146 IDFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +F R +AS F +++I M LF+ RDG ++ + + Sbjct: 164 SNFSARAVNWASNFVSAASQVIVAVIIMPFILFYLLRDGKNLKGYVTQFLPKKLREPVGQ 223 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + G +AI + + + G+ V L V+ ++ ++P Sbjct: 224 VLSEVNSQLANYVRGQITVAIIVAFMFMILFKIIGLRYGVTLAVVAGVLNLVPYLGSFLA 283 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + +E I + + P ++G + + + F L+ Sbjct: 284 MLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLSIHPITILFVLLTSGSM 343 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+ +G + A V+ K Sbjct: 344 FGIWGVLLGIPVYASAKVVITAIFKWYK 371 >gi|119477091|ref|ZP_01617327.1| hypothetical protein GP2143_02174 [marine gamma proteobacterium HTCC2143] gi|119449454|gb|EAW30692.1| hypothetical protein GP2143_02174 [marine gamma proteobacterium HTCC2143] Length = 352 Score = 96.8 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 122/351 (34%), Gaps = 9/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + Q + ++ +I+ L+ P L A ++ + P ++ T Sbjct: 1 MNDKQRLWLLLVAVLIIALFLLLEPILTPFLVAGLLAYLGDPFADRLEAR-GMGRTVAVT 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELW 123 + +++ L I ++ ++ L + Q + + WL S Sbjct: 60 LVFSALILLLITAVVLTIPLIGRQLDLLAHAIPQWLEQLQLTLIPWLQKTLELPQGSLPI 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + + L + +++ + + F+ RD + Sbjct: 120 AEFKTAISNNWVTAGSMLGQLWGKIAGSSLAMIAG-----LANLVLIPVVTFYLLRDWDT 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L K++ ++I + G ++ + G++ G+ + Sbjct: 175 LMSHIRDLLPRSIEPTVVKLTNECDEIIGAFIRGQLLVMLALGILYSVGLGFVGLDLALI 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG+I + +++P A + + + L A+ + L P LV Sbjct: 235 LGLIAGLASIVPYMGFFVGIAAASVAAWFQFHELMPLIGVALVFAVGQLLEGMVLTPLLV 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G I L + F ++ G + G G+ + A+I V+ + + + K++ Sbjct: 295 GDRIGLHPVAVIFAIMAGGQLAGFSGILLALPAAAIIMVLLRHAHRSYKDS 345 >gi|289550856|ref|YP_003471760.1| UPF0118 membrane protein YrrI [Staphylococcus lugdunensis HKU09-01] gi|289180388|gb|ADC87633.1| UPF0118 membrane protein YrrI [Staphylococcus lugdunensis HKU09-01] Length = 406 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 134/352 (38%), Gaps = 12/352 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +LI+ + PI + + + Sbjct: 40 VLLGIVIFIFDKVSYVFEPFIIVFNTIVAPIILSLILFYLINPIIN-LMERYNIPRLLGI 98 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VI ++++ L + + L ++ L+ ++ + S + Sbjct: 99 VIVFLAIVGLIALIVNLLIPVIGSQVTRLIHNAPAYVTKFNDTLDKVTHF---SFLSSFY 155 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++ SL + + T+ D F ++ + +I LFF +DG Sbjct: 156 DQIQTNLDSLSKKIPSIV-TDYFDGFGTKLRTFAEAIVNVGVVLITTPFVLFFMLKDGHK 214 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + F + + + + S G I++ G++L Y + G+ + Sbjct: 215 FKEYTTKIMPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYTIIGLDYSLI 274 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L I A+ +++P P + +I + + + L + + FI + P ++G Sbjct: 275 LASIAAVTSVVPYLGPTIAISPAIIIALITSPLMLLKLAVVWTLVQFIEGHFISPNIMGK 334 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ L F L+ +G++G+ +G A++ V+ + K K Sbjct: 335 TLKIHPLTIIFILLSAGNLLGIVGVILGIPAYAILKVLVSHIFLIFKRRYNK 386 >gi|329923748|ref|ZP_08279143.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328941114|gb|EGG37416.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 379 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 121/327 (37%), Gaps = 5/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K P++ + I+ + P+ +K + + +I + + + V +L + Sbjct: 50 LIKTIVLPIILSGILYYLLNPLVDMMEKRKIKR-GWSILILYLLIAGILTVVVLAVIPVL 108 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L+ ++ L+ G + ++ + T T Sbjct: 109 RTQIMSLIDNFPTYSEKVRQQFEELT----GSQLYSQLQEAVNINSQEWWGTITQKATEI 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ F F + LSII + LF+ +DG + Q++ S + + + Sbjct: 165 LNSTWSKVGGFLGAFTEIVLSIITVPFVLFYMLKDGKKLPQKILSFLPTQSRSGILHVLQ 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I S G I+++ G++L Y + G+ + L +I + +++P P Sbjct: 225 DINHQISSFIRGQIIVSVCIGILLYIGYMIIGLDYALILAIIASFTSVVPYLGPAIAITP 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I I K + P ++G +K+ + F ++ G+ Sbjct: 285 ALIVALVTSPVMLLKMVAVWTIVQLIEGKFISPQIMGKTLKIHPITIIFVILTAGNLFGV 344 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ + A++ V K Sbjct: 345 VGILLAVPGYAVLKVCVTHIFEWFKNT 371 >gi|146321353|ref|YP_001201064.1| permease [Streptococcus suis 98HAH33] gi|145692159|gb|ABP92664.1| Predicted permease [Streptococcus suis 98HAH33] Length = 391 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 124/329 (37%), Gaps = 13/329 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL+ P++ ++ + P+ K TV + LF++ L + + Sbjct: 55 FLEIVLLPMILTGLLYYLLNPMVDWMEKHKISR--------TVGISILFVLISLLIIWGL 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + +V Q+ + + G+ + + + + + Sbjct: 107 AVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIVAYA 166 Query: 146 IDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F +AS ++I+ M LF+ RDG +++ + + Sbjct: 167 QKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKWREPIGT 226 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + V + + G +AI L+ + + G+ + LGV+ + +IP G+ ++ Sbjct: 227 VLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIPYLGSFLA 286 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I LI G I + + IE I + + P ++G + + + F L+ + Sbjct: 287 MIPAVILGLIAGPIML-IKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFVLLTAGQ 345 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+F+G + A I V+ K + K Sbjct: 346 MYGVLGVFLGIPIYASIKVLVKAAFEWYK 374 >gi|55980278|ref|YP_143575.1| hypothetical protein TTHA0309 [Thermus thermophilus HB8] gi|55771691|dbj|BAD70132.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 365 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 115/333 (34%), Gaps = 8/333 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + +L+A + P+ + ++ + + ++ + + L + FL ++ Sbjct: 34 WPALSVLLTAFAFAYLVHPLVQALERRRLPRAVGVVLVYLLLGLFLAL--ASFLAAQTVV 91 Query: 88 EMKELVSKVVLANQHG----IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ L + + +P +P + + + + L L Sbjct: 92 ELSRLARDLPRLLDPLLAWLVALPDRAQAVPVPESLRPVLEELTRNLRGLLQGFLEALVR 151 Query: 144 NGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S G L + +I +F D + + ++ + + Sbjct: 152 WLQGLLAQGGSLLGFFTSLLGGVFQLFTALILSAYFLYDLPRLGRAALAVFPEPYQPLAQ 211 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + G ++A+ G ++G +WL GVP +LG + + +IP + Sbjct: 212 DLAAKLNASVGGYVRGQLLVALCVGFLVGLGFWLVGVPLAASLGFLAGVFNLIPFVGVVV 271 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L G + A L + L P +VG +L + ++ G Sbjct: 272 SGVPALLLAATGGLGKAALALLVMVAANQLEAHVLGPLIVGRATRLHPVTAIAAILTGGT 331 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G + A + V+ ++ + +E Sbjct: 332 LFGLWGALLAVPAAAFLKVVLEDYYKGSRFYRE 364 >gi|168492574|ref|ZP_02716717.1| transport protein [Streptococcus pneumoniae CDC0288-04] gi|183573280|gb|EDT93808.1| transport protein [Streptococcus pneumoniae CDC0288-04] Length = 388 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K +++ +F+ Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNR--------VIAITIVFV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQS 132 + LF+ + + + L +V+ ++ + I G+ A L + L + Sbjct: 94 ITALFIIWGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLT 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T L + + S F +++I + LF+ RDG + L Sbjct: 154 NFSSQATVLASKVSSQAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFI 213 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ V + + + G +AI ++ + + G+ V LGV I+ Sbjct: 214 PRKLKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILN 273 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P ++ L + + + +E I + + P ++G + + + Sbjct: 274 LVPYLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINV 333 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G+ G+ +G + A V K Sbjct: 334 LFVLLTSGSMFGIWGVLLGIPVYASAKVAISAIFEWYK 371 >gi|302876700|ref|YP_003845333.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|307687375|ref|ZP_07629821.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|302579557|gb|ADL53569.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] Length = 371 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 118/322 (36%), Gaps = 5/322 (1%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + AP + ALI+ P + + I + V+ +F L + + E Sbjct: 34 YYLAPFVVALILSLMIEPFVKFLGDTLKLKRAISSAIGVLMVLSVFGGLLALIISKLVRE 93 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + L + ++ + I + + K +S+ S + ++ + Sbjct: 94 LISLSDVLPDLIKNAY---ENIMAINSDSFFDKWLPKKISYDFSNITDTLYSSLSSFANP 150 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + + +I M+I +F I ++ + + K V Sbjct: 151 LAKGIFSTASALPNMFIFLIVMVIGTYFISSSKHDIINLINKHLPKTWLSSLNKSKDGVF 210 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 + G II + L + + GV AL +I ++ ++P G+ + +I Sbjct: 211 SSLSRLLKGYLIILTITFIELLIGFNIIGVKYASALALIISVFDILPLIGSGLFLIPWAI 270 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 Y +I G LF+ I + I+ + + P ++G I L L T + G +G G Sbjct: 271 YSVITGATTLGIRLFILY-IVILIIRQLIEPKIIGAQIGLHPLATLISMYTGFSLLGGAG 329 Query: 328 LFIGPVLMALIAVIWKESIMAI 349 +F+GP+++ + + + Sbjct: 330 IFLGPIILLITKAVLSTIYRGL 351 >gi|253574904|ref|ZP_04852244.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845950|gb|EES73958.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 341 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 117/335 (34%), Gaps = 13/335 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + FLK FAP + A+II + PI ++ T++V+ ++ V L Sbjct: 18 MFALVYRFLKAVFAPFVIAIIISYVLNPIVRMLGGRRVPR--------TMAVLLIYAVFL 69 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L M + V ++ +H + + L + E Sbjct: 70 TGLCVVLMNVIPMFVEQLEELGEHLPELTLHTQQMMNRWDNGILPGSIRMGMNNWFYQFE 129 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L + F+ + G++F + + + F+ +D I + + Sbjct: 130 NRLASAISGFLDNIGTTIGVVFNAFIIPFLI-----FYMLKDIELIERLILQYLPRSRRK 184 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + + G ++ + G++ Y L G+P + L + A+ +IP Sbjct: 185 SIITLLKEIDMALGNYVRGQLLVCVIIGVLAYIGYMLIGMPFALLLAGVVALCNIIPYLG 244 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A ++ + + + L + I + P +VG + + + L+ Sbjct: 245 PFLGAAPALVMATTISWKMVLLVLLVNMLCQTIESNVISPQVVGRSLHMHPMLIILALLI 304 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+ GL + A++ V+ + K Sbjct: 305 GGELAGVPGLILAVPFFAVVKVVIQHFYAYYVRRK 339 >gi|125624132|ref|YP_001032615.1| hypothetical protein llmg_1311 [Lactococcus lactis subsp. cremoris MG1363] gi|124492940|emb|CAL97903.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070906|gb|ADJ60306.1| hypothetical protein LLNZ_06780 [Lactococcus lactis subsp. cremoris NZ9000] Length = 390 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 116/321 (36%), Gaps = 8/321 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A + + PI ++ V+ + + + + + + + Sbjct: 60 PVILAAVFYYLLNPIVDFLEKRRVPR-----VLTIIVLFLIIAALIAWGLIVAIPNVISG 114 Query: 93 VSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + H + + ++ + + + +S+ + KT ++ + Sbjct: 115 VDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKTFSVNAVTT 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S +S+I LF+ RDG ++ + L + + K+ + + Sbjct: 175 L-SHLISKTTSILISLIVFPFVLFYLLRDGQRLNGFITHLLPNDWRKETSKVLHEINSQL 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 + G ++AI ++ + G+ VAL + + ++P G+ ++ + I L Sbjct: 234 SNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIPMVIVGL 293 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + + IE + + + P ++G + + + F L+ + +G+ G+ + Sbjct: 294 AIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILGVWGVLL 353 Query: 331 GPVLMALIAVIWKESIMAIKE 351 A + VI +E Sbjct: 354 AIPFYATLKVIIVHVYEWYRE 374 >gi|315645819|ref|ZP_07898940.1| hypothetical protein PVOR_10134 [Paenibacillus vortex V453] gi|315278580|gb|EFU41894.1| hypothetical protein PVOR_10134 [Paenibacillus vortex V453] Length = 355 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 125/340 (36%), Gaps = 13/340 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W++ + L FLK AP L A+II + P+ +K S ++V+ + Sbjct: 27 WLLRPLFLDVYRFLKAVLAPFLVAMIISYVLNPVVCMLSDRKVPRS--------MAVLII 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + V L L + + L+ ++ N+H + + + + L + S Sbjct: 79 YAVFLTSLAVILINMIPMLIRQLEELNEHLPELTMNAQSLMTNLDSRLLPPGVRTGMNSW 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 E+ L F+ ++ +++ + +F+ +D + S Sbjct: 139 FFQMESRLAGGITAFMDNIG-----NTINILFNVLIVPFLIFYILKDFEVFQRTAVSYLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + G ++ + G++ Y + G+P + L I A+ + Sbjct: 194 RSHRKSIVMLLKEIDTALGNYVRGQFLVCLIIGVLAYVGYIIVGMPYALLLASIVAVFNI 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++ + + + + I + + P +VG + + L Sbjct: 254 IPYLGPFLGAAPALVMASTISWKMVLLVVVVNMICQTLESNVISPQVVGKKLHMHPLLII 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ G + G +GL + + A+I V+ + K Sbjct: 314 FALLVGGQLAGTVGLILAVPVFAVIKVLLQHFFAYYVRRK 353 >gi|303238702|ref|ZP_07325235.1| cyclic nucleotide-binding protein [Acetivibrio cellulolyticus CD2] gi|302593821|gb|EFL63536.1| cyclic nucleotide-binding protein [Acetivibrio cellulolyticus CD2] Length = 349 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 134/350 (38%), Gaps = 12/350 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESS 59 + I+ ++ ++ VS+ F+ + F P + A++I + P+ +KK + S Sbjct: 4 KRKTILYSLLFLMLAVSVAFIYYYRGKIGKVFIPFIMAIVISYLLHPLVIKLENKKIKRS 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 I + + +F + L L + + ++ +++ R + + + Sbjct: 64 -----IGIILIYLIFGISLAVLTIFVVPQLINNTRELINILPGITMEYRNNFNGMVNIIS 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W + +I + + N I + + M + +I +I ++ + Sbjct: 119 ASKWPDDIKSAIFREINNGAQVAENTIIVMLKNTLSGLMKTVSTAFDLILSMIIAYYILK 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D SL + R + V+ + G + A+ G++ + V Sbjct: 179 DAEYFKNVSLSLVPRKWRNGIIGACREINGVLSNFIQGQILTALIVGILESIGLMIVRVK 238 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+I I +IP P ++ + + + A + I + + + P Sbjct: 239 YPLILGMIGGIANIIPYFGPFIGAIPAVAVALIESPMKAVLTIIVFVIIQQLDNGFISPK 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ G + L + T ++ G G++G+ + + A+I VI K +I +I Sbjct: 299 IIEGRVGLHPVTTILAVLIGGEFFGIIGMLVSVPIAAMIKVIGKRTIESI 348 >gi|317128236|ref|YP_004094518.1| hypothetical protein Bcell_1524 [Bacillus cellulosilyticus DSM 2522] gi|315473184|gb|ADU29787.1| protein of unknown function UPF0118 [Bacillus cellulosilyticus DSM 2522] Length = 358 Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 128/326 (39%), Gaps = 17/326 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A +I + P+ + K+ + ++ + + LF++ L Y + E + Sbjct: 43 ITPFLLAAVIAYLLHPLIEAL-KKRNIPKSLSILLIYAAFVILFVIVLFRGTPYILEEGQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL+ ++ + Q +A+ + + P + + E ++ +G +I Sbjct: 102 ELLDQLPVMAQTYTD------------FANTIHAQTEVLPSTFQEQVEGWM-ESGEAYIA 148 Query: 151 RFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G+I D+ L +I + +F+ +D + + + + + + + Sbjct: 149 ESITSIGLIIRQLFDWMLLLIVIPFIVFYLLKDMDLVKKVCWYITPDRWRKEGASLVKEI 208 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + G ++ I G++ +W+ +P V L V + +IP PI + Sbjct: 209 DHSLGNYIRGQILVCIVVGILAYIGFWIIDMPYAVLLAVFIGLTNIIPYFGPIIGVIPVV 268 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 ++ + + + I I + P +VG + + + F LV G G++G Sbjct: 269 FIALTESFQLVILGLIVNFIVQIIEGNLIAPLIVGKTLHMHPVLIIFALVVGGELGGVIG 328 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 L I ++ ++ VI ++E K Sbjct: 329 LIISVPILTVLRVILLHIRQIVRERK 354 >gi|255037761|ref|YP_003088382.1| hypothetical protein Dfer_4013 [Dyadobacter fermentans DSM 18053] gi|254950517|gb|ACT95217.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 389 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 121/337 (35%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + LY L+ P+ ++++ P+ + ++ A++ ++ Sbjct: 4 KLASTLVALIATVYILYILRETLIPLAFSILLAILLHPVCAWLELRRVPR--IGAILLSI 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + IV L++L + E + ++ + + L ++L+ Sbjct: 62 LALFTAIVILVYLVSMQVGSFAEELPRITEKAEAILD------------QTLTLGERYLN 109 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ ++ N + F + + + + + +FFF + Sbjct: 110 ISRTQQVSEAQKYLINALSEGRAFLLNTLVTTTGAISTFVLIPLYIFFFLLYRDFFRMFV 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + +VI+S G+ ++ + G++ + G+P + G + Sbjct: 170 HKAIRRVPNEELNVLLKKIYEVIQSYLSGLFLVILIVGVLNSIGLLILGIPHAIFFGFLA 229 Query: 249 AIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP + + ++ + + A + + F+ + P +VG + Sbjct: 230 GFLILIPYIGILIGSVLPALLSIVTMDSPWYAVGVIGVMSFVQFLEGNFITPNIVGSKVS 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L L G + GL GL + + A++ VI Sbjct: 290 VNPLAAIVALFLGGQLWGLSGLILALPVTAILKVILD 326 >gi|22537352|ref|NP_688203.1| hypothetical protein SAG1194 [Streptococcus agalactiae 2603V/R] gi|22534224|gb|AAN00076.1|AE014246_11 membrane protein, putative [Streptococcus agalactiae 2603V/R] Length = 396 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 131/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +D+ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNILDWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|315658357|ref|ZP_07911229.1| YubA like protein [Staphylococcus lugdunensis M23590] gi|315496686|gb|EFU85009.1| YubA like protein [Staphylococcus lugdunensis M23590] Length = 407 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 134/352 (38%), Gaps = 12/352 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +LI+ + PI + + + Sbjct: 41 VLLGIVIFIFDKVSYVFEPFIIVFNTIVAPIILSLILFYLINPIIN-LMERYNIPRLLGI 99 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VI ++++ L + + L ++ L+ ++ + S + Sbjct: 100 VIVFLAIVGLIALIVNLLIPVIGSQVTRLIHNAPAYVTKFNDTLDKVTHF---SFLSSFY 156 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++ SL + + T+ D F ++ + +I LFF +DG Sbjct: 157 DQIQTNLDSLSKKIPSIV-TDYFDGFGTKLRTFAEAIVNVGVVLITTPFVLFFMLKDGHK 215 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + F + + + + S G I++ G++L Y + G+ + Sbjct: 216 FKEYTTKIMPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYTIIGLDYSLI 275 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L I A+ +++P P + +I + + + L + + FI + P ++G Sbjct: 276 LASIAAVTSVVPYLGPTIAISPAIIIALITSPLMLLKLAVVWTLVQFIEGHFISPNIMGK 335 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ L F L+ +G++G+ +G A++ V+ + K K Sbjct: 336 TLKIHPLTIIFILLSAGNLLGIVGVILGIPAYAILKVLVSHIFLIFKRRYNK 387 >gi|311069680|ref|YP_003974603.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] gi|310870197|gb|ADP33672.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] Length = 368 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 118/312 (37%), Gaps = 6/312 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+L A I+ F P+ K T ++ + + L + + ++ Sbjct: 41 FFPILIAGILFFIFNPVVRLLEKKIP--RTLSILLIYLLFIGLLVFVFATVGPILTSQIS 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L + + + +D+ W + + + ++ +FL++ + Sbjct: 99 GLFGNLPEYIKQIQGLT---NDLSHSQWFTWMMNQDYVSISKIEQSLTSFLQSLPQNITS 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ FG++ + L II + LF+ +DG + + KI + + Sbjct: 156 SLSAVFGVVT-NITLVIITVPFILFYMLKDGHRFPHLAVKILPASYRTEGMKIFKDLYDT 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + F G +I + G Y + G+P + LG++ A+ +IP P A ++ + Sbjct: 215 LAAYFQGQLLICLFVGTACFIGYSIIGLPYALILGLVMAVTNIIPYVGPFLGAAPAVIIG 274 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + + L P ++G + L L+G G+LG+ + Sbjct: 275 LMDSPARALFAIIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILLLIGAGSFGGILGMIL 334 Query: 331 GPVLMALIAVIW 342 + A++ + Sbjct: 335 AVPVYAVLKAFF 346 >gi|77405418|ref|ZP_00782512.1| membrane protein, putative [Streptococcus agalactiae H36B] gi|77176000|gb|EAO78775.1| membrane protein, putative [Streptococcus agalactiae H36B] Length = 396 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 131/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +D+ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|213965467|ref|ZP_03393662.1| putative membrane protein [Corynebacterium amycolatum SK46] gi|213951851|gb|EEB63238.1| putative membrane protein [Corynebacterium amycolatum SK46] Length = 516 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 99/307 (32%), Gaps = 22/307 (7%) Query: 14 WMIMFIILVSLYFLKGFFA--------PVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 W + F+I + ++ P+L ALI+ P + + + A+ Sbjct: 86 WCLRFLITAAALYVSAMILGKIWAGVLPILLALIVSTVLAPPAVFLMKHRWPRA-LAALT 144 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + FL + EL + Q V + P + ++ Sbjct: 145 VILGAVAVLGGVVAFLAPTVQSQFPELRRQFTDGIQE---VQNIIQAPPFNVKDEQILDA 201 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q L+ S I + + ++++ M++ FFF +DG Sbjct: 202 LDQGSQWLQERSGD---------IANTVFQGISVVSSVAVTLMAMLVLTFFFIKDGQDFL 252 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L + ++ + I+++ + + +G+ + VP + L Sbjct: 253 PWLRRLTGRRLGWHLTEVLTRSWNTLSGYIRTQAIVSLIDAVFIGAGLAILNVPLAMVLA 312 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+T IP GA + + L+ + A + L I L P L Sbjct: 313 VVTFFAGFIPIVGAFTAGFIAVVVALVANGLTTAIFVLLIIIAVQQIEGNILSPILQSKA 372 Query: 305 IKLPFLP 311 + L Sbjct: 373 MDLHAAI 379 >gi|325568437|ref|ZP_08144804.1| permease [Enterococcus casseliflavus ATCC 12755] gi|325158206|gb|EGC70359.1| permease [Enterococcus casseliflavus ATCC 12755] Length = 393 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 116/330 (35%), Gaps = 11/330 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P K + V V+ L + ++ + + Sbjct: 58 PIILAGILYYLMNPTVDYLERK-GIKRIYSIFGLFVLVVGLIVWGVVVIIPKIQEQSMSF 116 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + +++I S++ + + + L ++ I Sbjct: 117 ADNLPGYLTI---IENKVNEILSDPIFSQVQDQIEASNEKLISSLTDIVQNLSRSTIQNL 173 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S FG + L++I M LF+ +DG ++ + + + + Sbjct: 174 GSFFGAVAT-IVLAVITMPFILFYLLKDGRKLAPYFVKFLPTKMRQPSLIVLKEMNDQVS 232 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ + LG+ + +IP +++L I Sbjct: 233 SYIRGQLTVAFAVAVMFMIGFSIIGLDYAITLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 292 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G + + IE I + + P ++G + + + L+ + GL+G+ +G Sbjct: 293 GGPVLLIQVLIVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKLFGLVGVILGI 352 Query: 333 VLMALIAVI------WKESIMAIKENKEKI 356 + A VI W + ++ E +E I Sbjct: 353 PVYAAAKVIITHVFEWYTRVSSLYEEEEPI 382 >gi|227551099|ref|ZP_03981148.1| permease [Enterococcus faecium TX1330] gi|257888973|ref|ZP_05668626.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896721|ref|ZP_05676374.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|293378639|ref|ZP_06624799.1| putative membrane protein [Enterococcus faecium PC4.1] gi|293572911|ref|ZP_06683861.1| hypothetical protein EfmE980_2615 [Enterococcus faecium E980] gi|227179760|gb|EEI60732.1| permease [Enterococcus faecium TX1330] gi|257825029|gb|EEV51959.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833286|gb|EEV59707.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|291607039|gb|EFF36411.1| hypothetical protein EfmE980_2615 [Enterococcus faecium E980] gi|292642770|gb|EFF60920.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 393 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 122/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 50 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 107 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ +T + + ++ Sbjct: 108 EEQTKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFTSIDDVTSDIAGFIGNYWESG 167 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF R+ Q + ++ F +K ++ Sbjct: 168 -----AQRISNIFSTVTAIFITLFTGPIVTFFLLRNPQKFYQSVLAIVPPAFRTDFKNLT 222 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 223 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 283 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 341 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 342 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 373 >gi|292656983|ref|YP_003536880.1| Htr-like protein [Haloferax volcanii DS2] gi|291372863|gb|ADE05090.1| Htr-like protein [Haloferax volcanii DS2] Length = 433 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 126/366 (34%), Gaps = 26/366 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M + M W + ++ +L Y + F + L I + + PIY + + S Sbjct: 1 MALPDIQRSRAMWWSLALVLAGALTYVVYSFIGTFVFGLFIYYATRPIYWRIRRRVKPPS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 AV + + L + Y + ++E + + +P+ I + Sbjct: 61 LAAAVALFALALPV----LGLVVYAATIALREFLRYADRLSTDEVPIDLEAYGIDPTLLE 116 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L +L+ L + A+ + + MI F+ R Sbjct: 117 GIASPQALLEYDFRSVLTPEALGSVFDSL--SVAANTFAFLGVGAIHLFVMIAFAFYLLR 174 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG-- 237 DG + + S+ + R V + + F G + AI G + AY L Sbjct: 175 DGHRLRRWGQSMFADDHGIL-EAYMRGVDRDFNNIFFGNILNAILTGTIGVIAYSLLNVL 233 Query: 238 ------VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK-------GNIFNATCLFL 283 +P+ +G++ + ++IP G + + ++ Y+ ++ G F + Sbjct: 234 APAGVRIPAPALIGLLAGVASLIPVVGMKLVYVPIAGYMGLEAAIANPPGLWFVLLFAAV 293 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I I D LRP++ G L G G G+F+ P+++ L + Sbjct: 294 SFVIVDTIPDLVLRPYVSGRS--LHVGAVMLAYTFGPLLFGWYGIFLMPMILVLFVNFAR 351 Query: 344 ESIMAI 349 + + Sbjct: 352 LVLPEL 357 >gi|116512078|ref|YP_809294.1| permease [Lactococcus lactis subsp. cremoris SK11] gi|116107732|gb|ABJ72872.1| Predicted permease [Lactococcus lactis subsp. cremoris SK11] Length = 390 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 116/321 (36%), Gaps = 8/321 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A + + PI ++ V+ + + + + + + + Sbjct: 60 PVILAAVFYYLLNPIVDFLEKRRVPR-----VLTIIVLFLIIAALIAWGLIVAIPNVISG 114 Query: 93 VSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + H + + ++ + + + +S+ + KT ++ + Sbjct: 115 VDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKTFSVNAVTT 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S +S+I LF+ RDG ++ + L + + K+ + + Sbjct: 175 L-SHLISKTTSILISLIVFPFVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLHEINSQL 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 + G ++AI ++ + G+ VAL + + ++P G+ ++ + I L Sbjct: 234 SNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIPMVIVGL 293 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + + IE + + + P ++G + + + F L+ + +G+ G+ + Sbjct: 294 AIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILGVWGVLL 353 Query: 331 GPVLMALIAVIWKESIMAIKE 351 A + VI +E Sbjct: 354 AIPFYATLKVIIVHVYEWYRE 374 >gi|322372869|ref|ZP_08047405.1| membrane protein [Streptococcus sp. C150] gi|321277911|gb|EFX54980.1| membrane protein [Streptococcus sp. C150] Length = 392 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 132/360 (36%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPI---YSSF 51 +LN Q ++ ++I+ +I +++ + F ++ L+I + + Sbjct: 18 VLNNQAVVAFLILLLIGLTVLIFTKISPIFSPVIDFLTIIMLPLVISTLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K S T ++ + L ++ + ++ L+ Sbjct: 78 VEKTGLSRTMSILVIYAILALLLVLGISTAIPSLQNQILILIRNTPSYIARANSEAERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++P LS + + ++ + ++ FAS + ++II Sbjct: 138 NLPFLSNYRGDLEAMLSDFSARMVNYAENFSSSALTWVGTFASTVARVT----VAIILAP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + Q S+ F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKMKQGFVSVLPTRFRETTVRMLSDINNQLEGYVQGQVTVAIVVAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ V G++ + M+P G+ ++ V I L++G + + IE Sbjct: 254 MFKIVGLRYGVTFGIMAGFLNMVPYLGSFLAMVPVVIMGLVQG-PAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ KE + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVVKEIFDWYR 372 >gi|253577604|ref|ZP_04854915.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843022|gb|EES71059.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 362 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 126/343 (36%), Gaps = 12/343 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTF 61 +G +I+ I+ ++ FF +L L++ + + + E+ Sbjct: 12 RGAKFVLILLAIVYVFSLVRPFFRPMEAVIGALLIPLLLSGFFYYLLRPVVQYMEKHKIR 71 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + + I+ + F+ + +L++ V Q + L + + + Sbjct: 72 RSLAILILYVVMAILAMAFIAVVWPMLQAQLINLVQNIPQFISLLEERLKEWGELPFLAS 131 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + + GI F+ + S F + + + I L++ ++G Sbjct: 132 IFPSDSGLADNFSEYL-----SQGISFLTNYLSGFFSFLSQFAIVMFTFPILLYYMLKEG 186 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L + + + + K + +G I+ G+++ + + G+P Sbjct: 187 HRFKRSLVKLSPIRYRKEVYRATIEMDKALNDYIIGRVIVNAALGVLMFIGFLIIGLPYA 246 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L I IM IP I + + + + + + I D + P++ Sbjct: 247 LLLTTIAVIMNFIPLFGAIISAIPIVIIGLIESPSTGIWALVIILLAQQIQDNVISPYVF 306 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + + + T ++G G++G+ I + L+ + WK Sbjct: 307 GKKLDIHPVTTILLVLGSGNWFGIIGMLIVIPVYMLLKIAWKR 349 >gi|261855341|ref|YP_003262624.1| hypothetical protein Hneap_0728 [Halothiobacillus neapolitanus c2] gi|261835810|gb|ACX95577.1| protein of unknown function UPF0118 [Halothiobacillus neapolitanus c2] Length = 363 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 123/339 (36%), Gaps = 10/339 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + +Y L P L+ +++ + P+ + + K T+ +F V Sbjct: 9 LALAMYIVYLLSPILTPFLAGVVLAYLFDPLVTRMVGWKINR--------TLGTTVVFFV 60 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + G+ + ++++ V + L D ++L + + + Sbjct: 61 ILLVMILAGLALVPVVINQAVKLISVFPKLLAMLQDQLVPYINAKLGLDINLNSMTQLTV 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + G + +++I + + F+ RD + Q++ L Sbjct: 121 QHAQEIGSVLAKSATVVFGNGSAVVLSMMNLILIPVIGFYLLRDWPHLLQRIQELMPRRQ 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 W +++ +++ G + + G+ + G+ + V +G+ +++ +P Sbjct: 181 EPQWVALAQESNQMLGGFLRGQLAVMLANGITYAIGLTIVGLETGVVIGMAAGMLSFVPY 240 Query: 257 GAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + ++ + G + L I + +P VG I L + F Sbjct: 241 LGNVIGITTALIAMYIQTGEFTPLLWVLLVFGIGQTLESILWQPRFVGERIGLHPVAVIF 300 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G G G+ + + A++ V+ + ++ +E+ Sbjct: 301 AVMAGGVLFGFFGVLLALPVSAILVVLGRHALKRYRESP 339 >gi|311743457|ref|ZP_07717263.1| integral membrane protein [Aeromicrobium marinum DSM 15272] gi|311312587|gb|EFQ82498.1| integral membrane protein [Aeromicrobium marinum DSM 15272] Length = 382 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 108/299 (36%), Gaps = 14/299 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV A+I+ P + SK S A + + + L + L + ++ Sbjct: 55 PVALAIIVSTVLAPPVTWLRSK-GLPSVAAAGLVMIGFLGLITTLVAILTPQVAGQAPDI 113 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + Q V WL D P + T+ + Q S + I Sbjct: 114 ADQASRGLQK---VRDWLIDGP-MQLSDAQITRAVGALQDRIQDSAAAISAGIFSTISTA 169 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S L+++ ++I F F +DG + SLG + ++ + + Sbjct: 170 TS--------VVLNLVVILILTFLFIKDGHRFLPWVASLGGRRAGHHLTEVLGRSWETLG 221 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LI 271 +I+A+ ++G A + GVP V L V+T + IP A+++ + L+ Sbjct: 222 GFIRTQSIVALISATIIGIALAIVGVPLAVPLAVVTFFGSFIPIIGAFVTGALAVLVTLV 281 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G+ +A + L + L P+L G + L ++ G G+ G F+ Sbjct: 282 TGSPQDALVILLVFVGVQQLEGNLLSPWLQGKTMNLHAAVILLAVLAGGSLFGITGAFL 340 >gi|30264667|ref|NP_847044.1| hypothetical protein BA_4841 [Bacillus anthracis str. Ames] gi|47530136|ref|YP_021485.1| hypothetical protein GBAA_4841 [Bacillus anthracis str. 'Ames Ancestor'] gi|65321963|ref|ZP_00394922.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] gi|30259342|gb|AAP28530.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Ames] gi|47505284|gb|AAT33960.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. 'Ames Ancestor'] Length = 365 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L ++ G P + A + P+ + K + +++ + V + + +L Sbjct: 18 ALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLV 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ V + + + + +L +K + + ++ Sbjct: 78 TEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQ 137 Query: 143 TNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G + I + F ++F+++A FF D ++Q++ Sbjct: 138 NLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISNDWHRLAQKVRKFL 197 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + Y K I + K + + +++ + VP + + +IT ++ Sbjct: 198 PNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVD 257 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G F IY+ G+ A L + + + + + + P ++ I L L Sbjct: 258 LLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPKVLSSNIGLDPLA 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 T L G + G LGL IGPV + L+ + K + Sbjct: 317 TLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|77407806|ref|ZP_00784559.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|77173553|gb|EAO76669.1| membrane protein, putative [Streptococcus agalactiae COH1] Length = 396 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 131/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +D+ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPADRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|282865805|ref|ZP_06274855.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282559449|gb|EFB65001.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 372 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 124/354 (35%), Gaps = 17/354 (4%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +++ + V+L+ L P++ L + +WP+ + F+ K+ A + Sbjct: 21 SAELLLVLVMAGVTLWILGRMWPVVWPLVVGLFLTTLTWPL-ARFLRKRGWPPALAASVV 79 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV + + + + + +L V+ Q L + G + + Sbjct: 80 TVLFLLVVGGIVALIAVPVASQSGQLTDGVIAGIQK-------LREWAAGPPLNIDDAQI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L + + ++ ++ ++ + + +FFF +DG Sbjct: 133 SHALDAGIDRIQNSLGSTVTTVVTGLST-----VVNGVVTAVLSVFLMFFFLKDGPRFLP 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ + S + + + + +G W+ GVP + L V Sbjct: 188 WLTRQLPGRLATDIPTVAERGWDTLGSFVRSQAFVGMLDAVFIGLGLWILGVPLVLPLAV 247 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + A +P GA + + L+ + +A + + + + +P + + Sbjct: 248 LTFVSAFVPIIGALFAGFVAVLIALVSNGLTDAIIVLVIIIVVQQLEGNVFQPMIQSRGL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G + LIAV+W + + ++ ++ Sbjct: 308 GLHAAVVLLAVTLGGSLAGIVGSLLAVPAAGLIAVVWSYVREQLSDQPQEPETD 361 >gi|323137707|ref|ZP_08072783.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322397004|gb|EFX99529.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 415 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 120/348 (34%), Gaps = 17/348 (4%) Query: 9 QGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +M W + F+ + LYFL AP ++ +G+ P+ + S A+I Sbjct: 50 RQLMLWGLSFVGLAAILYFLSPVLAPFVAGTALGYLLDPVADRM-QRWGVSRLGAALILL 108 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L+ L ++ ++ + Q + S + +E K+ Sbjct: 109 AGFIAFVVTALIILLPILSHQLAGFITALPGYLQTLHGLVTEWSSSFTSEYINEWLQKYG 168 Query: 128 SHPQSLKILSETF---LKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L + G I F G ++ I+ + F+ D Sbjct: 169 LGAAGASFDAQKYFNDLASQGAALIGDFLKSLVWRGYALINVVSLIVITPVVAFYMLLDW 228 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +D L + ++R + + + G +++ + G+ G+ Sbjct: 229 DHMVEIIDDLIPPRHRDDVRMLARDIDRALAGFVRGQSLVCLFLGVWYAVGLSAIGLNFG 288 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI------FNATCLFLWGAIELFIVDKT 295 +GVI I++ IP I+ SI + I A + G I Sbjct: 289 FLIGVIAGILSFIPYVGSITAFVFSIIISIVQAWPHINLPIEAVAIVTTGLIMDG---YV 345 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L P LVG + L + F L+ G GL I A + I + Sbjct: 346 LSPRLVGASVGLHPVWIMFALLAFGALFGFTGLIIAVPTAAALGAIMR 393 >gi|324990266|gb|EGC22204.1| permease [Streptococcus sanguinis SK353] Length = 364 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 123/347 (35%), Gaps = 17/347 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F E+ +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLEKCRVPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FP----AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P + ++ + +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPGKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 T + G GL+G+ + A+I + +E ++ +E K I Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKALIKE 364 >gi|291556593|emb|CBL33710.1| Predicted permease [Eubacterium siraeum V10Sc8a] Length = 468 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 101/304 (33%), Gaps = 4/304 (1%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGM 117 I + + + + L + + LV+ + Q V + L + P Sbjct: 108 RVMSVAITMILALLILTGIIWVLLPQLIDTITMLVNNMPEYVTQISDWVSQTLRNYPEVE 167 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGID-FIPRFASRFGMIFLDYCLSIIFMIIALFF 176 +T +S + + +E + N I I +F++ L + I L Sbjct: 168 AYVLQFTGGISDMLNNWLSTELLPQMNNIWNLISSNVMNIISVFMNLLLGFVIAIYFLNS 227 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + L L + +R V K G + + G+V + Sbjct: 228 KELFAAQFKKILYCLFKPKVATKIINSTREVNKSFGQFITGKILDSFIIGMVYVLLMSIF 287 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P V GV+ I +IP G I F + L++ + + I I Sbjct: 288 NMPYAVLCGVVMGIFCIIPYFGPFIGFIPCMLLLVLV-DPIQCIYFTIMVVIIQNIDGNV 346 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G L FG++ G G +GL IG L A++ K + E K Sbjct: 347 LAPKIIGDSTGLSSFWVIFGMLVGQGLFGFVGLIIGIPLFAVVYSFTKNRVKKRLEKKAL 406 Query: 356 ISSN 359 S + Sbjct: 407 PSDS 410 >gi|227487862|ref|ZP_03918178.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092189|gb|EEI27501.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 469 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 119/337 (35%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +++ + + + + + G P AL+I WP + + + A++ Sbjct: 68 LRLLVIGVTVYAGWRILGALWQGVLPAALALLISSVLWPPAAWLKRHRLP-AWLAALVTM 126 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V+ F + + + + L + V A Q + W + P + + + Sbjct: 127 ITVLGAFSAIIALIAPGVARQSQTLYFQSVDAIQR---LQLWAQEPPLSLKGEDF---NR 180 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ + + G F A+ + +I FF +DG Sbjct: 181 IFGEAVAWIQQQAGNIAGGVFAGLGAAS------SLLVLATITLIITFFVLKDGERFMPW 234 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ + + ++A+ + +++G + +P +AL + Sbjct: 235 ARAFTGRQVGWHLTELLTRCWNTLSNYIRVQALVALIDAVLIGLGLVVMKIPMALALATL 294 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + +P GA ++ T L+ + A + + I + L P L + Sbjct: 295 TFVAGFVPIVGAFVAGTVAVAIALVTMGLTKALMVLILILIVQQLEGNVLSPMLQSKAMN 354 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G + + A +AV+ + Sbjct: 355 LHPAVVILVVTVGGGLFGIAGALLAVPITATVAVLLR 391 >gi|256789937|ref|ZP_05528368.1| integral membrane protein [Streptomyces lividans TK24] Length = 359 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 128/349 (36%), Gaps = 17/349 (4%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ ++ V+L+ L ++ P+L L++ +WP + F+ + A + TV+ Sbjct: 21 LLILVMLAVTLWVLGRMWSVVWPLLVGLLLTTLTWPP-ARFLRRHGWRPALAATVVTVAF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + + EL VV Q L + G + + Sbjct: 80 LLVVLGIVALIAVPMSSQTDELTDGVVEGIQR-------LREWAAGPPLNIGDDEITGAM 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + + I + ++ ++ + + +FFF +DG L Sbjct: 133 DSAVARIQDSVGS-----ITTAVATGVGAVVNGLITAVLGVFLMFFFLKDGPRFLPWLAR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + S ++ + + + +G W+ GVP + L V+T + Sbjct: 188 QLPGRLATDVPVVALRGWETLGSFVRSQALVGLLDAVFIGLGLWILGVPLVLPLAVLTFV 247 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + +A + + + +P L + L Sbjct: 248 SAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPILQSRGLGLHA 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + ALIAV+W + E E ++ Sbjct: 308 AVILLAVTLGGSLSGIVGSLLAVPFAALIAVVWTYVREQLSERPEATAT 356 >gi|21219049|ref|NP_624828.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|289773819|ref|ZP_06533197.1| integral membrane protein [Streptomyces lividans TK24] gi|6066628|emb|CAB58273.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|289704018|gb|EFD71447.1| integral membrane protein [Streptomyces lividans TK24] Length = 363 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 128/349 (36%), Gaps = 17/349 (4%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ ++ V+L+ L ++ P+L L++ +WP + F+ + A + TV+ Sbjct: 25 LLILVMLAVTLWVLGRMWSVVWPLLVGLLLTTLTWPP-ARFLRRHGWRPALAATVVTVAF 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + + EL VV Q L + G + + Sbjct: 84 LLVVLGIVALIAVPMSSQTDELTDGVVEGIQR-------LREWAAGPPLNIGDDEITGAM 136 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + + I + ++ ++ + + +FFF +DG L Sbjct: 137 DSAVARIQDSVGS-----ITTAVATGVGAVVNGLITAVLGVFLMFFFLKDGPRFLPWLAR 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + S ++ + + + +G W+ GVP + L V+T + Sbjct: 192 QLPGRLATDVPVVALRGWETLGSFVRSQALVGLLDAVFIGLGLWILGVPLVLPLAVLTFV 251 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + +A + + + +P L + L Sbjct: 252 SAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPILQSRGLGLHA 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + ALIAV+W + E E ++ Sbjct: 312 AVILLAVTLGGSLSGIVGSLLAVPFAALIAVVWTYVREQLSERPEATAT 360 >gi|303240125|ref|ZP_07326646.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] gi|302592394|gb|EFL62121.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] Length = 357 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 116/338 (34%), Gaps = 8/338 (2%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + +I+ +L Y + F AP + A+II + P+ SK + ++ Sbjct: 10 NQLASILIVAGLLFGAYVGIKYVIAFLAPFILAVIISSINEPVVRFLESKAKMDRKAASI 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + +C+ + + + E+ +L + + + + + Sbjct: 70 SSLILSVCVIAAIAVLVLFKTYGELIKLQRNLPAYIDSSSYILSGYYSRINSFYNNLPYQ 129 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S ++L + I I + +++ +F D +I Sbjct: 130 VQSSFRENLLVFLPKI--EGLITSIATSIINSITSLPKLGVFTTVTLLSSYFISSDRKNI 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I F II +V + + V + Sbjct: 188 RNFIYRQIPNRSQKNFYTVKNGTVSSIFGYFRAQMIIMTVTFVVSTLGFIIINTEYAVLM 247 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G+ITA+ IP G+ I I+ I GNI L + IV + + P +V Sbjct: 248 GLITALADGIPLLGSGIVMIPWIIWNFITGNIRMGLGLSSVYLFAV-IVRQIIEPKIVSN 306 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L T + G+ G+ GLFIGP++M + + Sbjct: 307 QTGLHPLVTLISMYLGLMIFGVTGLFIGPIIMIFLKSL 344 >gi|227537931|ref|ZP_03967980.1| permease [Sphingobacterium spiritivorum ATCC 33300] gi|227242233|gb|EEI92248.1| permease [Sphingobacterium spiritivorum ATCC 33300] Length = 396 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 116/332 (34%), Gaps = 15/332 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ +Y + P+L ++II T +PI + K + A+++ + + + Sbjct: 18 LFALVLIIALMYVTQSVLVPLLFSIIISITLFPIANFLERKLHFVRSLAAIVSVIIAILI 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + F+ + E + + + V G + + S + Sbjct: 78 IGGLIWFI----VHESIIIGKDATDITKKVMSVVESFQSWVEGRFGVQR-----SEMAAQ 128 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + N ++ G L IF+ L+ YRD + Sbjct: 129 FQEQSNKMLNNVGGYLSTAFGSIGSTLAGMVLVPIFIFFLLY--YRD--FFKEFFFKAFP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + +VI+S FLG+ + ++ + + G+ G + + + + Sbjct: 185 NTENQKVHGVLNRIYEVIQSYFLGLVTVMGIVAVLNTAGLMIMGIEYAWFFGSLASFLML 244 Query: 254 IPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P L K + + A + W + F+ + P +VGG + + L Sbjct: 245 LPYIGIAIGSILPALFALATKDSAWYAIGVIAWFQVVQFLEGNIITPNIVGGKVSINPLM 304 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G GL GL + + A + VI+ Sbjct: 305 AIIAILIGGMIFGLAGLILALPMTAALKVIFD 336 >gi|293400193|ref|ZP_06644339.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306593|gb|EFE47836.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 384 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 122/342 (35%), Gaps = 10/342 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFL 81 + L + +L A ++ + K + + + +I+ + + I + L Sbjct: 35 CIGLLAPILSGLLLAFVLSIPVRGLAKRLRRKLTKATDRQIDMISLLLTLICVIAIIALL 94 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ V + Q P W+ + +E + H + +L S Sbjct: 95 CVIAIPQLTASVKSIAALVQEKW--PDWVGLLQRYGIDTEKLSAHFA---ALDWKSILQS 149 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQLDSLGEHLFP 197 ++ ++ + + + + ++ F+ +S + L + + Sbjct: 150 ISSEMNTVISSVANVAGSTVSAIADVAISLVITFYVLIGWRELSSQSKRALYAYCKESVA 209 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 IS++ G + + G ++ ++ +AG+P V+TA A +P Sbjct: 210 DRICHISKLAHDTYAKFLSGQCVEVMILGTLIFLSFSVAGIPYAGLTAVLTAAFAFVPYI 269 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A I + A F+ F+ ++ + P +VG + L T ++ Sbjct: 270 GGFLSCAFGILFTLLAAPNKALLCFIVYQATQFVENQFIYPHVVGNSVGLSPFWTLLAVL 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + G+LG+ LMAL++ + ESI ++ SN Sbjct: 330 LGGKLFGVLGMIFFIPLMALVSQLLHESIERRLHTRKPELSN 371 >gi|257893855|ref|ZP_05673508.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|257830234|gb|EEV56841.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] Length = 393 Score = 96.4 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 122/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 50 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 107 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ +T + + ++ Sbjct: 108 EEQTKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFTSIDDVTSDIVGFIGNYWESG 167 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF R+ Q + ++ F +K ++ Sbjct: 168 -----AQRISNIFSTVTAIFITLFTGPIVTFFLLRNPQKFYQSVLAIVPPAFRTDFKNLT 222 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 223 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 283 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 341 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 342 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 373 >gi|328554823|gb|AEB25315.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208] gi|328913184|gb|AEB64780.1| putative integral inner membrane protein [Bacillus amyloliquefaciens LL3] Length = 368 Score = 96.4 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 118/324 (36%), Gaps = 13/324 (4%) Query: 25 YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + + FF P+L + I+ F PI K T ++ + + L Sbjct: 28 FIFQPFFGFITTLFFPILISGILFFIFNPIVRLLEKKIP--RTLAILLIYLVFIGLIAFM 85 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + ++ L + + LS W + + T+ + ++ Sbjct: 86 FTAIGPIVASQVTGLFNNFPDYINQIQSLTTQLSH---SKWFTWMMTQDYVSIEKIQQSL 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 FL++ + ++ FG++ + L +I + LF+ +DG + + Sbjct: 143 TGFLQSLPQNITASLSAVFGVVT-NITLVVITVPFILFYMLKDGRRFPLLAVKILPSSYR 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A +KI + + + F G +I + G YW+ G+P + LG++ A+ +IP Sbjct: 202 AEGRKIFNDLYVTLAAYFQGQLLICLFVGTACFIGYWIIGLPYALILGMVIAVTNIIPYL 261 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + + A + + + L P ++G + L LV Sbjct: 262 GPFLGAAPAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILLLV 321 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G G+L + + + A++ Sbjct: 322 GAGSFGGILAMILAVPVYAVLKAF 345 >gi|281491674|ref|YP_003353654.1| hypothetical protein LLKF_1206 [Lactococcus lactis subsp. lactis KF147] gi|281375392|gb|ADA64905.1| Hypothetical protein LLKF_1206 [Lactococcus lactis subsp. lactis KF147] Length = 390 Score = 96.4 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 115/321 (35%), Gaps = 8/321 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A + + PI K+ V+ + + + + + + + Sbjct: 60 PVILAAVFYYLLNPIVDFLEKKRVPR-----VVTIIVLFLIIAALIAWGLIVAIPNIISG 114 Query: 93 VSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + H + + ++ + + + +S+ + K ++ + Sbjct: 115 VDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKAFSVNAVTT 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S +S+I LF+ RDG ++ + L + + K+ + + Sbjct: 175 L-SHLISKTTSILISLIVFPFVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLHEINSQL 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 + G ++AI ++ + G+ VAL + + ++P G+ ++ + I L Sbjct: 234 SNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIPMVIVGL 293 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + + IE + + + P ++G + + + F L+ + +G+ G+ + Sbjct: 294 AIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILGVWGVLL 353 Query: 331 GPVLMALIAVIWKESIMAIKE 351 A + VI +E Sbjct: 354 AIPFYATLKVIIVHVYEWYRE 374 >gi|157961796|ref|YP_001501830.1| hypothetical protein Spea_1973 [Shewanella pealeana ATCC 700345] gi|157846796|gb|ABV87295.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 369 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 140/357 (39%), Gaps = 15/357 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + +I+ +++YF G AP+L AL++ F WP+ +++ + T A + Sbjct: 15 DPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQ--MARIGINRTTAASL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWT 124 V + L ++ L + L++ + G+ + +++ P + S+L Sbjct: 73 VLVLFIGLMLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINKYPQFVNPSQL-- 130 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + L T + I + + L + +I + + +FFF +D + Sbjct: 131 ------DTMVAELKKMLDTQHLLDIGKQLLGYSASLLVLMVYVILIPLLVFFFLKDKDEL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +K+ + + I + G I + G+ + L + L Sbjct: 185 IKGSKRFFPT-NRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYAALL 243 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVG 302 GV+T + +IP GA + +++ ++ + G + +D L P L Sbjct: 244 GVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPLLFS 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + ++ G+ G+F L +L+ + + +++KI ++ Sbjct: 304 DAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEAS 360 >gi|108762102|ref|YP_633773.1| hypothetical protein MXAN_5634 [Myxococcus xanthus DK 1622] gi|108465982|gb|ABF91167.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 424 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 105/356 (29%), Gaps = 30/356 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS----TFLAVIATVSVMCLFIVPLLFLF 82 + P A +I + P+ K ++ + ++ L Sbjct: 51 FRSVVMPFAGAALIAYLVQPLVGRISRVKVAGRPVPRWTALLLIYAGFFVGVYLFIVALV 110 Query: 83 YYGMLEMKELVSKVVLANQHGIP---------VPRWLSD--IPGGMWASEL--------- 122 E+ + + V P WLS IP + L Sbjct: 111 PQLYRELSRVSREAVTFANTLTPEHVQELAQRAETWLSTRGIPVALSNRALEGADAGSSN 170 Query: 123 ----WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + L + + L + I + + F+++ FF Sbjct: 171 GTFGFALDLEQFLGDAVKRVSILVQENLGDIVNVSRSIVTSVAAGVFMLFFVLMVAAFFS 230 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +I + +L + +++ + + + G I I G++ L GV Sbjct: 231 IDAHAIRRYFGTLIPPEYAIDARQLLERIDRSLSGVVRGQVTICIVNGILTFMGLLLFGV 290 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 L I ++IP G +S + + L G + W + L Sbjct: 291 KFAFLLATIATFFSLIPIFGTILSSVPIVLIALADG-FQKGLAILAWIIGIHAVEAYFLN 349 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++G L + F L+ G R GL+G + +++ + + + + Sbjct: 350 PKIMGQAAHLHPVIVAFSLIAGERLFGLVGALFAVPVASVLVACFDYARLKAQPAP 405 >gi|19745999|ref|NP_607135.1| hypothetical protein spyM18_0995 [Streptococcus pyogenes MGAS8232] gi|19748162|gb|AAL97634.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 393 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVDKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|326406731|gb|ADZ63802.1| permease [Lactococcus lactis subsp. lactis CV56] Length = 390 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 115/321 (35%), Gaps = 8/321 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A + + PI K+ V+ + + + + + + + Sbjct: 60 PVILAAVFYYLLNPIVDFLEKKRVPR-----VVTIIVLFLIIAALIAWGLIVAIPNIISG 114 Query: 93 VSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + H + + ++ + + + +S+ + K ++ + Sbjct: 115 VDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKAFSVNAVTT 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S +S+I LF+ RDG ++ + L + + K+ + + Sbjct: 175 L-SHLISKTTSILISLIVFPFVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLHEINSQL 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 + G ++AI ++ + G+ VAL + + ++P G+ ++ + I L Sbjct: 234 SNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIPMVIVGL 293 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + + IE + + + P ++G + + + F L+ + +G+ G+ + Sbjct: 294 AIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILGVWGVLL 353 Query: 331 GPVLMALIAVIWKESIMAIKE 351 A + VI +E Sbjct: 354 AIPFYATLKVIIVHVYEWYRE 374 >gi|255026696|ref|ZP_05298682.1| hypothetical protein LmonocytFSL_10790 [Listeria monocytogenes FSL J2-003] Length = 398 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGL---SNNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 130 LKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|229493922|ref|ZP_04387694.1| integral membrane protein [Rhodococcus erythropolis SK121] gi|229319199|gb|EEN85048.1| integral membrane protein [Rhodococcus erythropolis SK121] Length = 397 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 17/308 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ + PV A+++ WP I + A I V + + + + Sbjct: 52 LWVI---ILPVALAIVVATVMWPPTRGMIKR-GMPPAAAAGITLVLSIGILAGVIAGIVP 107 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + EL +K V WL P + + + Sbjct: 108 SVVSQAPELANKTTEGIN---QVQDWLQGPPLNLK---------DDQIDNAVHAVITKVQ 155 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I +++ ++I FFF +DG L ++G + +++ Sbjct: 156 ESGTAIASGVFSGVSTASSLLVTLGLVLILAFFFIKDGPRFIPWLHAVGGGRAGRHLEEV 215 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + + ++++ + + +G+ + GVP L ++T I IP GA ++ Sbjct: 216 LTRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFIGGFIPIVGAFVAG 275 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ + A + + I L+P L +KL + + G Sbjct: 276 ALAVLVALVANGLTTAIIVLIIILAVQQIEGNVLQPVLQSKSMKLHAVIVLLAVAAGSSL 335 Query: 323 MGLLGLFI 330 G++G F+ Sbjct: 336 YGIVGAFL 343 >gi|222153253|ref|YP_002562430.1| membrane protein [Streptococcus uberis 0140J] gi|222114066|emb|CAR42470.1| putative membrane protein [Streptococcus uberis 0140J] Length = 393 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 138/361 (38%), Gaps = 21/361 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN + ++ MI+ ++ ++++ FL P++ + I+ + + P+ Sbjct: 18 ILNNKAVVGLMILLVVFLTIFVFTKISFLFSAVGSFLTILMLPLVISTILYYLTKPLVD- 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 FI K + + VI ++C+ I L + +S + + L Sbjct: 77 FIEKLGPNRSVSIVIVFGLIICVLIWAFSGLIPMISDQTTTFISDLPKYVETMDKEATKL 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + L++ + N I++ FAS I +SII Sbjct: 137 LENKWLVNYKAELQDMLTNISQKALDYAESFSKNAINWAGNFASAIARIT----VSIIIS 192 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+F RD + L ++ ++ + + + G +AI G + G Sbjct: 193 PFILFYFLRDSSMMKDGLVNVLPTKVRIPISRVLGDINQQLSGYVQGQVTVAIIVGFMFG 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+ + + + M+P G+ ++ V I +++G I L ++ IE Sbjct: 253 IMFSIVGLKYSITFSIAAGFLNMVPYLGSFLAMIPVVIMAMVQGPIMLIKVLIIF-TIEQ 311 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P ++G + + + F L+ G+ G+F+ A + VI KE Sbjct: 312 TIEGRFVTPLVLGNKLSIHPITIMFLLLTAGAMFGVWGVFLVIPFYASVKVIVKELFEWY 371 Query: 350 K 350 K Sbjct: 372 K 372 >gi|25011316|ref|NP_735711.1| hypothetical protein gbs1267 [Streptococcus agalactiae NEM316] gi|76798341|ref|ZP_00780585.1| transport protein [Streptococcus agalactiae 18RS21] gi|77412788|ref|ZP_00788993.1| putative membrane protein [Streptococcus agalactiae 515] gi|23095740|emb|CAD46926.1| Unknown [Streptococcus agalactiae NEM316] gi|76586292|gb|EAO62806.1| transport protein [Streptococcus agalactiae 18RS21] gi|77161084|gb|EAO72190.1| putative membrane protein [Streptococcus agalactiae 515] Length = 396 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 131/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +++ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNVLEWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGIIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|320546512|ref|ZP_08040827.1| membrane protein [Streptococcus equinus ATCC 9812] gi|320448897|gb|EFW89625.1| membrane protein [Streptococcus equinus ATCC 9812] Length = 395 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 135/361 (37%), Gaps = 21/361 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q + ++ FI+ ++LY FL P++ + I+ + P+ + Sbjct: 18 VLNSQATVAILVTFIVFLTLYLFTKISFLFEPVLAFLAIIMLPLVISAILYYLIKPL-VA 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 FI ++ S T I ++ L I + ++K + + + L Sbjct: 77 FIERRGFSRTTSIFIVFAIIIALIIWAVASFIPMIEGQVKSFIENLPAYVKSVNIEGSKL 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P L + + + N D+ FAS + ++II Sbjct: 137 LRSPWLSNYQTELQDMLVNISNKAVDYAESFSKNAFDWASNFASAIARVT----VAIIMS 192 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+F RD + L +I + K + G +AI G++ Sbjct: 193 PFILFYFLRDSHKMKDGLIKALPTKMRRPSARILGDINKQLAGYVQGQVTVAIVVGIMFT 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+ G+I + MIP G+ ++ V I +++G I L + IE Sbjct: 253 VFFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGIVQGPIMLVKVLVTF-VIEQ 311 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P ++G + + + F L+ G+ G+F+G + A I V+ KE Sbjct: 312 TIEGRFVAPLVLGSKLSIHPITIMFILLTSGSMFGIWGVFLGIPIYASIKVVVKEIFDWY 371 Query: 350 K 350 K Sbjct: 372 K 372 >gi|282880125|ref|ZP_06288845.1| membrane family protein [Prevotella timonensis CRIS 5C-B1] gi|281305998|gb|EFA98038.1| membrane family protein [Prevotella timonensis CRIS 5C-B1] Length = 385 Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 132/352 (37%), Gaps = 23/352 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ ++ + +L P A + + +P+ K LA+I T+ + Sbjct: 34 ILLIIVVFYLVNYLSSVLLPFFIAWLFAYLLYPLVKFVQYKMHVKVRSLAIIITMLAVLG 93 Query: 74 FIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + +++ M+E + +++ + H ++S W + Sbjct: 94 VMAGVVYAIIPSMIEQIDKLNNILNNWISQTTHSSDFGSYISQ----------WVEKNQA 143 Query: 130 PQSLKILSETF--LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S+ F L + + + I + S+I ++ FF +D ++ Sbjct: 144 GIEKFMKSKDFSELVKTTMPKLFSIVGQTASIIISVVASLITLLYT-FFILQDYEFLTDN 202 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +W ++ + V + + + G ++++ G++ G + P +ALG++ Sbjct: 203 WIRIFPKKNRPFWSELMQDVERELNNYIRGQGLVSLCLGILFGIGLTIIDFPMAIALGIM 262 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG------AIELFIVDKTLRPFLV 301 +M ++P ++ ++ ++K L ++G I I D L P ++ Sbjct: 263 MGLMNLVPYLHTLALVPMAFLAMLKAADTGQNFLIVFGLSLLVFLIVQVISDTVLTPKIM 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L +G +GL + L L+ WK+ + K+ + Sbjct: 323 GKAMNLNPAILLLSLSIWGTLLGFIGLIVALPLTTLLIAYWKKYVTQEKQQE 374 >gi|46199976|ref|YP_005643.1| permease [Thermus thermophilus HB27] gi|46197603|gb|AAS82016.1| permease [Thermus thermophilus HB27] Length = 365 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 115/333 (34%), Gaps = 8/333 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + +L+A + P+ + ++ + + ++ + + L + FL ++ Sbjct: 34 WPALSVLLTAFAFAYLVHPLVQALERRRLPRAVGVVLVYLLLGLFLAL--ASFLAAQTVV 91 Query: 88 EMKELVSKVVLANQHG----IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ L + + +P +P + + + + L L Sbjct: 92 ELSRLARDLPRLLDPLLAWLVALPDRAQAVPVPESLRPVLEELTRNLRGLLQGFLEALVR 151 Query: 144 NGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S G L + +I +F D + + ++ + + Sbjct: 152 WLQGLLAQGGSLLGFFTSLLGGVFQLFTALILSVYFLYDLPRLGRAALAVFPEPYQPLAQ 211 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + G ++A+ G ++G +WL GVP +LG + + +IP + Sbjct: 212 DLAAKLNASVGGYVRGQLLVALCVGFLVGLGFWLVGVPLAASLGFLAGVFNLIPFVGVVV 271 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L G + A L + L P +VG +L + ++ G Sbjct: 272 SGVPALLLAATGGLGKAALALLVMVAANQLEAHVLGPLIVGRATRLHPVTAIAAILTGGT 331 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G + A + V+ ++ + +E Sbjct: 332 LFGLWGALLAVPAAAFLKVVLEDYYKGSRFYRE 364 >gi|312112992|ref|YP_004010588.1| hypothetical protein Rvan_0199 [Rhodomicrobium vannielii ATCC 17100] gi|311218121|gb|ADP69489.1| protein of unknown function UPF0118 [Rhodomicrobium vannielii ATCC 17100] Length = 376 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 120/356 (33%), Gaps = 20/356 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+P +I+ + + L P + ++ + P+ ++ A Sbjct: 7 LSPHATFWVVIVALATMGLMVFSDVLMPFAAGFVLAYLFQPLVERL-NRIGVHRGAAAFA 65 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-----PRWLSDIPGGMWAS 120 + +FI L + ++++ + + Q P++L + + Sbjct: 66 IIAVLSLIFIAIFALLIPPLVDQLRQFAQDLPVYYQRARAYLWENYPQYLRSLQSTVQQQ 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E Q + + +LK + F + + I FF RD Sbjct: 126 EGGAA--GQAQDVAGMVAGYLKGLAESSLA---------FFNTLALLFLTPIVTFFLLRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +DSL +K++ V I GM I+ + L G+ Sbjct: 175 WDQMFASIDSLLPKRDAPTIRKLAGEVDDTISGYLRGMFIVLSILSIFYMVTLGLIGLNY 234 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLR 297 + +G+ I++ +P G+ L + + + G + L Sbjct: 235 GLLIGLFAGIISFVPYLGSTSGLLVAGGVALAQFAPDYSMVALVIGVFIFGQIIEGNVLT 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P +VG ++L + F LV +G GL I L A+I V+ + +I +E++ Sbjct: 295 PNIVGNQVRLHPVWLLFALVAAGYLLGFTGLLISVPLAAVIGVLVRFAIRKYQESE 350 >gi|89100980|ref|ZP_01173825.1| hypothetical protein B14911_01700 [Bacillus sp. NRRL B-14911] gi|89084316|gb|EAR63472.1| hypothetical protein B14911_01700 [Bacillus sp. NRRL B-14911] Length = 372 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 108/310 (34%), Gaps = 11/310 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P +A I + P+ ++V+ ++ + Y + Sbjct: 58 IFPFAAAAFITYLLHPVVERLHEAGLHRG--------LAVIIIYTLFFGGTGYALYKGLP 109 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ +H + + + + T P L+I +D + Sbjct: 110 AIIVQIRDLAEHAPQLADQYREW---LLLLQSKTSQWPEPVQLRIDEGIQSLEASLDRLL 166 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A F L++ L +I + F+ +D + + + L + R K Sbjct: 167 SRAMAFAGAILNFALILIIIPFISFYMLKDFLLMKKAVWYLTPKKWRESGSLFLRDADKS 226 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G ++ G + +W+AG+ + LG I +IP PI ++ + Sbjct: 227 LGSYIRGQLLVCAVIGALSSLFFWIAGIKYPLLLGAIIGATNVIPYFGPIIGAVPAVLIA 286 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++ + + F+ L P +VG + + L F L+ G G+ GL + Sbjct: 287 STMSVKMIIFAAVIVMVLQFLEGNILSPLIVGKSLHMHPLLIMFSLLAGGEIAGVAGLIL 346 Query: 331 GPVLMALIAV 340 ++A++ V Sbjct: 347 AVPVLAVLKV 356 >gi|319934792|ref|ZP_08009237.1| hypothetical protein HMPREF9488_00068 [Coprobacillus sp. 29_1] gi|319810169|gb|EFW06531.1| hypothetical protein HMPREF9488_00068 [Coprobacillus sp. 29_1] Length = 381 Score = 96.1 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 118/352 (33%), Gaps = 20/352 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-----ESSTFLAVIATVSV 70 IM I + +K F I+ F FI K A+++ + V Sbjct: 35 IMSFIGTLISIIKPFII----GFILAFIFNIPMKYFIKKLPIENDKTRKLISAILSVLLV 90 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + + ++ + + ++ L+ + + + WL+ + S + Sbjct: 91 MLVIAIVIMVVLPQVIENVRTLIDNLPEIFK---QIEEWLNYFLKEVKISPDIMTKVEEF 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q + + + I S F ++ + + I LF + +Q+ Sbjct: 148 QQTLGQTILSKLSTWVPGIALGVSHFTTGVINIFMGFVMAIYMLF----SKDKLMRQVKR 203 Query: 191 LGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +G+ + ++++ + G ++ G++ L +P V Sbjct: 204 VGKAFLTEKQFYHATDVAQLTSSTFENFLAGQLTESVIIGVLCYIGCILLDIPYASIAAV 263 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP PI +S L++ + A ++ + + P +VG + Sbjct: 264 VIGFTNIIPYFGPIIGAFISSVLIVFVSPMKAVIFLIFSTLLQQFESNLIYPHVVGNSVG 323 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L L F + G G+ G+ G ++I + + K+++S Sbjct: 324 LSALWVLFAVSAGGGLFGIPGMIFGLPTFSVIYELLRRWTNHRLNQKKQLSK 375 >gi|257899989|ref|ZP_05679642.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257837901|gb|EEV62975.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 393 Score = 96.1 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 122/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 50 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 107 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ +T + + ++ Sbjct: 108 EEQTKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFTSIDDVTSDIAGFIGNYWESG 167 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF R+ Q + ++ F +K ++ Sbjct: 168 -----AQRISNIFSTVTAIFITLFTGPIVTFFLLRNPQKFYQSVLAIVPPAFRTDFKNLT 222 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 223 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 283 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 341 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 342 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 373 >gi|239637047|ref|ZP_04678041.1| conserved hypothetical protein [Staphylococcus warneri L37603] gi|239597397|gb|EEQ79900.1| conserved hypothetical protein [Staphylococcus warneri L37603] Length = 413 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 135/358 (37%), Gaps = 18/358 (5%) Query: 10 GIMRWMIMFIILVSL----YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I++ Y + F AP++ +LII + P+ + + Sbjct: 43 GLLALVLLGIVIFIFDKVSYVFEPFIIIFNTIAAPIIVSLIIFYLFNPLVNLMERYRIPR 102 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ + + + + + + + +L S + + Q+ ++ + Sbjct: 103 -----LVGIMIIYIAIVGIIALIVNLLIPVIGSQLGSFINNSPQYFKKFTNTINKLTSNS 157 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + +++ SL T L F + A+ F + + I+ LFF Sbjct: 158 IFAGYYSQINDQLNSLTKKIPTMLSDYFDGFGSKLAT-FAEAVANVGVVIVTTPFVLFFM 216 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG ++ F + + + + S G I++ G++L Y + G Sbjct: 217 LKDGHKFKDFTTNIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLFIGYSIIG 276 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L I A+ +++P P + +I + I + L + + F + Sbjct: 277 LKYSLILACIAAVTSVVPYLGPTIAISPAIIIAIITSPLMVLKLAIVWTLVQFFEGHFIS 336 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P ++G +K+ L F L+ +G++G+ +G A++ V+ + K + Sbjct: 337 PNIMGKTLKIHPLTIIFILLCAGNLLGIVGVILGIPGYAVLKVLVSHVFLLFKRRYNR 394 >gi|25029191|ref|NP_739245.1| putative integral membrane protein [Corynebacterium efficiens YS-314] gi|259505812|ref|ZP_05748714.1| integral membrane protein [Corynebacterium efficiens YS-314] gi|23494479|dbj|BAC19445.1| putative integral membrane protein [Corynebacterium efficiens YS-314] gi|259166600|gb|EEW51154.1| integral membrane protein [Corynebacterium efficiens YS-314] Length = 461 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 93/293 (31%), Gaps = 28/293 (9%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP+ K A+ + + + + + +++ + Q Sbjct: 109 VLWPVTKFLRDHKWP-PALAAIATILGFFLIIGGIFSAIAPSVISQSQQVYERAYGGIQS 167 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 L + + P +L + + +I AS Sbjct: 168 -------------------LLDQLQNGPLNLDLGRVDEFVNDATQWIQDQASNIASGVFT 208 Query: 163 YC-------LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 ++I+ M + FFF +DG + L + ++ + Sbjct: 209 GVSAATTVVVTIVVMFVLTFFFLKDGVNFLPWLRKYTGDNAGWHLTEVLTRSWNTLAGFV 268 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 ++++ + +++G + VP +AL VIT IP GA + I L+ Sbjct: 269 RTQALVSLVDAVLIGIGLVILQVPLALALAVITFFGGFIPIIGAFTAGALAVIIALVTNG 328 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + NA + + I L+PFL G ++L + G G+LG Sbjct: 329 LTNALLVLALIVLVQQIEGNVLQPFLQGKAMQLHAAIVLLSVTVGSTLFGILG 381 >gi|146319150|ref|YP_001198862.1| permease [Streptococcus suis 05ZYH33] gi|145689956|gb|ABP90462.1| Predicted permease [Streptococcus suis 05ZYH33] Length = 391 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 123/329 (37%), Gaps = 13/329 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL+ P++ ++ + P+ K TV + LF++ L + + Sbjct: 55 FLEIVLLPMILTGLLYYLLNPMVDWMEKHKISR--------TVGISILFVLISLLIIWGL 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + +V Q+ + + G+ + + + + + Sbjct: 107 AVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIVAYA 166 Query: 146 IDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F +AS ++I+ M LF+ RDG +++ + + Sbjct: 167 QKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKWREPIGT 226 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + V + + G +AI L+ + + G+ + LGV+ + +IP G+ ++ Sbjct: 227 VLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIPYLGSFLA 286 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I LI G I + + IE I + + P ++G + + + F L+ + Sbjct: 287 MIPAVILGLIAGPIML-IKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFVLLTAGQ 345 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ +G + A I V+ K + K Sbjct: 346 MYGVLGVLLGIPIYASIKVLVKAAFEWYK 374 >gi|24379852|ref|NP_721807.1| putative membrane protein; permease [Streptococcus mutans UA159] gi|24377825|gb|AAN59113.1|AE014978_4 putative membrane protein; possible permease [Streptococcus mutans UA159] Length = 389 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 119/327 (36%), Gaps = 9/327 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL P++ + ++ + PI + V+A V + L++ Sbjct: 52 FLAVIMLPLVISALLYYLLKPIVDFIERRGTSR-----VMAITIVFVIIAGLLVWGIANF 106 Query: 86 MLEMKE-LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E L S + + V +S + + + + + + +T Sbjct: 107 FPMLNEQLTSFIKYLPSYVRSVDAQVSKLLRNDLLASFRPQIEDAVTNFSQKAVDYAETF 166 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + +A F + ++II +F+ RD + + S +I Sbjct: 167 SKGAV-TWAGNFASLIARVTVAIIISPFIVFYLLRDSSKMKEAFVSYLPTKMRQPIHRIL 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 V + + G +AI G + + + G+ V G+I + MIP G+ ++ Sbjct: 226 GDVNRQLAGYVQGQVTVAIIVGFMFSIMFTIIGLRYAVTFGIIAGFLNMIPYLGSFLATI 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V I L++G + L +E I + + P ++G + + + F L+ Sbjct: 286 PVFILALVEG-PVMVVKVALVFIVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTAGSMF 344 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+F+G + A I V+ KE K Sbjct: 345 GVWGVFLGIPVYASIKVVVKEIFEWYK 371 >gi|37521449|ref|NP_924826.1| hypothetical protein glr1880 [Gloeobacter violaceus PCC 7421] gi|35212446|dbj|BAC89821.1| glr1880 [Gloeobacter violaceus PCC 7421] Length = 351 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 127/354 (35%), Gaps = 22/354 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESS 59 T ++ ++R++++F +L L +F A ++ + Sbjct: 15 TRISTNALVRFLLLFACGWALLTLFSYFEYVITTFTFAAVLALLLNYPARYLERFVGRGA 74 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + VI ++ + +V L + ++++L + +V L + Sbjct: 75 SLAVVIVLSLILMVVVV--AGLGVTIVGQVQQLANAIVNTFNSSADPLTRLEEFLTARRI 132 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L + F+ + F+ + ++ I +++ FF Sbjct: 133 RIDLEPVQQQATELARNTIGFILGSLPSFLGSY------------VTFIVIVVVAFFMLA 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I L L A + S+ V F G +IA+ G + L +P Sbjct: 181 DGGRIWGLLIKF---LPAAQRVRFSQSVQSNFAGFFQGQLLIALFLGTASFVVFTLLQIP 237 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L + A+ +IPG GA + V + +L++G+ LF + D + P Sbjct: 238 FALVLAITVALFDLIPGIGATLGVGLVCLTVLVQGDWVATLKLFAACIALQQVQDNFIAP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ + L + FF L+ G R GL+G+F+ + ++ + K+ Sbjct: 298 RVMQSTVNLNPVIVFFALLVGARIGGLIGVFLAVPVAGVVVSLLDVEEAQSKQT 351 >gi|222148178|ref|YP_002549135.1| permease [Agrobacterium vitis S4] gi|221735166|gb|ACM36129.1| permease [Agrobacterium vitis S4] Length = 379 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 125/350 (35%), Gaps = 11/350 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +++ L P ++ + + + P+ + S V+ V Sbjct: 13 QVLFGIGTLAVVIAFLLTFSSILLPFVAGMALAYFLDPVADRLE-RLGLSRMMATVLILV 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +F++ L+ + + ++ + ++ + + + L W + +S Sbjct: 72 SFVVIFVLSLVIIIPVLVTQLNDFITNIPDY----VSQLQALIAKSNASWVPKWLNGQVS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + G FI S+ G LD ++ + F+ D + Sbjct: 128 TQMAAIKGNFSRYLAEGAGFIGTLLSQLWNSGKALLDIISLLVVTPVVAFYLLLDWDRMM 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +LDSL ++I+R + + I G + + G+ L G+ + +G Sbjct: 188 AKLDSLIPRNQVGAVREIAREMNRTIAGFVRGQGSLCLILGIYYAVGLSLIGLNFGLLIG 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 T +++ IP +++ + + ++ F+ L+P LVG Sbjct: 248 FFTGMISFIPYVGSSVGLVLALGMAAVQFWPDYLWVVITGVFFFTGQFLEGNVLQPKLVG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + F + G LG+ + A + V+ + ++ ++ Sbjct: 308 SSVGLHPVWLMFAMFAFGSLFGFLGVLVAVPCAAAVGVLVRFAVRRYLDS 357 >gi|323488328|ref|ZP_08093576.1| permease [Planococcus donghaensis MPA1U2] gi|323397986|gb|EGA90784.1| permease [Planococcus donghaensis MPA1U2] Length = 413 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 122/336 (36%), Gaps = 15/336 (4%) Query: 25 YFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + + F P++ A I+ + P+ + + + + V + Sbjct: 48 FVFQPFVAFFDVMGPPLIMAGILYYLLNPLINWME-----NKNISRIASISMVFVVVAGL 102 Query: 78 LLFLFYYGMLEMKE-LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + ++E L+S + + + S+L T+ + + L Sbjct: 103 LAWGIATLIPIIREQLMSLIDNWQDYLNTFISQIDHFFKNDLLSQLQTQLMGGTEPLSTS 162 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + S FG + L++I LF+ +DG + L Sbjct: 163 ITDQTENVVGSTVTGLGSVFG-VLSTTLLALITTPFILFYLLKDGHHFPYHIMKLLPSKM 221 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + R + I G ++A GL+ + L G+ + L ++ ++ +IP Sbjct: 222 REHSYLLLREMNLQISQYIRGQLLVAFFVGLMFWIGFSLVGLKYALTLSIMAGVLNLIPF 281 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+F + I ++ + + + IE + + +P ++G +++ + Sbjct: 282 LGSFIAFIPIVIIAIVVHSPIMLVKVLVVFFIEQTLEGRVFQPLILGSNLQIHPITIIAV 341 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G++G+ +G A+I VI+ + Sbjct: 342 LLTAGNLFGVVGVILGIPAYAVIKVIFSHLFSWYQR 377 >gi|257886316|ref|ZP_05665969.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257822172|gb|EEV49302.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 393 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 121/332 (36%), Gaps = 10/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P+L ALI+ + P+ S +I V ++ L + ++L + Sbjct: 50 IIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLGLGSVWLVPFL 107 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + K L+S + L + ++L P ++ + + + ++ Sbjct: 108 EEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIAGFIGNYWESG 167 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S +++ I FF R+ Q + ++ F +K ++ Sbjct: 168 -----AQRISNIFSTVTAIFITLFTGPIVAFFLLRNPQKFYQSVLAIVPPAFRTDFKNLT 222 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 +I + + S G I + G V + L G+ L + ++ +IP G I+F Sbjct: 223 KIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIPYIGPFIAFF 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + +W A++L D + P ++G +++ + L+ M Sbjct: 283 PGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVI-PRVMGDRLQIHPITILIVLLVMGDLM 341 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ G + L+ ++ K+ K Sbjct: 342 GIVGVIFGIPIYTLVKLLVTFIFRKFKQRYNK 373 >gi|310815332|ref|YP_003963296.1| Lipocalin-related protein and Bos/Can/Equ allergen [Ketogulonicigenium vulgare Y25] gi|308754067|gb|ADO41996.1| Lipocalin-related protein and Bos/Can/Equ allergen [Ketogulonicigenium vulgare Y25] Length = 363 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 122/340 (35%), Gaps = 10/340 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I L LY + G P + I + P+ + I ++ + LF + Sbjct: 22 AAIFLALLYTVSGVLLPFVLGAAIAYLLDPVADRMERW-GIGRVWAVSIISLVGVLLFTI 80 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL L + + +LV+ V + + W D S+ ++ + Sbjct: 81 GLLILVPTLINQALQLVNTVPSLVE---QLTNWARD--SFPELSDEQSQMRQTLNTTLTN 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ G + I M + + + + F+ D + + +D L Sbjct: 136 IGNAIQSRGGELIGGLVGS-AMSVVSIAMVLFIAPVVAFYLLLDWDRMVRHVDDLIPLPR 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A ++I + + + + G ++ + G+ LAG+ + +G +++ IP Sbjct: 195 RAEVRRIFAEIDQTLSAFIRGQGLVCVVLGVFYAVTLMLAGLNFGLVIGFGAGMISFIPY 254 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + +I L + G+ + + I F+ L P L+GG + L + Sbjct: 255 VGTLVGGVAAIGLALYQFWGDWLHVAIIVAIFLIGQFLEGNVLVPKLMGGSVGLHPVWLI 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F + G +G+ + + A+I V+ + + KE Sbjct: 315 FAISVFGALFGFVGMLVAVPVAAIIGVLIRFGLQKYKEGP 354 >gi|150377269|ref|YP_001313864.1| hypothetical protein Smed_5154 [Sinorhizobium medicae WSM419] gi|150031816|gb|ABR63931.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 663 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 120/345 (34%), Gaps = 16/345 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + LYF + F P+ A+++ F P+ S ++ +AV+ TV++ L Sbjct: 40 FVATAATVAVLYFARDVFLPLAIAILLTFALAPLVSKL--RRVGCPRSVAVVGTVTIAFL 97 Query: 74 FIVPLLFLFYYGMLEMKE--------LVSKVVLANQHGI--PVPRWLSDIPG--GMWASE 121 F+ + + E+ + +V KV + G + L + + S Sbjct: 98 FLFAFSGVVAMQVSEVAQNLPTYQYNIVEKVRSLKETGSESQILDRLGRVMERINIEISR 157 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + P++ ++ L + +++ + F + Sbjct: 158 PEPELRASPEAEPERKPVLVEIFSPQRPVETLKNIINPLLGPLATTGLVLVVVIFMLFER 217 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + + + + L ++ I G+ L L G+P+ Sbjct: 218 EDLRDRFIRLVGYGDLHRTTEALQDAGARVGRYLLMQLVVNITYGIPLAIGLSLLGIPNA 277 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPF 299 V G++ ++ +P P+ A+ ++L + ++ + + + + P+ Sbjct: 278 VLWGMLAILLRFVPYIGPVIAAALPLFLAFAAAPGWSLLIWTAALFIVLELLSNNVVEPW 337 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G L L + G +GL + L + V+ + Sbjct: 338 LYGSRTGLSPLAIIVSAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 382 >gi|328945816|gb|EGG39967.1| permease [Streptococcus sanguinis SK1087] Length = 360 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 124/342 (36%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV---IATVSVMCLFIV 76 I L L F+P++ ++ F ++ + +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRVPWKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G GL+G+ + A+I + +E ++ +E K Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|139436945|ref|ZP_01771105.1| Hypothetical protein COLAER_00078 [Collinsella aerofaciens ATCC 25986] gi|133776592|gb|EBA40412.1| Hypothetical protein COLAER_00078 [Collinsella aerofaciens ATCC 25986] Length = 469 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 118/334 (35%), Gaps = 4/334 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I +I + L + II F PI + + +++A + V+ + Sbjct: 29 IVIAAVIFNLMGILAPVIEFLAVGSIIAFVMSPITNWLEHH-GVNRGIGSLVALIVVVAV 87 Query: 74 FIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + L ++ E++S++ G + +S + ++L S Sbjct: 88 LVGVVCILSPILFGQIMEVLSRLPEQLRVAGGDLNEMISH--AKTLNNTPLKEYLDDNLS 145 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + + R I ++ ++ D + ++ ++ Sbjct: 146 SLVTVASKYVSQIAAELGRGVFPLITNTASQLFVIFLGLVLAYWMACDYPRMHHEICTII 205 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ + I+ + + GM + +I G + + + G P + + T IM Sbjct: 206 GQEKETSYRFMVAILSRSVGGYMRGMVVTSICGGFLAFIGFMIIGHPYAALMAIFTGIMH 265 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P P A++ L + A + I + D + P ++ +++ + + Sbjct: 266 LVPVVGPWVSAAIATVLGFMFSPMLALWTLIVTMIAQNVTDNVISPKVMQSSVQVHPIMS 325 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LV G MG +G+ I L A + I+ Sbjct: 326 LTALVIGSALMGPIGMIIAIPLCAALKGIFVYYF 359 >gi|256761322|ref|ZP_05501902.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256682573|gb|EEU22268.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 394 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 114/334 (34%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PVL +I+ + P+ K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVLFGIILFYLLNPMVKRLEKKIP--RVWAIAILYVLIIALLVLAGLQLFP 102 Query: 84 YGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + + + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYSFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ A+ L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GL+G+ G + L+ V K+ + Sbjct: 341 LLGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|315162842|gb|EFU06859.1| conserved hypothetical protein [Enterococcus faecalis TX0645] Length = 394 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 108/318 (33%), Gaps = 5/318 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A I+ + PI K+ + + + L + L++ + +++E Sbjct: 65 PVIMAGILYYLLNPIVDYLEKKQISRVW-----SIIGLFILIVALLIWGGIVIVPKIREQ 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V I S + + L + S + N F + Sbjct: 120 SVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQG 179 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F ++II M L + +DG +++ L K+ V + Sbjct: 180 IGNFFGAVATIFVAIITMPFILSYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVS 239 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ V LG+ + +IP +++L I Sbjct: 240 SYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 299 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + AIE + + + P ++G + + + L+ + G++G+ +G Sbjct: 300 SGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGI 359 Query: 333 VLMALIAVIWKESIMAIK 350 + A VI + Sbjct: 360 PVYAAAKVIITHIFEWYQ 377 >gi|302550444|ref|ZP_07302786.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468062|gb|EFL31155.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 441 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 117/348 (33%), Gaps = 22/348 (6%) Query: 8 PQGIMRWMIMFIILVSLYFL--------KGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M++ + LV+ + L G +L AL + P +++ Sbjct: 68 PRWLPRAMVLALALVAAFQLGSWAFHRLTGLLVGILIALFLALGIEPPVGRLVAR-GMRR 126 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A++ ++++ L + ++ ++V I W++ + Sbjct: 127 GLAALLVCLAMVLGATGFFLLFGSFLAGQISDIVEDFPGYFDSFI---GWINRTFHTELS 183 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L L+ + F L + ++ + + F+F Sbjct: 184 RADIQGRLLRSDWLRRYVQKS---------AGGVFDFSASVLGGLVRLLTIFLFSFYFAA 234 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L SL + + I ++A+ + L GVP Sbjct: 235 DGPRLRRALCSLLPPAKQSEVLRAWEIAVDKTSGYLYSRGLMALISAVAHFIMLALLGVP 294 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +AL V +++ IP AV I + + A + ++ I + + ++P Sbjct: 295 YALALAVWVGVVSQFIPVIGTYLAAAVPIVAAFAVDPWYAVVVLIFVVIYQQVENYLIQP 354 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + + F ++ G +G+ G I ++A + + + Sbjct: 355 KLTSKTVDIHPAVAFGSVIAGTALLGVAGTLIAIPVVATLQTFFSAYV 402 >gi|89053547|ref|YP_508998.1| hypothetical protein Jann_1056 [Jannaschia sp. CCS1] gi|88863096|gb|ABD53973.1| protein of unknown function UPF0118 [Jannaschia sp. CCS1] Length = 398 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 109/324 (33%), Gaps = 14/324 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L I + P+ + S + V ++ + +L + + + Sbjct: 64 IMPFLVGGAIAYFLDPVADRLE-RLGCSRAMATTLIFVIMIVAVVTIVLAIVPLLVQQAS 122 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV+ + PG LS+ +++ G + + Sbjct: 123 GLVAAAPGIFEQLRDFLT--ERFPGAFSDGSPVQTSLSNLGET-------IQSRGAELLQ 173 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S + ++ ++A F+ D + ++D L + ++ + + Sbjct: 174 TVLSSAAGVVNVIVFIVVVPVVA-FYMLLDWDRMIARIDQLLPRDHAPTIRMLAGRIDRT 232 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G A + G+ + +G+I ++ IP + ++I L Sbjct: 233 LASFVRGQGTVCLVLGTFYAVALMVVGLQFGLVVGLIAGLLTFIPYVGALVGGVLAIGLA 292 Query: 271 IK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + G + + + + L P LVG + L + F L G +G Sbjct: 293 LFQFWGEWWWIISVVAIFMVGQALEGNVLTPKLVGSSVGLHPVWLIFALSAFGTVFGFVG 352 Query: 328 LFIGPVLMALIAVIWKESIMAIKE 351 + +G + A+I V+ + + +E Sbjct: 353 MLVGVPVAAVIGVLVRYFVERYQE 376 >gi|288919568|ref|ZP_06413898.1| protein of unknown function UPF0118 [Frankia sp. EUN1f] gi|288349074|gb|EFC83321.1| protein of unknown function UPF0118 [Frankia sp. EUN1f] Length = 401 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 104/313 (33%), Gaps = 14/313 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ PV++ L+I P+ F + A A + + + + + Sbjct: 83 VRTVVIPVIAGLLIAALIHPLAQRF-QRLGLPRLGAAFAALIVFFLIVTGAGVAVGFNAA 141 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ + +V V +L+D P + ++ +S+ T+ Sbjct: 142 NEIPAVADQVSEGID---QVRDYLTDGPFHLSEGQIDDLVDDIRKSI---------TDNR 189 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + SI+ + + FFF DG I + + + R Sbjct: 190 GKLVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWDWIVTRFPAGAEDRVRGAGRE 249 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 I G +A + + + G P L ++T IP GA ++ A Sbjct: 250 AWNTITGYIRGTVFVAAVDAIGITIGLLAVGAPLVAPLALLTFFGGFIPIIGATVAGIAA 309 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L+ + +A + + L+P ++ ++L L L G G+ Sbjct: 310 VLVVLVSNGLGDALIILGVVIAVQQLEGHLLQPLIMRRAVRLHPLAIVIALSAGSVLAGI 369 Query: 326 LGLFIGPVLMALI 338 G +A++ Sbjct: 370 PGAIAAVPFVAVV 382 >gi|167036456|ref|YP_001664034.1| hypothetical protein Teth39_0025 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166855290|gb|ABY93698.1| protein of unknown function UPF0118 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 392 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 126/349 (36%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 44 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L ++ + + + ++ + Sbjct: 104 LASFILLLILIGVIGSLIAISITQLIYELSSL---AEISTNYANTINDIILNLVDRIRMY 160 Query: 121 EL-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + +++ + S + + + F ++ + ++A FF + Sbjct: 161 YISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 220 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 221 DKQLILDFIKRQIPSHWAQHAKSIQVNLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFD 280 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++ I+ +P G+ ++Y +I N L + + + +V + + P Sbjct: 281 YPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVV-VVRQIIEP 339 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + G + G LGL IGPV + + + + I+ Sbjct: 340 KIVGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKALQRAEII 388 >gi|50914110|ref|YP_060082.1| hypothetical protein M6_Spy0764 [Streptococcus pyogenes MGAS10394] gi|50903184|gb|AAT86899.1| Hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10394] Length = 393 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFVLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|319745230|gb|EFV97549.1| membrane protein [Streptococcus agalactiae ATCC 13813] Length = 396 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 130/360 (36%), Gaps = 18/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYS---SF 51 +LN Q ++ MI F++ ++++ + F A ++ L+I + + +F Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL 110 + K+ + ++ L I + +++ + + N+ + ++ Sbjct: 78 LEKRGIKRVTAILAVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSFI 137 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + LS+ S + N +D+ AS + ++ I Sbjct: 138 DHNPWLKSYKGEISSILSNISSQAVSYAEKFSKNVLDWAGNLASTVARVT----VATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD + + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRKMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 >gi|126725674|ref|ZP_01741516.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacterales bacterium HTCC2150] gi|126704878|gb|EBA03969.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacterales bacterium HTCC2150] Length = 357 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 132/354 (37%), Gaps = 15/354 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ + Q W I+ +++ L+ L P L I + PI + S Sbjct: 1 MKMGLPVQQQAKYWGIVVAVILGILWVLGDVIMPFLLGGAIAYCLDPIADRLE-RMGLSR 59 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T + T+ + +FIV L + + + LV A P M A Sbjct: 60 TIATTLITLLAILVFIVMALLVVPTLVRQSVALVEFAPQAFSDLQKFLT--EKFPSLMDA 117 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L ++ G D + + + L+ + ++ + + F+ Sbjct: 118 ESTLRQSLQSLGET-------IRAKGGDLLNGLVTS-AVSLLNILVLVVIVPVVAFYLLL 169 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++ ++D L ++++R + + + S G + +G +A LAG+ Sbjct: 170 DWDNMVAKIDDLMPREHRDVIRQLAREIDRTLASFIRGQGTVCAIQGAYYAAALMLAGLQ 229 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTL 296 + +G + +++ IP + ++I L + GN + + A+ F+ L Sbjct: 230 FGLVVGFVAGLISFIPYIGALFGGVLAIGLALFQFWGNWLMIGIVVVIFAVGQFVEGNIL 289 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P LVG + L + F L G +GL + L A + VI + +I+ K Sbjct: 290 TPKLVGESVGLHPVWLLFALSVFGLLFGFVGLLVAVPLAASLGVIIRFAIVQYK 343 >gi|229019819|ref|ZP_04176621.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1273] gi|229026045|ref|ZP_04182428.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1272] gi|228735261|gb|EEL85873.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1272] gi|228741490|gb|EEL91688.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1273] Length = 365 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 128/351 (36%), Gaps = 16/351 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+R + + + V+ +++ + + ++ II F + + ++ + F +A + Sbjct: 2 ILRLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVS 61 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L ++ L Y + E + ++ P + L+ +S Sbjct: 62 LILVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKF 121 Query: 131 QSLKILSETFLKTNGIDF--------------IPRFASRFGMIFLDYCLSIIFMIIALFF 176 L + N + I + F ++F+++A FF Sbjct: 122 NHLGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFF 181 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ ++ + Y K I + K + + +++ + Sbjct: 182 ISYDWHHLAHKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLIL 241 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + + +IT ++ ++P G F IY+ G+ A L + + + + + Sbjct: 242 RVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQI 300 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 301 MEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKAHV 351 >gi|77457862|ref|YP_347367.1| hypothetical protein Pfl01_1635 [Pseudomonas fluorescens Pf0-1] gi|77381865|gb|ABA73378.1| putative transmembrane protein [Pseudomonas fluorescens Pf0-1] Length = 357 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 124/343 (36%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ ++ L P L AL++ + P+ + S T+ + + Sbjct: 13 VLLLCAFVWLLHPILTPFLVALLLAYLFDPLVDRLE-RLGLSRTWGVITVFALFTLIVTA 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 LL L ++ L + WL +P L + Sbjct: 72 LLLVLVPMLAKQLLRLYELA-------PQMLDWLQHTAVPWAQSKLGLSDGFWKFDKVKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE +T + + + A+ + + + +++ + + F+ RD + ++ L Sbjct: 125 AISEHMGQTTDIVGVVLSQATASSLALIGWLANLVLIPVVSFYLLRDWDVMMARIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + + G+ + +G+I + A+ Sbjct: 185 RDREERVVALAGECHEVLGAFVRGQLLVMLALGVIYAAGLMIVGLELGLLIGLIAGLAAI 244 Query: 254 IPGGAPISFTAVSIY---LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + ++ G+++ + + + L P LVG I L + Sbjct: 245 VPYMGFVIGIGAALIAGLFQFGGDLYPMIGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGVLLALPVAAVIMVLVRHVHDLYKDSE 347 >gi|71903383|ref|YP_280186.1| hypothetical protein M28_Spy0718 [Streptococcus pyogenes MGAS6180] gi|71802478|gb|AAX71831.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS6180] Length = 393 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|309777687|ref|ZP_07672637.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914591|gb|EFP60381.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53] Length = 395 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 108/337 (32%), Gaps = 4/337 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPL 78 I + + L+ F ++ A + AV + + + + + Sbjct: 41 ITMVIGMLRPFIYGIMMAFVFNIPMKFFLKKLPDSLGRWKKALAAVCSFLIIFGILAFII 100 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + L + + + + ++ + + + + + + Sbjct: 101 RIVMPQVIDSIASLANSLPGYIE---DAQKTITAMIEKQQIPDEVLRQVDTYSAQLQDTL 157 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L NGI + AS F + ++++ + + + L + Sbjct: 158 VNLLKNGIPHLLTMASGFASSLANVFMALVIAVYLTVSKDKLLEQSHRFLYAFTSQRVNH 217 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++R+ + G + A+ G++ + G P LGVI +IP Sbjct: 218 NVLRVARLTNTTFSAFITGQLVEAVIIGVLCYIGCLVLGFPYAPILGVIIGCTNIIPIFG 277 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + L+ N ++G + P +VG + L L F + Sbjct: 278 AIFGVVLCALLVAFVNPLQGVFFVIFGICLQQFESNLIYPRVVGTSVGLSGLWVLFAITV 337 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G G G+ +G ++I + +E + K++ Sbjct: 338 GGGLFGFAGMLLGLPTFSVIYSLLREEMNRRVRMKQE 374 >gi|282876206|ref|ZP_06285073.1| putative membrane protein [Staphylococcus epidermidis SK135] gi|281295231|gb|EFA87758.1| putative membrane protein [Staphylococcus epidermidis SK135] Length = 368 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 132/359 (36%), Gaps = 18/359 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F AP++ +L++ + PI + + Sbjct: 2 VLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYRIPR----- 56 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + +++ + + L + + S++ ++ ++ + + + Sbjct: 57 ---LLGITIIYVAIIGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNNNTIL 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ ++ + + D+ + F + + I LFF +D Sbjct: 114 SGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFMLKD 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + F + + + + S G I++ GL+L Y + G+ Sbjct: 174 GHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGLKY 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L I A+ +++P P + +I + I + L + + F + P + Sbjct: 234 ALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISPNV 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G +K+ L F L+ MG++G+ IG L A++ V+ M K + N Sbjct: 294 MGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRRYNRYYGN 352 >gi|257080067|ref|ZP_05574428.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256988097|gb|EEU75399.1| conserved hypothetical protein [Enterococcus faecalis JH1] Length = 394 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 113/334 (33%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 PVL +I+ + + K + I V ++ L ++ L LF Sbjct: 45 FVIFSAVLGPVLFGIILFYLLNSMVKRLEKKIP--RVWAIAILYVLIIALLVLAGLQLFP 102 Query: 84 YGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +EL+ + + + V +++ P L + F Sbjct: 103 IIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAG 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + L++ I FF +D + + + F + + Sbjct: 163 -DYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDE 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 S+I I G I ++ G++ A+ L G+ L + I+ +IP G I+ Sbjct: 222 YSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIPYIGPFIA 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F I + +W AI+L D + P ++G +K+ + L+ Sbjct: 282 FIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVI-PRVMGDKLKVHPITILLVLLVMGE 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL+G+ G + L+ V K+ + Sbjct: 341 LFGLMGVIFGIPMYCLVKVTVIYLFRKFKQRYNR 374 >gi|15675014|ref|NP_269188.1| hypothetical protein SPy_1011 [Streptococcus pyogenes M1 GAS] gi|21910186|ref|NP_664454.1| hypothetical protein SpyM3_0650 [Streptococcus pyogenes MGAS315] gi|28896114|ref|NP_802464.1| hypothetical protein SPs1202 [Streptococcus pyogenes SSI-1] gi|71910551|ref|YP_282101.1| hypothetical protein M5005_Spy_0738 [Streptococcus pyogenes MGAS5005] gi|94988484|ref|YP_596585.1| hypothetical protein MGAS9429_Spy0853 [Streptococcus pyogenes MGAS9429] gi|94990364|ref|YP_598464.1| hypothetical protein MGAS10270_Spy0855 [Streptococcus pyogenes MGAS10270] gi|94992310|ref|YP_600409.1| hypothetical protein MGAS2096_Spy0813 [Streptococcus pyogenes MGAS2096] gi|139473855|ref|YP_001128571.1| hypothetical protein SpyM51019 [Streptococcus pyogenes str. Manfredo] gi|13622163|gb|AAK33909.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|21904379|gb|AAM79257.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811364|dbj|BAC64297.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71853333|gb|AAZ51356.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS5005] gi|94541992|gb|ABF32041.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS9429] gi|94543872|gb|ABF33920.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10270] gi|94545818|gb|ABF35865.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS2096] gi|134272102|emb|CAM30346.1| putative membrane protein [Streptococcus pyogenes str. Manfredo] Length = 393 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|290580177|ref|YP_003484569.1| hypothetical protein SmuNN2025_0651 [Streptococcus mutans NN2025] gi|254997076|dbj|BAH87677.1| putative membrane protein [Streptococcus mutans NN2025] Length = 389 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 119/327 (36%), Gaps = 9/327 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL P++ + ++ + PI + V+A V + L++ Sbjct: 52 FLAVIMLPLVISALLYYLLKPIVDFIERRGTSR-----VMAITIVFVIIAGLLVWGIANF 106 Query: 86 MLEMKE-LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E L S + + V +S + + + + + + +T Sbjct: 107 FPMLNEQLTSFIKYLPSYVRSVDAQVSKLLRNDLLASFRPQIEDAVTNFSQKAVDYAETF 166 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + +A F + ++II +F+ RD + + S +I Sbjct: 167 SKGAV-TWAGNFASLIARVTVAIIISPFIVFYLLRDSSKMQEAFVSYLPTKMRQPIHRIL 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 V + + G +AI G + + + G+ V G+I + MIP G+ ++ Sbjct: 226 GDVNRQLAGYVQGQVTVAIIVGFMFSIMFTIIGLRYAVTFGIIAGFLNMIPYLGSFLATI 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V I L++G + L +E I + + P ++G + + + F L+ Sbjct: 286 PVFILALVEG-PVMVVKVALVFIVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTAGSMF 344 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+F+G + A I V+ KE K Sbjct: 345 GVWGVFLGIPVYASIKVVVKEIFEWYK 371 >gi|229163588|ref|ZP_04291537.1| Sporulation integral membrane protein YtvI [Bacillus cereus R309803] gi|228619838|gb|EEK76715.1| Sporulation integral membrane protein YtvI [Bacillus cereus R309803] Length = 365 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +V Y L G P + A + P+ + K + +++ + V Sbjct: 6 IFVIVATVVGFYALLYTSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILV 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + + +L +K Sbjct: 66 FGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLG 125 Query: 131 QSLKILSETFLKTNGID----------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + ++ G + I + F ++F+++A FF D Sbjct: 126 EPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYD 185 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q+ L + Y K I + K + + +++ + VP Sbjct: 186 WHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT ++ ++P G F IY+ G+ A L + + + + + + P Sbjct: 246 AITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIMEPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 305 VLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKAHV 351 >gi|304407564|ref|ZP_07389216.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304343515|gb|EFM09357.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 356 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 122/330 (36%), Gaps = 12/330 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 FL+ AP A+II + P+ S +K TV+V+ ++ V L Sbjct: 37 YAFLRAVLAPFFIAMIISYVLNPVVSLLHVRKMPR--------TVAVLLIYTVFCGSLTV 88 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M + + ++ N+H + ++ + + L + + + + ++ Sbjct: 89 VLMNAVPMFMEQLQELNRHAPELTVRAQNLVENLNNNSLMPESIRSGINNSLYK---MEK 145 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + F + G ++ + + F+ +D + + + ++ Sbjct: 146 KLSESVFDFVNNIGA-MVNVVFILFIIPFLAFYILKDFEVFERTVITYVPKSHRQQTVRL 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + + S G I+ + G++ YW+ G+P + L + AI +IP P Sbjct: 205 LKDIDAALGSYIRGQFIVCLIVGVLAYLGYWIIGMPYPLLLAAVVAITNVIPYLGPFIGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 A ++ + ++ + + + + + P +VG + + L L+ G Sbjct: 265 APALLMAATISVKMMILVVVVNTLCQILESNVVSPQVVGRTLHMHPLSIILALLVGGELA 324 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + + A + V+ + K Sbjct: 325 GIVGMILAVPIFAALKVVVQHMFAYYVRRK 354 >gi|325689380|gb|EGD31385.1| permease [Streptococcus sanguinis SK115] Length = 360 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 123/342 (35%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + + Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVM 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G GL+G+ + A+I + +E ++ +E K Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|269962255|ref|ZP_06176608.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833086|gb|EEZ87192.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 338 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 87/244 (35%), Gaps = 5/244 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I FI++V + F +L AL++ +PI +K + +S A + ++ + L Sbjct: 62 VIAFIVIVCCWAFLPFLPILLWALVLAIALYPIKQYLQAKTKWTSARTATLIALAGVLLL 121 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSL 133 P + + + + D P G ++W + + S Sbjct: 122 GGPTAMVGNSFATKTFDAYEAYQEGTLVVSKPSETVQDWPVIGEELYDVWNEASENLPSF 181 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +KT +I AS +II I L + SI + S Sbjct: 182 VEKRQPQIKT-LFSWIGDKASGAAKSVFLLIGAIIIAGIMLAWSQPATHSIQKIFISFSG 240 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A ++ + IR +G+ IA + G+ L+GVP+ +I + A+ Sbjct: 241 K---ARGPELHALTTATIRQVAIGIIGIAFLTAMTFGATVALSGVPAAALFTLIALVFAI 297 Query: 254 IPGG 257 + Sbjct: 298 VQLP 301 >gi|94994287|ref|YP_602385.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] gi|306827469|ref|ZP_07460753.1| membrane protein [Streptococcus pyogenes ATCC 10782] gi|94547795|gb|ABF37841.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] gi|304430349|gb|EFM33374.1| membrane protein [Streptococcus pyogenes ATCC 10782] Length = 393 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|218290422|ref|ZP_03494552.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius LAA1] gi|218239550|gb|EED06744.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius LAA1] Length = 375 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 116/328 (35%), Gaps = 5/328 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++L L + P + + P+ + T + ++ V Sbjct: 19 EIVILLAFIAAFILALACLMQYILPFVIGWVFAILLIPVVRWLERRGMARLTSVLLVLGV 78 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 SV+C+ + + + E VS + + + +I +S Sbjct: 79 SVLCIVAI-SAGIIIGALREATSFVSHSQVFFRVQLAQIE--GEIESSESLYGQLPPQVS 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + I D + ++ FF + + + Sbjct: 136 NAVQSALTQFAHGLEGSVHKIITGLIGIVTHLPDTLFIAVISVVTAFFILQRRERMLARF 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + T I+ + ++ G P + LG++ Sbjct: 196 YRMMPPGWAPKLNAVFEDMERAFLGTIRVQFILMCLSMFLGMIGMFVLGFPYAILLGILF 255 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + ++P G+ I +I LI G++ A + + + I+ T+ P ++ + L Sbjct: 256 GLAGLVPIVGSAILTVPWAIVALITGHVAVAIKVLAL-QVVISIIRHTVEPKILADSVGL 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L T FGL G + MG +GLFIGP+L+ Sbjct: 315 DTLTTLFGLYVGFKVMGFIGLFIGPILL 342 >gi|315646978|ref|ZP_07900092.1| hypothetical protein PVOR_16529 [Paenibacillus vortex V453] gi|315277630|gb|EFU40955.1| hypothetical protein PVOR_16529 [Paenibacillus vortex V453] Length = 383 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ +K P++ + I+ + P+ + K+ + +I +++ + Sbjct: 40 ISFVLHPLAVLIKTIVLPIILSGILYYLLNPLVD-IMEKRNIKRGWSILILYLAIAGILT 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V +L + ++ L+ +++ V ++ G S+L + Q Sbjct: 99 VVVLAVIPVLRNQITGLIDNFPRYSEN---VRLQFEELTGSQLFSQLQDAVSINSQDWWN 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 R G + LSI+ + LF+ +DG + Q++ S Sbjct: 156 TLTQKATEIFNHTWARVGGFLGAFT-EIVLSIVTVPFVLFYMLKDGKKLPQKILSFLPTK 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + I S G I++ G++L Y + G+ + L +I + +++P Sbjct: 215 SRSGIFHVLQDINHQISSFIRGQIIVSFCIGILLYIGYMIIGLDYALILAIIASFTSIVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + + + + I I K + P ++G +K+ + F Sbjct: 275 YLGPAIAITPALIVALVTSPVMLLKMVAVWTIVQLIEGKFISPQIMGKTLKIHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G++G+ + A++ V K+ Sbjct: 335 ILTSGNLFGVVGILLAVPGYAVLKVCATHIFKWFKDT 371 >gi|254827854|ref|ZP_05232541.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284801239|ref|YP_003413104.1| hypothetical protein LM5578_0989 [Listeria monocytogenes 08-5578] gi|284994381|ref|YP_003416149.1| hypothetical protein LM5923_0943 [Listeria monocytogenes 08-5923] gi|258600235|gb|EEW13560.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284056801|gb|ADB67742.1| hypothetical protein LM5578_0989 [Listeria monocytogenes 08-5578] gi|284059848|gb|ADB70787.1| hypothetical protein LM5923_0943 [Listeria monocytogenes 08-5923] Length = 378 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGL---SNNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 130 LKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|254832124|ref|ZP_05236779.1| hypothetical protein Lmon1_12289 [Listeria monocytogenes 10403S] Length = 378 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGL---SNNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 130 LKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|322382966|ref|ZP_08056798.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153086|gb|EFX45544.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 365 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 119/319 (37%), Gaps = 12/319 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FLK AP + A+II + P+ + +K + V+V+ +++V L+ Sbjct: 48 FLKAVLAPFIIAVIISYILNPVVNLLNGRKVPRA--------VAVLMIYLVFFTSLWVVI 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 M V ++ N+H + + G+ L + + L+ Sbjct: 100 MNVTPVFVKQLGELNEHMPQLTMRAESLMQGLSDHPLLPPSVRAGIQDALFK---LQHII 156 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + G ++ I F+ +D + + + ++ + K+ Sbjct: 157 SERITKSVESIGSTINMLFIAFII-PFLAFYMLKDFQLMEKAVLAIVPRSHRKHIIKVLV 215 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++ G++ YW+ G+P + L + AI +IP P A Sbjct: 216 DIDTALGNYIRGQLLVCFIIGILAYIGYWVIGMPYALLLATVVAIFNIIPYLGPFFGAAP 275 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I + + P +VG + + L F L+ G G+ Sbjct: 276 ALVVAATVSFKMVLLVAVINLIVQILEGNFISPQVVGRTLHMHPLLIIFALLVGGEAAGI 335 Query: 326 LGLFIGPVLMALIAVIWKE 344 +GL + + A+ VI + Sbjct: 336 VGLILAVPVFAVFKVILQH 354 >gi|16802949|ref|NP_464434.1| hypothetical protein lmo0908 [Listeria monocytogenes EGD-e] gi|224499448|ref|ZP_03667797.1| hypothetical protein LmonF1_06997 [Listeria monocytogenes Finland 1988] gi|224503122|ref|ZP_03671429.1| hypothetical protein LmonFR_11478 [Listeria monocytogenes FSL R2-561] gi|16410311|emb|CAC98986.1| lmo0908 [Listeria monocytogenes EGD-e] Length = 378 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGL---SNNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 130 LKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|84686212|ref|ZP_01014107.1| Lipocalin-related protein and Bos/Can/Equ allergen [Maritimibacter alkaliphilus HTCC2654] gi|84665739|gb|EAQ12214.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacterales bacterium HTCC2654] Length = 362 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 115/343 (33%), Gaps = 14/343 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + V L+FL P L I + P+ + + + ++ + + Sbjct: 13 AIAAVVFFVLLWFLGDVIMPFLIGGAIAYFLDPVADKLEAW-GFKRIWATITISILALIV 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++ +L + + + +L++ Q+ + P + + + L Sbjct: 72 FVILILLIVPSLVNQAGQLINLAPQIAQNLRDFL--IERFPDVVDQDSVLRQSLDQIGKT 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L M ++ L + + + F+ D + +D L Sbjct: 130 IQDRGAEL--------VDAVLSSAMGIVNIALLFVIVPVVTFYLLWDWDRMVAAIDDLLP 181 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ + + + G + + G A LAG+ + +G + + Sbjct: 182 RDHAPVIRDLASQIDRTLAGFIRGQGTVCLILGTFYAVALMLAGLQFGLIVGAVAGALTF 241 Query: 254 IPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + A++I L + G ++ + + F L P LVG + L + Sbjct: 242 IPYIGALVGGALAIGLALFQFWGEWWHIAIVAGIFMVGQFFEGNILTPNLVGTSVGLHPV 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A + V+ + I KE + Sbjct: 302 WLIFALSAFGTVFGFVGMLVAVPVAAALGVVTRYLIQRYKEGR 344 >gi|223932565|ref|ZP_03624566.1| protein of unknown function UPF0118 [Streptococcus suis 89/1591] gi|302024193|ref|ZP_07249404.1| membrane protein [Streptococcus suis 05HAS68] gi|330833141|ref|YP_004401966.1| hypothetical protein SSUST3_1355 [Streptococcus suis ST3] gi|223898836|gb|EEF65196.1| protein of unknown function UPF0118 [Streptococcus suis 89/1591] gi|329307364|gb|AEB81780.1| protein of unknown function UPF0118 [Streptococcus suis ST3] Length = 388 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 123/329 (37%), Gaps = 13/329 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL+ P++ ++ + P+ K TV + LF++ L + + Sbjct: 52 FLEIVLLPMILTGLLYYLLNPMVDWMEKHKISR--------TVGISILFVLISLLIIWGL 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + +V Q+ + + G+ + + + + + Sbjct: 104 AVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIVAYA 163 Query: 146 IDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F +AS ++I+ M LF+ RDG +++ + + Sbjct: 164 QKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKWREPIGT 223 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + V + + G +AI L+ + + G+ + LGV+ + +IP G+ ++ Sbjct: 224 VLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIPYLGSFLA 283 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I LI G I + + IE I + + P ++G + + + F L+ + Sbjct: 284 MIPAVILGLIAGPIML-IKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFVLLTAGQ 342 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ +G + A I V+ K + K Sbjct: 343 MYGVLGVLLGIPIYASIKVLVKAAFEWYK 371 >gi|292558783|gb|ADE31784.1| Predicted permease [Streptococcus suis GZ1] Length = 391 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 122/329 (37%), Gaps = 13/329 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL+ P++ ++ + P+ K TV + LF++ L + + Sbjct: 55 FLEIVLLPMILTGLLYYLLNPMVDWMEKHKISR--------TVGISILFVLISLLIIWGL 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + +V Q+ + + G+ + + + + + Sbjct: 107 AVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIVAYA 166 Query: 146 IDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F +AS ++I+ M LF+ RDG +++ + + Sbjct: 167 QKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKWREPIGT 226 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + V + + G +AI L+ + + G+ + LGV+ + +IP G+ ++ Sbjct: 227 VLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIPYLGSFLA 286 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I LI G I + + IE I + + P ++G + + + F L+ + Sbjct: 287 MIPAVILGLIAGPIML-IKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFVLLTAGQ 345 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+ +G + A I V+ K + K Sbjct: 346 MYGVPGVLLGIPIYASIKVLVKAAFEWYK 374 >gi|237752007|ref|ZP_04582487.1| membrane protein [Helicobacter winghamensis ATCC BAA-430] gi|229376574|gb|EEO26665.1| membrane protein [Helicobacter winghamensis ATCC BAA-430] Length = 355 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 134/361 (37%), Gaps = 18/361 (4%) Query: 6 LNPQGIMRWMIMFII--LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + GI ++I F++ L F +L A ++ + IY + + + + S ++ Sbjct: 1 MRNSGIYFFLIAFVLTLLALFRLYAPFLMNLLIAFLLFIATQGIYCALLKRLK-SQLLVS 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + ++ L VP+ ++ L + + L+ + L Sbjct: 60 ALMVLILITLCFVPIFYILLSLANIATNL--DLGNFQNFLLDTQARLT-LFSKDLILYLP 116 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + ++ + + +F+++ LFFFY G + Sbjct: 117 DIIQNEMNTYLEQFHAINWGDILKQGLNLIAKASKNSISFVSDTLFILVFLFFFYYYGNT 176 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L P K + V VI F I +G + G G + Sbjct: 177 LGSYFLGLIP-FNPTQTKSLYNEVSAVISVVFYSSIFSMILQGTLFGILMLFFGY-NSYL 234 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP--- 298 L V +++P G + + + Y L GN NA + L+ I + + D ++P Sbjct: 235 LAVFYGFASLVPVVGGSLVWLPIVGYELYLGNYTNAIVIALYSIIIIATLADNGIKPFII 294 Query: 299 -----FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ P+++ + FF ++ G+ + G G+ +GP + AL + + + NK Sbjct: 295 AFINRVLIKTPVQINEMLIFFAIIAGLTSFGFWGIVLGPAITALFIALLRIYQTLLNSNK 354 Query: 354 E 354 + Sbjct: 355 D 355 >gi|219669593|ref|YP_002460028.1| hypothetical protein Dhaf_3575 [Desulfitobacterium hafniense DCB-2] gi|219539853|gb|ACL21592.1| protein of unknown function UPF0118 [Desulfitobacterium hafniense DCB-2] Length = 344 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 119/327 (36%), Gaps = 9/327 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +P + A ++ + P+ + + + +S+ +F+ LL L Sbjct: 25 VRPILSPFMLAFVLAYLLAPVVEALVRRGVGRK--------ISIALVFVGILLSLALLIF 76 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + +L ++ +Q R L + A+ T S+ + ++ I Sbjct: 77 IVIPKLYIELSKLSQVLPETVRTLELVIQDFRANFRATGLPHQVVSVLDEHLSEGESFLI 136 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 ++ F L I + + D + L W+++ + Sbjct: 137 HWLEEFLDNLPKALTSMSL-FILSPVIAIYLLADWQRLQAGFLRLVPQRKRVAWQRVVQD 195 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++RS G I+A+ G++ G L G+ + +GVI + +IP P+ S Sbjct: 196 ISHIVRSFIRGNVIVALIVGILTGVGVKLVGMDYALLIGVICGVFDLIPYFGPLIGAVPS 255 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L + + A + + I + + P L+G + L L F L+ G G Sbjct: 256 VLLGLIQSPMMALKVAIVILIVQQLESSIISPKLMGDSVGLHPLWIIFALLAGGEIAGFW 315 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENK 353 G+ A++ VI + + + Sbjct: 316 GMLFAVPFAAVLRVIIRHIYFWLVSPE 342 >gi|253752195|ref|YP_003025336.1| hypothetical protein SSUSC84_1344 [Streptococcus suis SC84] gi|253754021|ref|YP_003027162.1| membrane protein [Streptococcus suis P1/7] gi|253755955|ref|YP_003029095.1| membrane protein [Streptococcus suis BM407] gi|251816484|emb|CAZ52120.1| putative membrane protein [Streptococcus suis SC84] gi|251818419|emb|CAZ56248.1| putative membrane protein [Streptococcus suis BM407] gi|251820267|emb|CAR46734.1| putative membrane protein [Streptococcus suis P1/7] gi|319758582|gb|ADV70524.1| hypothetical protein SSUJS14_1464 [Streptococcus suis JS14] Length = 388 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 123/329 (37%), Gaps = 13/329 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL+ P++ ++ + P+ K TV + LF++ L + + Sbjct: 52 FLEIVLLPMILTGLLYYLLNPMVDWMEKHKISR--------TVGISILFVLISLLIIWGL 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + +V Q+ + + G+ + + + + + Sbjct: 104 AVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIVAYA 163 Query: 146 IDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F +AS ++I+ M LF+ RDG +++ + + Sbjct: 164 QKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKWREPIGT 223 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + V + + G +AI L+ + + G+ + LGV+ + +IP G+ ++ Sbjct: 224 VLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIPYLGSFLA 283 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I LI G I + + IE I + + P ++G + + + F L+ + Sbjct: 284 MIPAVILGLIAGPIML-IKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFVLLTAGQ 342 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ +G + A I V+ K + K Sbjct: 343 MYGVLGVLLGIPIYASIKVLVKAAFEWYK 371 >gi|313901320|ref|ZP_07834807.1| putative membrane protein [Clostridium sp. HGF2] gi|312953928|gb|EFR35609.1| putative membrane protein [Clostridium sp. HGF2] Length = 394 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 110/333 (33%), Gaps = 2/333 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F ++ A + LA + ++ ++ + ++ + Sbjct: 47 MLRPFIYGIMMAFVFNIPMKFFLKKLPDNLGRWKKALAAVCSLLIIFGILAFIVRIVMPQ 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++E ++ + + ++ + + K + + + L NG Sbjct: 107 VIESIASLANSLPGYIE--DAQKTITSMIEKQQIPQDVLKQVDTYSAQLQDTLVNLLKNG 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + AS F + ++++ + + + L + A+ +++ Sbjct: 165 IPHLLTMASGFASSLANVFMALVIAVYLTVSKDKLLEQSHRFLYAFTSSRANAFVLRVAH 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G + A+ G++ + G P LGVI +IP I + Sbjct: 225 LTNTTFSAFITGQLVEAVIIGVLCYIGCLVLGFPYAPILGVIIGCTNIIPIFGAIFGVVL 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L+ N ++G + P +VG + L L F + G G Sbjct: 285 CALLVAFVNPLQGVFFVIFGICLQQFESNLIYPRVVGTSVGLSGLWVLFAITVGGGLFGF 344 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+ +G ++I + +E + K + SS Sbjct: 345 AGMLLGLPTFSVIYSLLREEMNRRVRLKRENSS 377 >gi|322385122|ref|ZP_08058769.1| membrane protein [Streptococcus cristatus ATCC 51100] gi|321270746|gb|EFX53659.1| membrane protein [Streptococcus cristatus ATCC 51100] Length = 410 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 120/339 (35%), Gaps = 11/339 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F+ PV+ A ++ + PI +K + +F+ Sbjct: 63 ISFIFTPVIEFIGVIMLPVILAGLLYYLLNPIVDWMEKRKINR--------VAGITIVFV 114 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + + + L +VV +++ + + + + + + + + Sbjct: 115 LIGVLIVWGLAVAIPNLQHQVVSFSKNVPAYLKQANKMIDDVLTNHISDDLKPQIEQVTN 174 Query: 136 LSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T + + +F +AS ++II M LF+ RDG ++ + Sbjct: 175 KLSTQITSWASNFSSKAVNWASNLISTASQIIVAIIIMPFILFYLLRDGKNLKGYVVQFL 234 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F + ++ V + + G +AI + + + G+ V L V+ ++ Sbjct: 235 PTKFRESFGQVMTDVNTQLANYVRGQVTVAIIVAFMFMILFKIIGLRYGVTLAVVAGVLN 294 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P ++ L + + + +E I + + P ++G + + + Sbjct: 295 LVPYLGSFLAMLPALVLGLIAGPIMLLKVIIVFIVEQTIEGRFVSPLILGSQLSIHPITI 354 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F L+ G+ G+ +G A V K+ Sbjct: 355 LFVLLTSGTMFGIWGVLLGIPAYASAKVAITALFKWYKK 393 >gi|116871971|ref|YP_848752.1| hypothetical protein lwe0551 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740849|emb|CAK19969.1| putative membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 389 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 137/364 (37%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFL--------------KGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y L K AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 KK + + + + ++ L I+ F+ ++ L + Sbjct: 69 IDWLEKKKWKR-GWAIALLYIVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWD---QIT 124 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + ++ +L K ++ + T + I + G + + L+I Sbjct: 125 QRFNEFSRSSLFDQLKDKLSTNMSDIMKTISTKGTSVVNSAISSIGNIVGTVT-EVVLAI 183 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + LF+ +DG + L + A+ +++ I S G I+++ G+ Sbjct: 184 VTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|310643516|ref|YP_003948274.1| protein [Paenibacillus polymyxa SC2] gi|309248466|gb|ADO58033.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 355 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 125/351 (35%), Gaps = 24/351 (6%) Query: 14 WMIMFIILVSLYFLKG-----------FFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +IL ++ L+ AP A+II + P+ S +K S Sbjct: 16 TLLGLVILYFIWLLRPLFLHLYEFLKTIIAPFAVAMIISYVLNPVVSMLGGRKVPRS--- 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+V+ ++ V L L M + + ++ N+H + + M + L Sbjct: 73 -----VAVLLIYAVFLASLIVILMNLIPMFIEQLDELNEHLPELTMHAQGLMTNMDSGIL 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + E + T F+ + ++ + +F+ +D Sbjct: 128 PQGVRTGMNQWFFQLENRMATGISTFMDNIGGMI-----NMLFNVFIVPFLIFYILKDFD 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + S + + + + + + G ++ + G++ Y L G+P + Sbjct: 183 VFERTIVSYLPRSRRKAIVSVLKEIDQALGNYVRGQLLVCVIIGVMAYIGYMLIGMPYAL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + A+ ++P P A ++ + ++ + + A + + P +VG Sbjct: 243 LLAGVVALFNIVPYLGPFLGAAPAVIMASTVSLKMVLLVVVVNACIQVLESNVISPQVVG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L L F L+ G G+ GL + +MA++ V + + K Sbjct: 303 RTLHLHPLAIIFALLVGGEIAGIAGLILAVPVMAVLKVGLQHFFAYYVKRK 353 >gi|163759172|ref|ZP_02166258.1| permease [Hoeflea phototrophica DFL-43] gi|162283576|gb|EDQ33861.1| permease [Hoeflea phototrophica DFL-43] Length = 386 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 121/346 (34%), Gaps = 10/346 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + L Q + + + + L + P ++ + + + P+ F + S Sbjct: 5 IDQRALRRQIFFWLLALGLFIAFLMVFRSILLPFIAGMALAYFLDPVADWFERR-GLSRL 63 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + LF + L+ + + + +L ++ + + I ++ Sbjct: 64 MATIVILCAFVALFAISLVVIIPVLVTQAADLGGRIPGYITQLQELLSSETTIMPAWFSD 123 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L S LK I I + GM LD + + F+ D Sbjct: 124 QLSQVKESFAALLKE------GAGLIGTIFQQIWNSGMALLDIAALFVVTPVVAFYLLLD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++D + ++R + + I G + + GL+ + G+ Sbjct: 178 WDRMIERVDGWIPRDHVETVRDLARQINQAIAGFVRGQGSVCLILGLIYAVGLSIVGLNF 237 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL---FIVDKTLR 297 + +G+ I++ IP + +++ + I + + + + F L+ Sbjct: 238 GLLIGLFAGIISFIPYVGSMVGLVLALVVAIVQFWPDFIMIGAVIGVFVVGQFFEGNILQ 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P LVG + L + F L G +G+ I A + V+ + Sbjct: 298 PRLVGSSVGLHPVWLMFALFAFGALFGFVGMLIAVPAAASVGVLVR 343 >gi|47094916|ref|ZP_00232530.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254898918|ref|ZP_05258842.1| hypothetical protein LmonJ_03855 [Listeria monocytogenes J0161] gi|254911594|ref|ZP_05261606.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935920|ref|ZP_05267617.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47016798|gb|EAL07717.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258608508|gb|EEW21116.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589541|gb|EFF97875.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 378 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGL---SNNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 130 LKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|159035990|ref|YP_001535243.1| hypothetical protein Sare_0322 [Salinispora arenicola CNS-205] gi|157914825|gb|ABV96252.1| protein of unknown function UPF0118 [Salinispora arenicola CNS-205] Length = 487 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 99/297 (33%), Gaps = 14/297 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V + + L + + + EL K ++Q + WL P + Sbjct: 192 RSLATAVVLVGGLAAVVGTLTLVVNEFIQGVPELSEK---SSQGVRQIQDWLRTGPLHLD 248 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + + + + A + I ++ A FFF Sbjct: 249 DRQLDNYINEAEKWINDNTAG---------LTSGALSTAATLAEVLTGTILVLFATFFFL 299 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG I + L L R + + + ++A + L +G + + Sbjct: 300 RDGGRIWRFLVRLLPVNARWKVDDAGRASWQTLGAYVRATVLVAFIDALGIGIFLVIFEI 359 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P L + + + IP GA +S + L+ A + + L+ Sbjct: 360 PFAFPLAALVFLASFIPIVGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQ 419 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 P ++G + + L G+ GV G+ G I P++ L + + + ++ E Sbjct: 420 PLIMGRAVAIHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRLAARSVPETP 476 >gi|70726551|ref|YP_253465.1| hypothetical protein SH1550 [Staphylococcus haemolyticus JCSC1435] gi|68447275|dbj|BAE04859.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 409 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 130/349 (37%), Gaps = 14/349 (4%) Query: 15 MIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++FI Y + F AP++ +LI+ + P+ + E ++ Sbjct: 44 IVIFIFDKISYVFEPFIIIFNTIVAPIILSLILFYLINPVIN-----LMERYNIPRLLGI 98 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 + V + + + + + ++++ + + + + S +T+ Sbjct: 99 IIVFLAIVGGATLIINLLIPLIGDQITRLANNFPKYVDKFNNAIDQVTHFSFLSSFYTQI 158 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S+ + + + F F ++ + ++ LFF +DG + Sbjct: 159 QDWLDSVSNKIPSMVSSYFDGF-GTKIRSFAEAIVNVGVVLVTTPFVLFFMLKDGHKFKE 217 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + F + + + + S G I++ G++L Y + G+ + L Sbjct: 218 YSTKIMPPKFRKDYHDLMEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGLVLAC 277 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A+ +++P P + +I + I + F L + + FI + P ++G +K Sbjct: 278 IAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIVVWTLVQFIEGHFISPNVMGKTLK 337 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L F L+ +G++G+ +G A++ V+ + K K Sbjct: 338 IHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHLFLLFKRRYNK 386 >gi|148262711|ref|YP_001229417.1| hypothetical protein Gura_0632 [Geobacter uraniireducens Rf4] gi|146396211|gb|ABQ24844.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 348 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 120/322 (37%), Gaps = 16/322 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF++ + +L++L++ + P+ + I +++ ++ L L Y Sbjct: 27 YFMRHTLSALLTSLVLAYLLNPLLKRLEKR-GLRRLSALGILYLALATAIVLASLLLVPY 85 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLK 142 + +++ L + VP ++ ++ G M W L + + + Sbjct: 86 LVHQLETLAT----------AVPSYVLNLKGDMDEWQVRLAPYYSGEEGAWLLARGKESL 135 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T+ I L ++I I +FF I + L Sbjct: 136 TSLAQEISGMGYNRLTAILYGIFNLILAPILVFFMLLYKQHIKDLILRLTPPAQRRQLSD 195 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPI 260 + + + + + +GM + + G+++ A +L + V GVIT +++P G A Sbjct: 196 LGKRINRSMERFIIGMFMDCLLVGILIAIALYLLDIQFAVLNGVITGFASIVPFVGVAFA 255 Query: 261 SFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + I G+ + A ++ I + I ++P ++ ++L L F ++ Sbjct: 256 VIPPLLIGYAQSGDPLIIAKVCGVYFLINVIIEGNLIKPLVMRHTLRLNPLAVIFAVMAM 315 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 MG G+ + L A+I + Sbjct: 316 GELMGFWGIVLAIPLAAVIKIC 337 >gi|152976977|ref|YP_001376494.1| sporulation integral membrane protein YtvI [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025729|gb|ABS23499.1| Sporulation integral membrane protein YtvI [Bacillus cytotoxicus NVH 391-98] Length = 372 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 123/347 (35%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ I ++ Y L G P + AL + P+ + +++ + V Sbjct: 13 ILVIMITIIGFYVLIYIAGLIYPFIIALAFAYLINPVVNFLNRNLHFPRALSVLVSLILV 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +L + L+ V + + + +L +K Sbjct: 73 FGAIVGLVTYLVTEVISATTYLLQIVTDKFPTIVQYAQQFALNNIMPLYDDLISKFNHLG 132 Query: 131 QSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +S + ++ G + I + F ++F+++A FF D Sbjct: 133 ESQQHTITQNIQNLGTEATKQMKDLLTAIISGLTNFISALPTTLTVLVFILLATFFISFD 192 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + + Y K I + K + +++ + VP Sbjct: 193 WHRLAHKTRHFLPNRVHGYGKTIFVDLRKASFGFVKAQLTLVSMTTIIVLVGLLILRVPY 252 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + +IT I+ ++P G F IY+ G+ A L + I + + + + P Sbjct: 253 AITIALITGIVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIIVI-VQRQIMEPK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L LPT L G + G LGL +GPV + L+ + K + Sbjct: 312 VLSSNIGLDPLPTLVALFVGFKLYGFLGLIVGPVTLVLLNTLHKAHV 358 >gi|254478928|ref|ZP_05092290.1| sporulation integral membrane protein YtvI [Carboxydibrachium pacificum DSM 12653] gi|214035150|gb|EEB75862.1| sporulation integral membrane protein YtvI [Carboxydibrachium pacificum DSM 12653] Length = 349 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 127/349 (36%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 1 MRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L ++ + + + ++ + Sbjct: 61 LASFILLLILIGVIGSLIAISITQLIYELSSL---AEISTNYANTINDIILNLVDRIRMY 117 Query: 121 EL-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + +++ + S + + + F ++ + ++A FF + Sbjct: 118 YISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 177 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 178 DKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIGFD 237 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++ I+ +P G+ ++Y +I N L + + + +V + + P Sbjct: 238 YPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVV-VVRQMIEP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + GV+ G +GL IGPV + + + K I+ Sbjct: 297 KIVGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKALQKAEII 345 >gi|217964991|ref|YP_002350669.1| membrane protein YueF [Listeria monocytogenes HCC23] gi|290892901|ref|ZP_06555891.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217334261|gb|ACK40055.1| membrane protein YueF [Listeria monocytogenes HCC23] gi|290557477|gb|EFD91001.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307570449|emb|CAR83628.1| membrane protein, putative [Listeria monocytogenes L99] Length = 378 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + + Sbjct: 76 SVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGLSNNSALKD 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + +S + + +D + + + ++ + +F+ ++DG Sbjct: 133 L---DIKQELEKLNISLPKIMSVVVDGVASSFGAIISFVSSFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|55821153|ref|YP_139595.1| hypothetical protein stu1142 [Streptococcus thermophilus LMG 18311] gi|55737138|gb|AAV60780.1| predicted membrane protein of the putative permease (PerM) family [Streptococcus thermophilus LMG 18311] Length = 392 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 131/360 (36%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVL-------SALIIGFTSWPI---YSSF 51 +LN Q ++ ++I+ +I +++ + F+PV+ L+I + + Sbjct: 18 ILNNQAVVSFLILLLIGLTVLIFTKISPIFSPVIQFLTIVMLPLVISMLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + + T ++ + L + + ++ L+ Sbjct: 78 VERTGLNRTMSILVIYAILALLLVWGISTAIPNLQDQILILLRNAPSYISRANSETERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +P LS + I T+ + +I FAS + ++II Sbjct: 138 KLPILSNFHGDLEAMLSDFSARMINYAENFSTSALSWIGTFASTVARVT----VAIILTP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + S F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKLKHSFVSALPTRFRETTVRMLSDINNQLEGYVRGQVTVAIVIAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP G+ I+ V I L++G L ++ IE Sbjct: 254 MFKIVGLRYGMTFGILAGFLNMIPYLGSFIAMVPVVIMGLVQGPTMLIKVLIIF-VIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + VI K+ + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVIVKDIFDWYR 372 >gi|307332296|ref|ZP_07611372.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306882048|gb|EFN13158.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 547 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 18/315 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W++M +I + F +L I P + ++ + ++ + Sbjct: 184 WVLMRVISSVELVVLSFTVALL----ITALLEPTVTRL-RRRGVPRGLATALTFIAGFVV 238 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + F+ + M + E+ +V + RWL P + ++ S +++ Sbjct: 239 MGLVVWFVVWQVMENVDEVSGEVQAGID---DLRRWLLHSPFHVTEKQINHIAKSLREAV 295 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +E + ++ ++ + + F DG I L Sbjct: 296 GANTEQITSAGLEGV---------TVVVEVLTGLLLTMFSTLFLLYDGPKIWSWTLKLVP 346 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + G I+A+ + + +G + VP V L V + A Sbjct: 347 APAREGVAGAGPRAWATLTAYVRGTVIVALIDAIFIGVGLFFLHVPMAVPLAVFIFLFAF 406 Query: 254 IPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP + A+++ + L+ +F + + I L+PF++G +++ L Sbjct: 407 IPLVGAVVSGALAVVVALVTQGVFTGAMVLIVVLAVQQIEGHILQPFILGRAVRVHPLAV 466 Query: 313 FFGLVGGVRTMGLLG 327 + G G+ G Sbjct: 467 VLSVAAGSLIGGIGG 481 >gi|327440180|dbj|BAK16545.1| predicted permease [Solibacillus silvestris StLB046] Length = 409 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 125/335 (37%), Gaps = 9/335 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + +I+ + P + K + +I + V+ L + +L +F + + Sbjct: 69 ILPGVLGVILFYLLRPPLKLLVRWKVPRA-LAILILYIVVIALITLLVLLVFPFLRDQFT 127 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF-- 148 LV + + L+ + ++ + + Q L +++F+ T + Sbjct: 128 NLVQEFPVV--LMALANDLLAFLNNSHFSEYFEKINFDYNQILTDFTDSFITTVKVTLGS 185 Query: 149 ----IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F LS++ + F+ +G + + + L + Sbjct: 186 LATGVATGITGFLSTVTGIILSLVIVPFITFYLLYEGDKMPRFILLLFPPRMRKRIGDVL 245 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + K I S G +++ G+++ + + G+P + LG + I +++P P Sbjct: 246 HDMDKQISSYIQGQILVSFCIGVMMTIGFLIIGMPYALLLGFLAMITSVVPYLGPAIAAT 305 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + I + + L + I I K + P ++G + + + F L+ G Sbjct: 306 PAAIIAIVNSPWLLVKLAIVWTIVQLIEGKFISPQIMGKSLSIHPITIIFVLLTAGSLFG 365 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+ +G ALI V+ + K+ + S+ Sbjct: 366 VPGVVLGIPGYALIKVLISHTYRLFKQRYNRFQSD 400 >gi|163868488|ref|YP_001609697.1| permease protein [Bartonella tribocorum CIP 105476] gi|161018144|emb|CAK01702.1| permease protein [Bartonella tribocorum CIP 105476] Length = 403 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 103/306 (33%), Gaps = 15/306 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ +++ + PI + K F V+ T+ ++ +F+ L+ L +++ Sbjct: 70 LLPFVAGIVLAYFLNPIVQ-LLEKFGIRRVFGTVLITLFIVIIFVAALIILIPIISWQIQ 128 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + VS + + + + S P L+ + L G DFI Sbjct: 129 QFVSDGLPVYMNR------IQTFFVEHDFDWIRDYFGSDPNELRSNIKGLLGE-GSDFIT 181 Query: 151 RFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G ++ + + F+ D + + +DSL + I + Sbjct: 182 SLLNSLLKSGKSIVNIVSLFVVAPVVTFYMLLDWPRMVRAIDSLIPRDHLETVRSIFHEM 241 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISFT 263 + I G + + G +AG+ + +G+ +++ IP + Sbjct: 242 DRAIAGFVRGQGTVCLILGGYYAIGLTIAGLNFGLLIGMFIGLISFIPYIGTMSGLLLSV 301 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ N + I FI L+P LVG + L + F L Sbjct: 302 GIAWVQFYPNNWGGIIVVLALFLIGQFIEGYVLQPKLVGSSVGLHPVWLMFSLFAFSSLF 361 Query: 324 GLLGLF 329 G G+ Sbjct: 362 GFTGML 367 >gi|160914502|ref|ZP_02076717.1| hypothetical protein EUBDOL_00508 [Eubacterium dolichum DSM 3991] gi|158433660|gb|EDP11949.1| hypothetical protein EUBDOL_00508 [Eubacterium dolichum DSM 3991] Length = 380 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 65/368 (17%), Positives = 125/368 (33%), Gaps = 25/368 (6%) Query: 1 MRETMLNPQGIMRWMIMFII---LVSLYFLKGF-------------FAPVLSALIIGFTS 44 MRET + I+FII + ++ + F P + ++I F Sbjct: 1 MRETDKKLNRLTMKNILFIITFTIALVWVILHFNECIEAALMILGLCKPFIYGIMIAFVF 60 Query: 45 WPIYSSFISKKEE------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 S F K + + A++A + ++ L + + ++ L+ + Sbjct: 61 HLPLSYFQRKLPKSIKGKTRNIVAAILALLVIIGLLTFIFWIVVPQVVDSVRSLIVTLPG 120 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 + + + I G SEL + + F+K + AS F Sbjct: 121 YVEDVMGMLE--QAISGKKIPSELVEQINEFGDGFVEAASNFVKEKLPQLL-SMASGFAN 177 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + ++++ + R + + L + Y + +V K S G Sbjct: 178 GIANTFMAVVIAVYLTVSKDRLIRQLKRALFAFCSEKKYHYLLHVGELVNKTFSSFLTGQ 237 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 A+ G++ + P L VI +IP I AVS L+ N Sbjct: 238 LTEALIIGVLCYIGCLVFRFPYAPILSVIIGCTNIIPIFGAIFGVAVSALLVAFVNPLQG 297 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++G + + P +VGG + L L F + G G +G+ +G ++I Sbjct: 298 VFFVIFGIVLQQFESNLIYPKVVGGSVGLSGLWVLFAITIGGGLFGFVGMLLGLPTFSVI 357 Query: 339 AVIWKESI 346 + +E I Sbjct: 358 YFLLREEI 365 >gi|308070328|ref|YP_003871933.1| hypothetical protein PPE_03578 [Paenibacillus polymyxa E681] gi|305859607|gb|ADM71395.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 355 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 123/351 (35%), Gaps = 24/351 (6%) Query: 14 WMIMFIILVSLYFLKG-----------FFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +IL ++ L+ AP A+II + P+ S +K S Sbjct: 16 TLLGLVILYFIWLLRPLFLHLYEFLKTIIAPFAVAMIISYVLNPVVSMLGGRKVPRS--- 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+V+ ++ V L L M + + ++ N+H + + M + L Sbjct: 73 -----VAVLLIYAVFLASLVVILMNLIPMFIEQLDELNEHLPELTMHAQGLMTNMDSGIL 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + E + T F+ + ++ + +F+ +D Sbjct: 128 PQGVRTGMNQWFFQLENRMATGISSFMDNIGGMI-----NMLFNVFIVPFLIFYILKDFD 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + S + + + + + + G ++ + G++ Y L G+P + Sbjct: 183 VFERTIVSYLPRSRRKAIVSVLKEIDQALGNYVRGQLLVCVIIGVMAYLGYMLIGMPYAL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + A+ ++P P A ++ + ++ + + + + P +VG Sbjct: 243 LLAGVVAVFNIVPYLGPFLGAAPAVVMASTVSLKMVLLVVVVNTCIQVLESNVISPQVVG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G G+ GL + +MA+ V + + K Sbjct: 303 RTLHLHPIAIIFALLVGGEIAGITGLILAVPVMAVFKVGLQHFFAYYVKRK 353 >gi|66046916|ref|YP_236757.1| hypothetical protein Psyr_3687 [Pseudomonas syringae pv. syringae B728a] gi|289677079|ref|ZP_06497969.1| hypothetical protein PsyrpsF_27593 [Pseudomonas syringae pv. syringae FF5] gi|63257623|gb|AAY38719.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] gi|330972386|gb|EGH72452.1| hypothetical protein PSYAR_18005 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 357 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 132/343 (38%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLILVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 347 >gi|300932605|ref|ZP_07147861.1| hypothetical protein CresD4_00930 [Corynebacterium resistens DSM 45100] Length = 385 Score = 94.5 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 107/293 (36%), Gaps = 12/293 (4%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + + A+++ ++ L + ++F + L K A + V Sbjct: 62 VNQLLTRRLHFPRALSALLSLFGLIGLVALGVVFAVNQFASSYQSLADK---AQEGATEV 118 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 W+ D P + S+ + SL + ++N + A G +D + Sbjct: 119 ANWVHDGPLQVPRSD-------NSHSLVTQISQWAQSNSHS-LYSNAVDAGTTTIDTFAA 170 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I+ +IA FFF DG IS+ L L +++ ++A Sbjct: 171 ILICLIATFFFLFDGPKISRFLIGLFPRQSQPDITAAGAAAWSTLKAYARMQIVVASINA 230 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWG 285 L +G W+ G P V + + I + +P + A+++ + G + +A + + Sbjct: 231 LGIGIGAWILGTPLVVPITAVVFICSFVPIVGAVVSGAIAVLIAFVDGGLTHAIIMTIIV 290 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 F+ L+PFL+G +++ L + G L G + A+I Sbjct: 291 IGVHFLETHGLQPFLMGHAVRVHPLAVVVVVAAGTYLFSLAGALFAVPITAMI 343 >gi|126651797|ref|ZP_01723999.1| hypothetical protein BB14905_15335 [Bacillus sp. B14905] gi|126591475|gb|EAZ85582.1| hypothetical protein BB14905_15335 [Bacillus sp. B14905] Length = 399 Score = 94.5 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 122/333 (36%), Gaps = 5/333 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A+I + P+ + + + + +I ++V+ + + ++ ++ + + Sbjct: 61 ILPGVLAVIGYYLLRPLLAILVRWRIPR-IWGILILYIAVIGVITLLVVLVYPFLRDQFT 119 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV + + + + + ++ + ++ +K + Sbjct: 120 NLVQEFPEYFMKFTEKFVAFFNHSRFNDYLDKINFDYNEVVKNFTTDMVKTVKDTAANIA 179 Query: 150 PRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 AS LS++ + LF+ ++G + + + + +I Sbjct: 180 QGVASGITGFLSTLTGIVLSLVTVPFILFYLLKEGEKLPKFMLKVCPPRMRKEVTEIFHD 239 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K I S G ++++ G ++ + + G+ + LG + I +++P P+ + Sbjct: 240 MDKQISSYIQGQILVSMCIGAMVTIGFLIIGMKYALLLGFLAMITSVVPYLGPVIAITPA 299 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + L + I I K + P ++G + + + F L+ G+ Sbjct: 300 VIIALVTSPLMLIKLAIVWTIVQLIEGKFISPQIMGKSLSIHPITIIFVLLTAGSLFGVP 359 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ +G A+ V+ K+ + + Sbjct: 360 GVILGIPGYAIFKVLVTHLFKLFKQRYNRYEDD 392 >gi|255033951|ref|YP_003084572.1| hypothetical protein Dfer_0136 [Dyadobacter fermentans DSM 18053] gi|254946707|gb|ACT91407.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 387 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 121/335 (36%), Gaps = 27/335 (8%) Query: 19 IILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++L+ LY L+ P A +I PIY+ F K +A++ T+ + Sbjct: 34 MVLIGLYLFFHILDSLQEIIVPFAFAGLIAILLNPIYNRFQRWKFNK--IVAIVLTIFIA 91 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + ++F +++ ++V ++ M + + LS Sbjct: 92 ILVVGGIMFFLSSQIVQFGDMVPQLEKKT----------------MKLLDNLQEWLSTTF 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + I+ + + + + + +F I + + Sbjct: 136 GISTEKQMSMLDEAINNSRTYVGKTVNTLFGIISFFVLIPLYIFLLLFYKPLILNFIFEV 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + ++S +G+ I + A + GVP + LGVI AI+ Sbjct: 196 FDENNSDQVAEILQETKGAVQSYIVGLMIETTIIAALNSVALLILGVPYALLLGVIGAIL 255 Query: 252 AMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP GG V I + K + + F+ + + P +V + + Sbjct: 256 NLIPYIGGIIAIALPVLISFITKDGYTTPLLIIGAYTVIQFLDNNIIVPRVVSSKVSVNA 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + ++ G G+ G+F+ +A++ +I+ Sbjct: 316 LISILVVLLGGTLWGVSGMFLSIPFVAVLKIIFDR 350 >gi|325687852|gb|EGD29872.1| permease [Streptococcus sanguinis SK72] Length = 392 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 115/313 (36%), Gaps = 8/313 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + +++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---KFIDDVVTKHISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRESFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + IE I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIIEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMA 336 G+ G+F+G A Sbjct: 346 GIWGVFLGIPAYA 358 >gi|257877173|ref|ZP_05656826.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811339|gb|EEV40159.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 393 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 108/319 (33%), Gaps = 5/319 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P K + + V+ L + ++ + + Sbjct: 58 PIILAGILYYLMNPTVDYLERK-GIKRIYSIFGLFILVVGLIVWGVVVIIPKIQEQSMSF 116 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + +++I S++ + + + L ++ I Sbjct: 117 ADNLPSYLTI---IENKVNEILSDPIFSQVQEQIEASNEKLISSLTDIVQNLSRSTIQNL 173 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S FG + L++I M LF+ +DG ++ + + + + Sbjct: 174 GSFFGAVAT-IVLAVITMPFILFYLLKDGRKLAPYFVKFLPTKMRQPSLVVLKEMNDQVS 232 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ + LG+ + +IP +++L I Sbjct: 233 SYIRGQLTVAFAVAVMFMIGFSIIGLDYAITLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 292 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G + + IE I + + P ++G + + + L+ + GL+G+ +G Sbjct: 293 GGPVLLIQVLIVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKLFGLVGVILGI 352 Query: 333 VLMALIAVIWKESIMAIKE 351 + A V+ Sbjct: 353 PVYAAAKVVITHVFEWYTR 371 >gi|238752065|ref|ZP_04613549.1| permease perM [Yersinia rohdei ATCC 43380] gi|238709765|gb|EEQ01999.1| permease perM [Yersinia rohdei ATCC 43380] Length = 354 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 124/358 (34%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ G Sbjct: 68 WAASIVLVVFGSIALLAVFVVAPTVWQQGNNLIS----------DMPKMLNKFNGFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + + + L + +I + + LFF Sbjct: 118 PSRYPALVDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVVEMVVVGIATYVVFFVMGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF+ + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + E Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAE 354 >gi|89095235|ref|ZP_01168157.1| transporter, putative [Oceanospirillum sp. MED92] gi|89080489|gb|EAR59739.1| transporter, putative [Oceanospirillum sp. MED92] Length = 366 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 132/352 (37%), Gaps = 11/352 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M Q + ++ +Y L +P L ++ + S PI + S T + Sbjct: 1 MTESQRWFFLIFALVMAGLVYLLAPILSPFLVGALLAYLSDPIADRLEAA-GLSRTTSVI 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I +++ + ++ L ++++ L+ ++ A +P M L Sbjct: 60 IVFIAMTAIVVMMFLLFIPKLGMQIQLLLERIPQAISLFEN-----QVLPWLMSTFSLEA 114 Query: 125 KHLSHPQSLKILSETFLKTN-GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 IL KT+ + + +R M + + +++ + + F+ RD Sbjct: 115 SAFEFSNLKSILIGDLQKTSDIMAQLLGGLTRSSMAIVAWVANLVLIPVVTFYLLRDWDV 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ L +R +V+ + G ++ + G+V W+ G+ + Sbjct: 175 MMDKVKRLLPRNIEPKVSLWARECDEVLGAFMKGQLLVMVALGVVYAVGLWIVGLDLALL 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL---FIVDKTLRPFL 300 +G+I + +++P I V+ + + L GA+ + + L P L Sbjct: 235 VGMIAGLASIVPYMGFIIGIVVAG-VAAFMQFQDPIVLGYVGAVFIVGQMLEGMLLTPLL 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG I L + F ++ G + G +G+ + + A+I V+ + K + Sbjct: 294 VGDRIGLHPVAVIFAIMAGGQLFGFVGVLLALPVAAVIMVLLRHLHEGYKSS 345 >gi|169828348|ref|YP_001698506.1| hypothetical protein Bsph_2843 [Lysinibacillus sphaericus C3-41] gi|168992836|gb|ACA40376.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 399 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 122/333 (36%), Gaps = 5/333 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A+I + P+ + + + + +I ++V+ + + ++ ++ + + Sbjct: 61 ILPGVLAVIGYYLLRPLLAILVRWRIPR-IWGILILYIAVVGVITLLVVLVYPFLRDQFT 119 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV + + + + + ++ + ++ +K + Sbjct: 120 NLVQEFPEYFMKFTEKFVAFFNHSRFNDYLDKINFDYNEVVKNFTTDMVKTVKDTATNIA 179 Query: 150 PRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 AS LS++ + LF+ ++G + + + + +I Sbjct: 180 QGVASGITGFLSTLTGIVLSLVTVPFILFYLLKEGEKLPKFMLKVCPPRMRKEVTEIFHD 239 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K I S G ++++ G ++ + + G+ + LG + I +++P P+ + Sbjct: 240 MDKQISSYIQGQILVSMCIGAMVTIGFLIIGMKYALLLGFLAMITSVVPYLGPVIAITPA 299 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + L + I I K + P ++G + + + F L+ G+ Sbjct: 300 VIIALVTSPLMLIKLAIVWTIVQLIEGKFISPQIMGKSLSIHPITIIFVLLTAGSLFGVP 359 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ +G A+ V+ K+ + + Sbjct: 360 GVILGIPGYAIFKVLVTHLFKLFKQRYNRYEDD 392 >gi|16802627|ref|NP_464112.1| hypothetical protein lmo0584 [Listeria monocytogenes EGD-e] gi|47096877|ref|ZP_00234456.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|224498663|ref|ZP_03667012.1| hypothetical protein LmonF1_02766 [Listeria monocytogenes Finland 1988] gi|224502115|ref|ZP_03670422.1| hypothetical protein LmonFR_06292 [Listeria monocytogenes FSL R2-561] gi|254828349|ref|ZP_05233036.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254900183|ref|ZP_05260107.1| hypothetical protein LmonJ_10230 [Listeria monocytogenes J0161] gi|254911263|ref|ZP_05261275.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935591|ref|ZP_05267288.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284800864|ref|YP_003412729.1| hypothetical protein LM5578_0612 [Listeria monocytogenes 08-5578] gi|284994050|ref|YP_003415818.1| hypothetical protein LM5923_0611 [Listeria monocytogenes 08-5923] gi|16409960|emb|CAC98663.1| lmo0584 [Listeria monocytogenes EGD-e] gi|47014742|gb|EAL05696.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258600742|gb|EEW14067.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258608171|gb|EEW20779.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284056426|gb|ADB67367.1| hypothetical protein LM5578_0612 [Listeria monocytogenes 08-5578] gi|284059517|gb|ADB70456.1| hypothetical protein LM5923_0611 [Listeria monocytogenes 08-5923] gi|293589194|gb|EFF97528.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 390 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 124/336 (36%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI K + + + + ++ L I Sbjct: 37 IAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKR-GWAIALLYLVIIGLLI 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L S +L K ++ + Sbjct: 96 LLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSR---SSLFDQLKDKLNTNMSDIMK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I S G + + L+I+ + LF+ +DG + L + Sbjct: 153 TLSTKGTSVINSAISSIGSIVGTVT-EVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A+ +++ I S G I+++ G++L Y + G+P + L +I A +++P Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + I + + L + + + K + P ++G +K+ + F Sbjct: 272 YLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G+LG+ A++ VI + K Sbjct: 332 ILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKR 367 >gi|327489296|gb|EGF21089.1| permease [Streptococcus sanguinis SK1058] Length = 392 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 109/313 (34%), Gaps = 8/313 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + + + S + + S T +N Sbjct: 110 LQHQVMAFVRNVPAYLKQADKFIDDV----VTKYISADFNPQIEEYTSNLSSQITDWASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRESFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + +E I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMA 336 G+ G+F+G A Sbjct: 346 GIWGVFLGIPAYA 358 >gi|56963750|ref|YP_175481.1| transporter [Bacillus clausii KSM-K16] gi|56909993|dbj|BAD64520.1| transporter [Bacillus clausii KSM-K16] Length = 378 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 119/342 (34%), Gaps = 15/342 (4%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ SL+ F+ P A + + P+ F K S F ++ + Sbjct: 16 IAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKLRFSRGFASLFGLLGG 75 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHL 127 + + L L + +++ +V + G + + P L+ Sbjct: 76 ILVISAILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETVWPYWQQVLGLFDTID 135 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL-------DYCLSIIFMIIALFFFYRD 180 ++ L T +F+ ++ ++ +F+I++++F + Sbjct: 136 VGTHNVLSEGIDQLGTVLGNFLGDIGQGVVDFLTTALLGLPNFLVAFLFIILSIYFMGKS 195 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 D K+ + + + + I+ ++ + + + Sbjct: 196 WSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVTACIVFVGLLIIQIDN 255 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P G IYL I G++ + + I + I+ + L P Sbjct: 256 AWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAILYIIVV-IIRQLLEPK 314 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + L + L G+R G GLF+GP ++ I ++ Sbjct: 315 VLSSHMNLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVIL 356 >gi|322381290|ref|ZP_08055293.1| hypothetical protein PL1_0204 [Paenibacillus larvae subsp. larvae B-3650] gi|321154866|gb|EFX47137.1| hypothetical protein PL1_0204 [Paenibacillus larvae subsp. larvae B-3650] Length = 390 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 122/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + +K P++ A I + PI K ++I V+ + Sbjct: 52 ISFIFVPIGIIVKTVMLPLILAGIAFYLLNPIVDLLERHKINR--IYSIIGLFLVIIGVV 109 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + + + ++++ V ++G V ++ G + K + + Sbjct: 110 TILILTVFPFVKD--QVLNLVDNLPKYGQQVAEKFNEFAGTSLFHQFNDKLNNVSTDIMN 167 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + G + + L+I + LF+ +DG + + + ++ Sbjct: 168 YISEKSSVILQNAWASVSGVVGTVT-EIVLAIATLPFILFYLLKDGRKLPRFILNMLPVK 226 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + I S G I++ G +L Y + G+ + L +I ++ +++P Sbjct: 227 TREHTYQMMYEMHHQISSYIRGQIIVSFCIGFLLFVGYLVIGLNYALVLAIIASLTSIVP 286 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ +I + + L + I I K + P ++G + + + F Sbjct: 287 YLGPVIAITPAIIISAVTSPAMLVKLAVVWIIVQSIEGKFISPQVMGKNLSVHPITIIFV 346 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G G+LG+ A++ VI Sbjct: 347 ILIGGNLFGILGIIFAVPGYAVLKVI 372 >gi|294626250|ref|ZP_06704853.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664600|ref|ZP_06729940.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599396|gb|EFF43530.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605628|gb|EFF48939.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 388 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 127/330 (38%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S ++ V LF++ L+ Sbjct: 25 VLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNVAVMLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIDALPQMRNWAIG-----TAIPWLEAKTGMQLMAWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 ++++ V+ G ++ + G + + + G+ + +G+I +++ IP Sbjct: 199 GTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIAGLISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|209559329|ref|YP_002285801.1| hypothetical protein Spy49_0794 [Streptococcus pyogenes NZ131] gi|209540530|gb|ACI61106.1| Membrane protein, putative [Streptococcus pyogenes NZ131] Length = 393 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQAMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLFKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|111657407|ref|ZP_01408160.1| hypothetical protein SpneT_02001377 [Streptococcus pneumoniae TIGR4] Length = 332 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 114/323 (35%), Gaps = 11/323 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ + ++ + PI K +++ +F++ LF+ + + + Sbjct: 1 MLPVILSGLLYYLLNPIVDWMEKHKVNR--------VIAITIVFVIIALFIIWGLAVAIP 52 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQSLKILSETFLKTNGID 147 L +V+ ++ + I G+ A L + L + T L + Sbjct: 53 NLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQATVLASKVSS 112 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + S F +++I + LF+ RDG + L ++ V Sbjct: 113 QAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFIPRKLKEPVGQVLSDV 172 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + + G +AI ++ + + G+ V LGV I+ ++P ++ Sbjct: 173 NQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVPYLGSFLAMLPAL 232 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + + + +E I + + P ++G + + + F L+ G+ G Sbjct: 233 VLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFVLLTSGSMFGIWG 292 Query: 328 LFIGPVLMALIAVIWKESIMAIK 350 + +G + A V+ K Sbjct: 293 VLLGIPVYASAKVVISAIFEWYK 315 >gi|218516479|ref|ZP_03513319.1| putative permease protein [Rhizobium etli 8C-3] Length = 161 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A IA + ++ ++P+ F Y E++ ++ + AN+ G P W++ +P G + Sbjct: 83 AATIAIIMIVTFLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLD 142 Query: 121 ELWTKHLSHPQSLKILSET 139 ELWTK++ P +L L + Sbjct: 143 ELWTKYIGSPGALGELIQA 161 >gi|327459873|gb|EGF06213.1| permease [Streptococcus sanguinis SK1057] Length = 392 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITVVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + +++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---KFIDDVVTKYISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIVVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRESFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + IE I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIIEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G+F+G A V ++ ++F Sbjct: 346 GIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|299537107|ref|ZP_07050410.1| hypothetical protein BFZC1_13853 [Lysinibacillus fusiformis ZC1] gi|298727348|gb|EFI67920.1| hypothetical protein BFZC1_13853 [Lysinibacillus fusiformis ZC1] Length = 399 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 127/333 (38%), Gaps = 5/333 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A+I + P+ + + + + +I ++V+ + + ++ ++ + + Sbjct: 61 ILPGVLAVIGYYLLRPLLAILVRWRIPR-IWGILILYIAVIGVITLLVVLVYPFLRDQFT 119 Query: 91 ELVSKVVLANQHGIP-VPRWLSDIPGGMWASEL---WTKHLSHPQSLKILSETFLKTNGI 146 L + + +L+ + ++ + + L++ + + + + TN Sbjct: 120 NLAQEFPEYFMAFTQNIVEFLNHSRFNEYLDKISFNFDEVLNNFTTDMVKTVKDMATNVA 179 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F LS++ + LF+ ++G + + + + I Sbjct: 180 QGVASGITGFLSTLTGILLSLVTVPFILFYLLKEGEKLPKFMLKVCPPRMRKEVTDIFHD 239 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K I S G ++++ G ++ + + G+ + LG + I +++P P+ + Sbjct: 240 MDKQISSYIQGQILVSMCIGAMVTIGFLIIGMKYALLLGFLAMITSVVPYLGPVIAITPA 299 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + L + I I K + P ++G + + + F L+ G+ Sbjct: 300 VIIALVTSPLMLIKLAIVWTIVQLIEGKFISPQIMGKSLSIHPITIIFVLLTAGSLFGVP 359 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ +G A+ V+ K+ + + Sbjct: 360 GVILGIPGYAIFKVLVTHLFKLFKQRYNRYEDD 392 >gi|327469594|gb|EGF15063.1| permease [Streptococcus sanguinis SK330] Length = 392 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 122/337 (36%), Gaps = 8/337 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + R++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---RFIDDVVTKHISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F A + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRASFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + IE I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIIEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G+F+G A V ++ ++F Sbjct: 346 GIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|324990909|gb|EGC22844.1| permease [Streptococcus sanguinis SK353] Length = 392 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + +++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---KFIDDVVTKYISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIVVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRESFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + +E I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G+F+G A V ++ ++F Sbjct: 346 GIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|289664536|ref|ZP_06486117.1| permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667897|ref|ZP_06488972.1| permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 388 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 127/330 (38%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S ++ V LF++ L+ Sbjct: 25 VLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNVAVMLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIDALPQMRNWAIG-----TAIPWLEAKTGMQLMAWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 ++++ V+ G ++ + G + + + G+ + +G+I +++ IP Sbjct: 199 GTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIAGLISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|153841626|ref|ZP_01993425.1| membrane protein [Vibrio parahaemolyticus AQ3810] gi|149745457|gb|EDM56708.1| membrane protein [Vibrio parahaemolyticus AQ3810] Length = 144 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 2/137 (1%) Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN 274 +G + AI +GL G WLAG P + G + + IP G + + + YL + G+ Sbjct: 1 MGSFLTAIAQGLAGGIGMWLAGFPG-LFWGTMMGFASFIPVVGTALIWIPAAAYLFLTGD 59 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + A L W + + +D LRP L+ G + L FF L+GG+ GL+GL GP++ Sbjct: 60 MTWAIFLTAWSVVIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLI 119 Query: 335 MALIAVIWKESIMAIKE 351 A+ V++ K+ Sbjct: 120 FAVTMVLFNIYEEEFKD 136 >gi|330470380|ref|YP_004408123.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032] gi|328813351|gb|AEB47523.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032] Length = 433 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 107/315 (33%), Gaps = 14/315 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+ A+++ P + + + + V+ + + L + + + Sbjct: 111 IIPLAVAMLLSALLAPAVGWLLRARLP-KSLATAVVLVAGLAAVVGTLTLVVNEFIKGVP 169 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL +K ++Q + WL P + ++L Q + +E F Sbjct: 170 ELAAK---SSQGLQQIQDWLKTGPLHLSDNDLDRYLEEAQQWVNNNTEQFTSG------- 219 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A + I ++ A FFF RDG I + + L R Sbjct: 220 --ALSTATTLAEVLTGTILVLFAAFFFLRDGNMIWRFVVRLLPVAARWKVDDAGRASWAT 277 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 + + ++A + + +G + +P L + + A IP GA +S + Sbjct: 278 LVAYVRATVLVAFIDAVGIGIFLVIFDIPFAFPLAALVFLGAFIPIIGATLSGGVAVLVA 337 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ A + + L+P ++G + + L GL GV G+ G Sbjct: 338 LVDSGPVTALIILGVVIGVQQVEGHILQPLIMGRAVAIHPLAVIIGLAAGVVLAGITGAL 397 Query: 330 IGPVLMALIAVIWKE 344 + L+A++ + Sbjct: 398 VAVPLIAVLNTAVRR 412 >gi|262195606|ref|YP_003266815.1| hypothetical protein Hoch_2385 [Haliangium ochraceum DSM 14365] gi|262078953|gb|ACY14922.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 542 Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 5/205 (2%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + F + + +++ F D + SL + + Sbjct: 300 QTSIGDLVSFGQSLMIGLARSVFTFFLVMMVGAFILLDLEKLHGFARSLIPMAYRDDFDL 359 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 I++ + + + G II + G++ ++ V + L ++ IM+++P G+ +S Sbjct: 360 IAKGINRGLSGVIRGQLIICLVNGVLTYIGLFIFNVEYALVLALVAGIMSVVPIFGSILS 419 Query: 262 FTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 V I L G ++ A F W + L P ++ ++ + F L+ Sbjct: 420 TIPVVIVALFSGEGGLDVARALAAFAWIVGIHLLEANVLDPKIMSSAARIHPVLVIFALI 479 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIW 342 G GL+G + + +++ V++ Sbjct: 480 VGEHYFGLVGAILAVPVTSMVQVLF 504 >gi|283768904|ref|ZP_06341814.1| putative membrane protein [Bulleidia extructa W1219] gi|283104457|gb|EFC05831.1| putative membrane protein [Bulleidia extructa W1219] Length = 382 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 119/336 (35%), Gaps = 18/336 (5%) Query: 31 FAPVLSALIIGFTSWPI-----YSSFISKKEE---SSTFLAVIATVSVMCLFIVPLLFLF 82 P + + F PI Y+ S F ++++ + + + + L Sbjct: 48 LMPFVFGFVFAFLLNPIRKIVEYNVLKSVHWSARIKRVFASLVSILVFLLVLVAFFAILI 107 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ S Q G R+L +P + +E+W Q+ + +L Sbjct: 108 PQLYASVQTFSSAFPRYMQSGY---RYLESLP--LNLNEVWKYLNEALQTFVQSLQRWLT 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 N + + + F L +I F+ D + QL + + P Sbjct: 163 LNSAGGLSQLYYS-AVSFARGILDFFIGVIIAFYILLDEEKLKSQLRKVVFSVIPFKRAT 221 Query: 202 ---KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+ R++ + G + ++ G++ + G+P + VI + MIP Sbjct: 222 SFFKVCRMIIDNFNNFIAGKALDSLIIGIICYVGCLILGIPYAPLVSVIVGVTNMIPVFG 281 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + L ++ + + + P ++G + LP + F ++ Sbjct: 282 PFIGGIPLTIMVALIHPLRGLTLGIFIFVLQQVDGNIIGPRILGSAVGLPSIWVMFSIIA 341 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G++G+ IG L ++I ++ + E K+ Sbjct: 342 GGALFGIVGMVIGVPLFSVIYILVRNKTNERLEEKK 377 >gi|328956583|ref|YP_004373969.1| hypothetical protein CAR_c02020 [Carnobacterium sp. 17-4] gi|328672907|gb|AEB28953.1| conserved hypothetical protein [Carnobacterium sp. 17-4] Length = 369 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 121/332 (36%), Gaps = 9/332 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 AP++ A I + PI K + + +I ++++ + + F Sbjct: 22 IFSTLVAPLILAFIFYYLLNPIVDWMERHKIKR-IWGVLILFIAIIGILAGLVALAFPPI 80 Query: 86 MLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ LV+ + GI + W+++ P SE ++ + ++ T Sbjct: 81 QEQITSLVNNFPSYVDSMGITILSWVANTPLESAVSEFIEWLNGWVSNIPSVVVSYFDTA 140 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F++ ++ + II FF +D + + F K I Sbjct: 141 VSGLTSVFSTVSNVVVVIVTFPIIV-----FFLLKDDEKFFNYVLKIIPPKFRKDTKNIF 195 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + S G +I++ G+++ + + G+ L ++ +++P GA ++ Sbjct: 196 ATINEQVGSYIKGQLLISLSLGIMMFIGFTVIGLEYSGILAIVATFTSIVPYIGAALAMI 255 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I + F L + + F+ + P ++G + + L L+ + Sbjct: 256 PAVIVAFTI-SWFMVLKLIIVWVVVQFVDGNLIEPNIMGKNLNVHPLTIIIVLLVLGDLL 314 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GL +G + A+ V+ K+ K Sbjct: 315 GFVGLILGVPIYAISRVLVTFVFRKFKQRYNK 346 >gi|147919164|ref|YP_687103.1| hypothetical protein RCIX2736 [uncultured methanogenic archaeon RC-I] gi|110622499|emb|CAJ37777.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 349 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 119/340 (35%), Gaps = 19/340 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ I+ +F + V+ + + + PI + + Sbjct: 25 IIVLLIVAAVAFFFRPLLDGVVFGVFFAYVTRPIKDFLRKYTKYAPMLA--------TFC 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P++ +F + +E++ +S + + + +EL + ++ Sbjct: 77 ILLPVIAIFSFAAIELRNQISWFSDHGNEALAQVN--AALEALGVPAELVVQLNDVLMNI 134 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + F T I G L I ++ +DG I + SL Sbjct: 135 SQYAFAFAATVPIRETFTSLLLLGTNAL-------VSIFVCYYLLKDGDRIISTIMSLTP 187 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 F + +++ ++G A+ + ++L VP I AM Sbjct: 188 ARFQPAVSFFTVEADRILFGIYIGTFYTALFIATMSAVLFFLFSVPYLALCTAFVFIAAM 247 Query: 254 IPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLP 311 +P + + F V+ Y+ I + FL I +++ D +RP+L+ + L Sbjct: 248 VPILSGMMVFIPVAAYMYIYRDPAIGILFFLSAIIFVYLPPDFLIRPYLINRASNIHPLL 307 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +GG GL G F P+ + L+ +++ + +E Sbjct: 308 IIMSFIGGGLAGGLSGFFAAPLAVGLLIAVYRTYLKYGEE 347 >gi|257870978|ref|ZP_05650631.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257805142|gb|EEV33964.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 387 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 109/317 (34%), Gaps = 5/317 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P K + + V+ L + ++ + + Sbjct: 58 PIILAGILYYLMNPAVDYLERK-GIKRIYSIFGLFILVIGLIVWGVVVIVPKIQEQSMSF 116 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V + + +++I S++ + + + L ++ I Sbjct: 117 VENLPGYLDI---IENKVNEILSDPIFSQVQDQLEASNEKLIASMTDIIQNLSRSTIQNI 173 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S FG + L++I M LF+ +DG ++ + + + + Sbjct: 174 GSFFGAVAT-VVLAVITMPFILFYLLKDGRQLAPYFVKFLPTKMRKPSLTVLKEMNDQVS 232 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + L G+ + LG+ + +IP +++L I Sbjct: 233 SYIRGQLTVAFAVAIMFMVGFSLIGLDYAITLGIAAGFLNLIPYLGSFLAMVPAVFLGIV 292 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G + + IE I + + P ++G + + + L+ + GL+G+ +G Sbjct: 293 GGPVLLVKVLVVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKLFGLVGVILGI 352 Query: 333 VLMALIAVIWKESIMAI 349 + A VI Sbjct: 353 PVYAAAKVIITHIFEWY 369 >gi|255022095|ref|ZP_05294099.1| Putative permease often clustered with de novo purine synthesis [Acidithiobacillus caldus ATCC 51756] gi|254968453|gb|EET26011.1| Putative permease often clustered with de novo purine synthesis [Acidithiobacillus caldus ATCC 51756] Length = 372 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 124/347 (35%), Gaps = 13/347 (3%) Query: 11 IMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + R ++ ++V+ Y L P L A I+ + P+ S T Sbjct: 11 LQRLYVLAALVVAAYLLYRLGAVLTPFLIAGILAYLGNPLVSRLQRWGLSR--------T 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V +F++ LL + + + + +L + L ++ L + Sbjct: 63 VGTTLVFVLVLLVVAGIVTALLPAIRHQALLFLDYTRQYAELLQRQIVPELSARLGIQLD 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + + + + R A L L I+ + + F+ RD + ++ Sbjct: 123 SQTITHYASANAQKLADWLGKSLRIAVSSSSGILATLLDIVLIPVLGFYLLRDWPQLLER 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + ++R ++ + G ++ + G + G+ + + +G++ Sbjct: 183 IRELIPRRRLPTVELLARDANTMLMAFLRGQILVMLALGTSYAIGLSIVGLQTAILIGLL 242 Query: 248 TAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ +P IS +++ + G +++ I + P+LVG I Sbjct: 243 AGFLSFVPYLGVISGISMATLAMYIQTGAFLPMVGVWVVFGIGQILESMVYTPYLVGERI 302 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G G +GL + + A++ + + + ++ Sbjct: 303 GLHPVLVIFAVLAGGELFGFVGLLLALPVTAVLIALLRHAQRWYLDS 349 >gi|323351829|ref|ZP_08087480.1| membrane protein [Streptococcus sanguinis VMC66] gi|322121886|gb|EFX93618.1| membrane protein [Streptococcus sanguinis VMC66] gi|324993171|gb|EGC25091.1| permease [Streptococcus sanguinis SK405] gi|324995526|gb|EGC27438.1| permease [Streptococcus sanguinis SK678] gi|325696807|gb|EGD38695.1| permease [Streptococcus sanguinis SK160] gi|327461441|gb|EGF07772.1| permease [Streptococcus sanguinis SK1] gi|327473746|gb|EGF19164.1| permease [Streptococcus sanguinis SK408] Length = 392 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 115/313 (36%), Gaps = 8/313 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + +++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---KFIDDVVTKYISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRESFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + +E I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMA 336 G+ G+F+G A Sbjct: 346 GIWGVFLGIPAYA 358 >gi|150390221|ref|YP_001320270.1| hypothetical protein Amet_2457 [Alkaliphilus metalliredigens QYMF] gi|149950083|gb|ABR48611.1| protein of unknown function UPF0118 [Alkaliphilus metalliredigens QYMF] Length = 411 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 122/326 (37%), Gaps = 4/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L +P + A++I + P+ K + ++ + + C+ ++ L L Sbjct: 88 LLMEILSPFIIAIVIAYILNPLIHYLQVK-GIDRMWGVLLVYLFISCMILILSLTLVPRI 146 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E++ L++ + + L + L T+ S + L++ + + Sbjct: 147 TEEVRNLMAFLPQYSNDSYEHLHNL-YLRYNQNLESLPTEFESVKELLRLNIDRIQEIVF 205 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + + ++++ + I +F+F +D + + L I++ Sbjct: 206 G--IASSFTSTLLGLFSRLVNLVLIPILVFYFLKDAKGFKKAIILLIPRYLRKNVMHIAK 263 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V V+ G I+A G++ + + V V +G+I I ++P P+ Sbjct: 264 DVDSVLGGFIRGQLIVAGFVGILTMISLLVLRVEFAVLVGLIAGIANIVPYFGPVVGIVP 323 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + A + + + I L P +VG + L + L+ G R +G+ Sbjct: 324 GVLFALLDGPIKAIWVVVVFTVIQQIESAILAPKIVGKSVGLHPVLVILALLVGGRFLGI 383 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 +GL I + I V+ K I + + Sbjct: 384 VGLLIAVPVAGTIKVLGKHLISHVTK 409 >gi|255028980|ref|ZP_05300931.1| hypothetical protein LmonL_07086 [Listeria monocytogenes LO28] Length = 354 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 118/332 (35%), Gaps = 14/332 (4%) Query: 17 MFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 MF++L Y F P+L A + + P+ +K ++ ++ Sbjct: 1 MFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LLSVIVIFIA 59 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++ ++ L ++ EL + Q +WL + S L + Sbjct: 60 FITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQGL---SNNSALKDIDMKQ 113 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +S + + +D + + + ++ + +F+ ++DG + Sbjct: 114 ELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSG 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + K+I + + K I + I + GL Y + G P + G I Sbjct: 174 KFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYALLFGFIAG 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP P A ++ + + + A + + I I L P+++G + + Sbjct: 234 ATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L+ G+ G+ +G L A++ I Sbjct: 294 LTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 325 >gi|16799980|ref|NP_470248.1| hypothetical protein lin0908 [Listeria innocua Clip11262] gi|16413357|emb|CAC96140.1| lin0908 [Listeria innocua Clip11262] gi|313619742|gb|EFR91354.1| permease [Listeria innocua FSL S4-378] gi|313624438|gb|EFR94449.1| permease [Listeria innocua FSL J1-023] Length = 378 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 121/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + ++FI+L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAVLFILLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVILIFIAFIALVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLQSL---SNNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + S +S + + +D + + + ++ + +F+ ++DG Sbjct: 130 LKDIDMKQELSKLNISLPKIMSVVVDGVASSFGAIISFVSGFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRTEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|56807948|ref|ZP_00365766.1| COG0628: Predicted permease [Streptococcus pyogenes M49 591] Length = 393 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQAMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSGHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLFKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|315925492|ref|ZP_07921702.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621033|gb|EFV01004.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 510 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 101/349 (28%), Gaps = 29/349 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK-------KEES--------------STFLAVIATVS 69 P+ +II F P+ + + + + +I Sbjct: 100 MMPITFGVIIAFIMTPVLNFVEGRWLVPLFERRGRDVAGPGFTKDRRRMRSLSVLITMCF 159 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-----WASELWT 124 ++ + + + + + ++V + V W+S +PG W + W Sbjct: 160 LLLCLYALTMIVVPQLLASLNQFFTQVPAYVDN---VNTWISRLPGNQPMLRKWLNAAWN 216 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + + +F + + +I I L Sbjct: 217 TSSAQLTKLIKTRVLPNMGTILQTLTTQLVGAVRVFFNLIVGLIVAIYLLASKETFCAQG 276 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +L R + G I + G++ + G P V + Sbjct: 277 KKIAYALFRPNTANEVVGAFRFINATFNGFISGKIIDSAIIGVLCFLGDSIIGTPYPVLV 336 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +IP P + L++ A ++ I L P ++G Sbjct: 337 SVIVGVTNIIPFFGPYIGAIIGGVLILLIQPLQALYFVIFVIILQQFDGNVLGPKILGDS 396 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F ++ G+LG IG L A+I + I + + Sbjct: 397 TGLSSFWVIFAIMIFGGLFGVLGWVIGVPLFAVIYAFARRVINHFLKKR 445 >gi|258511994|ref|YP_003185428.1| hypothetical protein Aaci_2027 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478720|gb|ACV59039.1| protein of unknown function UPF0118 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 354 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 109/324 (33%), Gaps = 12/324 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F L++LII + P ++ S A + V + L + Sbjct: 36 VLSSLFYTFLASLIITYILQPAVDVLHRRRVPRSA-----AILIVYAVIAAILAVVVLNL 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++++ + +P +++ + +L + I + + Sbjct: 91 IPVISRQIAQLSSS------LPAITAELSRWIDMINSRKTYLPNAVRTGIENALNQLEHR 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ P L+ + +F+ +D +I + + + + + + R Sbjct: 145 VEVAPTGLFSVVTSTLNAIFMAFVVPFLVFYMLKDAKAIGRGMVRMAPAKYKHRVRLVLR 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTA 264 + + G +I + GL+ Y + +P + LG +IP PI Sbjct: 205 AIDDTLGGYVRGQFLIMLAVGLLSFIGYLIIRLPYALLLGAFLGFADIIPYLGPIIGIAP 264 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L + + I L P ++G + L + L+ G G Sbjct: 265 AVIIALTTSGWPMLVKVVIVNIAVQQIEGNILSPQIMGRTLHLHPMAIVAALIVGGEAGG 324 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 +LGL + +A+ V+W + A Sbjct: 325 ILGLILAVPALAVCKVVWTQWREA 348 >gi|315281596|ref|ZP_07870191.1| permease [Listeria marthii FSL S4-120] gi|313614759|gb|EFR88308.1| permease [Listeria marthii FSL S4-120] Length = 378 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 120/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I+F++L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAILFVLLQMKYIFSPVGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q + S+ P Sbjct: 76 SVILIFIAFIVLVVLAVMQLGPTLADQVTELAKAIPGYWQDFEKWLQSFSNNPAFQGVD- 134 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S +S L + +D + + + ++ + +F+ ++DG Sbjct: 135 -----IKEELSKLNISLPKLMSVVVDGVASSFGAIISFVSGFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|311032815|ref|ZP_07710905.1| hypothetical protein Bm3-1_20134 [Bacillus sp. m3-13] Length = 355 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 127/331 (38%), Gaps = 24/331 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI+ + F+ F P+L A + + P+ + K T ++ +++ Sbjct: 29 FIVNPIISFITTLFFPILFAGFLFYILKPLVNFLAKSKYVPRTLAIILVFSAII------ 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + V ++ D P + +E TK L + ++S Sbjct: 83 -----------GGAVLGGFSVGGKIEEQVVQFAEDFPAFLEKNEEQTKELMDDNNFGLIS 131 Query: 138 ETFLKTNGIDFIPRFASRFGMI-------FLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 K G+ F+ + R G ++ ++ + LF+F +DG + + Sbjct: 132 YEEAKKRGLAFLKEQSQRIGENVSSIISSITNFVTILVVVPFILFYFLKDGHKLLPFILK 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K++ + K + + G I+A+ G ++ Y + G+ + L + I Sbjct: 192 MLPNKHHDEGKRLLTDIDKTLSTYIGGQMIVALVNGFLMYIGYLIIGLDYALVLALFIVI 251 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A++P P ++ + + + F + + AI I + P ++G + + L Sbjct: 252 TAVVPIIGPALGVLPAVIIGLMTDPFMVVKILILLAIVQQIEGNLVSPQIIGNKLSIHPL 311 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ + G +G+ + + +++ V+ Sbjct: 312 TVILLLLAAGKLYGFIGILLAVPVYSVLKVV 342 >gi|240850720|ref|YP_002972120.1| permease protein [Bartonella grahamii as4aup] gi|240267843|gb|ACS51431.1| permease protein [Bartonella grahamii as4aup] Length = 403 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 107/320 (33%), Gaps = 15/320 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ ++ P ++ +++ + PI + + F V+ T+ ++ F+ Sbjct: 56 LIFFVLFMFVFGSILLPFVAGIVLAYFLNPIVQ-LLERFGIRRVFGTVLITLFIVITFVA 114 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ L ++++ +S + + + + S P L+ Sbjct: 115 ALVILIPVISWQIQQFMSDGLPVYINR------IQTFFVEHDFDWIRRYFGSDPNELRNN 168 Query: 137 SETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + FL G DFI + G ++ + + F+ D + +DSL Sbjct: 169 IKGFLGE-GSDFITSLLNSLLKSGKSIVNIVSLFVVAPVVAFYMLLDWPRMVTAIDSLIP 227 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I + + I G + + G +AG+ + +G+ +++ Sbjct: 228 RDHLETVRSIFHEMDRAIAGFVRGQGTVCLILGGYYAIGLTIAGLNFGLLIGMFIGLISF 287 Query: 254 IP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P + ++ N + I FI L+P LVG + L Sbjct: 288 VPYIGTMSGLVLSVGIAWVQFYPNNWGGIIVVMALFLIGQFIEGYILQPKLVGSSVGLHP 347 Query: 310 LPTFFGLVGGVRTMGLLGLF 329 + F L G G+ Sbjct: 348 VWLMFSLFAFSSLFGFTGML 367 >gi|302187851|ref|ZP_07264524.1| hypothetical protein Psyrps6_15958 [Pseudomonas syringae pv. syringae 642] Length = 357 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 132/343 (38%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAGFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 347 >gi|16799668|ref|NP_469936.1| hypothetical protein lin0593 [Listeria innocua Clip11262] gi|16413033|emb|CAC95825.1| lin0593 [Listeria innocua Clip11262] gi|313620258|gb|EFR91707.1| YubA [Listeria innocua FSL S4-378] gi|313624816|gb|EFR94748.1| YubA [Listeria innocua FSL J1-023] Length = 389 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 125/336 (37%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI KK + + + + ++ L I Sbjct: 37 IAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKKKWKR-GWAIALLYLVIIGLII 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L S ++ K ++ + Sbjct: 96 LLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSR---SSLFDQIKDKLSTNMSDIMK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I S G + + L+I+ + LF+ +DG + L + Sbjct: 153 TLSTKGTSVINSAITSIGSIVGTVT-EVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A+ +++ I S G I+++ G++L Y + G+P + L +I A +++P Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + I + + L + + + K + P ++G +K+ + F Sbjct: 272 YLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G+LG+ A++ V+ + K Sbjct: 332 ILVAGNLFGILGVIFAVPGYAVLKVVVTHVFIWFKR 367 >gi|325688460|gb|EGD30478.1| toxin secretion/phage lysis holin subfamily [Streptococcus sanguinis SK72] Length = 360 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 124/342 (36%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F + +A + + + ++ Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLGKCRVPQKLQRGLALILEVLILVL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A + I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQVVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G GL+G+ + A+I + +E ++ +E K Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|315281204|ref|ZP_07869881.1| YubA [Listeria marthii FSL S4-120] gi|313615146|gb|EFR88614.1| YubA [Listeria marthii FSL S4-120] Length = 389 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 133/364 (36%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFL--------------KGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y L K AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKHKWKR-GWAIALLYLVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S ++ K ++ + T + I S G + + L+I Sbjct: 128 DEFSR---SSLFDQIKDKLNTNMSDIMKTVSTKGTSVINSAISSIGSIVGTVT-EVILAI 183 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + LF+ +DG + L + A+ +++ I S G I+++ G+ Sbjct: 184 VTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGILGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|157693536|ref|YP_001487998.1| hypothetical protein BPUM_2783 [Bacillus pumilus SAFR-032] gi|157682294|gb|ABV63438.1| hypothetical membrane protein [Bacillus pumilus SAFR-032] Length = 380 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 123/333 (36%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + +K P++ ++ + PI + + + F ++ + ++ + V Sbjct: 42 FIFTPLIVLVKTIALPIILTGVVYYLLNPIVN-LLERFRVKRIFSILLLYIVIIGMITVT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + +M L + R L+ G K+++ S + Sbjct: 101 IVSIIPFLQAQMMSLFHNLPKYVDTVEDQIRQLT----GSNFITQAQKNMNFNVSELVSK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + T ++ F + +SI+ + LF+ +DG + + F Sbjct: 157 ASSQATKILESTFTGVGTFLGALTEIIISIVTVPFILFYLLKDGKKLPDYFLKFIPNKFR 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S LG I++ G++L Y + G+ + L +I A +++P Sbjct: 217 EHTHIVLHEMNHRLSSYILGQIIVSFCIGVLLLIGYLIIGLDYALLLAIIAACTSVVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIVIALVTSPVMLLKLIIVWTVVQLIEGKFISPQVMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++G+ + A++ VI K Sbjct: 337 TAGKLFSVVGIIVAIPTYAVLKVITTHLFDWFK 369 >gi|223984123|ref|ZP_03634275.1| hypothetical protein HOLDEFILI_01567 [Holdemania filiformis DSM 12042] gi|223963917|gb|EEF68277.1| hypothetical protein HOLDEFILI_01567 [Holdemania filiformis DSM 12042] Length = 382 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 130/336 (38%), Gaps = 1/336 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF-LAVIATVSVMCLFIVPLLFLFYY 84 L F A ++ + + +++K + + V +++ LF+V + F+ Sbjct: 46 ILLPFILGFSLAFLLAPVTARVEKKWLAKSKMKPSAKRKVGVAAAIVFLFVVLISFMAIL 105 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ +++ + + L++I G+ W + + + S + + Sbjct: 106 IPQLLESVMTLSTQLSDYLGKANTLLNEITEGLGFKTGWLEMVFSSSEALLESMLGMAKD 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + I ++ F ++ +++I + L R + +L ++S Sbjct: 166 YVPKILNYSWSFVRQTFNFFIAVIIAVYILLEKERFTEQFKKLAYALLPKPKVEALIQLS 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R+ ++ S +G I ++ G++ + +P V + I + MIP P Sbjct: 226 RLTSRMFNSFIIGKMIDSLIIGVICFIGMLIMRLPFAVLISFIVGLTNMIPVFGPFIGAV 285 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I++L + + ++ + L P ++G + LP L F ++ G G Sbjct: 286 PGIFILFIVDPIYSLIFAVFVLLLQQFDGNILGPMILGDQLGLPSLWVMFSIIVGGGMFG 345 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 +LG+F+G + A++ V+ + + + K S + Sbjct: 346 ILGMFLGVPVFAVLYVVVRGFVSGRLKEKNIRSDDM 381 >gi|7362948|emb|CAB83202.1| putative membrane protein [Gluconobacter oxydans] Length = 460 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 117/349 (33%), Gaps = 15/349 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +RE + + + + + SLYF P + AL++ + Sbjct: 44 LREHLNIRDMCVLILTILAVFYSLYFTAPILLPFVFALVLNLLMIAPMRFLTQRLHLPRH 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + + A Q P+ L+ + G + Sbjct: 104 LAGLMLIVMMFGIV-------GGIATTISVPAAGWITRAPQTLPPLQSKLALLSGPIDVV 156 Query: 121 E-----LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + L H S G + + R S + M++ LF Sbjct: 157 QRDYMRLSAMFSGHSGSTHTTHGVSGTMRGRNALSRLGSSVLAGTRELAGGFFSMLLMLF 216 Query: 176 FFYRDGFSISQQLDSLGE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F +G ++ ++ + + +++ + + + + +T++ +G GLV W Sbjct: 217 FLMTEGDTLLRRCVEIMPTYAKKRRLVEMATQIEQNVSLYLVTITMMNLGVGLVNMIQCW 276 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+P+ + GV+ ++ IP P+ + L ++ A + + Sbjct: 277 ATGMPNPLLWGVLAFLLNYIPIIGPLTGVVVYFVVGLFSFPSLLYALLPPSIYLLIHVLE 336 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P L+ L + L+ G+ G F+ ++A+ ++ Sbjct: 337 GETITPMLLARRFTLNPVFVMGSLLFWDWMWGISGAFLSVPMLAVFKIV 385 >gi|305682180|ref|ZP_07404984.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305658653|gb|EFM48156.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length = 472 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 121/335 (36%), Gaps = 21/335 (6%) Query: 17 MFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + II + + + + P++ A+I+ WP + K + A+IA + Sbjct: 43 LLIIAAAAFVIWHILSQVWRGGLPIVLAIIVCTVLWPPVAWL-RKHGIPAGLAAMIAILG 101 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 F + + + + + L + Q + WL P + S+L + + Sbjct: 102 SFGGFGFLIWLIAPSVVNQSQTLYFQAFEGVQR---LQLWLQGPPMNLDPSDLDDRIDTA 158 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q L+ + + I I ++++ +++ FFF +DG L Sbjct: 159 AQWLQSKAGS---------IASEVFSGLGIASSVMVTMLVVLVLTFFFLKDGDKFLPWLR 209 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + ++++ + + +GS + GVP +AL V+T Sbjct: 210 GMVGQRAGWHLTELLTRGWITLSGFIRAQALVSLVDAVFIGSGLIILGVPLALALAVLTF 269 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP +S+ + L+ + A + + + L P L + L Sbjct: 270 ITGFIPIVGAFIAGTLSVTVALVSLGVTEAVITLIIVLLVQQLEGNILSPLLQSKAVNLH 329 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G + G F+ A+ AV+++ Sbjct: 330 PVVVLISVTVGGSLFNIAGAFLAVPFAAMAAVLFR 364 >gi|310641211|ref|YP_003945969.1| sporulation integral membrane protein ytvi [Paenibacillus polymyxa SC2] gi|309246161|gb|ADO55728.1| Sporulation integral membrane protein YtvI [Paenibacillus polymyxa SC2] Length = 372 Score = 93.7 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 131/365 (35%), Gaps = 14/365 (3%) Query: 1 MRETMLNPQGIMRWMIMFII--LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M +LN W+++ I+ L+ +Y L P L A ++ + P+ +K Sbjct: 1 MSRLILNRILRALWVVIVIVALLLGIYVLFPLVYPFLFAWLVAYAMNPLVVFLHNKARMP 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGM 117 ++ + + L + E+ +L + W Sbjct: 61 RWAAVTVSLFVYLGGIAIILSAAITRMVREVIKLAMTFDGHIERFKSLFIDWTQSDLIQN 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSI-------I 168 E+ +P ++ KT + +F L+ S+ + Sbjct: 121 IIIEINHFIRDNPDYQHTINSNIDKTTQTVSSAVTTLVGQFFNGVLNLLTSLPNMGAVLM 180 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++++ FF +D + L + I + K + II L Sbjct: 181 VIVLSAFFISKDWDRHYRILSNTVPDTIRKPLSDIWHDLRKALYGYLRAQFIIISITALT 240 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + ++ V S +G++ ++ ++P G I +Y + GN+ L + AI Sbjct: 241 VIIGLFILRVESAFTIGLMIGLVDLLPYLGVGIVMIPWILYAYMSGNLALGVGLSILYAI 300 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L I + + P ++ + L LPT G+ G++ G LGL IGPV + ++ + + +++ Sbjct: 301 LL-IGRQIVEPKVLASSVGLNPLPTLIGMFIGLKLFGALGLIIGPVSLIVLDALNRANVI 359 Query: 348 AIKEN 352 N Sbjct: 360 QDLRN 364 >gi|147677394|ref|YP_001211609.1| permease [Pelotomaculum thermopropionicum SI] gi|146273491|dbj|BAF59240.1| predicted permease [Pelotomaculum thermopropionicum SI] Length = 349 Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 136/347 (39%), Gaps = 14/347 (4%) Query: 6 LNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I+ + +M ++ L YF++G + A I + P+ ++ + + A+ Sbjct: 10 RRRRSILFFAVMAVMAAGLFYFMRGLVFSFVLAAFITYLLNPLVNAIEKR--GAPRTSAI 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + +F+ + ++E ++++ +P + + + + Sbjct: 68 LMAYLALFIFVAGVFMYGMPRIIEQLNVLAET---------LPVYTGRAREIIDSIQARY 118 Query: 125 KHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L P ++ + + ++ + GI + + A + Y I+ + F+F +D Sbjct: 119 TGLGIPDGVRQIIDEWVSSLEGGIMHLLKEAVAALIGMAGYIFKILLAPVLAFYFLKDFD 178 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ + ++ R + KV+ S G ++A G + A + GV + Sbjct: 179 LIKRKITMFIPESYREEVFELFREIDKVLGSFIKGYILVAAMVGGLSAIAMAVLGVEFAL 238 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG+ + +IP P+ ++ L + + A + + + + + P ++G Sbjct: 239 MLGLFAGLTELIPYFGPVIGAVPAVGLAALKSKWLAVKVAIAFFVIHQLEGNIISPKILG 298 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L L F L+ G + GL G+ + A+ V+ + I Sbjct: 299 NKVGLHPLVIIFSLLAGEKLYGLTGMLLAVPAAAVFRVVLNYACRKI 345 >gi|323127491|gb|ADX24788.1| hypothetical protein SDE12394_06650 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 393 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 125/337 (37%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F P++ + I+ + + P+ I+ S T I ++ LF+ Sbjct: 43 ISFLFTPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPSRTTSIFIVFGLIILLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L++ + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYIGKVNEEANKLLENEWLVSYKPQLQDMLANTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSGKMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRMPMARVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYSITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G + L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVIIMAMVQGPLMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE ++ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVVKELFDWYQK 373 >gi|46906829|ref|YP_013218.1| hypothetical protein LMOf2365_0613 [Listeria monocytogenes str. 4b F2365] gi|47093325|ref|ZP_00231094.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|226223213|ref|YP_002757320.1| hypothetical protein Lm4b_00610 [Listeria monocytogenes Clip81459] gi|254824143|ref|ZP_05229144.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254853217|ref|ZP_05242565.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254932141|ref|ZP_05265500.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|254991724|ref|ZP_05273914.1| hypothetical protein LmonocytoFSL_00397 [Listeria monocytogenes FSL J2-064] gi|255520994|ref|ZP_05388231.1| hypothetical protein LmonocFSL_07186 [Listeria monocytogenes FSL J1-175] gi|300765351|ref|ZP_07075334.1| hypothetical protein LMHG_10257 [Listeria monocytogenes FSL N1-017] gi|46880095|gb|AAT03395.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018294|gb|EAL09058.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|225875675|emb|CAS04378.1| Conserved hypothetical membrane protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606571|gb|EEW19179.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293583697|gb|EFF95729.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593375|gb|EFG01136.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300513912|gb|EFK40976.1| hypothetical protein LMHG_10257 [Listeria monocytogenes FSL N1-017] gi|328467412|gb|EGF38488.1| hypothetical protein LM1816_09972 [Listeria monocytogenes 1816] gi|328475871|gb|EGF46607.1| hypothetical protein LM220_07432 [Listeria monocytogenes 220] Length = 390 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 124/336 (36%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI K + + + + ++ L I Sbjct: 37 IAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKR-GWAIALLYLVIIGLLI 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L S ++ K ++ + Sbjct: 96 LLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSR---SSLFDQIKDKLNTNMSDIMK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I S G + + L+I+ + LF+ +DG + L + Sbjct: 153 TLSTKGTSVINSAISSIGSIVGTVT-EVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A+ +++ I S G I+++ G++L Y + G+P + L +I A +++P Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + I + + L + + + K + P ++G +K+ + F Sbjct: 272 YLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G+LG+ A++ VI + K Sbjct: 332 ILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKR 367 >gi|307705142|ref|ZP_07642018.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307621303|gb|EFO00364.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 388 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNR-VIAITIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGISQV----IVALIIVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPIMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|89895168|ref|YP_518655.1| hypothetical protein DSY2422 [Desulfitobacterium hafniense Y51] gi|89334616|dbj|BAE84211.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 344 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 118/326 (36%), Gaps = 9/326 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + +P + A ++ + P+ + + + +S+ +F+ LL L + Sbjct: 26 RPILSPFMLAFVLAYLLAPVVEALVRRGVGRK--------ISIALVFVGILLSLALLIFI 77 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +L ++ +Q R L + A+ T S+ + ++ I Sbjct: 78 VIPKLYIELSKLSQVLPETVRTLELVIQDFRANFRATGLPHQVVSVLDEHLSEGESFLIH 137 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ F L I + + D + L W+++ + + Sbjct: 138 WLEEFLDNLPKALTSMSL-FILSPVIAIYLLADWQRLQAGFLRLVPQRKRVAWQRVVQDI 196 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++RS G I+A+ G++ G L G+ + +GVI + +IP P+ S+ Sbjct: 197 SHIVRSFIRGNVIVALIVGILTGVGVKLVGMDYALLIGVICGVFDLIPYFGPLIGAVPSV 256 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + + A + + I + + P L+G + L L F L+ G G G Sbjct: 257 LLGLIQSPMMALKVAIVILIVQQLESSIISPKLMGDSVGLHPLWIIFALLAGGEIAGFWG 316 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 + A++ VI + + + Sbjct: 317 MLFSVPFAAVLRVIIRHIYFWLVSPE 342 >gi|257867093|ref|ZP_05646746.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257873428|ref|ZP_05653081.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257801149|gb|EEV30079.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257807592|gb|EEV36414.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 393 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 109/319 (34%), Gaps = 5/319 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P K ++ ++ IV + + + E Sbjct: 58 PIILAGILYYLMNPTVDYLERK--GIKRIYSIFGLFILVVGLIVWGVVVIIPKIQEQSMS 115 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + I +++I S++ + + + L ++ I Sbjct: 116 FADNLPGYLTII--ENKVNEILSDPIFSQVQEQIEASNEKLISSLTDIVQNLSRSTIQNL 173 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S FG + L++I M LF+ +DG ++ + + + + Sbjct: 174 GSFFGAVAT-IVLAVITMPFILFYLLKDGRKLAPYFVKFLPTKMRQPSLVVLKEMNDQVS 232 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S G +A ++ + + G+ + LG+ + +IP +++L I Sbjct: 233 SYIRGQLTVAFAVAVMFMIGFSIIGLDYAITLGIAAGFLNLIPYLGSFLAMIPAVFLGIV 292 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G + + IE I + + P ++G + + + L+ + GL+G+ +G Sbjct: 293 GGPVLLIQVLIVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKLFGLVGVILGI 352 Query: 333 VLMALIAVIWKESIMAIKE 351 + A V+ Sbjct: 353 PVYAAAKVVITHVFEWYTR 371 >gi|290892784|ref|ZP_06555775.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290557596|gb|EFD91119.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 390 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 124/336 (36%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI K + + + + ++ L I Sbjct: 37 IAFIFDPLMVILKTIAAPIILAGISYYLFNPIIDWLEKHKWKR-GWAIALLYLVIIGLII 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L S ++ K ++ + Sbjct: 96 LLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSR---SSLFDQIKDKLNTNMSDIMK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I S G + + L+I+ + LF+ +DG + L + Sbjct: 153 TLSTKGTSVINSAISSIGSIVGTVT-EVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A+ +++ I S G I+++ G++L Y + G+P + L +I A +++P Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + I + + L + + + K + P ++G +K+ + F Sbjct: 272 YLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G+LG+ A++ VI + K Sbjct: 332 ILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKR 367 >gi|238792094|ref|ZP_04635730.1| permease perM [Yersinia intermedia ATCC 29909] gi|238728725|gb|EEQ20243.1| permease perM [Yersinia intermedia ATCC 29909] Length = 362 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 124/358 (34%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ + LYF G AP+L+A+++ + WP + + S Sbjct: 18 RRRFTDPQVIALLVILLVGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 75 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ Sbjct: 76 WAASIVLVIFGGITLLAVFVVAPTVWQQGNNLIS----------DMPKMLNKFNAFAQTL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + + + L + +I + + LFF Sbjct: 126 PSRYPALVDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLL 185 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 186 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVIVGIATYLVFFVMGM 244 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + + LF+ + + L Sbjct: 245 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGVGADFWTLFIAYLVVQGLDGNLL 304 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + Sbjct: 305 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAD 362 >gi|227824347|ref|ZP_03989179.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904846|gb|EEH90764.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 356 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 131/340 (38%), Gaps = 3/340 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + + + F PVL ++ + +PI + + V+V Sbjct: 10 LVKSAFALLAFTAFCLVADFLLPVLISIAFSYLLYPIVRTLEKITWGRDRRMPSA--VAV 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F++ LLF+ + M LV++V + +S + E ++ Sbjct: 68 LLSFVIFLLFMSAALQILMVPLVTQVNTLTKALPGFAAQVSATMNWFFGPEARAALPANV 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q+L + T N + S + S++ + F+F +D ++ Sbjct: 128 QALINEALTTAGRNVMALFQDLISSTFRVARSMA-SMVLVPFLTFYFLKDWRTLKAMAVK 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + A +K+ + ++ + M + + L ++ GV + LG++ + Sbjct: 187 VFPYDRQALAEKVLEDIGSMLCTYVDNMLKLCLVAAGCLTVGNYVLGVQYTLVLGLLAML 246 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP + T V++++ + A + ++ + + + + P LVG I L + Sbjct: 247 TELIPLVGSVVGTLVAVFVALLQRPALALQVLIFYLVYYQVDSQVIMPTLVGKAITLHPV 306 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G + G++GL ++A+I +++ + Sbjct: 307 LIILSVIIGGKLAGVIGLIFAVPVLAIIKILYGYFWHWGE 346 >gi|300780351|ref|ZP_07090207.1| permease [Corynebacterium genitalium ATCC 33030] gi|300534461|gb|EFK55520.1| permease [Corynebacterium genitalium ATCC 33030] Length = 506 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 106/322 (32%), Gaps = 17/322 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +R++++ I L+ + GF P+L ALI WP + K + I Sbjct: 77 ALRFIVVVIATAFLFKIIGFVWVGVLPLLLALIFCTVLWPPVRWLRNHKVPGA-LAVFIV 135 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + + EL + + I + S + Sbjct: 136 LLAFFGAIGGLFAAMAPTIKTQSVELYHQAEEG----------VQRILDWVETSAPFDVD 185 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + F++ + + G + ++ M++ FFF +DG Sbjct: 186 TSQIEQAISQAGDFVRGQASNIASGVVTGVGAVA-SIGTTLALMLVLTFFFLKDGDRFLP 244 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ + I+++ + + +G L GVP L V Sbjct: 245 WLRKYTGVKAGWHLTEVLMRSWNTLSGFIRTQAIVSLVDAIFIGLGLVLLGVPLAPVLAV 304 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT IP + A+++ + L+ G + A + + + L+P L + Sbjct: 305 ITFFGGFIPIIGAFTAGALAVVVALVSGGVTKALLVLALVILVQQLEGNVLQPVLQSQAM 364 Query: 306 KLPFLPTFFGLVGGVRTMGLLG 327 L + G G++G Sbjct: 365 GLHAAIVLLAVAVGGTVFGIIG 386 >gi|269926458|ref|YP_003323081.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] gi|269790118|gb|ACZ42259.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] Length = 438 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 116/347 (33%), Gaps = 17/347 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + I W+ + +IL L+ P + A++ + P+ S + Sbjct: 5 RFTKRAKEITIWISIAVILYFLHSTAHLLTPFIWAIVATYIFHPLVSFLSRESGVPRAIW 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ L+I + + + + + + + + + I Sbjct: 65 -------IILLYIAAFSAVAWSLINVVPIIRDQSLALANQVPYILNQIEGIINRNQMLRE 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + Q + L N D+ R A + +D + ++A FF Sbjct: 118 WGISVDLKQLESQVVA--LSDNFADYARRMAVPILTVVIDKAVKFFIFLVATFFLLLHAD 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L + + + R + + + I+ + V + Sbjct: 176 HIKSSLLEFTPAPYRHEIENLLRRINDTLGAYLRSQLILLAIMTIATWIFLSAIHVQYAL 235 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDK 294 LGV+T + +IP P + +++ + + N A + L I + D Sbjct: 236 LLGVLTGFLELIPIIGPYTAGGIAVSVALFQSNPPFGWSNFTLAAVVALGYFILRQLEDN 295 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + PFL+G + L + F ++ G G+LGL I + +++ +I Sbjct: 296 LVIPFLIGRVVHLNPIIVIFFIMAGASYGGILGLLIAVPIASVLRII 342 >gi|225870739|ref|YP_002746686.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225700143|emb|CAW94274.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 393 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + + P+ + K + T I V+ LF Sbjct: 43 ISFLFTPILSFLAIIMLPLVISTILYYLTKPLVD-MVEKLGPNRTASIFIVFGLVILLFF 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++ V + L + + L+ + Sbjct: 102 WAISGFIPMIQDQLRSFVEDLPKYVAKVNLEANKLLENEWLVSYRSNLQDMLTSMSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIMSPFILFYFLRDSGHMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI GL+ + L G+ + G+I + MIP Sbjct: 218 LRQPMARVLGEINKQLSGYVQGQVTVAIVVGLMFSVMFSLVGLNYSITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G + L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMGMVQGPLMLIKVLIIF-VIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKD 373 >gi|261405714|ref|YP_003241955.1| hypothetical protein GYMC10_1865 [Paenibacillus sp. Y412MC10] gi|261282177|gb|ACX64148.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 358 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 126/326 (38%), Gaps = 12/326 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV A + PI +K + S + V+ L+ V +G++ Sbjct: 41 IVPVAMAGFFYYLLRPIVDYLERRKIKRS--------IGVLMLYFVFAGLCAIFGIVVWP 92 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ + + + + + ++ W++++ L ++ I +I Sbjct: 93 TLREQIENFISNAPFLVEGVEEQIDQLQQNQFWSRYIPTESELSTSLTEYM-NRIITWIS 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + I + I L++ ++G + +L S+ + +++ + Sbjct: 152 NSINNLISVVSGVVVIIATIPIILYYMLKEGSKLPPRLLSVLPRRYRRDGQEVLGEIDTA 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + + +G I+ + +++ + + G+P + L VI+ + IP GA ++ V I Sbjct: 212 LSNFIIGKVILNLILSVMIYIGFLIIGLPYSLLLTVISFFLNFIPYIGALLATVPVVIIG 271 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 I+ + A + I I D L P + G + + L T ++ G GLLG+ Sbjct: 272 FIE-SPSIAIWSVVVIVIAQQIQDNILTPVIYGKQLDIHPLTTVVLILVGGDFFGLLGIL 330 Query: 330 IG-PVLMALIAVIWKESIMAIKENKE 354 + P M + + + + + E E Sbjct: 331 LAIPAYMIIKIIAVRIYELFLAEKVE 356 >gi|330508411|ref|YP_004384839.1| hypothetical protein MCON_2605 [Methanosaeta concilii GP-6] gi|328929219|gb|AEB69021.1| Domain of unknown function protein (DUF20) [Methanosaeta concilii GP-6] Length = 355 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 116/303 (38%), Gaps = 6/303 (1%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+Y+ F + + + ++ + V L + +L + ++E+ L S +++ Sbjct: 45 PLYALFF-RLTKKKQISSFLSIMLVFILILSLILGITSALLVELSYLQSSGAISDVEIDK 103 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID---FIPRFASRFGMIFLD 162 + + L+ + + R + FG Sbjct: 104 TINEIDAWSKSFIPAWLYNSIIEIALRYAQEISDIPIAFATWVFPILQRELTAFGSNLPI 163 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 +I ++ ++ DG Q L ++ + + + F + Sbjct: 164 LFAHLIVVVFFTYYLLIDGKVFIDQAVDLVPQEKQGIVRRFLDELYSIYHTLFTVYFSTS 223 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL 281 + G++ + L G+P +GV+ A+ ++P G P F +++Y LI G++F L Sbjct: 224 MLSGVMAAIGFSLLGIPYPFLMGVVVAVFTLLPLLGPPFVFIPIAVYYLIVGDLFRCLIL 283 Query: 282 FLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++G + L ++ + +RP L ++ + T + +G++G+ +GP L + Sbjct: 284 LVFGTVVLMVIPENVIRPHLAMMSSRIHPILTLLAYTAPIFVIGIIGVIVGPTLYGFLLA 343 Query: 341 IWK 343 +++ Sbjct: 344 VYR 346 >gi|193782537|ref|NP_435317.2| hypothetical protein SMa0136 [Sinorhizobium meliloti 1021] gi|307300731|ref|ZP_07580506.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307319142|ref|ZP_07598572.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|193072993|gb|AAK64729.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306895249|gb|EFN26005.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306904265|gb|EFN34850.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 670 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 113/334 (33%), Gaps = 16/334 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF + F P+ A+++ F P+ S ++ +AVI TV+ LF+ + Sbjct: 51 YFARDVFLPLAIAILLTFALAPLVSRL--RRVGCPRSVAVIGTVTTAFLFLSAFGVVIAM 108 Query: 85 GMLEMKE--------LVSKVVLANQHGI--PVPRWLSDIPG--GMWASELWTKHLSHPQS 132 + E+ + +V KV + G + + + S + + P+ Sbjct: 109 QVSEVAQNLPTYQYNIVEKVRTLKETGSESQILERIGRVIERISTEISRPEPEVRASPEP 168 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ L + +I+ + F + + + L Sbjct: 169 TPETKPLLVEIFSPQRPIETLKNIINPLLGPLATTGLVIVVVIFMLLEREELRDRFIRLV 228 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + + L ++ I G+ L L G+P+ V G++ ++ Sbjct: 229 GYGDLHRTTEALQDAGARVGRYLLMQLVVNITYGIPLAIGLSLLGIPNAVLWGMLAIVLR 288 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFL 310 +P P+ A+ ++L + ++ + + + + P+L G L L Sbjct: 289 FVPYIGPVIAAALPLFLAFAAAPGWSLLVWTAALFIVLELLSNNVVEPWLYGSRTGLSPL 348 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G +GL + L + V+ + Sbjct: 349 AIIVAAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 382 >gi|315221750|ref|ZP_07863664.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315189136|gb|EFU22837.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 392 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + L F+ PV+ A ++ + PI K I + + L I Sbjct: 42 ISFIFIPVLEFIGVIMLPVILAGLLYYLLNPIVDWMEKHKVNR-LVAITIVFILIALLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + + + + ++ Sbjct: 101 WGLAVAIPSLQHQIVSFVKNLPANLKKSNKIIQDFLENRISDDVKPQLEEIANNFSDQVT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ S + ++II M LF+ RDG ++ L Sbjct: 161 AWASNFSSKAVNWVSTLISTASQV----IVAIIIMPFILFYLLRDGKNLKSYLTKFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +I V + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 FREPVGQILTDVNTQLANYVRGQVTVAIIVAIMFILFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPIMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTAGSMFGIWGVLLGIPVYASAKVVIAAIFKWYKK 372 >gi|329922720|ref|ZP_08278272.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328942062|gb|EGG38345.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 358 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 122/325 (37%), Gaps = 10/325 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV A + PI +K + S + V+ L+ V +G++ Sbjct: 41 IVPVAMAGFFYYLLRPIVDYLERRKIKRS--------IGVLMLYFVFAGLCAIFGIVVWP 92 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ + + + + + ++ W++++ L ++ I +I Sbjct: 93 TLREQIENFISNAPFLVEGVEEQIDQLQQNQFWSRYIPTESELSTSLTEYM-NRIITWIS 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + I + I L++ ++G + +L S+ + +++ + Sbjct: 152 NSINNLISVVSGVVVIIATIPIILYYMLKEGSKLPPRLLSVLPRRYRRDGQEVLGEIDTA 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + +G I+ + +++ + + G+P + L VI+ + IP + T + + Sbjct: 212 LSNFIIGKVILNLILSVMIYIGFLIIGLPYSLLLTVISFFLNFIPYIGALLATIPVVIIG 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A + I I D L P + G + + L T ++ G GLLG+ + Sbjct: 272 FIESPSIAIWSVVVIVIAQQIQDNILTPVIYGKQLDIHPLTTVVLILVGGDFFGLLGILL 331 Query: 331 G-PVLMALIAVIWKESIMAIKENKE 354 P M + + + + + E E Sbjct: 332 AIPAYMIIKIIAVRIYELFLAEKVE 356 >gi|125717741|ref|YP_001034874.1| permease, putative [Streptococcus sanguinis SK36] gi|125497658|gb|ABN44324.1| Conserved permease, putative [Streptococcus sanguinis SK36] gi|325689947|gb|EGD31951.1| permease [Streptococcus sanguinis SK115] gi|328945949|gb|EGG40096.1| permease [Streptococcus sanguinis SK1087] Length = 392 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 122/337 (36%), Gaps = 8/337 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + +++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---KFIDDVVTKYISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F A + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIVVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRASFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + +E I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G+F+G A V ++ ++F Sbjct: 346 GIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|156932965|ref|YP_001436881.1| hypothetical protein ESA_00768 [Cronobacter sakazakii ATCC BAA-894] gi|156531219|gb|ABU76045.1| hypothetical protein ESA_00768 [Cronobacter sakazakii ATCC BAA-894] Length = 354 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 120/356 (33%), Gaps = 14/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I I+ L+FL G AP+L A+++ + WP + + S Sbjct: 10 RRRFSDPEAIALLAILVAGFCILFFLHGLLAPLLVAIVLAYLLEWPTSR--LQRIGCSRG 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V + + +V + + L+ + + + + +P A Sbjct: 68 LAATLVLVLFIGIVLVMAFVVVPVAWQQGINLIRDIPGMLNK---LSDFAATLPKRFPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++++ T D + +++ + L + +I + + +FF +D Sbjct: 125 MDAGIIDAIAENMRTRIITL-----GDSVVKYSLASLVGLLTLAIYLILVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + I + G + I G+ + + G+ Sbjct: 180 KEQLLNAVRRVLPRNRGLAGQVWVE-MNQQITNYIRGKVLEMIVVGVATWIGFLIFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ I +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGISVLIPYIGAFMVTIPVVCVALFQFGMGTEFWSCFAVYLIIQGLDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + +E Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGIFFAIPLATLIKAVVHAWPETTPTAQE 354 >gi|325068678|ref|ZP_08127351.1| hypothetical protein AoriK_12686 [Actinomyces oris K20] Length = 440 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 116/333 (34%), Gaps = 13/333 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFLAVIATVSVMC 72 +++ ++ + + F + AL+ P+ + F TFLA++ T+ + Sbjct: 99 IIVIGLVFYATSQVIPVFIGLFMALVFTSILQPMVNLFARIMPRYPATFLALLTTIGAI- 157 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L Y + + LA+Q G + + + G L + + H Sbjct: 158 ------AGLVTYVVASVTS--QWSSLASQFGDGLNTIMDFLEKGPL--HLTQQQIYHQLQ 207 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + + + +D + + FF G + + + Sbjct: 208 LWLRQGQHYLQSNAPSLASEVLSNASAVVDVLTVLALALFVTIFFLASGGRMWRWFLNEL 267 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + G ++A+ + ++ G LAG+P L V+ I A Sbjct: 268 PATMRESTHRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLAGIPLAAPLAVLVFIGA 327 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP GAP++ + L G + + A I L+P ++G + L + Sbjct: 328 FIPIIGAPLAMLVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIMGRQVSLHPVV 387 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G GLLG + L++++ ++ E Sbjct: 388 VIIGVALGTYAAGLLGAIVAVPLISVLWSVYSE 420 >gi|90419523|ref|ZP_01227433.1| putative permease [Aurantimonas manganoxydans SI85-9A1] gi|90336460|gb|EAS50201.1| putative permease [Aurantimonas manganoxydans SI85-9A1] Length = 386 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 113/334 (33%), Gaps = 19/334 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ Q + + + ++ L+ G P L ++I + P+ F + S Sbjct: 4 RSALIRRQVLFWSVAALVSILLLWVFSGILLPFLVGMVIAYFLDPVADWFERR-GFSRLM 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + F +L + ++ V ++ P +L + ++ Sbjct: 63 ATIVILILFVLFFAAAILVVVPVVGSQIASFVERI----------PDYLDRLQAIAVSAR 112 Query: 122 LWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFF 176 + F + + G + F +++ I + F+ Sbjct: 113 SGPLAFLFTGEEMNFKQDFAQFASEGTGIVTSFLGGLWSSSLAVVNFVSLFIVAPVVAFY 172 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + ++D+ ++++R + + + G + + G + G L Sbjct: 173 LLLDWDRMVDKIDAWTPRQHVDTVRRLAREIDRSVAGFVRGQGSVCLILGTIYGVGLTLT 232 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVD 293 G+ + +G+ +++ IP +++ + + + + + + + F Sbjct: 233 GLNFGLLIGLFAGLISFIPYVGSAIGLILALGVALVQFWPDWVSILMVAVVFFVGQFFEG 292 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+P LVG + L + F L G +G Sbjct: 293 NILQPKLVGASVGLHPVWLMFALFAFGALFGFVG 326 >gi|318057626|ref|ZP_07976349.1| integral membrane protein [Streptomyces sp. SA3_actG] Length = 443 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 106/307 (34%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ +++ L + V + A ++ + +++ + T+ Sbjct: 80 LLVLAATVWVLMKVISAVRLVVLAFVVALLITALLQPLVARLTRHGVPRGLATALTTLFG 139 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + +L S+V + + RWL D P + ++ Sbjct: 140 FLVMGLMGWFVVWQIMDNVDQLSSQVQDGIE---DLRRWLLDSPFHVTEKQI-------- 188 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + TN I ++ ++ + F DG I Sbjct: 189 NDIAKNLREAIGTNTDQLTSAGIEGV-TIIVEMFTGLLLAFFSTIFLLYDGQRIWGWFLK 247 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + S G I+A+ + + +G ++ VP V L VI + Sbjct: 248 LVPAAAREGVAGAGPRAWNTLTSYVRGTVIVALIDAVFIGIGIYVLEVPMAVPLAVIIFL 307 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P + A+++ + L+ ++ A + + I L+PF++G +++ Sbjct: 308 AAFVPLVGAVVSGALAVLVALVTQGVWAAIIVLGVVLLVQQIEGHVLQPFILGRAVRVHP 367 Query: 310 LPTFFGL 316 L + Sbjct: 368 LAVVLSV 374 >gi|313634086|gb|EFS00758.1| permease [Listeria seeligeri FSL N1-067] Length = 378 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 124/349 (35%), Gaps = 14/349 (4%) Query: 16 IMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++FI+L Y F P+L A + + P+ +K +I + Sbjct: 24 VVFILLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-ILSVIIIFI 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L ++ ++ L ++ EL + Q +WL + + L Sbjct: 83 AFIALIVLAIMQLGPTLADQVTELAKAIPGYWQ---DFEKWLQGLSNNSSLQGV---DLK 136 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +S + + +D + + + ++ + +F+ ++DG + Sbjct: 137 AELEKLNISLPKIMSVVVDGVASSFGAIVSFVSGFVMILVTVPFIVFYMFKDGHKFVESS 196 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K+I + + K I + I I G+ Y + G P + G+I Sbjct: 197 GKFFPAAIRTEAKQIIKEMNKTISTYISSQAIDCIVVGMFTFVGYLIIGQPYALLFGLIA 256 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +IP P A ++ + + + A + + I + L P+++G + + Sbjct: 257 GATNIIPYLGPFIGAAPAVIVALFTSPLQALLVIIVVTIVQQLDSNLLSPYIMGKSLSIH 316 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L L+ G+ G+ +G + A++ + IK + +++ Sbjct: 317 PLTIIIILIVAGNLAGIFGMILGVPVYAVVKTVIVNVNRLIKLRRNELA 365 >gi|302521655|ref|ZP_07273997.1| integral membrane protein [Streptomyces sp. SPB78] gi|302430550|gb|EFL02366.1| integral membrane protein [Streptomyces sp. SPB78] Length = 443 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 106/307 (34%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ +++ L + V + A ++ + +++ + T+ Sbjct: 80 LLVLAATVWVLMKVISAVRLVVLAFVVALLITALLQPLVARLTRHGVPRGLATALTTLFG 139 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + +L S+V + + RWL D P + ++ Sbjct: 140 FLVMGLMGWFVVWQIMDNVDQLSSQVQDGIE---DLRRWLLDSPFHVTEKQI-------- 188 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + TN I ++ ++ + F DG I Sbjct: 189 NDIAKNLREAIGTNTDQLTSAGIEGV-TIIVEMFTGLLLAFFSTIFLLYDGQRIWGWFLK 247 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + S G I+A+ + + +G ++ VP V L VI + Sbjct: 248 LVPAAAREGVAGAGPRAWNTLTSYVRGTVIVALIDAVFIGIGIYVLEVPMAVPLAVIIFL 307 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P + A+++ + L+ ++ A + + I L+PF++G +++ Sbjct: 308 AAFVPLVGAVVSGALAVLVALVTQGVWAAIIVLGVVLLVQQIEGHVLQPFILGRAVRVHP 367 Query: 310 LPTFFGL 316 L + Sbjct: 368 LAVVLSV 374 >gi|134298635|ref|YP_001112131.1| hypothetical protein Dred_0768 [Desulfotomaculum reducens MI-1] gi|134051335|gb|ABO49306.1| protein of unknown function UPF0118 [Desulfotomaculum reducens MI-1] Length = 343 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 124/327 (37%), Gaps = 9/327 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +IL LY ++G F P + A+++ + P+ + V+++ L+ Sbjct: 17 FLIGLILFFLYLIRGLFVPFILAIVLVYMLNPLVERMEKRGSPR--------VVAILILY 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + ++ M + +V+++ ++ + +I + + Q + Sbjct: 69 LGVVIVATSLLMYGVPRMVNQLEKMVENIPLYTDQVEEIVRNIQKRFADSSMPPGVQQIV 128 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++++ + I R + M L I + F+ +D I S+ Sbjct: 129 DERIRWVESRVLA-IVRKSMDLLMALLSNLFYIALAPVLAFYIMKDLKLIKNWTRSIVPK 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++R V V + G + + G++ A+ + G+ G+I I +I Sbjct: 188 ELVEDVFYLARKVDDVFSNFIRGHLTVVVIVGILSSLAFMVIGLEFAAMFGIIAGIAELI 247 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P+ A ++ + + + + + L I + + P ++G + L L Sbjct: 248 PYFGPLIGAAPAVGIALLHSKYMTLKVILAVLIIQQVEGNIISPKIMGNCMGLHPLVIIV 307 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ G G+ G+ + L A+I +I Sbjct: 308 ALLAGGHLFGIAGMLLAVPLAAIIKII 334 >gi|237815164|ref|ZP_04594162.1| ATP/GTP-binding protein [Brucella abortus str. 2308 A] gi|260883502|ref|ZP_05895116.1| permease [Brucella abortus bv. 9 str. C68] gi|297248081|ref|ZP_06931799.1| ATP/GTP-binding protein [Brucella abortus bv. 5 str. B3196] gi|237790001|gb|EEP64211.1| ATP/GTP-binding protein [Brucella abortus str. 2308 A] gi|260873030|gb|EEX80099.1| permease [Brucella abortus bv. 9 str. C68] gi|297175250|gb|EFH34597.1| ATP/GTP-binding protein [Brucella abortus bv. 5 str. B3196] Length = 658 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 114/328 (34%), Gaps = 24/328 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L F A + + + P+ K S +++ + Sbjct: 51 GAMAFFVLFLVVFSS-VLLPFVAGMA----LAYFLDPVADRLE-KVGLSRLAASIVILLI 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHL 127 + + I+ L+ + ++ + +S + P +++ + SE K++ Sbjct: 105 FLMILIIGLMIVVPILATQLADFISNL----------PGYITQLQSLLANRDSEWLKKYI 154 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + L G F+ G +D + + F+ D + Sbjct: 155 GIDSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRM 214 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +DS ++I+R + + G + + G L G+ + + Sbjct: 215 VNSIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLI 274 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLV 301 G +++ IP A++I + + + + + FI L+P LV Sbjct: 275 GFFAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLV 334 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 G + L + F L G G+ Sbjct: 335 GSSVGLHPVWLMFALFAFGSLFGFTGML 362 >gi|218291267|ref|ZP_03495243.1| protein of unknown function UPF0118 [Alicyclobacillus acidocaldarius LAA1] gi|218238815|gb|EED06027.1| protein of unknown function UPF0118 [Alicyclobacillus acidocaldarius LAA1] Length = 354 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 108/324 (33%), Gaps = 12/324 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F L++LII + P ++ S A + V + L + Sbjct: 36 VLSSLFYTFLASLIITYILQPAVDVLHRRRVPRSA-----AILIVYAVIAAILAVVVLNL 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++++ + +P +++ + +L + I + + Sbjct: 91 IPVISRQIAQLSSS------LPAITAELSRWIDMINSRKTYLPNAVRTGIENALNQLEHR 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ P L+ + +F+ +D +I + + + + + + R Sbjct: 145 VEVAPTGLFSVVTSTLNAIFMAFVVPFLVFYMLKDAKAIGRGMVRMAPAKYKHRVRLVLR 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTA 264 + + G +I + GL+ Y + +P + LG +IP PI Sbjct: 205 AIDDTLGGYVRGQFLIMLAVGLLSFIGYLIIRLPYALLLGAFLGFADIIPYLGPIIGIAP 264 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L + + + L P ++G + L + L+ G G Sbjct: 265 AVIIALTTSGWPMLVKVVIVNIAVQQVEGNILSPQIMGRTLHLHPMAIVAALIVGGEAGG 324 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 ++GL + +A+ V+W A Sbjct: 325 IVGLVLAVPALAVCKVVWMHWREA 348 >gi|225022952|ref|ZP_03712144.1| hypothetical protein CORMATOL_02998 [Corynebacterium matruchotii ATCC 33806] gi|224944175|gb|EEG25384.1| hypothetical protein CORMATOL_02998 [Corynebacterium matruchotii ATCC 33806] Length = 472 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 121/335 (36%), Gaps = 21/335 (6%) Query: 17 MFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + II + + + + P++ A+I+ WP + K + A+IA + Sbjct: 43 LLIIAAAAFVIWHILSQVWRGGLPIVLAIIVCTVLWPPVAWL-RKHGIPAGLAAMIAILG 101 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 F + + + + + L + Q + WL P + S+L + + Sbjct: 102 SFGGFGFLIWLIAPSVVNQSQTLYFQAFEGVQR---LQLWLQGPPMNLDPSDLDDRIDTA 158 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q L+ + + I I ++++ +++ FFF +DG L Sbjct: 159 AQWLQSKAGS---------IASEVFSGLGIASSVMVTMLVVLVLTFFFLKDGDKFLPWLR 209 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + ++++ + + +GS + GVP +AL V+T Sbjct: 210 GMVGQRAGWHLTELLTRGWITLSGFIRAQALVSLVDAVFIGSGLIILGVPLALALAVLTF 269 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP +S+ + L+ + A + + + L P L + L Sbjct: 270 ITGFIPIVGAFIAGTLSVTVALVSLGVTEAVITLIIVLLVQQLEGNILSPLLQSKAVNLH 329 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G + G F+ A+ AV+++ Sbjct: 330 PVVVLISVTVGGSLFNIAGAFLAVPFAAMAAVLFR 364 >gi|166711227|ref|ZP_02242434.1| permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 388 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 127/330 (38%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S ++ V LF++ L+ Sbjct: 25 VLWVISLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNAAVMLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIEALPQMRNWAIG-----TAIPWLEAKTGMQLMAWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGVAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERVAAVVPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 ++++ V+ G ++ + G + + + G+ + +G+I +++ IP Sbjct: 199 GTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIAGLISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|57641097|ref|YP_183575.1| hypothetical protein TK1162 [Thermococcus kodakarensis KOD1] gi|57159421|dbj|BAD85351.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus kodakarensis KOD1] Length = 330 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 118/314 (37%), Gaps = 29/314 (9%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A + +P++ K + + ++ + + +F F + ++K ++ Sbjct: 33 AATTAYILYPVHERLEGKIGGR---WSALTLTGILTVVSLLFVFGFALLINDVKYSLANY 89 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 V WL + A E+ + + + + Sbjct: 90 VDT------FVGWLLGLNLPPSAYEVLQR---------------ISLGISQRFNSYVLGY 128 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 L +I + + + + +I Q++ SL +K+ + + Sbjct: 129 TYSLPTLLLQVIVTVFSFYGILVNADAIKQEVYSLIPPTNRDLARKLIDSGAETLHIVLR 188 Query: 217 GMTIIAIGEGLVLGSAYWLAGVP---SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK 272 G ++ +G+G+++ + + G+ VA G++T ++ ++P G I + YL+ + Sbjct: 189 GWLLVGVGKGILMALFFRVFGISDVGGAVAAGILTVVIELLPVVGGWIVWVGGVAYLINQ 248 Query: 273 GNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+I + L + G + + D LR + + + + G +GG G +G+ IG Sbjct: 249 GHILSGVLLAVLGFSLVSPLPDILLRDKISRLKWGVNAIISLLGFIGGYIAFGFVGIIIG 308 Query: 332 PVLMALIAVIWKES 345 PV + L+ + +E Sbjct: 309 PVSLGLLKTLVEEW 322 >gi|304440319|ref|ZP_07400208.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371071|gb|EFM24688.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 415 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 137/350 (39%), Gaps = 7/350 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I LK F + A+I+ F P+ + K + +I + + + Sbjct: 66 LFIVLMIFNKYKILKDTFFSIFIAMILAFIINPLVTKLEGK-GIKRGYGVIIVYFAFLLI 124 Query: 74 FIVPLLFLFYYGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + + E+ +LV++ + + + + + L+ I G + ++ Sbjct: 125 LTVLIATVIPKTVQELTKLVAQAPATLDILSIKAEEISKSLAKIFEGKMFTGFNPSDMNL 184 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ LK + I + I L + + +++ ++F D I + Sbjct: 185 VETFGDKFLEILKKSQDLMISNLKNIATGISTVLYSFVKLFIVLVFSYYFVVDKDKIKSK 244 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + +S V + + G ++A+ G++ A + GV V +G+I Sbjct: 245 VVELIPEKYKRDVLFVSVRVNEALLGFVKGRLLMAVFVGILTMIALLIIGVDFAVIIGLI 304 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 T + +IP P +I + + A + + + L P L+G + L Sbjct: 305 TCVADIIPYIGPFLGFVPAILFALIESPMKAVWAGIIFLAIQWAENNILAPKLLGDRVGL 364 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L ++ G G+LG+ +G +++++ ++ + + E K +I+ Sbjct: 365 NPLVILLSIIIGGGMFGVLGMILGVPVVSIMMILIEFFKLKYNEKKAQIN 414 >gi|325694203|gb|EGD36119.1| permease [Streptococcus sanguinis SK150] Length = 392 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 122/337 (36%), Gaps = 8/337 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYY 84 FL PV+ A ++ + PI K +A+ ++ I+ L Sbjct: 52 FLGVIMLPVILAGLLYYLLNPIVDWMEKHKINR--LVAITIVFVLIAFLIIWGLAVAIPS 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ V V + +++ D+ +++ + + +L + +N Sbjct: 110 LQHQVMAFVRNVPAYLKQAD---KFIDDVVTKYISADFKPQIEEYTSNLSSQITDW-ASN 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +A ++II M LF+ RDG ++ + F A + ++ Sbjct: 166 FSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTKFRASFGQVM 225 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + + + G +AI L+ + + G+ V LGVI ++ ++P G+ ++ Sbjct: 226 TDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVPYLGSFLAML 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 LI G + + +E I + + P ++G + + + F L+ Sbjct: 286 PALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILFVLLTSGTMF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G+F+G A V ++ ++F Sbjct: 346 GIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|330718081|ref|ZP_08312681.1| integral membrane protein [Leuconostoc fallax KCTC 3537] Length = 342 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 115/325 (35%), Gaps = 16/325 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS----TFLAVIATVSVMCLFIVPLLFL 81 F+ F P++SA + + PI K + ++ + + + ++ L L Sbjct: 7 FISTVFVPIVSAGFLYYVLKPILGLIEKIKIKGKAIPHRLAVIMTFLLFIGVIVLALALL 66 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + + ++++++ W L + + Sbjct: 67 VPTLVKEISNLITALPAFVN---DLQKFVNELTAERWFRAL------DLNVNVDQIKGTV 117 Query: 142 KTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + AS G ++I+ + I LF+ DG + L Sbjct: 118 SKYAASVLTGTASTLGVVISTVTSVTINIVTIPIVLFYMLNDGDKLVPTLKKNFASRHAD 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++++ + + I G I + G+ + Y + G P L VI I ++P Sbjct: 178 NIEELTDKMDRTIERYISGQAIEMLFVGIAMAIGYLIIGQPYAWLLAVIAGITNIVPYIG 237 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + ++ + + I I + P ++G +K+ L L+ Sbjct: 238 PWLGVIPALVVASTQSMQQVIFVIIVMTIVQQIDGNFIYPNVIGKSLKIHPLTIMILLMV 297 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G++G+ + + A+I I K Sbjct: 298 AGNLWGIVGMILIVPVYAVIREIVK 322 >gi|220928624|ref|YP_002505533.1| hypothetical protein Ccel_1196 [Clostridium cellulolyticum H10] gi|219998952|gb|ACL75553.1| protein of unknown function UPF0118 [Clostridium cellulolyticum H10] Length = 349 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 130/353 (36%), Gaps = 19/353 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF--------FAPVLSALIIGFTSWPIYSSFISKKE 56 M+N + I+ ++I+ ++L+ + P A +I + +P+ F K Sbjct: 1 MINTRKIIFYIILVLLLIGTAVFVYYYIDKLIKILLPFFIAALIAYIIYPLVIRFERK-G 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPG 115 + ++ + I +++ + KEL + + + + +S I Sbjct: 60 IKRSVSIILVYFFIALTLIFFGVYIMPEVLNNGKELFKTLPSITSSYREYFNNCISRIKA 119 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 W E+ + + + + AS ++ L+II +I + Sbjct: 120 SKWPPEVKNLIFNEINYGSGFLQVYAARIIKKTLSVLASSLVIM-----LNIILSMIIAY 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +F +D ++ L R + + G + A+ G + +L Sbjct: 175 YFLKDAETLKNSALMLVPKKMRNDIINTGRELNAIATHFIQGQLMTALIVGTMETMGLYL 234 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V ALG++ + +IP G + L++ A ++ I + +D Sbjct: 235 VRVKYPFALGLLGGVANIIPYFGPFLGAIPAIAVALLQSPYKAALAALVF--IVVQQIDN 292 Query: 295 -TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ G + L + T ++ G G++G+ IG + A++ VI K+ + Sbjct: 293 AFISPKIIEGKLGLHPVTTIIAVLIGGEFFGIIGMLIGVPVTAMLKVILKKVV 345 >gi|114704853|ref|ZP_01437761.1| permease [Fulvimarina pelagi HTCC2506] gi|114539638|gb|EAU42758.1| permease [Fulvimarina pelagi HTCC2506] Length = 393 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 103/314 (32%), Gaps = 9/314 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 F+ ++ ++ P + ++I + P+ F + S + + + LFI Sbjct: 19 AFLFVLVIWLFADILLPFVLGMVIAYLLDPVADWFERR-GLSRLMATTVILILFVFLFIS 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L + ++ L ++ P + + L Sbjct: 78 AILIVVPVISSQVINLAERMPEYLDRLQGFAVAARSGPLAFLFTSEESTLEQDFAQLLSD 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S +F+ + + F+++ + + F+ D + +++D+ Sbjct: 138 STSFVTSFLSSLWSSSLA-----FVNFVSLFVVTPVVAFYLLLDWDRMVKKVDTWLPREH 192 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++I+R + + G + + G L G+ + +G+ +++ +P Sbjct: 193 QTTIRRIARDIDLSVAGFVRGQGSVCLILGSFYAVGLTLVGLNFGLLIGLFAGLISFVPY 252 Query: 257 GAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + +SI + + + + + F L+P LVG + L + Sbjct: 253 IGSLLGLVLSIGVALVQFWPDWPWIVAVAAVFFVGQFFEGNILQPKLVGASVGLHPVWLM 312 Query: 314 FGLVGGVRTMGLLG 327 F L G +G Sbjct: 313 FALFAFGALFGFVG 326 >gi|238788116|ref|ZP_04631911.1| permease perM [Yersinia frederiksenii ATCC 33641] gi|238723703|gb|EEQ15348.1| permease perM [Yersinia frederiksenii ATCC 33641] Length = 354 Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 122/353 (34%), Gaps = 18/353 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ + LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFADPQVIALLVILLVGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRVGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ Sbjct: 68 WAASIVLVVFASIMLLAVFVVAPTVWQQGNNLIS----------DMPKMLNKFNAFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + + + L + +I + + LFF Sbjct: 118 PARYPALVDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVVVGIATYLVFFVMGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + + LF+ + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGVGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P L + L L ++ G G+F L L+ + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|163942329|ref|YP_001647213.1| sporulation integral membrane protein YtvI [Bacillus weihenstephanensis KBAB4] gi|163864526|gb|ABY45585.1| Sporulation integral membrane protein YtvI [Bacillus weihenstephanensis KBAB4] Length = 372 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 130/351 (37%), Gaps = 16/351 (4%) Query: 11 IMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I+R M + + V +L ++ G P + A + P+ + K + +++ Sbjct: 9 ILRLMFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVS 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V + + +L + L+ V + + + + +L +K Sbjct: 69 LILVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKF 128 Query: 127 LSHPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + ++ G + I + F ++F+++A FF Sbjct: 129 NHLGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFF 188 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ ++ L + Y K I + K + + +++ + Sbjct: 189 ISYDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLIL 248 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + + +IT ++ ++P G F IY+ G+ A L + + + + + Sbjct: 249 RVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQI 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 308 MEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 358 >gi|330903708|gb|EGH34280.1| hypothetical protein PSYJA_37244 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 115 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 60/113 (53%) Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L Sbjct: 2 ALVLGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYL 61 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 62 ISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARP 114 >gi|217965322|ref|YP_002351000.1| membrane protein YubA [Listeria monocytogenes HCC23] gi|217334592|gb|ACK40386.1| membrane protein YubA [Listeria monocytogenes HCC23] gi|307570122|emb|CAR83301.1| conserved hypothetical protein [Listeria monocytogenes L99] Length = 390 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 124/336 (36%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI K + + + + ++ L I Sbjct: 37 IAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKR-GWAIALLYLVIIGLII 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L S ++ K ++ + Sbjct: 96 LLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSR---SSLFDQIKDKLNTNMSDIMK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I S G + + L+I+ + LF+ +DG + L + Sbjct: 153 TLSTKGTSVINSAISSIGSIVGTVT-EVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A+ +++ I S G I+++ G++L Y + G+P + L +I A +++P Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + I + + L + + + K + P ++G +K+ + F Sbjct: 272 YLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G+LG+ A++ VI + K Sbjct: 332 ILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKR 367 >gi|261408709|ref|YP_003244950.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|261285172|gb|ACX67143.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] Length = 372 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 128/368 (34%), Gaps = 20/368 (5%) Query: 1 MRETMLNPQGIMRWMI--MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M ML G W++ +F+I +Y L P L A II + P + Sbjct: 1 MERLMLKRLGRGVWVLSSIFVIAYLIYVLLPLLYPFLLAWIIAYAMNPCVNLLQRSLRMP 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + ++ L + E L++ N H WL+ Sbjct: 61 RWIAVTLSLLLYFGAALLILTAAVSRLVKE---LIALSQSFNLHIDAWVEWLTAWTQNES 117 Query: 119 ASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLS---------- 166 + + Q+ +T + T I + + L Sbjct: 118 FQNIVNEISRFYQNNPNYHDTINQNITRTTQTIGTAVTDLVTGIFNGILQIIYYLPNLGT 177 Query: 167 -IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I ++++ FF ++ L L + I + K + I+ Sbjct: 178 IFIVVLLSTFFLSNSWERHNRALLRLLPDVIRKPMNYIFSDLKKALFGFARAQLILISIT 237 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 +++ + GV S ++G++ ++ ++P G I S+Y + ++ L + Sbjct: 238 AVIVTITLYALGVDSAFSIGLLIGLVDLLPYLGVGIVLIPWSLYAFMSDDLTLGIGLTVL 297 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +I L +V + + P ++ + L L G+ G++ G+LGL IGPV + ++ + Sbjct: 298 YSIIL-VVRQIMEPKVLASSVGLDPLAALLGMFVGLKLFGILGLIIGPVSLVILDAFHRA 356 Query: 345 SIMAIKEN 352 + N Sbjct: 357 HVFKDLRN 364 >gi|20806564|ref|NP_621735.1| permease [Thermoanaerobacter tengcongensis MB4] gi|20515003|gb|AAM23339.1| predicted permease [Thermoanaerobacter tengcongensis MB4] Length = 354 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 127/349 (36%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L ++ + + + ++ + Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSL---AEISTNYANTINDIILNLVDRIRMY 122 Query: 121 EL-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + +++ + S + + + F ++ + ++A FF + Sbjct: 123 YISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 183 DKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIGFD 242 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++ I+ +P G+ ++Y +I N L + + + +V + + P Sbjct: 243 YPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVV-VVRQMIEP 301 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + GV+ G +GL IGPV + + + K I+ Sbjct: 302 KIVGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKALQKAEII 350 >gi|295397118|ref|ZP_06807227.1| possible permease [Aerococcus viridans ATCC 11563] gi|294974643|gb|EFG50361.1| possible permease [Aerococcus viridans ATCC 11563] Length = 353 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 130/347 (37%), Gaps = 12/347 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M+ M + + ++ + +V + + L+ P + AL++ + P + K + Sbjct: 1 MKIVMPEKKKLFDIGLVLLGIVIIAYIYNPLRNIINPFIYALVLAYLLNPA-VKLLEKNK 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + +I V + LF + L +++ + ++ + + L G Sbjct: 60 VNRIWAILIVFVLLFFLFSIAFATLIPRLTGDLRVFIDEIPNILKFIEKIVGELQS--GQ 117 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + L+ + RF S G L II I F+ Sbjct: 118 IPFIPEGVQEFLNLDEQIKNIGEVLRNSLRGVFNRFVSYTGT-----FLDIIITPIITFY 172 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +D I + + A K++ V KV+ G +A G++ G W+ Sbjct: 173 YLKDKDRIMKAITGEIPVKRLAKAKELGGEVDKVLGGFIKGQLTVAGFVGILTGMGCWII 232 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP + +G++ I +IP P + + L + A + + + + L Sbjct: 233 GVPYSLTIGLVAGITNIIPYFGPWIGGVLPVILAFMESPIMALWVTMLIVVIQQVESAFL 292 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++ + L L F ++ +G+LG+ IG LM L+ + + Sbjct: 293 SPQIMSHSVGLHPLLVIFSVLFFGNMLGILGMIIGVPLMGLLKIALR 339 >gi|297625082|ref|YP_003706516.1| hypothetical protein Trad_2875 [Truepera radiovictrix DSM 17093] gi|297166262|gb|ADI15973.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 437 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 124/369 (33%), Gaps = 26/369 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +++ + + YF + F + L I+ + P+ S + LA + Sbjct: 22 TVQLVLLIGVGFLLWYFYRTFSFALQTALIGFIVAYVLHPLVSGMRRLRIGR--GLATVI 79 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWT 124 + L IV L + E+ V+ + A P+ +S+ + E Sbjct: 80 VFFFLILLIVFGTVLLTSVVAELGRFVALIPGALDALGPLLARMSEFVLGWQERLPEFLA 139 Query: 125 KHLSHPQSLKILSETF-----------------LKTNGIDFIPRFASRFGMIFLDYCLSI 167 +++ + ++ P F + L Sbjct: 140 DRFGTGVDGVNIAQEVETRVLTLFDQATAGLVNVLQATLEQGPAFLLTGATGVVSTTLQA 199 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++A +F D I+ + +++ + + + G +IA+ G+ Sbjct: 200 FLILVASAYFLYDFPRITANFKRYVPVRYRPFYEDLGVKADRAVGGYLRGQLLIALVLGI 259 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ LAGVP +AL AI ++P G I ++ L F L + Sbjct: 260 MIYIGLSLAGVPLALALSFFAAIFNLVPYLGPVIGTIPAALLGLTTDTPFTTAILAVVVF 319 Query: 287 IELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + ++ L P ++ L + + G+ GL+G +ALI V+ +E Sbjct: 320 VIANQLEGNVLSPLILSKSTNLHPVTVLISITAGLGAFGLVGALFAVPTVALIKVLVEEY 379 Query: 346 IMAIKENKE 354 ++ E Sbjct: 380 VLRRPAYTE 388 >gi|256425309|ref|YP_003125962.1| hypothetical protein Cpin_6357 [Chitinophaga pinensis DSM 2588] gi|256040217|gb|ACU63761.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 363 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 130/346 (37%), Gaps = 16/346 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M MI+ ++++ L + K FF P+ A ++ P+ +K + Sbjct: 1 MIYRTKAINAAAILMILTLVVLILVYGKPFFVPIAFAGLLAMLLLPVSKWLCTKGINN-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + + LF+ L+ + + ++ ++ Q + + L W S Sbjct: 59 ---AVAILLSLLLFVGFLVLVVLFVSWQVSDIAENASQLEQQMMEKYQQLRG-----WLS 110 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + S FG D+ L ++++ + FF Sbjct: 111 TEYGISQEKQAQMLKEQQESSAGKASSVLTGIISGFGGFLTDFLLVLVYVFLFTFF---- 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + L H + + G+ ++ I ++ G + + GV + Sbjct: 167 RGRIKGFIVRLVPHSEKEKAVACMHKTQETAQQYLKGLLLMIIFLWVMYGIGFTIVGVKN 226 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++ ++ +IP ++ TA+++ L+ G++ T + + + FI L P Sbjct: 227 AFFFAILCGLLEIIPFVGNLTGTALTLLMSLVQGGDMTLVTGILITYGLVQFIQSYLLEP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +VG + + + T GLV G G+ G+ + LM ++ VI+ Sbjct: 287 LVVGSGVDINPMATIVGLVAGELLWGIPGMVMAIPLMGMMKVIFDH 332 >gi|58580922|ref|YP_199938.1| permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622857|ref|YP_450229.1| permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578098|ref|YP_001915027.1| permease [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425516|gb|AAW74553.1| permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366797|dbj|BAE67955.1| permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522550|gb|ACD60495.1| permease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 388 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 127/330 (38%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S ++ V LF++ L+ Sbjct: 25 VLWVISLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNAAVMLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIEALPQMRNWAIG-----TAIPWLEAKTGMQLMAWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + + SR G +++ +++ + I F+F RD + ++ ++ + Sbjct: 139 HWEQAGGVAKTLFGYVSRSGFAMVNWVINLALLPILAFYFLRDWDRLVERGAAVVPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 +++R V+ G ++ + G + + + G+ + +G+I +++ IP Sbjct: 199 GTVSRLARESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIAGLISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|228477392|ref|ZP_04062028.1| transport protein [Streptococcus salivarius SK126] gi|228250827|gb|EEK10015.1| transport protein [Streptococcus salivarius SK126] Length = 392 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 130/360 (36%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVL-------SALIIGFTSWPI---YSSF 51 +LN Q ++ + I+ +I +++ + F+PV+ L+I + + Sbjct: 18 ILNNQAVVAFFILLLIGLTVLIFTKISPIFSPVIQFMTIIMLPLVISMLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + + T ++ + L + + ++ L+ Sbjct: 78 VERTGLNRTMSILVIYAILGLLLVWGISTAIPSLQNQILILIRNAPSYIARANSETERWI 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++P LS + + ++ + ++ FAS + ++II Sbjct: 138 NLPILSNFHGDLESMLSDFSARMVNYAENFSSSALTWVGTFASTVARVT----VAIILAP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + S F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKMKHSFVSALPTRFRETTVRMLSDINSQLEGYVQGQVTVAIVVAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + M+P G+ ++ V I L++G + + IE Sbjct: 254 MFKIVGLRYGMTFGIMAGFLNMVPYLGSFLAMVPVVIMGLVQG-PAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ +E + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVIREIFDWYR 372 >gi|116618937|ref|YP_819308.1| permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097784|gb|ABJ62935.1| Predicted permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 369 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 122/336 (36%), Gaps = 10/336 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST----FLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + + +I V + + L+ L Sbjct: 40 FISTVFVPLIVAGSLYYVLKPVLTLLKKITVKGHKMPHQLAVIITFVLFLAVIAGSLILL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q+ V R+++D W S L +LS + Sbjct: 100 IPTLVAEITNLITALPEFAQN---VQRFVTDSLQSKWLSNL---NLSIDIDEVKSAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++++ + + LF+ DG + + L F K Sbjct: 154 SASFLTITAGTLGSAVSMVTSVTINVVTIPVVLFYMLSDGDRLLPAIQKLFPVRFADNVK 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + K I G + + G+ + Y + G P LGVI I ++P P Sbjct: 214 ELTLKMDKTIERYISGQALEMLFVGMTMAVGYLIIGEPYAWLLGVIAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + + + P ++G +++ L L+ Sbjct: 274 GVIPALIVASTQSWKQMLLVMIVMMVVQQLDGNFIYPNVIGKSLQIHPLTIMILLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G+ + + A+ + K +I + KE + Sbjct: 334 LWGIFGMILIVPMYAVARTVVKFAIEMRQLTKESLE 369 >gi|55823064|ref|YP_141505.1| hypothetical protein str1142 [Streptococcus thermophilus CNRZ1066] gi|55739049|gb|AAV62690.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 392 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 128/360 (35%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPI---YSSF 51 +LN Q ++ ++I+ +I +++ + F ++ L+I + + Sbjct: 18 ILNNQAVVSFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K T ++ + L + + ++ L+ Sbjct: 78 VEKIGLDRTMAILVIYAILALLLVWGISTAIPNLQDQILILLRNAPSYISRANSETERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +P LS + + T+ + +I FAS + ++II Sbjct: 138 KLPILSNFHGNLEAMLSDFSARMVNYAENFSTSALSWIGTFASTVARVT----VAIILTP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + S F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKLKHSFVSALPTRFRETTVRMLSDINNQLEGYVRGQVTVAIVIAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP G+ I+ V I L++G L ++ IE Sbjct: 254 MFKIVGLRYGMTFGILAGFLNMIPYLGSFIAMVPVVIMGLVQGPTMLIKVLIIF-VIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + VI K+ + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVIVKDIFDWYR 372 >gi|322411995|gb|EFY02903.1| hypothetical protein SDD27957_06325 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 393 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 125/337 (37%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F P++ + I+ + + P+ I+ S T I ++ LF+ Sbjct: 43 ISFLFTPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPSRTTSIFIVFGLIILLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L++ + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNNEANKLLENEWLVSYKPQLQDMLANTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSGKMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMARVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYSITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G + L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVIIMAMVQGPLMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE ++ Sbjct: 337 LLLTAGSMFGVWGVFLVIPIYASVKVVVKELFDWYQK 373 >gi|254481300|ref|ZP_05094545.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] gi|214038463|gb|EEB79125.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] Length = 360 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 125/346 (36%), Gaps = 15/346 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I V+LY L+ +P + +I + P+ S+ T I + + Sbjct: 19 IALAAVICVALYLLQPILSPFVLGGLIAYLGDPLVDRLESRGVGR-TLGVAIVFLLFSAI 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVL----ANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++F + ++ L+SKV Q +P + IP W+ L+ Sbjct: 78 ITLAIIFALPMLLHQLDALISKVPEIYRWLTQDALPWLQQRLAIPERRLPQVDWSGQLAD 137 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + R G L ++ + + F+ RD + + Sbjct: 138 NWQS-------VGKFTAQSLKRITGS-GANLLLSLANLALVPVVAFYLMRDWNLLLDKAL 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + +++ +V+ + G ++ G + + WL G+ + LG+I Sbjct: 190 GIVPLSWQQRTSELAGEADEVVGAFLRGQFLVMCALGAIYSAGLWLVGLQLAMLLGLIAG 249 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKL 307 + +++P + S+ L++ + L P LVG I L Sbjct: 250 LSSIVPYLGFMVGIVASLIAAYAQFNDWTMLLWVVLVFGVGQAVESMLLTPILVGDRIGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F L+ G + G +G+ + + A+I V + ++ + ++ Sbjct: 310 HPVAVIFVLMAGAQVAGFVGVVLALPVGAVIMVFLRHALQHYRSSE 355 >gi|330966589|gb|EGH66849.1| permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 357 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 129/334 (38%), Gaps = 14/334 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLIAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVAVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMTLLLVLVPMLAKQLFRLYELAPQILDWLQHSAMPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ G+ + + +++ + + F+ RD + ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASGLALIGWLTNLVLIPVVCFYLLRDWDLMMGKVRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQRESQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ +F I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIFAVFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G G+ + + A+I V+ + Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRH 338 >gi|284048848|ref|YP_003399187.1| protein of unknown function UPF0118 [Acidaminococcus fermentans DSM 20731] gi|283953069|gb|ADB47872.1| protein of unknown function UPF0118 [Acidaminococcus fermentans DSM 20731] Length = 356 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 127/349 (36%), Gaps = 5/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + + + Y L +F PV A+ + F +PI K + F +A + Sbjct: 12 VIKLLFGLLGFGAFYLLGHWFLPVFLAIGMSFLLYPIVDRLERLKIKGRAFPNTLAVLIA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF + L ++ + V+ ++ A + G A +L Sbjct: 72 FLLFGLFLYAAANVLIVPLVTQVNTLLKAMPGLAAKANESISLFLGSEAQKLPPNTRDML 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q T++ D + +S+ + F+F +D ++ + + Sbjct: 132 QQAGSSLSTYVMGLLKDMLASTVQAA-----KSLVSLALVPFLSFYFLKDWRTLKKMVVG 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + ++ + +++ + M + L + + GV + LG + I Sbjct: 187 LFAYEKQPLADRVLSDMGRILCAYVDNMFKLCFVAAACLTAGNSILGVQYTLVLGFLAMI 246 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP + T ++++ + A + + + + + + P L+G I L + Sbjct: 247 SELIPLVGSVVGTLSAVFIALLQKPSLALKVLVLYLVYYQVDAQVIMPNLMGHSITLHPV 306 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ G + G+ GL ++++I V++ A +E + N Sbjct: 307 LIILAVMVGGQIGGVAGLIFAVPVLSIIKVLYGYFWHAGEECPGSVDKN 355 >gi|293374565|ref|ZP_06620884.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325845421|ref|ZP_08168715.1| putative membrane protein [Turicibacter sp. HGF1] gi|292646814|gb|EFF64805.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325488553|gb|EGC90968.1| putative membrane protein [Turicibacter sp. HGF1] Length = 376 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 116/309 (37%), Gaps = 4/309 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P L A II + P+ + + + + L + + F+F Sbjct: 45 LSPFLLAFIIAYIFNPVMMFIEKRFKVKRNLSLSLTYFGFLLLCYLMISFIFPVIYHSAS 104 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE-TFLKTNGIDFI 149 +L+ ++ + W++ M + + Q L ++ + T + T+ I + Sbjct: 105 DLIKQIPSYATE---IQTWINGWTNQMSGFDFGELNEFKTQLLSMIPKVTEILTSSIGSL 161 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + L+ I I L + + + + Y + SR+ + Sbjct: 162 VSITYGAVTLTGNVLLAFIISIYILVEKEKFTEMSKKLIYIIFRPKNAGYILQTSRLFHE 221 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I +G +I +I G+ L G V LGVI + M+P PI T +++ + Sbjct: 222 NIGKYLIGKSIDSIFVGICATIGLALMGAKYAVLLGVIFGLTNMVPFVGPIFGTLIAVGI 281 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + N A ++ I + + P +VG + L T + G + MG++G+ Sbjct: 282 NLFYNPIVAIIALIFLLIVQQVESLIIDPKVVGQKMGLNPFFTLLAVTVGGKLMGIVGMI 341 Query: 330 IGPVLMALI 338 +G +M ++ Sbjct: 342 LGVPIMGVL 350 >gi|115379270|ref|ZP_01466383.1| permease [Stigmatella aurantiaca DW4/3-1] gi|310823540|ref|YP_003955898.1| hypothetical protein STAUR_6314 [Stigmatella aurantiaca DW4/3-1] gi|115363711|gb|EAU62833.1| permease [Stigmatella aurantiaca DW4/3-1] gi|309396612|gb|ADO74071.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 395 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 113/367 (30%), Gaps = 34/367 (9%) Query: 18 FIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 IIL L+ + P A +I + P+ + + +A + Sbjct: 17 LIILACLWVSIAGVLIAFRSVVMPFAGAALIAYLVQPLVARITRWRVAGRPVPRWVAILL 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVL-------------ANQHGIPVPRWLSD--IP 114 + LF V + F + ++ ++++ WL +P Sbjct: 77 IYALFFVGVYLFFIALVPQLYRELARISRDGLAFANSLTPEYVQSLAHRAEEWLGGYGLP 136 Query: 115 GGMWASEL-----------WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + L + L + T L + I + L Sbjct: 137 VALSNRALEGADPSPGGFGFEVDLGQLLKDAVERLTGLLQENLGNIVNVSKSIIAGVLAS 196 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + F+++ FF D +I + +L + A + + + + G I + Sbjct: 197 VFMLFFILMVAAFFSIDAHAILRYFSTLIPADYAADAALLLERIDRSLSGVVRGQVTICL 256 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G + + GV L I + ++IP I + + + + + L Sbjct: 257 VNGALTAIGLLVFGVKFAFLLATIATLFSLIPIFGTIISSVPIVLIALAEGFQKGLAILL 316 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 W + L P ++G ++ + F L+ G R GL+G + AL + Sbjct: 317 WIIGIHALEAYFLNPKIMGQAARIHPVIVAFSLIAGERLYGLVGALFAVPVAALFVACFD 376 Query: 344 ESIMAIK 350 + + + Sbjct: 377 YARLKAQ 383 >gi|119384045|ref|YP_915101.1| hypothetical protein Pden_1300 [Paracoccus denitrificans PD1222] gi|119373812|gb|ABL69405.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 434 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 111/326 (34%), Gaps = 16/326 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + + + P+ + S T VI T+ + L + L L + + Sbjct: 30 VTPFIMGAAVAYLFDPLADRLE-RLSLSRTAAVVILTLCGLLLVVALFLLLVPVLVRQTT 88 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ Q ++ P L++ + G + Sbjct: 89 ALIETAPEMLQQLQQFL--MTRFPEIFTEGNPVNTALTNMG-------QQISERGGQLVS 139 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 M + + I+ + + F+ D ++ +LD L +++ + Sbjct: 140 TVLGSV-MGVVSMVMLIVIVPVVAFYLLLDWDNMVDRLDDLLPREHAGTIRRLGHEIDAA 198 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPISFTAVS 266 + G ++ + G L G+P VA+GVI A ++ IP ++ V+ Sbjct: 199 LSGFVRGQGMVILILGTFYSVCLGLIGLPFGVAIGVIAASLSFIPYVGVVIGGVTAIGVA 258 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 ++ ++ + ++ I L+P +VGG + L + L G + Sbjct: 259 LFSFWGEPVWIGAVIAVF-VIGQVAEGNYLQPKIVGGHVGLHPVWLMLALTVFGTLFGFV 317 Query: 327 GLFIGPVLMALIAVIWKESIMAIKEN 352 GL I A + V+ + ++ KE+ Sbjct: 318 GLLIAVPAAAALGVLVRFAVARYKES 343 >gi|195978343|ref|YP_002123587.1| hypothetical protein Sez_1234 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975048|gb|ACG62574.1| hypothetical protein Sez_1234 [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 393 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + + P+ + K + T I V+ LF Sbjct: 43 ISFLFTPILSFLTIIMLPLVISTILYYLTKPLVD-MVEKLGPNRTASIFIVFGLVILLFF 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++ V + L + + L+ + Sbjct: 102 WAISGFIPMIQDQLRSFVEDLPKYVAKVNLEANKLLENEWLVSYRSNLQDMLTSMSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIMSPFILFYFLRDSGHMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI GL+ + L G+ + G+I + MIP Sbjct: 218 LRQPMARVLGEINKQLSGYVQGQVTVAIVVGLMFSVMFSLVGLNYSITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G + L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMGMVQGPLMLIKVLIIF-VIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKD 373 >gi|307701966|ref|ZP_07638974.1| transport protein [Streptococcus mitis NCTC 12261] gi|307616611|gb|EFN95800.1| transport protein [Streptococcus mitis NCTC 12261] Length = 388 Score = 92.6 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNR-VIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQV----IVALIIVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|227431381|ref|ZP_03913432.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352844|gb|EEJ43019.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 369 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 122/336 (36%), Gaps = 10/336 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST----FLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + + +I V + + L+ L Sbjct: 40 FISTVFVPLIVAGFLYYVLKPVLTLLKKITVKGHKIPHQLAVIITFVLFLAVIAGSLILL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q+ V R+++D W S L +LS + Sbjct: 100 IPTLVAEITNLITALPEFAQN---VQRFVTDSLQSKWLSNL---NLSIDIDEVKSAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++++ + + LF+ DG + + L F K Sbjct: 154 SASFLTITAGTLGSAVSMVTSVTINVVTIPVVLFYMLSDGDRLLPAIQKLFPVRFADNVK 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + K I G + + G+ + Y + G P LGVI I ++P P Sbjct: 214 ELTLKMDKTIERYISGQALEMLFVGMTMAVGYLIIGEPYAWLLGVIAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + + + P ++G +++ L L+ Sbjct: 274 GVIPALIVASTQSWKQMLLVMIVMMVVQQLDGNFIYPNVIGKSLQIHPLTIMILLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G+ + + A+ + K +I + KE + Sbjct: 334 LWGIFGMILIVPMYAVARTVVKFAIEMRQLTKESLE 369 >gi|228921575|ref|ZP_04084896.1| hypothetical protein bthur0011_25770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838092|gb|EEM83412.1| hypothetical protein bthur0011_25770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 264 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 95/247 (38%), Gaps = 1/247 (0%) Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 ++ ++ L T++ ++++ + +LK + + I A+ I + L + Sbjct: 17 YIQELSHHRLFEWLSTQNYVSIETIEKNAIEYLK-DIPNTITSSATALFGIITNVALVVF 75 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + LF+ ++DG + + SL + +I + + + + G ++ I G Sbjct: 76 TVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAF 135 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 Y + +P LG+I A +IP P A ++ + + + A + + I Sbjct: 136 TFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIV 195 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P ++ + + L ++G G++G+ + + A+ + + Sbjct: 196 QQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRL 255 Query: 349 IKENKEK 355 K + Sbjct: 256 FKTKRSN 262 >gi|297583809|ref|YP_003699589.1| hypothetical protein Bsel_1511 [Bacillus selenitireducens MLS10] gi|297142266|gb|ADH99023.1| protein of unknown function UPF0118 [Bacillus selenitireducens MLS10] Length = 367 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 113/311 (36%), Gaps = 4/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P L A ++ + P+ + K + +I + + + + + ++ Sbjct: 41 FLPFLLAGVLFYLLRPVVNLMERFKVPRVVSILLIYIAGIGLMTFI-VFLIGPTLQEQVM 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV + + V + + +I W + + + + DF+ Sbjct: 100 NLVDNAPMLFEE---VRKLIINIENNPWVQDQFQPSETFSIENLTENIADYMAAAFDFLG 156 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + F + L II + LFF +DG Q+ K+I + Sbjct: 157 NNIAGFIGAVTSFVLVIIVLPFILFFLLKDGDKAPDQVLRFLPEKQQVEGKRILSDMDSK 216 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G I+++ G ++ +Y + GV + L + + ++P P T ++ + Sbjct: 217 LSSYIQGQLIVSLFVGTLMYISYLIIGVDYSLILALFAMVTNVVPFVGPWIGTIPAVIVA 276 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + + I I + P ++G +K+ L ++ R GL+GL + Sbjct: 277 VIDSWVTMLWVIVAIVIVQQIESNLISPNVMGKKLKVHPLTIIVLILVAGRFGGLIGLIL 336 Query: 331 GPVLMALIAVI 341 L A+ V+ Sbjct: 337 AVPLYAVTKVV 347 >gi|332162580|ref|YP_004299157.1| hypothetical protein YE105_C2960 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606680|emb|CBY28178.1| putative permease PerM (=YfgO) [Yersinia enterocolitica subsp. palearctica Y11] gi|325666810|gb|ADZ43454.1| hypothetical protein YE105_C2960 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 354 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 124/358 (34%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ Sbjct: 68 WAASIVLVVFGGIALLAVFVVAPTVWQQGNNLLS----------DMPKMLNKFNAFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + +F+ + L + +I + + LFF Sbjct: 118 PARYPALVDAGIVDMMAENLRSKLSGMGESVVKFSLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVVVGVATYLVFFVLGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF+ + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAD 354 >gi|116872311|ref|YP_849092.1| hypothetical protein lwe0893 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741189|emb|CAK20311.1| putative membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 378 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 122/340 (35%), Gaps = 14/340 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + ++FI+L Y F P+L A + + P+ +K Sbjct: 17 EILAVVAVLFILLQMKYIFSPIGIIISTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-LL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ + L ++ ++ L ++ EL + Q +WL + S Sbjct: 76 SVILIFIAFIALIVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWLESL---SHNSA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + +S + + D + + + ++ + +F+ ++DG Sbjct: 130 LQSVDIKAELAKLNISLPKIMSVVFDGVASSFGAIFSFISGFVMILVTVPFIVFYMFKDG 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+I + + K I + I + GL Y + G P Sbjct: 190 HKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + G I +IP P A ++ + + + A + + I I L P+++ Sbjct: 250 LLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPLQALLVIVVVTIVQQIDSNLLSPYIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + + L L+ G+ G+ +G L A++ I Sbjct: 310 GKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 349 >gi|167462972|ref|ZP_02328061.1| hypothetical protein Plarl_10482 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 378 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 122/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + +K P++ A I + PI K ++I V+ + Sbjct: 40 ISFIFVPIGIIVKTVMLPLILAGIAFYLLNPIVDLLERHKINR--IYSIIGLFLVIIGVV 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + + + ++++ V ++G V ++ G + K + + Sbjct: 98 TILILTVFPFVKD--QVLNLVDNLPKYGQQVAEKFNEFAGTSLFHQFNDKLNNVSTDIMN 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + G + + L+I + LF+ +DG + + + ++ Sbjct: 156 YISEKSSVILQNAWASVSGVVGTVT-EIVLAIATLPFILFYLLKDGRKLPRFILNMLPVK 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + I S G I++ G +L Y + G+ + L +I ++ +++P Sbjct: 215 TREHTYQMMYEMHHQISSYIRGQIIVSFCIGFLLFVGYLVIGLNYALVLAIIASLTSIVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ +I + + L + I I K + P ++G + + + F Sbjct: 275 YLGPVIAITPAIIISAVTSPAMLVKLAVVWIIVQSIEGKFISPQVMGKNLSVHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G G+LG+ A++ VI Sbjct: 335 ILIGGNLFGILGIIFAVPGYAVLKVI 360 >gi|110634314|ref|YP_674522.1| hypothetical protein Meso_1964 [Mesorhizobium sp. BNC1] gi|110285298|gb|ABG63357.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 378 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 117/333 (35%), Gaps = 15/333 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I+++ LY P L+ +++ + PI + S V+ + + L ++ Sbjct: 28 AAILILFLYVFSSILLPFLAGMVLAYFLDPIADRLE-RVGLSRLAATVLILCAFIILLVI 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ + ++ + ++ L + + + +PQSL+ Sbjct: 87 ALMVIIPVLGNQLTDFTMRL-------PDYLTRLQALITNIDPGWFEERIGVNPQSLREG 139 Query: 137 SETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T L T G F+ G+ ++ + + F+ D + ++DS Sbjct: 140 LSTLL-TQGAGFVATLFKSIWSSGVALVNLVSLFVVTPVVAFYMLLDWDHMVSKVDSWVP 198 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++I+R + G I + G L G+ + +G +++ Sbjct: 199 RKQVETVRQIARDINTATAGFVRGQGTICLILGCFYAVGLTLVGLNFGLLIGFFAGLISF 258 Query: 254 IPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + A+SI + + + + + F+ L+P LVG + L + Sbjct: 259 IPFVGSLVGLALSIGVALVQFWPEWYWVLAVAVIFFAGQFVEGNILQPKLVGRSVGLHPV 318 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L G +GL I A IAV+ + Sbjct: 319 WLMFALYAFGFLFGFVGLLIAVPASAAIAVLVR 351 >gi|154490306|ref|ZP_02030567.1| hypothetical protein PARMER_00539 [Parabacteroides merdae ATCC 43184] gi|154088917|gb|EDN87961.1| hypothetical protein PARMER_00539 [Parabacteroides merdae ATCC 43184] Length = 382 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 119/342 (34%), Gaps = 15/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ + L+ P L A ++ + P F K + S L+++A + L I + Sbjct: 27 IIYLIAVLRNALLPFLIAWLLAYMMQPFVKFFQYKVKLKSRLLSILAVLVSTLLVISLVG 86 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + +++ + G IP + + + P L L Sbjct: 87 VVIVPSVTQEFNRTLELMQEHNSGY------GHIPMIPQSWAEYLEKNIDPDQLAQLLSK 140 Query: 140 FLKTNGIDFIPRFASRFGMIFLD--YCLSIIFMIIALF-FFYRDGFSISQQLDSLGEHLF 196 + I + ++I+F+I F F D I L + Sbjct: 141 ENIEKAVKQIAPKMWIVLTNTFSILFSITIVFVIFLYFIFILLDYERIVNGWIRLIPERY 200 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + ++ V + F G ++IA+ G++ + + G P V LG+ + +IP Sbjct: 201 RPFVQGLADDVEYSMNRYFRGQSLIALCVGILFAIGFKIVGFPLAVILGLFIGFLNLIPY 260 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWG------AIELFIVDKTLRPFLVGGPIKLPFL 310 I + + L+K ++G I I D L P ++G + L Sbjct: 261 MQTIGIIPMILLSLLKAAETGENFWLIFGSGILVLCIVQCIQDLYLTPRIMGKAMGLNPA 320 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L +G +GL I L L +K I+ ++ Sbjct: 321 IILLSLSIWGTLLGFIGLIIALPLTTLFLSYYKRFILMEEDQ 362 >gi|172058311|ref|YP_001814771.1| sporulation integral membrane protein YtvI [Exiguobacterium sibiricum 255-15] gi|171990832|gb|ACB61754.1| sporulation integral membrane protein YtvI [Exiguobacterium sibiricum 255-15] Length = 374 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 123/348 (35%), Gaps = 20/348 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +F + L F P + A ++ S P+ F + + + A+++ + + L Sbjct: 16 ILAIFFTGWLIIRLSSFMYPFVFAFLLALFSRPLVDFFQKRLRINRGWGALLSIILMSGL 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I L+ + + + + +++ Q + L + +W +SL Sbjct: 76 LIGSLVLIIMQLIRGLVFVANQLPAQIQELSLYFQKL----YNEKLAPIWNDASEALRSL 131 Query: 134 KILSETFLKTNGIDFIPRFASRFGMI--------------FLDYCLSIIFMIIALFFFYR 179 + + ++ + AS G L ++ +++A FF + Sbjct: 132 EPSQQNTVQNSIQSLGSSLASAIGEGSKSVAGMLQTVLATLPSIALILVIVLLAWFFISK 191 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D +L + A + + + + + ++ + GV Sbjct: 192 DWHRYELRLKKYEMLPWFARAESVVTSLRSALFGYIKAQLTLITITFFIVLIGLLIIGVE 251 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 A+ I A ++P G F Y +I G+ A L + AI + + + P Sbjct: 252 HPFAIAFIAAFFDILPYLGTGSVFLPWIAYSIITGDTGLAIGLAILYAIVI-LQRNIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +VG I + + L G++ G+ GL +GP++ +I + I Sbjct: 311 KIVGDNIGIQPITALIALFVGIQVFGVFGLILGPLIAVIIKALHNAQI 358 >gi|227432355|ref|ZP_03914347.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351876|gb|EEJ42110.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 390 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 109/325 (33%), Gaps = 7/325 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP++ + ++ + PI + + ++ + V + + ++ + Sbjct: 61 APIMISGVLYYLLSPIVGLLEKYVHLPRNLSIGVVLIVLLAIIGVVIAAIVMVLRNQVIQ 120 Query: 92 LV-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + + L + Q++ S+ +L + Sbjct: 121 FIDNWPNYWKTSETFINETFASEQFKFIRDYLNHTNSDLNQNVLDWSKKYLTSGVAGI-- 178 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S F I ++I+ L++ DG S + S + + + + K Sbjct: 179 ---SSFASILTSIGVTIVSTPFILYYMLLDGHKFSSFVSSKFPNNSQLSVRYLLTEISKQ 235 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G +A+ ++ Y + G+P + L ++ +IP G+ I+ V Sbjct: 236 IAQYIRGQLGVALAVMIMFSIGYTIIGLPYGILLALMAGFFNLIPYIGSIIAQVPVFTVA 295 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI G + AIE I + P ++G + + + L+ G+LG+ Sbjct: 296 LIAGGPKMLILAIIVLAIEQPIEAHVISPKILGEALSIHPVTVIVVLLSSGHIFGVLGIV 355 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 + A+ V + N + Sbjct: 356 LAVPSYAVAKVFVTHIYDWWRANSD 380 >gi|253577881|ref|ZP_04855153.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850199|gb|EES78157.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 485 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 117/361 (32%), Gaps = 23/361 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------------EESSTFLAVI 65 ++V + G AP++ +I+ + P+ + F K + Sbjct: 36 LIVGIKTFLGIMAPIIYGVILAYILSPLINLFEQKLIYPQLEKHNIKLQKKGKRAIRWGC 95 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 S+ +I+ L ++ ++S + + + +WL+ W +L + Sbjct: 96 VLFSMFLFWIIIYALLMMVLPQLIRSIMSIIYSFPYYVKVIEKWLNSFVEHGW--KLNPE 153 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGF 182 L + ++ +L T+ + + D + + + I + D Sbjct: 154 MLDMINQYSVKAQEYLTTDILPQMQDMLKNVSAGIFDILIFMKNFLIGAIVALYVLADKE 213 Query: 183 SISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + P W ++ R K G + + G++ L + Sbjct: 214 KFVAKSKMMVYAILPHKWANMLIRVMRFTDKTFGGFIYGKLLDSAIIGILCYFGMLLLDL 273 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + VI + +IP P I L++ + ++ + L P Sbjct: 274 PYPILISVIIGMTNVIPFFGPYIGAIPCILLILVVDPIKGLYFAIFILLLQQFDGNILGP 333 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++G L ++ G G+ G+ G + A++ + I +K+ + Sbjct: 334 KILGESTGLSSFMVIVAIMIGGGLFGVPGMIAGVPVFAVLYALIWRLINHSLNDKKMPAE 393 Query: 359 N 359 Sbjct: 394 E 394 >gi|312898878|ref|ZP_07758266.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620040|gb|EFQ03612.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 373 Score = 92.6 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 120/331 (36%), Gaps = 6/331 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIATVS 69 +R ++M + + +K + PV+ +LII F P+ I+ + Sbjct: 25 LRVVLMILGVCLFLAVKEIYWPVIVSLIITFILTPLRDGIQKGLVRLFRRQVPIDISILL 84 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I + + + L+ ++ L + + ++ + + + Sbjct: 85 SFVVLIAVIAVMTNSILK---PLIGQLNLLANNFSTIVSQTYELVVQLESDQAPIYIPDQ 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ + + GID I I + + F+F +DG + Sbjct: 142 VKAIVNEAFIKVSNYGIDGISNLVKSVFAIA-GTVVEFFVVPFITFYFLKDGERMMNAFV 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + + + + V+ G +++ + + W+ GVP + + ++ A Sbjct: 201 NLYPSDYRLHLRSYFEELSLVLSRYIRGQLLMSCIIACLTFTGMWIMGVPYPLVIALLAA 260 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I IP PI +I L + A + ++ A+ I + P ++G I + Sbjct: 261 ITEWIPVIGPIVGAIPAILLGATISPSLALKVLIFYAVVQQIDGHLIMPQVMGKVISIHP 320 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L+ G G+ G+ + L+A++ Sbjct: 321 VVIVIALLIGGTLFGVAGMILTVPLVAVLQT 351 >gi|225868326|ref|YP_002744274.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701602|emb|CAW98855.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 393 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 63/337 (18%), Positives = 126/337 (37%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + + P+ + K + T I V+ LF Sbjct: 43 ISFLFTPILSFLTIIMLPLVISTILYYLTKPLVD-MVEKLGPNRTASIFIVFGLVILLFF 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++ V + L + + L+ + Sbjct: 102 WAISGFIPMIQDQLRSFVEDLPKYVAKVNLEANKLLENEWLVSYRSNLQDMLTSMSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIMSPFILFYFLRDSGHMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + + G +AI GL+ + L G+ + G+I + MIP Sbjct: 218 LRQPMARVLGEINQQLSGYVQGQVTVAIVVGLMFSVMFSLVGLNYSITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G + L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMGMVQGPLMLIKVLIIF-VIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 337 LLLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKD 373 >gi|229135431|ref|ZP_04264218.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST196] gi|228647992|gb|EEL04040.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST196] Length = 365 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 130/351 (37%), Gaps = 16/351 (4%) Query: 11 IMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I+R M + + V +L ++ G P + A + P+ + K + +++ Sbjct: 2 ILRLMFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVS 61 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V + + +L + L+ V + + + + +L +K Sbjct: 62 LILVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKF 121 Query: 127 LSHPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + ++ G + I + F ++F+++A FF Sbjct: 122 NHLGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFF 181 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ ++ L + Y K I + K + + +++ + Sbjct: 182 ISYDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLIL 241 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + + +IT ++ ++P G F IY+ G+ A L + + + + + Sbjct: 242 RVPYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQI 300 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 301 MEPKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|310829305|ref|YP_003961662.1| possible permease [Eubacterium limosum KIST612] gi|308741039|gb|ADO38699.1| possible permease [Eubacterium limosum KIST612] Length = 355 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 116/343 (33%), Gaps = 13/343 (3%) Query: 14 WMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I + + L+ G F P A+I+ + P+ ++ + V V+ Sbjct: 18 VLICILFAIFLWPTFSGMFMPFFIAIILAYLLNPL-VKIFERRGFGRGLSVLFVCVIVLL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + + ++V+ + Q SE K+ S Sbjct: 77 ILFGVFMSFVPSLISNIAQMVTNIPSMLQDLQN---------YSGQISEFIQKYNDSDMS 127 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDY--CLSIIFMIIALFFFYRDGFSISQQLDS 190 E L F I + ++II + + F D +Q L Sbjct: 128 KYFNLEQSLSQVAGMFGGMLQGLSNAIIANSGQLMNIIIVPLVTIFLLLDKELFTQSLMY 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L KK+ + VI G +++I G++ G + G+P +GVI + Sbjct: 188 LVPIDARNQVKKMFYDIDMVIGGFIRGQGLMSIIAGILTGVGAYFMGLPYAPVIGVIAGV 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 MIP P V + + + + +W AI + L P L+ G + L + Sbjct: 248 TTMIPYFGPAVGMVVICIMALLSSPIQMVYILIWMAIVQVVCGNLLAPALMSGNVGLHPV 307 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F + G LG+ + +M + V+ K I +K Sbjct: 308 IIIFSIFFFGAMFGGLGMILAVPIMGTVKVVMKYLIAGFASSK 350 >gi|296128795|ref|YP_003636045.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296020610|gb|ADG73846.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 420 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 96/297 (32%), Gaps = 13/297 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ + + A A V ++ L L + + EL + Sbjct: 67 PVVRALQRYVRLPRSAAAGTALVGLIALVAGLLTLAGRSIVNGIAELWEQARSGFDE--- 123 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + WLS+ P + E+ +L Q S + A G+ Sbjct: 124 LLTWLSEGPLQLGTGEI-EDYLGQVQDAAASS--------GQQLVSGALSVGVTVGHVAA 174 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + FF DG I L L + R + + ++A + Sbjct: 175 GTLIALFCTLFFLIDGRGIWAWLVGLMPRGSRERVHQAGRRGWVTLGAYTRTQILVAAVD 234 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLW 284 + +G +P V L V+ + IP I ++++ + L+ +A + Sbjct: 235 AVGIGIGAAFLQLPLVVPLAVLVFFGSFIPFVGAIVTGSIAVLVALVTQGWVSALIMLGI 294 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + L+PFL+G + L + + G G++G L AL+ + Sbjct: 295 VLLVQQLEGHVLQPFLMGHAVSLHPVAVLLVVTTGSLVAGIVGALFAVPLAALVNTV 351 >gi|153009902|ref|YP_001371117.1| hypothetical protein Oant_2575 [Ochrobactrum anthropi ATCC 49188] gi|151561790|gb|ABS15288.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 415 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 110/332 (33%), Gaps = 19/332 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + + ++ L P ++ + + + P+ + S ++ Sbjct: 44 VRRQAMFWVGTVAVFVLFLIVFSSVLLPFVAGMALAYFLDPVADRLE-RFGLSRLTATIV 102 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELW 123 + + +V L+ + ++ + +SK+ P +++ + S+ Sbjct: 103 ILLIFLMALVVGLMIIVPILATQLADFISKI----------PDYITQLQSLLANEDSQWL 152 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 K++ S+ + + L G F+ G +D + + F+ D Sbjct: 153 KKYIGIDSSVIQQNLSSLLQQGAGFMSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLD 212 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +DS ++I+ + + G + + G L G+ Sbjct: 213 WDRMVSSIDSWVPRRQLHTVRRIAAEMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNF 272 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLR 297 + +G +++ IP A++I + + + + + F+ L+ Sbjct: 273 GLLIGFFAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMICAVAGVFFLGQFVEGNILQ 332 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 P LVG + L + F L G G+ Sbjct: 333 PKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 364 >gi|260909414|ref|ZP_05916122.1| membrane protein [Prevotella sp. oral taxon 472 str. F0295] gi|260636506|gb|EEX54488.1| membrane protein [Prevotella sp. oral taxon 472 str. F0295] Length = 371 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 136/369 (36%), Gaps = 23/369 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW I ++++++YF + P A ++ + +P+ Sbjct: 1 MLEEKITLDKLVRWTISGLLILAVYFVTNSMSEVLLPFFIACLLAYLLYPLVKFTEKYLH 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSD 112 L+++ V V+ + + L M+E + EL ++ + ++ + ++ + Sbjct: 61 IRIRALSILFVVLVLAGLLTGIGLLIVPSMIEQFDKISELAARYLGSSTPASDLSSYIQN 120 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 W E +S + + + + + C+++++M Sbjct: 121 -----WLREHQEDIDRFVRSKDFNETLRTTMPKLFNLLGQTASVVVSIVASCITLLYM-- 173 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 FF D +++ + +W ++++ + + + G ++++ G++ Sbjct: 174 --FFILLDYEFLTENWVRIFPKKHRPFWNELAQDASRELNNYIRGQGLVSLIMGIMFCIG 231 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P + LG++ +M ++P + + L+ G F L Sbjct: 232 FTIIDFPMAIGLGILIGVMNLVPYLHTFALIPTAFLALLKAGDTGQNFWVIFGMAILVFI 291 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D + P ++G + L L +G +GL I L LI W+ + Sbjct: 292 VVQIISDMVVTPRVMGKAMGLNPAIILLSLSVWGSLLGFIGLIIALPLTTLIMAYWQRYV 351 Query: 347 MAIKENKEK 355 + + E Sbjct: 352 TKEEVDDEP 360 >gi|229013801|ref|ZP_04170929.1| Sporulation integral membrane protein YtvI [Bacillus mycoides DSM 2048] gi|229169323|ref|ZP_04297033.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH621] gi|228614086|gb|EEK71201.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH621] gi|228747470|gb|EEL97345.1| Sporulation integral membrane protein YtvI [Bacillus mycoides DSM 2048] Length = 365 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 127/349 (36%), Gaps = 12/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + + +IT ++ ++P G F IY+ G+ A L + + + + + + Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIME 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 303 PKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|116490227|ref|YP_809771.1| permease [Oenococcus oeni PSU-1] gi|116090952|gb|ABJ56106.1| Predicted permease [Oenococcus oeni PSU-1] Length = 394 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 100/318 (31%), Gaps = 10/318 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F++ F P++ A + + P+ I + + I + Sbjct: 39 FIRTIFLPLIVAGFLYYLLHPVVVFLEKHFHFKHLLAVAITFFVFIVILISVFVIFVPQL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++ + + W W K L + + + K + Sbjct: 99 IAQISNMLGSLPKFVDDMRNMTD--------SWVKSKWFKQLYQDVKISNIQKQISKYSS 150 Query: 146 --IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 ++ + ++II + I LF+ DG ++ + Sbjct: 151 TFLEMSLSSLGNIASFLTTFTINIITIPIMLFYMLADGDKFIPFINRFIFPSRSKEVNDL 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + I G I I + Y + P LG+ + +IP P Sbjct: 211 AARMNNTISRYIDGQFIEGIFVMFFITGGYLIIRQPFAPLLGIFAGLCVLIPYLGPFISI 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 SI + + + + + I + + P ++G +K+ L L+ Sbjct: 271 IPSILIALTVSGQQVLAVLVVVLIVSQLDGNLIYPNVIGRNLKIHPLTIIIILLSAGNIW 330 Query: 324 GLLGLFIGPVLMALIAVI 341 GL+G+ +G + A++ + Sbjct: 331 GLIGIILGVPIYAVLRTL 348 >gi|116255449|ref|YP_771282.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115260097|emb|CAK03196.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 684 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 24/342 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +P + + + ++ LYF K P+ A+++ F PI S +K AVI Sbjct: 49 SPSRMPAFASVLAVIAILYFGKDVLLPLAIAVLLTFALAPISSRL--RKLGMPRIPAVIV 106 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV + L L+ + E+ + + I R L + T Sbjct: 107 TVVIAFLV---LVLFGLVVAGHVAEVAQNLPAYQGNIIAKIRSLQESGTDSGIVRRLTSV 163 Query: 127 LSHPQSLKILSETFLKTNGIDF----------------IPRFASRFGMIFLDYCLSIIFM 170 + +E G I S G L S+ + Sbjct: 164 VESVGRELSNAEERPAAPGTGSRPREPVLVEIFAPSRPIETLTSLIG-PLLGPIASLGLI 222 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I+ + F + + + L + + + + L ++ G+ L Sbjct: 223 IVVVIFMLLEREELRDRFIRLVGYGDLHRTTEAIQEAGSRVARYLLMQLVVNCAYGVPLA 282 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL- 289 W G+P+ G++ ++ +P P+ T + ++L + + L++ + Sbjct: 283 LGLWAVGIPNPALWGMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSLVLWVGAIFLVL 342 Query: 290 -FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + P+L G L L + G +GL + Sbjct: 343 ELTSNNVIEPWLYGSRTGLSPLAIIVAAIFWAWLWGPVGLVL 384 >gi|28868908|ref|NP_791527.1| permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213971899|ref|ZP_03399999.1| permease [Pseudomonas syringae pv. tomato T1] gi|301384469|ref|ZP_07232887.1| permease, putative [Pseudomonas syringae pv. tomato Max13] gi|302062184|ref|ZP_07253725.1| permease, putative [Pseudomonas syringae pv. tomato K40] gi|302131787|ref|ZP_07257777.1| permease, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852147|gb|AAO55222.1| permease, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213923324|gb|EEB56919.1| permease [Pseudomonas syringae pv. tomato T1] gi|330877083|gb|EGH11232.1| permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016799|gb|EGH96855.1| permease, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 357 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 128/334 (38%), Gaps = 14/334 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLIAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVAVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMTLLLVLVPMLAKQLFRLYELAPQILDWLQHSAMPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ G+ + + +++ + + F+ RD + ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASGLALIGWLTNLVLIPVVCFYLLRDWDLMMGKVRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQRESQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G G+ + + A+I V+ + Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRH 338 >gi|307709047|ref|ZP_07645507.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307620383|gb|EFN99499.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 388 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWLEKHKINR-VIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVINDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQV----IVALIIVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|239831547|ref|ZP_04679876.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239823814|gb|EEQ95382.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 413 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 103/305 (33%), Gaps = 19/305 (6%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P ++ + + + P+ + S V+ + + ++ L+ + ++ + Sbjct: 69 PFVAGMALAYFLDPVADRLE-RLGLSRLAATVVILLIFLMALVLGLMIVVPILATQLADF 127 Query: 93 VSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +SK+ P +++ + S+ K++ S+ + + L G F+ Sbjct: 128 ISKI----------PEYITQLQSLLANEDSQWLKKYIGIDSSVIQQNLSSLLQQGAGFLS 177 Query: 151 RFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 G +D + + F+ D + +DS ++I+R + Sbjct: 178 TLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVSSIDSWVPRRQLHTVRRIAREM 237 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G + + G L G+ + +G +++ IP A++I Sbjct: 238 NAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFFAGLISFIPYIGSFVGLALAI 297 Query: 268 YLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + F+ L+P LVG + L + F L G Sbjct: 298 GVALVQFWPDWIMICAVAGVFFLGQFVEGNILQPKLVGSSVGLHPVWLMFALFAFGSLFG 357 Query: 325 LLGLF 329 G+ Sbjct: 358 FTGML 362 >gi|298243575|ref|ZP_06967382.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297556629|gb|EFH90493.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 381 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 109/295 (36%), Gaps = 8/295 (2%) Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + +V L+ L + +L L + + + + G E + Sbjct: 82 IVAILVVYLIVLSAFSLLGYITLRATITQTHDLLRYMQSLTERHGGQPTQLERSLGNFGI 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ FL T G +F R A F FL++ + + + I + DG + Q L Sbjct: 142 TRAQINEGRQFLLTRGEEF-TRDAIPFLRSFLEFLIDTVIVAILSIYLLIDGTRVIQWLR 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVIT 248 A + + + +V+ G +A+ +++G ++ +P LG++ Sbjct: 201 RNTPQAARANF--LLDTLQRVVGGYIRGQFTLALLISVLVGLGMGFIFHLPYAFLLGILA 258 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IMA IP AV I + + + A + ++ I + + P +VG + L Sbjct: 259 FIMAFIPVLGTFISGAVCILIALTQSWVTALLVLVYFVFIHVIEGEVVGPRIVGKSVGLH 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI----AVIWKESIMAIKENKEKISSN 359 + + F LV G G+ G + ++ V+W E + + Sbjct: 319 PIVSLFALVAGGELFGIWGTLFASPIAGVLQTIIIVLWSEWRTRHPDQFAQTREQ 373 >gi|238763603|ref|ZP_04624564.1| permease perM [Yersinia kristensenii ATCC 33638] gi|238698235|gb|EEP90991.1| permease perM [Yersinia kristensenii ATCC 33638] Length = 354 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 123/358 (34%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ Sbjct: 68 WAASIVLVVFGGIALLAVFVVAPTVWQQGNNLMS----------DMPKMLNKFNAFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + + + L + +I + + LFF Sbjct: 118 PSRYPALVDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVVVGIATYLVFFVLGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF+ + + L Sbjct: 237 NYALLLSVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAD 354 >gi|251782671|ref|YP_002996974.1| hypothetical protein SDEG_1265 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391301|dbj|BAH81760.1| hypothetical membrane spanning protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 393 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 125/337 (37%), Gaps = 7/337 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F P++ + I+ + + P+ I+ S T I ++ LF+ Sbjct: 43 ISFLFTPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPSRTTSIFIVFGLIILLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L++ + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLANTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I ++II LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARIT----VAIIISPFILFYFLRDSGKMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRMPMARVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYSITFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ ++ V I +++G + L ++ IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVIIMAMVQGPLMLVKVLVIF-MIEQTIEGRFVAPLVLGNKLSIHPITIMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE ++ Sbjct: 337 LLLTAGSMFGVWGVFLVIPMYASVKVVVKELFDWYQK 373 >gi|302335911|ref|YP_003801118.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] gi|301319751|gb|ADK68238.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] Length = 476 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 86/233 (36%) Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 G + ++L + ++ ++ + M +++ ++ + Sbjct: 139 GSSKTSEVQQNLDQMVNAASNLGISASSDLLEKLSSGLMDNVMSLFSNTVTLFLGLVLGY 198 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +F +D I+++ + + ++ + + G+ I ++ +G++ + L Sbjct: 199 WFAKDYPRIAREFRIVAGPDHERSLSVMLCVMSRSMGGYMRGIVITSLLDGILSFVGFSL 258 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G P + + ++ +P P A++ L + A + I +VD Sbjct: 259 IGNPYAGLMATLAGVLHFVPVIGPWVSAAMATSLALFVGPLLAIETLMVAVIATNVVDNV 318 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P ++ +K+ + G++ G G LG+ + L A I ++ + Sbjct: 319 ISPLVMQSAVKVHPALSLLGIMVGSALGGTLGMILAIPLTAAIRSVFVYYFES 371 >gi|296119053|ref|ZP_06837625.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306] gi|295967888|gb|EFG81141.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306] Length = 416 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 115/336 (34%), Gaps = 18/336 (5%) Query: 13 RWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R++++ L FL F PV+ A+++ P+ S S K ++ + Sbjct: 48 RFIVIVAALAVAGFLLYFVWVGLLPVILAILLSSVLAPVTSKLRSWKFP-PALASISTLL 106 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + +L ++ + + D+P + A ++ Sbjct: 107 GLLLIIVGVFTAMGPVVSRQGSQLWTQAEEGIDKLLAMSE---DLPFNIDAEQI------ 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + +FL+ + I +++ M I FF +DG + Sbjct: 158 --DKLVQDATSFLQGQ-MSSIASGVISGASAASSVLVTVAVMFIISFFILKDGDRFLPWV 214 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ V K + +A + +G W GVP L VIT Sbjct: 215 RKYSGSTIGWHVTELFTRVWKTLAGFIQAQAAVAFVDAFFIGLGLWALGVPLAFVLAVIT 274 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP GA + + L+ + NA + I + L+P L + L Sbjct: 275 FFAGFIPIIGAVTAGVLAVVIALVSNGLVNALLVLALILIVQQVEGNVLQPVLQSKAMGL 334 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G++G F+ + A IA + + Sbjct: 335 HAAIVLLSVTVGSALAGIIGAFLAVPVAATIATVLR 370 >gi|315646087|ref|ZP_07899207.1| hypothetical protein PVOR_11660 [Paenibacillus vortex V453] gi|315278286|gb|EFU41602.1| hypothetical protein PVOR_11660 [Paenibacillus vortex V453] Length = 358 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 121/326 (37%), Gaps = 10/326 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV A + PI +K + S + V+ L+ V +G++ Sbjct: 41 IVPVAMAGFFYYLLRPIVDYLERQKIKRS--------IGVLMLYFVFAGLCAIFGIVVWP 92 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ + + + + + + W++ + L ++ I +I Sbjct: 93 TLREQMETFISNAPFLVEGVQEQIDQLQQNPYWSRFIPTESELTTSLTEYM-NRIITWIS 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + I + I L++ ++G + +L S+ F +++ + Sbjct: 152 NSINNLITVVSGVVVIIATIPIILYYMLKEGNKLPPRLLSVLPRRFRRDGQEVLGEMDSA 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + +G I+ + +++ + + G+P + L VI+ + IP + T + + Sbjct: 212 LSNFIIGKVILNLILSVLIYIGFLIIGLPYSLLLTVISFFLNFIPYIGALLATIPVVIVG 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 A + I I D L P + G + + L T ++ G GLLG+ + Sbjct: 272 FIEAPSIAIWSVVVIVIAQQIQDNILTPVIYGKQLDIHPLTTVVLILVGGDFFGLLGILL 331 Query: 331 G-PVLMALIAVIWKESIMAIKENKEK 355 P M + ++ + + + E E+ Sbjct: 332 AIPAYMIIKILVVRIYELFLAEKVEE 357 >gi|308176535|ref|YP_003915941.1| putative permease [Arthrobacter arilaitensis Re117] gi|307743998|emb|CBT74970.1| putative permease [Arthrobacter arilaitensis Re117] Length = 443 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 111/328 (33%), Gaps = 13/328 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ +L + PVL + ++ P+ ++ S+ I + L Sbjct: 61 LGVLVWALSKISLLVIPVLVSALLAGLLSPVVNAMNSRLAVPRGLAVGITLIGFFALVTA 120 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L ++ + + V WL + P + +L + L+ Sbjct: 121 GLSLAGQRLTAGFNALWTQALAGIEQ---VQNWLFNGPLKLTNDDLQSVLDDTLAQLRGN 177 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L S G I L I AL F DG I L +L Sbjct: 178 ATNILSEAISW-----TSAIGQILTGTLL----AIFALIFLLLDGRKIGLFLINLLPRRA 228 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + S ++A+ + + +G + GVP + LGV+ I + IP Sbjct: 229 RPAMDGALTRGWASLVSYVRVQMVVAMIDAIGIGLGAFFLGVPLAMPLGVLVFIGSFIPI 288 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA I+ + L+ NA + + L+P ++G + L L Sbjct: 289 VGALITGALAVLLALVANGWINALIMLAVVLLVQQAESNILQPLIMGKAVSLHPLAVVLA 348 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + GG G+ G L+A++ + + Sbjct: 349 VAGGTMLAGIPGALFAVPLLAVLNAVIR 376 >gi|123441475|ref|YP_001005461.1| hypothetical protein YE1133 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088436|emb|CAL11228.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 354 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 123/358 (34%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A + V + ++ + + + L+S +P+ L+ Sbjct: 68 WAASLVLVVFGGIALLAVFVVAPTVWQQGNHLIS----------DMPKMLNKFNAFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + + + L + +I + + LFF Sbjct: 118 PARYPALVDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVVVGIATYLVFFVMGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF+ + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAD 354 >gi|256003346|ref|ZP_05428337.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|255992636|gb|EEU02727.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|316940232|gb|ADU74266.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 1313] Length = 360 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 4/316 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L +FAP L A I P+ + K + F A+++ + + + + LL LF Sbjct: 28 LAIYFAPFLIAFAISSMIEPVVRFLMKKLKFRRKFAALVSLLLGLSMIAILLLMLFSKLY 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ L S + L I G+ ++ S + S + ++ + Sbjct: 88 NEITSLSSSQPEFWKEAYQNISNL--INRGLNIYFGLPSEVTAQISNMVSSLSNSVSSLV 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + + + I I++ +F D I + I Sbjct: 146 DSFVKGIYNTAISIPQMVIFIFVTILSTYFISSDRDRIYDYIKDNVPDALLNKIIDIKDS 205 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 + + I+ L + + GV + LG++ + + P G Sbjct: 206 MFTALFGYVKAQLILMTITFCELSLGFTIIGVKRPILLGLVISFIDAFPVLGTGGVLVPW 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY + +I L + I L ++ + + P +VG I L L T + G++ GL Sbjct: 266 AIYEFLTKDIRMGVSLLILYVIVL-VIRQMIEPKVVGEQIGLHPLMTLITMYLGMKFFGL 324 Query: 326 LGLFIGPVLMALIAVI 341 GL +GP++ + I Sbjct: 325 PGLILGPIVTLIFKNI 340 >gi|328955593|ref|YP_004372926.1| protein of unknown function UPF0118 [Coriobacterium glomerans PW2] gi|328455917|gb|AEB07111.1| protein of unknown function UPF0118 [Coriobacterium glomerans PW2] Length = 458 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 121/333 (36%), Gaps = 10/333 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I ++ L L + ++ F + P + +K A+I + + + Sbjct: 35 IVIAVAVMRVLGVLAAVVEFLAVGSLVAFIASP-MVRALERKGVPRGIGALIGLLVIAAV 93 Query: 74 FIVPLLFLFYYGMLEMKELVS----KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 I + L + E+++ ++ + + V + + WAS+L S Sbjct: 94 VICIGVVLVPVFAQQSLEILTRLPEQLRSLGEWVVSVSQEFRSLSQSAWASQLDMALSSL 153 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 G P ++ +F+ ++ ++ RD I +++ Sbjct: 154 ADVASSYMRQVASDVGEGVFPFISAFAWQLFI-----FFLGLVLAYWLARDYPRIHREIG 208 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + I+ + + GM I ++ G++ + + + G P + V+ A Sbjct: 209 ILVGERHELNYHFMIAIIARSVGGYMRGMVITSLINGVLAYAGFLIIGHPYAALMAVLAA 268 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P P +++ + + + A + + I D + P ++ +++ Sbjct: 269 LFHLVPVVGPWVSCSIATLIAVFYSPALAAWTLVVAVVSQNITDNVISPKIMQSAVQVHP 328 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +V G MG LG+ I L A + ++ Sbjct: 329 AMSLTAIVAGSALMGALGMVIAIPLCAALKGLF 361 >gi|229062280|ref|ZP_04199601.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH603] gi|228717008|gb|EEL68689.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH603] Length = 365 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 127/349 (36%), Gaps = 12/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVSFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAHKVRKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + + +IT ++ ++P G F IY+ G+ A L + + + + + + Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIME 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 303 PKVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|312278450|gb|ADQ63107.1| Predicted membrane protein of the putative permease (PerM) family [Streptococcus thermophilus ND03] Length = 392 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 128/360 (35%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPI---YSSF 51 +LN Q ++ ++I+ +I +++ + F ++ L+I + + Sbjct: 18 ILNNQAVVSFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K T ++ + L + + ++ L+ Sbjct: 78 VEKIGLDRTMAILVIYAILALLLVWGISTAIPNLQDQILILLRNAPSYISRANSETERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +P LS + + T+ + +I FAS + ++II Sbjct: 138 KLPILSNFHGNLEAMLSDFSARMVNYAENFSTSALSWIGTFASTVARVT----VAIILTP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + S F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKLKHSFVSALPTRFRETTVRMLSDINNQLECYVRGQVTVAIIIAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP G+ I+ V I L++G L ++ IE Sbjct: 254 MFKIVGLRYGMTFGILAGFLNMIPYLGSFIAMVPVVIMGLVQGPTMLIKVLIIF-VIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + VI K+ + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVIVKDIFDWYR 372 >gi|308068357|ref|YP_003869962.1| Predicted permease [Paenibacillus polymyxa E681] gi|305857636|gb|ADM69424.1| Predicted permease [Paenibacillus polymyxa E681] Length = 372 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 128/350 (36%), Gaps = 12/350 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ +L+S+Y L P L A ++ + P+ +K ++ + Sbjct: 16 AIVIVALLLSIYALFPLIYPFLFAWLVAYAMNPLVGFLRNKARMPRWTAVTVSLFVYLGG 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + L + E+ +L + W E+ +P Sbjct: 76 IAIILSAAITRMVREVIKLAMTFDGHIERFKSLFIDWTQSDLIQNVIIEINHFIRDNPDY 135 Query: 133 LKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFS 183 ++ KT + ++F L+ S+ + +++A FF +D Sbjct: 136 QHTINSNIDKTTQTVSSAVTTLVAQFFNGVLNLLTSLPNMGAVLMVIVLAAFFISKDWDR 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 S+ L + I + K + II L + ++ V S Sbjct: 196 HSRMLSNTIPDTIRKPLSDIWHDLRKALYGYLRAQFIIISITALTVIVGLFILRVESAFT 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G++ ++ ++P G I +Y + GN+ L + I L I + + P ++ Sbjct: 256 IGLMIGLVDLLPYLGVGIVMIPWILYAYMSGNLALGVGLSI-LYIILLIGRQIVEPKVLA 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L LPT G+ G++ G+LGL IGPV + ++ + + +++ N Sbjct: 315 SSVGLNPLPTLIGMFIGLKLFGVLGLIIGPVSLIVVDALNRANVIQDLRN 364 >gi|324992095|gb|EGC24017.1| permease [Streptococcus sanguinis SK405] gi|324994189|gb|EGC26103.1| permease [Streptococcus sanguinis SK678] gi|327490609|gb|EGF22390.1| permease [Streptococcus sanguinis SK1058] Length = 365 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 125/351 (35%), Gaps = 9/351 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I L L F+P++ ++ F E+ + ++ Sbjct: 16 IALALVLYIGNIWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLEKCRVPQKLQRSL 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ ++ +L + + + L + V ++ V ++ Sbjct: 76 ALVLEVLILVLIMTGIVSIVVPTLTTAVNQLSETIGKVAPQVAKW----LQQSGLLSSSQ 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 K L + + I + IF ++ S+I I +F F + Sbjct: 132 LKDLTKQLQNSDIVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTIT 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + L P K V VI T +G I A+ G+++ AY L G+P Sbjct: 191 SRLLQVLLPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALT 250 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ +++ IP P S A+ + + + A I + P +VG Sbjct: 251 GVLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQS 310 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + LP L T + G GL+G+ + A+I + +E ++ +E E Sbjct: 311 VGLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEERNES 361 >gi|319892377|ref|YP_004149252.1| UPF0118 membrane protein YrrI [Staphylococcus pseudintermedius HKU10-03] gi|317162073|gb|ADV05616.1| UPF0118 membrane protein YrrI [Staphylococcus pseudintermedius HKU10-03] Length = 400 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 119/318 (37%), Gaps = 9/318 (2%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + P+ + + + + + I + ++ + + + L + L+ Sbjct: 77 YLFNPVIN-LMERYNINRIWGITILFLGIIGMITIAVNLLIPIVSFQFDRLMDNFPNYLN 135 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + IP + S+ +++ L+ TF D + F + Sbjct: 136 KLTSFANNMMHIP---FLSDYYSQIEKAVTGLQEKIPTF-----ADGLSSKIRVFAEAVV 187 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + + II + LFF +DG + + + F + + + + S G I+ Sbjct: 188 NITVVIITVPFVLFFMLKDGHRFKEFSNKIVPPKFRKDVHDLLDKMSEQVGSYIQGQIIV 247 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 + G++L Y + G+ + L I A+ +++P P + +I + I + F L Sbjct: 248 SFCIGILLFIGYSIIGLDYALILASIAAVTSVVPYLGPTIAISPAIIISIITSPFMLIKL 307 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + FI + P ++G +K+ L F L+ +G++G+ +G A++ V+ Sbjct: 308 IVVWTAVQFIEGHFISPNIMGKTLKIHPLTIIFVLLSAGNLLGVVGVILGIPSYAILKVL 367 Query: 342 WKESIMAIKENKEKISSN 359 + K K ++ Sbjct: 368 VSHIFLLFKRRYNKYYAD 385 >gi|116492395|ref|YP_804130.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116102545|gb|ABJ67688.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 376 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 118/337 (35%), Gaps = 8/337 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A + + P+ + + +A V V LFI +++ Sbjct: 40 FISTVFMPIILATFLYYMLNPLVKLLTKVRYKKFKIPRTLAIVIVFVLFITLIVWGISSF 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + L+ +V + + + L + K P I SE + Sbjct: 100 ---LPNLIDQVSQMLGNLPYIVKRLQKTVPQLLEHSWLKKIDFAPFIKNINSE--IGKYA 154 Query: 146 IDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F+ A G + + +I + I LF+ +DG+ + + + H Sbjct: 155 EGFLAGTALHIGNLISTLTNATVVVITVPIILFYMLKDGYKLIPTVAQVVPHRNRKNVVD 214 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + S G I + G Y + P + LGVI I +IP P Sbjct: 215 LFNTMSDTLSSYISGQVIECLFVGTFTVIGYMIIQQPYGLLLGVIAGICNIIPYVGPYFG 274 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 S+ + I + + + I + + P ++G +++ L L+ + Sbjct: 275 IFPSLLVAIAQSPGQVVSVIIVVLIVQQVDGNFIYPNVIGKSLQIHPLTIIILLLVAGKI 334 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+LG+ + A++ V+ K ++E I Sbjct: 335 SGILGMILAVPAYAIVKVLINFIHHIWKLDQETIEEK 371 >gi|323464519|gb|ADX76672.1| conserved membrane protein, putative [Staphylococcus pseudintermedius ED99] Length = 400 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 119/318 (37%), Gaps = 9/318 (2%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + P+ + + + + + I + ++ + + + L + L+ Sbjct: 77 YLFNPVIN-LMERYNINRIWGITILFLGIIGMITIAVNLLIPIVSFQFDRLMDNFPNYLN 135 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + IP + S+ +++ L+ TF D + F + Sbjct: 136 KLTSFANNMMHIP---FLSDYYSQIEKAVTGLQEKIPTF-----ADGLSSKIRVFAEAVV 187 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + + II + LFF +DG + + + F + + + + S G I+ Sbjct: 188 NITVVIITVPFVLFFMLKDGHRFKEFSNKIVPPKFRKDVHDLLDKMSEQVGSYIQGQIIV 247 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 + G++L Y + G+ + L I A+ +++P P + +I + I + F L Sbjct: 248 SFCIGILLFIGYSIIGLDYALILASIAAVTSVVPYLGPTIAISPAIIISIITSPFMLIKL 307 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + FI + P ++G +K+ L F L+ +G++G+ +G A++ V+ Sbjct: 308 IVVWTAVQFIEGHFISPNIMGKTLKIHPLTIIFVLLSAGNLLGVVGVILGIPSYAILKVL 367 Query: 342 WKESIMAIKENKEKISSN 359 + K K ++ Sbjct: 368 VSHIFLLFKRRYNKYYAD 385 >gi|322368907|ref|ZP_08043474.1| Htr-like protein [Haladaptatus paucihalophilus DX253] gi|320551638|gb|EFW93285.1| Htr-like protein [Haladaptatus paucihalophilus DX253] Length = 395 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 120/346 (34%), Gaps = 36/346 (10%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L +L+ + F + L + + + P+Y + S AV V + +L Sbjct: 4 LAALFVIYSFIGTFVFGLFLYYATRPVYRRLQRRIRPRSLAAAVALLVLALPA----ILL 59 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + Y ++ EL + AN +P P + + Q+ + L E Sbjct: 60 VAYTLIIAFHELTTVARTANLGALPQP------------VQQYGDISRLAQNPEQLLENA 107 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T I+ ++ + L + MI F+ RD +S+ Sbjct: 108 DNTKLIEQAFGSTYKYLAFVGNAALHLFVMIAIAFYLLRDDHKLSRWFHRTFADTGGVL- 166 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--------GVPSHVALGVITAIMA 252 + V S F G + A G + +Y L G+P +G++T + + Sbjct: 167 EAYVHRVDSDFNSIFFGNILNAFMTGTIGAISYNLLDMAAPPGIGIPYPTVVGLLTGVAS 226 Query: 253 MIP-GGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +IP G + + V+ + + F A + I I D LRP++ G Sbjct: 227 LIPVVGMKLVYFPVTGVIGAEALMARDPGLLWFPAVFALVSFVIVDTIPDLVLRPYVSGR 286 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + G G G+F+GP+++ L+ K + + Sbjct: 287 --NLHVGMVMLAYIFGPLLFGWYGIFLGPMILVLVVHFVKIVLPEL 330 >gi|329929680|ref|ZP_08283372.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] gi|328935943|gb|EGG32400.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] Length = 372 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 128/368 (34%), Gaps = 20/368 (5%) Query: 1 MRETMLNPQGIMRWMI--MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M ML G W++ +F+I +Y L P L A II + P + Sbjct: 1 MERLMLKRLGRGVWVLSSIFMIAYLIYVLLPLLYPFLLAWIIAYAMNPCVNLLQRSLRMP 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + ++ L + E L++ N H WL+ Sbjct: 61 RWIAVTLSLLLYFGAALLILTAAVSRLVKE---LIALSQSFNLHIDAWMEWLTAWTQNES 117 Query: 119 ASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLS---------- 166 + + Q+ +T + T I + + L Sbjct: 118 FQNIVNEISRFYQNNPNYHDTINQNITRTTQTIGTAVTDLVTGIFNGILQIIYYLPNLGT 177 Query: 167 -IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I ++++ FF ++ L L + I + K + I+ Sbjct: 178 IFIVVLLSTFFLSNSWERHNRALLRLLPGVIRKPMNYIFSDLKKALFGFARAQLILISIT 237 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 +++ + GV S ++G++ ++ ++P G I S+Y + ++ L + Sbjct: 238 AVIVTITLYALGVDSAFSIGLLIGLVDLLPYLGVGIVLIPWSLYAFMSDDLTLGIGLTVL 297 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +I L +V + + P ++ + L L G+ G++ G+LGL IGPV + ++ + Sbjct: 298 YSIIL-VVRQIMEPKVLASSVGLDPLAALLGMFVGLKLFGILGLIIGPVSLVILDAFHRA 356 Query: 345 SIMAIKEN 352 + N Sbjct: 357 HVFKDLRN 364 >gi|121998980|ref|YP_001003767.1| hypothetical protein Hhal_2201 [Halorhodospira halophila SL1] gi|121590385|gb|ABM62965.1| protein of unknown function UPF0118 [Halorhodospira halophila SL1] Length = 365 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 126/359 (35%), Gaps = 11/359 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R T +PQ ++M + L +L L APV++A++I + + F Sbjct: 8 LRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFERAGVPR-M 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 VI + + ++ L L ++ +LV ++ G + L + +++ Sbjct: 67 LAVVIVILFLTTFLVLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHYPQLFSE 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L + G + + MI + + + +FF +D Sbjct: 127 AQIREMLDTARREITDL-------GQRVVASVTVQSLMILGTLVIYAVLVPFLVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + Q + + A+ ++ V + I + G I + V + L GVP Sbjct: 180 KRLLLQWVSNHMPR-HRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPF 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRP 298 + L V T + +IP GA + V++ + L + ++D L P Sbjct: 239 AMLLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L + ++ G G+F L I I K + K ++ + Sbjct: 299 LLFSEVVNLHPVAIIVSILVFGGIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDESA 357 >gi|329946826|ref|ZP_08294238.1| hypothetical protein HMPREF9056_02142 [Actinomyces sp. oral taxon 170 str. F0386] gi|328526637|gb|EGF53650.1| hypothetical protein HMPREF9056_02142 [Actinomyces sp. oral taxon 170 str. F0386] Length = 440 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 119/343 (34%), Gaps = 19/343 (5%) Query: 10 GIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFL 62 GI W+ + II+V F + AL+ P+ + F TFL Sbjct: 89 GIGAWLGLGIIIVIGLVFYATSQVIPVFIGLFMALVFTSILQPMVNLFARIMPRYPATFL 148 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ T+ + + ++ + L S+ + +L P + ++ Sbjct: 149 ALLTTIGAIAGLV---TYVVTSVTSQWNSLASQFSDGLDT---IMEFLERGPLHLTQQQV 202 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + Q + +L++N S +D + + FF G Sbjct: 203 YHQL----QLWLRQGQHYLQSNAPSLASEVVSN-ASAVVDVLTVLALALFVTIFFLASGG 257 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + + + G ++A+ + ++ G L G+P Sbjct: 258 RMWRWFLNELPATMRESTHRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLVGIPLAA 317 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I A IP GAP++ + L G + + A I L+P ++ Sbjct: 318 PLAVLVFIGAFIPIIGAPLAMLVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIM 377 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L + G+ G GLLG + L+++ ++ E Sbjct: 378 GRQVSLHPVVVIIGVALGTYASGLLGAIVAVPLISVAWSVYSE 420 >gi|260598868|ref|YP_003211439.1| putative permease perM [Cronobacter turicensis z3032] gi|260218045|emb|CBA32761.1| Putative permease perM [Cronobacter turicensis z3032] Length = 354 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 120/356 (33%), Gaps = 14/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I I+ L+FL G AP+L A+++ + WP + + S Sbjct: 10 RRRFSDPEAIALLAILVAGFCILFFLHGLLAPLLVAIVLAYLLEWPTSR--LQRIGCSRG 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V + + +V + + L+ + + + + +P A Sbjct: 68 LAATLVLVLFIGIVLVMAFVVVPVAWQQGIYLIRDIPGMLNK---LSDFAATLPKRFPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++++ T D + +++ + L + +I + + +FF +D Sbjct: 125 MDAGIIDAIAENMRTRIITL-----GDSVVKYSLASLVGLLTLAIYLILVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + +V + G + I G+ + + G+ Sbjct: 180 KEQLLNAVRRVLPRNRGLAGQVWVEMNQQVT-NYIRGKVLEMIVVGVATWIGFLIFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ I +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGISVLIPYIGAFMVTIPVVCVALFQFGMGTEFWSCFAVYLIIQGLDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + +E Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGIFFAIPLATLIKAVAHAWPETTPTAQE 354 >gi|71735238|ref|YP_275850.1| permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485897|ref|ZP_05639938.1| permease, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628379|ref|ZP_06461333.1| permease, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648133|ref|ZP_06479476.1| permease, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|298487972|ref|ZP_07006011.1| Putative permease often clustered with de novo purine synthesis [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71555791|gb|AAZ35002.1| permease, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157523|gb|EFH98604.1| Putative permease often clustered with de novo purine synthesis [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320327589|gb|EFW83601.1| permease, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330866056|gb|EGH00765.1| permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331013494|gb|EGH93550.1| permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 357 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 131/343 (38%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVAVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 347 >gi|319939440|ref|ZP_08013800.1| membrane protein [Streptococcus anginosus 1_2_62CV] gi|319811426|gb|EFW07721.1| membrane protein [Streptococcus anginosus 1_2_62CV] Length = 392 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 118/336 (35%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + L F+ PV+ A ++ + PI F+ K + + I + + L I Sbjct: 42 ISFIFIPVLEFIGVIMLPVILAGLLYYLLNPIVD-FMEKHKINRLVAITIVFILIALLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q + + + + +++ Sbjct: 101 WGLAVAIPSLQHQIVSFAKNLPANLQKSNKIIQDFLENRISDDVKPQLEEIVNNFSVQVT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ S + ++II M LF+ RDG ++ L Sbjct: 161 TWASNFSSKAVNWVSTLISTASQV----IVAIIIMPFILFYLLRDGKNLKSYLTKFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +I V + + G +AI ++ + + G+ V LGV I+ +IP Sbjct: 217 FREPVGQILTDVNTQLANYVRGQVTVAIIVAIMFIIFFKVIGLRYAVTLGVTAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPIMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTAGSMFGIWGVLLGIPVYASAKVVIAAIFKWYKK 372 >gi|281417731|ref|ZP_06248751.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] gi|281409133|gb|EFB39391.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] Length = 360 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 4/316 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L +FAP L A I P+ + K + F A+++ + + + + LL LF Sbjct: 28 LAIYFAPFLIAFAISSMIEPVIRFLMKKLKFRRKFAALVSLLLGLSMIAILLLMLFSKLY 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ L S + L I G+ ++ S + S + ++ + Sbjct: 88 NEITSLSSSQPEFWKEAYQNISNL--INRGLNIYFGLPSEVTAQISNMVSSLSNSVSSLV 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + + + I I++ +F D I + I Sbjct: 146 DSFVKGIYNTAISIPQMVIFIFVTILSTYFISSDRDRIYDYIKDNVPDALLNKIIDIKDS 205 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 + + I+ L + + GV + LG++ + + P G Sbjct: 206 MFTALFGYVKAQLILMTITFCELSLGFTIIGVKRPILLGLVISFIDAFPVLGTGGVLVPW 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY + +I L + I L ++ + + P +VG I L L T + G++ GL Sbjct: 266 AIYEFLTKDIRMGVSLLILYVIVL-VIRQMIEPKVVGEQIGLHPLMTLITMYLGMKFFGL 324 Query: 326 LGLFIGPVLMALIAVI 341 GL +GP++ + I Sbjct: 325 PGLILGPIVTLIFKNI 340 >gi|238783850|ref|ZP_04627868.1| permease perM [Yersinia bercovieri ATCC 43970] gi|238715237|gb|EEQ07231.1| permease perM [Yersinia bercovieri ATCC 43970] Length = 362 Score = 91.8 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 120/356 (33%), Gaps = 14/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 18 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRL 75 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S + + L Sbjct: 76 WAATIVLVVFGGITLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPS-------- 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + + +F+ + L + +I + + LFF +D Sbjct: 128 RYPALVDAGIVDMMAENLRNKLSGMGESVVKFSVASLIGLLTLAIYLILVPLMLFFLLKD 187 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + I + G + + G+ +++ G+ Sbjct: 188 KEQMLNAVRRVLPRNRGLAGQVWLE-MNQQITNYIRGKVVEMVVVGIATYLVFFIMGMNY 246 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA I V + L + + LF+ + + L P Sbjct: 247 SLLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGLGADFWTLFVAYLVVQGLDGNLLVP 306 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + + + Sbjct: 307 VLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEELALEAD 362 >gi|153845273|ref|ZP_01993756.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|149745127|gb|EDM56378.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] Length = 247 Score = 91.8 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 6/221 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +++ + ++ F PV+ II P+ A + + L Sbjct: 2 LIFVLLMFTYDIIRPFILPVIWGAIIAVALLPLTKKLQRAYGGRRGLAATTIVLLGIALL 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 + PL+ + + + + ++D P G E+WT ++ + Sbjct: 62 VTPLVMVSGSIVDGATHALDVLQNGQVKIPGPKASVADWPLVGDKLYEVWTLFATNLEQA 121 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +K+ + G + L I + S++ L ++ Sbjct: 122 IQTFMPQIKSALTSLLGMVGGVLGSLLLSILSLAIAAGFMTY-----SESLASGLQTIAI 176 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 K + ++ I+S LG+ +A + L++G+ + Sbjct: 177 RTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFL 217 >gi|21243684|ref|NP_643266.1| permease [Xanthomonas axonopodis pv. citri str. 306] gi|21109264|gb|AAM37802.1| permease [Xanthomonas axonopodis pv. citri str. 306] Length = 388 Score = 91.8 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 127/330 (38%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S V+ V LF++ L+ Sbjct: 25 VLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNVAVVLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIDALPQMRNWAIG-----TAIPWLEAKTGMQLMAWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 ++++ V+ G ++ + G + + + G+ + +G+I +++ IP Sbjct: 199 GTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIAGLISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|320114881|ref|YP_004185040.1| sporulation integral membrane protein YtvI [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319927972|gb|ADV78657.1| sporulation integral membrane protein YtvI [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 354 Score = 91.8 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 126/349 (36%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L ++ + + + ++ + Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSL---AEISTNYANTINDIILNLVDRIRMY 122 Query: 121 EL-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + +++ + S + + + F ++ + ++A FF + Sbjct: 123 YISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 183 DKQLILDFIKRQIPSHWAQHAKSIQVNLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFD 242 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++ I+ +P G+ ++Y +I N L + + + +V + + P Sbjct: 243 YPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVV-VVRQIIEP 301 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + G + G LGL IGPV + + + + I+ Sbjct: 302 KIVGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|146308016|ref|YP_001188481.1| hypothetical protein Pmen_2994 [Pseudomonas mendocina ymp] gi|145576217|gb|ABP85749.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 360 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 125/324 (38%), Gaps = 14/324 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +P L +++ + P+ + + + ++ T+ L L ++ Sbjct: 24 HPILSPFLIGILLAYLGDPLVDRLERHRLSRTGGVVLVFTLF--------ALVLLIMLLV 75 Query: 88 EMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKT-N 144 + L ++V Q + WL +P L L Q ++ S+ KT + Sbjct: 76 LVPMLGRQLVRLYQLAPEMLDWLQGTALPWSQSHLGLQNDLLQVDQLKQVFSDNIGKTTD 135 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + A+ G+ L + +++ + + F+ RD + +++ L A K++ Sbjct: 136 VLRAVLAQATSSGLALLAWLGNLLLIPVVSFYLMRDWDVLVERVRRLLPRQREALAVKLA 195 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 +V+ + G ++ + ++ + L G+ + +GV+ + ++P I Sbjct: 196 GECHEVLGAFLRGQLLVMLALSIIYSAGLMLVGLELGLLIGVLAGLANIVPYMGFIVGIG 255 Query: 265 VSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + + + L P LVG I L + F ++ G + Sbjct: 256 AALTAALFQFGLDPYPLLGIGVVFMVGQMLEGMLLTPLLVGDRIGLHPVAVIFAILAGGQ 315 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G G+ + + A+I V+ + + Sbjct: 316 LFGFTGVLLALPVAAVIMVLLRHA 339 >gi|325693704|gb|EGD35623.1| permease [Streptococcus sanguinis SK150] Length = 366 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 127/354 (35%), Gaps = 29/354 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVS 69 I L L F+P++ ++ F + L V+ V Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLDKCRVPQKLQRGLALVLEVLILVL 86 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 +M + ++ + ++ E + KV V +WL G+ +S Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSETIGKVA------PQVAKWLQQ--SGLLSSSQLKDLTKQ 138 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q+ + I + IF ++ S+I I +F F + Sbjct: 139 LQNSD------IVNRAIYLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITS 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + P K V VI T +G I A+ G+++ AY L G+P G Sbjct: 192 RLLQVMLPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTG 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ +++ IP P S A+ + + + A I + P +VG + Sbjct: 252 VLAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L T + G GL+G+ + A+I + +E ++ +E K + S++ Sbjct: 312 GLPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKAEGSAS 365 >gi|268679040|ref|YP_003303471.1| hypothetical protein Sdel_0399 [Sulfurospirillum deleyianum DSM 6946] gi|268617071|gb|ACZ11436.1| protein of unknown function UPF0118 [Sulfurospirillum deleyianum DSM 6946] Length = 346 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 108/323 (33%), Gaps = 24/323 (7%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + F + A ++ ++ I + A+++T + L PL++ Sbjct: 24 QPFLMIIAIASLLAMATYTINFKLYKLTKNRH-IAAILSTSLLSLLLFGPLIYSLTSIGS 82 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ QH + + P S SL T Sbjct: 83 IANNFDFAMIEKVQHYLKTLDYQLPTPFAFMQS-----------SLDEFINTLNIAQMSS 131 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + ++ +++ FF +G + + S+ L + V Sbjct: 132 TALSYLGSLGKNSAGFLKDMLLIVVFFFFALLNGKDLIDYIKSVMP-LGAQEVNMVFAEV 190 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 V+ + AI +G++ G + LG+ ++IP G + + + Sbjct: 191 TSVMSVVLYSILFSAIFQGMLFSFIGMYFGYDG-LLLGIFYGFASLIPVIGGALMWIPLC 249 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG--------GPIKLPFLPTFFGLV 317 + GN +A + L+ + + I+ D ++P ++ P + L FF + Sbjct: 250 ALEIAHGNTTSAIIIALYSIVIISIIADTFVKPLIIKYINDKMVKTPTMVNELLIFFAIF 309 Query: 318 GGVRTMGLLGLFIGPVLMALIAV 340 G+ T G G+ +GP + L Sbjct: 310 AGLTTFGFWGMILGPAITTLFIS 332 >gi|222085484|ref|YP_002544014.1| permease protein [Agrobacterium radiobacter K84] gi|221722932|gb|ACM26088.1| permease protein [Agrobacterium radiobacter K84] Length = 376 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 111/328 (33%), Gaps = 11/328 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T L Q +++ I +V LY P ++ + + + P+ + S Sbjct: 8 TSLKRQVTFWVVVLAIFIVFLYLFSSILLPFIAGMAVAYFLDPVADRLE-RIGLSRLMAT 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ V+ + F + L + + + + V + Q + + W Sbjct: 67 VVILVAFVLFFALALTIVIPIIINQFNDFVQHIPGYVQQLQQLIAKTQTMVLPDWVRNQL 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++ +F+ + G ++ ++ + F+ D Sbjct: 127 GVIKDNFSNIMSEGLSFVGG-----LFAQIWSSGKALVNIISLMVVTPVVAFYMLLDWDR 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++D+ A ++I+ + + I G + I G+ G L G+ + Sbjct: 182 MIAKVDAWVPRDQVATVRQIATEIDQSIAGFIRGQGSLCIILGVYYGVGLSLVGLNFGLL 241 Query: 244 LGVITAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G +++ IP + +V++ I+ L ++ F+ L+P Sbjct: 242 IGFFAGMISFIPYVGSLVGLFIAVSVALVQFWPDYIWVGLTLAVFFTG-QFLEGNVLQPK 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LVG + L + F L G +G Sbjct: 301 LVGESVGLHPVWLMFALFAFGALFGFVG 328 >gi|149275890|ref|ZP_01882035.1| transport protein [Pedobacter sp. BAL39] gi|149233318|gb|EDM38692.1| transport protein [Pedobacter sp. BAL39] Length = 363 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 116/321 (36%), Gaps = 16/321 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF F PV A + + + SK +A+ + LF++ + + Sbjct: 20 GLYFAAEFLIPVALAAVFSMLFIRLCNWLESKGMGR-----GLASFLCILLFVLTVAAIV 74 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ +V + + + L + + + + + + Sbjct: 75 LLLSWQLSGMVENMDDMKKRLTALLSNLQ---------QWFQQQVGISPTQQEELVKQQG 125 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F + ++ I +++ +F F + I + + L Sbjct: 126 QSAGSGTGSMLANFAGSIMGILVNTILVLVYMFLFLFNRSHIKKFILKLVPQDEKGKADL 185 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I KV + G+ + + ++ G + + GV + V+ I+ +IP ++ Sbjct: 186 IVHRAGKVSQQYLSGLGAMIVVLWIMYGIGFSIVGVEGALFFAVLCGILEIIPFVGNLTG 245 Query: 263 TAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 T++++ ++ G+ + + + F+ L P +VG + + L T +V G Sbjct: 246 TSLTVLSVVVQGGDSKMIIGVLVTYGLVQFLQTYILEPLIVGEQVNINPLFTILVIVLGE 305 Query: 321 RTMGLLGLFIGPVLMALIAVI 341 G+ G+ + L+ ++ +I Sbjct: 306 MVWGIAGMILAIPLLGIVKII 326 >gi|311898142|dbj|BAJ30550.1| hypothetical protein KSE_47700 [Kitasatospora setae KM-6054] Length = 481 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 98/292 (33%), Gaps = 13/292 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + A + ++ + + F+F+ + + ++V + + WL Sbjct: 178 WLRRHGVPRSLAAAMTFLAGLASIALVGWFVFWQVSSNLDSVTTQVQAG---VLKLRGWL 234 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P + ++ ++ SE I ++ ++ Sbjct: 235 LNGPFHLTPDQINNFTNQITTAIGKNSEQLTSAGFTGV---------TIAVELLTGVVLT 285 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 FF DG I + + + G ++A + L +G Sbjct: 286 AFTTFFLLYDGARIWSWVLRGLPRHSRYAMAGAGPKAWATLTAYVRGTVVVAFIDALCIG 345 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + GVP + L VI + A +P GA ++ T + L+ + A Sbjct: 346 IGLGVLGVPMAMPLAVIIFLGAFVPLVGALVTGTIAVLIALVTVGLGKALIALAILVGVQ 405 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+P ++G +++ L G+ G G+ G + L+A+ + Sbjct: 406 QLEGHILQPLILGRAVRVHPLAVVLGVAAGSILGGIPGAIVAVPLIAVTNTV 457 >gi|325916437|ref|ZP_08178709.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325537357|gb|EGD09081.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 389 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 123/330 (37%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S + V LF++ L+ Sbjct: 25 VLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNMAVSLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIDALPQMRAWAIS-----TAIPWLEAKTGVELMGWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGAAKTFFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 +++ V+ G ++ + G + + + G+ + +G+I ++ IP Sbjct: 199 GTVSRLALESNDVLGGFIRGQFLVMLALGAIYATGLSIIGLNLGLLIGIIAGFISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|320006939|gb|ADW01789.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 371 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 116/350 (33%), Gaps = 17/350 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSV 70 +++ + V+L+ L ++ V+ L++G + F+ ++ A TV Sbjct: 25 LLVLVMTAVALWLLGRMWS-VVWPLVVGLLLTTLTWPLTRFLRRRGWPPALAASTVTVLF 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + EL VV Q WAS Sbjct: 84 LLVAGGAVALIAVPVASQSGELADGVVEGIQRL------------REWASGPPLNIGDDQ 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S T + + + ++ ++ + + +FF +DG L Sbjct: 132 ITGAFDSATARVQDSVGSMVTTVVTGVSTVVNGVVTAVLAVFLMFFMLKDGPRFLPWLAR 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + + + +++G W+ GVP + L V+T + Sbjct: 192 QLPGRLATDVPTVAARGWDTLGEFVRSQAYVGLLDAVLIGLGLWIVGVPLVLPLAVLTFV 251 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + +A + + + +P + + L Sbjct: 252 SAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHA 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G G++G + ALIAV+W + E E+ Sbjct: 312 AVVLLAVTLGGSLAGIVGSLLAVPAAALIAVVWNYVREQLVEPGEEPEVQ 361 >gi|313683109|ref|YP_004060847.1| hypothetical protein Sulku_1987 [Sulfuricurvum kujiense DSM 16994] gi|313155969|gb|ADR34647.1| protein of unknown function UPF0118 [Sulfuricurvum kujiense DSM 16994] Length = 345 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 131/358 (36%), Gaps = 28/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +++ + F+ ++ A ++ ++ I F+ + Sbjct: 1 MKKEYFTLTLLLIASYGIFILYEPFWMSIVVASLLAMSTHHIQMGFLQLTNNR-----FL 55 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP--RWLSDIPGGMWASELW 123 A++ L + Y M + ++ + + WL+ +P + E+ Sbjct: 56 ASMLSTLLLGLLFFAPLGYFMFRLSVMLQHLDPVIMSMLEAKLRGWLAHLPPSLSRVEV- 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ F I +AS+ G + + +F++I F + G Sbjct: 115 --------KIEAALTKFDPETLTQHIIAYASQIGSFTMSFLSGTVFILIFYFIAHYYGRD 166 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + H I + + F + + A+ EG + G A G + + Sbjct: 167 IFEFFKRSA-HFPQQESTLIIFEMRSSMSVVFYSILVTAVFEGALFGVAVGYMGY-NGLL 224 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF-- 299 G++ ++IP G + + +++ L G+ NA + L+ I + ++ D ++P Sbjct: 225 FGIMYGFASLIPVVGGVVMWLPFALFELALGHTENALFITLYTIIVISVIADTFIKPVII 284 Query: 300 ------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ K+ L FF ++ G+ T G G+ IGP + L + K + +E Sbjct: 285 KLINQRLIKPQEKINELIIFFAILAGLATFGFWGMIIGPAITVLFLTLMKITEAQSEE 342 >gi|157693603|ref|YP_001488065.1| hypothetical protein BPUM_2850 [Bacillus pumilus SAFR-032] gi|157682361|gb|ABV63505.1| hypothetical membrane protein [Bacillus pumilus SAFR-032] Length = 367 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 114/311 (36%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+L A I+ F PI K T +I + + L + + ++ Sbjct: 41 FVPILLAGILFFIFNPIVRFLSKKIP--RTLAILIIYLLFIGLITFIVNAAGPVIISQVG 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV + ++++D + + ++ + + LK + Sbjct: 99 GLVKSFPGYVT---DMQKFINDFSHSKTFTWMMSQDYVSVSKFEQTVVSTLKALPENIAS 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ FG + + L++I + LF+ +DG +L + KI + + Sbjct: 156 SMSAVFG-VIANIALAVITVPFILFYMLKDGHKFPDKLVQFLPMPYRKEGLKIFKELNDT 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G I+ + G+ Y L GV + LG+I A+ +IP P A ++ + Sbjct: 215 LAAYIQGQIIVCLFVGVACFIGYLLIGVKYALILGIIIAVTNVIPYLGPYLGAAPAVLIA 274 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A + + I + P ++G + L L+G G+LG+ Sbjct: 275 FLDSPGKAVVTVIVILVVQQIDGNVISPLIIGKRLNTHPLTIILLLIGAGSFGGILGMIF 334 Query: 331 GPVLMALIAVI 341 + AL+ I Sbjct: 335 AVPVYALLKAI 345 >gi|300214220|gb|ADJ78636.1| Hypothetical membrane spanning protein [Lactobacillus salivarius CECT 5713] Length = 376 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 119/339 (35%), Gaps = 6/339 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLL 79 + F F PV+ + + + P+ I K + + T I ++V + + + Sbjct: 35 VAFFSTLFIPVIISGFLYYMLLPLVKLLMKVKIGKFKINRTGAVAIVFIAVFAIIAMSIA 94 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 FL +++++ L++K + + +S L L + S + Sbjct: 95 FLLPKIIVQVENLITKSPTYVSQL--EKNFQHFLKYDSRSSWLKDIDLQSYLNRFEGSGS 152 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + + ++++ + LF+ +DG+ + + A Sbjct: 153 EMIAKFMKSLTNSLGSIISAITNITVTVLTVPFMLFYMLKDGYKLMPSILKFVPRKRTAQ 212 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + + + G I I G+ Y LAGVP + G+ +IP P Sbjct: 213 VEAMLQDMSNTLSKYISGQAIECIFVGICTAIGYGLAGVPYALLTGIFAGATNIIPYIGP 272 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ L + + A + I I + P ++G + + L L+ Sbjct: 273 YIGLVPALILSLTDSFNTAVMAIIVCIIVQQIDGNLIYPNVIGKSVDIHPLTIILLLLVA 332 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + GLLG+ + A+I VI K I E Sbjct: 333 GKIAGLLGIILCIPFYAIIKVIVKHVREVIILENESSDE 371 >gi|308182723|ref|YP_003926850.1| membrane protein [Helicobacter pylori PeCan4] gi|308064908|gb|ADO06800.1| membrane protein [Helicobacter pylori PeCan4] Length = 349 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 138/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y G + E+ + + +WL +E + Sbjct: 59 CVLVLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F T+ ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSATSITGYLLKVSSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPITIYELYHGNVNEAIFITLYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|266619736|ref|ZP_06112671.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288868696|gb|EFD00995.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 376 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 128/350 (36%), Gaps = 12/350 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF-----LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + +I F+IL ++ L F P L L + P+ + Sbjct: 12 RRMEGRKRFITNVIYFVILGGIFLFVMKRLVPMFFPFLLGLTVAAVLSPLIRKLCGRTGG 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPG 115 +++ + + ++ LF + + ++ L K+ I + I Sbjct: 72 KRAPVSIAVLLVFYGILVMAALFSASHIVAFIQNLAGKLPQFYMEVIEPELGILFERIVV 131 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + W +S SL+ ++ + T I AS + F + IF II+ F Sbjct: 132 SFPEYQDWLSQMS--ASLENALQSGIMTVSGTLIGWGASWI-VGFPAILVQTIFTIISSF 188 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 FF D I + + + + I ++ L + L Sbjct: 189 FFTIDYDRIWDFVLRQFKEERRKMIAETAAGARTTIWKILKVYALMMTITFAELYLGFVL 248 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +P + L + A++ ++P G ++ L I G +F+ I + IV + Sbjct: 249 LKIPMPLLLAFLVAVVDILPVLGTGTVLIPWALILCIIGKTGLGVGIFILYVI-ITIVRQ 307 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 TL P ++G + L + T + G + +G+LG+F PV+ ++ + E Sbjct: 308 TLEPKVIGQQVGLHPIVTLLCIFAGAQLIGVLGIFTFPVIATIVKKMNDE 357 >gi|159901056|ref|YP_001547303.1| hypothetical protein Haur_4544 [Herpetosiphon aurantiacus ATCC 23779] gi|159894095|gb|ABX07175.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 381 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 116/347 (33%), Gaps = 8/347 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++F + L A+++ + F + I + + + Sbjct: 17 TLLIFSGVWITILLNHVLVLFFVAVLLAVAISGVVQRFEQLRIARP-----ITILVIYTI 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + L + + + + V + + + P + A + T + P Sbjct: 72 IIAMFISLGFVLVPMVSQQVRLLAEQFPNLVRQPTQQAS---AWLAQQFPTLRVPLPTGD 128 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + A FG + ++ I +++ FF S + + Sbjct: 129 LAGQAAHYAGTVVGGFSGAAFTFGRTLMGVIINFIVVLVLAFFLVSRANVASNFIKLMIP 188 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + F ++ ++ + + +A + G W+ GVP VALGVI ++ + Sbjct: 189 NRFQERLINVTNVIGRRLGRWVWAQLTVATFYAVCFGMGLWMLGVPYPVALGVIGGMLEL 248 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP T +++ + A + + I I + P ++G ++ + T Sbjct: 249 IPYVGGFVATILTMLVAFTVQPMLAVWVLVLHLIVGNIEVHIIAPKVMGHAVETHPVITI 308 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L G+ +G++G I L + + +E + + + + Sbjct: 309 LALFSGIELLGIIGGVIAIPLAVVGQALVEEFWIKRIREAQPAAESL 355 >gi|312865058|ref|ZP_07725286.1| putative membrane protein [Streptococcus downei F0415] gi|311099169|gb|EFQ57385.1| putative membrane protein [Streptococcus downei F0415] Length = 392 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 102/317 (32%), Gaps = 7/317 (2%) Query: 47 IYSSFISK-KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + + +++ ++ + + + + + +K LVS + G Sbjct: 74 LMKKIFRRDIPGKRALSLILSYLTFVIVIFLIFSIVLPDLINSLKALVS--IDIEGLGKL 131 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V D + + L + T I + + + Sbjct: 132 VNNVQKDSNVQRFMRYFDIDLNKNVSHLLNQYNRQISTTVIGILTNLLTSV-TNLASGLI 190 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIA 222 S+ ++ + + +Q + L P Y KK ++ + F+G T+ A Sbjct: 191 SLFISLVFSIYVLAGKEKLGRQGNMLVHAYLPHYEKKFHYVRKVAHESFHGFFVGQTLEA 250 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 G + + +P +G++ A+IP P ++ L+ ++ A Sbjct: 251 SILGSLCALGMLIFKIPYPGTIGILVGFTALIPVIGPYIGLSIGAILIATQSVPQAIFFV 310 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I + P +VG I LP + + G G+LGL I A I + Sbjct: 311 IYLIILQQFEGNLIYPRVVGHSIGLPPMWVILAITIGASFWGVLGLLIAVPSAATIYKLI 370 Query: 343 KESIMAIKENKEKISSN 359 + + K + + Sbjct: 371 RNQVYTKKARETEQKKE 387 >gi|70731784|ref|YP_261526.1| permease [Pseudomonas fluorescens Pf-5] gi|68346083|gb|AAY93689.1| permease, putative [Pseudomonas fluorescens Pf-5] Length = 357 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 123/335 (36%), Gaps = 14/335 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + +Y L +P L AL++ + P+ S T+ V + + Sbjct: 12 VVLLACGFVYLLHPILSPFLVALLLAYLFDPLVDRLEQW-GLSRTWGVVAVFALFTLIVM 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSL 133 LL L ++ L + W+ +P L + Sbjct: 71 TLLLVLVPMLAKQLVRLYELA-------PQMLDWVQHSAMPWVQSKLGLADGFWKFDKVK 123 Query: 134 KILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 +SE +T + + + A+ G+ + + +++ + + F+ RD + ++ SL Sbjct: 124 AAISEHMGQTTDIVGVVLSQATASGLALIGWLANLVLIPVVSFYLLRDWDLMMAKIRSLL 183 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ +V+ + G ++ + G++ + L G+ + +G+I + A Sbjct: 184 PRSREEQVVSLAGECHEVLGAFVRGQLLVMLALGVIYAAGLMLVGLELGLLIGLIAGLAA 243 Query: 253 MIPGGAPISFTAVSIY---LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++P + ++ G+++ + + + L P LVG I L Sbjct: 244 IVPYMGFVIGIGAALIAGLFQFGGDLYPMIGIVAVFMVGQALEGMVLTPLLVGDRIGLHP 303 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G G G+ + + A+I V+ + Sbjct: 304 VAVIFAILAGGELFGFTGVLLALPVAAVIMVLVRH 338 >gi|307301008|ref|ZP_07580777.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307317742|ref|ZP_07597180.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306896504|gb|EFN27252.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306903963|gb|EFN34549.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 379 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 112/329 (34%), Gaps = 10/329 (3%) Query: 3 ETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +M + I W+++ + + L P L+ + + + P+ + S Sbjct: 14 SSMGLQRQIFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLE-RLGLSRLM 72 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + + + L+ + + + E + K+ W + Sbjct: 73 ATIAILVAFVVVLALSLMIIVPLVVTQAAEFIQKMPGYITRLQEFLTDSQSTLLPDWLAG 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T + L +FL T + + G+ L+ + + F+ D Sbjct: 133 QMTTIKQNSAKLLEQGASFLGT-----LFQQIWNSGLALLNILSLFVITPVVAFYLLLDW 187 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++DS + ++I+R + I G + + GL G + G+ Sbjct: 188 DRMVDRVDSWIPRDYVEVVRQIARDMNTTIAGFVRGQGSLCLILGLYYGIGLTMVGLNFG 247 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ +++ IP + +++ + + + + F+ L+P Sbjct: 248 LLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYVWILLVLAVFFSGQFLEGNILQP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LVG + L + F L+ G +G Sbjct: 308 KLVGKSVGLHPVWLMFALLAFGALFGFVG 336 >gi|238798726|ref|ZP_04642198.1| permease perM [Yersinia mollaretii ATCC 43969] gi|238717422|gb|EEQ09266.1| permease perM [Yersinia mollaretii ATCC 43969] Length = 362 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 125/357 (35%), Gaps = 16/357 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 18 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRL 75 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWA 119 + A I V + ++ + + + L+S + + L S P + A Sbjct: 76 WAATIVLVVFGGITLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPSRYPALVDA 135 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L + E+ +K + I L + +I + + LFF + Sbjct: 136 GIVDMMAENLRNKLSGMGESVVKISVASLI---------GLLTLAIYLILVPLMLFFLLK 186 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + + + I + G + + G+ +++ G+ Sbjct: 187 DKEQMLNAVRRVLPRNRGLAGQVWLE-MNQQITNYIRGKVVEMVVVGIATYLVFFIMGMN 245 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLR 297 + L V+ +IP GA I V + L + + LF+ + + L Sbjct: 246 YSLLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGLGADFWTLFVAYLVVQGLDGNLLV 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + + Sbjct: 306 PVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEELALDAD 362 >gi|15673797|ref|NP_267972.1| permease [Lactococcus lactis subsp. lactis Il1403] gi|12724842|gb|AAK05913.1|AE006411_8 permease [Lactococcus lactis subsp. lactis Il1403] gi|326407304|gb|ADZ64375.1| permease [Lactococcus lactis subsp. lactis CV56] Length = 371 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 107/314 (34%), Gaps = 4/314 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P + A + + P+ + K I + ++ + I + + + ++ Sbjct: 42 FVPFIIAGFLYYVFNPVVTFMEEKLRIKKVLGIFIVLLLILGMIIFAIASVIPSLISQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE-TFLKTNGIDFI 149 L + + V W+ + ++++ + + K+ T + N ++ I Sbjct: 102 SL---INATGKAYPQVRAWIEGLQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSI 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 I + +I + I L++ +DG I L ++ + Sbjct: 159 TVSVGSIVGIITSIVMVMILVPILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNH 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I G+ + A+ +V+ Y + G+P + + +IP P I Sbjct: 219 TISRYISGVALDALLVFIVVFIGYMVLGIPYAFLFALFAGVTNLIPYAGPYIGVLPMIVT 278 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + A ++ + + + P +VG +K+ + ++ G+LG+ Sbjct: 279 VAFNRPVTALIAVIYVLVLQQLDGNLVYPKIVGSAVKVHPVTVMILMLISGSLYGILGMI 338 Query: 330 IGPVLMALIAVIWK 343 I L+ I K Sbjct: 339 IAVPAYCLVKEIVK 352 >gi|304315561|ref|YP_003850706.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777063|gb|ADL67622.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 354 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 123/353 (34%), Gaps = 21/353 (5%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 M++ + Q ++ +I+ + +++S Y L F P AL + P K Sbjct: 1 MKDFLSRYQSTIKNVIIILAVIISFYLFVFKLIPFLMPFAVALFLAILIDPAVEFLEKKL 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + + ++ + + + L + E+ L ++ D+ Sbjct: 61 KVPRGLSSAFLILLLIAIIGLLISLLITQLVFELNTLAEHAPNYTKN--------FDVVI 112 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDF------IPRFASRFGMIFLDYCLSIIF 169 + ++S P ++ E L++ + + ++ I Sbjct: 113 SDLIDRIRIYYISLPTNISTFLENNLQSILNNISVLAKNFAAWILGLATKLPNFFFMSII 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I++ FF +D + I + + + + I + + + I + + Sbjct: 173 TIVSTFFLSKDKWLILNFIKRQFPSNWALHAENIKGDLFQTLIGFIRAEITIMFITFMEV 232 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + G LG++ + + ++P G+ ++Y + N L + I Sbjct: 233 SIGLTIIGFDYAFLLGLLVSFIDILPVLGSGSVLVPWAVYNIFTKNYLIGIYLLILYGI- 291 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + +V + + P +VG I L L T + G + G GL +GPV + + Sbjct: 292 VTVVRQMIEPKIVGQSIGLHPLVTLLSMFIGAKLFGGFGLIMGPVFVVVFKTF 344 >gi|295836752|ref|ZP_06823685.1| permease [Streptomyces sp. SPB74] gi|197697625|gb|EDY44558.1| permease [Streptomyces sp. SPB74] Length = 444 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 106/307 (34%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAP---VLSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ +++ L + ++ A ++ + +++ + T+ Sbjct: 81 LLVLAATVWVLMKVISAVRLIVLAFVVALLITALLQPLVARLTRHGVPRGLATALTTLFG 140 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + +L S+V + + RWL D P + ++ Sbjct: 141 FLVMGLMGWFVVWQIMENVDQLSSQVQDGIE---DLRRWLLDSPFHVTEKQI-------- 189 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + TN + ++ ++ + F DG I Sbjct: 190 NDIAKNLREAIGTNTNQLTSAGIEGV-TVIVEMFTGLLLAFFSTIFLLYDGKKIWGWFLK 248 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + S G I+A+ + + +G ++ VP V L VI + Sbjct: 249 LVPAAAREGVAGAGPRAWDTLTSYVRGTVIVALIDAVFIGIGIYVLDVPMAVPLAVIIFL 308 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P + A+++ + L+ ++ A + + I L+PF++G +++ Sbjct: 309 AAFVPLVGAVVSGALAVLVALVTQGVWTAIIVLGVVLLVQQIEGHVLQPFILGRAVRVHP 368 Query: 310 LPTFFGL 316 L + Sbjct: 369 LAVVLSV 375 >gi|323705871|ref|ZP_08117443.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium xylanolyticum LX-11] gi|323534867|gb|EGB24646.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium xylanolyticum LX-11] Length = 354 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 124/353 (35%), Gaps = 21/353 (5%) Query: 1 MRETMLNPQGIMR--WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 M++ + Q +R +I+ ++L F L F P AL + P K Sbjct: 1 MKDFLSRYQSTIRNSIVILAVVLSFYLFVFKLIPFLMPFAVALFLAILIDPAVEFSEKKL 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + + ++ + + + L + E+ L ++ D+ Sbjct: 61 KIPRGLSSAFFILLLIGIIGLLISLLVTQLVFELNTLAEHAPSYTKN--------FDVVI 112 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDF------IPRFASRFGMIFLDYCLSIIF 169 + ++S P ++ E+ L++ + + ++ I Sbjct: 113 SDLIDRIRRYYVSLPTNISTFLESNLQSILNNISVYAKNFAGWILGLATKLPNFFFMSII 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I++ FF +D + I + + + + I + + + I L + Sbjct: 173 TIVSTFFLSKDKWLILNFIKRQFPSNWAFHAENIKGDLFQTLIGFIRAEITIMFITFLEV 232 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + G LG++ + + ++P G+ ++Y + N L + AI Sbjct: 233 SIGLTIIGFDYAFLLGLLVSFIDILPVLGSGSVLVPWALYNIFTKNYLIGIYLLIIYAI- 291 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + +V + + P +VG I L L T + G R G LGL +GPV + + Sbjct: 292 VTVVRQMIEPKIVGQSIGLHPLVTLLSMFIGARLFGGLGLIMGPVFVVVFKTF 344 >gi|319939615|ref|ZP_08013974.1| membrane protein [Streptococcus anginosus 1_2_62CV] gi|319811204|gb|EFW07510.1| membrane protein [Streptococcus anginosus 1_2_62CV] Length = 374 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 119/339 (35%), Gaps = 18/339 (5%) Query: 15 MIMFIILVSLY-----FLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +++ I+ ++ L F P L A + + + P+ + + F Sbjct: 14 VLLLTIIFFIWRQMDGLLSPFVSVLNTVLIPFLIAGFLYYVTNPLVKFLEKELKIKRIFG 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I V + + + +++L + ++ L+S + + W++ + S Sbjct: 74 ILITLVLLFGIIALGIIYLLPILITQLTSLIS---SSQNVYGELQNWINQL---SQHSLF 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ LS + N ++ + ++ L +I I L +F DG Sbjct: 128 KNLNIQSIIKQLNLSYVDILQNILNSVTNSLGSVVSAVVNTFLILIMTPIFLVYFLIDGD 187 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L+ K+ + I G++I A G + Y + G+ + Sbjct: 188 KLLPMLERTVLKRDKLNITKLLTNLNATIARYISGISIDAFIIGTLAFIGYSVIGLKYAL 247 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + I +IP P I + + ++ I I L P +VG Sbjct: 248 IFAIFSMIANLIPYVGPSIGLIPMIITYLIADPKKMVIAVIYMLIVQQIDGNILYPRIVG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G +K+ + L+ G++G+ + + +++ I Sbjct: 308 GVMKVHPITIMVLLLLSSNIYGIVGMIVAIPIYSILKEI 346 >gi|307265414|ref|ZP_07546970.1| sporulation integral membrane protein YtvI [Thermoanaerobacter wiegelii Rt8.B1] gi|326390340|ref|ZP_08211899.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus JW 200] gi|306919528|gb|EFN49746.1| sporulation integral membrane protein YtvI [Thermoanaerobacter wiegelii Rt8.B1] gi|325993617|gb|EGD52050.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus JW 200] Length = 354 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 121/349 (34%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL+ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLFAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWA 119 + I + ++ + + + E+ L AN + + I Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRI---RMY 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +++ + S + + + F ++ + ++A FF + Sbjct: 123 YVTLPPNITSLIENNMQSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 183 DKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFD 242 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++ I+ +P G+ ++Y +I N L + + + +V + + P Sbjct: 243 YPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVV-VVRQMIEP 301 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + G + G LGL IGPV + + + K I+ Sbjct: 302 KIVGQSIGLHPLVTLLSMFIGAKLFGALGLVIGPVFVVVFKALQKAEII 350 >gi|290889609|ref|ZP_06552699.1| hypothetical protein AWRIB429_0089 [Oenococcus oeni AWRIB429] gi|290480807|gb|EFD89441.1| hypothetical protein AWRIB429_0089 [Oenococcus oeni AWRIB429] Length = 394 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 100/318 (31%), Gaps = 10/318 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F++ F P++ A + + P+ I + + I + Sbjct: 39 FIRTIFLPLIVAGFLYYLLHPVVVFLEKHFHFKHLLAVAITFFVFIVILISVFVIFVPQL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++ + + W W K L + + + K + Sbjct: 99 IAQISNMLGSLPKFVDDMRNMTD--------SWVKSKWFKQLYQDVKISNIQKQISKYSS 150 Query: 146 --IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 ++ + ++II + I LF+ DG ++ + Sbjct: 151 TFLEMSLSSLGNIASFLTTFTINIITIPIMLFYMLADGDKFIPFINRFIFPSRSKEVNDL 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + I G I I + Y + P LG+ + +IP P Sbjct: 211 AARMNNTISRYIDGQFIEGIFVMFFITGGYLIIRQPFAPLLGIFAGLCVLIPYLGPFISI 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S+ + + + + + I + + P ++G +K+ L L+ Sbjct: 271 IPSLLIALTVSGQQVLAVLVVVLIVSQLDGNLIYPNVIGRNLKIHPLTIIIILLSAGNIW 330 Query: 324 GLLGLFIGPVLMALIAVI 341 GL+G+ +G + A++ + Sbjct: 331 GLIGIILGVPIYAVLRTL 348 >gi|90961351|ref|YP_535267.1| hypothetical protein LSL_0371 [Lactobacillus salivarius UCC118] gi|301301071|ref|ZP_07207231.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90820545|gb|ABD99184.1| Hypothetical membrane spanning protein [Lactobacillus salivarius UCC118] gi|300851341|gb|EFK79065.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 376 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 118/337 (35%), Gaps = 6/337 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 F F PV+ + + + P+ I K + + T I ++V + + + FL Sbjct: 37 FFSTLFIPVIISGFLYYMLLPLVKLLMKVKIGKFKINRTGAVAIVFIAVFAIIAMSIAFL 96 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 +++++ L++K + + +S L L + S + + Sbjct: 97 LPKIIVQVENLITKSPTYVSQL--EKNFQHFLKYDSRSSWLKDIDLQSYLNRFEGSGSEM 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++++ + LF+ +DG+ + + A + Sbjct: 155 IAKFMKSLTNSLGSIISAITNITVTVLTVPFMLFYMLKDGYKLMPSILKFVPRKRTAQVE 214 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + G I I G+ Y LAGVP + G+ +IP P Sbjct: 215 AMLQDMSNTLSKYISGQAIECIFVGICTAIGYGLAGVPYALLTGIFAGATNIIPYIGPYI 274 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L + + A + I I + P ++G + + L L+ + Sbjct: 275 GLVPALILSLTDSFNTAVMAIIVCIIVQQIDGNLIYPNVIGKSVDIHPLTIILLLLVAGK 334 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GLLG+ + A+I VI K I E Sbjct: 335 IAGLLGIILCIPFYAIIKVIVKHVREVIILENESSDE 371 >gi|330986708|gb|EGH84811.1| permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 357 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 130/343 (37%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVAVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD + ++ L Sbjct: 125 AISEHMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMIGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 347 >gi|260587474|ref|ZP_05853387.1| sporulation integral membrane protein YtvI [Blautia hansenii DSM 20583] gi|331084128|ref|ZP_08333234.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 6_1_63FAA] gi|260541739|gb|EEX22308.1| sporulation integral membrane protein YtvI [Blautia hansenii DSM 20583] gi|330401983|gb|EGG81556.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 6_1_63FAA] Length = 385 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 133/354 (37%), Gaps = 24/354 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKG--------FFAPVLSALIIGFTSWPIYSSFISKKEE 57 +N + ++ +++FI + L G FF P + +I + P+ + + Sbjct: 1 MNWKKHIKNLLVFIFTLLAVVLGGLIAFKFIRFFMPFVIGWLIALIANPLVRMLERRMKV 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV--------VLANQHGIPVPRW 109 + +++ ++V+ I + F+ + E L+ + + G + Sbjct: 61 ARKHTSMLLIIAVLAAIIGGIYFIGMKTLQEASSLIEQAPEIYSSFREDFQEAGENLSMI 120 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + ++P G+ K ++ Q AS F ++IIF Sbjct: 121 IEELPDGV------QKGIADFQDSLGNMIGTAVGKISQITVDQASNFAKNLPSIIIAIIF 174 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I++ +FF D I + L WK + R + F I ++L Sbjct: 175 TILSSYFFIADRDKILEFGREHTPQLIQEKWKILERCFRSIFGGYFKAQFKIMGVVFVIL 234 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + V + + + + + M+P G + +++ ++ G++ A L + + Sbjct: 235 CIGFLILKVNFAIVVAFLVSFLDMLPFFGTGTALIPWALFKILSGDMQYAVGLIILY-LT 293 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + + P +VG I + L T + G R G+LG+ + + A+I + Sbjct: 294 TQLIRRIIEPKVVGDSIGIDPLWTLICMYTGYRFAGVLGMILAVPVGAIIVNFY 347 >gi|196249921|ref|ZP_03148616.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] gi|196210435|gb|EDY05199.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] Length = 372 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 120/352 (34%), Gaps = 16/352 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++I+ ++V + + P + A I P+ + K + + Sbjct: 8 RFLRFLIVIAVVVLGLMAAYYVSTVTYPFIIAFFIALLINPLVNFLERKTKMPRWLAVSV 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASEL 122 + + ++ L + + L V Q I + IP + L Sbjct: 68 TLIVLFAAVAGIVILLIAEIVSGTQYLADVVPEKFQALIAYMESFAANQLIPLYQDLAVL 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-------SIIFMIIALF 175 + + Q + + + T + F R IF ++A F Sbjct: 128 FKSLNDNQQDTIMQNVQAVGTQIATTVGEFIQRVLQNIPQLLAWLPNAATVFIFSLLATF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D + + + K + + + + + +++ + Sbjct: 188 FISKDWHRLMRMIQQWLPAKARTSGKTVFLDLKRALFGFIKAQATLISITTVIVLIGLLI 247 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + + +I + ++P G I F IY + G+I A L + I + + + Sbjct: 248 LRVDYAITIALIIGFVDILPYLGTGIVFVPWIIYAAVSGDIPFAIGLGVLY-IVVLVQRQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ I L L T L G + +G LGL GPV++ +I + ++ Sbjct: 307 IMEPKVLSSSIGLDPLATLIALFVGFKLLGFLGLIAGPVILVIIRTLHSANV 358 >gi|317013986|gb|ADU81422.1| hypothetical protein HPGAM_02910 [Helicobacter pylori Gambia94/24] Length = 349 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 140/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + LY + F L A ++ + + + S+ + + Sbjct: 1 MKAQYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y G + E+ + + +WL +E + Sbjct: 59 CVLVLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKVSSYIGKYSLKLVTDALFILGLLFFFFYYGEKFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G+ G LG Sbjct: 168 RYFLGVLP-LEMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIIWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L G++ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 286 IKKRIFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 Query: 356 ISS 358 Sbjct: 346 TCE 348 >gi|256833114|ref|YP_003161841.1| hypothetical protein Jden_1895 [Jonesia denitrificans DSM 20603] gi|256686645|gb|ACV09538.1| protein of unknown function UPF0118 [Jonesia denitrificans DSM 20603] Length = 483 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 92/306 (30%), Gaps = 19/306 (6%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 P+ + + AV + ++++ + + EL + V Sbjct: 85 FTVLLQPMDRFLHTTLRFPRSLSAVTSVLALIAALATLITVAGQQIASGITELSDRAVQG 144 Query: 100 NQHGIPVPRWLSDIPGGMWASE---LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 I W P + S+ W L Q N + A Sbjct: 145 VNELI---SWAQRDPLNLDLSQIDAYWNDLLDAAQ------------NQSGALVSGALSV 189 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + I FF DG I + L + R + + Sbjct: 190 TSTIGHVIAGALIAIFCTIFFLIDGRKIWTWIVGLLPRHVRERTHQAGRRGIVTLSAYVR 249 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI 275 ++A + + +G L G+P V L + + A IP GA I+ + L+ Sbjct: 250 TQILVAFIDSIGIGVGAALIGLPLVVPLAALVFVGAFIPFVGAIITGAVAVLVALVVKGW 309 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A + + I L+PFL+G + + + + G G++G ++ Sbjct: 310 VWALVMLGIVLLVQQIEGNVLQPFLMGRAVAIHPVAVLLTVSAGTVLAGIVGAIFAVPIV 369 Query: 336 ALIAVI 341 A+ I Sbjct: 370 AVANTI 375 >gi|114566423|ref|YP_753577.1| hypothetical protein Swol_0888 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337358|gb|ABI68206.1| protein of unknown function UPF0118 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 370 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 134/351 (38%), Gaps = 17/351 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF---------------FAPVLSALIIGFTSWPIYSSFIS 53 + + + I+ ++L+++Y L + F P + A+++ P+ + F Sbjct: 10 KTLSKTTIVVMVLLAIYLLFHYVFPLAGKILARLPILFLPFIFAILLAVIIEPVVNFFEK 69 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K + + VI+ + V+ F L L + +M L +V+ + Sbjct: 70 KTHLNRNWSVVISLLLVVGGFFTLLSLLVSRIINDMSRLYPQVLHYSDQITASFMAAISN 129 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 ++ + + + + L ++ ++ R + + ++ +A Sbjct: 130 LNLLYLGLNLSPQAQNALQQNMENGIKLVSSLMEKSINGLIRSLAMLPGILVFLMIATVA 189 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF +D I + + +++ + +V+ I+ +V A Sbjct: 190 TFFIIKDRALIRSFVMQWIPGNVRSKTREVFAELFRVLVGFVKAYGILISVTTIVTMVAL 249 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G + +G+I ++ ++P G F I+ + G++ L + + + +V Sbjct: 250 RVLGFDYVITIGIIVGLLDILPVLGPGAFFVPWIIWHFVAGDLHLGISLLIVY-LLISVV 308 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L P +VG I L L T L G++ G G+ +GPVL+ + ++ Sbjct: 309 RQFLEPKIVGDNIGLHPLATLISLYAGLQLGGFTGMIMGPVLLVIFIASYR 359 >gi|227821507|ref|YP_002825477.1| putative permease protein [Sinorhizobium fredii NGR234] gi|227340506|gb|ACP24724.1| putative permease protein [Sinorhizobium fredii NGR234] Length = 388 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 106/326 (32%), Gaps = 10/326 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ + L P L+ + + + P+ + S + Sbjct: 10 LQRQIFFWLLVLAAFIAFLMVFSSILLPFLAGMALAYFLDPVADRL-QRLGLSRLMATIA 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWT 124 V+ + LF + L+ + + + + K+ + V W Sbjct: 69 ILVTFIVLFALSLIIVIPLIFTQAADFIQKMPGYVARLQAFVADTTQSTLVPDWLEAQMA 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L TFL T + + GM LD I + F+ D + Sbjct: 129 AIKQNSAKLLEQGATFLGT-----LFQQLWNSGMALLDILSLFIITPVVAFYLLLDWDHM 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q++DS ++I+R + I G + + GL L G+ + + Sbjct: 184 VQKVDSWVPRDHVDVVRQIARDMNTTIAGFVRGQGSLCVILGLYYAIGLSLVGLNFGLLI 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLV 301 G +++ IP + +++ + + + + F+ L+P LV Sbjct: 244 GFFAGMISFIPYVGSLVGLVLAVGVAVVQFWPDYIWILLVLAVFFTGQFLEGNILQPKLV 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L+ G +G Sbjct: 304 GKSVGLHPVWLMFALLAFGALFGFVG 329 >gi|194015510|ref|ZP_03054126.1| membrane protein YueF [Bacillus pumilus ATCC 7061] gi|194012914|gb|EDW22480.1| membrane protein YueF [Bacillus pumilus ATCC 7061] Length = 367 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 119/312 (38%), Gaps = 8/312 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM-LEM 89 F P+L A I+ F PI K S +A + + LFI + F+ + + Sbjct: 41 FVPILLAGILFFIFNPIVRFLSKKIPRS------LAILIIYLLFIGLITFIVNAAGPVIV 94 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +L V + + ++++D + + ++ + + LK + Sbjct: 95 TQLGGLVKSFPGYVTDMQKFINDFSHSKTFTWMMSQDYVSVSKFEQTVVSTLKALPENIA 154 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ FG + + L++I + LF+ +DG +L + KI + + Sbjct: 155 SSMSAVFG-VIANIALAVITVPFILFYMLKDGHKFPDKLVQFLPMPYRKEGLKIFKELND 213 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + + G I+ + G+ Y L GV + LG+I A+ +IP P A ++ + Sbjct: 214 TLAAYIQGQIIVCLFVGVACFIGYLLIGVKYALILGIIIAVTNVIPYLGPYLGAAPAVLI 273 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + A + + I + P ++G + L L+G G+LG+ Sbjct: 274 AFLDSPGKAVVTVIVILVVQQIDGNVISPLIIGKRLNTHPLTIILLLIGAGSFGGILGMI 333 Query: 330 IGPVLMALIAVI 341 + AL+ I Sbjct: 334 FAVPVYALLKAI 345 >gi|116332976|ref|YP_794503.1| permease [Lactobacillus brevis ATCC 367] gi|116098323|gb|ABJ63472.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 390 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 127/327 (38%), Gaps = 17/327 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 V+ A I+ + P+ + IA ++ + ++ L L + + Sbjct: 58 MPAVVVAGILFYVLDPLVHLMERRLHLRQGLAIAIAMIATAAIIVIIFLNLIPFLTKQTT 117 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSETFLKTNGIDF 148 ++S +P++ +D+ + LS+ + T+ G++ Sbjct: 118 GIIS----------ALPQFANDMLHNLNHLNQQHHWLSNKNLADINERVSTYFSKRGLNL 167 Query: 149 IPRFASRFGMIFL---DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S G + D+ ++II + LFF +DG + + + + + + Sbjct: 168 LTGTLSSLGNVVTTVSDWIITIITAPLVLFFMLKDGTRFPHYISQVVPTAYRSRFVVMLD 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + S G +A+ ++ + Y + G+ + +G++ + +IP G+ I+ Sbjct: 228 QMNVKVSSYVRGQLTVALCVLIIFTTGYSIIGLRYALLIGLLAGPLNLIPYFGSAIALVP 287 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I ++ + + + IE + + L P ++G + + + F L+ G + G Sbjct: 288 ALIMGVVT-SPSMLLGVVIVYLIEWVLETQVLSPLIMGNSLAMHPITIVFVLLAGGKMFG 346 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G+ G A++ V+ + +E Sbjct: 347 LVGVIFGVPGFAVLKVLATTAFQWYQE 373 >gi|15611581|ref|NP_223232.1| hypothetical protein jhp0514 [Helicobacter pylori J99] gi|8928476|sp|Q9ZLR4|Y567_HELPJ RecName: Full=UPF0118 membrane protein jhp_0514 gi|4155053|gb|AAD06090.1| putative Inner membrane protein [Helicobacter pylori J99] Length = 349 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 140/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + LY + F L A ++ + + + S+ + + Sbjct: 1 MKAQYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y G + E+ + + +WL +E + Sbjct: 59 CVLVLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKVSSYIGKYSLKLVTDALFILGLLFFFFYYGEKFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G+ G LG Sbjct: 168 RYFLGVLP-LEMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGTMIIWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L G++ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 286 IKKRIFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 Query: 356 ISS 358 Sbjct: 346 TCE 348 >gi|297202106|ref|ZP_06919503.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197713541|gb|EDY57575.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 459 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 103/317 (32%), Gaps = 18/317 (5%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ +++ L + V + A ++ + +++ + + Sbjct: 95 LLVLAGTVWVLMRVISSVQLVVFAFVVALLITALLQPTVARLMRHGVPRGPATALTAILG 154 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + +L ++ + WL P + ++ + Sbjct: 155 FVIIGLMGWFVTWQVMENIDDLSDQIQSGID---DLRNWLLKSPFHVTDKQINQIAKNLR 211 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ ++ + ++ I+ + F DG I Sbjct: 212 EAVGANTDQITSAGLEGV---------QVVVEALTGILLTFFSTLFLLYDGRRIWNWTLK 262 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + G ++A+ + + +G + VP V L V + Sbjct: 263 LVPAAARPAVAGAGPRAWHTLTAYVRGTVLVALIDAVFIGIGIYFLDVPMAVPLAVFIFL 322 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP ++ A+++ L+ +F A I L+PF++G +++ L Sbjct: 323 FSFIPLVGAVASGALAVLALVTQGVFTAVMTLAVVLAVQQIEGHILQPFILGRAVRVHPL 382 Query: 311 PTFFGLVGGVRTMGLLG 327 + G G+ G Sbjct: 383 AVVLTVATGGMVAGIGG 399 >gi|315221946|ref|ZP_07863857.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315188912|gb|EFU22616.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 374 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 111/316 (35%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L A + + + P+ + + F +I V + + + +++L Sbjct: 37 VLNTVLIPFLIAGFLYYVTNPLVKFLEKELKIKRIFGILITLVLLFGIIALGIIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L+S + + W++ + S ++ LS + N Sbjct: 97 ITQLTSLIS---SSQNVYGELQNWINQL---SQHSLFKNLNIQSIIKQLNLSYVDILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ L +I I L +F DG + L+ K+ Sbjct: 151 LNSVTNSLGSVVSAVVNTFLILIMTPIFLVYFLIDGDKLLPMLERTVLKRDKLNITKLLT 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I A G + Y + G+ + + + I +IP P Sbjct: 211 NLNATIARYISGISIDAFIIGTLAFIGYSVIGLKYALIFAIFSMIANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + + ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MIITYLIADPKKMVIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGI 330 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + + +++ I Sbjct: 331 VGMIVAIPIYSILKEI 346 >gi|296876177|ref|ZP_06900231.1| membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296432888|gb|EFH18681.1| membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 391 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F PV+ + ++ + PI F+ +K F + + L I Sbjct: 42 ITFIFIPIFEFAGAVMLPVIISGLLYYLLNPIVD-FLERKGLKRIFAISLVFFLIAVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + D + + Sbjct: 101 WGLAVVIPAVQRQVVSFFHNLPTYLEKANATIDDFLDNRVSSDIKPQLDEITKELSANIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ + +++I M +F+ RDG ++ + Sbjct: 161 SWASSISGRAVNWVSNLIGVASQV----IVALIIMPFIVFYLLRDGKNLKGHIVRFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ V + + G +AI ++ + + G+ V LG+ I+ +IP Sbjct: 217 IRKSAEQVLSDVNTQLSNYVRGQITVAIVVAIMFIVFFKIIGLRYAVTLGISAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + A+E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLVAGPEMFIKVLIVFAVEQTIEGRFVSPLVLGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+G + A V+ K Sbjct: 337 LLTSGSMFGIWGVFLGIPVYASAKVVIGAIFEWYK 371 >gi|227891763|ref|ZP_04009568.1| permease [Lactobacillus salivarius ATCC 11741] gi|227866422|gb|EEJ73843.1| permease [Lactobacillus salivarius ATCC 11741] Length = 376 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 118/337 (35%), Gaps = 6/337 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 F F PV+ + + + P+ I K + + T I ++V + + + FL Sbjct: 37 FFSTLFIPVIISGFLYYMLLPLVKLLMKVKIGKFKINRTGAVAIVFIAVFAIIAMSIAFL 96 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 +++++ L++K + + +S L L + S + + Sbjct: 97 LPKIIVQVENLITKSPTYVSQL--EKNFQHFLKYDSRSSWLKDIDLQSYLNRFEGSGSEM 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++++ + LF+ +DG+ + + A + Sbjct: 155 IAKFMKSLTNSLGSIISAITNITVTVLTVPFMLFYMLKDGYKLMPSILKFVPRKRTAQVE 214 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + G I I G+ Y LAGVP + G+ +IP P Sbjct: 215 AMLQDMSNTLSKYISGQAIECIFVGICTAIGYGLAGVPYALLTGIFAGATNIIPYIGPYI 274 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L + + A + I I + P ++G + + L L+ + Sbjct: 275 GLVPALILSLTDSFNTAVMAIIVCIIVQQIDGNLIYPNVIGKSVDIHPLTIILLLLVAGK 334 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GLLG+ + A+I VI K I E Sbjct: 335 IAGLLGIILCIPFYAIIKVIVKHVREVIILENESSDE 371 >gi|289168140|ref|YP_003446409.1| hypothetical protein smi_1301 [Streptococcus mitis B6] gi|288907707|emb|CBJ22544.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 388 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVINDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQV----IVALIIVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|22297616|ref|NP_680863.1| hypothetical protein tll0072 [Thermosynechococcus elongatus BP-1] gi|22293793|dbj|BAC07625.1| tll0072 [Thermosynechococcus elongatus BP-1] Length = 395 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 139/352 (39%), Gaps = 21/352 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVMC 72 I+ + + + FF P+++ L++ + + + A+ + + Sbjct: 33 ILTLNFWAFATVLKFFGPLVAVLVLASLFAFLLNYPVRWMEEQGNPRGPSAIFVFLLALV 92 Query: 73 LFIVPLLFLFYYGMLEMKELVS----KVVLANQHGIPVPRWLSDI--PGGMWASELWTKH 126 L + L + + ++L++ + + + +W+ + P + L + Sbjct: 93 LIAIIALVVVPNLFNQAQQLIARLPEWFNSSQRRLLEFGQWVDSLNLPVTVDVDALANQL 152 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + LK ++ + + +S D +++I ++ F+ + G + Sbjct: 153 L---EKLKDQLQSLAREALNLILGTLSSAV-----DVLINLILTVVLTFYLLQHGDELWN 204 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L S + +S + + S F+G ++ + G+ L + + VP + GV Sbjct: 205 GLLSWLPNTVRP---TVSETIRRSFESYFIGQLVLGLCMGIGLTTIFIFLKVPYGLLFGV 261 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I +MA++P G + ++S+ + ++ +++ + + + + ++ + P ++G Sbjct: 262 IIGVMALVPFGGTVGIISISLLVALQ-DVWLSLKVAGFAFLYQQFLENVVAPRIIGSFTG 320 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + F ++ G R GL+G+ I + +I + +E ++ Sbjct: 321 LNPVWVFLAILTGARASGLVGVLIAVPIAVVIKTFLVSVRSRLNSEEEADAT 372 >gi|255319430|ref|ZP_05360645.1| permease [Acinetobacter radioresistens SK82] gi|262379393|ref|ZP_06072549.1| sporulation integral membrane protein YtvI [Acinetobacter radioresistens SH164] gi|255303498|gb|EET82700.1| permease [Acinetobacter radioresistens SK82] gi|262298850|gb|EEY86763.1| sporulation integral membrane protein YtvI [Acinetobacter radioresistens SH164] Length = 395 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 124/346 (35%), Gaps = 11/346 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + R I+ I + L+ L K P L A +I + P+ + K Sbjct: 1 MVDRTLRRIFILAAIALLLWVLYLLKPVVIPFLMAFLIAYLFSPLVAWL-HKYHLPRWLS 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASE 121 I + + L ++ + ++ ++ + W+S+ Sbjct: 60 ISIVFIGIGILLVLAIWYVVPLVWQQLVYARDSIPAGIHWLNATFLPWVSNTFNVEQMEI 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + +T + I + ++ G+ F+ +I+ + I F+F D Sbjct: 120 DTEQIST---VVMDYIQTNYSADSIQTMLLRLAQSGLNFIQIGGTIVLIPIIAFYFLLDW 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + ++ V+ + G ++ I G+V L G+ Sbjct: 177 DRMLNSMRRLIPRPYEKNTIQVVHECHNVLGAFVKGQFLVMILLGIVYAVGLQLIGLEVG 236 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRP 298 + +G++ + ++IP ++ + + + + + + L+P Sbjct: 237 LIIGMVAGLASIIPYLGFAVGIIAAVIATLFQFGLDWTQLILVGVVFMVGQAVEGYILQP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FL+G I L + F ++ G + G G+ I + A+I V+ + Sbjct: 297 FLLGDKIGLSPVAVVFAVLAGAQLAGFFGMLIALPMAAVIVVLLRH 342 >gi|82699601|ref|YP_414175.1| ATP/GTP-binding protein [Brucella melitensis biovar Abortus 2308] gi|189023923|ref|YP_001934691.1| ATP/GTP-binding protein [Brucella abortus S19] gi|260545574|ref|ZP_05821315.1| ATP/GTP-binding protein [Brucella abortus NCTC 8038] gi|260754474|ref|ZP_05866822.1| permease [Brucella abortus bv. 6 str. 870] gi|260761520|ref|ZP_05873863.1| permease [Brucella abortus bv. 2 str. 86/8/59] gi|82615702|emb|CAJ10689.1| ATP/GTP-binding site motif A (P-loop):Protein of unknown function UPF0118 [Brucella melitensis biovar Abortus 2308] gi|189019495|gb|ACD72217.1| ATP/GTP-binding protein [Brucella abortus S19] gi|260096981|gb|EEW80856.1| ATP/GTP-binding protein [Brucella abortus NCTC 8038] gi|260671952|gb|EEX58773.1| permease [Brucella abortus bv. 2 str. 86/8/59] gi|260674582|gb|EEX61403.1| permease [Brucella abortus bv. 6 str. 870] Length = 627 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 114/328 (34%), Gaps = 24/328 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L F A + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSS-VLLPFVAGMA----LAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHL 127 + + I+ L+ + ++ + +S + P +++ + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNL----------PGYITQLQSLLANRDSEWLKKYI 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + L G F+ G +D + + F+ D + Sbjct: 124 GIDSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRM 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +DS ++I+R + + G + + G L G+ + + Sbjct: 184 VNSIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLI 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLV 301 G +++ IP A++I + + + + + FI L+P LV Sbjct: 244 GFFAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLV 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 G + L + F L G G+ Sbjct: 304 GSSVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|42523616|ref|NP_968996.1| hypothetical protein Bd2150 [Bdellovibrio bacteriovorus HD100] gi|39575822|emb|CAE79989.1| putative membrane protein [Bdellovibrio bacteriovorus HD100] Length = 345 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 113/321 (35%), Gaps = 21/321 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML- 87 F P+ A + +K ++I + MCLF++PL Y ++ Sbjct: 30 PFLMPLTLAGVFALGLNDWIEKLSAKGRLGRKSWSLIFMLLGMCLFLIPLSLAIYRIVVY 89 Query: 88 -------EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 E +++S+ + I + + LSD G A + + E Sbjct: 90 ASQPKNIETDQILSQAHNLKNYAINMLQKLSDFTGTDLA-----------GPAREVMENV 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G I G + + L I +I++ I + L Sbjct: 139 LHKIGSGAIEYSTQFLGQLPV-ILLMIFVFLISMTVMLMKAPGIKEFTLRYSP-LKADTT 196 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +K+ I K T +I + + ++G+ + G + +T ++ IP Sbjct: 197 EKLIVITKKSCWLTLFSTLVIGLIQASLIGAGSLIFGEGDFWLVLTVTFFVSFIPVIGAA 256 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + L G+ A A +D L+PF +GG + + F +VG + Sbjct: 257 PVGYLLCVLAFIGDRTGAAIGLFIVATIAGSIDNILKPFFIGGDQDISPVIGFTCVVGAI 316 Query: 321 RTMGLLGLFIGPVLMALIAVI 341 MGL GL IGPV+M L I Sbjct: 317 IMMGLPGLLIGPVVMNLFVGI 337 >gi|303239293|ref|ZP_07325821.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] gi|302593079|gb|EFL62799.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] Length = 360 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 111/315 (35%), Gaps = 4/315 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + AP L A + P+ I K + V + + V+ + L L E Sbjct: 31 YIAPFLIAFALSSLVEPLIKFLIKKVRLNRKIATVFSLLLVLVIVGGLLALLISRIYQEA 90 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L + + R + +L + + + + + L G F Sbjct: 91 LSLYDMMPQYSIEIYNNIRNYIN-KASDIYFKLPQEVTKNAEGMIADLTSTLSGIGSRF- 148 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + +I I++ +F D I + + I + Sbjct: 149 AKGVFNTAISIPQAIIFVIVTILSTYFMAADREKIYNYIKFNVPESWVDNVVSIKNDMFA 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + I+ + L + + GV ++ LG++ +I+ +P G SIY Sbjct: 209 ALFGYIRAQLILMSITFVELSIGFGIIGVRQNLLLGLLVSIIDALPILGTGGVLIPWSIY 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 I G+I L + + L +V + + P ++G I L L T + G+R +G+ Sbjct: 269 NFITGDIRMGISLIILYGVVL-VVRQMIEPKVLGQQIGLHPLVTLLSMYVGLRVFSFIGM 327 Query: 329 FIGPVLMALIAVIWK 343 IGP+ + L+ I + Sbjct: 328 IIGPITILLLKNILQ 342 >gi|260906829|ref|ZP_05915151.1| putative permease [Brevibacterium linens BL2] Length = 452 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 121/343 (35%), Gaps = 13/343 (3%) Query: 14 WMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + V+L+ L PVL AL++ P + + K A+IA + Sbjct: 74 LVVLAAVGVALWLLAKVSSVVLPVLIALLLTALLAPFTNWMVRK-GLPRVAAALIAFIGF 132 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + M +LV +V+ + WL+ P G+ AS + Sbjct: 133 IVVVSGLFTLVGQQIYSGMPDLVDQVITGFSG---ISNWLASRPFGLDAS----TISGYI 185 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + F + N + A + + + A FFF DG I + + Sbjct: 186 NNSLDAANNFFQNNSSQLLGG-AVQATSSVGTFLTGAAVCLFATFFFLYDGEKIFRWVMR 244 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L S + ++A + + +G G+P + + V+ + Sbjct: 245 LLPLPAQPIATGASERGWTTLVQYVRVQVLVAGVDAIGIGIGAAFLGIPLVIPMTVLVFL 304 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA S + L+ +A + I + L+PFL+G + + Sbjct: 305 ASFVPVVGAIASGVVAVLVALVSNGPVSALIMLGVVLAVQQIESQILQPFLMGKAVSVHP 364 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + G G++G L+A++ + + A N Sbjct: 365 LAVILAVTAGGFLFGIVGALFAVPLVAVLNTVVTYIVRAKNPN 407 >gi|11499389|ref|NP_070628.1| hypothetical protein AF1800 [Archaeoglobus fulgidus DSM 4304] gi|8928485|sp|O28474|Y1800_ARCFU RecName: Full=UPF0118 membrane protein AF_1800 gi|2648744|gb|AAB89447.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 340 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 118/327 (36%), Gaps = 19/327 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + YF ++ ++ + + P+ ++ +A + I+P+ L Sbjct: 20 TFYFFTPLLDGIVMGVVFAYVAKPVKRKIEHVGRIKASVIAT-------AIVILPISVLM 72 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +YG+++ +++ + H + + +I M E + + + Sbjct: 73 FYGLIQG---LNQAIYLITHYKVIESGILNILSKMGIEE--------GEEYVKWITSNVF 121 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I A L+ I+ F+ D + ++ S+ +++ Sbjct: 122 SILQSSIQPSAVEITKKATLLILNFFISIVVCFYALADMENFVRRTTSVVPEDRRDEFRR 181 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PIS 261 + S + G ++AI GLV + VP L + + A+IP A + Sbjct: 182 FVEEIDVTFESLWFGNFVVAILIGLVSLPFFLYFNVPFAPLLSGLMFLAALIPIFAEWMI 241 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 VS+YLL+ + L + + + LRP+ VG K+ L +GG Sbjct: 242 ILPVSLYLLLVDVGRGLSFLLIGVVFLYVLPELILRPYFVGYTSKIHPLVLMLAFIGGGL 301 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 G+ G FI P+++ L I+ Sbjct: 302 VGGISGFFIAPMIVGLATAIYNYYTKE 328 >gi|157693145|ref|YP_001487607.1| hypothetical protein BPUM_2381 [Bacillus pumilus SAFR-032] gi|157681903|gb|ABV63047.1| hypothetical protein BPUM_2381 [Bacillus pumilus SAFR-032] Length = 354 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 118/325 (36%), Gaps = 13/325 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LK P+L A+ I + +PI + TVS++ ++++ + Sbjct: 36 FLLLKAVLIPLLIAIFISYLLYPIVERLHAGGLPR--------TVSLLLIYVLFFGGIGL 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ ++ ++ + + + + W L I+ Sbjct: 88 AVYKGAPVMIKQLNELSEQIPVLAETYNGALSHIHHHTSHWPDGLHDRLDRLIVQSETYA 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG + + + LDY L + +F+ +D ++ + L F Sbjct: 148 ANGAERMILSC----KVLLDYALVAALIPFLVFYMVKDMNTMKRAAWYLTPPSFRKRGHA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + + G ++ G WL +P + LG++ +IP PI Sbjct: 204 FVKAVDESLGNYIRGQLLVCSFIGGAATIVLWLFHIPYPLVLGMLIGATNVIPYFGPIIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++++ ++ + + + A+ F+ L P +VG + + + L+ G Sbjct: 264 AIPAVFIAFTISVKSVIIVLITVAVLQFLESNVLSPIIVGRSLHMHPVVIMLVLLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 GL+G+ + A+I VI + I+ Sbjct: 324 FGLIGMILAVPTAAIIRVIIVQYIL 348 >gi|238760499|ref|ZP_04621635.1| permease perM [Yersinia aldovae ATCC 35236] gi|238701296|gb|EEP93877.1| permease perM [Yersinia aldovae ATCC 35236] Length = 354 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 121/358 (33%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I I+ LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLAILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ Sbjct: 68 WAATIVLVVFGSITLLAVFVVAPTVWQQGNNLIS----------DMPKMLNKFNAFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + + + L + +I + + LFF Sbjct: 118 PARYPALVDAGIVDMMAENLRGKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVIVGIATYLVFFIMGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFAAYLVVQALDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPDEFIPDAD 354 >gi|229815208|ref|ZP_04445544.1| hypothetical protein COLINT_02254 [Collinsella intestinalis DSM 13280] gi|229809218|gb|EEP44984.1| hypothetical protein COLINT_02254 [Collinsella intestinalis DSM 13280] Length = 455 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 110/309 (35%), Gaps = 8/309 (2%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 I F + PI + + + A+I + V+ F++ + + L+ + Sbjct: 49 GAISAFMASPIVNFLERRGLPRAGG-ALIGLLVVIVGFVLLFALVIPMVTGQ---LIDLL 104 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A + W + E + + +SL ++ + + Sbjct: 105 RDAPAKLAALSSWAMRMENKFAIVEHLNDVV-NIESLFASAQDMINQALSGLLSAVRDGI 163 Query: 157 G---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 ++ + F+ D I++++ + ++ + ++ + + Sbjct: 164 VPMVNNIASMVFTVFLGFVLAFWLACDYPRINEEICRILPEDKADDYRLMVAVLSRSVGG 223 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 I ++ +G + + + G P + +G+++ I+ +IP P ++ + + Sbjct: 224 YLRSTLINSMIQGFLAFVGFMIVGHPYAITMGILSGILNIIPVVGPSISAIIATLIALVY 283 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A + + I D + P + +++ + + LV G G +G+ + Sbjct: 284 SPIMAIWTMVMAMLSQNITDNVIAPKINQSTMQVHPVLSLTALVVGSTFGGAIGMIVALP 343 Query: 334 LMALIAVIW 342 L+A+I ++ Sbjct: 344 LVAVIKSLF 352 >gi|108562971|ref|YP_627287.1| membrane protein [Helicobacter pylori HPAG1] gi|107836744|gb|ABF84613.1| membrane protein [Helicobacter pylori HPAG1] Length = 349 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 137/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL I +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + V+IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|257069438|ref|YP_003155693.1| putative permease [Brachybacterium faecium DSM 4810] gi|256560256|gb|ACU86103.1| predicted permease [Brachybacterium faecium DSM 4810] Length = 477 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 111/335 (33%), Gaps = 21/335 (6%) Query: 14 WMIMFIILVSLYFLKGFF------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 W ++ +I S L G PVL A+++ P+ T + +A Sbjct: 32 WRLIVVIAASALILWGLLQITTLVIPVLIAVLLAAMLNPVVKVLTRYTFLGRTAASGVAL 91 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + ++ K V Q WA+ + Sbjct: 92 LGLLLVIAGMFTLAGRQLFAQFADIQEKAVTGFQSLTD------------WATSTFQIDA 139 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T L+ N + A + + I+ + ALFFF G SI + Sbjct: 140 PMVDAAIDEGLTQLQDNSDQLVSG-ALGTAAVLGNVATGIVICLFALFFFLAGGSSIWRW 198 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGV 246 + L + R K + + ++A + + G+ V + + Sbjct: 199 VVGLLPPAARVPTHEAFRRGWKALSAYIRTQILVAGVDATGISIGMVALGLGSYAVPIWL 258 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + + +P I A+++ L L+ + A + + L+PFL+G + Sbjct: 259 LVFLFSFVPLVGAIVSGAIAVLLVLVLNSWIGAIIMLAIVLVVQQAESNILQPFLMGKAV 318 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +L L G+ GV + G L+A + Sbjct: 319 ELHPLAVLLGVAAGVMVANIAGALFAIPLIAFVNA 353 >gi|125973528|ref|YP_001037438.1| hypothetical protein Cthe_1013 [Clostridium thermocellum ATCC 27405] gi|125713753|gb|ABN52245.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] Length = 360 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 4/316 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L +FAP L A I P+ + K + F A+++ + + + + LL LF Sbjct: 28 LAIYFAPFLIAFAISSMIEPVIRFLMKKLKFRRKFAALVSLLLGLSMIAILLLMLFSKLY 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ L S + L I G+ ++ S + S + ++ + Sbjct: 88 NEITSLSSSQPEFWKEAYQNISNL--INRGLNIYFGLPSEVTAQISSMVSSLSNSVSSLV 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + + + I I++ +F D I + I Sbjct: 146 DSFVKGIYNTAISIPQMVIFIFVTILSTYFISSDRDRIYDYIKDNVPDALLNKIIDIKDS 205 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 + + I+ L + + GV + LG++ + + P G Sbjct: 206 MFTALFGYVKAQLILMTITFCELSLGFTIIGVKRPILLGLVISFIDAFPVLGTGGVLVPW 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IY + +I L + I L ++ + + P +VG I L L T + G++ GL Sbjct: 266 AIYEFLTKDIRMGVSLLILYVIVL-VIRQMIEPKVVGEQIGLHPLMTLITMYLGMKFFGL 324 Query: 326 LGLFIGPVLMALIAVI 341 GL +GP++ + I Sbjct: 325 PGLILGPIVTLIFKNI 340 >gi|15964938|ref|NP_385291.1| putative permease protein [Sinorhizobium meliloti 1021] gi|15074117|emb|CAC45764.1| Putative permease [Sinorhizobium meliloti 1021] Length = 371 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 112/329 (34%), Gaps = 10/329 (3%) Query: 3 ETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +M + I W+++ + + L P L+ + + + P+ + S Sbjct: 6 SSMGLQRQIFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLE-RLGLSRLM 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + + + L+ + + + E + K+ W + Sbjct: 65 ATIAILVAFVVVLALSLMIIVPLVVTQAAEFIQKMPGYITRLQEFLTDSQSTLLPDWLAG 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T + L +FL T + + G+ L+ + + F+ D Sbjct: 125 QMTTIKQNSAKLLEQGASFLGT-----LFQQIWNSGLALLNILSLFVITPVVAFYLLLDW 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++DS + ++I+R + I G + + GL G + G+ Sbjct: 180 DRMVDRVDSWIPRDYVEVVRQIARDMNTTIAGFVRGQGSLCLILGLYYGIGLTMVGLNFG 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ +++ IP + +++ + + + + F+ L+P Sbjct: 240 LLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYVWILLVLAVFFSGQFLEGNILQP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LVG + L + F L+ G +G Sbjct: 300 KLVGKSVGLHPVWLMFALLAFGALFGFVG 328 >gi|319950224|ref|ZP_08024151.1| permease [Dietzia cinnamea P4] gi|319436128|gb|EFV91321.1| permease [Dietzia cinnamea P4] Length = 511 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 121/336 (36%), Gaps = 23/336 (6%) Query: 17 MFIILVSLYFLKGFFAPVLS--------ALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+LV+ + + L ALII WP+ + K T A+++ + Sbjct: 38 LAILLVAGWLISR-IGGALWVGILPILLALIISTVLWPVTGWMVRHKVP-KTLAALLSII 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + + + +L + A V WL P + +L Sbjct: 96 GSLGLLTGVIALIAPSIVSQSVQLADQTSEAITE---VQDWLRGPPLNIRDEQL------ 146 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + L+ G I + ++++ +++ FFF +DG + Sbjct: 147 --DGLLDQLSSTLQDRGDQ-IASGVFSGVSAVGSFVVTLVLVLVLTFFFIKDGPRFLPFV 203 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + I++ + +++G A + GVP AL VIT Sbjct: 204 RRNTGRTAGRHLTEVLTRAWNTLGGYIRAQAIVSFVDAVLIGLALVILGVPLAWALAVIT 263 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I IP GA + + L+ A + + + L+P L + L Sbjct: 264 FIAGFIPIVGAFTAGALAVLIALVANGFTTAIIVLVVIIAVQQLEGNVLQPILQSRAMNL 323 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G G++G F+ ++A++AV+ + Sbjct: 324 HPGVILLGVAAGSTLFGIIGAFLAVPILAVVAVVIR 359 >gi|307637250|gb|ADN79700.1| acid membrane antigen A [Helicobacter pylori 908] gi|325995842|gb|ADZ51247.1| Acid membrane antigen A [Helicobacter pylori 2018] gi|325997436|gb|ADZ49644.1| putative membrane protein [Helicobacter pylori 2017] Length = 349 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 139/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + S+ + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y G + E+ + + +WL +E + Sbjct: 59 CVLVLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKVSSYIGKYSLKLVTDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L G++ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 286 IKKRIFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|281492409|ref|YP_003354389.1| permease [Lactococcus lactis subsp. lactis KF147] gi|281376073|gb|ADA65564.1| Permease [Lactococcus lactis subsp. lactis KF147] Length = 371 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 107/314 (34%), Gaps = 4/314 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P + A + + P+ + K I + ++ + I + + + ++ Sbjct: 42 FVPFIIAGFLYYVFNPVVTFMEEKLRIKKVLGIFIVLLLILGMIIFAIASVIPSLISQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE-TFLKTNGIDFI 149 L + + V W+ + ++++ + + K+ T + N ++ I Sbjct: 102 SL---INATGKAYPQVRAWIEGLQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSI 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 I + +I + I L++ +DG I L ++ + Sbjct: 159 TVSVGSIVGIITSIVMVMILVPILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNH 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I G+ + A+ +V+ Y + G+P + + +IP P I Sbjct: 219 TISRYISGVALDALLVFIVVFIGYMVLGIPYAFLFALFAGVTNLIPYVGPYIGVLPMIVT 278 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + A ++ + + + P +VG +K+ + ++ G+LG+ Sbjct: 279 VAFNRPVTALIAVIYVLVLQQLDGNLVYPKIVGSAVKVHPVTVMILMLISGSLYGILGMI 338 Query: 330 IGPVLMALIAVIWK 343 I L+ I K Sbjct: 339 IAVPAYCLVKEIVK 352 >gi|238756097|ref|ZP_04617419.1| permease perM [Yersinia ruckeri ATCC 29473] gi|54208730|gb|AAV31125.1| putative permease [Yersinia ruckeri] gi|238705703|gb|EEP98098.1| permease perM [Yersinia ruckeri ATCC 29473] Length = 354 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 123/353 (34%), Gaps = 18/353 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLVAIVLAYLLEWPTTR--LQRMGCSRL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I + + ++ +L + + LV+ +P+ L+ Sbjct: 68 WAASIVLILFGGIALLLILVVAPTAWQQGINLVA----------DMPKMLNQFNAYAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E D + +F+ + L + +I + + LFF Sbjct: 118 PSRYPALVDAGIVDMMAENMRGKLSSMGDSVVKFSLASIVGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + ++ + + + I + G + + G+V +++ + Sbjct: 178 KDKDQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVMEMVIVGIVTYLVFFILDM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I L + + + L Sbjct: 237 RYALLLSVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLIVAYLVVQALDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P L + L L ++ G G+F L L+ + Sbjct: 297 VPILFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|320323392|gb|EFW79480.1| permease, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 357 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 131/343 (38%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVAVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKICGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 347 >gi|317129332|ref|YP_004095614.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315474280|gb|ADU30883.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 353 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 139/342 (40%), Gaps = 4/342 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + I + + + + LYF+ P++ ALI PI + I + + S + Sbjct: 1 MATSASIKKYIYIVLGIIVAALLLYFVLPVSVPIIVALITALFLAPIVNVLIRRAKLSRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 I +S + + + + FL + ++ + + N+ +L++I Sbjct: 61 LAVFIVFISFVLVISLIVYFLLTRAITQLNSFIENLPYTINEIAYAWTTFLNNIESQFGQ 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L ET + ID + + + Y +S++ +IAL+ F Sbjct: 121 YSPDLRQEIDDVVMGFLIETRMNLQEIDLVG-HVTSILIKIPSYIVSLLVYLIALYLFLM 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ S ++ + V+ F +++I +V W+ Sbjct: 180 DLPRLKEKAMSYMTDKTAEKVTFMASRLSYVVFGFFKAQFLVSIIIFVVTLIGLWIIAPE 239 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++ ++ IP G+ ++Y +I GN A L + AI L + +T+ P Sbjct: 240 VAIIMSIVIWVIDFIPIIGSIAVLAPWALYHIIAGNTALAVQLLVLAAILL-TIRRTVEP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++G I L L T L G++ +G+LG +GP+++ L Sbjct: 299 KVMGHHIGLSPLATLISLFIGLQLLGVLGFILGPLVVILFTS 340 >gi|145225428|ref|YP_001136106.1| hypothetical protein Mflv_4850 [Mycobacterium gilvum PYR-GCK] gi|145217914|gb|ABP47318.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] Length = 394 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 104/301 (34%), Gaps = 14/301 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+ AL++ WP +K ++ + + + + + + + + Sbjct: 55 VLPLALALVVCTVLWPPVRWLRNK-GVPPAAAVLVVLLLAVGVLAGVVAAVAPAIVEQSQ 113 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL + + V WL P + ++L S L ++ Sbjct: 114 ELAEQATAGI---VQVRDWLGGPPLNISEAQL--------NSGVAAITDRLNSSSAQIAS 162 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + G +++ I+ FFF +DG L + ++ V Sbjct: 163 GVFTGVGAAT-SALVTLFAAIVVTFFFLKDGPGFIPWLRRTVGQPAAPHLAEVLDRVWTT 221 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + +++ + +++G + GVP AL +IT I IP GA ++ + Sbjct: 222 LGGFIRTQALVSFVDAVLIGIGLVVLGVPLAYALAIITFIGGFIPIVGAFVAGGLAVLIA 281 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ +A + + L+P+L +KL + + G T G++G F Sbjct: 282 LVSNGPVDALIVLGIIVAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGASTFGVIGAF 341 Query: 330 I 330 + Sbjct: 342 L 342 >gi|297543538|ref|YP_003675840.1| sporulation integral membrane protein YtvI [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841313|gb|ADH59829.1| sporulation integral membrane protein YtvI [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 354 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 122/354 (34%), Gaps = 11/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + I + +++ + + Y + F P + ALI P + K + Sbjct: 1 MNNYLKYSDIIKKIILIVSVFIIFYLVIFKIIPFLMPFVMALIFAVIIDPGVNFLEKKLK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPG 115 + I + ++ + + + + E+ L AN + + I Sbjct: 61 VPRGLASFILLLILIGVIGSLIAIIVTQLIYELSSLAEISTNYANTINDAILNLVDRI-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 +++ + S + + + F ++ + ++A F Sbjct: 119 -RTYYISLPPNITSLIESNMYSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATF 177 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D I + + + K I + K + I + L + + Sbjct: 178 FISKDKNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVI 237 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVD 293 G LG+ I+ +P G+ ++Y ++I N L + + + +V Sbjct: 238 IGFDYPFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVV-VVR 296 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 297 QMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|289207740|ref|YP_003459806.1| hypothetical protein TK90_0555 [Thioalkalivibrio sp. K90mix] gi|288943371|gb|ADC71070.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. K90mix] Length = 364 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 110/313 (35%), Gaps = 6/313 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+ V+LY L P L AL+IG+ P+ + + S T ++ V VM Sbjct: 23 LVILGVALYLLAPILTPFLIALLIGYLFNPLVTRLAVRTGGSRTLATLVIFVLVMLGLAG 82 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L L M + + L+ + R + G L L + Sbjct: 83 LVLVLIPLAMAQFERLMLLLPEVIAWFDEQVRPWIEQQAGDRLPALEPAALQELLAEHWR 142 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + ++ S + L+ L + + F+ RD + L L + Sbjct: 143 EAGGLAGGLLHWLGSSTSALVLGVLNLVL----IPVVSFYLLRDWPRLVAGLHDLLPRAW 198 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + + G ++ + GL +AGV +A+G+I +++ +P Sbjct: 199 RDPVTRFAVESDNTLGAFLRGQLLVMLALGLFYAITLSVAGVQMGLAIGLIAGLVSFVPY 258 Query: 257 GAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I A + L + + A+ + L P+LVG L + F Sbjct: 259 VGVIVGIVLATAAVLFQGDGWTLLLAVLVIFAVAQVLESVVLTPWLVGDRTGLHPVAVIF 318 Query: 315 GLVGGVRTMGLLG 327 ++ G + G G Sbjct: 319 AVLAGGQLFGFFG 331 >gi|154497012|ref|ZP_02035708.1| hypothetical protein BACCAP_01305 [Bacteroides capillosus ATCC 29799] gi|150273411|gb|EDN00539.1| hypothetical protein BACCAP_01305 [Bacteroides capillosus ATCC 29799] Length = 424 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 125/342 (36%), Gaps = 11/342 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ ++ L G P + AL++ + P + S L+++ + + + Sbjct: 51 ILVLLFLVYGAPPLLGLLMPFVLALVLTWILNPAIVKVQRRFGGSRKALSLVMLILIFTI 110 Query: 74 FIVPLLFLFYYGMLEMKELVS-----KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L L Y + E+ LV + + +LS + G+ ++ + Sbjct: 111 AGGILAALVYSIVSEVASLVMNWPSIWADSLQPAIVGLEEFLSGLFIGLP-DQVSQGATA 169 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + + A F + ++++ ++A +F D + + Sbjct: 170 ALDKLVAWLNEMIPS-LLSHAGSAAGSFAFSIPSFAVALVIFVMATYFIASDYPRLRLMV 228 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R I+++ +L + + P V L + Sbjct: 229 TDRLSPSVRDFFGSVKRTAVAAFGGYVKAQLILSVVIFFILLVGFVVIRQPYSVLLAFLL 288 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ IP G+ ++ L G +A + +WG I LF + P +VG Sbjct: 289 AVLDFIPIVGSGTVMVPWAVADLFLGEYRHAVELMVIWGIIALFR--RGAEPKVVGDQTG 346 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + + + G++ G+ G+ +GPVL ++ I + ++ Sbjct: 347 LSPILSLISIYVGMKIAGVAGMILGPVLCMVVINIGRLGVLD 388 >gi|325962604|ref|YP_004240510.1| permease [Arthrobacter phenanthrenivorans Sphe3] gi|323468691|gb|ADX72376.1| putative permease [Arthrobacter phenanthrenivorans Sphe3] Length = 444 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 121/344 (35%), Gaps = 17/344 (4%) Query: 15 MIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ + ++ L PV+ A ++ P+ + S + V + Sbjct: 54 LILLVGGALVWLLSKISFLIIPVMVAALLAGLLNPVVGWL-KRYRLPSGLAVAVTVVGFI 112 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L L + + EL S+ + + + WL+D P + A+++ Sbjct: 113 GLIAGSLALVGRQLVSGFGELWSEALAGVK---QIQDWLADGPLHLTAAQMDQYLKEATT 169 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L+ + + I A FG + +I + L FF +G I L L Sbjct: 170 ALQDNTSS---------IVSGALSFGSTAGHFAAGLILALFILIFFLLEGDRIWAFLVRL 220 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A R + S +A + + +G+ + GVP + L V+ I Sbjct: 221 LPRKARAAAFGAGRKGWTSMVSYARIQMFVAFVDAVGIGAGAAIIGVPLALPLSVLVFIG 280 Query: 252 AMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + A+++ L L+ NA + + + L+P ++G + L + Sbjct: 281 SFIPIVGALVTGAIAVLLALVANGPINALIMLGIVLLVQQLESHILQPLVMGKAVALHPV 340 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G ++A+ + E+++ Sbjct: 341 AVILSVAAGSYLAGIPGALFSVPILAVANSAVRYIAARTWEHEQ 384 >gi|4098497|gb|AAD00285.1| putative membrane protein [Streptococcus mutans] Length = 395 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 122/325 (37%), Gaps = 3/325 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A ++ L+I + + + E T + T+ + + + + + + Sbjct: 55 LLSFLAVIMLPLVISALLYYLLKPIVDFIEIRGTSRVMAITIVFVIIAGLLVWGIANFFP 114 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++L S + + V +S + + + + + + + + Sbjct: 115 MLNEQLTSFIKYLPSYVRSVDAQVSKLLRNDLLASFRPQIENAVTNFSQKAVDYAEPFSK 174 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + +A F + ++II +F+ RD + + S +I Sbjct: 175 GAV-TWAGNFASLIARVTVAIIISPFIVFYLLRDSSKMKEAFVSYLPTKMRQPIHRILGD 233 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 V + + + +AI G + + + G+ V G+I + MIP G+ ++ V Sbjct: 234 VNRQLAGYVQRSSTVAIIVGFMFSIMFTIIGLRYAVTFGIIAGFLNMIPYLGSFLATIPV 293 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I L++G + L +E I + + P ++G + + + F L+ G+ Sbjct: 294 FILALVEG-PVKVVKVALVFIVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTAGSMFGV 352 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 G+F+G + A I V+ KE K Sbjct: 353 WGVFLGIPVYASIKVVVKEIFEWYK 377 >gi|78048658|ref|YP_364833.1| putative permease (PerM) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926062|ref|ZP_08187425.1| putative permease [Xanthomonas perforans 91-118] gi|78037088|emb|CAJ24833.1| putative permease (PerM) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325543520|gb|EGD14940.1| putative permease [Xanthomonas perforans 91-118] Length = 388 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 124/330 (37%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S ++ V LF++ L+ Sbjct: 25 VLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERA-GRSRNVAVMLVFVLATLLFVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMIERQIMTLIDALPQMRNWAIG-----TAIPWLEAKTGMQLMAWLDPERLIDWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 ++++ V+ G ++ + G + + + G+ + +G+I +++ IP Sbjct: 199 GTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIAGLISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTF 313 I ++ + +G +++ L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGLDLKLLVGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|270292832|ref|ZP_06199043.1| membrane protein [Streptococcus sp. M143] gi|270278811|gb|EFA24657.1| membrane protein [Streptococcus sp. M143] Length = 387 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 122/350 (34%), Gaps = 11/350 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + L++ + Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLKDADMVINDLVTKRLPDDFRPQLEQVLANVSTEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 IWASKISSQAVNWVSAFISSVSQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPAGEVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI------WKESIMAIKENKEKISSN 359 L+ G+ G+ +G + A V+ W + + + E E+I S Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKKVSGLYEEGEEIKSE 386 >gi|255522001|ref|ZP_05389238.1| membrane protein [Listeria monocytogenes FSL J1-175] Length = 318 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 107/291 (36%), Gaps = 6/291 (2%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F+ K++ ++ ++ + L ++ ++ L ++ EL + Q +WL Sbjct: 5 FLEKRKVPRLLSVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQ---DFEKWL 61 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D+ +L + +S + + +D + + + ++ + Sbjct: 62 QDLSNNSALKDL---DIKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTV 118 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +F+ ++DG + + K+I + + K I + I + GL Sbjct: 119 PFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTF 178 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G P + G I +IP P A ++ + + + A + + I Sbjct: 179 IGYLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQ 238 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 239 IDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTI 289 >gi|167629939|ref|YP_001680438.1| domain of unknown function, putative [Heliobacterium modesticaldum Ice1] gi|167592679|gb|ABZ84427.1| domain of unknown function, putative [Heliobacterium modesticaldum Ice1] Length = 365 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 122/328 (37%), Gaps = 15/328 (4%) Query: 8 PQGIMRWMIMF----IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 P+G R +++ I+L+ Y L+ P A ++ + +P Sbjct: 27 PKGRWRILLVAGFWAIVLLLSYLLRQTLVPFAVAFVLAYLLYPGVVWLE-----KGGLSR 81 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V++ ++V + L +GM + EL V Q+ + WL+ I ++ Sbjct: 82 VVSILAVFAVVFGGFASLIAFGMPRIFSELNRFSVQLPQYTQQMQAWLARI-----QQDM 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 I R+ + + I+ + + F+F RD Sbjct: 137 IQSGFPPGIQQVWSDTLARGEATILAAVRWLLESAVSLAENAFDIVLIPVMSFYFLRDWE 196 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +I + +L A+ + + V +++R+ ++A+ G++ L G+ + Sbjct: 197 AIGKGSLNLVPQNLRAHVQIVGGEVNRILRAVVRCNFLMALVVGVLTTVGLTLIGLEYSL 256 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G+I I +IP P+ ++ + + + A L + I L P L+G Sbjct: 257 LIGIIAGIADLIPYFGPLIGMVPALVVGLLESPRLALYAVLIMIVVQQIEANLLSPKLLG 316 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ G G++GL + Sbjct: 317 DSVGLHPLAVIFALLAGGHLFGIVGLLL 344 >gi|49474324|ref|YP_032366.1| permease protein [Bartonella quintana str. Toulouse] gi|49239828|emb|CAF26221.1| Permease protein [Bartonella quintana str. Toulouse] Length = 403 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 106/330 (32%), Gaps = 13/330 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + ++ + P ++ +++ + PI + K F ++ Sbjct: 45 MKKQIFFWVGTLVFFILFMLVFGSILLPFVAGIVLAYFLNPIVQ-LLEKFGICRVFGTIL 103 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +F+ L+ L ++++ VS + + + + Sbjct: 104 ITLFIIFVFVAALIILIPITSWQIQQFVSNGLPVYINR------IQTFFVEHDFDWVRRY 157 Query: 126 HLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S P L + L + I + + G ++ + + F+ D Sbjct: 158 FGSDPNELHSNIKGLLGQSSDFITSLLNSLLKSGKSIVNIVSLFVVAPVVAFYMLLDWPR 217 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +DSL + I + + I G + + G + G+ + Sbjct: 218 MVTAVDSLIPRDHLETVRSIFHEMDRAIAGFVRGQGTVCLILGGYYSIGLTITGLNFGLL 277 Query: 244 LGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G+ +++ +P + V+ N + + I FI L+P Sbjct: 278 IGMFIGLISFVPYIGTMSGFVLSVGVAWVQFYPNNWGWIIVVIVIFLIGQFIEGYILQPK 337 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LVG + L + F L G G+ Sbjct: 338 LVGSSVGLHPVWLMFALFAFSSLFGFTGML 367 >gi|289434177|ref|YP_003464049.1| hypothetical protein lse_0810 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170421|emb|CBH26961.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 378 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 118/333 (35%), Gaps = 14/333 (4%) Query: 16 IMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++FI+L Y F P+L A + + P+ +K +I + Sbjct: 24 VVFILLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKRKVPR-ILSVIIIFI 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L I+ ++ L ++ EL + Q +WL + + L Sbjct: 83 AFIALIILAIMQLGPTLADQVTELAKAIPGYWQ---DFEKWLQGLSNNSSLQGV---DLK 136 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +S + + +D + + + ++ + +F+ ++DG + Sbjct: 137 AELEKLNISLPKIMSVVVDGVASSFGAIVSFVSGFVMILVTVPFIVFYMFKDGHKFVESS 196 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K+I + + K I + I I G+ Y + G P + G+I Sbjct: 197 GKFFPAAIRTEAKQIIKEMNKTISTYISSQAIDCIVVGIFTFVGYLIIGQPYALLFGLIA 256 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +IP P A ++ + + + A + + I + L P+++G + + Sbjct: 257 GATNIIPYLGPFIGAAPAVIVALFTSPLQALLVIIVVTIVQQLDSNLLSPYIMGKSLSIH 316 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L+ G+ G+ +G + A++ + Sbjct: 317 PLTIIIILIVAGNLAGIFGMILGVPVYAVVKTV 349 >gi|262373133|ref|ZP_06066412.1| PerM family permease [Acinetobacter junii SH205] gi|262313158|gb|EEY94243.1| PerM family permease [Acinetobacter junii SH205] Length = 397 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 130/355 (36%), Gaps = 11/355 (3%) Query: 6 LNPQGIMRWMIMF---IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + Q + R I+ ++L LY LK P + A I + P+ + + K Sbjct: 1 MQDQVLRRIFILAGLALLLWVLYLLKPVVLPFVGAFFIAYLFSPLVDTLV-KFRLPRWLA 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASE 121 + V + L V L FL ++ + W+S Sbjct: 60 ISLVFVGIGVLLTVVLWFLAPLVWEQLIYARDSIPAGIHWINATFLPWVSHT---FNVVP 116 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ +T + I + ++ G+ F+ +I + I F+F D Sbjct: 117 MEIDTEQLSKAVMDYIQTNYSADSIQTMALRVAQSGLNFIQLGGIVILIPIIAFYFLLDW 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L + A I R V+ + G ++ + G+V L G+ Sbjct: 177 ERMLDSLRRLIPRPYEASTLTIVRECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVG 236 Query: 242 VALGVITAIMAMIP---GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G++ + ++IP G I ++ + + + I + L+P Sbjct: 237 LIIGMVAGLASIIPYLGFGVGIIAAVIATLFQFGIDWMQLLLVGVVFMIGQMVEGYILQP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FL+G I L + F ++ G + G LG+ I + A+I V+ K + + ++ Sbjct: 297 FLLGDKIGLSPVAVVFAVLAGAQLGGFLGMLIALPVAAVIVVLLKHARNNYERSR 351 >gi|50085703|ref|YP_047213.1| PerM family permease [Acinetobacter sp. ADP1] gi|49531679|emb|CAG69391.1| putative permease (PerM family) [Acinetobacter sp. ADP1] Length = 396 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 117/336 (34%), Gaps = 20/336 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF------IVPLLFL 81 K P + A +I + P+ SK I + + L +VPL++ Sbjct: 26 KPVVIPFVGAFLIAYLFSPLVEKL-SKIGLPRWLSISIVFIGIGVLLTWAMWYVVPLVWQ 84 Query: 82 -FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 Y + + V W+S + + +T Sbjct: 85 QLMYARDSIPSGIHWVNAT------FLPWVSHT---FNVERMEIDTDQISTVVMEYIQTN 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + I + ++ G+ F+ +I+ + I F+F D + L L + Sbjct: 136 YSADSIQTMALRLAQSGLNFIQIGGTIVLIPIISFYFLLDWDRMLNSLRRLIPRPYEEST 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +I V+ + G ++ + G+V L G+ + +G++ + ++IP Sbjct: 196 LRIVYECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFA 255 Query: 261 SFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 ++ + + + + I + L+PFL+G I L + F ++ Sbjct: 256 VGIIAAVIATVFQFGVDWMQLALVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVL 315 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + G LG+ I + A+I V+ + A + + Sbjct: 316 AGAQLAGFLGMLIALPVAAVIVVLLRHLREAYEHTQ 351 >gi|119960690|ref|YP_948306.1| permease [Arthrobacter aurescens TC1] gi|119947549|gb|ABM06460.1| putative permease [Arthrobacter aurescens TC1] Length = 430 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 108/320 (33%), Gaps = 11/320 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +++AL I P+ S+K + +I+ +++ L + ++ E+V Sbjct: 122 IVAALFIALGLDPVVRWLESRKVPRPAGI-LISVSALVLAVAGFFATLIPTIVEQVSEIV 180 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + P W+ + ++ + L + + I Sbjct: 181 RQA----------PEWIRGFLDSDFFRNADSQFGVRDRITTELDKFVKDPEAMGGIFGGV 230 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 FG + + +++ +F S+ + L + +S + + + Sbjct: 231 VGFGSTVANGLFGSLIVLVLSLYFLAALPSMKKWAYRLAPRSRRPRVEALSEAITDSVGN 290 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G +A+ + + G+P V L + A++A IP + V I + + Sbjct: 291 YVIGQVCVALLNAIFAFILMTILGIPFSVLLAFVVALLAFIPLVGGMIAAVVVILVALTA 350 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + L + P ++ + +P ++ G +G+LG I Sbjct: 351 GWQTAVVYAIAYFAYLQFEAYFISPRIMQRAVAVPGAVAVISVIAGGSLLGVLGALIAIP 410 Query: 334 LMALIAVIWKESIMAIKENK 353 A I ++ KE + ++ Sbjct: 411 TAAAIMLLMKEVFIVRQDRH 430 >gi|114332236|ref|YP_748458.1| hypothetical protein Neut_2276 [Nitrosomonas eutropha C91] gi|114309250|gb|ABI60493.1| protein of unknown function UPF0118 [Nitrosomonas eutropha C91] Length = 363 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 122/345 (35%), Gaps = 8/345 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ I+ +Y L P L A I + PI + +K T V + + +FI Sbjct: 17 LIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVRKVPR-TLSTVFVMLMAIGIFI 75 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + E+ L+ ++ IP + + + Sbjct: 76 TMILIMLPLFEKEISRLIERIPSFLDMLSNRL-----IPWVEGVFNIELQIDVDMLKDLL 130 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G++ L + +++I + + LF+ RD + +Q L Sbjct: 131 AEHWQSAGGVAARALPTLKSGGLVILGFLINLILVPVVLFYLLRDWNILIKQAGELIPPA 190 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +SR V+ G + + + WL G+ + +G+++ ++ +P Sbjct: 191 WQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSLPIGLLSGVLVFVP 250 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTF 313 I+ ++ + + ++ + +W I + + P LVG I L + Sbjct: 251 YLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRLVGERIGLHPVAVI 310 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F L+ + G +G+ + + A++ V+ + E E + Sbjct: 311 FSLMAFGQLFGFIGILLALPISAILLVLLRHLHTQYMEVMEDDET 355 >gi|163740901|ref|ZP_02148294.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161385892|gb|EDQ10268.1| membrane protein [Phaeobacter gallaeciensis 2.10] Length = 381 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 121/342 (35%), Gaps = 18/342 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I V L+ L P + I + PI + S T + TV + LF + Sbjct: 42 AVVIAVVLWALGDVLLPFVLGAAIAYLIDPIADRLEA-MGLSRTAATAVITVFAVLLFAI 100 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + +M +L + A ++ + + + Sbjct: 101 ILLVVVPTLIYQMLDLAKVLPEAFKNL------------RDFVQQQAPSLFDEGSRAQQT 148 Query: 137 SETFLKTNGIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +T I G ++ + + + + + D + ++D L Sbjct: 149 IVSIAQTLQSKAIGVLEGVVGSAVSLVNVLILFVIVPVVAVYLLLDWDRMVARIDELLPR 208 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + KV+ S GM + + G A L G+ +A+G I ++ I Sbjct: 209 DHAPTIRELAARIDKVLASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLVTFI 268 Query: 255 PGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L + G+ ++ + AI I L P LVG + L + Sbjct: 269 PYLGALIGGALAIGLALFQFWGDWWSIGMVAGVFAIGQVIEGNLLTPKLVGNSVGLHPVW 328 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + VI + + +++ Sbjct: 329 LLLALSVFGALFGFVGMLIAVPVAAALGVIARFLVEQYLDSR 370 >gi|94498879|ref|ZP_01305417.1| hypothetical protein RED65_08834 [Oceanobacter sp. RED65] gi|94428511|gb|EAT13483.1| hypothetical protein RED65_08834 [Oceanobacter sp. RED65] Length = 356 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 126/340 (37%), Gaps = 9/340 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I L+ P + + + P+ + S T I + ++ + + Sbjct: 18 IALIGWLFANLEPVLMPFIVGALFAYLGDPVADRLEN-IGLSRTSAVCICFLVILAVIAI 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + ++K L + V WL+ G + + + + Sbjct: 77 FLLLVVPTIVHQVKVLYGFLPDILNWLQKNVMPWLNSNMGIKVED----FNFQNIREEIV 132 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L+ D + + G F+ + ++ + + F+ RD I ++ L Sbjct: 133 QNWGGLQKVMKDVLAGIGNSTGS-FVAFLANLAIVPVVGFYLLRDWDVIMEKALKLLPGR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ V+ + F G + ++ G WL G+ +G+ + +++P Sbjct: 192 YQQATHELAAECDDVVGAFFKGQLWVMTALAIIYGFGLWLVGLKLAFLIGLFAGLASIVP 251 Query: 256 --GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G A A+ G + + + + I L P LVG I L + Sbjct: 252 YLGAALGIVAAMVAGAFQFGMGWELLLIGVVFGVGQAIESMILTPILVGDKIGLHPVAVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G + G +G+ + + A+IAV+ + + K+++ Sbjct: 312 FAIMAGGQLFGFIGVLVALPVAAVIAVLLRHAHDFYKDSE 351 >gi|209964849|ref|YP_002297764.1| permease protein, putative [Rhodospirillum centenum SW] gi|209958315|gb|ACI98951.1| permease protein, putative [Rhodospirillum centenum SW] Length = 387 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 123/346 (35%), Gaps = 17/346 (4%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + + WM+ + + + ++ L P ++ + + + P+ + A Sbjct: 1 MNDRRPLRFWMVGLGVFITLIWLLHEMLLPFVAGMAVAYLLDPLADRME-RTGLPRWLAA 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVS----KVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ M V + LF ++ ++ + + +P + Sbjct: 60 TLVLLAFMLGATVAAVLLFPLMQAQIVQIAESAPGWIAWVKEEFLPDLEAIVARLSPEDV 119 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L + ++ + L+ + G+ +D ++ + F+ R Sbjct: 120 ERLRQAVGEYAGTVVSWTAALLRGLLVQ---------GVALVDVLSVLLITPVVAFYLLR 170 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + +D + R V + + G + I GL+ +A L G+ Sbjct: 171 DWDRLVRTVDGWLPRPHAPTIRGQVREVDRTLAGFVRGQATVCIALGLLYAAALSLTGLN 230 Query: 240 SHVALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +G+I +++ IP + V I + +++ + + I L Sbjct: 231 FGLIVGLIAGLLSFIPYVGSLVGFGLSVGIAVFQYDDLWRIALVAGIFVVGQTIEGYFLT 290 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P LVG + L + F L+ G G +G+ + + A+I V+ + Sbjct: 291 PKLVGERVGLHPVWVMFALLAGGSLFGFVGVLLAVPVAAVIGVLVR 336 >gi|256751431|ref|ZP_05492309.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus CCSD1] gi|256749650|gb|EEU62676.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus CCSD1] Length = 354 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 119/343 (34%), Gaps = 6/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKALLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWA 119 + I + ++ + + + E+ L AN + + I Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRI---RMY 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +++ + S + + + F ++ + ++A FF + Sbjct: 123 YVTLPPNITSLIENNMQSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 183 DKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFD 242 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++ I+ +P G+ ++Y +I N L + + + +V + + P Sbjct: 243 YPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVV-VVRQMIEP 301 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +VG I L L T + G + G LGL IGPV + + + Sbjct: 302 KIVGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKAL 344 >gi|296111044|ref|YP_003621425.1| transport protein [Leuconostoc kimchii IMSNU 11154] gi|295832575|gb|ADG40456.1| transport protein [Leuconostoc kimchii IMSNU 11154] Length = 370 Score = 90.7 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 109/324 (33%), Gaps = 14/324 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVMC-LFIVPLLFL 81 F+ F P+L A + + PI K + AVI T + ++ L Sbjct: 40 FISTVFVPLLVAGFLYYVLKPILKLVQKIKIHGWQIPRQAAVILTFLFFLSVIAGVIVVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q + W ++L+ ++ + + Sbjct: 100 VPTLVREITNLITALPGFAQDMQRFTT--------ETINSKWFENLNLSINVNQVRDAVG 151 Query: 142 KTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 K + ++++ + + LF+ DG + + + Sbjct: 152 KYAASFLTITAGTLGSIVSTVTSVTINLVTIPVVLFYMLSDGERLVPAIKKMFPERHADK 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +++ + I G I + G+ + Y++ G P L VI I ++P P Sbjct: 212 ITELTTKMDNTIERYISGQAIEMLFVGVTMAIGYFIIGQPYAWLLAVIAGITNIVPYIGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + + + + + + + P ++G + + L L+ Sbjct: 272 WIGVIPALLVASTQSWEQCLFVLIVMTVVQQLDGNFIYPNVIGKSLAIHPLTIMILLMVA 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 G++G+ + + A+ VI K Sbjct: 332 GNLWGIVGMILVVPVYAVFRVIIK 355 >gi|229093461|ref|ZP_04224564.1| hypothetical protein bcere0021_41850 [Bacillus cereus Rock3-42] gi|228689932|gb|EEL43736.1| hypothetical protein bcere0021_41850 [Bacillus cereus Rock3-42] Length = 361 Score = 90.7 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 49 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 101 IVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGVTIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 338 SVPVLAVIRTV 348 >gi|229105024|ref|ZP_04235678.1| hypothetical protein bcere0019_41600 [Bacillus cereus Rock3-28] gi|228678401|gb|EEL32624.1| hypothetical protein bcere0019_41600 [Bacillus cereus Rock3-28] Length = 361 Score = 90.7 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 112/311 (36%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 49 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ H + +I +K I + Sbjct: 101 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFVGVEMK---IQTLL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 338 SVPILAVIRTV 348 >gi|319650575|ref|ZP_08004715.1| hypothetical protein HMPREF1013_01320 [Bacillus sp. 2_A_57_CT2] gi|317397756|gb|EFV78454.1| hypothetical protein HMPREF1013_01320 [Bacillus sp. 2_A_57_CT2] Length = 366 Score = 90.7 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 116/323 (35%), Gaps = 5/323 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P++ + + F P+ + + + T +I +V+ L ++ + + ++ Sbjct: 41 FFPIIISGFLYFLLNPL-VRLLQRYKVPRTAAILIIYAAVIGLVMLIIGNIAPLISRQVT 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL + + + +S W E + ++ + L + + Sbjct: 100 ELFNDLPGYAKTTRDFVNSMSSTEEFKWFLEQDYISIEEIEARIMEYANTLPSRVTQGVA 159 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S + + ++I+ + LF+ ++DG + + K + + Sbjct: 160 GIVS----LVTNIAITIVTVPFLLFYMFKDGDKFPAAVSKFLPASYREEGVKTLKETGET 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G +A+ G + Y + +P + + +I AI +IP P A ++ + Sbjct: 216 LSSYIQGQITVALFVGTLSFIGYLIIDLPYALVMALIVAITNIIPYVGPFLGGAPAVIVA 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + I I L P ++G + L+ G+LG+ + Sbjct: 276 LFDSPTKAFLVVVVIVIAQQIEGNVLSPLILGKTLNTHPATIIILLLVAGNLAGILGMIL 335 Query: 331 GPVLMALIAVIWKESIMAIKENK 353 A+ I ++ ++ K Sbjct: 336 AIPTYAVTKTIVLNTVRFLRARK 358 >gi|225572141|ref|ZP_03781005.1| hypothetical protein RUMHYD_00435 [Blautia hydrogenotrophica DSM 10507] gi|225040407|gb|EEG50653.1| hypothetical protein RUMHYD_00435 [Blautia hydrogenotrophica DSM 10507] Length = 451 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 114/371 (30%), Gaps = 32/371 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------------- 58 M +++ + P+L I + PI + K Sbjct: 30 IFQMGVLIRGISIFLHILMPILYGAAIAYLICPITNFLERKVFFRFLEHRHFHLSKRIKS 89 Query: 59 --STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +++ V + C+ L+ L + + ++ + +W++D+ G Sbjct: 90 VVRYVSILLSLVFMCCIIYSLLMMLLPELIRSIVNIIYNFPSYI---LSAQKWINDVLEG 146 Query: 117 -MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC---LSIIFMII 172 + + LS + E +L N + + F D +++ I Sbjct: 147 NSQLHSFFQEFLSQY---SVKIEAYLTGNILPKLQETLQNFSEGVFDMLNVLKNLLIGAI 203 Query: 173 ALFFFYRDGFSISQ----QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + D L S + R K G + ++ G++ Sbjct: 204 VSVYILADKEGFVAKSKMWLYSFLSPERANVVIRSMRFTHKTFGGFINGKLLDSLIIGIL 263 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 L G P + V+ + +IP P S L++ + ++ Sbjct: 264 CYIGTNLIGTPYATLISVVVGVTNVIPFFGPYLGAIPSAILILLVDPIQCIYFVIFVFAL 323 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIM 347 L P ++G L ++ G G+ G+F+G PV L A+ WK Sbjct: 324 QQFDGNILGPKILGESTGLSSFMVILAILMGGGLFGIFGMFVGVPVCAVLYAMTWKIIRR 383 Query: 348 AIKENKEKISS 358 ++K+ K + Sbjct: 384 SLKKRKLPTDA 394 >gi|239917041|ref|YP_002956599.1| predicted permease [Micrococcus luteus NCTC 2665] gi|281414496|ref|ZP_06246238.1| predicted permease [Micrococcus luteus NCTC 2665] gi|239838248|gb|ACS30045.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 405 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 1/210 (0%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A FG ++ + + +L FF DG I + L A + R + Sbjct: 155 NSAVSFGSTAVNIGAGLFIALFSLIFFLYDGDRIWRFLLIFVPKAHRATVGRAGRSGWQS 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL- 269 + S +A + + +G + GVP + L V+ + + IP +++ L Sbjct: 215 LGSYVRVQIFVAFIDAVGIGLGALILGVPLAIPLAVLVFLASFIPMIGATLTGGMAVLLA 274 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ + NA + + I L+P ++G + L L F + G +GL G Sbjct: 275 LMSNGLVNALLMLGVVLLVQQIESNVLQPLVMGKAVALHPLAVFLAVAAGSTVLGLAGAV 334 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A + + E + + + Sbjct: 335 FAVPVLAFVNSFVRALTADTPEELTERTDH 364 >gi|229062085|ref|ZP_04199410.1| hypothetical protein bcere0026_41570 [Bacillus cereus AH603] gi|228717237|gb|EEL68912.1| hypothetical protein bcere0026_41570 [Bacillus cereus AH603] Length = 361 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 116/318 (36%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I +K Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFVGVEMK- 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 153 --IQTLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGIMIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|313126137|ref|YP_004036407.1| permease [Halogeometricum borinquense DSM 11551] gi|312292502|gb|ADQ66962.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 418 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 117/343 (34%), Gaps = 32/343 (9%) Query: 14 WMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 W I ++ +L Y F + + I +++ PIY + + A +A ++ Sbjct: 14 WAIGLVLAAALAYVFYSFVGTFVFGIFIYYSTRPIYRRIKRRVRP-PSLAAAVALFALAL 72 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + + E+ L + L+ + L L+ + Sbjct: 73 PALALIAYALAIVVNELVRLTNNGFFDLSRYPITSDQLARLTDPNTILSLELSSLTESEL 132 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 +ILS + + F+ + + MI F+ RD ++ + Sbjct: 133 SQILSSIGSAADTLAFLGVGG-----------VHLFVMIALAFYLLRDDHRFARWVRMNF 181 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VPSHVAL 244 + V + ++ F G + A+ G + AY + +P+ + Sbjct: 182 ADDRGV-MEAYCTAVDRDFKNIFFGNILNAVLTGTIGVIAYTVLNMVGPDGVYIPAAALV 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIEL-FIVDKTL 296 G++ + ++IP G + + V+IYL G + + + I D L Sbjct: 241 GLLAGVASLIPVVGMKLVYIPVAIYLAGVSYFSNPGAFWFVIAFIAVSFVIVDTIPDLVL 300 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 RP++ G L G G G+F P+++ L+ Sbjct: 301 RPYVSGR--TLHVGAVMIAYTFGPLLFGWYGIFFAPMILVLVV 341 >gi|312862680|ref|ZP_07722920.1| putative membrane protein [Streptococcus vestibularis F0396] gi|311101540|gb|EFQ59743.1| putative membrane protein [Streptococcus vestibularis F0396] Length = 392 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 128/360 (35%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPI---YSSF 51 +LN Q +M ++I+ +I +++ + F ++ L+I + + Sbjct: 18 ILNNQVVMAFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K + T ++ + L + + ++ L+ Sbjct: 78 VEKTGLNRTMSILLIYAILALLLVWGISTAIPNLQDQILILIRNAPSYIARANSETERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +P LS + + T+ + +I FAS + ++II Sbjct: 138 KLPILSNFHGDLEAVLSDFSARMVNYAEHFSTSALTWIGTFASTVARVT----VAIILTP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + S F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKMKHSFVSALPTRFRKTTVRMLSDINSQLEGYVQGQVTVAIVVAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP G+ ++ V I L++G + + IE Sbjct: 254 MFKIVGLRYGMTFGILAGFLNMIPYLGSFLAMVPVVIMGLVQG-PAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ +E + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVVREIFDWYR 372 >gi|290957036|ref|YP_003488218.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260646562|emb|CBG69659.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 374 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 28/342 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ ++ V ++ F P+L AL+ P Y ++ + + A + Sbjct: 29 SALTLLVTGVVYVGVWICVTFQTTVTPILIALLGTALLGPFYRRLVA-MRFNKSLAAGLT 87 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +V+ + + + +++S + A S+ + Sbjct: 88 CAAVVVVMGGAAYIVVAALIDTGDQIISSLRQA----------------AKSLSDEFGLA 131 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L ++ L G + ++ + + ++ +FFF RD Sbjct: 132 GTSLDDLAQNAKELLSKFGGTAASGVLTGV-SAVSEFLAAAVLAMLLMFFFLRDSDRAVA 190 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L SL + ++R + I G T+IA +G+ + + VP V LG Sbjct: 191 SLHSLAPRGSGDTLEVMARRAFRAIEGYMRGTTLIAFIDGVCIAVGLLILQVPGAVGLGA 250 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD----KTLRPFLVG 302 + + A IP AV+I + LW +F V L+P + Sbjct: 251 LVFVGAYIPYLGAFLSGAVAILVAFAD---RGLVTALWAVGVVFAVQLLEGNVLQPMIHS 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +++ L G G+LG+ + L A ++ + E Sbjct: 308 RTVQMHPAAILLALTAGASLAGILGMLLAVPLTAAVSGVLSE 349 >gi|313125203|ref|YP_004035467.1| permease [Halogeometricum borinquense DSM 11551] gi|312291568|gb|ADQ66028.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 396 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 130/363 (35%), Gaps = 27/363 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKG-FFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + ++ + W++ I V L F+ F + L + + + P+YS + + + Sbjct: 7 STIDRSRAIWWVLGVAIFVVLAFVADAFLGTFMLGLFLYYATRPVYSRIRGRIGQ-PSIG 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A +A + + ++ + + + E+ V + + +L SEL Sbjct: 66 AAVALLVLSLPVVLLVNYTVLIAVQELSAFVGQNQQGI--LAALKPYLGSFESLQAPSEL 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L +P L +++T + I AS ++ F F+ RD Sbjct: 124 LATLLENPSELVDMTDTATVEAVLSSIAGTASFILDAAFQLFIAFAFA----FYLLRDDR 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG----- 237 +S V + +R+ + G + A ++ +Y Sbjct: 180 RLSAWTRENLSGHGGV-MDAYMTAVDRDLRTIYFGNILNAFAIAVIAAVSYNAINLFAPP 238 Query: 238 ---VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI------FNATCLFLWGAI 287 +PS LG +T ++IP G I + V++ L ++ + + A + Sbjct: 239 SLWIPSPTLLGALTGAASLIPVVGMKIVYVPVTVLLAVEAALTAPDAFWVALAYGAVSLV 298 Query: 288 EL-FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D LRP++ G L F + G G GLF+GP+L+ + + + Sbjct: 299 VVDTIPDFLLRPYVSGR--NLHTGTVMFAYIIGPALFGWYGLFLGPLLLVIAVHFVRIVL 356 Query: 347 MAI 349 + Sbjct: 357 PEL 359 >gi|323142306|ref|ZP_08077138.1| hypothetical protein HMPREF9443_01937 [Phascolarctobacterium sp. YIT 12067] gi|322413190|gb|EFY04077.1| hypothetical protein HMPREF9443_01937 [Phascolarctobacterium sp. YIT 12067] Length = 356 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 129/350 (36%), Gaps = 6/350 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ I LY + GF P+L A+ + F +P+ ++ + + Sbjct: 6 PQIRKSTFFKLGVVTAISYVLYLMAGFLLPLLLAVGLAFALYPLVNAIAQVRMAH-GMIK 64 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V+++ + +F+F + L ++ Q +P S++ + Sbjct: 65 LSRVVAIILALMAFCIFIFMIIGFIILPLFGQMNEFLQK-LPALAVKSNLQDLDSMLKDP 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRD 180 + P +L L + F+ + + +I + F+F +D Sbjct: 124 STIPLLPSDFNMLVNGLL-NWAMGFVGTVLRNLVQSSLGIVQSLIGLIIVPFLAFYFLKD 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + +L + ++ + + + + GM +++ G V+ G+ Sbjct: 183 WRELRLMVINLFNYDAQEKAAEVVDEIGRTMSAYVRGMGKLSLISGFVITIGTAFLGIDF 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG + +P P+ ++++ A + L+ + + + P L Sbjct: 243 PLVLGFWAILAETVPVVGPLMGAVPAVFIAYGQAPEAAFHVALFYLVYYQLDANFIMPKL 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +G I L + L+ G + G+LG+ + A+ V++K+ A + Sbjct: 303 MGQKIDLHPVVLIISLLIGAKLFGILGMVFAVPVAAVYRVLYKQLWHAGE 352 >gi|307706792|ref|ZP_07643597.1| conserved hypothetical protein [Streptococcus mitis SK321] gi|307617877|gb|EFN97039.1| conserved hypothetical protein [Streptococcus mitis SK321] Length = 388 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLSFARNVPVYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQV----IVALIIVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|291280377|ref|YP_003497212.1| transporter [Deferribacter desulfuricans SSM1] gi|290755079|dbj|BAI81456.1| transporter [Deferribacter desulfuricans SSM1] Length = 344 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 128/321 (39%), Gaps = 15/321 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A I + P+ + K T +I V + I +LF+F + E+ Sbjct: 33 LTPFAIAFFISYLLDPVVDRLENLKFNR-TLSVLIVFVLFSLIVIAIILFIFPVMINEIN 91 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDF 148 L+ K+ P +L + + + + +K L +N + Sbjct: 92 ILLKKI----------PVYLQMLDNKIKEYNYYAIIQPYINEIKSFVVKNLGKISNILLD 141 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I S + FL++ L + I +F+F +D SI + ++ E S Sbjct: 142 IFNVLSGYLGNFLNFVLLYSIVPILIFYFLKDFDSIVAKTKTMLEKKGFLNVVDKSEEFN 201 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +++S F G I+++ G++ + G+ V +GV++ I++M+P I S+ Sbjct: 202 SILKSYFRGQFIVSVLLGILYSVTLLIVGIEGAVFVGVLSGILSMVPYLGFIVGFVTSLL 261 Query: 269 LLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L ++F+ + L I I + P +VG + L + F ++ G G+ Sbjct: 262 LAFIQFQDLFHPLFVVLGFTIVQVIESNLITPKIVGESLGLHPVAVIFAIMVGGSLFGIA 321 Query: 327 GLFIGPVLMALIAVIWKESIM 347 G+ + ALI V + ++++ Sbjct: 322 GMIFSLPIAALIKVSFMDNLL 342 >gi|241666775|ref|YP_002984859.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862232|gb|ACS59897.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 662 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 109/341 (31%), Gaps = 24/341 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P + + + ++ LYF K P+ A+++ F PI S +K AVI T Sbjct: 30 PSRMPAFASVLAVIAILYFGKEVLLPLAIAVLLTFALAPISSRL--RKLGMPRIPAVIVT 87 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + L L+ + E+ + + I R L + T + Sbjct: 88 VVIAFLV---LVLFGLVVAGHVAEVAQNLPAYQGNIIAKIRSLQESGTDSGIVRRLTSVV 144 Query: 128 SHPQSLKILSETFLKTNGIDF----------------IPRFASRFGMIFLDYCLSIIFMI 171 +E G I S G L S+ +I Sbjct: 145 ESVGRELSNAEQRPGAPGTGSRPREPVLVEIFAPSRPIETLTSLIG-PLLGPIASLGLII 203 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + F + + + L + + + + L ++ G+ L Sbjct: 204 VVVIFMLLEREELRDRFIRLVGYGDLHRTTEAIQEAGSRVAQYLLMQLVVNCAYGVPLAL 263 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-- 289 W G+P+ G++ ++ +P P+ T + ++L + + L++ + Sbjct: 264 GLWAVGIPNPALWGMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSLVLWVGAIFLVLE 323 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + P+L G L L + G +GL + Sbjct: 324 LTSNNVIEPWLYGSRTGLSPLAIIVAAIFWAWLWGPVGLVL 364 >gi|228917024|ref|ZP_04080584.1| hypothetical protein bthur0012_42360 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929435|ref|ZP_04092456.1| hypothetical protein bthur0010_41200 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935711|ref|ZP_04098524.1| hypothetical protein bthur0009_41560 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948104|ref|ZP_04110388.1| hypothetical protein bthur0007_42300 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123931|ref|ZP_04253123.1| hypothetical protein bcere0016_42160 [Bacillus cereus 95/8201] gi|228659233|gb|EEL14881.1| hypothetical protein bcere0016_42160 [Bacillus cereus 95/8201] gi|228811462|gb|EEM57799.1| hypothetical protein bthur0007_42300 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823949|gb|EEM69768.1| hypothetical protein bthur0009_41560 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830223|gb|EEM75839.1| hypothetical protein bthur0010_41200 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842631|gb|EEM87719.1| hypothetical protein bthur0012_42360 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 361 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 49 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 101 IVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 338 SVPVLAVIRTV 348 >gi|306825324|ref|ZP_07458666.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432760|gb|EFM35734.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 388 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLTFAKNVPTYLEDADRVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + + ++++ F S + +++I + LF+ RDG + L + Sbjct: 161 LWASKISSQAVNWVSAFISSVSQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|325274454|ref|ZP_08140534.1| hypothetical protein G1E_14686 [Pseudomonas sp. TJI-51] gi|324100408|gb|EGB98174.1| hypothetical protein G1E_14686 [Pseudomonas sp. TJI-51] Length = 340 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 124/335 (37%), Gaps = 14/335 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY L P L +++ + + P+ + + V+ +F + L Sbjct: 3 LYSLHNILTPFLIGILLAYLADPLVDWLERRGLSRTW--------GVVVVFALFTLLFMA 54 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ + L ++V + + WL +P L + +SE Sbjct: 55 LLLVLVPMLAKQLVRLYELAPQMLDWLQHVALPWVQQRLGLADGFWKFDKIKSAISEHMG 114 Query: 142 KT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +T + + + A+ + + + +++ + + F+ RD + +L SL Sbjct: 115 QTTDIVGVVLSQATASSLALIAWLANMVMIPVVGFYLLRDWDLMMAKLRSLLPRQQEPQI 174 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++ +V+ + G ++ + G++ L G+ + +G++ + A++P I Sbjct: 175 VGLAGECHEVLGAFVRGQLLVMVALGIIYSVGLMLVGLELGLLIGMLAGLAAIVPYMGFI 234 Query: 261 SFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 ++ G+++ + I + L P LVG I L + F ++ Sbjct: 235 IGIGAALVAGLFQFGGDLYPMLGIVAVFVIGQALEGMVLTPLLVGDRIGLHPVAVIFAIL 294 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G G+ + + A+I V+ + KE+ Sbjct: 295 AGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKES 329 >gi|30248120|ref|NP_840190.1| hypothetical protein NE0089 [Nitrosomonas europaea ATCC 19718] gi|30180005|emb|CAD84000.1| Domain of unknown function DUF20 [Nitrosomonas europaea ATCC 19718] Length = 352 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 124/318 (38%), Gaps = 10/318 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ ++ +Y L P L A +I + P+ + ++K T + + M +FI Sbjct: 17 VIGVVSALIYLLSPILTPFLLAAVIAYICNPLVTWLEARKIPR-TLSTIFVMLMTMGIFI 75 Query: 76 VPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L LF E+ LV ++ + WL D + ++ + + Sbjct: 76 AMALILFPLFEKEVSRLVERIPSFLDLVKSQFIPWLED-----NFNVELQIDIASLKQML 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +P S G+I L + ++++ + + LF+ RD ++ +Q+ L Sbjct: 131 TEHWKSAGGVAAQMLPSLKSG-GLILLTFLMNLVLVPVVLFYLLRDWNNLIRQVGELIPP 189 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ ++R V+ G T + + + WL + + +G+I+ I+ + Sbjct: 190 VWQKQIFTLARETDDVLAEFMRGETAVITIMSIYYVTGLWLVKLEFALPIGLISGILVFV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPT 312 P I+ A++ + I + + +W + + + P LVG I L + Sbjct: 250 PYLGTITGLALATFAAITQFQEWSGVIAVWVVVGSGQLLESMLITPRLVGERIGLHPVAV 309 Query: 313 FFGLVGGVRTMGLLGLFI 330 F L+ + G +G+ + Sbjct: 310 IFALLAFGQLFGFIGILL 327 >gi|294786614|ref|ZP_06751868.1| putative membrane protein [Parascardovia denticolens F0305] gi|315226201|ref|ZP_07867989.1| hypothetical integral membrane protein [Parascardovia denticolens DSM 10105] gi|294485447|gb|EFG33081.1| putative membrane protein [Parascardovia denticolens F0305] gi|315120333|gb|EFT83465.1| hypothetical integral membrane protein [Parascardovia denticolens DSM 10105] Length = 546 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 111/348 (31%), Gaps = 20/348 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLS----ALIIGFTSWPIYSSFISKKEESSTFLAV 64 +G+ +I + + ++ + V+ AL I P+ + A Sbjct: 42 RGLFYTVIAIFLGIFVWNSWPKISGVVFYVIVALFISLALEPLIIRLVKH-GWKRGAAAG 100 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + I + + +L++ + P +DI S Sbjct: 101 VTIIGFVVVVIAFFSVFGIMLVQQATKLIATI----------PNTYNDI--RNSISSWTG 148 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L L + L +G ++ + S + ++I+ +++ ++ G + Sbjct: 149 YELPKMNDLSTSALRELSRHGQGYLGQLYSTV-SSVVSGLMAILTILLVAYYISAAGPKL 207 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + I V I + I+AI G L L +P + L Sbjct: 208 RRSVCKWIPRRSQRKFIVIWTTVQGQISNYLYSRFILAILNGTFLALFMILLKIPYWLPL 267 Query: 245 GVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP G + I A L ++ + I + +P + Sbjct: 268 AIWCGLVSQFIPTIGTYLGGVIPIISAWGTNGWQYAVYLLIYITVYQQIENMLFQPRVSK 327 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L F + G LG F+ + A I + + + + Sbjct: 328 DTMDLNPAVAFLSVFFFGGLFGALGAFLALPITASIQALLQAYMRSYD 375 >gi|319653256|ref|ZP_08007358.1| hypothetical protein HMPREF1013_03973 [Bacillus sp. 2_A_57_CT2] gi|317395177|gb|EFV75913.1| hypothetical protein HMPREF1013_03973 [Bacillus sp. 2_A_57_CT2] Length = 361 Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 127/355 (35%), Gaps = 33/355 (9%) Query: 10 GIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 I +I+F++ YFL F PV+ + I+ + P+ ++++ Sbjct: 14 TIFVLIIIFLLGKIDYFLWPIRALVATIFFPVVISGILYYILRPLVRLVSRSLPKTAS-- 71 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V+ ++ +L + + N G V ++P M Sbjct: 72 -----IIVIFAVVLGAGYLGFNAI------------GNLIGSQVTELSENLPAKMEDLSD 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI-------IFMIIALF 175 T+ + ++ + S +K ++F+ S G + +I + + LF Sbjct: 115 ETEKVVEKNNMGMFSYDQVKNKALNFLETILSGAGENVMKVFSTITSIVTVMVVVPFILF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +F +D + L KI + K + S G I+A+ +G+++ Y + Sbjct: 175 YFLKDDHKLRPFLLKYLPDKHEEEGNKILGDIDKTLFSYVTGQFIVAVVDGVLMYFGYKI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+ + L + ++P P+ +I++ + + L + Sbjct: 235 IGLEYALTLAFFAMFLTVVPFLGPVLGIIPAIFIGLLQGPGMVLKIILVLIAVQLLESNL 294 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + P ++G + L L L+ G +G+ I +++ V+ K+ + Sbjct: 295 VSPHVMGKRLNLHPLTVIIILMAAGSIYGFIGILIAIPFYSVVKVLVKDFRRFYR 349 >gi|229169133|ref|ZP_04296848.1| hypothetical protein bcere0007_40850 [Bacillus cereus AH621] gi|228614361|gb|EEK71471.1| hypothetical protein bcere0007_40850 [Bacillus cereus AH621] Length = 361 Score = 90.3 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFFIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I K Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFGGVETK- 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 153 --IQVLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|330953482|gb|EGH53742.1| permease [Pseudomonas syringae Cit 7] Length = 358 Score = 90.3 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 128/344 (37%), Gaps = 15/344 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ +V+ G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREGQIVKLAGECHEVLGGFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P + ++ + ++ I + L P LVG I L Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFFMIGQALEGMVLTPLLVGDRIGLHP 304 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 VAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 348 >gi|296115151|ref|ZP_06833792.1| hypothetical protein GXY_05201 [Gluconacetobacter hansenii ATCC 23769] gi|295978252|gb|EFG84989.1| hypothetical protein GXY_05201 [Gluconacetobacter hansenii ATCC 23769] Length = 387 Score = 90.3 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 112/340 (32%), Gaps = 10/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + +++VS++ + + +A ++ + + ++A+ V+ + Sbjct: 56 ALTVTVLVVSIWLVGDVLMVLFAATLVAVILHNLAGHLERRTRL-PYWVAL---SIVVLI 111 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I L L + E+ E ++ A + M S L + S Sbjct: 112 IISALTALIWSSGPEISEQALRLRAALSEQA------RTLRDRMDDSTPGRMILDNLPSS 165 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +E +G I + F ++ ++IA +F + L Sbjct: 166 FGGNEHSSGGSGFGSIAGSMTGFVTSAFGAAGTLAVILIAGLYFAISPEIYVNGMLRLVP 225 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + + G + GL+ W+ GVP +ALGV+ + Sbjct: 226 REYRMRTRDLLLTAGQTLWAWTAGQALDMTVVGLLSFIGLWIIGVPLALALGVVAGLANF 285 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP ++ + + + A F + P + +K+P T Sbjct: 286 IPYIGAFVGAVPAVLIGLSQGTREGLTVLGLYAAIQFFEGNVMAPLIQRHAVKMPPGLTI 345 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ GL + L A + + + + +++ Sbjct: 346 LSQTIFGTILGIPGLILASPLTAALLAMMDRATPQLSDDE 385 >gi|194017074|ref|ZP_03055686.1| membrane protein YrrI [Bacillus pumilus ATCC 7061] gi|194010942|gb|EDW20512.1| membrane protein YrrI [Bacillus pumilus ATCC 7061] Length = 354 Score = 90.3 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 118/325 (36%), Gaps = 13/325 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LK P+L A+ I + +PI + TVS++ ++++ + Sbjct: 36 FLLLKAVLIPLLIAIFISYLLYPIVEKLHAGGLPR--------TVSLLLIYVLFFGGIGL 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ ++ ++ + + + + W L I+ Sbjct: 88 AVYKGAPVMIKQLNELSEQIPVLAETYNGALSHIHHHTSHWPDGLHDRLDRLIVQSETYA 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG + + + LDY L + +F+ +D ++ + L F Sbjct: 148 ANGAERMILSC----KVLLDYALVAALIPFLVFYMVKDMNTMKRVAWYLTPPSFRKRGHA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + + G ++ G WL +P + LG++ +IP PI Sbjct: 204 FVKAVDESLGNYIRGQLLVCSLIGGAAAIVLWLFHIPYPLVLGMLIGATNVIPYFGPIIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++++ ++ + + + A+ F+ L P +VG + + + L+ G Sbjct: 264 AVPAVFIAFTISVKSVIIVLITVAVLQFLESNVLSPIIVGRSLHMHPVVIMLVLLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 GL+G+ + A+I VI + I+ Sbjct: 324 FGLIGMILAVPTAAIIRVIIVQYIL 348 >gi|225854947|ref|YP_002736459.1| transport protein [Streptococcus pneumoniae JJA] gi|225722535|gb|ACO18388.1| transport protein [Streptococcus pneumoniae JJA] Length = 388 Score = 90.3 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 120/338 (35%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K +++ +F+ Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNR--------VIAITIVFV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQS 132 + LF+ + + + L +V+ ++ + I G+ A L + L + Sbjct: 94 IIALFIIWGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLT 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T L + + S F +++I + LF+ RDG + L Sbjct: 154 NFSSQATVLASKVSSQAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFI 213 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ V + + + G +AI ++ + + G+ V LGV I+ Sbjct: 214 PRKLKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVIFIIFFKIIGLRYAVTLGVTAGILN 273 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P ++ L + + + +E I + + P ++G + + + Sbjct: 274 LVPYLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINV 333 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G+ G+ +G + A V+ K Sbjct: 334 LFVLLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|260592635|ref|ZP_05858093.1| putative membrane protein [Prevotella veroralis F0319] gi|260535405|gb|EEX18022.1| putative membrane protein [Prevotella veroralis F0319] Length = 374 Score = 90.3 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 126/364 (34%), Gaps = 16/364 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKE- 56 M +T+ + I + ++ +KG P A + + +PI K Sbjct: 1 MDKTITFDKFIRWSLTALAVVAVFLVIKGLSSVLLPFFIAWFLAYLLYPIVKFVQYKLHV 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S ++ + V+ + L F+ + ++ L++ + I Sbjct: 61 PSRALSIIVTMIFVIAIIAGVLYFIVPPMIGQIDRLMTIANRYLHETAHTNNISAMIQQW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + ++ + + + I L S I ++ +FF Sbjct: 121 VSENQYQIERFLKSPDFTDAIKSVMPK-----LFSVIGQTASIVLSIIASFITLLY-MFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ + +W+++ + V + + + G ++++ G++ + + Sbjct: 175 ILLDYEFLTSNWIRIFPKKARPFWRELEQDVERELNNYVRGQGLVSLCMGVLFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELF 290 P + LG++ ++ +IP + + L+ G F AI Sbjct: 235 DFPMAIGLGILIGVLNLIPYLHTFALIPTAFLALLKAADTGQNFWIIFGSALAVFAIVQA 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL I L LI W+ + Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEH 354 Query: 351 ENKE 354 E++E Sbjct: 355 EDEE 358 >gi|126728913|ref|ZP_01744728.1| hypothetical protein SSE37_08798 [Sagittula stellata E-37] gi|126710843|gb|EBA09894.1| hypothetical protein SSE37_08798 [Sagittula stellata E-37] Length = 385 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 112/340 (32%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I V+L+FL P + I + P+ S + TV+ + +F+V Sbjct: 16 AAIFAVTLWFLGNVLLPFVLGGAIAYCLDPVADRLERA-GLSRNASVGVITVAGVLIFVV 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + L P+ D+ + + Sbjct: 75 LTLAIIPLLIGQATALFE----------TAPQLFRDLQAFLTEKFPNLMTEGGVVQQSLA 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S + A L+ + + + + + D ++ Q+D+L Sbjct: 125 SLGETIKTKGAAVAETALASVGSLLNVLMLFLIVPVVAVYMLIDWDNMVAQIDTLVPLDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++R V V+ GM + + G W G+ + +GV+ + IP Sbjct: 185 RETVRELARSVDSVLAGFIRGMGSVMLILGTYYAVLLWAVGLQFGLVVGVVAGFLTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++I L + G + ++ FI + P LVG + L + Sbjct: 245 VGAIVGGGLAIGLALFQFWGEWWWIVAVWAIFQSGQFIEGNIVTPRLVGSSVGLHPVWLL 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +GL + L A I VI + +E+K Sbjct: 305 LALSVFGALFGFIGLLVAVPLAAAIGVIVRFLGDRYRESK 344 >gi|281421273|ref|ZP_06252272.1| putative membrane protein [Prevotella copri DSM 18205] gi|281404808|gb|EFB35488.1| putative membrane protein [Prevotella copri DSM 18205] Length = 375 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 124/350 (35%), Gaps = 15/350 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMC 72 +I+ +L +L P A + +P+ +K +IA + + Sbjct: 17 TLIVLAVLYMTNYLSSVLLPFFIAWFFAYLLYPVVKFIENKLHVRIRALSILIAMGTAIA 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + L + + + +L + + I + A++ +H + Sbjct: 77 VIGGVLWLIIPPMIDQFDKLGEVLTRWLHQTTHTNNLTALIKDWLQANQEQIEHFLKSKD 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 +T + + S+ + + S+I ++ +FF D +++ + Sbjct: 137 FSDAIKTTMPK-----VFSVVSQTATVLMSIVASMITLLY-MFFILLDYETLTANWVRIF 190 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +W + + V + + + G ++A+ G++ + + G P + LG++ IM Sbjct: 191 PKKNRPFWSALMKDVERELNNYIRGQGLVALCMGIMFCIGFTIIGFPMAIGLGILIGIMD 250 Query: 253 MIPGGAPISFTAVSIYLLI----KGNIFN---ATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++P + + ++ G F + ++ +++ I D + P ++G + Sbjct: 251 LVPYLHTFALIPTAFLAMLKAADTGQNFWLVFGLAVLVFCVVQV-ITDMVVTPKIMGKAM 309 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L L +G LGL + L LI W+ + K + Sbjct: 310 GLNPAILLLSLSVWGALLGFLGLIVALPLTTLIIAYWQRYVTKEKPQYHE 359 >gi|2960002|emb|CAA76498.1| outer membrane protein [Campylobacter jejuni] Length = 364 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 119/302 (39%), Gaps = 22/302 (7%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWAS 120 ++++ + F+ P+ L + + + +VL Q V + +P Sbjct: 72 SSLVSVLIYNFFFLEPIFSLKVHDSGNIITFTTMFIVLVTQTLDYVKNYQFTLPESFNFL 131 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E K L +S+ L +AS F + + ++ + + FF Sbjct: 132 EPKIKEFLASIDLNSISKQIL---------SYASSFTKSGAKFLIDMVLICVFYFFANLY 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + L S+ + + V V+ M I+AI +G + G G Sbjct: 183 GTELVIYLKSIIP-IDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITIFYGYDG 241 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP 298 + +GVI A+ ++IP G + + VS+Y N+ +A +F++ I + FI D ++P Sbjct: 242 -ILMGVIFAVSSLIPAIGGALIYMPVSLYEFASNNLNSALVIFIYSVIVISFIADTLIKP 300 Query: 299 F--------LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LV P K+ L F ++ G+ T G G+ +GP ++ + ++ Sbjct: 301 LIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVSTLRMYVILKD 360 Query: 351 EN 352 +N Sbjct: 361 KN 362 >gi|229013608|ref|ZP_04170739.1| hypothetical protein bmyco0001_40160 [Bacillus mycoides DSM 2048] gi|229135213|ref|ZP_04264012.1| hypothetical protein bcere0014_41150 [Bacillus cereus BDRD-ST196] gi|228648255|gb|EEL04291.1| hypothetical protein bcere0014_41150 [Bacillus cereus BDRD-ST196] gi|228747667|gb|EEL97539.1| hypothetical protein bmyco0001_40160 [Bacillus mycoides DSM 2048] Length = 361 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFFIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I K Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFGGVETK- 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 153 --IQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|311068972|ref|YP_003973895.1| hypothetical protein BATR1942_10155 [Bacillus atrophaeus 1942] gi|310869489|gb|ADP32964.1| hypothetical protein BATR1942_10155 [Bacillus atrophaeus 1942] Length = 369 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 122/328 (37%), Gaps = 6/328 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I F+ + F + F P++ + ++ + P+ +K + ++ ++ L Sbjct: 29 TLIDFLFRPFIIFCQTLFGPIILSGVLYYLFRPLVKLLHTKAKLPKGIAILLIYLTAGGL 88 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + + + VS W+ I W S L + + + Sbjct: 89 FTLFIYTAGPEIQKQFNSFVSNFPTLLDQAR---DWIETIQHNKWFSRLQEQSSLNQITD 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K+ + + I + + ++I+ + L++ ++G + L Sbjct: 146 KVTN---YSNSFISSLGDNIKSMAGAVTNAVITIVIIPFVLYYMLKEGEKAPRYLLHFLP 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K+I + + + + G I++ G+++ Y++ G+ + LGV+ + + Sbjct: 203 KKQQKEGKRILEDMDQTLSAYIQGQIIVSCCVGVLVTIGYFIIGLDYPLMLGVVAMVTNV 262 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P T + + + + A + + I I + + P ++G + + L Sbjct: 263 IPFIGPWIGTFPGVVVGLFDSPTTAILVIVVVVIAQQIESQIISPQVMGRKLSIHPLTII 322 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F L+ G++G+ + A+ VI Sbjct: 323 FLLLAVGNFAGIVGMLLAIPGYAVAKVI 350 >gi|229192602|ref|ZP_04319563.1| hypothetical protein bcere0002_42530 [Bacillus cereus ATCC 10876] gi|228590909|gb|EEK48767.1| hypothetical protein bcere0002_42530 [Bacillus cereus ATCC 10876] Length = 361 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|229098862|ref|ZP_04229798.1| hypothetical protein bcere0020_40860 [Bacillus cereus Rock3-29] gi|229117887|ref|ZP_04247249.1| hypothetical protein bcere0017_41570 [Bacillus cereus Rock1-3] gi|228665544|gb|EEL21024.1| hypothetical protein bcere0017_41570 [Bacillus cereus Rock1-3] gi|228684535|gb|EEL38477.1| hypothetical protein bcere0020_40860 [Bacillus cereus Rock3-29] Length = 361 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 112/311 (36%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 49 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ H + +I +K I + Sbjct: 101 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFVGVEMK---IQTLL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEIAGIVGLLI 337 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 338 SVPILAVIRTV 348 >gi|118479551|ref|YP_896702.1| permease [Bacillus thuringiensis str. Al Hakam] gi|229186630|ref|ZP_04313791.1| hypothetical protein bcere0004_41730 [Bacillus cereus BGSC 6E1] gi|118418776|gb|ABK87195.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|228596889|gb|EEK54548.1| hypothetical protein bcere0004_41730 [Bacillus cereus BGSC 6E1] Length = 361 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPIVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPALMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPVLAVIRTV 348 >gi|228941558|ref|ZP_04104107.1| hypothetical protein bthur0008_41950 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974488|ref|ZP_04135055.1| hypothetical protein bthur0003_42410 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981082|ref|ZP_04141383.1| hypothetical protein bthur0002_42430 [Bacillus thuringiensis Bt407] gi|228778623|gb|EEM26889.1| hypothetical protein bthur0002_42430 [Bacillus thuringiensis Bt407] gi|228785205|gb|EEM33217.1| hypothetical protein bthur0003_42410 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818114|gb|EEM64190.1| hypothetical protein bthur0008_41950 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 361 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ R G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTRMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|320104445|ref|YP_004180036.1| hypothetical protein Isop_2922 [Isosphaera pallida ATCC 43644] gi|319751727|gb|ADV63487.1| protein of unknown function UPF0118 [Isosphaera pallida ATCC 43644] Length = 429 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 120/337 (35%), Gaps = 19/337 (5%) Query: 14 WMIMFIILVSLY---FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ +L SLY +LK P+ ALI+ PI + F ++ A Sbjct: 31 ALIVLAVLASLYAIHWLKPILVPIALALILACLFSPITTYFRTRWSLGPITSA------- 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF++ + + ++ L + + +S +E + + + Sbjct: 84 VTLFVLSTVLGVFVFIITANSLFQAITSLPMQFEFIIGKISS-----RLTETYRDYPALR 138 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L L + + ++ + F + ++ ++ Sbjct: 139 GVLPDPDAVDLLGRTNALLVEGLKSSYQELTVRVGEGVVVMTLVLFLLAETEILAPRVIR 198 Query: 191 LGEHLFPA--YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + R + +R+ + T++ + G+ + YW G+P + +G+ Sbjct: 199 FFRPLQRDAQEAEALLRGLVHQVRAFLVARTMLNLMLGMAMAGVYWAFGLPFALLMGLAL 258 Query: 249 AIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI+ IP PI F V + +G + +A L + + L P+L+G + Sbjct: 259 AILNYIPYLGPILGGFPPVLMLFASEGTLSDALLLLAVYIGIITMEGYVLTPWLMGRSLD 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G +GL + + A I ++++ Sbjct: 319 LNGTTVLIACLVWWFLWGDIGLILAMPITAAINLVFQ 355 >gi|327192209|gb|EGE59178.1| putative permease protein [Rhizobium etli CNPAF512] Length = 424 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 104/326 (31%), Gaps = 11/326 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S V Sbjct: 60 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATVG 118 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F + L+ L + + + ++ + W Sbjct: 119 ILIAFVIVFALALMILIPVLISQFNDFAERLPGYISQLQQFITQTQNSLLPDWVKSQAGT 178 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 179 IKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 233 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++I++ + + I G + + G+ + L G+ + +G Sbjct: 234 SKVDQWIPRDYVGDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 293 Query: 246 VITAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +++ IP + V+I + L ++ + F+ L+P LV Sbjct: 294 LFAGMISFIPYVGSLVGLILAVGVAIVQFWPDYPWIGLVLAVFFSG-QFLEGNILQPKLV 352 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L G +G Sbjct: 353 GSSVGLHPVWLMFALFAFGALFGFVG 378 >gi|261839604|gb|ACX99369.1| membrane protein [Helicobacter pylori 52] Length = 348 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 137/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F VL A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDVLIAGLLCVGFFQVKVFLDKRFLN--LISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLVLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F T+ ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSATSITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITIILEGVAFGLMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|109947348|ref|YP_664576.1| hypothetical protein Hac_0787 [Helicobacter acinonychis str. Sheeba] gi|109714569|emb|CAJ99577.1| amaA [Helicobacter acinonychis str. Sheeba] Length = 348 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 140/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + LY + F VL A ++ + + F +++ Sbjct: 1 MKAQYFFWILFLIGFYWMLYLYQDFLMDVLIAGLLCVGLFQVKVFLDKHFFN--VFSSLL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL ++ +E + Sbjct: 59 CVLVLASVLIVPLYFIIYKSSNIIFEI------NFEKLSALIKWLKEM-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F T+ ++ + +S G L + ++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFNATSITGYLLKISSYVGKYGLKLITDALLILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L KKI V ++R L I I EG+ G G LG Sbjct: 168 HYFLGVLP-LQIHQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGW-FLG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L G++ A + L+ + + ++D L+PFL+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGHVNGAIFIVLYSILLIGGLIDSVLKPFLIVV 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 286 VKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 Query: 356 ISS 358 Sbjct: 346 TCE 348 >gi|330941425|gb|EGH44238.1| hypothetical protein PSYPI_18336 [Pseudomonas syringae pv. pisi str. 1704B] Length = 359 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 128/345 (37%), Gaps = 16/345 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLILVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFLLLRDWDIMTGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTAVSIY--LLIKGN---IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +P + ++ L G + + L P LVG I L Sbjct: 245 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFFFMFGQALEGMVLTPLLVGDRIGLH 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 PVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 349 >gi|210620795|ref|ZP_03292246.1| hypothetical protein CLOHIR_00189 [Clostridium hiranonis DSM 13275] gi|210155145|gb|EEA86151.1| hypothetical protein CLOHIR_00189 [Clostridium hiranonis DSM 13275] Length = 340 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 112/327 (34%), Gaps = 10/327 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L FL G P + A ++ + PI F +K + I ++ + + L+ Sbjct: 2 LDFLIGLLMPFVIAFVLAYIFNPIIKFFENKFKAKRGASLFITYGGLIVVLLTILVMTLP 61 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + ++V+ +S + A+ + L LS F+ + Sbjct: 62 VIIESIIDIVNNAPTYFAETEQFLINVSRHLENIDAATMQEIWDKISNMLPNLSSLFVGS 121 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G I + FG ++ L+ I F+ + I L + Sbjct: 122 IGE--IFKKTFSFGKFIFNFVLAFIIC----FYILLEKEKIFDFLKKAVYVVLGDKKASF 175 Query: 204 ----SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 SR + + F G +I G++ G ++ + G + +M MIP P Sbjct: 176 VLTVSRDLNDNVGKYFTGKIFDSIIVGVLSGIGLFVLKSKYALLFGTLMGLMNMIPYFGP 235 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + + A ++ + + + P +VGG + L T + G Sbjct: 236 AIGMTPVVLINLFNDPKIALFSLIYLLVVQQVEVAFIEPKVVGGQLGLSPFLTILAVTVG 295 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 G+ G+ + +M ++ V E + Sbjct: 296 GGFFGIPGMILSTPIMGVLKVYITEYV 322 >gi|51892636|ref|YP_075327.1| hypothetical protein STH1498 [Symbiobacterium thermophilum IAM 14863] gi|51856325|dbj|BAD40483.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 359 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 115/329 (34%), Gaps = 9/329 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + + P + A ++ P + + + + + + + + + Sbjct: 21 FLVVSWALITYALPIVMPFVLAWVLAEMMDPAVTWLVRRARMPRSLAVAVVLLFFVGIMV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 Y + E++ L+ + G+ + + ++ +L Q Sbjct: 81 ALFTVGVAYVVGEIRALIRNLPYLYAAGLDISSQV-----LLYLEDLVGSLPESVQVTIG 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L+ N ++ A R G I + +++I +A FF RD I L SL Sbjct: 136 ENLGKLQANLGTYLETLARRLGFITSVPGFLINLIITFVAAFFITRDRQEIGAFLLSLFP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +++ V ++ + LV + G V G+ ++ + Sbjct: 196 AKWRDQLRQVRVEVLTNAIGWAKAQVLLILMTMLVSMLGLAIIGADYVVLAGLAIGLLDI 255 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + +Y G + L + A + + + L +VG + L L Sbjct: 256 LPIVGPGALYAPWILYSAFTGRLAFGVKLLIVYA-VVSALRQVLESKVVGDRVGLHPLAV 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G++ G LG+ GP++ L+ + Sbjct: 315 LLSIYLGIKFFGALGVVFGPLITILLKAM 343 >gi|15645192|ref|NP_207362.1| membrane protein [Helicobacter pylori 26695] gi|8928454|sp|O25291|Y567_HELPY RecName: Full=UPF0118 membrane protein HP_0567 gi|2313674|gb|AAD07623.1| membrane protein [Helicobacter pylori 26695] Length = 348 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 137/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL I +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N++K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNEQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|300711730|ref|YP_003737544.1| HTR-like protein [Halalkalicoccus jeotgali B3] gi|299125413|gb|ADJ15752.1| HTR-like protein [Halalkalicoccus jeotgali B3] Length = 389 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 116/332 (34%), Gaps = 33/332 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + Y ++ F A V+ A+ + ++ PI+ + A++A V F++ L + Sbjct: 24 AAYVVRAFIAVVVFAVFLYYSVRPIHRYL-RRFGLPRRLRAMLAIVLFGVPFLILLAYTV 82 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++E ++ V + NQ E + +++ T Sbjct: 83 AIVVIETQQFVEAYDIQNQ-------------VLNSGLERFDLAALDLDTVQRTVTTAGT 129 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH--LFPAYW 200 I + S + + + +++ ++ DG + + + + Y+ Sbjct: 130 QGSILAVFFSLSSAASVVGSVLIQSLILVVLTYYMLVDGPQLRAWVLENLDDTGIIRRYF 189 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA-----GVPSHVALGVITAIMAMIP 255 ++ + + + + + AI G+V+ Y + VP LG + I ++IP Sbjct: 190 DEVDPELSMTLFGNIVNVFVTAIV-GVVVFFTYNVFVPEAVEVPFPSLLGALAGIGSLIP 248 Query: 256 -GGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 G + + V I L I+ + G FI D +R + G Sbjct: 249 VVGIKLVYLPVGIGLAAAVVAAGQTPLLIYVGIFFVVAGVFVDFIPDFFIRALISGE--N 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + G G GLF+ PVL+ L+ Sbjct: 307 THTGMLLLSYIVGPAVFGFYGLFLVPVLLILL 338 >gi|331677560|ref|ZP_08378235.1| putative permease [Escherichia coli H591] gi|331074020|gb|EGI45340.1| putative permease [Escherichia coli H591] Length = 123 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + ++ G I+L G+ T L +W + +D +RP L+ L Sbjct: 1 MILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSG-VVGTLDNVIRPMLIRMGADL 59 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 60 PLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 108 >gi|300119211|ref|ZP_07056908.1| hypothetical protein BCSJ1_23269 [Bacillus cereus SJ1] gi|298723431|gb|EFI64176.1| hypothetical protein BCSJ1_23269 [Bacillus cereus SJ1] Length = 355 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 43 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 95 IVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFIGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPVLAVIRTV 342 >gi|167624250|ref|YP_001674544.1| hypothetical protein Shal_2326 [Shewanella halifaxensis HAW-EB4] gi|167354272|gb|ABZ76885.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 373 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 138/361 (38%), Gaps = 15/361 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 +E +PQ + +I+ +++YF G AP+L AL++ F WP+ +++ + Sbjct: 10 KERFSDPQAVTLVLILLGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQ--MARIGINRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWA 119 A + V + L ++ L + L+ + G+ + +++ P + Sbjct: 68 TAASLVLVLFIGLMLLISFGLVPSLWRQGVSLMGDLPSMIDKGLNTAQLYINQYPQFVNP 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S+L ++ + L T + I + + L + I + + +FFF + Sbjct: 128 SQL--------DTMVAELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILIPLLVFFFLK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + +K+ + + I + G I + G+V + + + Sbjct: 180 DKDELIKGSKRFFPT-NRDLARKVWSEMHQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLR 238 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLR 297 LGV+T + +IP GA + +++ ++ I + G + +D L Sbjct: 239 YAALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGISPEFGYLIVGYGIIQALDGNVLV 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L + L + ++ G+ G+F L +L+ + + + ++ Sbjct: 299 PILFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNAQGLQQQD 358 Query: 358 S 358 S Sbjct: 359 S 359 >gi|322516709|ref|ZP_08069618.1| membrane protein [Streptococcus vestibularis ATCC 49124] gi|322124742|gb|EFX96180.1| membrane protein [Streptococcus vestibularis ATCC 49124] Length = 392 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 128/360 (35%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPI---YSSF 51 +LN Q +M ++I+ +I +++ + F ++ L+I + + Sbjct: 18 ILNNQVVMAFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLVLL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K + T ++ + L + + ++ L+ Sbjct: 78 VEKTGLNRTMSILLIYAILALLLVWGISTAIPNLQDQILILIRNAPSYIARANSETERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +P LS + + T+ + +I FAS + ++II Sbjct: 138 KLPILSNFHGDLEAVLSDFSARMVNYAEHFSTSALTWIGTFASTVARVT----VAIILTP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + S F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKMKHSFVSALPTRFRKTTVRMLSDINNQLEGYVQGQVTVAIVVAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP G+ ++ V I L++G + + IE Sbjct: 254 MFKIVGLRYGMTFGILAGFLNMIPYLGSFLAMVPVVIMGLVQG-PAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ +E + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVVREIFDWYR 372 >gi|311900616|dbj|BAJ33024.1| hypothetical protein KSE_72690 [Kitasatospora setae KM-6054] Length = 371 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 93/306 (30%), Gaps = 19/306 (6%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+ +P+ F+ + A + ++ + + L + + Sbjct: 54 IPMVIALLATALLYPVMPWFVRR-GVKRGVAAGLTCAILVLVVTGGIALLVNSLVNSAPQ 112 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + S + A W + + + +D + Sbjct: 113 IASGLQQAGDRIAS-----------------WLGPFGDKVQYALKESSGSGSTLVDSLAN 155 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + + + +FFF RDG + L + + Sbjct: 156 GVLSGLGLVTQLLTGGVLALALVFFFLRDGHRFGDAMHELMPGRHADTVIACGQQAFTAM 215 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 G T+IA+ + + + GVP LG + + A IP GA +S T + L Sbjct: 216 AGFMRGTTLIALIDATFISIGLLVLGVPGAAGLGALVFMGAYIPFVGAFLSGTVAVLVAL 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + A I L+P + ++L +V G G++G + Sbjct: 276 ANGGLGTALWALGVVLAVQAIEGNILQPLIQSRTVELHPATIMIAVVAGSGIAGIIGALL 335 Query: 331 GPVLMA 336 + A Sbjct: 336 AVPVSA 341 >gi|169829827|ref|YP_001699985.1| hypothetical protein Bsph_4404 [Lysinibacillus sphaericus C3-41] gi|168994315|gb|ACA41855.1| UPF0118 membrane protein in ctaF 3'region [Lysinibacillus sphaericus C3-41] Length = 352 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 120/334 (35%), Gaps = 2/334 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I R +++ ++++ YF+ P++ A I F PI F + + S + Sbjct: 8 KLIFRLLVILSLIIAAYFIIPVSMPLILAAISAFFLEPIVMFFKRRWKMSRKIAVAFIYI 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + M ++ L + + + + S Sbjct: 68 VSVIIISIICYISITQIMTQIILLSKQAPYYISKLSDMWLHMQENISKYTEDFPPEVSTS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + +T F S F +S++ +IALF F D + + Sbjct: 128 LQKTTMDFIKKIEETFLSFFNYSKVSAFFSEIPRLFISLLVYMIALFLFMLDLPKLKRIT 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K I + ++ G V L + + +I Sbjct: 188 YKYLKPNTAKKIKIILNRLKDATLGYMKAHLFVSFIIGGVTLVGLLLIQPKYAITMTIII 247 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++P G+ I Y L+ GN A LF+ AI L I+ + + P L+G I L Sbjct: 248 WLIDIVPFLGSIIILAPWGFYHLLMGNTAIAVKLFILAAILL-IIRRVVEPKLMGDHIGL 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LPT + G++ G++GL IGP ++ + Sbjct: 307 STLPTLIAMFIGLQLFGIIGLLIGPFVIIFFIAL 340 >gi|47566578|ref|ZP_00237400.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47556608|gb|EAL14940.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 361 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFIGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQIL 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLVKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPVLAVIRTV 348 >gi|322374413|ref|ZP_08048927.1| membrane protein [Streptococcus sp. C300] gi|321279913|gb|EFX56952.1| membrane protein [Streptococcus sp. C300] Length = 388 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKHKINR-ILAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|329117036|ref|ZP_08245753.1| putative membrane protein [Streptococcus parauberis NCFD 2020] gi|326907441|gb|EGE54355.1| putative membrane protein [Streptococcus parauberis NCFD 2020] Length = 393 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 132/361 (36%), Gaps = 21/361 (5%) Query: 5 MLNPQGIMRWMIMFIILVSL-------YFLKGFFA-------PVLSALIIGFTSWPIYSS 50 +LN Q + +++ + L+++ + + F+ P++ + I+ + + P Sbjct: 18 VLNNQALSIMLVVLVFLLTILVFTKVSFLFRPIFSFLTILMLPLVISTILYYLTKP-SVD 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 I + T I ++C+ I L +M + + Sbjct: 77 LIENLGPNRTTSIFIVFGLIICILIWAFSGLIPMISNQMTTFLKDLPKYVGTVNQEANKF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + L++ + + + ID+ A F +SII Sbjct: 137 LENKWLVSYQAELQDMLTNITNKALDYAQTFSKHAIDW----AGNFAGAIARITISIIIS 192 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+F RD + + ++ + K + G +AI G++ Sbjct: 193 PFILFYFLRDSGKMKDGIVETLPTRLRKPIARVLGDINKQLSGYVQGQVTVAIIVGIMFS 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+ V G++ + M+P G+ ++ V I L++G + L ++ IE Sbjct: 253 IMFSIVGLKYSVTFGIVAGFLNMVPYLGSFLAMIPVVIMSLVQGPLMLVKVLIVF-TIEQ 311 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P ++G + + + F L+ G+ G+F+ + A + V+ KE Sbjct: 312 TIEGRFVTPLVLGNKLSIHPITIMFLLLTAGAMFGVWGVFLVIPIYASVKVVVKELFDWY 371 Query: 350 K 350 K Sbjct: 372 K 372 >gi|294651082|ref|ZP_06728419.1| membrane lipofamily protein [Acinetobacter haemolyticus ATCC 19194] gi|292823031|gb|EFF81897.1| membrane lipofamily protein [Acinetobacter haemolyticus ATCC 19194] Length = 398 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 128/338 (37%), Gaps = 24/338 (7%) Query: 28 KGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-L 81 K P + A +I + P+ S F+ + T++V+ F+ PL++ Sbjct: 26 KPIVIPFVGAFLIAYFFSPLVDVLVKIKLPRWLAISVVFIGIGVTLTVVLWFLAPLVWKQ 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + V +P +L + Q K++ E Sbjct: 86 LIYARDSIPAGIHWVNATF------------LPWMSETFDLVPMEIDTDQISKVVMEYVQ 133 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL---FFFYRDGFSISQQLDSLGEHLFPA 198 D I FA R L++ +I+ F+F D + Q L L + A Sbjct: 134 TNYSSDSIQTFALRLAQSGLNFIQIGGIIILIPIISFYFLLDWERMLQSLRRLIPRPYEA 193 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 KI R V+ + G ++ + G++ L G+ + +G++ + ++IP G Sbjct: 194 STLKIIRECHSVLGAFVKGQFLVMLLLGVIYAVGLQLIGLEVGLIIGMVAGLASIIPYLG 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFG 315 + A I L + + L + + + L+PFL+G I L + F Sbjct: 254 FAVGIIAAVIATLFQFGLDWTQLLLVGAVFLVGQMVEGYILQPFLLGDKIGLSPVAVVFA 313 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G + G LG+ I + A+I V+ + + ++++ Sbjct: 314 VLAGAQLAGFLGMLIALPVAAVIVVLLRHARDNYEKSR 351 >gi|237803519|ref|ZP_04591104.1| putative lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025501|gb|EGI05557.1| putative lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 118 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + +AG+P + LG++T + ++IP G P+ + + +L+ +G A L +WG + Sbjct: 10 IGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAVFLGIWGMFIIS 69 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VD L+P+L+ LP + G+ GG+ G +GLFIGP L+A+ Sbjct: 70 GVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAV 116 >gi|30264460|ref|NP_846837.1| hypothetical protein BA_4618 [Bacillus anthracis str. Ames] gi|47529918|ref|YP_021267.1| hypothetical protein GBAA_4618 [Bacillus anthracis str. 'Ames Ancestor'] gi|49187282|ref|YP_030534.1| hypothetical protein BAS4286 [Bacillus anthracis str. Sterne] gi|49478624|ref|YP_038441.1| hypothetical protein BT9727_4123 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141116|ref|YP_085713.1| hypothetical protein BCZK4134 [Bacillus cereus E33L] gi|165872760|ref|ZP_02217388.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167636499|ref|ZP_02394796.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167638692|ref|ZP_02396968.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170689642|ref|ZP_02880824.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170709393|ref|ZP_02899804.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177653234|ref|ZP_02935486.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190566844|ref|ZP_03019760.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196034451|ref|ZP_03101860.1| putative membrane protein [Bacillus cereus W] gi|218905585|ref|YP_002453419.1| hypothetical protein BCAH820_4470 [Bacillus cereus AH820] gi|225866372|ref|YP_002751750.1| hypothetical protein BCA_4502 [Bacillus cereus 03BB102] gi|227817169|ref|YP_002817178.1| hypothetical protein BAMEG_4655 [Bacillus anthracis str. CDC 684] gi|229601469|ref|YP_002868677.1| hypothetical protein BAA_4638 [Bacillus anthracis str. A0248] gi|254684146|ref|ZP_05148006.1| hypothetical protein BantC_09855 [Bacillus anthracis str. CNEVA-9066] gi|254724683|ref|ZP_05186466.1| hypothetical protein BantA1_19790 [Bacillus anthracis str. A1055] gi|254736493|ref|ZP_05194199.1| hypothetical protein BantWNA_15131 [Bacillus anthracis str. Western North America USA6153] gi|254741531|ref|ZP_05199218.1| hypothetical protein BantKB_11057 [Bacillus anthracis str. Kruger B] gi|254751370|ref|ZP_05203407.1| hypothetical protein BantV_02826 [Bacillus anthracis str. Vollum] gi|254757702|ref|ZP_05209729.1| hypothetical protein BantA9_05266 [Bacillus anthracis str. Australia 94] gi|301055899|ref|YP_003794110.1| membrane protein [Bacillus anthracis CI] gi|30259118|gb|AAP28323.1| putative membrane protein [Bacillus anthracis str. Ames] gi|47505066|gb|AAT33742.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181209|gb|AAT56585.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49330180|gb|AAT60826.1| probable membrane protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974585|gb|AAU16135.1| probable membrane protein [Bacillus cereus E33L] gi|164711536|gb|EDR17085.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167513540|gb|EDR88910.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167528092|gb|EDR90889.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170125692|gb|EDS94608.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170666412|gb|EDT17193.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172081516|gb|EDT66588.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190561835|gb|EDV15804.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195992993|gb|EDX56952.1| putative membrane protein [Bacillus cereus W] gi|218540217|gb|ACK92615.1| putative membrane protein [Bacillus cereus AH820] gi|225785955|gb|ACO26172.1| putative membrane protein [Bacillus cereus 03BB102] gi|227003791|gb|ACP13534.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229265877|gb|ACQ47514.1| putative membrane protein [Bacillus anthracis str. A0248] gi|300378068|gb|ADK06972.1| conserved hypothetical membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 355 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 43 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 95 IVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPVLAVIRTV 342 >gi|258510443|ref|YP_003183877.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477169|gb|ACV57488.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 375 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 109/328 (33%), Gaps = 5/328 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++L L + P + + P+ + ++ Sbjct: 19 EIVILLAFIAAFILALASLMQYILPFVIGWVFAILLIPVVRWLERR-GMKRLPSVLLVLG 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + + E VS + + + +I +S Sbjct: 78 VSVLLIVAISAGIIIGALREATSFVSHSQVFFRVQLAQIE--GEIENSESLYGQLPPQVS 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + I D + ++ FF + + + Sbjct: 136 NAVQSALTQFAHGLEGSVHKIITGLIGIVTHLPDTLFIAVISVVTAFFILQRRERMLARF 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + T I+ + ++ G P + LG++ Sbjct: 196 YRMMPPGWAPKLNAVFEDMERAFLGTIRVQFILMCLSMFLGMIGMFVLGFPYAILLGILF 255 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + ++P G+ I +I LI G++ A + + + I+ + P ++ + L Sbjct: 256 GLAGLVPIVGSAILTVPWAIVALITGHVAVAIKVLAL-QVVISIIRHAVEPKILADSVGL 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L T FGL G + MG +GLFIGP+L+ Sbjct: 315 DTLATLFGLYVGFKVMGFIGLFIGPILL 342 >gi|167745366|ref|ZP_02417493.1| hypothetical protein ANACAC_00057 [Anaerostipes caccae DSM 14662] gi|167655087|gb|EDR99216.1| hypothetical protein ANACAC_00057 [Anaerostipes caccae DSM 14662] Length = 392 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 126/340 (37%), Gaps = 8/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++F++ + FL F ++A I+ + P+ + K F + + ++V+ Sbjct: 22 FLLIFVLPKCIGFLWPF----VAAWIVAMLAHPVIAFLEDKISLPKRFGSALIIIAVIAG 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + F+ ++ + + + L + + S + + L Sbjct: 78 LIALISFIVSQLAAQIVGFAANLPDLRETVQTQLMNLKEQAVHLLDSLPYGMGVKFDTML 137 Query: 134 KILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + K + ++ + + + M A + F D I Q + Sbjct: 138 GSTDKVLDKAVSAIGNYGMEHSGNVAKGMTSGFIGTVVMFFASYLFIVDKDKIVQGYEKH 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + V+ S I + +L + LAG+ L V+ AI+ Sbjct: 198 VPKMVRHKIGIFYHNTLGVLASYCWAQVKIMVIIVAILWIGFILAGISYAFFLAVVIAIL 257 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P G + ++Y ++ G+I A L + I L + L+P ++G + + L Sbjct: 258 DVLPILGTGTAIIPWALYKILTGDIKTAIILLIIYVICLVTK-QVLQPKMMGDSMGISPL 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 T F + G++ G+ G+ + +L + ++K I K Sbjct: 317 ATLFLIYIGLKLSGIGGMLLALILGIFVYNLYKLGIFDRK 356 >gi|182436296|ref|YP_001824015.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464812|dbj|BAG19332.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 471 Score = 89.9 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 110/319 (34%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V +AL++ P + + V Sbjct: 87 LLVLAGTLWVLMRVISAVQLVVLAFAAALLVTAMLQPTVVRL-RRFGLPHGLATAVTAVL 145 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V + RW D P + S++ Sbjct: 146 GFVIIGLVGWFVVWQVMDNLDTLSDRVRDGIDE---LKRWALDSPFHVTESQI------- 195 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + TN + I + + +++ ++ + + F DG I + Sbjct: 196 -NDIAKNLSDTIGTNTEE-ITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEWSL 253 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G ++ VP V L V Sbjct: 254 KLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAIFIGFGLYVLNVPLAVPLAVFIF 313 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ ++ A + I L+PF++G +++ Sbjct: 314 LFAFIPLVGAVVSGALAVVVALVTEGVWTALWALVVVLAVQQIEGHILQPFILGRAVRVH 373 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 374 PLAVVLAVATGGLVAGIGG 392 >gi|228967465|ref|ZP_04128494.1| hypothetical protein bthur0004_42630 [Bacillus thuringiensis serovar sotto str. T04001] gi|228792242|gb|EEM39815.1| hypothetical protein bthur0004_42630 [Bacillus thuringiensis serovar sotto str. T04001] Length = 361 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|228987642|ref|ZP_04147756.1| hypothetical protein bthur0001_43120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772102|gb|EEM20554.1| hypothetical protein bthur0001_43120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 361 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFIGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQIL 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLVKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPVLAVIRTV 348 >gi|160893763|ref|ZP_02074547.1| hypothetical protein CLOL250_01317 [Clostridium sp. L2-50] gi|156864748|gb|EDO58179.1| hypothetical protein CLOL250_01317 [Clostridium sp. L2-50] Length = 432 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 110/335 (32%), Gaps = 8/335 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L F A I+ + K V +S++C+ +V + F+ Sbjct: 56 LLMPFVIGFAIAFILNVPMKGFENLLFRNEKSRWYRFRRPVCMVLSIICVVLV-IAFVIT 114 Query: 84 YGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E+ V+ + + + W ++ G + S L Sbjct: 115 MLIPEVSRTVTAIGQQFPSTMEAIKNWAVNLAAGYPDIVDRIMEIDIAWDKVSESAINLI 174 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG + F + + + + + ++ +Q L LF Sbjct: 175 KNGSGSLLSSTFNFATSVVSGIVDFVVGLFFAIYILAQKENLKRQTKGLIYALFKEKTAD 234 Query: 203 IS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + G + A GL+ + + +P + + V + A+IP Sbjct: 235 KIIKTCVMADETFANFITGQCLEACILGLMFFVSMSVLSIPYALTVSVTIVVTALIPVFG 294 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 V +L++ + + + + + P +VGG + LP + ++ Sbjct: 295 AFIGCGVGAFLILVDDPKKVLVFLILFIVLQQVEGNLIYPHVVGGSVGLPSIWVLVAVII 354 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G MG+LG+ I L +++ + KE ++ K Sbjct: 355 GGDLMGILGMLIFVPLSSVLYALVKEFVLMRLREK 389 >gi|146329499|ref|YP_001209560.1| hypothetical protein DNO_0651 [Dichelobacter nodosus VCS1703A] gi|146232969|gb|ABQ13947.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 353 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 121/338 (35%), Gaps = 20/338 (5%) Query: 14 WMIMFII-LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 W+I+F++ LY L P L A ++ + P+ + K AV+ +++ Sbjct: 7 WLIVFVMSGFLLYLLSPVLTPFLFAAVLAYLGDPLVDRIEACKIPR--LWAVVTLFALLL 64 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + ++ + + + +Q VP +L+ + M + +S Sbjct: 65 IGFAVIVLVIIPMIDQ---------QVDQISGRVPNYLNHVQKVMTPTIQKLFDISPETI 115 Query: 133 LKILSETFLK------TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ FL+ + ++ + + + + + + + F+ RD + Sbjct: 116 NADNAQKFLQDNIKSASAVLNGLFSSLKKPARAVITGVMYLFLIPVVTFYLLRDWDKLLA 175 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + +L + ++R +V+ G I+ G++ + G+ + +G Sbjct: 176 KFQALLPRKYHDDICLLARRSDEVLGGFLRGQFIVMCCLGIIYAIGLSIVGLDLGILIGF 235 Query: 247 ITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +++ +P + + + L+ + + + + L P VG Sbjct: 236 FSGLVSFVPYLGLVVGMSISALVALIQFQDWLHLFAIAAVFICGQMMEGMFLTPKFVGDR 295 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + F ++ G + G +G+ + A+I V Sbjct: 296 TGLHPVAVLFAVLTGGQFFGFMGVLLALPCAAVINVFL 333 >gi|228910226|ref|ZP_04074044.1| hypothetical protein bthur0013_43740 [Bacillus thuringiensis IBL 200] gi|228923142|ref|ZP_04086433.1| hypothetical protein bthur0011_41220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954675|ref|ZP_04116698.1| hypothetical protein bthur0006_40440 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960662|ref|ZP_04122307.1| hypothetical protein bthur0005_41240 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048098|ref|ZP_04193671.1| hypothetical protein bcere0027_40710 [Bacillus cereus AH676] gi|229071899|ref|ZP_04205110.1| hypothetical protein bcere0025_40660 [Bacillus cereus F65185] gi|229081655|ref|ZP_04214150.1| hypothetical protein bcere0023_42850 [Bacillus cereus Rock4-2] gi|229111863|ref|ZP_04241409.1| hypothetical protein bcere0018_41070 [Bacillus cereus Rock1-15] gi|229129671|ref|ZP_04258639.1| hypothetical protein bcere0015_41130 [Bacillus cereus BDRD-Cer4] gi|229146961|ref|ZP_04275325.1| hypothetical protein bcere0012_41000 [Bacillus cereus BDRD-ST24] gi|229152594|ref|ZP_04280783.1| hypothetical protein bcere0011_41290 [Bacillus cereus m1550] gi|229180666|ref|ZP_04308006.1| hypothetical protein bcere0005_40100 [Bacillus cereus 172560W] gi|228602811|gb|EEK60292.1| hypothetical protein bcere0005_40100 [Bacillus cereus 172560W] gi|228630855|gb|EEK87495.1| hypothetical protein bcere0011_41290 [Bacillus cereus m1550] gi|228636560|gb|EEK93026.1| hypothetical protein bcere0012_41000 [Bacillus cereus BDRD-ST24] gi|228653788|gb|EEL09658.1| hypothetical protein bcere0015_41130 [Bacillus cereus BDRD-Cer4] gi|228671619|gb|EEL26917.1| hypothetical protein bcere0018_41070 [Bacillus cereus Rock1-15] gi|228701659|gb|EEL54150.1| hypothetical protein bcere0023_42850 [Bacillus cereus Rock4-2] gi|228711195|gb|EEL63159.1| hypothetical protein bcere0025_40660 [Bacillus cereus F65185] gi|228723253|gb|EEL74625.1| hypothetical protein bcere0027_40710 [Bacillus cereus AH676] gi|228799026|gb|EEM45998.1| hypothetical protein bthur0005_41240 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805002|gb|EEM51598.1| hypothetical protein bthur0006_40440 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836521|gb|EEM81871.1| hypothetical protein bthur0011_41220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849390|gb|EEM94226.1| hypothetical protein bthur0013_43740 [Bacillus thuringiensis IBL 200] Length = 361 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|319408624|emb|CBI82279.1| permease protein [Bartonella schoenbuchensis R1] Length = 403 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 110/322 (34%), Gaps = 19/322 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ +++ + PI + K F ++ T+ ++ +F+ L L +++ Sbjct: 70 LLPFVAGIVLAYFLNPIVQ-LLEKVGIRRVFGTILITLFIVVIFVAALTILIPIVSWQIQ 128 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWAS--ELWTKHLSHPQSLKILSETFLKTNGIDF 148 + VS +P ++S I + S + ++ + L DF Sbjct: 129 QFVSSG---------LPIYVSRIQNFLTESNFDWVGRYFGSDPNELQTDIKVLLGQSSDF 179 Query: 149 IPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + G ++ ++ + F+ D + + +DS + I Sbjct: 180 ITSLLNSLLRSGKSIVNIFSLLVVAPVVAFYMLLDWQRMVEAVDSWIPRDHLETVRSIFY 239 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP----GGAPIS 261 + + I G + + G + G+ + +G+ +++ IP I Sbjct: 240 EMDRAIAGFVRGQGTVCLILGGYYAIGLTITGLNFGLLIGMFVGLISFIPYIGTMSGFIL 299 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V+ N + + I FI L+P LVG + L + F L Sbjct: 300 SGGVAWVQFYPDNWSRIVIVMVVFFIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFGS 359 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G G+ + A I V+ + Sbjct: 360 LFGFTGMLVAVPASAAIGVLVR 381 >gi|326776925|ref|ZP_08236190.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|326657258|gb|EGE42104.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 471 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 110/319 (34%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V +AL++ P + + V Sbjct: 87 LLVLAGTLWVLMRVISAVQLVVLAFAAALLVTAMLQPTVVRL-RRFGLPHGLATAVTAVL 145 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V + RW D P + S++ Sbjct: 146 GFVIIGLVGWFVVWQVMDNLDTLSDRVRDGIDE---LKRWALDSPFHVTESQI------- 195 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + TN + I + + +++ ++ + + F DG I + Sbjct: 196 -NDIAKNLSDTIGTNTEE-ITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEWSL 253 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G ++ VP V L V Sbjct: 254 KLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAIFIGFGLYVLNVPLAVPLAVFIF 313 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ ++ A + I L+PF++G +++ Sbjct: 314 LFAFIPLVGAVVSGALAVVVALVTEGVWTALWALVVVLAVQQIEGHILQPFILGRAVRVH 373 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 374 PLAVVLAVATGGLVAGIGG 392 >gi|289577289|ref|YP_003475916.1| sporulation integral membrane protein YtvI [Thermoanaerobacter italicus Ab9] gi|289527002|gb|ADD01354.1| sporulation integral membrane protein YtvI [Thermoanaerobacter italicus Ab9] Length = 354 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 121/354 (34%), Gaps = 11/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + I + +++ + + Y + F P + ALI P + K + Sbjct: 1 MNNYLKYSNIIKKIILIVSVFIIFYLVIFKIIPFLMPFVVALIFAVIIDPGVNFLEKKLK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPG 115 + I + ++ + + + E+ L AN + + I Sbjct: 61 VPRGLASFILLLILIGVIGSLIAITVTQLIYELSSLAEISTNYANTINDAILNLVDRI-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 +++ + S + + + F ++ + ++A F Sbjct: 119 -RTYYISLPPNITSLIESNMHSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATF 177 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D I + + + K I + K + I + L + + Sbjct: 178 FISKDKNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVI 237 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVD 293 G LG+ I+ +P G+ ++Y ++I N L + + + +V Sbjct: 238 IGFDYPFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVV-VVR 296 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 297 QMIEPKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|229175064|ref|ZP_04302582.1| hypothetical protein bcere0006_41460 [Bacillus cereus MM3] gi|228608432|gb|EEK65736.1| hypothetical protein bcere0006_41460 [Bacillus cereus MM3] Length = 361 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I K Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFDGVETK- 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 153 --IQSLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEIA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|163942140|ref|YP_001647024.1| hypothetical protein BcerKBAB4_4237 [Bacillus weihenstephanensis KBAB4] gi|163864337|gb|ABY45396.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 355 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P A I + P+ + T++++ ++I+ + Y Sbjct: 36 IFVFKVAITPFFIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I K Sbjct: 88 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFGGVETK- 146 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 147 --IQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 205 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 265 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEVA 324 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 325 GIVGLLISVPILAVIRTV 342 >gi|168487562|ref|ZP_02712070.1| transport protein [Streptococcus pneumoniae CDC1087-00] gi|183569624|gb|EDT90152.1| transport protein [Streptococcus pneumoniae CDC1087-00] Length = 388 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 109/335 (32%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKVNRVIVI-TIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + + + + L + Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVY----LEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFS 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T L + + S F +++I + LF+ RDG + L Sbjct: 157 SQATVLASKVSSQAVNWVSAFISGASQVIVALIIVPFMLFYLLRDGKGLRNYLTQFIPRK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|319946630|ref|ZP_08020864.1| membrane protein [Streptococcus australis ATCC 700641] gi|319746678|gb|EFV98937.1| membrane protein [Streptococcus australis ATCC 700641] Length = 396 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 104/321 (32%), Gaps = 5/321 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ + ++ + PI + + I + + L + L ++ Sbjct: 64 MLPVIISGLLYYLLNPIVDFLERHRVKR-IIAISIVFILIALLILWGLAVAIPAIQRQVL 122 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + D + S + ++++ Sbjct: 123 SFMKNLPDYLEKANMTIDDFLDNKVSPEIKPQLDEWTSQLSENITSWASSFSARAVNWVS 182 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + +++I M +F+ RDG ++ Q+ K+ V Sbjct: 183 NLIAVASQV----IIALIIMPFIVFYLLRDGKNLKGQIIRFLPTKIRESAGKVLSDVNTQ 238 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G +AI L+ + + G+ V LGV + +IP ++ L Sbjct: 239 LANYVRGQITVAIIVALMFILLFKIIGLRYGVTLGVTAGFLNLIPYLGSFLAMLPALVLG 298 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + +E I + + P ++G + + + F L+ G+ G+F+ Sbjct: 299 LVAGPEMFVKVVIVFIVEQTIEGRFVSPLVLGSQLNIHPITILFVLITSGSMFGIWGVFL 358 Query: 331 GPVLMALIAVIWKESIMAIKE 351 G + A V+ K+ Sbjct: 359 GIPVYASAKVVISALFEWYKD 379 >gi|323702193|ref|ZP_08113860.1| protein of unknown function UPF0118 [Desulfotomaculum nigrificans DSM 574] gi|323532880|gb|EGB22752.1| protein of unknown function UPF0118 [Desulfotomaculum nigrificans DSM 574] Length = 343 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 124/334 (37%), Gaps = 11/334 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT- 67 + + +I+ +++ LY ++G F P + A+++ + P+ SS A++ Sbjct: 11 RILFIALIIGVVIYFLYLIRGLFLPFILAIVLVYLLNPLVDRME--CRGSSRVAAILILY 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ + L++ + ++++L++ + + + + + + + Sbjct: 69 LGVIIIVTSLLMYGVPRIINQLEKLLTTIPIYSSQVEDMVNRIQQRFADSTVPPGIQQIV 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + D + S +I + F+ +D I + Sbjct: 129 DERINWAEARLLEIVRTAADLLLALVSN--------LFNIALAPVLAFYIMKDLQYIKGR 180 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L + +++R + VI + G I+ ++ A L G+ G+I Sbjct: 181 GATLIPPRCFSDTCRLAREIDHVIANFVRGHLIVVAIVTVLTSLALALVGLEFAAMFGII 240 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP P + L + + + A + + I + + P ++G + L Sbjct: 241 AGLAELIPYFGPFIGAVPPVALALLQSKWLALKVIVALFIVQQLEGNIISPKILGDSVGL 300 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L+ G + GL G+ + L A+ ++ Sbjct: 301 HPLTIIIALLAGGQLFGLAGMLLAVPLTAIARIL 334 >gi|312198923|ref|YP_004018984.1| hypothetical protein FraEuI1c_5125 [Frankia sp. EuI1c] gi|311230259|gb|ADP83114.1| protein of unknown function UPF0118 [Frankia sp. EuI1c] Length = 432 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 113/323 (34%), Gaps = 14/323 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++++++++ ++ PV++ L+I PI + A +A ++ + Sbjct: 95 VYVVVIAIGRVRSIVIPVVAGLLISALIVPIAQRL-QRVGVPRLASAFLALLTFFVILGG 153 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + E+ +V +V N V +L++ P + ++ S SL Sbjct: 154 VAVGVGFNAANELPTVVDQV---NNGIGQVRDYLTNGPLHLSQKQITDLIDSVQHSL--- 207 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 T + + ++ S++ + A FFF DG I + S Sbjct: 208 ------TANRGKVVSQVITTASVLVEVLASLLVTVFATFFFVYDGAGIWNWIVSRFPPSA 261 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + R + G +IA + L + G P L ++T IP Sbjct: 262 EERVRGAGREAWATLTGYIRGTVLIAFTDALGISIGLVSVGTPLVAPLALLTFFGGFIPI 321 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA ++ TA + L+ + A + + + P ++ + L L Sbjct: 322 VGATVAGTAAVLVTLVAKGLVPAIIVLCVVVVVQQFEGHVMHPLVMRRAVNLHPLAIVIS 381 Query: 316 LVGGVRTMGLLGLFIGPVLMALI 338 L G G+ G +A+I Sbjct: 382 LSAGAVLAGIPGAIAAVPTVAVI 404 >gi|300859323|ref|YP_003784306.1| hypothetical protein cpfrc_01906 [Corynebacterium pseudotuberculosis FRC41] gi|300686777|gb|ADK29699.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302207004|gb|ADL11346.1| Putative integral membrane protein [Corynebacterium pseudotuberculosis C231] gi|308277257|gb|ADO27156.1| Putative integral membrane protein, predicted permease [Corynebacterium pseudotuberculosis I19] Length = 453 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 97/302 (32%), Gaps = 14/302 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP SKK +I + + + K+LV + Q Sbjct: 97 VLWPPVRWLRSKKVP-PATAVLIVAIGFFGAIGSIFAAMAPSVSSQSKDLVDRANEGVQR 155 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + W P + S++ + Q+L+ S + +I + Sbjct: 156 AL---HWAEHGPLNLDTSQVDGYIQNVTQALQEHSRNIANGVFSGLTTASSILITIILML 212 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 FFF +DG + + + ++ + V+ I++ Sbjct: 213 IL---------SFFFLKDGTRFLPMVRRVAGPNLGWHLTEVLTRIWNVLAGFIRAQAIVS 263 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL 281 + + +++G + VP + L V+T IP GA + + L+ + NA Sbjct: 264 LVDAVLIGIGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGVSNAIFA 323 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I L+P L + L + G ++G F+ + A +AV+ Sbjct: 324 LILIITVQQIEGHILQPVLQSRAMNLHAAVVLLSVTIGSALFSVVGAFLAVPVAATLAVL 383 Query: 342 WK 343 + Sbjct: 384 IR 385 >gi|293365292|ref|ZP_06612009.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307703832|ref|ZP_07640773.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291316742|gb|EFE57178.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307622667|gb|EFO01663.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 388 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|261209281|ref|ZP_05923673.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289567000|ref|ZP_06447401.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553987|ref|ZP_06674589.1| transport protein [Enterococcus faecium E1039] gi|294615275|ref|ZP_06695152.1| transport protein [Enterococcus faecium E1636] gi|294617337|ref|ZP_06696976.1| transport protein [Enterococcus faecium E1679] gi|260076827|gb|EEW64562.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161201|gb|EFD09100.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291591872|gb|EFF23504.1| transport protein [Enterococcus faecium E1636] gi|291596410|gb|EFF27664.1| transport protein [Enterococcus faecium E1679] gi|291601844|gb|EFF32094.1| transport protein [Enterococcus faecium E1039] Length = 379 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 15/320 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L A I + PI + + F+V ++ + Sbjct: 40 MLSAIFLPLLVAGFIYYMFDPIVVFLEKHRIPR--------VFGFLLTFLVVIILVVLTV 91 Query: 86 MLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +L+ + + Q WL+++ E +L + LS + L Sbjct: 92 MNVVPQLMEQTIQLTQSLPTYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNL 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S+ + + + + + L F ++DG L + Sbjct: 149 FNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELR 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + + A+ G++ A + P + L VI I +IP P Sbjct: 209 QTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVGPFI 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I + + + F A + L + + ++P L G + + L L+G Sbjct: 269 GAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGS 328 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ I + A+I I Sbjct: 329 VAGILGMLICIPVYAVIKTI 348 >gi|297379768|gb|ADI34655.1| membrane protein [Helicobacter pylori v225d] Length = 349 Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 137/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL I +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L G++ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGHVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|184155884|ref|YP_001844224.1| hypothetical protein LAF_1408 [Lactobacillus fermentum IFO 3956] gi|183227228|dbj|BAG27744.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length = 369 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 124/346 (35%), Gaps = 10/346 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 30 FVFTPLLVFVSVVITPLVISLFLYYMLNPLFRLLMKIRIYKWHMKRGIASLVVVIGLVLI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L + E+ +++ + A + + + +S+ P + ++ + Sbjct: 90 VVGGISALIPSVLNELNQVIHWLPQAAKESQKMIQEISEHPWVLKL-----HLSTYYGQI 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ S G I ++I + LF+ ++DG + + L Sbjct: 145 NDQVSKYVRQIVTGLTSSAGSIIGTITSTVIVAITV-PVMLFYMFKDGNRLVPSVQKLFP 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + + + S G I + + Y + G P V LGV+ I M Sbjct: 204 ENSRDEVGELLRKMSQTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANM 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + I I + P ++G +++ L Sbjct: 264 IPYVGPYIGITPSLMVSIAVAPEKIVWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G+ G+ + A++ I I K + +N Sbjct: 324 MLLLAAGNIAGIPGMILCIPCYAVVKTIVTYLISIYHLRKREGDNN 369 >gi|220921717|ref|YP_002497018.1| hypothetical protein Mnod_1725 [Methylobacterium nodulans ORS 2060] gi|219946323|gb|ACL56715.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 680 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 114/356 (32%), Gaps = 30/356 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ II+ +LYF + P+ A+++ F WP+ + + T +A V+ + + Sbjct: 33 LLVAAIIVAALYFGREILIPIAIAVLLSFVLWPL-VGLLRRLPIGRTAAIGLAVVTCIGI 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQ 131 L +++ +L + + + L + P G A + + +HL Sbjct: 92 V----GLLAGVIGMQVADLGTGLPRYQRTIERKLENLKEGPVGSIAGYMRSIGRHLQQAG 147 Query: 132 SLKILSETFLKTNGIDFIPR---------------------FASRFGMIFLDYCLSIIFM 170 S+ + G PR A R L + + Sbjct: 148 SMPEDKDKPPVPRGATSEPRVQNPDKPVLVEVRERDLAPVELAERLLSPVLAPLATTGIV 207 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L F + +L L + + FL + G+ +G Sbjct: 208 FVVLMFILAQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRFFLVQLGLNASFGVAIG 267 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 WL GVPS + G+ +A+M +P + + L + L + Sbjct: 268 IGLWLIGVPSPILWGIFSALMRFVPYIGAFLSALLPLALAAAVDPGWNMVLATAALFLVL 327 Query: 291 --IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +V + P L G L + G +GL + L + V+ + Sbjct: 328 EPLVGHVIEPLLYGHSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 383 >gi|315613061|ref|ZP_07887972.1| membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315171|gb|EFU63212.1| membrane protein [Streptococcus sanguinis ATCC 49296] Length = 388 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VLAISIVFVVIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|253577293|ref|ZP_04854611.1| sporulation integral membrane protein YtvI [Paenibacillus sp. oral taxon 786 str. D14] gi|251843297|gb|EES71327.1| sporulation integral membrane protein YtvI [Paenibacillus sp. oral taxon 786 str. D14] Length = 372 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 116/349 (33%), Gaps = 12/349 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + ++++Y+L P L A +I + P+ F + ++ + Sbjct: 17 IVLIVSVLAIYWLLPLGYPFLIAWLIAYAMNPLVLWFQRHLQVPKWLAVTLSLFIYVGSA 76 Query: 75 IVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + E+ + + W +E+ +P Sbjct: 77 GIIVSAALTRLVKELIHFAESFDHRIAEWRNLLISWTQSEGIQSIITEINRFIADNPGYE 136 Query: 134 KILSETFLKTN---------GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + T I+ + + + + +++A FF Sbjct: 137 NTIHKNIDNTAERFGSFVSRLINHVLETIVNLLSSLPNLGVILGVILLATFFISNHWERD 196 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + F I R + + + I+ ++ + GV S Sbjct: 197 MRFLAASVPAPFRKTVGAIWRDLQRALSGYLRAQFIMISITAFIVLIGLLILGVDSAFTY 256 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ ++P G IY G+ L + + L + + + P ++ Sbjct: 257 ALLIGLVDLLPYLGVGTVMIPWLIYAFATGHDTLGIGLAVLYGVIL-LARQLIEPKVLAS 315 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L LPT + G++ G+LGL IGPV + ++ + ++ N Sbjct: 316 SVGLDPLPTLIAMFVGLKLFGVLGLIIGPVTLVILGAAVRAGVVRDLRN 364 >gi|326942172|gb|AEA18068.1| hypothetical protein CT43_CH4407 [Bacillus thuringiensis serovar chinensis CT-43] Length = 355 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 36 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ R G+ T + K+ Sbjct: 88 GIYKGTPVVIKQLQEINEQFPQFTRMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 144 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 145 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 205 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 265 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 324 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 325 GIVGLLISVPILAVIRTV 342 >gi|331266486|ref|YP_004326116.1| conserved hypothetical protein, permease,putative [Streptococcus oralis Uo5] gi|326683158|emb|CBZ00776.1| conserved hypothetical protein, permease,putative [Streptococcus oralis Uo5] Length = 388 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIIEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|317473090|ref|ZP_07932389.1| sporulation integral membrane protein YtvI [Anaerostipes sp. 3_2_56FAA] gi|316899428|gb|EFV21443.1| sporulation integral membrane protein YtvI [Anaerostipes sp. 3_2_56FAA] Length = 381 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 126/340 (37%), Gaps = 8/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++F++ + FL F ++A I+ + P+ + K F + + ++V+ Sbjct: 11 FLLIFVLPKCIGFLWPF----VAAWIVAMLAHPVIAFLEDKISLPKRFGSALIIIAVIAG 66 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + F+ ++ + + + L + + S + + L Sbjct: 67 LIALISFIVSQLAAQIVGFAANLPDLRETVQTQLMNLKEQAVHLLDSLPYGMGVKFDTML 126 Query: 134 KILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + K + ++ + + + M A + F D I Q + Sbjct: 127 GSTDKVLDKAVSAIGNYGMEHSGNVAKGMTSGFIGTVVMFFASYLFIVDKDKIVQGYEKH 186 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + V+ S I + +L + LAG+ L V+ AI+ Sbjct: 187 VPKMVRHKIGIFYHNTLGVLASYCWAQVKIMVIIVAILWIGFILAGISYAFFLAVVIAIL 246 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P G + ++Y ++ G+I A L + I L + L+P ++G + + L Sbjct: 247 DVLPILGTGTAIIPWALYKILTGDIKTAIILLIIYVICLVTK-QVLQPKMMGDSMGISPL 305 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 T F + G++ G+ G+ + +L + ++K I K Sbjct: 306 ATLFLIYIGLKLSGIGGMLLALILGIFVYNLYKLGIFDRK 345 >gi|229032040|ref|ZP_04188023.1| hypothetical protein bcere0028_40850 [Bacillus cereus AH1271] gi|228729285|gb|EEL80279.1| hypothetical protein bcere0028_40850 [Bacillus cereus AH1271] Length = 361 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 151 TKIQSLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEIA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|229163339|ref|ZP_04291291.1| hypothetical protein bcere0009_41050 [Bacillus cereus R309803] gi|228620120|gb|EEK76994.1| hypothetical protein bcere0009_41050 [Bacillus cereus R309803] Length = 361 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGVGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I K Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFGGVETK- 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 153 --IQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL + ++A+I + Sbjct: 331 GIVGLLVSVPILAVIRTV 348 >gi|196044927|ref|ZP_03112161.1| putative membrane protein [Bacillus cereus 03BB108] gi|196024415|gb|EDX63088.1| putative membrane protein [Bacillus cereus 03BB108] Length = 355 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 36 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 88 GIYKGTPIVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVE 144 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 145 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 205 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 265 IPALMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 324 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 325 GIVGLLISVPVLAVIRTV 342 >gi|313887849|ref|ZP_07821529.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846192|gb|EFR33573.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 402 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 14/349 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVS 69 I L L G AP + +I F + F K + T I+ + Sbjct: 46 IFSGLGVLLGVIAPFILGGVIAFIMKIPLNFFERKVLDKIKNEKFQKHKRTISIAISFIV 105 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + + EL + Q I R + + + +LS Sbjct: 106 IILAIFIITAIIVPQLINSFNELRKSLPSFLQMAIDKTREIPYLSNYSDKLQAEYDNLSW 165 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +I A L +S +I + D + Q Sbjct: 166 NEIFNRVRSFVKSDEQSSYILNSALSTASSILGGLVSFFLALITSIYILADKERLGYQAT 225 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMT----IIAIGEGLVLGSAYWLAGVPSHVALG 245 + F V ++ F G ++ G+ L +P+ +G Sbjct: 226 RICYSCFNNKVANKILHVAHLLHENFFGFIRGQLTVSSFIGIATFVCCLLLRIPNAATIG 285 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + ++P P A++ +++ + + I I + P LVG + Sbjct: 286 VIVGVTDLVPIIGPFIGGAMAFVMIVIEDPTKGLMFIVLILILQQIESNLVYPKLVGNEV 345 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L T + G G++G++ L + + + KE K Sbjct: 346 GLPSLWTLVAITIGGSLFGVVGMWAFIPLASTLYALMKEYTEYKINEKN 394 >gi|294790628|ref|ZP_06755786.1| putative membrane protein [Scardovia inopinata F0304] gi|294458525|gb|EFG26878.1| putative membrane protein [Scardovia inopinata F0304] Length = 530 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 115/359 (32%), Gaps = 24/359 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 ++ P+ + R ++ +I V L + ++ +L I P+ I Sbjct: 62 DSRRPPEWLGRGLLYAVIAVFLAIFVWNSWSKISSVVFYIIVSLFIALALEPLILRLIRH 121 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI- 113 + +++ S + L +V L + ++ +++ + P SDI Sbjct: 122 -GWKRSAASLVVLASFVILVVVFLSMFGLLLVQQLTKMIENL----------PNTYSDIR 170 Query: 114 -PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 W K L +L K +I A FL L+I+ +++ Sbjct: 171 RNIISWTGYHLPKKLDFGTNLLSFLNKINKNGAQGYI-SQAYSTVSSFLSGLLAILTILL 229 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 ++ G + + L + + V I + +++I + + Sbjct: 230 VTYYICAAGPRMRRSLCKWLPRKSQRKFIVVWTTVQTQISNYLYSRFLLSIISAICMSIF 289 Query: 233 YWLAGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + +P + L + +++ IP G + + A L ++ + Sbjct: 290 MIVMKIPYWLPLSIFCGLVSQFIPTIGTYLGGLVPIVSAWGTNGWQYAVYLLIYIVVYQQ 349 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + L P + + L + G LG F+ + A + + + + Sbjct: 350 IENLILSPRISKDTMDLNPAIALLSVFFFGDLFGALGAFLALPITASLQALLSAYMRSY 408 >gi|314936488|ref|ZP_07843835.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] gi|313655107|gb|EFS18852.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] Length = 409 Score = 89.5 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 110/293 (37%), Gaps = 5/293 (1%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +++ +F+V + L + + ++ + + + + + Sbjct: 95 LLAITIVFLVIIGGATLIIDLLIPVIGDQIKQLANNFPKYIEKFNRAIDKVTHMSILSSF 154 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI----IALFFFYRDGF 182 + Q + + + D+ F ++ F + +++ +I LFF +DG Sbjct: 155 YNQIQDWLDSTSKKIPSLTSDYFSGFGTKI-RTFAEAVVNVGVVIATTPFVLFFMLKDGT 213 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + F + + + + S G I++ G++L Y + G+ + Sbjct: 214 KFRDYTTKIVPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGL 273 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L I A+ +++P P + +I + I + F L + + FI + P ++G Sbjct: 274 VLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFISPNIMG 333 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ L F L+ +G++G+ +G A++ V+ + K K Sbjct: 334 KTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRRYNK 386 >gi|291449878|ref|ZP_06589268.1| integral membrane protein [Streptomyces albus J1074] gi|291352827|gb|EFE79729.1| integral membrane protein [Streptomyces albus J1074] Length = 369 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 114/351 (32%), Gaps = 17/351 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ + +L+ + ++ P++ L++ +WP+ + F+ A + Sbjct: 21 SAQLLLVAVAVTAALWLVGQMWSVVWPLVVGLLLTTLTWPL-ARFLRNHSWPPALAASVV 79 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV + + + + E L V+ + L G + + Sbjct: 80 TVFALVVAAGIVALIAVPVASESGTLADGVIAGVEQ-------LRTWAAGPPLNIGDAEI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + ++ L ++ + + +FFF +DG Sbjct: 133 TKAMDAGIERLQSSLGATVSTVATGLSTVVHGVVVAVIAVF-----LMFFFLKDGPRFLP 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ + + ++ + + + +G W+ GVP + L V Sbjct: 188 WLTRQLPGRLAVDIPTVAERCWNTLGAFIRSQALVGLIDAVFIGLGLWILGVPLVLPLSV 247 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + A +P GA + + L+ + +A + + + +P + + Sbjct: 248 LTFVGAFVPIVGAFFAGFVAVLIALVSNGLTDALIVLAIIIVVQQLEGNVFQPMIQSRGL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + G G++G + ALI VIW+ + E + Sbjct: 308 GLHAAVVLLAVTLGGSLAGIVGSLLAVPAAALIGVIWRYIREQLAEPPHEP 358 >gi|226952105|ref|ZP_03822569.1| PerM family permease [Acinetobacter sp. ATCC 27244] gi|226837161|gb|EEH69544.1| PerM family permease [Acinetobacter sp. ATCC 27244] Length = 398 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 128/338 (37%), Gaps = 24/338 (7%) Query: 28 KGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-L 81 K P + A +I + P+ S F+ + T++V+ F+ PL++ Sbjct: 26 KPIVIPFVGAFLIAYFFSPLVDVLVKIKLPRWLAISVVFIGIGVTLTVVLWFLAPLVWKQ 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + V +P +L + Q K++ E Sbjct: 86 LIYARDSIPAGIHWVNATF------------LPWMSETFDLVPMEIDTDQISKVVMEYVQ 133 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL---FFFYRDGFSISQQLDSLGEHLFPA 198 D I FA R L++ +I+ F+F D + Q L L + A Sbjct: 134 TNYSSDSIQTFALRLAQSGLNFIQIGGIIILIPIISFYFLLDWERMLQSLRRLIPRPYEA 193 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 KI R V+ + G ++ + G++ L G+ + +G++ + ++IP G Sbjct: 194 STLKIIRECHSVLGAFVKGQFLVMLLLGVIYAVGLQLIGLEVGLIIGMVAGLASIIPYLG 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFG 315 + A + L + + L + + + L+PFL+G I L + F Sbjct: 254 FAVGIIAAVVATLFQFGLDWTQLLLVGAVFLVGQMVEGYILQPFLLGDKIGLSPVAVVFA 313 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G + G LG+ I + A+I V+ + + ++++ Sbjct: 314 VLAGAQLAGFLGMLIALPVAAVIVVLLRHARDNYEKSR 351 >gi|16079795|ref|NP_390619.1| permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310678|ref|ZP_03592525.1| hypothetical protein Bsubs1_14976 [Bacillus subtilis subsp. subtilis str. 168] gi|221315001|ref|ZP_03596806.1| hypothetical protein BsubsN3_14892 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319922|ref|ZP_03601216.1| hypothetical protein BsubsJ_14803 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324203|ref|ZP_03605497.1| hypothetical protein BsubsS_14947 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312267|ref|YP_004204554.1| putative permease [Bacillus subtilis BSn5] gi|8928489|sp|O34472|YRRI_BACSU RecName: Full=UPF0118 membrane protein yrrI gi|2635187|emb|CAB14683.1| putative permease [Bacillus subtilis subsp. subtilis str. 168] gi|320018541|gb|ADV93527.1| putative permease [Bacillus subtilis BSn5] Length = 353 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 123/330 (37%), Gaps = 15/330 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +K F P++ ++ I + P+ K T+S++ ++++ + + Sbjct: 37 LVIKTIFIPLIISIFISYLLLPVTEWLHGKGLPR--------TLSILVIYVLFFGGIGWA 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L+ ++ +++ + + + P + + ++ Sbjct: 89 LYKGVPVLIVQLTDLSENIPMFAETYNGL-----LLHVHNHTDDWPDGMHHRIDKMIRQT 143 Query: 145 GIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F LDY L + +F+ +D + + + L + Sbjct: 144 EAFFAGTIEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ + G++ G ++W+ G+P + LG+I+ + +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLISGVTNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + ++ + + I F+ L PF+VG +K+ + L+ G Sbjct: 264 AVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ + A++ V+ + E+ Sbjct: 324 AGIVGMILAVPATAVLKVMMIHFLRMRTEH 353 >gi|163745974|ref|ZP_02153333.1| hypothetical protein OIHEL45_10318 [Oceanibulbus indolifex HEL-45] gi|161380719|gb|EDQ05129.1| hypothetical protein OIHEL45_10318 [Oceanibulbus indolifex HEL-45] Length = 360 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 114/339 (33%), Gaps = 14/339 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +V+L+F+ P L I + P+ + S + TV+ + +F++ Sbjct: 16 AAVFMVALWFMGDVLLPFLLGGAIAYFLDPVADRLE-RLGLSRVMATALITVAAILIFVL 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + L+ ++ P + L+ + Sbjct: 75 MALLVVPTLVNQTVNLIETAPQVTRNFTDFIT--DRFPSLLDDDSTLRTSLTTLGTTIQE 132 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + ++ L + + + + D + +D L Sbjct: 133 RGGELFQTALASFAS--------LINILLLFVIVPVVAVYLLLDWDRMVAGIDRLLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++R + + S GM + + G A L G+ + +G I ++ IP Sbjct: 185 APTIRQLAREIDATLASFVRGMGTVCLILGTYYAVALMLVGLQFGLVVGFIAGLVTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A++I L + G+ + + + + L P LVG + L + Sbjct: 245 LGALIGGALAIGLALFQFWGDWLSIGLVAGIFVLGQIVEGNLLTPKLVGNSVGLHPVWLL 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +GL + + A I VI + + +E+ Sbjct: 305 LALSVFGTLFGFVGLLVAVPVAAAIGVIARFATARYRES 343 >gi|75761648|ref|ZP_00741597.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902918|ref|ZP_04067059.1| hypothetical protein bthur0014_40860 [Bacillus thuringiensis IBL 4222] gi|74490869|gb|EAO54136.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856702|gb|EEN01221.1| hypothetical protein bthur0014_40860 [Bacillus thuringiensis IBL 4222] Length = 361 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 111/318 (34%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGC 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPILAVIRTV 348 >gi|317180338|dbj|BAJ58124.1| membrane protein [Helicobacter pylori F32] Length = 348 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 136/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F VL A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDVLIAGLLCVGFFQVKVFLDKRFLN--LISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLVLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|311743144|ref|ZP_07716952.1| integral membrane protein [Aeromicrobium marinum DSM 15272] gi|311313824|gb|EFQ83733.1| integral membrane protein [Aeromicrobium marinum DSM 15272] Length = 367 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 103/294 (35%), Gaps = 10/294 (3%) Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGG 116 ++AT+ V + I L+ L ++ ++ ++ G+ + W P G Sbjct: 64 RLGLPRLLATLVVTVVMITGLVGLLVLIGQQLSTQFDELRVSVVDGVGQIEDWARTGPLG 123 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + + D A+ G+ + + A F Sbjct: 124 LS--------DDQISDYVTRVQDAIASTDTDTAIGQATSLGVTLTHFVTGFFIALFAAIF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +G I L +L + + S ++A + + + L Sbjct: 176 FLYEGDRIWAWLVTLFPRSARGRINSSGHRAWESLTSFVRATMVVAFIDAVGIALVALLL 235 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 GVP +A+GV+ + A +P GA +S + L+ + A + L I Sbjct: 236 GVPLALAIGVLVFLGAFVPIVGAFLSGMVAVLVALVAQGPWTALFMLLGVIAVQQIESNV 295 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+PF++G + + L +V G+ G++G + + A++ + K Sbjct: 296 LQPFVMGRLVAVHPLAIILAIVAGITVAGIVGALVAVPIAAMLNGVVKHLAEEA 349 >gi|297567386|ref|YP_003686358.1| hypothetical protein Mesil_3012 [Meiothermus silvanus DSM 9946] gi|296851835|gb|ADH64850.1| protein of unknown function UPF0118 [Meiothermus silvanus DSM 9946] Length = 369 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 103/333 (30%), Gaps = 14/333 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 VL A++ + + PI F ++ + + V+ ++ + Sbjct: 41 IVTVLIAVVFSYITSPIVRWFERRRLSRALGVVVVFVGFLLF-----VALASVLLANMAG 95 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + P+ W +PG EL +T L+ + Sbjct: 96 QLAGFLTGLPNLLAPLLDWAQALPGRFGQIELPQPVRDALAQASSSIQTLLQGFTQSLLR 155 Query: 151 RFASR---------FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F + ++ + + D I+ L + Sbjct: 156 LLQALLAQGGNLIGFFSNLVGGIFQLLTALTISIYLLYDLPKIAHTLLKAIPEPYQPMAL 215 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++S+ + S G ++A G ++ + GVP +LG +T I IP I Sbjct: 216 EVSQKADRAFGSFVRGQVLVATISGTIVAVGLSIVGVPQAASLGFLTFIFNFIPFVGVII 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I L + + + PF++ + + + G++ Sbjct: 276 SAIPAILLALPLGWLKLALTVGVLYLTNQLEGNVYGPFVMRRAVSIHPVTGIIGILIASS 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ ++A +++ + + +E Sbjct: 336 LFGFIGVLFSTPMLAFFKILYVDYYQKSRFYRE 368 >gi|308061898|gb|ADO03786.1| membrane protein [Helicobacter pylori Cuz20] Length = 348 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 138/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--IVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL I +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G+ G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|257869140|ref|ZP_05648793.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803304|gb|EEV32126.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 374 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 117/334 (35%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + + + ++ + ++ ++ ++ + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPIVVFLMKTTKIKRIYAVILVLLLLVAAIVLTVVSVIPNL 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +L + ++ ++D P + LS L Sbjct: 100 INQISQLAENIPTFAKNMETWISKIADDPVFKQID------FAQQLENLNLSYGSLLQQF 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + I+ + LF+ +DG + + S+ ++ Sbjct: 154 LSGLSTSLGSIVGTIASATMIIVTVPFILFYMLKDGEKLVPNIQSVLPEKRRNQIIELLG 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I I YWL GV GVI I +IP P Sbjct: 214 DLNKTLSNYISGQAIECIFVATFTFIGYWLVGVNYAFLFGVIAGITNLIPYLGPYLGLIP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I + F A + + + + P ++G + + L L+ GL Sbjct: 274 AVLVTIFDDPFRALLCGVVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLLVAGNIAGL 333 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I I+++K K + Sbjct: 334 LGIFLGVPFYAICRTIVIFVIRLIRDDKSKKNQE 367 >gi|257885399|ref|ZP_05665052.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257821255|gb|EEV48385.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 379 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 15/320 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L A I + PI + + F+V ++ + Sbjct: 40 MLSAIFLPLLVAGFIYYMFDPIVVFLEKHRIPR--------VFGFLLTFLVVIILVVLTV 91 Query: 86 MLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +L+ + + Q WL+++ E +L + LS + L Sbjct: 92 MNVVPQLMEQTIQLTQSLPTYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNL 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S+ + + + + + L F ++DG L + Sbjct: 149 FNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELR 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + + A+ G++ A + P + L VI I +IP P Sbjct: 209 QTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVGPFI 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I + + + F A + L + + ++P L G + + L L+G Sbjct: 269 GAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGS 328 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ I + A+I I Sbjct: 329 VAGILGMLICIPVYAVIKTI 348 >gi|330998169|ref|ZP_08321995.1| hypothetical protein HMPREF9442_03104 [Paraprevotella xylaniphila YIT 11841] gi|329568861|gb|EGG50659.1| hypothetical protein HMPREF9442_03104 [Paraprevotella xylaniphila YIT 11841] Length = 420 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 116/343 (33%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + L L P A + + +P F K + L + T+ ++ I Sbjct: 21 LGLSIYVLNLLSTVLLPFFIAWFLAYMIYPTVKFFQYKLHLHNRILCIAITLLLILAAIA 80 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L + +++ V + + + +++ +++L Sbjct: 81 GFFWLI------IPPAIAEFVRFRDLIADFIKETGNSTITRSIEIFFQQNIDQNAFIRLL 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 E + I + S F + L +++ LFF D +S+ L Sbjct: 135 HENNVMEALKVAINQLWSLVSQTFDFIIAILGFCMVLLYLFFILLDYEKLSEGWIKLVPK 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ V + S F G ++A G++ + + P + LG+ + ++ Sbjct: 195 RSRRFAAELVDDVQHGMNSYFRGQALVAFLVGILFSIGFLIIDFPLAIGLGMFIGFLNLV 254 Query: 255 PGGAPISFTAVSIYLLI----KGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLP 308 P I F + L+ G F L + + I D L P ++G + L Sbjct: 255 PYMQAIGFIPTLLLALLKANDTGESFWLILLSACIVFIVVQSIQDAFLVPKIMGKLMGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L +GL+GL I L L+ ++ I + Sbjct: 315 PAVILLSLSVWGYLLGLIGLIIALPLTTLLLSYYRRFIERDER 357 >gi|299538203|ref|ZP_07051488.1| hypothetical protein BFZC1_19390 [Lysinibacillus fusiformis ZC1] gi|298726405|gb|EFI66995.1| hypothetical protein BFZC1_19390 [Lysinibacillus fusiformis ZC1] Length = 352 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 121/334 (36%), Gaps = 2/334 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I R +++ +L++ YF+ P++ A I F PI F K + S + Sbjct: 8 KLIFRLIVIISLLLAAYFIIPVSMPLILAGISAFFLEPIVMFFKRKWKMSRKIAVAFIYI 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + M ++ L + + + + S Sbjct: 68 VSVIVISIICYLSITQIMTQIILLSKQAPYYISKLSDMWLHMQENISKYTEDFPPEVSAS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + ++ F S F +S++ +IALF F D + Q Sbjct: 128 LQKTTMDFIKKVEESFLSFFNYSKVSAFFSEIPSLFISLLVYMIALFLFMLDLPKLKQIT 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K I + ++ G V L V + +I Sbjct: 188 YKYLKPNTAKKIKIILNRLKDATFGYMKAHLFVSFIIGGVTLIGLLLIQPKYAVTMTIII 247 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++P G+ I +Y L+ GN A LF+ AI L I+ + + P L+G I L Sbjct: 248 WLIDIVPFLGSIIILAPWGLYHLLMGNTSIAVKLFILAAILL-IIRRVVEPKLMGDHIGL 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LPT + G++ G++GL +GP ++ + Sbjct: 307 STLPTLISMFIGLQLFGIIGLLVGPFVIIFFIAL 340 >gi|218899559|ref|YP_002447970.1| hypothetical protein BCG9842_B0726 [Bacillus cereus G9842] gi|218541668|gb|ACK94062.1| putative membrane protein [Bacillus cereus G9842] Length = 355 Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 36 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 88 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 144 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 145 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 205 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 265 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 324 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 325 GIVGLLISVPILAVIRTV 342 >gi|304391982|ref|ZP_07373924.1| ATP/GTP-binding protein [Ahrensia sp. R2A130] gi|303296211|gb|EFL90569.1| ATP/GTP-binding protein [Ahrensia sp. R2A130] Length = 369 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 105/334 (31%), Gaps = 17/334 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ L + P ++ + + + P+ K S I + +F + Sbjct: 22 FVVTVLFLIVFRSILLPFIAGMALAYMLDPVADKLE-KLGASRLLATTIILFVFIIMFAL 80 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ L + L+ ++ + + + Sbjct: 81 ALILLVPVLSNQFSGLIQRMPSYVTSLQSLIASVEK--------PWLRDLVGESADNIRE 132 Query: 137 SETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L G + G +D ++ I F+ D ++ +++S Sbjct: 133 NLDGLLQQGAGWASTVLGSIWQSGKALVDVLSLLVITPIVAFYLLLDWDRMTAKVESWLP 192 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 I+ + I G + + G LAG+ + +G+I +++ Sbjct: 193 RQHKGELTGIADDMNAAIAGFVRGQGTVCLILGTFYALGLTLAGLNFGLLIGMIAGLISF 252 Query: 254 IPG----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I V++ I+ ++ A+ F L+P LVG + L Sbjct: 253 IPFVGSIIGAILAIGVALVQFWPDYIWIGVIAGIF-AVGQFFEGNFLQPKLVGESVGLHP 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F L MG GL I + A I V+ + Sbjct: 312 VWLMFSLSAFGALMGFTGLLIAVPVAAAIGVLVR 345 >gi|302532542|ref|ZP_07284884.1| integral membrane protein [Streptomyces sp. C] gi|302441437|gb|EFL13253.1| integral membrane protein [Streptomyces sp. C] Length = 367 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 123/350 (35%), Gaps = 18/350 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVS 69 +++ ++ ++ ++ G V+ LI+ +WP+ ++F+ ++ A + TV Sbjct: 20 LLVVLVMAAAVLWVLGRMWSVIWPLIVALLLTTLTWPL-AAFLRRRGWPPALAASVVTVL 78 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + ELV V Q + W + P + ++ + Sbjct: 79 FLLAAAGIVALIAVPVASQSGELVDGVAAGIQ---QLREWAAGPPLNIGNDQITGAFDAA 135 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ + + T + ++ + + +FFF +DG L Sbjct: 136 VARLQNSVGSAVSTVATGV---------STVFNGLVTAVLAVFLMFFFLKDGPRFLPWLT 186 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + + S + + + + +G W+ GVP + L V+T Sbjct: 187 RQLPGRLGTDVPVVAARGWQTLGSFVRSQAFVGLLDAVFIGLGLWIVGVPLVLPLAVLTF 246 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P GA + + L+ + +A + + +P + + L Sbjct: 247 VSAFVPIVGALFAGLVAVLIALVSNGLTDALIVLAIIVAVQQLEGNVFQPMIQSRGLGLH 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + AL+AV+W + E ++ Sbjct: 307 AAVVLLAVTLGGSLAGVVGSLLAVPAAALVAVVWNYLRDQLGEPPHDPAA 356 >gi|121594252|ref|YP_986148.1| putative GAF sensor protein [Acidovorax sp. JS42] gi|120606332|gb|ABM42072.1| putative GAF sensor protein [Acidovorax sp. JS42] Length = 824 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 122/358 (34%), Gaps = 26/358 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T+ + + ++ +I +++ LYF + P+ A ++ F P+ + K+ Sbjct: 41 MDATVPSLRFMIGLVIAALVVAGLYFGRTLLVPLALAFLLSFVLEPLVAQL--KRMGLPR 98 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +VIA V M + + E+ + + + R PG + Sbjct: 99 LPSVIAVVMAMLMVLGVGALFVGNEARELSAQLPSYQNTIRKKLRSLRQQLRAPGMFDGA 158 Query: 121 EL---------------WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + P K+ + + + + ++ G + Sbjct: 159 KRTFDIVQREVEAAAPALSGVARAPTVQKVQVQPPVLSPANQLMAALSAVSGPLT----- 213 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 +++ + F D + +L L + ++ R + ++ + Sbjct: 214 QAGLVLVFVIFILLDRVDLRDRLLRLWGGNLHRATDAMDEAGDRITRYLTMQ-LLVNVTY 272 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+ + + WL GVP V G + A+M +P P A + L + L+ G Sbjct: 273 GIPMAAGLWLIGVPGAVLWGSLAAVMRFVPYLGPFIAAAFPLTLAFAVDPGWDLVLWTLG 332 Query: 286 AIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 I L + + + P+L G L L G +GL + P+ + L+ + Sbjct: 333 LIVLLELVSNNVIEPWLYGSSTGLSALSLIVAATFWAALWGPVGLIMSTPLTVCLLVI 390 >gi|322392082|ref|ZP_08065544.1| membrane protein [Streptococcus peroris ATCC 700780] gi|321144982|gb|EFX40381.1| membrane protein [Streptococcus peroris ATCC 700780] Length = 387 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + FL PV+ + ++ + P+ F+ K + + I V + L I Sbjct: 42 ISFLFIPVIDFLSVVMLPVILSGLLFYLLNPLVD-FMEKHKINRVLAISIIFVIIAILLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V L ++ V + V L + L+ + Sbjct: 101 VGLAVAIPNLQRQVVIFAQNVPSYLEDADKVIDDLVTKRLPDDFRPQLEQVLAQFSTQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ S +++I M LF+ RDG + + + Sbjct: 161 AWASNISSKAVNWVSALIS----GTSQVIVALIIMPFMLFYLLRDGKGLRNYITQFLPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ V + + + G +A+ ++ + + G+ V LG+ + ++P Sbjct: 217 LREPVGKVLSEVNQQLANYVRGQITVAVIVAIMFIIFFKIIGLRYGVVLGITAGFLNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMIPALVLGLIAGPIMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ E Sbjct: 337 LLTSGSMFGIWGVLLGIPIYASAKVVISAIFDWYTE 372 >gi|227512952|ref|ZP_03943001.1| permease [Lactobacillus buchneri ATCC 11577] gi|227523079|ref|ZP_03953128.1| permease [Lactobacillus hilgardii ATCC 8290] gi|227083811|gb|EEI19123.1| permease [Lactobacillus buchneri ATCC 11577] gi|227089760|gb|EEI25072.1| permease [Lactobacillus hilgardii ATCC 8290] Length = 359 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 114/330 (34%), Gaps = 5/330 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI F F PVL A I+ + PI + A V L + Sbjct: 20 ISFIFSPIAIFFSTIFIPVLLAGILYYMLNPIVNLLTKIPIGRKKVSRTWAVTLVFLLLL 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + + ++ + + + + I + L + S+ K + Q L Sbjct: 80 GIIILMATVFIPKVLNQLMNLANSVPNAINDGQSLLEKALKEMNSQQLLKKIDFTQ-LTQ 138 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSLG 192 T + F S G + ++I + + LF+ +DG+ ++ + S Sbjct: 139 KFSTNITDYANSFFNGLTSGIGGVISAAANAVIIAVTVPVVLFYMLKDGYRLAPNIKSFL 198 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + I G I + G Y + G+P+ + LGVI I Sbjct: 199 PEKHREQTMDLISAMNRTISKYISGQMIECLFVGTFTAIGYLIIGLPNALLLGVIAGICN 258 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP G I I G + I I + P ++G +++ L Sbjct: 259 IIPYLGPYIGIAPALIVSFSHGGWLGMVYNIVIVIIVQQIDGNLVYPNVIGKSLQIHPLT 318 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ GL+G+ + L A++ VI Sbjct: 319 IIIILLAAGNIAGLMGMILAVPLYAIVKVI 348 >gi|18310895|ref|NP_562829.1| hypothetical protein CPE1913 [Clostridium perfringens str. 13] gi|110800685|ref|YP_696593.1| hypothetical protein CPF_2169 [Clostridium perfringens ATCC 13124] gi|168204903|ref|ZP_02630908.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|168208614|ref|ZP_02634239.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|168214166|ref|ZP_02639791.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|168215539|ref|ZP_02641164.1| putative membrane protein [Clostridium perfringens NCTC 8239] gi|18145577|dbj|BAB81619.1| hypothetical protein [Clostridium perfringens str. 13] gi|110675332|gb|ABG84319.1| putative membrane protein [Clostridium perfringens ATCC 13124] gi|170663583|gb|EDT16266.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|170712978|gb|EDT25160.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170714339|gb|EDT26521.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|182382197|gb|EDT79676.1| putative membrane protein [Clostridium perfringens NCTC 8239] Length = 368 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 121/341 (35%), Gaps = 16/341 (4%) Query: 27 LKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F + P A I + P+ K + F +I+ + V+ + + + Sbjct: 36 IRPFLSVLTPFFWAFGIAYLINPLMMLIEKKFKLKRAFSLMISYILVIICVYILIAIIVP 95 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + EL S + +++ W+++ M L HL+ + I + L + Sbjct: 96 TIFDSLSELFSNL---SEYASSAESWINNTLASMNV-PLDLNHLNTSATEFISKTSTLLS 151 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK- 202 N + + + + + I I + D ++ + + + P+ Sbjct: 152 NIVGSLLTQTIKITSSVVKFVFGFIISI----YMLMDKETLIEGCKKIIIAVMPSEKSSE 207 Query: 203 ----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +G I ++ G++ L G V + I + MIP Sbjct: 208 LFISFMAEAHNIFSRFIIGKIIDSLIIGVLCYIGLLLMGTQYAVLISFIVGLTNMIPYFG 267 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + L + A + L+ I L P ++G + + L F + Sbjct: 268 PFIGMIPAFLLTLIVQPSMAIWVLLFIFILQQFDGWYLGPKILGDQVGVSPLFIIFAVTV 327 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+LG+F+ ++ALI + ++ I ENK++ S Sbjct: 328 GGGIFGVLGMFLSVPIIALIKIYTEKFIEYRLENKKQNFSE 368 >gi|30022466|ref|NP_834097.1| hypothetical protein BC4385 [Bacillus cereus ATCC 14579] gi|206969567|ref|ZP_03230521.1| putative membrane protein [Bacillus cereus AH1134] gi|218236103|ref|YP_002369200.1| hypothetical protein BCB4264_A4510 [Bacillus cereus B4264] gi|296504881|ref|YP_003666581.1| hypothetical protein BMB171_C4052 [Bacillus thuringiensis BMB171] gi|29898024|gb|AAP11298.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206735255|gb|EDZ52423.1| putative membrane protein [Bacillus cereus AH1134] gi|218164060|gb|ACK64052.1| putative membrane protein [Bacillus cereus B4264] gi|296325933|gb|ADH08861.1| hypothetical protein BMB171_C4052 [Bacillus thuringiensis BMB171] Length = 355 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ + Y Sbjct: 36 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGY 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 88 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQLFVGVE 144 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + Sbjct: 145 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQML 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 205 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 265 IPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 324 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 325 GIVGLLISVPILAVIRTV 342 >gi|307701351|ref|ZP_07638372.1| putative membrane protein [Mobiluncus mulieris FB024-16] gi|307613512|gb|EFN92760.1| putative membrane protein [Mobiluncus mulieris FB024-16] Length = 504 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 115/329 (34%), Gaps = 17/329 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F ++ L+ + F P AL + T P+ IS+K A+ A ++++ +F V Sbjct: 111 FAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLISRKVP----AALAALLNIVLMFAV- 165 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ML + +++ + A +P + I L K Sbjct: 166 --------MLGVTGMIAGALTAVTTELPRYQRKFQILYQDSI-HLLEKLGDRFNIDMSSV 216 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + +A ++ + + F D + ++ L + Sbjct: 217 TSPAQRVDLGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELATYAPG 276 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 R + R FL T G ++ ++ VPS + G++ + IP Sbjct: 277 LAIS--LRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILAFVANYIPAV 334 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G IS + +L+ + A + + + +V ++P G + L +F L Sbjct: 335 GFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGLNPTISFLSL 394 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + +G LG + + I I+ +S Sbjct: 395 MVWSAVLGPLGAVVSVPMTLFIKAIFVDS 423 >gi|52549442|gb|AAU83291.1| Htr-like protein [uncultured archaeon GZfos27E6] Length = 367 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 63/367 (17%), Positives = 132/367 (35%), Gaps = 43/367 (11%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + I + Y L F ++ + I + + P+YS F + + + A I+ Sbjct: 8 RNKLYWQILGLISIALLAYMLFPFLDVLIYGIFIYYVARPMYSKFDRRVK-HKSVGAFIS 66 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V+ ++ +F +E+ +S+V + +EL+ Sbjct: 67 LFFVVLPIVLISIFTLSIAYIELSTFLSQVDFG---------------HMGYVNELFKNF 111 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFA-----SRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++K + L + G ++ S F+D + F+ D Sbjct: 112 EGIAANIKQGDISTLISQGDTWVLILTQITKFSDIFFKFIDVLFRLFLTFAIAFYLLTDA 171 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG---- 237 + + + P KK V I + + G + A+ L+ +WL Sbjct: 172 TKLREWITDTFLGGKPELTKKFFDEVDSDIHTVYFGNILTAVLTALIAAVIFWLLNLVAP 231 Query: 238 ----VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--- 289 +P + + ++ + IP G + + ++IYL+I+ N W I L Sbjct: 232 PQLLIPYPILMAILCGLGIFIPLVGMKLVWVPLAIYLVIQ-AYLNGILFTDWWFILLFLV 290 Query: 290 -------FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 F D LRP++ G + F + G+ G +GLF+GP+++ + Sbjct: 291 VVFVVVDFAPDIALRPYISGK--HVHAGTMLFAYIFGIAVFGFVGLFLGPMILIIATNFM 348 Query: 343 KESIMAI 349 K + + Sbjct: 349 KIVLPEL 355 >gi|187734634|ref|YP_001876746.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] gi|187424686|gb|ACD03965.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] Length = 436 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 131/364 (35%), Gaps = 30/364 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++F ++ L FL+ P+L A ++ + PI S + K + + ++ Sbjct: 41 IAAFVIFEVVELLGFLEPVLLPILIAAVVAYLLEPIVSWLVRLKFSRPWAVVTVMFAALA 100 Query: 72 CLFIV------PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L PL+ + EL K I +P ++S ++++ L Sbjct: 101 VLVGFGATILPPLIRQTDELIDNRMELWDKTSELIDSTIEIP-FISRTIDSVYSTSLREL 159 Query: 126 HLSHPQSLKILSETFLKTNGIDFIP-----------------RFASRFGMIFLDYCLSII 168 + SH ++ +T R + +SI+ Sbjct: 160 NASHYTEAEVHDLRNARTAREKLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSIL 219 Query: 169 FMIIALFFFYRDGFSISQQ---LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I F+F + I ++ + L F + + S F G +++I E Sbjct: 220 ITPIFAFYFLLEADKIKEKWPSILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIE 279 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G+++ L G+P + +G ++ ++P G +F + F + Sbjct: 280 GILIAICLKLIGLPYAITIGAAVCVLGIVPYLGIITAFIPAVLLAWFTWGDFQHVLIVSG 339 Query: 285 GAIELFIVDK-TLRPFLVGGPIKLPFLPTFFGLVG-GVRTMGLLGLFIGPVLMALIAVIW 342 + + D ++P +VG ++L L F ++ + GL+G + L A I V++ Sbjct: 340 IFLAVNQFDGWIIQPKIVGDSVELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLY 399 Query: 343 KESI 346 K I Sbjct: 400 KRYI 403 >gi|163941007|ref|YP_001645891.1| hypothetical protein BcerKBAB4_3083 [Bacillus weihenstephanensis KBAB4] gi|229060952|ref|ZP_04198306.1| hypothetical protein bcere0026_30460 [Bacillus cereus AH603] gi|229134204|ref|ZP_04263020.1| hypothetical protein bcere0014_31170 [Bacillus cereus BDRD-ST196] gi|163863204|gb|ABY44263.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] gi|228649224|gb|EEL05243.1| hypothetical protein bcere0014_31170 [Bacillus cereus BDRD-ST196] gi|228718321|gb|EEL69955.1| hypothetical protein bcere0026_30460 [Bacillus cereus AH603] Length = 373 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 120/326 (36%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + +K S + V+ LF+ Sbjct: 41 ISFVFTPFVVFLKTIFFPVLLAGVLFYILHP-FVSLLERKGVSRIVSIASIYIIVLGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ L+ + + G + L+ + + Sbjct: 100 FLAVTVIPIIKDQVNALIDNLPYFGHE----IERAARKFGESNVIGRMQESLNIDFANIV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDSTMNFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RQPAAKRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + I K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPSMVLKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|269977634|ref|ZP_06184601.1| putative domain of unknown function [Mobiluncus mulieris 28-1] gi|269934237|gb|EEZ90804.1| putative domain of unknown function [Mobiluncus mulieris 28-1] Length = 504 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 117/329 (35%), Gaps = 17/329 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F ++ L+ + F P AL + T P+ IS+K A+ A ++++ +F V Sbjct: 111 FAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLISRKVP----AALAALLNIVLMFAV- 165 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ML + +++ + A +P + I L + ++ Sbjct: 166 --------MLGVTGMIAGALTAVTTELPRYQRKFQILYQDSIHLLERLGDRFNIDMSSVT 217 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + +A ++ + + F D + ++ L + Sbjct: 218 SPAQRVD-LGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELATYAPG 276 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 R + R FL T G ++ ++ VPS + G++ + IP Sbjct: 277 LAIS--LRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILAFVANYIPAV 334 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G IS + +L+ + A + + + +V ++P G + L +F L Sbjct: 335 GFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGLNPTISFLSL 394 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + +G LG + + I I+ +S Sbjct: 395 MVWSAVLGPLGAVVSVPMTLFIKAIFVDS 423 >gi|228475955|ref|ZP_04060663.1| putative membrane protein [Staphylococcus hominis SK119] gi|228269778|gb|EEK11258.1| putative membrane protein [Staphylococcus hominis SK119] Length = 409 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 110/293 (37%), Gaps = 5/293 (1%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +++ +F+V + L + + ++ + + + + + Sbjct: 95 LLAIAIVFLVIIGGATLIIDLLIPVIGDQIKQLANNFPKYIEKFNRAIDKVTHMSILSSF 154 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI----IALFFFYRDGF 182 + Q + + + D+ F ++ F + +++ +I LFF +DG Sbjct: 155 YNQIQDWLDSTSKKIPSLTSDYFSGFGTKI-RTFAEAVVNVGVVIATTPFVLFFMLKDGT 213 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + F + + + + S G I++ G++L Y + G+ + Sbjct: 214 KFRDYTTKIVPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGL 273 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L I A+ +++P P + +I + I + F L + + FI + P ++G Sbjct: 274 VLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFISPNIMG 333 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ L F L+ +G++G+ +G A++ V+ + K K Sbjct: 334 KTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRRYNK 386 >gi|229012562|ref|ZP_04169736.1| hypothetical protein bmyco0001_30050 [Bacillus mycoides DSM 2048] gi|229168102|ref|ZP_04295830.1| hypothetical protein bcere0007_30610 [Bacillus cereus AH621] gi|228615346|gb|EEK72443.1| hypothetical protein bcere0007_30610 [Bacillus cereus AH621] gi|228748722|gb|EEL98573.1| hypothetical protein bmyco0001_30050 [Bacillus mycoides DSM 2048] Length = 376 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 120/326 (36%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + +K S + V+ LF+ Sbjct: 44 ISFVFTPFVVFLKTIFFPVLLAGVLFYILHP-FVSLLERKGVSRIVSIASIYIIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ L+ + + G + L+ + + Sbjct: 103 FLAVTVIPIIKDQVNALIDNLPYFGHE----IERAARKFGESNVIGRMQESLNVDFANIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDSTMNFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAKRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + I K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPSMVLKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|119505643|ref|ZP_01627714.1| permease, putative [marine gamma proteobacterium HTCC2080] gi|119458586|gb|EAW39690.1| permease, putative [marine gamma proteobacterium HTCC2080] Length = 356 Score = 89.1 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 121/344 (35%), Gaps = 14/344 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ I V ++ L AP + I + PI + ++ ++ +A++ V V Sbjct: 16 IIVAITVFIWALHPILAPFIVGAFIAYLGDPIVDALEARGYGRTSGVALVFLVLV----- 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + L+ ++ A + + RW+S + ++ P Sbjct: 71 ---LVTTLILLVGIPLLIDQLDQAIKKLPSLYRWVSTSLLPSIHERISVSPVALPPIDWE 127 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSLG 192 + + + ++ M + F+ RD + + L Sbjct: 128 AELAARWQSVGKLVATSVASLTRSGFGVIAAVFNMTLIPVVAFYLMRDWDRMMAAILDLV 187 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + ++ V+ + G ++ + + + + W G+ + LG + + + Sbjct: 188 PITWQQDLSRMVAEANDVLGAFIRGQFLVMLAQAFLYSAGLWFVGLDFALILGTVAGLAS 247 Query: 253 MIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP + V + G++ + L A+ + L P L+G I L Sbjct: 248 IIPYAGAVLGVGSSLVVAWFQTGGDLSFIAWVGLVFAVGQTLESMFLTPVLIGDRIGLHP 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F L+ G + G G+ + + A+I V + ++ + + Sbjct: 308 VVVIFALLAGGQLAGFTGVLLALPVAAVILVFCRHAVGYYRSTE 351 >gi|308177055|ref|YP_003916461.1| hypothetical protein AARI_12820 [Arthrobacter arilaitensis Re117] gi|307744518|emb|CBT75490.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis Re117] Length = 456 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 108/320 (33%), Gaps = 11/320 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + AL I PI F+ ++ S VS++ +F + + + ++ + Sbjct: 148 IAIALFIALGLDPI-VRFLMRRGLSRPLAVAATMVSLLAIFGGFMALIIPTLVNQITAFI 206 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ P + D W E+ ++ + + + F + + + Sbjct: 207 TRA----------PEIVDDFLKSEWVVEIDRQYAVSERIMTEVDRFFGDSGAVTNVFGGV 256 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 ++ +++ +F + L +++ + + + + Sbjct: 257 LGVSQTVAQSMFGVLIVLVLAIYFLASLPGMMSFSLRLTPRSKRERVAELTVRITRSVGN 316 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G +AI L+ + GVP L ++ A++A IP + + + + Sbjct: 317 YVMGQATVAILNCLLALILMSILGVPFTALLTLLVALLAFIPLVGGVIAGVLVTLVTLSL 376 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + L I + P ++ + LP ++ G G+ G + Sbjct: 377 GWQTALIYAICYFGYLQIEAYFVSPRIMRRAVALPGAVAVISVIAGGSLAGVTGALMAIP 436 Query: 334 LMALIAVIWKESIMAIKENK 353 + A ++ E +A ++ + Sbjct: 437 VAASAMILLHEVFVARQDRR 456 >gi|169343821|ref|ZP_02864820.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169298382|gb|EDS80472.1| putative membrane protein [Clostridium perfringens C str. JGS1495] Length = 368 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 121/341 (35%), Gaps = 16/341 (4%) Query: 27 LKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F + P A I + P+ K + F +I+ + V+ + + + Sbjct: 36 IRPFLSVLTPFFWAFGIAYLINPLMMLIEKKFKLKRAFSLMISYILVIICVYILIAIIVP 95 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + EL S + +++ W+++ M L HL+ + I + L + Sbjct: 96 TIFDSLSELFSNL---SEYASSAESWINNTLASMNV-PLDLNHLNTSATEFISKTSTLLS 151 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK- 202 N + + + + + I I + D ++ + + + P+ Sbjct: 152 NIVGSLLTQTIKITSSVVKFVFGFIISI----YMLMDKETLIEGCKKIIIAVMPSEKSSE 207 Query: 203 ----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +G I ++ G++ L G V + I + MIP Sbjct: 208 LFISFMAEAHNIFSRFIIGKIIDSLIIGVLCYIGLLLMGTQYAVLISFIVGLTNMIPYFG 267 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + L + A + L+ I L P ++G + + L F + Sbjct: 268 PFIGMIPAFLLTLIVQPSMAIWVLLFIFILQQFDGWYLGPKILGDQVGVSPLFIIFAVTV 327 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+LG+F+ ++ALI + ++ I ENK++ S Sbjct: 328 GGGIFGVLGMFLSVPIIALIKIYTEKFIEYRLENKKQNFSE 368 >gi|229916491|ref|YP_002885137.1| sporulation integral membrane protein YtvI [Exiguobacterium sp. AT1b] gi|229467920|gb|ACQ69692.1| sporulation integral membrane protein YtvI [Exiguobacterium sp. AT1b] Length = 377 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 116/341 (34%), Gaps = 12/341 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 F+I L L + P + AL++ + P+ + F K +I+ + V+ + + Sbjct: 19 FFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMPRALGTLISLIIVLSIVVG 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + ++ + + L + ++ + + Sbjct: 79 IITIVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPLVNDAYESYQQLNPGQTTS 138 Query: 137 SETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 E + G+ + L ++ +++A FF +D Sbjct: 139 LEGGITELGVQLAAAIGVLSRGVASVLQNMLAALPLVLLLVVVIVLAWFFITKDWPVYVN 198 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L+ L + ++++ + + + ++ + V + ++ + Sbjct: 199 SLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGIVLIGMLILRVDNPLSFAL 258 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++P G + Y + G+ F A L + I + + P +VG I Sbjct: 259 LAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYIIVI-VQRNLAEPKIVGSHI 317 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L L + G++ G+LG +GPVL L+ ++ + Sbjct: 318 GLNPLIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKV 358 >gi|300913741|ref|ZP_07131058.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X561] gi|300890426|gb|EFK85571.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X561] Length = 362 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 123/350 (35%), Gaps = 7/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 13 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWA 119 + I + ++ + + + E+ L AN + + I Sbjct: 73 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDAILNLVDRI---RTY 129 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +++ + S + + + F ++ + ++A FF + Sbjct: 130 YISLPPNITSLIESNMHSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 189 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 190 DKNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVIIGFD 249 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 LG+ I+ +P G+ ++Y ++I N L + + + +V + + Sbjct: 250 YPFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVV-VVRQMIE 308 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 309 PKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 358 >gi|84494511|ref|ZP_00993630.1| membrane protein [Janibacter sp. HTCC2649] gi|84384004|gb|EAP99884.1| membrane protein [Janibacter sp. HTCC2649] Length = 433 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 99/306 (32%), Gaps = 11/306 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + +I + SL L ++ AL + P+ + + I + Sbjct: 101 GALGALIAIGLWHSLGRLATTITILVVALFLTLALNPMVEWLERR-GLKRSLSVGIVFIG 159 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +F L +F + + EL+ + P +L I WA EL + Sbjct: 160 VLVVFTFLGLLVFPPVVTQGGELIQQA----------PSYLDRILNAKWAQELDKNYDIV 209 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + ++ I I G L+ ++I +F + + Sbjct: 210 EKVREEFNKRITDETFISSILGGVLGAGRAVLNGVFQTFTILILTLYFLASLPKMKKTAY 269 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ + ++S + + S +G IA ++ L G+P L V+ Sbjct: 270 SMVPASRRNRFAQLSEEIMRRTGSYAIGQVAIASINAILSYVMMLLLGIPYAAVLAVLVG 329 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + + A ++ I + + + P ++ + +P Sbjct: 330 FLGLIPMVGATLGAGLVCLVAFFDEPRIALFAAIYYLIYQQVENYVIAPKIMQRTVSVPG 389 Query: 310 LPTFFG 315 T Sbjct: 390 ALTVVA 395 >gi|227494765|ref|ZP_03925081.1| integral membrane protein [Actinomyces coleocanis DSM 15436] gi|226831765|gb|EEH64148.1| integral membrane protein [Actinomyces coleocanis DSM 15436] Length = 411 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 9/323 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+I + ++ F P+L AL+ P K + A ++ + + + + Sbjct: 2 IFLIGYLVSYVYIFVVPILLALLFAVLLDPFNRMLKRKLKFPPALAAGVSLIFGLGIVVG 61 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + K+L + A Q + W+ P G+ +S + T ++ L Sbjct: 62 LISAASTQIAFQFKDLAGR---AQQGADKLIAWIRTEPFGIDSSYIDTHLEDLVDAITGL 118 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + T + + ++ G I LS+ + L ++G +I + Sbjct: 119 VKGNSSTLATGVL-QVSTSIGTILTGAILSLFVLFFFL----KEGRTIWLWFVRILPEGA 173 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + + +A + L +G + GVP + LGV+ + + IP Sbjct: 174 REPLHESAIRGWLTLGGYVRAQITVAAIDALGIGLGAYFLGVPLAIPLGVLVFVGSFIPI 233 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA I+ + + L+ A + + I L+P+L+ + L L Sbjct: 234 IGAMITGSIAVLVALVDQGPQTAVIMIVVILAVQQIEGNLLQPWLMSSAVSLHPLAVLLS 293 Query: 316 LVGGVRTMGLLGLFIGPVLMALI 338 + G G+ G + A I Sbjct: 294 VACGSFLFGISGALFAVPIAAFI 316 >gi|163840200|ref|YP_001624605.1| hypothetical protein RSal33209_1455 [Renibacterium salmoninarum ATCC 33209] gi|162953676|gb|ABY23191.1| membrane protein, putative [Renibacterium salmoninarum ATCC 33209] Length = 418 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 118/338 (34%), Gaps = 15/338 (4%) Query: 20 ILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I + LYF+ +L+AL I P+ +K + V+A V + C Sbjct: 92 IAIGLYFVAVNITQLLVWMLTALFIALGLDPVVRWLEKRKIPRPAGI-VLALVVLFCAIA 150 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + + +LV + P + D + + ++ + + Sbjct: 151 GFFSTLIPTIVEQTTQLVQQA----------PTLIKDFLNWDFFVSIDSQFHVRDRISEE 200 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +++ F + + + G + + +++ +F S+ + L Sbjct: 201 VTKFFADSQAVGGVFGGVVGVGSTIANGLFGTLIVLVLSLYFLASLPSMKRWAYRLAPRS 260 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +S + + + + +G +AI + + GVP + L + A++A +P Sbjct: 261 RRLRVEALSEQITRSVGNYVIGQACVAILNAVFAFVVMSIVGVPYSILLAFVVALLAFVP 320 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + + L + P ++ + +P Sbjct: 321 LVGGLIAGVLVSLVALTNSWQTMVIYAVLYFAYLQFEAYFVSPRIMQRAVAVPGAVAVIS 380 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G +G+LG I A I ++ KE +A ++ + Sbjct: 381 VIAGGSLLGVLGALIAIPTAAAIMLLIKEIFLARQDRQ 418 >gi|308063643|gb|ADO05530.1| membrane protein [Helicobacter pylori Sat464] Length = 348 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 138/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL I +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G+ G LG Sbjct: 168 RYFLGVLP-LGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWP-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|49475709|ref|YP_033750.1| permease protein [Bartonella henselae str. Houston-1] gi|49238516|emb|CAF27748.1| permease protein [Bartonella henselae str. Houston-1] Length = 403 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 104/331 (31%), Gaps = 13/331 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + ++ + P ++ +++ + PI + K F ++ Sbjct: 45 MKKQIFFWLGALIFFILFMLVFGSILLPFVAGIVLAYFLNPIVQ-LLEKFRIRRVFGTIL 103 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +F+ L+ L ++++ + N + + Sbjct: 104 ITLFIVVVFVAALIILIPIISWQIQQFM------NDGLPVYINRIQTFFVEHDFDWVRRY 157 Query: 126 HLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S P L+ + L + I + + G ++ + + F+ D Sbjct: 158 FGSDPNELQSNIKGLLGQSSDFITSLLNSLLKSGKSLVNIVSLFVVAPVVAFYMLLDWPR 217 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +DSL + I + + I G + G + + + Sbjct: 218 MVTAVDSLIPRDHLETVRSIFHEMDRAIAGFVRGQGTACLILGGYYAIGLTITELNFGLL 277 Query: 244 LGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G+ +++ +P + V+ N + + I FI L+P Sbjct: 278 IGMFIGLISFVPYIGTMSGFLLSVGVAWVQFYPNNWGWIIVVMVIFLIGQFIEGYILQPK 337 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 LVG + L + F L G G+ I Sbjct: 338 LVGSSVGLHPVWLMFALFAFSSLFGFTGMLI 368 >gi|188527586|ref|YP_001910273.1| membrane protein [Helicobacter pylori Shi470] gi|188143826|gb|ACD48243.1| membrane protein [Helicobacter pylori Shi470] Length = 348 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 138/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IASSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL I +E + Sbjct: 59 CVLVLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G+ G LG Sbjct: 168 RYFLGVLP-LGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|69245951|ref|ZP_00603723.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880352|ref|ZP_05660005.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257891011|ref|ZP_05670664.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257894264|ref|ZP_05673917.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614696|ref|ZP_05712466.1| membrane protein [Enterococcus faecium DO] gi|260562344|ref|ZP_05832858.1| conserved hypothetical protein [Enterococcus faecium C68] gi|293563178|ref|ZP_06677636.1| transport protein [Enterococcus faecium E1162] gi|314939360|ref|ZP_07846601.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314941563|ref|ZP_07848448.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314949610|ref|ZP_07852934.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314953717|ref|ZP_07856592.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992173|ref|ZP_07857617.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314997664|ref|ZP_07862594.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195481|gb|EAN09925.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814580|gb|EEV43338.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257827371|gb|EEV53997.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257830643|gb|EEV57250.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073268|gb|EEW61609.1| conserved hypothetical protein [Enterococcus faecium C68] gi|291604869|gb|EFF34345.1| transport protein [Enterococcus faecium E1162] gi|313588299|gb|EFR67144.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313593276|gb|EFR72121.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594301|gb|EFR73146.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313599622|gb|EFR78465.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641345|gb|EFS05925.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313644034|gb|EFS08614.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 379 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 15/320 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L A I + PI + + F+V ++ + Sbjct: 40 MLSAIFLPLLVAGFIYYMFDPIVVFLEKHRIPR--------VFGFLLTFLVVIILVVLTV 91 Query: 86 MLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +L+ + + Q WL+++ E +L + LS + L Sbjct: 92 MNVVPQLMEQTIQLTQSLPMYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNL 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S+ + + + + + L F ++DG L + Sbjct: 149 FNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELR 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + + A+ G++ A + P + L VI I +IP P Sbjct: 209 QTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVGPFI 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I + + + F A + L + + ++P L G + + L L+G Sbjct: 269 GAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGS 328 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ I + A+I I Sbjct: 329 VAGILGMLICIPVYAVIKTI 348 >gi|308184350|ref|YP_003928483.1| hypothetical protein HPSJM_02870 [Helicobacter pylori SJM180] gi|308060270|gb|ADO02166.1| hypothetical protein HPSJM_02870 [Helicobacter pylori SJM180] Length = 348 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 139/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + LY + F L A ++ + + + S+ + + Sbjct: 1 MKAQYFFWILFLIGFYWILYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y G + E+ + + +WL +E + Sbjct: 59 CVLFLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 286 IKKRIFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|320335654|ref|YP_004172365.1| hypothetical protein Deima_3071 [Deinococcus maricopensis DSM 21211] gi|319756943|gb|ADV68700.1| protein of unknown function UPF0118 [Deinococcus maricopensis DSM 21211] Length = 367 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 118/350 (33%), Gaps = 13/350 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +P ++ + S F L L I+ + + P+ ++ + Sbjct: 20 RSPWVRALVFLLMLYAASRVFGSLAHVIVLGLIGYIVAYLTNPLLIWLQRRRLPRAMG-- 77 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VI + V+ F+ L + ++ +L+ K+ ++ L+ Sbjct: 78 VIIVILVLLGFLALCSTLLVTVIGQLSDLIQKLPELARNTTTFIDRLA------QQHAFL 131 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI---IFMIIALFFFYRD 180 ++ + + + + ++ ++ S + ++ + ++I + D Sbjct: 132 VPLREQIENFTGGGLSQISSVVVPYLQKYQSSLLTGAFSFANTLAEGLAVLIIAIYMMLD 191 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L + + +SR V + G +IA G+++ + GVPS Sbjct: 192 FDKIGLTLLRAFPRSWQPFVLNLSRDVEHAVGGYLRGQILIASCVGIIVAVGLAICGVPS 251 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ALG + ++P I ++ L + + I L P + Sbjct: 252 APALGFLAGAFNIVPYLGVIIAITPALLLAAAAGWLKVVLVIVVFVFANQIEAHLLSPMI 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +G L + ++ GV G++G + L AL ++ +E K Sbjct: 312 LGKSTNLHPVTVILAILAGVTLYGIVGALVAVPLAALGKLLIEEYYYPSK 361 >gi|317127498|ref|YP_004093780.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315472446|gb|ADU29049.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 379 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 133/350 (38%), Gaps = 24/350 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I R++++ IL+S+ +L G+ P A + + P+ F K + + + A Sbjct: 9 IARFVLVIFILISVVWLLGWLFTISYPFWIAAGLVWMFIPLIRLFRRKLKLPNGLAVLTA 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I + + ++ ++ + + V + + + +W + Sbjct: 69 LLIGLGTLIAFFTGIIFLIIIGVRRISTYVPEWIEVSSKQIQ----LFFNQSILPIWHRI 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMI--------------FLDYCLSIIFMII 172 SL + + L+ + A+ FG + + + +F+ + Sbjct: 125 TGFTDSLTVEQQETLQGGITQLGSQVAAMFGEMGQGLADALGVLLVTVPSFLIGFLFVFL 184 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 A +F +D +++ ++ + F + +I + I+ +++ Sbjct: 185 AFYFIGKDWDTLTTRVKNTVPPSFIKKGTEFRKIFRHRVLGFLRAQLILMGIASIIVFIG 244 Query: 233 YWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + V + + I ++P G+ IYL + GN+ + + + + Sbjct: 245 LTILRVDYAFNIALFVGIAEILPYLGSGTILIPWLIYLFLSGNVKLGIGIAVVYGVTIA- 303 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 V +T+ P ++ + L L L G + G+LGLFIGP ++ ++ ++ Sbjct: 304 VRQTIEPKILSSSMNLNALAVLLSLFIGFQIFGILGLFIGPFILVILVIL 353 >gi|170016980|ref|YP_001727899.1| permease [Leuconostoc citreum KM20] gi|169803837|gb|ACA82455.1| Predicted permease [Leuconostoc citreum KM20] Length = 385 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 111/331 (33%), Gaps = 7/331 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P+ + I + ++ + L + ++ Sbjct: 55 APILIAGVLYYLLSPLINLMSRYTRMPRRLSIAIILILLLAIIAGILAVVVIVLRDQIIA 114 Query: 92 LVS-KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ + L + + QS+ S +L T+G+ I Sbjct: 115 FINNWPDYWRTSQNFINETFKSAQFRPVREFLNNTNTNINQSMIDWSRKYL-TSGVAGIG 173 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 FAS + + + L++ DG S + ++ + K Sbjct: 174 TFASTLTSVGVTAVST----PFILYYMLLDGHKFSAFISEKFPRKAQRSIGQLLTDISKQ 229 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G +A ++ G Y + G+P + L ++ I MIP G+ ++ V Sbjct: 230 IAQYIRGQLGVAFAVMVMFGIGYTVIGLPYGILLALMAGIFNMIPYVGSILAQVPVFAVA 289 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI G + AIE I + P ++G + + + L+ G+LG+ Sbjct: 290 LIAGGPKLLILAIIVLAIEQPIEGHVIAPKILGEALSIHPVTVIVVLLSSGHIFGVLGVV 349 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + A+I VI + N E Sbjct: 350 LAVPAYAVIKVIVTRIYTWWRSNSEFFKEEL 380 >gi|148263830|ref|YP_001230536.1| hypothetical protein Gura_1773 [Geobacter uraniireducens Rf4] gi|146397330|gb|ABQ25963.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 357 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 125/353 (35%), Gaps = 8/353 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N + ++ ++ + L F F PV ALI+ + P+ + + + Sbjct: 1 MNNKEKFLAVLAGLLCIGAIILVYFSVTIFLPVFIALILTYILNPLVVMLVKRGMNRTVA 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + V+ + LF+ ++ A + +P + ++ Sbjct: 61 IIAVFCFLVLLAMLTGFLFISSLKAEFSTVQINLPEYAGRLYGYIPGEVKTYLDIETPAK 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + L+ +S K + A + F+ L I L++F D Sbjct: 121 AYQHLNAALEELRGISFNLFKETFA--VVTRAFSSTLAFILAVLGYFITPIYLYYFLSDL 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L ++ V +V+ + G + ++ ++ G+ Sbjct: 179 SEMKSGMLDLIPERHRDRLRERVGEVNEVLSAFVCGQLSVCAILAVLYSIGLYVIGIDLA 238 Query: 242 VALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V +G + + +IP I ++++ LL + + W A+ + P Sbjct: 239 VLIGTLAGALFIIPYFGTILGIIFSMTMALLKFHDFLHPLLCLGWFALVQAAEGGIITPK 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +VG + L + T L+ G + G+ G+ + + A++ V ++ + + Sbjct: 299 IVGDKVGLHPIITILALLIGGQLFGIFGMLLAVPVTAVLNVFFRSLLDYYRRT 351 >gi|253681437|ref|ZP_04862234.1| permease [Clostridium botulinum D str. 1873] gi|253561149|gb|EES90601.1| permease [Clostridium botulinum D str. 1873] Length = 368 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 116/337 (34%), Gaps = 3/337 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I+ S + P A I + P+ F K F +I + ++ + + Sbjct: 30 ILAGSFGVILAILTPFFWAFGIAYILNPLMMYFEKKFNFKRNFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + +L + + + ++ + + + + S + Sbjct: 90 TIISPAIINNVDQLANNIPTYVRKTQTWFYETITR--FNLSNNTTLIQFANKSLSNITNA 147 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + ++ A FL I + L +I L S+ + Sbjct: 148 LTTSLNSFLNVALTKAIDITSSFLKMIFGFIISVYILKDKEVFQKNIKDFLYSIFKKKSV 207 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + V + +G +I ++ GL+ + P + + ++ + MIP Sbjct: 208 DSFLIFGCEVNTIFSQYIIGKSIDSLIIGLLCAIGLGILKTPYVLLISLLVGLTNMIPYF 267 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + + A +F++ + L P ++G + + + Sbjct: 268 GPFIGMIPAVLITLFSSPIKALWVFIFILVLQQFDGWVLGPKILGDKVGVSPFWIILAIT 327 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G T G+LG+F+G ++A+I + ++ I+ NK Sbjct: 328 VGGGTFGVLGMFLGVPIIAVIKTLLQKFILKRLNNKN 364 >gi|297157594|gb|ADI07306.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 511 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 107/318 (33%), Gaps = 19/318 (5%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ ++Y L + V + + + + +++ I +S Sbjct: 156 LLVLAGTVYVLMTVISAVELVVLSFTVALLITAMLEPTVTRLRNRGVPRGLATAITFISG 215 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + F+ + M +L +KV + WL + P + ++ + Sbjct: 216 FIIMGLVIWFVVWQVMENADDLSNKVQAGID---DLRDWLLNSPFHVTEKQINQIANNLR 272 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ +E + ++ I+ + + F DG I Sbjct: 273 DAIGANTEELTSAGLEGV---------TVIVEVLTGILLAMFSTLFLLYDGPKIWAWFLK 323 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + G I+A+ + + +G + VP V L V + Sbjct: 324 LVPAPAREGVAGAGPRAWTTLTAYVRGTVIVALIDAIFIGVGIFFLDVPMAVPLAVFIFL 383 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP + A+++ + L+ ++ A + + I L+PF++G +++ Sbjct: 384 FAFIPLVGAVVSGALAVVVALVTQGVWTAAMVLVVVLAVQQIEGHILQPFILGRAVRVHP 443 Query: 310 LPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 444 LAVVLSVAAGSLIGGIGG 461 >gi|296333166|ref|ZP_06875619.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675328|ref|YP_003867000.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149364|gb|EFG90260.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413572|gb|ADM38691.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] Length = 353 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 122/330 (36%), Gaps = 15/330 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +K F P++ ++ I + P+ K T+S++ ++I+ + + Sbjct: 37 LVIKTIFIPLIISIFISYLLLPVTEWLHGKGLPR--------TLSILVIYILFFGGIGWA 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L+ ++ +++ + + + P + + ++ Sbjct: 89 LYKGVPVLIVQLTDLSENIPMFAETYNGL-----LLHVHNHTDDWPDGMHHRVDKLIRQT 143 Query: 145 GIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 F LDY L + +F+ +D + + + L + Sbjct: 144 ETFFAGTVEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ + G++ G +W+ G+P + LG+I+ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCLILGVMAGITFWIFGLPYPLILGLISGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + ++ + + I F+ L PF+VG +K+ + L+ G Sbjct: 264 AIPALLIAMTISVKAILVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ + A++ V+ + E+ Sbjct: 324 AGIVGMILAVPATAVLKVMMIHFLRMRTEH 353 >gi|229019611|ref|ZP_04176424.1| hypothetical protein bcere0030_41130 [Bacillus cereus AH1273] gi|229025850|ref|ZP_04182248.1| hypothetical protein bcere0029_41410 [Bacillus cereus AH1272] gi|228735461|gb|EEL86058.1| hypothetical protein bcere0029_41410 [Bacillus cereus AH1272] gi|228741691|gb|EEL91878.1| hypothetical protein bcere0030_41130 [Bacillus cereus AH1273] Length = 361 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++++ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYVLFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ H + +I K Sbjct: 94 GIYKGTPIVIKQLQEINEQFPQFTKMYDSWMDGVTEQTANFPSFIHEKVKQIFGGVETK- 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 153 --IQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQML 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPVLAIIRTV 348 >gi|89098587|ref|ZP_01171470.1| hypothetical protein B14911_10257 [Bacillus sp. NRRL B-14911] gi|89086832|gb|EAR65950.1| hypothetical protein B14911_10257 [Bacillus sp. NRRL B-14911] Length = 361 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 114/344 (33%), Gaps = 19/344 (5%) Query: 14 WMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +++F++ +F+ F F P+L + ++ + P+ + Sbjct: 18 LVVIFLLGKIDWFIWPFRKLVATIFFPILISGLLYYILRPVIRWLSGYMPK--------- 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + L+ + L+++ Q P + D+ Sbjct: 69 -TASILIVFGTLIGIGTGIFYFGGSLIAE--QITQISDSFPDKMEDLTSETKEMVDENDF 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I+ + + +I + LF+F +D + Sbjct: 126 GFLSYEEIEQKVLSYSQSFINTVGSNLTGIISAITSIATVLIVVPFILFYFSKDDEKLRP 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L +I + K + + +G IIA +G+++ Y + G+ + L + Sbjct: 186 KLLKWIPDEHKIEGNRILLDIDKTLSTYIIGQFIIAFADGVLMYIGYLIIGLDYALVLAL 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++P P+ +I++ + F + + + + P ++G + Sbjct: 246 FATFLTVVPFLGPLLGIIPAIFVGLMQEPFMVIKILIVLVAVQQLEGNLITPQVMGKRLN 305 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L L+ G +G+ + +++ VI ++ + Sbjct: 306 IHPLTVILVLLVAGSLYGFIGILVAIPFYSVVKVIVRDFWKFYR 349 >gi|227510017|ref|ZP_03940066.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190512|gb|EEI70579.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 359 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 110/321 (34%), Gaps = 7/321 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFL 81 F F PVL A I+ + PI + +K S T+ + + ++ + I+ Sbjct: 30 FFSTIFIPVLLAGILYYMLNPIVNLLTKIPIGRKRVSRTWAVTLVFLLLLGIIILLATVF 89 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ L + V A G + + L + + T Sbjct: 90 IPKVLNQLMNLANNVPGAINDGQNLLE--KALKEMNSQQLLKKIDFTQLTQKFSTNITDY 147 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + + + + + LF+ +DG+ ++ + S Sbjct: 148 ANSFFNGLTSGIGGVISAAANAVIIAVTVPVVLFYMLKDGYRLAPNIKSFLPERHREQTM 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + + + I G I + G Y + G+P + LGVI I +IP G I Sbjct: 208 DLLSAMNRTISKYISGQMIECLFVGTFTAIGYLVIGLPYALLLGVIAGICNIIPYLGPYI 267 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 I G + + I I + P ++G +++ L L+ Sbjct: 268 GIAPALIVSFSHGGWLSMVYNIVIVIIVQQIDGNLVYPNVIGKSLQIHPLTIIIILLAAG 327 Query: 321 RTMGLLGLFIGPVLMALIAVI 341 GL+G+ + L A++ VI Sbjct: 328 NIAGLMGMILAVPLYAIVKVI 348 >gi|261418450|ref|YP_003252132.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|319767590|ref|YP_004133091.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] gi|261374907|gb|ACX77650.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|317112456|gb|ADU94948.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] Length = 341 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 113/332 (34%), Gaps = 4/332 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RWMI+ ++ +L + P+L AL P + Sbjct: 1 MKRWMIIALLFAVGLWLVPYSVPLLFALATALLLEPSIRRLQENYKLKRAHAVTAIFSLF 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + L FL + ++ L K+ V L ++S + + + Sbjct: 61 IIILGLSLYFLVVIFVQQVMALSQKLPYVLNEATKVLDRLIQT-WQSYSSSIPQEIIDSL 119 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + E L + + I + + + +IALF D + Q + Sbjct: 120 ERGVNTVEQMLLSFATNLTQSLVHYIAAI-PAFLIHFLVYLIALFLICLDLPQLKQGMRR 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K ++++ + S ++ GV + ++ + Sbjct: 179 YLSERTEQRLGMVVAQLSKAGIGFLKAQFLLSLITFFLALSGLFVLGVDYAALMALVIVV 238 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P G + + GN L + + + +V + + P + + + Sbjct: 239 VDILPILGTGSVLVPWGLISMANGNNTLGIGLIVL-FVVITVVRRIIEPKVFSTNLGISP 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + G + +G +GLF+GPV++ L+ + Sbjct: 298 LAALVSVYLGFQLLGFIGLFVGPVVVILVEAL 329 >gi|254779441|ref|YP_003057546.1| hypothetical protein HELPY_0810 [Helicobacter pylori B38] gi|254001352|emb|CAX29337.1| Conserved hypothetical protein; putative membrane protein [Helicobacter pylori B38] Length = 348 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 138/363 (38%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + S+ + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGLFQVKVFLDKRF--SNVISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGVNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|315648828|ref|ZP_07901923.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] gi|315275796|gb|EFU39148.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] Length = 372 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 120/350 (34%), Gaps = 18/350 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+ +Y L P L A +I + P + + ++ + ++ Sbjct: 19 IFVTAYLIYVLLPLLYPFLLAWVIAYAMNPCVNLLQQSMKLPRWVAVSLSLLLYFGAALL 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + E+ L N H WL+ + + Q+ Sbjct: 79 ILTAAVTRLVKELITLSQ---SFNLHIDAWMDWLTSWTQNDSFQNIVNEIGRFYQNNPNY 135 Query: 137 SETFLK--TNGIDFIPRFASRFGMIFLDYCLS-----------IIFMIIALFFFYRDGFS 183 ET + T I + + L I ++++ FF Sbjct: 136 HETINQNVTRTTQTIGTAVTDLVTGIFNGILQIIYYLPNLGTIFIVVLLSTFFLSNSWER 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ L + + I + K + I+ ++ + GV S A Sbjct: 196 HNRALFRMIPGVIHKPMTYIFSDLKKALFGFAKAQLILISITAFIVMITLYALGVNSAFA 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G++ ++ ++P G I S+Y + ++ L + +I L IV + + P ++ Sbjct: 256 IGLLIGLVDLLPYLGVGIVLIPWSLYAFMSDDLTLGIGLTVLYSIIL-IVRQIMEPKVLA 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L L FG+ G++ G+LGL IGPV + ++ + + N Sbjct: 315 SSVGLDPLAALFGMFVGLKLFGILGLIIGPVSLVIVDAFRRAHVFKDLRN 364 >gi|291544868|emb|CBL17977.1| Predicted permease [Ruminococcus sp. 18P13] Length = 439 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 116/338 (34%), Gaps = 22/338 (6%) Query: 31 FAPVLSALIIGFTSWPIY-------SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 AP+ ++I + S P+ +I++K+E + + VI+ M + I+ ++ + Y Sbjct: 47 IAPITWGIVIAYLSTPLLTFFEKYLKKWINRKKEHNKLIRVISIFLCMSILILSIVGIVY 106 Query: 84 YGMLEMKELVSKVVLA-----NQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLKILS 137 + E+ + + N + + I E T S Q + + Sbjct: 107 AVIPEIISSMKNIFTLLPDYLNNLQQYLTNRFNSFIQDNPELGEKLTNSFSSMQDMLLGL 166 Query: 138 ETFLKTNGIDFI---------PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + A F + D+CL + + L+ I + + Sbjct: 167 ADEYSPKLDSLLDKDGVVANVTSSAYAFLITLKDFCLGLFVSVYLLYSKELFLAQIKKVV 226 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + +I+ F G + ++ G++ + +P + + ++ Sbjct: 227 HALFSKRHCEFIFRIASRTNYTFMHFFSGKAVDSLIIGMLCFIILTIMKMPYVLLISILV 286 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + M+P PI S L++ ++ + L P ++G + L Sbjct: 287 GVTNMLPFFGPIIGAVPSGLLILLSEPDRTLAFVIFIILLQQFDGNILGPKILGNSLGLS 346 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F + G LG+ L A++ +++S+ Sbjct: 347 PFWIMFAIFLGGGMFNFLGMVAFVPLFAVLYAFFRDSV 384 >gi|254563925|ref|YP_003071020.1| hypothetical protein METDI5610 [Methylobacterium extorquens DM4] gi|254271203|emb|CAX27215.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens DM4] Length = 679 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 114/357 (31%), Gaps = 24/357 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ II+ L+F + P+ A+++ F P+ + F+ + + F +++ + Sbjct: 30 ASSLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVN-FLRRLKLGRAFAVLVSVLLA 88 Query: 71 MCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGI------PVPRWLSDI--------- 113 + + +++ + V G+ ++++I Sbjct: 89 AGIIAAVTTVIGVQVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQSGE 148 Query: 114 --PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIF 169 ++ S+ ++ + L A+ + Sbjct: 149 ESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATAGI 208 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + L F + +L L + + FLG + G+V+ Sbjct: 209 VFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGVVI 268 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAI 287 G W+ GVPS V G+ +M +P + I L + + L FL A+ Sbjct: 269 GVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLFAL 328 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IV + + P + G + + G +GL + L + V+ + Sbjct: 329 VEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 385 >gi|239828018|ref|YP_002950642.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] gi|239808311|gb|ACS25376.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] Length = 372 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 129/352 (36%), Gaps = 16/352 (4%) Query: 10 GIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++++ ++V +LY++ P + A I F P+ +K + ++ Sbjct: 8 SFIRFLLVIAVVVFGSMALYYVSTVTYPFIIAFFIAFLINPLVDFLETKTKMPRWLAVIV 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGMWASEL 122 + + + + L + + L + V Q I L IP + L Sbjct: 68 TLIVLFAIVAGLVTLLIAEIVSGTQYLANVVPENFQKLITYMETLVAQQIIPLYNDLAVL 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI-------FLDYCLSIIFMIIALF 175 + + Q I + + T + +F + IF ++A F Sbjct: 128 FKNLDASQQDTIINNIQAVGTQIATTVGQFIQHVLQNIPLLLAWLPNAATVFIFSLLATF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D + ++ + K + + K + + +++ + Sbjct: 188 FISKDWYRLTGIAQKILPAKARKSGKTVFLDLKKALFGFIKAQATLISITTVIVLIGLLI 247 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + + +I I+ ++P G I F IY + G++ A L + I + + + Sbjct: 248 LRVNYAITIALIIGIVDILPYLGTGIVFVPWIIYAAVSGDVPFAIGLGVLY-IVVLVQRQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P ++ I L L T L G + +G LGL IGPV + +I + ++ Sbjct: 307 IMEPKVLSSSIGLDPLATLVALFVGFKLIGFLGLIIGPVTLVIIRTLHSANV 358 >gi|257882205|ref|ZP_05661858.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|293568382|ref|ZP_06679703.1| transport protein [Enterococcus faecium E1071] gi|294623135|ref|ZP_06702021.1| transport protein [Enterococcus faecium U0317] gi|257817863|gb|EEV45191.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|291588903|gb|EFF20730.1| transport protein [Enterococcus faecium E1071] gi|291597504|gb|EFF28669.1| transport protein [Enterococcus faecium U0317] Length = 379 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 15/320 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L A I + PI + + F+V ++ + Sbjct: 40 MLSAVFLPLLVAGFIYYMFDPIVVFLEKHRIPR--------VFGFLLTFLVVIILVVLTV 91 Query: 86 MLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +L+ + + Q WL+++ E +L + LS + L Sbjct: 92 MNVVPQLMEQTIQLTQSLPMYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNL 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S+ + + + + + L F ++DG L + Sbjct: 149 FNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELR 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + + A+ G++ A + P + L VI I +IP P Sbjct: 209 QTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVGPFI 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I + + + F A + L + + ++P L G + + L L+G Sbjct: 269 GAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGS 328 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ I + A+I I Sbjct: 329 VAGILGMLICIPVYAVIKTI 348 >gi|260584950|ref|ZP_05852694.1| membrane protein [Granulicatella elegans ATCC 700633] gi|260157380|gb|EEW92452.1| membrane protein [Granulicatella elegans ATCC 700633] Length = 391 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 126/331 (38%), Gaps = 13/331 (3%) Query: 27 LKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LKGFF+ P++ A I+ + PI + K S + + + ++ L F+ Sbjct: 50 LKGFFSIIGFPMVGAGILFYMVKPIQDFLVEKGVHKSVAILLNFILLIVLLLAAIFSFI- 108 Query: 83 YYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 +++ELV+++ + V R + +L ++ QSL L Sbjct: 109 PIVEKQLRELVTQLPIYYQIISQQVERVVQSNTFSAVQEQLNGINMDFLQSLGTRVNGLL 168 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 ++ + II M I LF+ +DG I + + Sbjct: 169 NVTFSGI-----GNVVGAVGEFMIGIITMPILLFYLLQDGEKILPAVLQVFPTRSRKRMS 223 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + + + I S G +AI ++ Y + G+P V + ++ + +IP G+ Sbjct: 224 IVLTEMNQQISSYIRGQLTVAIAVAIMFSIGYAIIGLPYGVTIAILAGALNVIPYVGSFF 283 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 I + + + +F+ IE + + + P ++G +++ + L+ Sbjct: 284 GILPALIVGFVI-SPWMFVQVFIVFVIEQTLEGRIVSPLILGNSLQMHPVTILVVLLSTG 342 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + GL+GL +G A++ VI KE Sbjct: 343 KIFGLVGLLLGVPGYAVLKVIISHIFDWYKE 373 >gi|315445776|ref|YP_004078655.1| permease [Mycobacterium sp. Spyr1] gi|315264079|gb|ADU00821.1| predicted permease [Mycobacterium sp. Spyr1] Length = 389 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 104/301 (34%), Gaps = 14/301 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ ALI WP +K ++ + + + + + + + + Sbjct: 50 VLPVVLALIACTVLWPPVRWLRNK-GVPPAAAVLVVLLLAVGVLAGVVAAVAPAIVEQSQ 108 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL + + V WL P + ++L S L ++ Sbjct: 109 ELAEQASAGI---VQVRDWLGGPPLNISEAQL--------NSGVAAITDRLNSSSAQIAS 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + G +++ I+ FFF +DG L + ++ V Sbjct: 158 GVFTGVGAAT-SALVTLFAAIVVTFFFLKDGPGFIPWLRRTVGQPAAPHLAEVLDRVWTT 216 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + +++ + +++G + GVP AL +IT I IP GA ++ + Sbjct: 217 LGGFIRTQALVSFVDAVLIGIGLVVLGVPLAYALAIITFIGGFIPIVGAFVAGGLAVLIA 276 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ +A + + L+P+L +KL + + G T G++G F Sbjct: 277 LVSNGPVDALIVLGIIVAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGASTFGVIGAF 336 Query: 330 I 330 + Sbjct: 337 L 337 >gi|208434487|ref|YP_002266153.1| membrane protein [Helicobacter pylori G27] gi|208432416|gb|ACI27287.1| membrane protein [Helicobacter pylori G27] Length = 348 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 136/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|300118343|ref|ZP_07056090.1| permease [Bacillus cereus SJ1] gi|298724312|gb|EFI65007.1| permease [Bacillus cereus SJ1] Length = 373 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 100 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RQPAAMRILDEMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|325292516|ref|YP_004278380.1| permease [Agrobacterium sp. H13-3] gi|325060369|gb|ADY64060.1| putative permease [Agrobacterium sp. H13-3] Length = 379 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 113/327 (34%), Gaps = 9/327 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T L Q ++ + + L P ++ + + + P+ + S Sbjct: 8 TSLRRQVFFWIGVLAVFIFFLMVFSSILLPFVAGMALAYFLDPVADWLERR-GLSRLMAT 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ V+ + +F + L+ + + E ++++ + W S Sbjct: 67 VVILVTFVLIFALSLIIIIPLIAAQASEFITRIPQYISSLQQLIAGADANLLPDWVSNQI 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L F+ T + G +D ++ + F+ D Sbjct: 127 NAVKENFSKLLTEGAGFIGT-----LLTQIWNSGKSLVDVMSLLVVTPVVAFYLLLDWDR 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++DS + ++I+R + + I G + + G+ L G+ + Sbjct: 182 MIDKVDSWIPRDYVHTVRQIARDMDRTIAGFVRGQGSLCLILGVYYAVGLSLVGLNFGLL 241 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE---LFIVDKTLRPFL 300 +G+ + +++ IP + +++ + I + +FL A+ FI L+P L Sbjct: 242 IGLFSGLISFIPYIGSMVGLILAVGVAIVQFWPDYIYVFLTLAVFFSGQFIEGNILQPKL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLG 327 VG + L + F L G +G Sbjct: 302 VGSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|297202022|ref|ZP_06919419.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197714344|gb|EDY58378.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 367 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 123/343 (35%), Gaps = 17/343 (4%) Query: 21 LVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 VSL+ L ++ P++ L++ +WP + F+ ++ A TV + + Sbjct: 28 AVSLWVLGRMWSVVWPLVIGLLLTTLTWPP-TRFLLRRGWKPALAASTVTVLFLLVAAGV 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + +L VV Q + + G + + + + Sbjct: 87 VALIAVPVASQSGDLTDGVVDGVQK-------VREWAAGPPLNIGDAQIDKAFDTAVSRA 139 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + L + + ++ ++ ++ + + +FFF +DG L Sbjct: 140 QDGLGSMVGAVVTGVST-----VVNGLVTAVLALFLMFFFLKDGPRFLPWLARQLPGRLS 194 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 ++ + S + + + +++G W+ GVP + L V+T + A +P Sbjct: 195 TDVPTVAARGWDTLGSFVRSQAAVGLIDAVLIGLGLWILGVPLVLPLAVLTFVSAFVPIL 254 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 GA + + L+ + +A + + + +P + + L + Sbjct: 255 GAFFAGFVAVLIALVSNGLMDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHAAVILLAV 314 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G++G + ALIAVIW ++E + ++ Sbjct: 315 TLGGSLAGIVGSLLAVPAAALIAVIWNYVREQLQEPSQDPGTD 357 >gi|293379019|ref|ZP_06625173.1| putative membrane protein [Enterococcus faecium PC4.1] gi|292642361|gb|EFF60517.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 334 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 112/314 (35%), Gaps = 15/314 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+L A I + PI + + + F+V ++ + M + + Sbjct: 1 MPLLVAGFIYYMFDPIVVFLEKHRIPR--------VLGFLLTFLVVIILVVLAVMNVVPQ 52 Query: 92 LVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 LV + + Q WL+++ E +L + LS + L + Sbjct: 53 LVEQTIQLTQSLPIYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNLFNIILV 109 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + ++ + + + + + L F ++DG L ++ + + Sbjct: 110 SLSASVTKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELRQTVKEL 169 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + + + A+ G++ A + P + L VI I +IP P +I Sbjct: 170 NETLSAYISSTILDALIIGVMSFLAMRIFNQPYSLLLAVICGITNIIPYVGPFIGAVPAI 229 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + F A + L + + ++P L G + + L L+G G+LG Sbjct: 230 IVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILG 289 Query: 328 LFIGPVLMALIAVI 341 + I + A+I I Sbjct: 290 MLICIPVYAVIKTI 303 >gi|225181973|ref|ZP_03735406.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] gi|225167335|gb|EEG76153.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] Length = 354 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 126/326 (38%), Gaps = 13/326 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L FF + I+ + P+ +++ + ++ ++ V Sbjct: 36 AAAFLVLLPFFLAI----ILAYILNPLVEFLENRRIPRH--------LGILLIYAVFFST 83 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 +F G+ + L+ ++ + R + + + + + + + Sbjct: 84 IFLIGISTIPTLLLELQKLGEKIPDYTRHVQSFLLHLQSDYQRINMPENIRLVLDENIVA 143 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L+ N D + R +F +I+ + + +++ RD S+ + L + + Sbjct: 144 LQENLQDVVERVTGTVLSLFAH-TFTILIIPLLVYYILRDMESLKRSFVMLFPSRYRKWV 202 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + + + + F GM +I+ GL+ + GV + LG+I + +IP P+ Sbjct: 203 ASMGSEMDRTLGAYFRGMLLISFLVGLLTYVGLTIIGVDFSLLLGIIAGLTNIIPYFGPL 262 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ + + + A + + I I + + P ++G + L L F L+ G Sbjct: 263 IGAVPAVLIGLLHSPALALQVVVVIVIVQQIESQFITPQILGRSLGLHPLIVIFVLIVGG 322 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESI 346 R GL+GL A++ + +K +I Sbjct: 323 RFFGLVGLIFAVPFAAMVRIFFKHAI 348 >gi|227552578|ref|ZP_03982627.1| permease [Enterococcus faecium TX1330] gi|257888193|ref|ZP_05667846.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896916|ref|ZP_05676569.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|227178327|gb|EEI59299.1| permease [Enterococcus faecium TX1330] gi|257824247|gb|EEV51179.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833481|gb|EEV59902.1| conserved hypothetical protein [Enterococcus faecium Com12] Length = 379 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 114/320 (35%), Gaps = 15/320 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L A I + PI + + + F+V ++ + Sbjct: 40 MLSAIFLPLLVAGFIYYMFDPIVVFLEKHRIPR--------VLGFLLTFLVVIILVVLAV 91 Query: 86 MLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +LV + + Q WL+++ E +L + LS + L Sbjct: 92 MNVVPQLVEQTIQLTQSLPIYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNL 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++ + + + + + L F ++DG L + Sbjct: 149 FNIILVSLSASVTKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELR 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + + A+ G++ A + P + L VI I +IP P Sbjct: 209 QTVKELNETLSAYISSTILDALIIGVMSFLAMRIFNQPYSLLLAVICGITNIIPYVGPFI 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I + + + F A + L + + ++P L G + + L L+G Sbjct: 269 GAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGS 328 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ I + A+I I Sbjct: 329 VAGILGMLICIPVYAVIKTI 348 >gi|294498661|ref|YP_003562361.1| putative membrane protein YueF [Bacillus megaterium QM B1551] gi|294348598|gb|ADE68927.1| putative membrane protein YueF [Bacillus megaterium QM B1551] Length = 363 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 121/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L F+ F P+L A + F PI S KK T ++ V + + Sbjct: 26 ISFVFLPIGVFISTLFFPILVAGFLFFLFEPIVSFLTRKKVP-KTLAILLLYVVFIGVIA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +L + LS+ W E L H + + Sbjct: 85 SIVGGVGPTLSKQLTDLAKNIPSYIVETREYINDLSNSRWFNWLVEQKYVSLDHIEESLL 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L TN + I S I L+++ + LF+ +D + + + Sbjct: 145 NYASTLPTNLTNSISSVLSVVTNIT----LTVVTVPFILFYMLKDSHKLRKNTLRMVPPS 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + + G ++ + G+ Y + G+P + L +I A+ +IP Sbjct: 201 YRKETLRTMKETTNTLATYIQGQMLVCLFVGISTFIGYLIIGLPYALILALIGALTNIIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + + P ++G + L Sbjct: 261 YVGPFIGVAPALIVGLLYSPTKAVLVIIVVVIVQQLDGNIISPLVIGKKLNTHPLTIIIL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G+LG+ + A+ I + I+ + I Sbjct: 321 LLVAGNIAGILGMILAIPAYAVTKTIVINIVRMIQFRNKSIK 362 >gi|254830431|ref|ZP_05235086.1| hypothetical protein Lmon1_03682 [Listeria monocytogenes 10403S] Length = 390 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI K + + + + ++ L I Sbjct: 37 IAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKR-GWAIALLYLVIIGLLI 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L S + ++S Sbjct: 96 LLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSRSSLFDQLKDKLNTNMSDIMKTLS 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T+ I+ + L+I+ + LF+ +DG + L + Sbjct: 156 TK----GTSVINSSISSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A+ +++ I S G I+++ G++L Y + G+P + L +I A +++P Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + I + + L + + + K + P ++G +K+ + F Sbjct: 272 YLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G+LG+ A++ VI + K Sbjct: 332 ILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKR 367 >gi|219847676|ref|YP_002462109.1| hypothetical protein Cagg_0749 [Chloroflexus aggregans DSM 9485] gi|219541935|gb|ACL23673.1| protein of unknown function UPF0118 [Chloroflexus aggregans DSM 9485] Length = 417 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 21/352 (5%) Query: 9 QGIMRWMIMFI-ILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + RW+++ + I + + + P + ++ + P+ + F + Sbjct: 10 RRVARWLLVAVSIYLVGWLISHTGSAITPFVFGGVLAYLFLPLVNFFERWMP--RWLAIL 67 Query: 65 I-------ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + A V+ + I PL+ + + ++ + AN+ + L+ +P + Sbjct: 68 VVYLLTFGALVAAIAFVIPPLIAQIVELIRTLPDIATIQREANRLLDEYEQLLASLPPAI 127 Query: 118 WASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + L L F+ F+ + + + L + LF Sbjct: 128 QSEVQSAIASAASEGLSTLRANFVSYLQGIGQFLITSVLSV-VNTVTFLLGFFLVPFWLF 186 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + D + L+ L A + + I+ + G I+ GL Sbjct: 187 YVLMDQRAGRDYLNRLIHPRLRADFWAMVSIIDYDLSGYLRGQLILGTSVGLAAWIGLTA 246 Query: 236 AG-----VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 VP V L V+ + ++P PI +I L + + A + + Sbjct: 247 LNMAGMKVPYTVLLAVVAGVTEVVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAIQQ 306 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + L P ++G + + LV + GLLG + L A+ ++ Sbjct: 307 LENHILVPRIIGESVGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLF 358 >gi|320451497|ref|YP_004203593.1| permease [Thermus scotoductus SA-01] gi|320151666|gb|ADW23044.1| permease [Thermus scotoductus SA-01] Length = 365 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 120/333 (36%), Gaps = 8/333 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + +L+A I + + P+ F +K+ L V+ + LF+ FL +L Sbjct: 34 WPALSILLTAFAIAYLTHPVVRFFEAKRLPR--LLGVVLVYLGLGLFLGLASFLTAQTVL 91 Query: 88 EMKELVSKVVLA----NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ L ++ + +P + IP + + + Q L L Sbjct: 92 ELSRLAQELPALLDPFLSWLLDLPNRVRTIPIPETLRPVLAEASRNLQGLLQGFLETLVR 151 Query: 144 NGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + G L ++ + +F D ++Q + + Sbjct: 152 WLQGLLSQGGNLLGFFTSLLGGIFQLLTALTLSIYFLYDLPRLAQAALKVFPEPYQPLVA 211 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + + + G ++A GL++G WL GVP +LG + + +IP I Sbjct: 212 ELAHKLDQSVGGYVRGQLLVAFLVGLLVGVGLWLVGVPLAASLGFLAGVFNLIPFVGVIV 271 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L G L + + L PF+VG +L + ++ G Sbjct: 272 SGVPALLLAATGGWGKVLLALLVLWLANQLEGNLLGPFIVGRSTRLHPVTAIAAILVGAT 331 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G +G A + V+ +E + +E Sbjct: 332 LFGLWGALLGVPTAAFLKVLLEEYYKKSRFYRE 364 >gi|289423261|ref|ZP_06425072.1| putative permease [Peptostreptococcus anaerobius 653-L] gi|289156361|gb|EFD05015.1| putative permease [Peptostreptococcus anaerobius 653-L] Length = 424 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 120/378 (31%), Gaps = 29/378 (7%) Query: 2 RETMLNPQGIMRWMIMFIILVS-----LYFLKGFFAPVLSALIIGFTSW----PIYSSFI 52 R + + ++ ++ + I+ + L L +P++ +I F PI + Sbjct: 5 RISTIKTIFLIAFLALVILNFTNILNNLGILLEVLSPIMMGCVIAFVLNTIVTPIEDKLL 64 Query: 53 SKKEES------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 S+ + V+A + L + + + + V + + Sbjct: 65 SRIDNKFINKIKRMVSIVLALLISFSLVFLIMKLIVPEVKNSLATFV----------VQL 114 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P + + + +L + + S Sbjct: 115 PDIYEIVKKEIIKIIPSAQENLSSTNLNVQEIANKGFETVSAWAGGIFSLVNSVFGVLAS 174 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIA 222 ++ I + ++++Q D L + P K + ++ F G I A Sbjct: 175 VVMASILAIYIVSSKETLTRQFDKLFKKFIPERIIKPMYYFFDVSNSTFKAFFTGQFIEA 234 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 I G++ +P +G + A++P +L+ + F A Sbjct: 235 IILGVLCTLGMAALRLPYASMVGSFVGLTALVPMVGAYLGCIFGFLMLLPVSPFKAMVFI 294 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + I + P +VG + LP + ++ G ++G+F G + A+I I Sbjct: 295 IFLLVLQQIEGNVIYPRVVGSSVGLPGMWVLVSVIVGGGLFNMVGIFFGVPVTAVIYKIL 354 Query: 343 KESIMAIKENKEKISSNF 360 K+ + + NF Sbjct: 355 KDQVNSGSTKIADRVENF 372 >gi|218532897|ref|YP_002423713.1| hypothetical protein Mchl_5020 [Methylobacterium chloromethanicum CM4] gi|218525200|gb|ACK85785.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 679 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 114/357 (31%), Gaps = 24/357 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ II+ L+F + P+ A+++ F P+ + F+ + + F +++ + Sbjct: 30 ASSLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVN-FLRRLKLGRAFAVLVSVLLA 88 Query: 71 MCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGI------PVPRWLSDI--------- 113 + + +++ + V G+ ++++I Sbjct: 89 AGIIAAVTTVIGVQVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQSGE 148 Query: 114 --PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIF 169 ++ S+ ++ + L A+ + Sbjct: 149 ESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATAGI 208 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + L F + +L L + + FLG + G+V+ Sbjct: 209 VFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGVVI 268 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAI 287 G W+ GVPS V G+ +M +P + I L + + L FL A+ Sbjct: 269 GVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLFAL 328 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IV + + P + G + + G +GL + L + V+ + Sbjct: 329 VEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 385 >gi|40063569|gb|AAR38358.1| permease, putative [uncultured marine bacterium 582] Length = 361 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 119/339 (35%), Gaps = 14/339 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I+ +L+FL P L + + P+ + S V TVSV+ +FIV Sbjct: 23 AILFGALWFLGDILMPFLLGGAVAYFLDPVADRLE-RLGLSRLLATVCITVSVILVFIVF 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + L + + P + + K L Sbjct: 82 AFLVIPTLVQQAVTLFDTAPRLVRELQEFLT--TQFPSLVDSESTLRKSLLALGDQ---- 135 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++ G + + ++ L ++ + + F+ D + +D + Sbjct: 136 ---VQNKGGQLLKSLLTS-AASLINIALLLVIVPVVTFYLLYDWDRLVATIDDMLPRDHA 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++ + + + S GM + + G A L G+ + +G I ++ IP Sbjct: 192 DVVRGLALEIDQTLASFVRGMGTVCLILGTYYALALMLVGLQFGLVVGFIAGLVTFIPYV 251 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELF---IVDKTLRPFLVGGPIKLPFLPTFF 314 + +++I L + + L L GAI + I L P LVG + L + F Sbjct: 252 GALVGGSLAIGLGLFQFWGDWVSLGLVGAIFVTGQMIEGNYLTPKLVGLSVGLHPVWLLF 311 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G G+ + + A I V+ + +I K ++ Sbjct: 312 ALSVFGSLFGFAGMLVAVPVAAAIGVLTRFAIGRYKRSR 350 >gi|322389894|ref|ZP_08063434.1| membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143330|gb|EFX38768.1| membrane protein [Streptococcus parasanguinis ATCC 903] Length = 391 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 111/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F PV+ + ++ + PI F+ +K F + L I Sbjct: 42 ITFIFIPIFEFAGAVMLPVIISGLLYYLLNPIVD-FLERKGLKRIFAISFVFFLIAVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + D + + Sbjct: 101 WGLAVVIPSVQRQVVSFFHNLPTYLEKANATIDDFLDNRVSSDIKPQLDEITKELSANIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ + +++I M +F+ RDG ++ + Sbjct: 161 SWASSISGRAVNWVSNLIGVASQV----IVALIIMPFIVFYLLRDGKNLKGHIVRFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ V + + G +AI ++ + + G+ V LG+ I+ +IP Sbjct: 217 IRKSAEQVLSDVNTQLSNYVRGQITVAIVVAIMFIIFFKIIGLRYAVTLGISAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + A+E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLVAGPEMFIKVLIVFAVEQTIEGRFVSPLVLGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+G + A V+ K Sbjct: 337 LLTSGSMFGIWGVFLGIPVYASAKVVIGAIFEWYK 371 >gi|229158006|ref|ZP_04286077.1| hypothetical protein bcere0010_41850 [Bacillus cereus ATCC 4342] gi|228625459|gb|EEK82215.1| hypothetical protein bcere0010_41850 [Bacillus cereus ATCC 4342] Length = 361 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + S T++++ ++I+ + Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKIHKEGMPS--------TLAILLIYILFFGGIGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ N+ + G+ T + K+ Sbjct: 94 GIYKGTPVVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFIGVE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D L + + + + Sbjct: 151 TKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQIL 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTSLLVKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVA 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLISVPVLAVIRTV 348 >gi|163853956|ref|YP_001641999.1| hypothetical protein Mext_4560 [Methylobacterium extorquens PA1] gi|163665561|gb|ABY32928.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 668 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 114/357 (31%), Gaps = 24/357 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ II+ L+F + P+ A+++ F P+ + F+ + + F +++ + Sbjct: 19 ASSLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVN-FLRRLKLGRAFAVLVSVLLA 77 Query: 71 MCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGI------PVPRWLSDI--------- 113 + + +++ + V G+ ++++I Sbjct: 78 AGIIAAVTTVIGVQVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQSGE 137 Query: 114 --PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIF 169 ++ S+ ++ + L A+ + Sbjct: 138 ESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATAGI 197 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + L F + +L L + + FLG + G+V+ Sbjct: 198 VFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGVVI 257 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAI 287 G W+ GVPS V G+ +M +P + I L + + L FL A+ Sbjct: 258 GVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLFAL 317 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IV + + P + G + + G +GL + L + V+ + Sbjct: 318 VEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 374 >gi|325569862|ref|ZP_08145856.1| permease [Enterococcus casseliflavus ATCC 12755] gi|325156985|gb|EGC69153.1| permease [Enterococcus casseliflavus ATCC 12755] Length = 394 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 114/334 (34%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + + F ++ + ++ I+ + + Sbjct: 63 FFSTLFAPVLIAGFLYYLLNPIVLFLMKTTKIKRLFAVILVLLLLVAAIILIFVSVIPNL 122 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L + ++ ++D P ++ LS L Sbjct: 123 VSQITSLAENIPTFAKNMESWISRIADDPFFKQID------IAQQLENLNLSYGSLLQQF 176 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + I+ + LF+ +DG + L ++ + Sbjct: 177 LSGLSTSLGSIVSTIASATMIIVTVPFILFYMLKDGEKLVPNLKTVFPERRRDQIVGLLG 236 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I I YW+ GV GVI + +IP P Sbjct: 237 DLNKTLSNYISGQAIECIFVATFTFIGYWMIGVNYAFLFGVIAGVTNLIPYLGPYLGLIP 296 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + F A + + + + P ++G + + L L+ GL Sbjct: 297 AVLVTVFDEPFRALLCCIVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLLVAGNLAGL 356 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I + IK++K K + Sbjct: 357 LGIFLGVPFYAICRTIVVFIVRLIKDDKIKKNQE 390 >gi|298241839|ref|ZP_06965646.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297554893|gb|EFH88757.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 385 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 107/298 (35%), Gaps = 13/298 (4%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++A + + L + L FL Y + + V + + Q + P G Sbjct: 71 LLAILIMYVLVLSVLSFLIYLVVTTTIDQVRALASSVQTLLT--------PKGAGQLSPI 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L +F R A ++ L ++ + + + DG Sbjct: 123 EQTLGSIGISHTQISSFGSQITSRLEGAARDAVPLVSGVVNAILDLVLIAVLSVYLLNDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 IS + H+ A + + +++ G I++ G+++G ++ VP Sbjct: 183 TRISTWVRKNSPHV--ARASTVLDTLQRIVGGYIRGQLIMSTLIGVLVGGGMFIFHVPYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+ ++ IP + A+ + L + A + ++ I + + P +V Sbjct: 241 VFLGVMAFVLEFIPVLGTLVSGAICVLLALTQGWLIALGVLIYFIIVHILEGDVIGPRIV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG-LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G + L + + L+ G G+ G LF PV+ L ++ I E+ Sbjct: 301 GQAVGLHPVISIAALIAGAELFGIWGALFAAPVVGVLQVLVVALWINWRHTRPEQFEQ 358 >gi|255262669|ref|ZP_05342011.1| membrane protein [Thalassiobium sp. R2A62] gi|255105004|gb|EET47678.1| membrane protein [Thalassiobium sp. R2A62] Length = 353 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 129/341 (37%), Gaps = 16/341 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ V +++L P + I + PI + + + T+ +FIV Sbjct: 16 AAVLFVLMWYLGNVILPFVLGGAIAYCLDPIADRLEA-LGLNRIMATSVITLFGALVFIV 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLSHPQSLKI 135 + + + + L+ P W +D + S + Sbjct: 75 LFIAVIPTLIQQASGLIQ----------AAPGWFTDFQAFLTQRFPSLIDENSAVRDQLG 124 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++++G + I S F L+ + I+ + + F+ D +++ ++D L Sbjct: 125 RVSEAIQSHGGELIEGLLSSF-SGLLNIAVLIVIVPVVAFYLLLDWDNMTARVDDLLPRD 183 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +KI R + K + S G + + G+ + + G+ + +G I +++ IP Sbjct: 184 HAPTIRKICRDIDKTLASFIRGQGTVVLILGVYYAISLMIVGLNFGLVVGSIAGLISFIP 243 Query: 256 GGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A++I + I G+ F+ + + A+ F+ L P LVG + L + Sbjct: 244 YVGALVGGALAIGIAIFQFWGDWFSLGAVVVIFAVGQFLEGNILTPKLVGNSVGLHPVWL 303 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + L A + VI + I K ++ Sbjct: 304 IFALSVFGALFGFVGMLVAVPLAASLGVIARFLIAQYKTSR 344 >gi|229174027|ref|ZP_04301563.1| hypothetical protein bcere0006_31210 [Bacillus cereus MM3] gi|228609359|gb|EEK66645.1| hypothetical protein bcere0006_31210 [Bacillus cereus MM3] Length = 376 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYIIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEVERAARRF----GESNLLGKIQENLNIDVASMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPSMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G++G+ + A++ V+ S +K N Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVLVTHSYRFVKLN 375 >gi|329295579|ref|ZP_08252915.1| hypothetical protein Pstas_00795 [Plautia stali symbiont] Length = 123 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP G+ I + +I+ G ++ L + I + +VD LRP LVG K Sbjct: 1 MAFLSLIPAVGSAIVWVPAAIFFFATGALWKGLFLVGFFVIVVGLVDNILRPLLVGKDTK 60 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +P +GG+ G+ G IGP++ AL W +++ ++N+E + Sbjct: 61 MPDYLILIATLGGMEVYGINGFVIGPLIAALFIACWN--LLSGRDNRENV 108 >gi|304404775|ref|ZP_07386436.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304346582|gb|EFM12415.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 385 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 117/335 (34%), Gaps = 7/335 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + K P+L ++ + PI + + + ++ V ++ + Sbjct: 40 ISFIFTPFIVLAKTVLLPLLLTGVVYYLLNPIVDGLV-RLRLKRGYAILLLYVIIIAVIA 98 Query: 76 VPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + +L + ++ L++ ++Q + W+ H+ + Sbjct: 99 LVILAVIPLIRQQITSLITNFPSYSDQMEVQFREWIGSDFFNQLEQATGLNHMDLTDQVT 158 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L + + L+I+ + LF+ +DG +S+ + Sbjct: 159 SRISSVLTNTWHHL-----GGWLGAVTEIVLAIVTVPFVLFYLLKDGHKLSEVILGFIPT 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +++ I S G II++ G +L Y + G+ + L + A +++ Sbjct: 214 ALRPETRRVLHESNHQISSYIRGQIIISLCIGALLYIGYLIIGLEYSLVLAIAAACTSVV 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P+ ++ + + + I I K + P ++G +++ + F Sbjct: 274 PYLGPVIAITPALIVATVTSPTMLLKMIAVWTIVQLIEGKFISPQIMGKTLRIHPVTIIF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ G+LG+ + A++ VI Sbjct: 334 VILTAGNLFGILGIILAVPGYAVLKVISTHVFRWF 368 >gi|222110889|ref|YP_002553153.1| phytochrome sensor protein [Acidovorax ebreus TPSY] gi|221730333|gb|ACM33153.1| putative phytochrome sensor protein [Acidovorax ebreus TPSY] Length = 830 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 122/358 (34%), Gaps = 26/358 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + T+ + + ++ +I +++ LYF + P+ A ++ F P+ + K+ Sbjct: 47 LDATVPSLRFMIGLVIAALVVAGLYFGRTLLVPLALAFLLSFVLEPLVAQL--KRMGLPR 104 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +VIA V M + + E+ + + + R PG + Sbjct: 105 LPSVIAVVMAMLMVLGVGALFVGNEARELSAQLPSYQSTIRKKLRSLRQELRAPGMFDGA 164 Query: 121 EL---------------WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + P K+ + + + + ++ G + Sbjct: 165 KRTFDIVQREVEAAAPALSGATRAPAVQKVQVQPPVLSPANQLMAALSAVSGPLT----- 219 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 +++ + F D + +L L + ++ R + ++ + Sbjct: 220 QAGLVLVFVIFILLDRVDLRDRLLRLWGGNLHRATDAMDEAGDRITRYLTMQ-LLVNVTY 278 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+ + + WL GVP V G + A+M +P P A + L + L+ G Sbjct: 279 GIPMAAGLWLIGVPGAVLWGSLAAVMRFVPYLGPFIAAAFPLTLAFAVDPGWDLVLWTLG 338 Query: 286 AIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 I L + + + P+L G L L G +GL + P+ + L+ + Sbjct: 339 LIVLLELVSNNVIEPWLYGSSTGLSALSLIVAATFWAALWGPVGLIMSTPLTVCLLVI 396 >gi|39997096|ref|NP_953047.1| transporter [Geobacter sulfurreducens PCA] gi|39983986|gb|AAR35374.1| transporter, putative [Geobacter sulfurreducens PCA] gi|298506109|gb|ADI84832.1| membrane protein UPF0118 [Geobacter sulfurreducens KN400] Length = 370 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 112/325 (34%), Gaps = 4/325 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F PVL ALI+ + P+ + +++ + ++ + V+ F + Sbjct: 43 FLPVLLALILAYVLNPLVTWLEARRVPRVAAVLLVMALIVVVTAGAVTFFAVSIQKEVAR 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ A + +P +L+ + S L+ S +K Sbjct: 103 VEINLPAYATRLYDLIPGQAKAYLEIETPDKLYARIDSLVDELRGASFDLVKGALGVVQR 162 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F+S G FL + L++F D + + +L + + V Sbjct: 163 AFSSTLG--FLLTVAGYFITPVYLYYFLADLPRLRDGIMALVPGRARDRAAMLGSEIDGV 220 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIY 268 + G + ++ + G+ + +G ++ + +IP + ++ + Sbjct: 221 LSGFVRGQLAVCAILAVLYSIGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIVVSMIMA 280 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L ++ + W AI I + P +VG + L + L G + G+ G+ Sbjct: 281 FLKFHDMLHPLLCLGWFAIVQAIEGALITPAVVGNTVGLHPVVAILALFIGGQWFGIFGM 340 Query: 329 FIGPVLMALIAVIWKESIMAIKENK 353 + + A+I V+ + + + Sbjct: 341 LLAVPVAAVIKVLLRHGVEWYRATP 365 >gi|319651659|ref|ZP_08005786.1| hypothetical protein HMPREF1013_02398 [Bacillus sp. 2_A_57_CT2] gi|317396726|gb|EFV77437.1| hypothetical protein HMPREF1013_02398 [Bacillus sp. 2_A_57_CT2] Length = 362 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 106/330 (32%), Gaps = 11/330 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P + I + PI I + L Sbjct: 37 ILFAVFIPFVIGAFITYLLHPIVEKLHE-TGLHRGLAVFIIYFLFFGGISLALYKGIPAF 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++++L P++ + G + + T +I Sbjct: 96 IHQLRDLAENA----------PQFANQYRGWINLIQSKTSTWPDGLQTRIDDFIVAVEKR 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + F + L+Y + I + F+ +D + + L + R Sbjct: 146 LNNLLSKVITFFLNVLNYAVIIAVIPFISFYLLKDFSIMKKAAWYLTPRKWRKEGVLFLR 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V K + S G ++ G + +W+ + + LG I + +IP PI Sbjct: 206 DVDKSLGSYIRGQLLVCAAIGAISSLLFWIFDMRYPLLLGTIIGVTNVIPYFGPIIGAVP 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + ++ + F+ L P +VG + + L L+ G G+ Sbjct: 266 AVIIASALSVKMIVITIGIIIVLQFLEGNILSPLIVGKSLHMHPLLIMLALLAGGEAAGI 325 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LGL I ++A+I V + +NK+ Sbjct: 326 LGLIIAVPILAVIKVSIIHAKKHFSKNKQP 355 >gi|292670129|ref|ZP_06603555.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292648228|gb|EFF66200.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 340 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 128/344 (37%), Gaps = 17/344 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + I+L S + + + +L++ P F+ ++ + + AV+A Sbjct: 9 SIILAIACAILLSSFWLFQDLAFIIFLSLLLHLLLKPAVD-FMERRNKPRSIAAVLAIFL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + L + ++ V+++ + + +P + + + L+ Sbjct: 68 FVLVVVGIITLLSRSVVPSLQRFVTELPNIS-------ASIQQLPLLSDSVFVQNELLNL 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ L L+ + F + + +I F+ +DG I L Sbjct: 121 LDRLRSLGSEALRA---------SLSFLFGAFGKVIDFVIIIFVSFYLLKDGEEIKVWLT 171 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A ++ + +R+ ++ G+++ + + L G+P +++A Sbjct: 172 DLFPDSARARIIRLFDNLLSALRTYICSQLVMCATTGVLVFAFFQLMGLPYASVFALLSA 231 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I IP P +A+ I + A F++ I + P L+G + L Sbjct: 232 ISEFIPVLGPTIASALGIIMTASTVPELAIQTFIFYVILTQANHNIIYPALIGKSLHLHP 291 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G+V G +G G+F+ + ++ ++ + KE Sbjct: 292 VAVILGVVFGGEILGPAGMFLAVPFIVILKIVISDIYRDRKEQH 335 >gi|225575173|ref|ZP_03783783.1| hypothetical protein RUMHYD_03262 [Blautia hydrogenotrophica DSM 10507] gi|225037640|gb|EEG47886.1| hypothetical protein RUMHYD_03262 [Blautia hydrogenotrophica DSM 10507] Length = 388 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-ISKKEESSTFLAVIATVSVMCLF 74 ++ I+ + L F A I+ + + K F ++ + +CL Sbjct: 31 VLGIVGLLWQILFPFVLGAAMAFILNVPMHFLEEKLFVRKDGSKRRFARPVSLIGALCLV 90 Query: 75 IVPLLFLFYYGMLEMK-ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + +L + + E+ LV+ V RW +++ W L Sbjct: 91 VCIILLVVLVVVPELGKTLVALGKTIESTVPQVQRWAAELFQDNEQISEWIAQLDLDWHK 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDY----CLSIIFMIIALFFFYRDGFSISQQLD 189 + S + NG + M + C+ +F L + G + L Sbjct: 151 ALASALDVLRNGASSVLSSTWTVTMGIVKAMTNGCIGFVFACYILLQKEKLGRQVKMALR 210 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ Y + + + + G I A+ G + + P + +GV+ Sbjct: 211 AILPEKSETYTFHVLSLSYRTFANFVTGQCIEAVILGTMFFVLLTILKFPYALLIGVLIG 270 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IP AVS+ LL+ + A + I I + P +VGG + LP Sbjct: 271 FTALIPIFGAFIGCAVSVLLLLMVSPAKALIFIVIFLILQQIEGNLIYPHVVGGSVGLPS 330 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + G MG+ G+ I L +++ +++E + E ++K Sbjct: 331 IWVLVAVTVGGNLMGVAGMLIFIPLTSVVYSLFREWVHYRLEIRKK 376 >gi|86357127|ref|YP_469019.1| putative permease protein [Rhizobium etli CFN 42] gi|86281229|gb|ABC90292.1| putative permease protein [Rhizobium etli CFN 42] Length = 374 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 102/326 (31%), Gaps = 11/326 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S V Sbjct: 10 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATVG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F + L+ L + + + ++ W Sbjct: 69 ILIAFVIVFALALMILIPVLISQFNDFAERLPSYISQLQKFIAQSQHSLLPQWIRSQVGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 IKDNFSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++I+ + + I G + + G+ + L G+ + +G Sbjct: 184 AKVDQWIPRDYVNDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +++ IP + V+I + L ++ + F+ L+P LV Sbjct: 244 LFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLVVFFSG-QFLEGNILQPKLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L G +G Sbjct: 303 GSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|317010786|gb|ADU84533.1| hypothetical protein HPSA_02620 [Helicobacter pylori SouthAfrica7] Length = 360 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 138/372 (37%), Gaps = 32/372 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------E 56 + Q + + LY + F L A ++ + + + Sbjct: 1 MKAQYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLDKRFSHVKYFYIDR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S+ F +++ + + + IVPL F+ Y G E+ + + +WL Sbjct: 61 FSNVFSSLLCVLVLASVLIVPLYFIVYKGSNVFFEI------NFEKLSALIKWLKG---- 110 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 +E + + + F + ++ + +S G +F++ LFF Sbjct: 111 -TITENLSHFPTIHDEVSKFLANFSAASITGYLLKISSYVGKYGFKLITDALFILGLLFF 169 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F+ G + L KK+ V ++R L I I EG+ G Sbjct: 170 FFYYGERFYCYFLGVLP-LENNQSKKVFEEVAGILRIVLLTSLITVILEGVAFGVMIVWF 228 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDK 294 G LG++ + +++P G + + ++IY L G++ A + L+ + + ++D Sbjct: 229 GHDGWS-LGILYGLASLVPAVGGALIWIPIAIYELYHGSVNGAIFIALYSILLISVLIDS 287 Query: 295 TLRPFLV--------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L+P+L+ +K+ + FF ++ G+ G G+ +GP + A + + Sbjct: 288 VLKPYLIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYE 347 Query: 347 MAIKENKEKISS 358 + +++ Sbjct: 348 NYFIQKEQETCE 359 >gi|330811201|ref|YP_004355663.1| hypothetical protein PSEBR_a4251 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379309|gb|AEA70659.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 357 Score = 88.4 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 118/331 (35%), Gaps = 14/331 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P L AL++ + P+ K S T+ V + LL L Sbjct: 24 HPILTPFLVALLLAYLFDPVVDRLE-KLGLSRTWGVVAVFALFTLIVGALLLVLIPMLAK 82 Query: 88 EMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKT-N 144 ++ L + WL +P L + +SE +T + Sbjct: 83 QLLRLYELA-------PQMLDWLQHSAVPWVQSKLGLADGFWKFDKVKAAISEHMGQTTD 135 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + A+ G+ + + +++ + + F+ RD + ++ SL ++ Sbjct: 136 IVGVVLSQATASGLALIGWLANLVLIPVVAFYLLRDWDLMMAKIRSLLPRHREERIMTLT 195 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 +V+ + G ++ + G + + L G+ + +G+I + A++P + Sbjct: 196 GECHEVLGAFVRGQLLVMVALGFIYAAGLMLVGLELGLLIGLIAGLAAIVPYMGFVIGIG 255 Query: 265 VSIY---LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ G+++ + + + L P LVG I L + F ++ G Sbjct: 256 AALIAGLFQFGGDLYPMVGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVAVIFAILAGGE 315 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ + + A+I V+ + K++ Sbjct: 316 LFGFTGILLALPVAAVIMVLVRHMHDLYKDS 346 >gi|310829307|ref|YP_003961664.1| hypothetical protein ELI_3745 [Eubacterium limosum KIST612] gi|308741041|gb|ADO38701.1| hypothetical protein ELI_3745 [Eubacterium limosum KIST612] Length = 395 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 16/322 (4%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + S A + + +M L + +L L V+ + Q Sbjct: 75 KRVQRLRRPLSILAAFLILIGIMALVVFLVLPELVNAALLFARSFPSVLESFQS------ 128 Query: 109 WLSDIPGGMWASELWTKHLSHPQ-------SLKILSETFLKTNGIDFIPR---FASRFGM 158 W S I G + + + L L +F + F+ A+ Sbjct: 129 WASRILGEHSEASAFIQKLDTGGLESLNWDMLSKNLFSFFRGGAAGFLSTTLNVAASVAG 188 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + ++ + LF R G + L + +I + + G Sbjct: 189 GVFHTVIGLVVAVYLLFQKERLGLQTRKLLYAYLPEKRVDRLLEIVGLTQETFSHFVSGQ 248 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 I A+ ++ + +P + + V+ + ++IP I + +L++ + A Sbjct: 249 CIEALILTVIYTIILSILQMPYALTIAVLIGLFSLIPVFGAIVACCLGAFLILTLSPVKA 308 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + I + + P +VG I L L + G G+LG+ + L +++ Sbjct: 309 LIFVVACFIVQHVEGNLIYPHVVGSSIGLSPLWILAAVTIGGGAFGILGIIVMIPLFSVL 368 Query: 339 AVIWKESIMAIKENKEKISSNF 360 + E++ + Sbjct: 369 YTLTGETVNRRLSQRHVDPQKL 390 >gi|331006457|ref|ZP_08329760.1| Putative permease PerM [gamma proteobacterium IMCC1989] gi|330419757|gb|EGG94120.1| Putative permease PerM [gamma proteobacterium IMCC1989] Length = 365 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 117/334 (35%), Gaps = 12/334 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 V ++ L PVL+A+II F + S +K + +AV T + + + L+F Sbjct: 29 FVVIWSLGDVLGPVLAAIIIAFLMQGMMVSLKNKGLPHWSAVAVAITFLISVMVLA-LVF 87 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + L ++ G + L + + + H + Sbjct: 88 IIPALWEQALSLSKELPRMVTQGRDLLLHLPESYPTFITEGQVEQLILHASTRLASFGQV 147 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +P + L L ++ + + +FFF +D S+ + SL P Sbjct: 148 VVSFSVANLP--------VLLTGLLYMVLVPLLVFFFLKDSQSMLTWVGSLLPKERPV-M 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 KI + + I + G I + G+V ++ + G+ V L + + +IP GA Sbjct: 199 NKIFAEMNQQIANYVRGKVIEILVVGIVSYISFTILGLNYAVLLALAVGLSVVIPYVGAV 258 Query: 260 ISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + V + + L + + + L P L +KL + ++ Sbjct: 259 LVTIPVLLIGFFQWGWGYELLYLTIVYFVIQGLDGNVLVPLLFSEAVKLHPVAIILAVLI 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+F L L+ I E Sbjct: 319 FGGLWGFWGVFFAIPLATLVKAIINAWPSPQSER 352 >gi|56421067|ref|YP_148385.1| hypothetical protein GK2532 [Geobacillus kaustophilus HTA426] gi|56380909|dbj|BAD76817.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 341 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 114/332 (34%), Gaps = 4/332 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW+I+ ++ +L + P+L AL P + + Sbjct: 1 MKRWIIIALLFAVGLWLVPYSVPLLFALATALLLEPSIRRLQENYKLKRAHAVTVIFSLF 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + L FL + ++ L K+ V L ++S + + + Sbjct: 61 IIILGLSLYFLVVIFVQQVMALSQKLPYVLNEATKVLDRLIQT-WQSYSSSIPQEIIDSL 119 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + E L + + I + + + +IALF D + Q + Sbjct: 120 ERGVNTVEQMLLSFATNLTQSLVHYIAAI-PAFLIHFLVYLIALFLICLDLPQLKQGMRR 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K ++++ + + ++ GV + ++ + Sbjct: 179 YLSERTEQRLGMVVAQLSKAGIGFLKAQFLLSLITFFLALAGLFVLGVDYAALMALVIVV 238 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P G + + GN L + + + +V + + P + + + Sbjct: 239 VDILPILGTGSVLVPWGLISMANGNNTLGIGLIVL-FVVITVVRRIIEPKVFSTNLGISP 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + G + +G +GLF+GPV++ L+ + Sbjct: 298 LAALVSVYLGFQLLGFIGLFVGPVVVILVEAL 329 >gi|14591352|ref|NP_143430.1| hypothetical protein PH1571 [Pyrococcus horikoshii OT3] gi|8928494|sp|O59276|Y1571_PYRHO RecName: Full=UPF0118 membrane protein PH1571 gi|3258000|dbj|BAA30683.1| 341aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 341 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 122/333 (36%), Gaps = 28/333 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 LK AP++ + + ++P + K + ++ L + +S+ L + + + Sbjct: 26 LKDLIAPIVFGMAASYIAYPFHIKLSKKVGKRNSVLILSGILSIFSLIF--FVGVTLWIT 83 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +K L + + WLS + + S L+ L T+ Sbjct: 84 DTLKNLYNYLDAFF-------SWLSTLNVPGFLSSLFDA---------------LATSFP 121 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + ++ + L +I + + + +++++ L +K+ Sbjct: 122 EKLRSILLQYTLSLPKLALQLIVFLAVFYATLLNADFLAKEIYELLPLTNRELGEKMIEK 181 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLA---GVPSHVALGVITAIMAMIPGGAPISFT 263 V + + ++ +G+ L ++L V +A GV+ ++ ++P Sbjct: 182 VKDTVDAILKTWLFFSVVKGIFLALGFYLFKISNVAGSIAAGVLCIVLELLPVVGGWIMW 241 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +L++ ++ A ++G I + I D L+P K+ + G+ GG Sbjct: 242 LAGAIILLRRSMLLAIIFAIYGIITISPIPDYFLKPKFAKERAKVSSVVALVGIFGGWIA 301 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +G+ +GP+ + L+ + + K Sbjct: 302 FGAVGIILGPIAIGLLLALIDAWREIGTKQPSK 334 >gi|261838190|gb|ACX97956.1| outer membrane protein [Helicobacter pylori 51] gi|317179069|dbj|BAJ56857.1| membrane protein [Helicobacter pylori F30] Length = 348 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 135/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLVLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|227534424|ref|ZP_03964473.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187931|gb|EEI67998.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 405 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 118/345 (34%), Gaps = 19/345 (5%) Query: 17 MFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +F+ + + P + A I+ + + PI + K + Sbjct: 48 IFVFTKIAWVFQPVLDFLGIIAPPFIFAGILFYLTVPIINRLE-KFGLHRGWA------- 99 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + LFIV + L + + + + +++ + + + + Sbjct: 100 IGLLFIVLIGLLAWGLLRFIPAVSNQITSIVHSAPQIFDEIGKWLDNLNDQQNILSQHDL 159 Query: 130 PQSLKILSETFLKTNGIDFIPRFAS--RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + F G + I + ++I I LFF +DG + Sbjct: 160 NEIAAEVQSFFTGKQGAFVTGTISQLQNLIGIVGNVVITISTAPIILFFMLKDGDKFTPM 219 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + K++ + + + S G +A+ ++ Y + G+ + G++ Sbjct: 220 VLHIVPTKLRRSVKQMLHEMNEKVGSYVQGQITVALCVAVMFMVGYSVIGLRYGLIFGLL 279 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP G+ ++ I + + + + IE I + + P ++G ++ Sbjct: 280 ACPLNLIPYFGSALAMIPPLIMGALT-SPRMILAVIIVFFIEWLIETQVISPLVMGSKLE 338 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L+ GL+G+ +G A++ ++ ++ Sbjct: 339 LHPITIVVVLLTAGNLFGLVGVILGIPGFAVLKIVVTRFFSWYQQ 383 >gi|327400680|ref|YP_004341519.1| hypothetical protein Arcve_0788 [Archaeoglobus veneficus SNP6] gi|327316188|gb|AEA46804.1| protein of unknown function UPF0118 [Archaeoglobus veneficus SNP6] Length = 329 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 116/318 (36%), Gaps = 17/318 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 ++ ++ + + PI K ++IAT+ ++ + + + + G+ + Sbjct: 26 PLLDGIVMGIVFAYVAKPIKKRVEEKTG--KAAASLIATLLIIVPIFILMFYGIFQGINQ 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + L + Q +S + + S+ L++ LK + ID Sbjct: 84 LVYLFTHQHEVEQM------LVSTLRDAGIDEKYIEDVRLWIPSVISLAQGKLKISAIDV 137 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 R + + ++ I I F+ D S ++ + + V Sbjct: 138 TIR--------AVMFFMNFIISAIVCFYVLLDADSFVRKTIRIFPESRQKEIARFIAEVD 189 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSI 267 + + + + G A+ GLV + +P L + + A+IP A + V++ Sbjct: 190 ETLLALWFGNFAFAVIIGLVSIPFFMAFRIPYAPLLSGLMFLAALIPVFAEWMVLAPVAL 249 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L + + F+ + LRP+ VG ++ L +GG G+ G Sbjct: 250 FLALTNLNMAIWFTAIGFLFLYFLPEVVLRPYFVGHASRIHPLALLLAFIGGAMVGGVAG 309 Query: 328 LFIGPVLMALIAVIWKES 345 F+ P+++A+I ++ Sbjct: 310 FFVAPMVVAVITAVYNYY 327 >gi|157273433|gb|ABV27332.1| domain of unknown function protein [Candidatus Chloracidobacterium thermophilum] Length = 432 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 126/352 (35%), Gaps = 13/352 (3%) Query: 11 IMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFI-------SKKEESSTFL 62 + W ++ +LV L Y + F P+L + + + P+ T Sbjct: 44 LAAWGLLSGLLVHLSYIFQPVFVPLLISGALAYLIKPLADWLEHFGKQWVRPAGLRHTLS 103 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++A + + L + ++ ++ Q G+ V + + + + Sbjct: 104 VLMAMAVAVLGLALGLFVVIPSLATQLTLAAKRLPAGYQRGMAVAQPILE-GLQQRYPKQ 162 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + ++ ++ F++ G+ ++++ + +++ +D Sbjct: 163 YEQVVAAIHDRIADPSALIEPILAGLSATFSNAIGVAT--SLINLLLIPFFVYYILKDAG 220 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++L L A + V + S G I+ L+ + L G+PS + Sbjct: 221 RLERRLLLLVPMRHRAIVDDMVSKVDLALSSFVRGQLIVCFLMSLLYTLGFSLLGIPSAL 280 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFL 300 +LG ++ ++P ++ + + ++ + + I L PF+ Sbjct: 281 SLGFLSGFGHLVPYIGTFLAGLLTCTIALSDAPSLVQLGLVIGVYVVVQSIESFYLTPFV 340 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G + L GL+ G G+LG+ + +A+ V+ S+ + + Sbjct: 341 LGERLDLHPFLVIVGLLIGHHLFGILGVVLTVPCLAVGKVLVGISLEYYERS 392 >gi|315453202|ref|YP_004073472.1| outer membrane protein [Helicobacter felis ATCC 49179] gi|315132254|emb|CBY82882.1| Outer membrane protein [Helicobacter felis ATCC 49179] Length = 353 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 141/360 (39%), Gaps = 29/360 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + LY + F +L A ++ T + + F +++ Sbjct: 1 MRPVYFFWLLFCVAFYWMLYLYEDFLMDLLIAGLLCVTIFWLKEFLDKYM--RDLFSSLL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMK--ELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V ++ ++PL F+ + + + L N+ V +L P ++ + Sbjct: 59 CVVVLLSFLVIPLYFIIHQSVDFLSHINLEKLSFFFNKFKADVLIFLDRFPAINTDAKNF 118 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 HLS + + ++ RF+S G L + +++ LF + G Sbjct: 119 ISHLSA-------------QSIMSYVLRFSSDIGKYSLKLASDTVMVLVFLFLCFFYGRH 165 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + K I R V ++R L I + +G+ G+ + ++ Sbjct: 166 FYSYILEILP-FEKIQSKGIFREVAGILRVVLLTSIINVVLQGVAFGALVVWFDLDW-LS 223 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV 301 LG++ + ++IP G + + V++Y + + + A + ++ + + ++D ++P+L+ Sbjct: 224 LGILYGLASLIPIVGGSLVWIPVALYEMYRDHTTIAIVIAIYSIVLIGGLIDSLIKPWLI 283 Query: 302 GG--------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +K+ + FF ++ G+ G G+ +GP + A V+ + + + K Sbjct: 284 GFIKHRILKISLKINEILIFFSILAGISKFGFWGIAVGPTITAFFIVLLRLYEHSFIKPK 343 >gi|282163180|ref|YP_003355565.1| hypothetical protein MCP_0510 [Methanocella paludicola SANAE] gi|282155494|dbj|BAI60582.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 350 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 103/288 (35%), Gaps = 11/288 (3%) Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++PL+ + YG++ + V + + + I G ++ + Sbjct: 70 IATFCILLPLIAIIAYGVVSVLGEAEWVFQHSGELGDMI--IGTIEGLGLPFDVNAGLDT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + TFLK+ I R + ++ + + F+ +DG S + + Sbjct: 128 GLKGLYDYTITFLKSLPI-------GRTFSGIISLAMNALVSLFVCFYLLKDGGSFTAIV 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +++ F G A+ + + + G+P L Sbjct: 181 REVVPARHKPALDMFLTEADRILSGIFTGTFYTALYIAVGALVLFVIFGIPYKALLTAFV 240 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIK 306 I AM+P + + F V+IYL + + + +++ D +RP+++ Sbjct: 241 FIAAMVPILSGMMVFIPVAIYLYMFRSPIIGLLFLGLAVVFIYLPPDYVIRPYIINRASN 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L +GG GL G F P+ + L +++ +++ Sbjct: 301 LHPLLIILAFIGGGVAGGLSGFFAAPMAIGLATALYRTYKKTKGNDED 348 >gi|217960763|ref|YP_002339327.1| membrane protein YubA [Bacillus cereus AH187] gi|301054849|ref|YP_003793060.1| hypothetical protein BACI_c33060 [Bacillus anthracis CI] gi|217067714|gb|ACJ81964.1| membrane protein YubA [Bacillus cereus AH187] gi|300377018|gb|ADK05922.1| putative membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 373 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 100 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|149919863|ref|ZP_01908339.1| hypothetical protein PPSIR1_12198 [Plesiocystis pacifica SIR-1] gi|149819310|gb|EDM78743.1| hypothetical protein PPSIR1_12198 [Plesiocystis pacifica SIR-1] Length = 482 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 9/206 (4%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D F ++ I + F D I + SL ++ ++ ++ Sbjct: 225 TDLAAAGVRGFISGVANFLADFILAFLIAAFVLVDTQRIGRFTRSLVPEVYLGEFEDLAA 284 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 + + + G +I + G + + GV + L ++ A++++IP G I+ Sbjct: 285 GIDEGMAGVARGQILICVINGTLTYIGLLIFGVHYSLLLAMVAAMLSIIPVAGILIATIP 344 Query: 265 VSIYLLIKGNI--------FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 V L+ G++ + + W + L P ++G + + F L Sbjct: 345 VMGVALLSGDLGLEAGLAFGKSAAVLGWLVGIHLLETNYLNPKIIGIASNIHPVVLIFAL 404 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIW 342 + G+ GLLG + + ++ ++ Sbjct: 405 LAGLDVGGLLGAVLAIPVASVFQTVF 430 >gi|218898431|ref|YP_002446842.1| membrane protein YubA [Bacillus cereus G9842] gi|218545728|gb|ACK98122.1| membrane protein YubA [Bacillus cereus G9842] Length = 373 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 100 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|312962336|ref|ZP_07776827.1| hypothetical protein PFWH6_4255 [Pseudomonas fluorescens WH6] gi|311283263|gb|EFQ61853.1| hypothetical protein PFWH6_4255 [Pseudomonas fluorescens WH6] Length = 357 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 128/342 (37%), Gaps = 14/342 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ V ++ L P L AL++ + P+ T+ V+ +F + Sbjct: 13 IVLLCVFVFLLHSILTPFLVALLLAYLFDPVVDRLEKAGLSR--------TLGVVAVFAL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L + ++ + L ++ + + WL +P L + Sbjct: 65 FTLIITALVLVLVPMLAKQLFRLYELAPQMLDWLQHTAMPWAQAKLGLSDGFWKFDKVKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE +T + + I A+ + + + +++ + + F+ RD + ++ SL Sbjct: 125 AISEHMGQTTDIVGVILSQATASSLALIGWLTNLVLIPVVAFYLLRDWDIMMAKIRSLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + G+ + +G+I + A+ Sbjct: 185 RDREERIVSLAGECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLIGLIAGLAAI 244 Query: 254 IPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + ++ G+++ + + + L P LVG I L + Sbjct: 245 VPYMGFVIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F ++ G G G+ + + A+I V+ + K++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDS 346 >gi|228993324|ref|ZP_04153240.1| Sporulation integral membrane protein YtvI [Bacillus pseudomycoides DSM 12442] gi|228999377|ref|ZP_04158956.1| hypothetical protein bmyco0003_39320 [Bacillus mycoides Rock3-17] gi|229006932|ref|ZP_04164562.1| hypothetical protein bmyco0002_38330 [Bacillus mycoides Rock1-4] gi|228754332|gb|EEM03747.1| hypothetical protein bmyco0002_38330 [Bacillus mycoides Rock1-4] gi|228760322|gb|EEM09289.1| hypothetical protein bmyco0003_39320 [Bacillus mycoides Rock3-17] gi|228766392|gb|EEM15035.1| Sporulation integral membrane protein YtvI [Bacillus pseudomycoides DSM 12442] Length = 363 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 128/349 (36%), Gaps = 12/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + I +L ++ G P + AL + P+ + K + +++ + Sbjct: 2 RLIFVILATTIGFYALLYVSGLIYPFIIALAFAYLINPVVNFLNQKLQFPRALAVLVSLI 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L +K Sbjct: 62 LVFGAIVGLVTYLVTEAISATTYLLQIVTEKFPAIVQYAQQFALNNIMPLYDDLISKFNH 121 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +S + ++ G + I + F ++F+++A FF Sbjct: 122 LGESQQYTITQNIQNLGTEATKQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 181 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +++ ++ L + Y K I + K + + +++ + V Sbjct: 182 FDWHTLAHKVKRLLPNRIHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 241 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + + +IT I+ ++P G F IY+ G+ L + + + + + + Sbjct: 242 PYAITIAIITGIVDLLPYLGTGAVFVPWIIYVFFTGDTAFTIGLLILYIVVI-VQRQIME 300 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P ++ I L LPT L G + G LGL IGPV + L+ + K + Sbjct: 301 PKVLSSNIGLDPLPTLIALFVGFKLYGFLGLIIGPVTLVLLNTLHKAHV 349 >gi|239626667|ref|ZP_04669698.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516813|gb|EEQ56679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 419 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 113/344 (32%), Gaps = 4/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + + F A I+ I + +E S V V+++ + Sbjct: 31 LLEVAAALFHMAWPFILGAAIAFILNVPMRNIERHLVMFRENSRLRRPVSLVVTILLVSG 90 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLSHPQSLK 134 + L F +K ++ + + + + Q + Sbjct: 91 ILFLVTFVVTPQLLKTFLTLQSSVPLFFAGLKDEMEQLFASFPQILDYVNHVEVDWQQVF 150 Query: 135 ILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 FLKT + A + + IF I L G + + L + Sbjct: 151 QDMMGFLKTGAGTMLNNTFSAAVSIVSGVSSFLIGFIFAIYILLQKETLGRQVRKLLSAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +I+ + + + G + A+ G + L +P + +GV+ A Sbjct: 211 LPESVTGRIVEIASLTERTFSNFLTGQCVEAVILGTMFFVVLTLGRLPYALLIGVLIAFT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP V ++L++ +A + + I + P++VG + LP + Sbjct: 271 ALIPIFGAFIGLGVGVFLMLMVEPMDALIFTIIFFVLQQIEGNLIYPYVVGNSVGLPSIW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G MG++G+ I L +++ + ++ + + Sbjct: 331 VLVAVTLGGSMMGIVGMLIFIPLCSVLYALLRDEVNGRLNRPKP 374 >gi|330469076|ref|YP_004406819.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032] gi|328812047|gb|AEB46219.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032] Length = 416 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 107/295 (36%), Gaps = 13/295 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + +S + + L + ++ + +L + + WL Sbjct: 111 WLLRLRVPRSLATAVVLISGLGAVVGTLTLVVNQFIVGLPDLSVRAAAGI---GQIQDWL 167 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D P G+ +L + + + S++ + A ++ + + Sbjct: 168 RDGPLGLSDGQLNGYVEAGQKWINENSQS---------LTSGAINTAGTVVEVFTGTLLV 218 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + A+FFF RDG I + L + R + + ++A + L +G Sbjct: 219 LFAMFFFLRDGDRIWRFLVGMLPVAARWRTDDAGRASWLTLVAYVRATVLVAFIDALGIG 278 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 A L VP L + + A IP GA +S + L+ A + + Sbjct: 279 IALVLFDVPFAFPLAALVFLGAFIPIVGATLSGAVAVLVALVDSGWVTALAILGAVIVVQ 338 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L+P+++G + L LP + GV G++G + L+A++ + Sbjct: 339 QVEGNVLQPWIMGRAVALHPLPVVLAVTAGVVLDGIVGALVAVPLIAVLNTAVRR 393 >gi|317009456|gb|ADU80036.1| outer membrane protein [Helicobacter pylori India7] Length = 348 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 135/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLVLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGIHQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|158317061|ref|YP_001509569.1| hypothetical protein Franean1_5305 [Frankia sp. EAN1pec] gi|158112466|gb|ABW14663.1| protein of unknown function UPF0118 [Frankia sp. EAN1pec] Length = 464 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 115/345 (33%), Gaps = 21/345 (6%) Query: 17 MFIILVSLYFL-------KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + II ++Y L + PV++ L+I PI F + A A + Sbjct: 129 LLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAALIHPIAHRF-QRMGVPRLGAAFAALLI 187 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + + + E+ + +V V +L+D P + ++ Sbjct: 188 FLLLVVGAGVAVGFNAANEIPAVADQVSEGVD---QVRDYLTDGPFHLSQGQIDNLVDDI 244 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S+ T+ + + + SI+ + + FFF DG I + Sbjct: 245 RSSI---------TSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIV 295 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + R + G +A + + + G P L ++T Sbjct: 296 TRFPSGAEDRVRGAGREAWLTLTGYIRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTF 355 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP GA ++ A + L+ + +A + + L+P ++ ++L Sbjct: 356 FGGFIPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGHLLQPLVMRRAVRLH 415 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L G G+ G +A++ + A K+ + Sbjct: 416 PLAIVIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQ 460 >gi|324327274|gb|ADY22534.1| hypothetical protein YBT020_16520 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 373 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 100 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|228940410|ref|ZP_04102980.1| hypothetical protein bthur0008_30580 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973326|ref|ZP_04133915.1| hypothetical protein bthur0003_30860 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979889|ref|ZP_04140210.1| hypothetical protein bthur0002_30620 [Bacillus thuringiensis Bt407] gi|228779904|gb|EEM28150.1| hypothetical protein bthur0002_30620 [Bacillus thuringiensis Bt407] gi|228786522|gb|EEM34512.1| hypothetical protein bthur0003_30860 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819252|gb|EEM65307.1| hypothetical protein bthur0008_30580 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 376 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|229543555|ref|ZP_04432615.1| sporulation integral membrane protein YtvI [Bacillus coagulans 36D1] gi|229327975|gb|EEN93650.1| sporulation integral membrane protein YtvI [Bacillus coagulans 36D1] Length = 372 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 122/350 (34%), Gaps = 14/350 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G+ + + + ++Y + P + AL+I P+ + K +I+ + Sbjct: 11 RGLFVALCILVGFFAVYLAVKYAYPFIIALLIALMINPLVNFLDRKVRLPRALAVLISLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ +F+ + L + L + Q + L + + Sbjct: 71 LIIGVFVGIITLLVAEIVTGANYLADVLPEHVQTLVNYSESLVTAQV-LPLYDQLAGLFK 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFL-----------DYCLSIIFMIIALFFF 177 + + + + I A F + +IF ++A FF Sbjct: 130 NLDAGQQETIVQNIQAAGQKIASSAGDFLSGLFKKLPGLVSWIPNAATVLIFALLATFFI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D ++ + L + + + + +++ + Sbjct: 190 SKDWNQLTGKGKLLLPKKARKSGITVFADLRNALFGFVRAELTLISMTLVIVLIGLLILR 249 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + + ++ I+ ++P G + F IY I G++ A L + + + + + + Sbjct: 250 VDYAITIALVCGIVDILPYLGTGVVFVPWIIYEFITGSLPLAIGLTVLYIVVI-VQRQIM 308 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P ++ I + L T L G +T+G LGL +GP+ + L+ + + + Sbjct: 309 EPKILSSSIGMNPLATLIALFIGFKTVGFLGLILGPITLVLLTALIRAHV 358 >gi|165868397|ref|ZP_02213057.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167631786|ref|ZP_02390113.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167637242|ref|ZP_02395522.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170684738|ref|ZP_02875963.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170704986|ref|ZP_02895451.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177649869|ref|ZP_02932870.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190564566|ref|ZP_03017487.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196035580|ref|ZP_03102984.1| putative membrane protein [Bacillus cereus W] gi|196038071|ref|ZP_03105381.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196042964|ref|ZP_03110203.1| putative membrane protein [Bacillus cereus 03BB108] gi|218904496|ref|YP_002452330.1| hypothetical protein BCAH820_3380 [Bacillus cereus AH820] gi|225865335|ref|YP_002750713.1| YubA [Bacillus cereus 03BB102] gi|227813813|ref|YP_002813822.1| hypothetical protein BAMEG_1218 [Bacillus anthracis str. CDC 684] gi|229604616|ref|YP_002867574.1| hypothetical protein BAA_3443 [Bacillus anthracis str. A0248] gi|254685931|ref|ZP_05149790.1| permease [Bacillus anthracis str. CNEVA-9066] gi|254723334|ref|ZP_05185122.1| permease [Bacillus anthracis str. A1055] gi|254738401|ref|ZP_05196104.1| permease [Bacillus anthracis str. Western North America USA6153] gi|254742432|ref|ZP_05200117.1| permease [Bacillus anthracis str. Kruger B] gi|254752717|ref|ZP_05204753.1| permease [Bacillus anthracis str. Vollum] gi|254761231|ref|ZP_05213255.1| permease [Bacillus anthracis str. Australia 94] gi|164715123|gb|EDR20640.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167514749|gb|EDR90115.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167532084|gb|EDR94720.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170129841|gb|EDS98703.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170670998|gb|EDT21736.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172083821|gb|EDT68880.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190563883|gb|EDV17847.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195991881|gb|EDX55845.1| putative membrane protein [Bacillus cereus W] gi|196026448|gb|EDX65116.1| putative membrane protein [Bacillus cereus 03BB108] gi|196031341|gb|EDX69938.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|218540215|gb|ACK92613.1| putative membrane protein [Bacillus cereus AH820] gi|225786385|gb|ACO26602.1| YubA [Bacillus cereus 03BB102] gi|227004470|gb|ACP14213.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229269024|gb|ACQ50661.1| putative membrane protein [Bacillus anthracis str. A0248] Length = 373 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 100 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|163848208|ref|YP_001636252.1| hypothetical protein Caur_2657 [Chloroflexus aurantiacus J-10-fl] gi|222526116|ref|YP_002570587.1| hypothetical protein Chy400_2873 [Chloroflexus sp. Y-400-fl] gi|163669497|gb|ABY35863.1| protein of unknown function UPF0118 [Chloroflexus aurantiacus J-10-fl] gi|222449995|gb|ACM54261.1| protein of unknown function UPF0118 [Chloroflexus sp. Y-400-fl] Length = 432 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 120/353 (33%), Gaps = 23/353 (6%) Query: 9 QGIMRWMIMFIILVSL-YFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + RW+++ + + + L P + ++ + P+ + F +LA+ Sbjct: 10 RQAARWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWL---PRWLAI 66 Query: 65 IAT--------VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + V+ + + PL+ + + ++ + AN+ + L+ +P Sbjct: 67 LTVYLLTFGAIVAAIAFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLLASLPPA 126 Query: 117 MWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + A + + L L F+ F+ + + + L + L Sbjct: 127 LQAEVQSAIASATAEGLSTLRANFVSYLQGVGQFLVNSVLSV-VNTVTFLLGFFLVPFWL 185 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ D + LD + A + + I+ + G I+ GL Sbjct: 186 FYVLMDQRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAAWIGLT 245 Query: 235 LAG-----VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 +P V L V+ + ++P PI +I L + + A + + Sbjct: 246 ALNMAGMNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAIQ 305 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + L P ++G + + LV + GLLG + L A+ ++ Sbjct: 306 QLENHILVPRIIGESVGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLF 358 >gi|298286885|sp|Q04454|Y178_BACPE RecName: Full=UPF0118 membrane protein BpOF4_00890; AltName: Full=ORF2 Length = 385 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 115/325 (35%), Gaps = 2/325 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + LV+ YF+ P+++AL+ P ++ K + ++ + + Sbjct: 49 ILLFLVAAYFILPVSLPLVAALLTALILTPAVNALQRKTKIKRNVAVMLVFTVFVVFIGL 108 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + ++V + + ++ Sbjct: 109 SGYYIATKAITQGTQIVENSPQYISDINRAWLNFQRNLEEKYENLPPELVQEINITVTNT 168 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + Y ++ + +IALF F + + ++L S Sbjct: 169 LSDLRSNISDRNLIQDITSLISSIPGYLVTFLVYLIALFLFMLELPRLREKLYSYLSERT 228 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++ + VI F +++I +V + + I ++ +P Sbjct: 229 KEKVNFMTSRLSYVIWGFFKAQFLVSIIIFIVTLIGLLFIAPEVALLMAFIIWLIDFVPI 288 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ + +I+ LI G++ + L + A L I+ +T+ P ++G I L L T Sbjct: 289 IGSIVILAPWAIFQLIVGDVSTGSKLLIL-AAVLLIIRRTVEPKVMGKHIGLSPLATLIA 347 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAV 340 + G+ G++G IGP+L+ Sbjct: 348 MYLGLMLFGVIGFIIGPLLVIAFTS 372 >gi|229031038|ref|ZP_04187052.1| hypothetical protein bcere0028_30950 [Bacillus cereus AH1271] gi|228730284|gb|EEL81250.1| hypothetical protein bcere0028_30950 [Bacillus cereus AH1271] Length = 376 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYIIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPSMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G++G+ + A++ V+ S +K N Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVLVTHSYRFVKLN 375 >gi|154686882|ref|YP_001422043.1| YrrI [Bacillus amyloliquefaciens FZB42] gi|154352733|gb|ABS74812.1| YrrI [Bacillus amyloliquefaciens FZB42] Length = 353 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 111/318 (34%), Gaps = 15/318 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +K F P+ A+ I + PI K ++ + + CLF + + Y Sbjct: 37 LVIKSLFIPIFIAVFIAYLLLPITEWLHRKGMPR-----TLSLLLIYCLFFGGIGWGVYK 91 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 G+ + E + + + + L P + + ++ Sbjct: 92 GVPVLIEQLQDLSESIPGLAKNYNSM--------LKHLHNHTDHWPDGMHHRMDKMIQQT 143 Query: 145 GIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 S I LDY L + +F+ +D + + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVLDYILIAATIPFLVFYMVKDIDVMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL+ G ++WL G+P + LG+ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGLIAGVSFWLFGLPYPLILGLAIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPALLLALAISAKAVIIVIVTIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAV 340 G+ G+ + A++ V Sbjct: 324 AGIPGMILAVPAAAVLKV 341 >gi|310659377|ref|YP_003937098.1| hypothetical protein CLOST_2073 [Clostridium sticklandii DSM 519] gi|308826155|emb|CBH22193.1| conserved membrane protein of unknown function [Clostridium sticklandii] Length = 373 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 119/321 (37%), Gaps = 4/321 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L FF P + II + P+ + + ++I + + L I+ F Sbjct: 31 LAVFFMPFVIGWIIALIANPLVKFLENHVKIVRKHGSMIIIIFALTLVIITGYFGISRIY 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTN 144 E+ L+ + +S G++ E LS + +N Sbjct: 91 KELITLIQNLPEIYNSLSLDIEKISHNFQGIYKLMPEEVQISLSSIGEELSVGAANGISN 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A RF ++II I+A +FF D +IS+ + +L A + I+ Sbjct: 151 IGKPTFTAAGRFAKNIPSTFINIIITILAAYFFIVDKENISRGIKNLVSDDIFAVFTDIT 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + ++ F I ++L + + + L + A++ P G Sbjct: 211 NRLKFLVGGYFKAQFKIMGIVAVILFVGFLILDIGYSFLLALGIALLDFFPFFGTGAVLI 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I+ ++ G+ A LFL I +V + ++P ++G I L L T F + G + Sbjct: 271 PWTIFKVLTGDYRLAIGLFLIYIISQ-VVRQIVQPKVLGDTIGLNPLATLFFMFIGFKLG 329 Query: 324 GLLGLFIGPVLMALIAVIWKE 344 ++GL + + + ++E Sbjct: 330 SVIGLVLAVPIGMIFINFYEE 350 >gi|297529302|ref|YP_003670577.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] gi|297252554|gb|ADI26000.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] Length = 341 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 113/332 (34%), Gaps = 4/332 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RWMI+ ++ +L + P+L AL P + Sbjct: 1 MKRWMIIALLFAVGLWLVPYSVPLLFALATALLLEPSIRRLQENYKLKRVHAVTAIFSLF 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + L FL + ++ L K+ V L ++S + + + Sbjct: 61 IIILGLSLYFLVVIFVQQVMALSQKLPYVLNEATKVLDRLIQT-WQSYSSSIPQEIIDSL 119 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + E L + + I + + + +IALF D + Q + Sbjct: 120 ERGVNTVEQMLLSFATNLTQSLVHYIAAI-PAFLIHFLVYLIALFLICLDLPQLKQGMRR 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K ++++ + S ++ GV + ++ + Sbjct: 179 YLSERTEQRLGMVVAQLSKAGIGFLKAQFLLSLITFFLALSGLFVLGVDYAALMALVIVV 238 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P G + + GN L + + + +V + + P + + + Sbjct: 239 VDILPILGTGSVLVPWGLISMANGNNTLGIGLIVL-FVVITVVRRIIEPKVFSTNLGISP 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + G + +G +GLF+GPV++ L+ + Sbjct: 298 LAALVSVYLGFQLLGFIGLFVGPVVVILVEAL 329 >gi|217032380|ref|ZP_03437875.1| hypothetical protein HPB128_25g28 [Helicobacter pylori B128] gi|298736258|ref|YP_003728784.1| hypothetical protein HPB8_763 [Helicobacter pylori B8] gi|216945947|gb|EEC24563.1| hypothetical protein HPB128_25g28 [Helicobacter pylori B128] gi|298355448|emb|CBI66320.1| conserved hypothetical membrane protein [Helicobacter pylori B8] gi|317012381|gb|ADU82989.1| hypothetical protein HPLT_02815 [Helicobacter pylori Lithuania75] Length = 348 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 136/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|217033512|ref|ZP_03438941.1| hypothetical protein HP9810_905g31 [Helicobacter pylori 98-10] gi|216944037|gb|EEC23468.1| hypothetical protein HP9810_905g31 [Helicobacter pylori 98-10] Length = 331 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 131/345 (37%), Gaps = 25/345 (7%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y + F L A ++ + + + + + + + + IVPL F+ Y Sbjct: 2 IYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVLVLASVLIVPLYFIVY 59 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E+ + + +WL +E + + E F Sbjct: 60 KSSNIIFEI------NFEKFSALIKWLKG-----TITENLSHFPTIHDGASKFLENFSAA 108 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + ++ R +S G L +F++ LFFF+ G + + L KKI Sbjct: 109 SITGYLLRISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYFLGVLP-LGMNQSKKI 167 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 V ++R L I I EG+ G G LG++ + +++P G + + Sbjct: 168 FEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWS-LGILYGLASLVPAVGGALIW 226 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV--------GGPIKLPFLPTF 313 ++IY L GN+ A + L+ + + ++D ++P L+ +K+ + F Sbjct: 227 IPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIF 286 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++ G+ G G+ +GP + A + + +N +K Sbjct: 287 FSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQKACE 331 >gi|240141410|ref|YP_002965890.1| hypothetical protein MexAM1_META1p5009 [Methylobacterium extorquens AM1] gi|240011387|gb|ACS42613.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens AM1] Length = 677 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 114/357 (31%), Gaps = 24/357 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ II+ L+F + P+ A+++ F P+ + F+ + + F +++ + Sbjct: 30 ASSLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVN-FLRRLKLGRAFAVLVSVLLA 88 Query: 71 MCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGI------PVPRWLSDI--------- 113 + + +++ + V G+ ++++I Sbjct: 89 AGIIAAVTTVIGVQVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQSGE 148 Query: 114 --PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIF 169 ++ S+ ++ + L A+ + Sbjct: 149 ESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATAGI 208 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + L F + +L L + + FLG + G+V+ Sbjct: 209 VFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGVVI 268 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAI 287 G W+ GVPS V G+ +M +P + I L + + L FL A+ Sbjct: 269 GVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLFAL 328 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IV + + P + G + + G +GL + L + V+ + Sbjct: 329 VEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 385 >gi|255280602|ref|ZP_05345157.1| putative membrane protein [Bryantella formatexigens DSM 14469] gi|255269067|gb|EET62272.1| putative membrane protein [Bryantella formatexigens DSM 14469] Length = 381 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 123/345 (35%), Gaps = 9/345 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALII----GFTSWPIYSS--FISKKEESSTFLAVIATVS 69 I + + L L+ A +++AL++ F ++ K+ V++ + Sbjct: 36 IAYAVSWMLDLLEPLLAGMIAALVLNVPLCFIERHLFRKNPTPRKERARRPLAIVLSLIL 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--LSDIPGGMWASELWTKHL 127 V+ +FI + + + + + S VV + S+IP G + S + + Sbjct: 96 VLGIFISVAVLVIPELVNAVAAVSSAVVELLDELAALENSADFSEIPFGEYLSRIDIDWI 155 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L+ + + L + ++ S ++ + +F I L + + + Sbjct: 156 RLRGDLENVLKQ-LGNSILNKAGGAISIAVSSVVNGIVGFVFAIYILANKEKLSRQVRRL 214 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + A ++ + V G T AI G + + +P +G + Sbjct: 215 IRVWLPEKVGAGIIHVASVCGGVFHLFIAGQTTEAIILGTLCTIGMLILRMPYAPMVGAL 274 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ A+IP + +L++ + A ++ + + P +VG + L Sbjct: 275 VSVTALIPYVGGFIAAFIGAFLILTESPVKAVVFVIFFIALQQVEGNLIYPRVVGAKVNL 334 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + + G G +G+ +G +A + KE+ + Sbjct: 335 PSMWVLAAITIGGSLGGPIGMLLGVPTVASAYKLLKEATDKRERR 379 >gi|229139966|ref|ZP_04268530.1| hypothetical protein bcere0013_30720 [Bacillus cereus BDRD-ST26] gi|228643481|gb|EEK99748.1| hypothetical protein bcere0013_30720 [Bacillus cereus BDRD-ST26] Length = 376 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|117928907|ref|YP_873458.1| hypothetical protein Acel_1700 [Acidothermus cellulolyticus 11B] gi|117649370|gb|ABK53472.1| protein of unknown function UPF0118 [Acidothermus cellulolyticus 11B] Length = 429 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 116/353 (32%), Gaps = 20/353 (5%) Query: 14 WMIMFIILVSLYFLKGFF------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 W ++ +V + L+ F P L+A+++ P + +A T Sbjct: 59 WRLLVTGIVGYFLLRFFIRIEIVVLPFLAAMVMTALLRPPCLWLERR--GLPRLIATWVT 116 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + ++ + Y E + V + V WL+ P + ++ L Sbjct: 117 FLLAFIVVLGVGTAVVY--RTTAEWHTLVSDLSATSDKVRHWLATGPLHLKSTNLKDYQQ 174 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +LK + I + I+ FF +G I Sbjct: 175 QFVDALKTHR---------GLVISEVVNGASIAGEVAAGIVLTAFITFFLLYEGERIWTF 225 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +R + + G +IA+ +V+ + + VP L ++ Sbjct: 226 CLIPFRPPTARRVDLAARAAWRTLAGYIRGSVLIALFHAVVIAISLLILHVPLVAPLALV 285 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +P + +S+++ L + L + +E + L+PF++ ++ Sbjct: 286 VFITSFLPLIGVLIGGGLSVFVTLGTQGLTAGIILLIILVVEHQLEGHFLQPFIMSRAVR 345 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L L L G G++G + ++A++ W E +++ Sbjct: 346 LHPLAVALALAAGGVLGGIIGAILAVPVLAMLKSAWPHLWAPGLELPPTVAAE 398 >gi|210134768|ref|YP_002301207.1| outer membrane protein [Helicobacter pylori P12] gi|210132736|gb|ACJ07727.1| outer membrane protein [Helicobacter pylori P12] Length = 348 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 135/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPAIHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|170726523|ref|YP_001760549.1| hypothetical protein Swoo_2171 [Shewanella woodyi ATCC 51908] gi|169811870|gb|ACA86454.1| protein of unknown function UPF0118 [Shewanella woodyi ATCC 51908] Length = 366 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 130/348 (37%), Gaps = 15/348 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 +E +PQ + I+ I +++YF G AP++ ALI+ F WP+ K + T Sbjct: 10 KERFSDPQAVTLVFILLGIALAIYFAGGLLAPLIVALILAFLLEWPVAQML--KIGINRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWA 119 A + V + + ++ L L + L++ + G+ + +++ P + Sbjct: 68 TAASLVLVVFIGVMLLITLGLVPSIWKQGVALITDLPTMLDKGLLTAQTYVNQYPQFVSP 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +L S+ + L T + I + + L + I + + +FFF + Sbjct: 128 EQL--------DSMVAELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILVPLLVFFFLK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + +K+ + + I + G I + G+V + + + Sbjct: 180 DKDQLIKGSKRFIPT-NRELARKVWFEMDQQIFNYIRGKVIEIVIIGVVSYLFFAIMDMR 238 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLR 297 LGV+T +IP GA + +++ + + G + +D L Sbjct: 239 YAALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGFSPEFGYLMLGYGIIQALDGNLLV 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L + L + ++ G+ G+F L +L+ + Sbjct: 299 PLLFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAW 346 >gi|228922070|ref|ZP_04085381.1| hypothetical protein bthur0011_30620 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837678|gb|EEM83008.1| hypothetical protein bthur0011_30620 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 376 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|228901850|ref|ZP_04066020.1| hypothetical protein bthur0014_30340 [Bacillus thuringiensis IBL 4222] gi|228909160|ref|ZP_04072988.1| hypothetical protein bthur0013_33150 [Bacillus thuringiensis IBL 200] gi|228850481|gb|EEM95307.1| hypothetical protein bthur0013_33150 [Bacillus thuringiensis IBL 200] gi|228857791|gb|EEN02281.1| hypothetical protein bthur0014_30340 [Bacillus thuringiensis IBL 4222] Length = 376 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|301307821|ref|ZP_07213777.1| putative membrane protein [Bacteroides sp. 20_3] gi|300834164|gb|EFK64778.1| putative membrane protein [Bacteroides sp. 20_3] Length = 415 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 133/360 (36%), Gaps = 23/360 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ + L+ P L A ++ + P F K S L+++A + Sbjct: 46 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 105 Query: 69 SVMCLFIVPLLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I L+ + E + + + + VP W ++L Sbjct: 106 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVP----------LIPHSWMEYL 155 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-----YCLSIIFMIIALF-FFYRDG 181 + + E K N + + + A + I + + ++I+F+I+ F F D Sbjct: 156 ESNVNFAQIMELLSKENLLKAVKQIAPQLWSILSNTFSILFSITIVFVILLYFIFILLDY 215 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ L + + + ++ V + F G ++IA+ G++L + + P Sbjct: 216 EKIANGWIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLA 275 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA------IELFIVDKT 295 V LG+ ++ +IP I + + L++ ++G I I D Sbjct: 276 VTLGLFIGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLY 335 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G + L L +G +GL I L L +K I+ + Sbjct: 336 LTPRIMGKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEDNELDP 395 >gi|289450334|ref|YP_003475067.1| hypothetical protein HMPREF0868_0750 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184881|gb|ADC91306.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 467 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 99/295 (33%), Gaps = 13/295 (4%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V A ++V+ LF++P++ ++ +K + + + E Sbjct: 101 VFAMMAVVALFVIPVVAETISELISGIPAFAKRLEFKVNELATNN--------PRIVETL 152 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L + ++T + + G + + + ++ + + Sbjct: 153 ETLQIDWRELTEQAVGLMRTQAAGLL-KHILSAGSDLVSGLTTFLVALVLAIYILSSKEN 211 Query: 184 ISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q+ L L + ++ + G + A GL + +P Sbjct: 212 LQRQMLKLLRALASDKRYDSILSVFKLANATFSAYVSGQFLEACLLGLATYIGMTILKLP 271 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ I AMIP AV L + + A F++ + I + P Sbjct: 272 FSGLIGVVVTIFAMIPIVGSFISVAVGTLLTVIEDPGKALIFFIFFIVLQQIEGNFIYPH 331 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +VG +KL L + G G+ G+ + +++ + + + KE Sbjct: 332 VVGKSVKLSGLWVLVAISIGGSLGGIAGILVSIPTFSVLYSLIGQWVNRCLLRKE 386 >gi|83589888|ref|YP_429897.1| hypothetical protein Moth_1040 [Moorella thermoacetica ATCC 39073] gi|83572802|gb|ABC19354.1| Protein of unknown function UPF0118 [Moorella thermoacetica ATCC 39073] Length = 366 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 119/319 (37%), Gaps = 4/319 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L P A ++ P + K + + + + V+ + V L +L + Sbjct: 43 LVPIVLPFALAALLAAIIDPAVNLLEKKLKIGRGWAVITTLLLVLAIMGVALFYLLANLI 102 Query: 87 LEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +E++ LV + A G + + + G + L L QSL + LK Sbjct: 103 IELESLVLNLPAQARSLGALLQEYFYRLQGFYFGGNLPPNILISFQSLFNNAVNVLKGFL 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + D+ + +I ++A +FF RD I + L + + ++ Sbjct: 163 TQTVQGLV-IIVSSLPDFFIFVIITLVATYFFSRDKELILRTLLRVMPAGWRERTSRVFS 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + I ++ + + V + L + + ++P G F Sbjct: 222 SLGQAIIGYLRAEILLISLQMTQSVLGLLILKVDYALTLAFLIGLADLLPIVGPGTVFIP 281 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I I G+ L + A + I+ + L+P LV + L L T L G++ +G Sbjct: 282 WIIIEFILGHYGLGLALLILYAFII-ILRQVLQPKLVAVNLGLYPLTTLIVLYAGLKLLG 340 Query: 325 LLGLFIGPVLMALIAVIWK 343 ++GL +GP+ + ++ ++ Sbjct: 341 VVGLALGPLTIVVLKAFFR 359 >gi|150396017|ref|YP_001326484.1| hypothetical protein Smed_0793 [Sinorhizobium medicae WSM419] gi|150027532|gb|ABR59649.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 379 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 105/325 (32%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ + L P L+ + + + P+ + + + Sbjct: 18 LQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLE-RLGLNRLMATIA 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + + + L+ + + E + K+ W + Sbjct: 77 ILVAFVVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTDSQTTLLPDWLAGQMAT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L +FL + + + GM L+ + + F+ D + Sbjct: 137 IKQNSAKLLEQGASFLGS-----LFQQIWNSGMALLNILSLFVITPVVAFYLLLDWDRMV 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + ++I+R + I G + + GL L G+ + +G Sbjct: 192 DRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLTLVGLNFGLLIG 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + + F+ L+P LVG Sbjct: 252 LFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFLEGNILQPKLVG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L+ G +G Sbjct: 312 RSVGLHPVWLMFALLAFGALFGFVG 336 >gi|315149437|gb|EFT93453.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 404 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 63 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 121 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 122 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 175 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 176 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLG 235 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 236 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVHYAFLFGVIAGFTNLIPYLGPYLGLAP 295 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 296 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 355 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +K + + +N Sbjct: 356 LGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 389 >gi|282854475|ref|ZP_06263812.1| putative membrane protein [Propionibacterium acnes J139] gi|282583928|gb|EFB89308.1| putative membrane protein [Propionibacterium acnes J139] Length = 408 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 86 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 144 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 145 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 192 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 193 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 252 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 253 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 312 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 313 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 372 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ S + Sbjct: 373 AIPIVAFGVAFIKALNPETPANEVPPSHD 401 >gi|30021450|ref|NP_833081.1| hypothetical protein BC3342 [Bacillus cereus ATCC 14579] gi|206969183|ref|ZP_03230138.1| putative membrane protein [Bacillus cereus AH1134] gi|218234805|ref|YP_002368060.1| hypothetical protein BCB4264_A3355 [Bacillus cereus B4264] gi|296503859|ref|YP_003665559.1| hypothetical protein BMB171_C3029 [Bacillus thuringiensis BMB171] gi|29897004|gb|AAP10282.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206736224|gb|EDZ53382.1| putative membrane protein [Bacillus cereus AH1134] gi|218162762|gb|ACK62754.1| putative membrane protein [Bacillus cereus B4264] gi|296324911|gb|ADH07839.1| hypothetical protein BMB171_C3029 [Bacillus thuringiensis BMB171] Length = 373 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 100 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|295397298|ref|ZP_06807392.1| protein of hypothetical function UPF0118 [Aerococcus viridans ATCC 11563] gi|294974449|gb|EFG50182.1| protein of hypothetical function UPF0118 [Aerococcus viridans ATCC 11563] Length = 406 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 131/371 (35%), Gaps = 28/371 (7%) Query: 11 IMRWMIMFIILVSLYF-----LKGFFAPVLSALIIGFTSWPIYSSFISKK---------E 56 ++ I+ +I S + P++ ++ F + + + Sbjct: 17 LIAVFILVVINWSYLVQTVFMIWSVIFPLILGGMVAFVLNLLMTWLEKYLYPKATNKYIK 76 Query: 57 ESSTFLAVIATVSVMCLFIVP--------LLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 S +A+I + ++CL I L + + E V + + Sbjct: 77 GSRRPVAIILAILIVCLVIAATVVIVVPQLASAVMTLIDVIPETVQNLTDWFNRQEALVP 136 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 ++++ + W S S + + T + + IF L I+ Sbjct: 137 LVNEL--ANQVNIDWGSMFSSVASGINSLASNVATTSVSVLTTSVGAVTNIF----LGIL 190 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F I LF + + + L + ++R+ + GM I +I G + Sbjct: 191 FAIYILFSKEKLAKQVDRLLTVYVRDDIHQLIENVARVANETFAKFISGMVIESIILGTL 250 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + ++ VP LGV+ +MA+IP AV + +L+ N A ++ Sbjct: 251 VTVGLFILQVPYAAMLGVLQGVMALIPIIGAFLSGAVGVLILLALNPTYALIYLIFVLFV 310 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + P +VG I LP + F + G MG+ G+ IG ++A I I K + Sbjct: 311 QQLEGDLIYPRVVGDSIGLPSMWVLFAVTVGGGLMGIPGMLIGVPVLASIYKIIKIDVKY 370 Query: 349 IKENKEKISSN 359 ++ +++ Sbjct: 371 REQVRQETGEQ 381 >gi|319898869|ref|YP_004158962.1| permease protein [Bartonella clarridgeiae 73] gi|319402833|emb|CBI76384.1| permease protein [Bartonella clarridgeiae 73] Length = 385 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 107/319 (33%), Gaps = 13/319 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ +++ + PI F K F V+ T+ ++ +F+V L+ L +++ Sbjct: 52 LFPFIAGIVLAYFLNPIVQVFE-KIGIHRVFGTVLITLFIIVIFVVALIILIPIVSGQIQ 110 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG--IDF 148 + VS + + + + + S P L + L + I Sbjct: 111 KFVSNGLPIYVNR------IQNFFIEHNFDWVRRYFDSDPNELHTNIKALLGQSSDFITS 164 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + G ++ + + F+ D + + +DS + + + Sbjct: 165 LLNSLLKSGKSIVNIISLFVVTPVVTFYILLDWPHMVEAVDSWIPRSHLTTVRSLFHEMD 224 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + G + + G+ + +G+ +++ IP + +SI Sbjct: 225 RAVAGFVRGQGTACLILAGYYAIGLTITGLNFALLIGMFVGLISFIPYIGTMIGFVLSIG 284 Query: 269 LLI----KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + I FI L+P LVG + L + F L G Sbjct: 285 VAWVQFYPNYWEWIVIVMAVFFIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFGSLFG 344 Query: 325 LLGLFIGPVLMALIAVIWK 343 G+ + A++ V+ + Sbjct: 345 FTGMLVAVPAAAIVGVLVR 363 >gi|229162237|ref|ZP_04290206.1| hypothetical protein bcere0009_30140 [Bacillus cereus R309803] gi|228621287|gb|EEK78144.1| hypothetical protein bcere0009_30140 [Bacillus cereus R309803] Length = 376 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYIIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ V R G ++L+ + + Sbjct: 103 FLVVTVIPIIRDQIDALIKNVPYFGHEIERAARRF----GESNVLGKIQENLNIDVASIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T I + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVNFTKSISSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAKNILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + + + + I K + P ++G + + + F Sbjct: 279 YVGPVIAITPALIIAFIDSPAMVLKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|50842045|ref|YP_055272.1| membrane spanning protein [Propionibacterium acnes KPA171202] gi|289425855|ref|ZP_06427609.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289426791|ref|ZP_06428519.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|295130127|ref|YP_003580790.1| hypothetical protein HMPREF0675_3618 [Propionibacterium acnes SK137] gi|50839647|gb|AAT82314.1| membrane spanning protein [Propionibacterium acnes KPA171202] gi|289153798|gb|EFD02505.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289160117|gb|EFD08293.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|291375147|gb|ADD99001.1| conserved hypothetical protein [Propionibacterium acnes SK137] Length = 408 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 86 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 144 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 145 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 192 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 193 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 252 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 253 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 312 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 313 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 372 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 373 AIPIVAFGVAFIKALNPETPANEVPPNHD 401 >gi|218282593|ref|ZP_03488831.1| hypothetical protein EUBIFOR_01413 [Eubacterium biforme DSM 3989] gi|218216464|gb|EEC90002.1| hypothetical protein EUBIFOR_01413 [Eubacterium biforme DSM 3989] Length = 397 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 131/376 (34%), Gaps = 32/376 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILV--------SLYFLKGFFAPVLSALIIGFTSWPIYSSFI 52 M++ ++ + I+F ++ S+ F+ P L + + F Sbjct: 21 MKQRIIVYSASLIIAILFFTILNRFKDITRSIQFIITILFPFLLGIGLAFILNNPQKWVE 80 Query: 53 SKK--------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 +K + I + + I+ + + +++ V + I Sbjct: 81 NKLLANTPMQNKHKRILSTGIVFILTIGFLILFFSIIIPNTIDSVRQFSKNVASYSDTLI 140 Query: 105 -PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + E + + + + IP+ AS + F+ Sbjct: 141 GYTKDFAYKLNISEKQVEQLLINFD--------ITKKITSVLTESIPKIAS-YSYSFVKG 191 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMT 219 ++II +++ F+ D ++ + + L LF + + ++ F +G Sbjct: 192 FINIILALVSAFYILLDRETLVKGIKKLNYSLFDKNFANYLTLWTNDAKTVFEQYIVGNI 251 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNA 278 I + G++ + +P + +I + +IP G + V I L + + F+A Sbjct: 252 IDSFIVGVICYFGALVLKLPYASMIALIIGVTNVIPVFGPFLGAIPVIIILCLI-DPFSA 310 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ I ++P ++G + + F + G G++G+F+G + ALI Sbjct: 311 LIFTIFIFILQQCDGNIIKPIVLGDKLGMSGFWILFSVTVGGALFGVVGMFLGVPIFALI 370 Query: 339 AVIWKESIMAIKENKE 354 + I NK+ Sbjct: 371 YAGVHDYIQVRLRNKK 386 >gi|30263317|ref|NP_845694.1| hypothetical protein BA_3410 [Bacillus anthracis str. Ames] gi|49186166|ref|YP_029418.1| hypothetical protein BAS3161 [Bacillus anthracis str. Sterne] gi|49479012|ref|YP_037468.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|50196948|ref|YP_052638.1| hypothetical protein GBAA_3410 [Bacillus anthracis str. 'Ames Ancestor'] gi|118478647|ref|YP_895798.1| permease [Bacillus thuringiensis str. Al Hakam] gi|228915962|ref|ZP_04079537.1| hypothetical protein bthur0012_31800 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928408|ref|ZP_04091449.1| hypothetical protein bthur0010_31070 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228934640|ref|ZP_04097474.1| hypothetical protein bthur0009_30950 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228946985|ref|ZP_04109282.1| hypothetical protein bthur0007_31160 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092314|ref|ZP_04223486.1| hypothetical protein bcere0021_30950 [Bacillus cereus Rock3-42] gi|229122890|ref|ZP_04252098.1| hypothetical protein bcere0016_31810 [Bacillus cereus 95/8201] gi|229185596|ref|ZP_04312775.1| hypothetical protein bcere0004_31480 [Bacillus cereus BGSC 6E1] gi|30257951|gb|AAP27180.1| putative membrane protein [Bacillus anthracis str. Ames] gi|49180093|gb|AAT55469.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49330568|gb|AAT61214.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|50083010|gb|AAT70146.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|118417872|gb|ABK86291.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|228597826|gb|EEK55467.1| hypothetical protein bcere0004_31480 [Bacillus cereus BGSC 6E1] gi|228660474|gb|EEL16106.1| hypothetical protein bcere0016_31810 [Bacillus cereus 95/8201] gi|228691016|gb|EEL44783.1| hypothetical protein bcere0021_30950 [Bacillus cereus Rock3-42] gi|228812717|gb|EEM59041.1| hypothetical protein bthur0007_31160 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228825033|gb|EEM70831.1| hypothetical protein bthur0009_30950 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228831455|gb|EEM77051.1| hypothetical protein bthur0010_31070 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843780|gb|EEM88854.1| hypothetical protein bthur0012_31800 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 376 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|308174441|ref|YP_003921146.1| permease [Bacillus amyloliquefaciens DSM 7] gi|307607305|emb|CBI43676.1| putative permease [Bacillus amyloliquefaciens DSM 7] Length = 353 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 112/318 (35%), Gaps = 15/318 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +K F P+ A+ I + PI K T+S++ ++ + + + Sbjct: 37 LVMKSLFIPIFIAVFIAYLLLPITDWLHGKGMPR--------TLSLLLIYFLFFGGIGWG 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L+ ++ ++ + + + L P + + ++ Sbjct: 89 VYKGVPVLIEQLQDLSESIPGLAENYNSM-----LRHLHNHTDHWPDGMHHRMDKMIQQT 143 Query: 145 GIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 S I LDY L + +F+ +D + + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVLDYILIAATIPFLVFYMVKDIDVMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ G + G ++WL G+P + LG+ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGFIAGVSFWLFGLPYPLILGLAIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPALLLSLAISSKAVIIVIVTIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAV 340 G+ G+ + A++ V Sbjct: 324 AGIPGMILAVPAAAVLKV 341 >gi|221635410|ref|YP_002523286.1| hypothetical protein trd_A0004 [Thermomicrobium roseum DSM 5159] gi|221157285|gb|ACM06403.1| protein of unknown function [Thermomicrobium roseum DSM 5159] Length = 487 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 119/346 (34%), Gaps = 25/346 (7%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L L P + A + + P+ + + ++ + ++ L ++ L L Sbjct: 26 WALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLRLPRIAVVLVLYLVLIGLLVLGGLLL 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + L + V + ++ G A + + + L+E F Sbjct: 86 APSLAQQAQALATTVPRVIETIEQRLARAPELRFGELAIDTRGLLDRLDAAAQSLAERFS 145 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++ + + F+ G ++ +L +L Sbjct: 146 REAVPLVLA---------TVEALIKSFVFFLVSFYGLLQGRTLVARLRALAPRRHQKTVS 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I V R+ ++ A + V +AL + T ++ +IP P Sbjct: 197 RILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALAIATGLLELIPFIGP-- 254 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAI------------ELFIVDKTLRPFLVGGPIKLPF 309 +TA +I + + T F W ++ + D + P LVG ++L Sbjct: 255 WTAGAI--AVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVIPQLVGHFVRLHP 312 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FG++ G G+LGL + ++A + ++ + ++ + Sbjct: 313 VVVLFGILAGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPR 358 >gi|167038699|ref|YP_001661684.1| hypothetical protein Teth514_0024 [Thermoanaerobacter sp. X514] gi|307723242|ref|YP_003902993.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X513] gi|166852939|gb|ABY91348.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X514] gi|307580303|gb|ADN53702.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X513] Length = 355 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 123/350 (35%), Gaps = 7/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWA 119 + I + ++ + + + E+ L AN + + I Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDAILNLVDRI---RTY 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +++ + S + + + F ++ + ++A FF + Sbjct: 123 YISLPPNITSLIESNMHSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + + + K I + K + I + L + + G Sbjct: 183 DKNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVIIGFD 242 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 LG+ I+ +P G+ ++Y ++I N L + + + +V + + Sbjct: 243 YPFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVV-VVRQMIE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 302 PKIVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 351 >gi|72535366|gb|AAT67989.2| permease protein [Halobacterium sp. AS7092] Length = 322 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 113/299 (37%), Gaps = 29/299 (9%) Query: 45 WPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ + + E + A + P++ Y+ + ++ + Sbjct: 1 MPVQGWLVRRGLSEWTGALAATVVGFVAAIAVFAPIVVALYFRIEQVLDA---------- 50 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + +P + + L H ++ +D++ A+ F + Sbjct: 51 -------VEALPRELSVTVLEATHTVEAGE--------IQALAVDYLSDAATSFALALPV 95 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + I+ +F G + + H + +++ + + + ++ + Sbjct: 96 LGIKFALFIVLMFGLLLKGDEAGRAAVAPIPHDYRDVVYALTKRARETLYAIYVLQVATS 155 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL 281 I LV + L G + + L ++ A++ +P G + +++Y + G++ AT + Sbjct: 156 IATLLVAYPLFRLLGYEAALTLSIMAAVLQFVPIIGPSMLIAPITLYHVAVGDLVAATLI 215 Query: 282 FLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + G + + + D +RP L LP F G GG+ T+G +G+ +GP+++A+ Sbjct: 216 GVLGLVFVAWLPDIAVRPRLSRRSAGLPGSLYFVGFTGGLFTLGPIGIVVGPLIVAVFV 274 >gi|311278603|ref|YP_003940834.1| hypothetical protein Entcl_1284 [Enterobacter cloacae SCF1] gi|308747798|gb|ADO47550.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 349 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 116/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP Sbjct: 5 RRRFSDPEAIALLVILLAGFGILFFFSGLLAPLLVAIVLAYLLEWP-TIRLERIGCSRRW 63 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 64 ATSIVLILFVGILLLMAFVVMPVAWQQGINLIRDMPGMLNKLSDFAATLPRRYPALMDAG 123 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 124 IIDAMADNMRNRMLTMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 175 KEQMLNAVRRILPRNRGLAG-QVWKEMNQQITNYIRGKVLEMVVVGVATWIGFLLFGLNY 233 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ + +IP GA + V + L G LF I + L P Sbjct: 234 SLLLAVLVGLSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSLFAVYLIIQGLDGNLLVP 293 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 294 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 340 >gi|227517666|ref|ZP_03947715.1| possible permease [Enterococcus faecalis TX0104] gi|227074875|gb|EEI12838.1| possible permease [Enterococcus faecalis TX0104] Length = 404 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 114/334 (34%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 63 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 121 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 122 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 175 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 176 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLG 235 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 236 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 295 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I AT L + + + P ++G +K+ L L+ GL Sbjct: 296 AVLVTIFNEPVKATLCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 355 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +K + + +N Sbjct: 356 LGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 389 >gi|330993492|ref|ZP_08317427.1| UPF0118 membrane protein yrrI [Gluconacetobacter sp. SXCC-1] gi|329759522|gb|EGG76031.1| UPF0118 membrane protein yrrI [Gluconacetobacter sp. SXCC-1] Length = 374 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 112/340 (32%), Gaps = 10/340 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + I+++ ++ + + +A ++ + + +V+ + Sbjct: 43 TLAITIVVMLIWVVGDVLMVIFAATLVAVILHNLAGIVERRTHMPYWLA----LGAVVVV 98 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I L L + E+ E A + + ++ GM S L + + Sbjct: 99 LIGALTGLIWSSGPEISE------QAVKLRTALSEQAHNLRNGMGDSSTGRMILDNLPTT 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +E +G + + F ++ ++IA +F + + Sbjct: 153 LGGNEATSGNSGFGSLAGSMTGFVSSAFGAAGTLAVILIAGLYFAISPELYVNGMLRMVP 212 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 H + +++ + + + G + GL+ W GVP +ALGV+ + Sbjct: 213 HPYRMTARELLLTAGRTLWAWTAGQALDMTVVGLLSFIGLWCIGVPLALALGVVAGLANF 272 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP ++ + + + A F + P + +++P T Sbjct: 273 IPYIGAFVGAVPAVLIALSQGTREGFMVMGLYAAIQFFEGNVMAPLIQRHAVQMPPGLTI 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ GL + L A + + + +KE++ Sbjct: 333 LSQTIFGTILGIPGLILASPLTAALLAVADRATPELKEDE 372 >gi|329935266|ref|ZP_08285232.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329305089|gb|EGG48948.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 521 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 106/309 (34%), Gaps = 23/309 (7%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V ++AL+I P + ++ LA T Sbjct: 173 LLVLAGTVWVLMRVISAVRLVVLAFVAALLITAILQPTVARL--RRHGVPRGLATALTAV 230 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLS 128 + + + + ++ ++ E + + Q GI R WL + P + Sbjct: 231 LGFVV---MGLIGWFVTWQVMENIDNLSDQIQDGIDDLRRWLLNSP--------FHVTDK 279 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + N + ++ I+ + + F DG I + Sbjct: 280 QINAIAKNLREAIGANTDQITSAGLEGV-TVIVEGLTGILLTVFSTLFLLYDGRRIWEWS 338 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 339 LKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLEVPMAVPLAVFI 398 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + A+++ + L+ +F A + I L+PF++G +++ Sbjct: 399 FLFAFIPLVGAVVSGALAVVVALVTQGVFAAVMTLVVVLAVQQIEGHILQPFILGRAVRV 458 Query: 308 PFLPTFFGL 316 L + Sbjct: 459 HPLAVVLSV 467 >gi|160915476|ref|ZP_02077687.1| hypothetical protein EUBDOL_01484 [Eubacterium dolichum DSM 3991] gi|158432596|gb|EDP10885.1| hypothetical protein EUBDOL_01484 [Eubacterium dolichum DSM 3991] Length = 390 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 117/337 (34%), Gaps = 22/337 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFLF 82 P + I F F +K A+++ V + + L L Sbjct: 43 LMPFILGFAIAFILNGPMMFFEAKLFGKLRCSKQVKRNLSALLSLVLFIAIVCFLLALLI 102 Query: 83 YYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + LV A + ++ + E+ K +S + L+E Sbjct: 103 PQLVESIASLVKSFPGYAADFQVFAIDFMKE---HDINVEIINKFISDYNIVGKLTEFV- 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ + + + + G L+ L II+ + D + + L +FP Sbjct: 159 -TSALPQMAKLTYQLGSTLLNVLLG----IISGLYMMMDKERLLRYFKKLNYAIFPKNVA 213 Query: 202 KISRIV----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + ++ + +G I ++ G++ L G P + L V+ + MIP Sbjct: 214 EYTHRLMLSSSQIFNNFIIGKAIDSLIIGILCYVGSILLGFPYAILLSVVVGVTNMIPVF 273 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I LL + A L+ + L P ++G + LP + F +V Sbjct: 274 GPFIGAIPGIVLLFIIHPITAVYYALFILVLQQFDGNILGPLILGDKLGLPSIGILFSVV 333 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G ++G+FIG A+I + +E E + Sbjct: 334 IGGGLFNVVGMFIGVPCFAVIYMAVREWTHYRLEKRH 370 >gi|326692552|ref|ZP_08229557.1| transport protein [Leuconostoc argentinum KCTC 3773] Length = 382 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 115/336 (34%), Gaps = 14/336 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P+ + ++++ L + L ++ Sbjct: 52 APILIAGVLYYLLSPLVKLLTRYTHIPRALAIGLILIAIIGLAAGLITMLVVVLRFQVMT 111 Query: 92 LV-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + + L T + Q++ S+ +L T Sbjct: 112 FIDNWPSYWHTSQNFINETFKSSQFKPVREFLNTTNTGINQNVIDWSKKYLTTGVAGI-- 169 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S ++ + L++ DG S + +++ + K Sbjct: 170 ---SSLASTLTSVGITAVSTPFILYYMLLDGHKFSGFVAEKFPPKAQHSLRELLTDISKQ 226 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G + + ++ G Y + G+P + L ++ MIP G+ ++ V I Sbjct: 227 IAKYIRGQLGVGLAVMIMFGIGYTVIGLPYGILLAMMAGFFNMIPYVGSILAQVPVFIVA 286 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI G + + IE I + P ++G + + + L+ G G+LG+ Sbjct: 287 LIAGGPKLLILVIIVLVIEQPIEGHVIAPKILGDALAIHPVTVIVVLLTGAHIFGVLGVI 346 Query: 330 IGPVLMALIAVI-------WKESIMAIKENKEKISS 358 +G A++ V+ W+ + KE E++ Sbjct: 347 LGVPTYAVLKVLVTRIYTWWRSNSALFKEGTEEVEQ 382 >gi|206974666|ref|ZP_03235582.1| YubA [Bacillus cereus H3081.97] gi|206747309|gb|EDZ58700.1| YubA [Bacillus cereus H3081.97] Length = 373 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 100 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|325568894|ref|ZP_08145187.1| protein of hypothetical function UPF0118 [Enterococcus casseliflavus ATCC 12755] gi|325157932|gb|EGC70088.1| protein of hypothetical function UPF0118 [Enterococcus casseliflavus ATCC 12755] Length = 447 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 113/341 (33%), Gaps = 7/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ SKK S +A I + ++ + Sbjct: 83 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLESKKIPRSVSIAGIYLLILLLIVF 142 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + S L + +L + P +++ + ++ Sbjct: 143 AGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIMS 202 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + +T S +++ I FF R+ + SL Sbjct: 203 FIGDYWQTGAAGL-----SSLFSTISTLFIALFTGPIIAFFLLRNPNKFYFSVLSLVPPR 257 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 258 FRKDFNEIVKISDIQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 317 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I F L W A++L D + P ++G +K+ + Sbjct: 318 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVV-PRVMGDRLKIHPITILV 376 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ MG++G+ G + L+ V+ K+ + Sbjct: 377 VLLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQRYNR 417 >gi|260662858|ref|ZP_05863752.1| permease [Lactobacillus fermentum 28-3-CHN] gi|260552939|gb|EEX25938.1| permease [Lactobacillus fermentum 28-3-CHN] Length = 354 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 117/328 (35%), Gaps = 10/328 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 15 FVFTPLLVFVSVVITPLIISLFLYYMLKPLFRLLMKIKVYKWHMKRGIASLVVVIGLVLI 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ +++ + A + + + +S+ P ++ + Sbjct: 75 VAGGISALIPSVLNELNQVIHWLPQAAKESQKMIQEISEHPWVRKL-----HLSTYYSQI 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ + G I ++I + LF+ ++DG + + L Sbjct: 130 NDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITV-PVMLFYMFKDGNRLVPSVQKLFP 188 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + + + S G I + + Y + G P V LGV+ I M Sbjct: 189 ENSRDEVGELLRKMSQTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANM 248 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + I I + P ++G +++ L Sbjct: 249 IPYVGPYIGITPSLMVSIAVAPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 308 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ G+ G+ + A++ + Sbjct: 309 MLLLAAGNIAGIPGMILCIPCYAVVKTV 336 >gi|222479132|ref|YP_002565369.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452034|gb|ACM56299.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 368 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 120/358 (33%), Gaps = 41/358 (11%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + + F AP+ A+ + +++ ++ + + Sbjct: 1 MDEKRFVIALFGLAVGALVGFIAYRFVAPLTVAVFLYYSTRRLFHRLERFRLPARVRA-- 58 Query: 65 IATVSVMCLFIVPLLFLFYY----GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +S + L VPL+ L Y ++E + + + +A G W Sbjct: 59 ---MSALSLIAVPLIGLLSYTMLLLVIEARRFIEQYPVAETVGA----------ENSWVG 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + E+ I+F A+ LS++ I+ ++ D Sbjct: 106 DLAELSNPTFDGIMQAYESGQLDPLINFASEQATLLASTLSGLVLSLLITIVVTYYLLLD 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW------ 234 G + L + + ++ V + + G + I ++ AY Sbjct: 166 GSKFHEWLLTFDDDAV---VREYLEAVDAELEAVLYGNLLNVIAISIIAVVAYTGYNVIA 222 Query: 235 --LAGVPSHVALGVITAIMAMIPGG---------APISFTAVSIYLLIKGNIFNATCLFL 283 L VP G +T + ++IP A ++ ++ I ++ A L L Sbjct: 223 PELVEVPYPALAGALTGVASLIPVIGMKIVYLPLAAVTAVPAALGDEISALVYVAGFLVL 282 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I D LRP+ G + G G GLF+ P+++ L Sbjct: 283 AAIVVDTIPDIVLRPYFSGKTT--HVGLLMLAYIFGPVVFGFHGLFLAPIVLVLALTF 338 >gi|199596913|ref|ZP_03210346.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229553740|ref|ZP_04442465.1| permease [Lactobacillus rhamnosus LMS2-1] gi|258507710|ref|YP_003170461.1| membrane protein [Lactobacillus rhamnosus GG] gi|258538898|ref|YP_003173397.1| membrane protein [Lactobacillus rhamnosus Lc 705] gi|199592046|gb|EDZ00120.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229312911|gb|EEN78884.1| permease [Lactobacillus rhamnosus LMS2-1] gi|257147637|emb|CAR86610.1| Conserved membrane protein [Lactobacillus rhamnosus GG] gi|257150574|emb|CAR89546.1| Conserved membrane protein [Lactobacillus rhamnosus Lc 705] gi|259649057|dbj|BAI41219.1| putative transporter protein [Lactobacillus rhamnosus GG] Length = 388 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 119/323 (36%), Gaps = 12/323 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P + A I+ + + PI + K + + ++ L + LL ++ Sbjct: 53 PPFIFAGILFYLTVPIINRLE-KAGLHRGLAIGLLFIVLISLLVWGLLRFIPAVSNQITS 111 Query: 92 LVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +V A Q + +WL D+ + + + + Q+ + T I + Sbjct: 112 IVD---SAPQIFTEIGKWLDDLNDKQNILSQHDLNEIANEVQTFFTGKQGAFVTGTISQL 168 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G + ++I I LFF +DG + + + K++ + + Sbjct: 169 QNLIGIVG----NVVVTISTAPIILFFMLKDGDKFTPMILQIVPTKLRRSVKQMLHEMNE 224 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + S G +A+ ++ Y + G+ + G++ + +IP G+ ++ I Sbjct: 225 KVGSYVQGQITVALCVAVMFMIGYSVIGLRYGLIFGLLACPLNLIPYFGSALAMIPPLIM 284 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + + IE I + + P ++G ++L + L+ GL+G+ Sbjct: 285 GALT-SPRMILAVIVVFFIEWLIETQLISPLVMGSKLELHPITIVVVLLTAGNLFGLVGV 343 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 +G A++ ++ ++ Sbjct: 344 ILGIPGFAVLKIVVTRFFSWYQQ 366 >gi|294815484|ref|ZP_06774127.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294328083|gb|EFG09726.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 471 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 101/320 (31%), Gaps = 14/320 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A I P + ++ + ++ + ++ L ++ +V Sbjct: 121 AFFIALAIEPAVARMAAR-GVRRGLATFLVFFGLLSAAVGFVVMLGSMLADQIVTMVEDF 179 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q+ V W++ + +EL + +++++ + + A+ Sbjct: 180 P---QYLDSVISWINQ----TFETELSRVEVQDSVLRSDWLQSYVEDSATGVLDVSATVL 232 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G +F F+F DG + + + S+ A + I Sbjct: 233 G-GLFRLLTIFLFS----FYFAADGPRLRRTICSVLPPAKQAEVLRAWEIAVDKTGGYIY 287 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 ++A+ G + GVP AL V +++ IP A+ + + N Sbjct: 288 SRGLMALISGGAHYVLLEVLGVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNP 347 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + + + L+P L + + F ++ G MG +G I + Sbjct: 348 WYAVWVLGFVVVYQQFENYVLQPKLTARTVDIHPAVAFGSVIAGTALMGAVGALIAIPAV 407 Query: 336 ALIAVIWKESIMAIKENKEK 355 A + + + Sbjct: 408 ATLQAFLGAYVRRYDVTDDP 427 >gi|317129668|ref|YP_004095950.1| hypothetical protein Bcell_2969 [Bacillus cellulosilyticus DSM 2522] gi|315474616|gb|ADU31219.1| protein of unknown function UPF0118 [Bacillus cellulosilyticus DSM 2522] Length = 373 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 127/333 (38%), Gaps = 5/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F++ F P L A ++ + PI ++K +A++ ++ + L+FL Sbjct: 36 FVQTVFIPFLIAGVLFYLLRPILIFLHNRKV--PKVIAILIIYVLLIGVLTGLVFLIGPA 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + +L++ + V + + D+ W ++ +S+ L + Sbjct: 94 LQ--AQLMNLIDNMPFLVNEVRKVIFDLSEIEWLAQFQDFESFSIESISENIAGVL-MDT 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +FI + F + +II + LF+ +DG Q+ K+I Sbjct: 151 FNFISMNIASFLGALTNTLFTIILIPFMLFYILKDGHKAPNQVLRFFPEKQQIEGKRILS 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + S G I+++ G+++ +Y + G+ + L +I +IP P Sbjct: 211 DMDKALSSFIQGQIIVSLCVGILMFISYTIIGLEYTLILALIAMATNLIPFIGPWIGAVP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + + I + P ++G + + L ++ R G Sbjct: 271 AVIVALIASPMTALWVIVAIVVVQQIESNLIAPQVMGRKLAIHPLTIIILILVAGRFAGF 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G I A+ V+ + +K K+ + Sbjct: 331 IGFLIAVPTYAVTKVVVSHTYRLLKLRKQNLEE 363 >gi|18977957|ref|NP_579314.1| hypothetical protein PF1585 [Pyrococcus furiosus DSM 3638] gi|18893731|gb|AAL81709.1| hypothetical protein PF1585 [Pyrococcus furiosus DSM 3638] Length = 341 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 126/358 (35%), Gaps = 28/358 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + +++ I+ + +K P++ L + ++P K E L V Sbjct: 1 MEREKIFWIAVVLLILFLVWETIKYLITPIVFGLAGTYIAYPFQRKLSKKVGEKKATLIV 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +A V+V+ + + L+ L+ L G+ +P +L + Sbjct: 61 LAIVAVLSTLFLIGVTLWITDTLKNLYLYLDRFFIWLSGLNMPSFLGALFDA-------- 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + ++ + L +I + + + + Sbjct: 113 ----------------LAQSFPEKLRSILLQYTLSLPKLALQLIVFLAVFYSSLLNADFL 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---SH 241 S+++ +L KK+ + + + + + L +++ + Sbjct: 157 SKEIYTLLPSSNNELGKKLIEKTRDTLDAILKTWLFFSAAKAIFLALGFYIFDISNVGGS 216 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFL 300 +A G++ I+ ++P V +L + +I A L+G + + D ++P L Sbjct: 217 IAAGILCMILELLPVLGGWIMWIVGAIILWQKSIMLAILFALYGILTVSPFPDYFIKPRL 276 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 V + + G+ GG+ G +G+ +GP+ + L + + + + + S Sbjct: 277 VRNRASVSSVVALVGIFGGIMAFGAVGILLGPISIGLFSALLEAWKEIEERETTQPSK 334 >gi|257899624|ref|ZP_05679277.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|293570808|ref|ZP_06681855.1| transport protein [Enterococcus faecium E980] gi|257837536|gb|EEV62610.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|291609076|gb|EFF38351.1| transport protein [Enterococcus faecium E980] Length = 379 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 15/320 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L A I + PI + + F+V ++ + Sbjct: 40 MLSAIFLPLLVAGFIYYMFDPIVVFLEKHRIPR--------VFGFLLTFLVVIILVVLTV 91 Query: 86 MLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +LV + + Q WL+++ E +L + LS + L Sbjct: 92 MNVVPQLVEQTIQLTQSLPIYADETSKWLNEL---AQREEFKNFNLEEQLASANLSLSNL 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++ + + + + + L F ++DG L + Sbjct: 149 FNIILVSLSASVTKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELR 208 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + + A+ G++ A + P + L VI I +IP P Sbjct: 209 QTVKELNETLSAYISSTILDALIIGVMSFLAMRIFNQPYSLLLAVICGITNIIPYVGPFI 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I + + + F A + L + + ++P L G + + L L+G Sbjct: 269 GAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGS 328 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ I + A+I I Sbjct: 329 VAGILGMLICIPVYAVIKTI 348 >gi|302527288|ref|ZP_07279630.1| predicted protein [Streptomyces sp. AA4] gi|302436183|gb|EFL07999.1| predicted protein [Streptomyces sp. AA4] Length = 405 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 120/350 (34%), Gaps = 20/350 (5%) Query: 13 RWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R++I+ +L + G+ P+ AL++ P+ + + Sbjct: 36 RFLIVLTMLGVAAWTLGYLSAVTVPIGIALLLSALFAPLVERLVRWHVPRA--------- 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ L G + + + Q G V L+ I + L L Sbjct: 87 --LATLVAIIVGLAVLGGVLTLVVTTVTASLPQLGNQVGASLARINNWLQHGPLHLPQLQ 144 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A+ G + + L++ ++ FF G + L Sbjct: 145 QLLDKAVSAIQGNTAELTTRVLSTAATVGGVLTEMLLTLFVLV----FFLYSGNQVWHFL 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + S +A + + +G WL GVP V L + Sbjct: 201 LKIVPSATRDEIDVAGRRGFASLVSYVRATVAVACVDAVCIGLGIWLVGVPLAVPLAALI 260 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKL 307 I A IP + AV++ + + N F A + L + + ++ L+PFL+G ++L Sbjct: 261 FIGAFIPILGAVVTGAVAVLIALVANGFVAAGIVLAIVVAVMQLESHVLQPFLLGRAVRL 320 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L G+ G+ G++G + ++A+ + I Sbjct: 321 HPLAVVLGIALGLEIAGIVGALLAVPILAVAKAALGSLQRDPPLDPVDID 370 >gi|227819774|ref|YP_002823745.1| ABC transporter transmembrane protein [Sinorhizobium fredii NGR234] gi|227338773|gb|ACP22992.1| integral membrane transport protein [Sinorhizobium fredii NGR234] Length = 672 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 110/337 (32%), Gaps = 22/337 (6%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF F P+ A+++ F P+ ++ +AVI TV+ LF L Sbjct: 55 YFASEVFLPLAIAILLTFALAPVVFRL--RRAGLPRSVAVIGTVATAFLF---LSAFSII 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS---------------H 129 +++ E+ + + I R L + E ++ + Sbjct: 110 LAMQVSEVAQNLPTYQYNIIEKIRVLKEAGSESQIFERLSRVVERISTEISRPKPETPVS 169 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P ++ + + L + +I+ + F + + + Sbjct: 170 PAPEPEQEPLLVEIFAPERPLQTLRNIIDPLLGPLATTGLVIVVVIFMLFEREELRDRFI 229 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + + L ++ + G+ L WL G+P+ + G++ Sbjct: 230 RLVGYGDLHRTTEALQDAGARVGQYLLMQLVVNVTYGIPLAIGLWLLGIPNAILWGMLAI 289 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKL 307 ++ +P P+ A+ ++L + ++ + + + P+L G L Sbjct: 290 VLRFVPYIGPVIAAALPLFLAFAAAPGWSLLVWTAALFIALELLSNNVVEPWLYGSRTGL 349 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + G +GL + L + V+ + Sbjct: 350 SPLAIIVSAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 386 >gi|169632703|ref|YP_001706439.1| PerM family permease [Acinetobacter baumannii SDF] gi|169795048|ref|YP_001712841.1| PerM family permease [Acinetobacter baumannii AYE] gi|184159168|ref|YP_001847507.1| permease [Acinetobacter baumannii ACICU] gi|213158290|ref|YP_002320341.1| permease [Acinetobacter baumannii AB0057] gi|215482597|ref|YP_002324789.1| hypothetical protein ABBFA_000876 [Acinetobacter baumannii AB307-0294] gi|239501015|ref|ZP_04660325.1| hypothetical protein AbauAB_01772 [Acinetobacter baumannii AB900] gi|260556531|ref|ZP_05828749.1| permease [Acinetobacter baumannii ATCC 19606] gi|294836605|ref|ZP_06781288.1| hypothetical protein A60131_01655 [Acinetobacter sp. 6013113] gi|294840701|ref|ZP_06785384.1| hypothetical protein A6014_02507 [Acinetobacter sp. 6014059] gi|294860824|ref|ZP_06798593.1| hypothetical protein A6013_19681 [Acinetobacter sp. 6013150] gi|301347426|ref|ZP_07228167.1| hypothetical protein AbauAB0_14283 [Acinetobacter baumannii AB056] gi|301513661|ref|ZP_07238898.1| hypothetical protein AbauAB05_18835 [Acinetobacter baumannii AB058] gi|301596501|ref|ZP_07241509.1| hypothetical protein AbauAB059_11822 [Acinetobacter baumannii AB059] gi|169147975|emb|CAM85838.1| putative permease (PerM family) [Acinetobacter baumannii AYE] gi|169151495|emb|CAP00258.1| putative permease (PerM family) [Acinetobacter baumannii] gi|183210762|gb|ACC58160.1| predicted permease [Acinetobacter baumannii ACICU] gi|193078086|gb|ABO13021.2| putative permease (PerM family) [Acinetobacter baumannii ATCC 17978] gi|213057450|gb|ACJ42352.1| permease [Acinetobacter baumannii AB0057] gi|213987714|gb|ACJ58013.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260409790|gb|EEX03090.1| permease [Acinetobacter baumannii ATCC 19606] gi|322509082|gb|ADX04536.1| Putative permease [Acinetobacter baumannii 1656-2] gi|323519112|gb|ADX93493.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 397 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 126/334 (37%), Gaps = 18/334 (5%) Query: 28 KGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-L 81 K P + A + + P+ S F+ + T++V ++VPL++ Sbjct: 26 KPVVIPFIGAFFLAYLFSPLVEVLVKIKIPRWLAISIVFIGIGVTLTVALWYLVPLIWKQ 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + + + W+S ++ +++ +T Sbjct: 86 LVYARDSIPAGIHWINAE------LLPWISST---FHVQQMEIDTDQMSKAVMDYVQTNY 136 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + ++ G+ F+ +++ + I F+F D + Q L L + A Sbjct: 137 SADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTL 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I R V+ + G ++ + G+V L G+ + +G++ + ++IP Sbjct: 197 QIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAV 256 Query: 262 FTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + + + + + I + L+PFL+G I L + F ++ Sbjct: 257 GIIAAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLA 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G + G LG+ I + A+I V+ K + + Sbjct: 317 GAQLAGFLGMLIALPVAAVIVVLLKHLRENYERS 350 >gi|313904506|ref|ZP_07837882.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] gi|313470648|gb|EFR65974.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] Length = 430 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 124/352 (35%), Gaps = 18/352 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPI---YSS--FISKKEE--SSTFLAVIATVSVM 71 I + F PV LII + P+ Y F + V A ++V+ Sbjct: 34 IFFTGISAFLDFIYPVFLGLIIAYIMDPLVMLYQKNVFQRVSKNTIRRNLSVVAAVITVL 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I ++ L + + V + + + + L ++ W +L + Sbjct: 94 AGIIFLMVALIPQIVNSISTFVGNIETYAKSLQKLLKDLENL-SSSWKFDLSSVISQGED 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ L K ++ I FG + + IF I +F D + L Sbjct: 153 MVEKLLADMPKN--LNAILDTTVSFGKSIASWVIGAIFAI----YFLIDKDRLKNAGSKL 206 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW----LAGVPSHVALGVI 247 + + + + + + +GL++G W +A +P + + V+ Sbjct: 207 LRSFVLDRTYRNYVVFWERSNQILIRYIVYDVLDGLIIGVTNWFFMAVADMPYGLLISVV 266 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + P PI A+ ++L+ N + A ++ + + L+P L + + Sbjct: 267 VGVTNLAPTFGPIVGGAIGAFILVLINPWYALTFLIFTIVLQTVDGYILKPKLFAATLGV 326 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +V G R G+ G+ + A++ I+KESI+ ++ Sbjct: 327 SGVWILICIVVGGRMFGVGGILLAIPFAAIMDYIYKESILVSLAERKARREE 378 >gi|228953629|ref|ZP_04115670.1| hypothetical protein bthur0006_30060 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228959546|ref|ZP_04121229.1| hypothetical protein bthur0005_30270 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229110765|ref|ZP_04240328.1| hypothetical protein bcere0018_30150 [Bacillus cereus Rock1-15] gi|229128624|ref|ZP_04257602.1| hypothetical protein bcere0015_30700 [Bacillus cereus BDRD-Cer4] gi|229145928|ref|ZP_04274307.1| hypothetical protein bcere0012_30770 [Bacillus cereus BDRD-ST24] gi|228637536|gb|EEK93987.1| hypothetical protein bcere0012_30770 [Bacillus cereus BDRD-ST24] gi|228654817|gb|EEL10677.1| hypothetical protein bcere0015_30700 [Bacillus cereus BDRD-Cer4] gi|228672644|gb|EEL27925.1| hypothetical protein bcere0018_30150 [Bacillus cereus Rock1-15] gi|228800115|gb|EEM47049.1| hypothetical protein bthur0005_30270 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228806054|gb|EEM52632.1| hypothetical protein bthur0006_30060 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 376 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|257125600|ref|YP_003163714.1| sporulation integral membrane protein YtvI [Leptotrichia buccalis C-1013-b] gi|257049539|gb|ACV38723.1| sporulation integral membrane protein YtvI [Leptotrichia buccalis C-1013-b] Length = 394 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 118/339 (34%), Gaps = 9/339 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ +++ ++ L F P AL + P+ +K + S +I+ V+ + + Sbjct: 18 IALILLVVFIVFKLGIFLFPFTIALFFSILARPLTRFLQNKLKLSKKIATIISIVTFLLI 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + + + E+ +L + ++ + W + + + + Sbjct: 78 FFGIIGWCSLKLVSEIYKLSQNLNSYSEMIQKL--WTDSMAKIYSYLGNFPSGFTKQIND 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + + + F L I I+A FF D I L+ Sbjct: 136 AINGFISSGSAKLGTFIKGLINFITSIPTLILYICITILATFFISLDRDKIISFLEQQFP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL-----VLGSAYWLAGVPSHVALGVIT 248 + I + V+ S I+ + ++ V + + +I Sbjct: 196 KSWLDKLFNIKTDMFTVLGSYIKAQIILMTICFFELLVCLNLLSFLHFNVAYPLLMSIII 255 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +P GA ++ G+I L + I L V + L P LV + + Sbjct: 256 CAIDALPILGAGTILIPWAVISFALGDIKLGIALIMIYLIVLS-VRQMLEPKLVSQNLGV 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L T + G + G++G IGP++M ++ ++ + + Sbjct: 315 HPLITLISMYSGFKIFGVIGFLIGPIVMIILKNVFSKEL 353 >gi|261408740|ref|YP_003244981.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|329930454|ref|ZP_08283994.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] gi|261285203|gb|ACX67174.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|328934832|gb|EGG31322.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] Length = 343 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 134/321 (41%), Gaps = 6/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP L A++I P+ + + + A + + + L LL + G+ + Sbjct: 24 APFLLAIVIAIALEPLNRLLMKRLRLNRIAAATVTSTLFLLLM---LLLAYLIGLQVFNQ 80 Query: 92 LVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV A Q+ +L I + L+ + + + + + ++ + Sbjct: 81 LVEYWSRAPQYFAGANEFLQHTIIQAQDMLNGVSPGLADSLTEFMSNISSYVQSLVNSVS 140 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F + ++ I +A++ F ++ +++ SL + + ++ + K Sbjct: 141 STFLSFAKTLPNLFVTFIVFCVAVYLFAFSLDTMREKVLSLFDESSQSQVNEVLLSLKKS 200 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I I+++ ++ + G+ +A+ ++ I+ ++P G SIYL Sbjct: 201 IFGFLRAQLILSLFTYVITLLGLLVLGINYPLAIALLVTIVDILPILGVGSVLIPWSIYL 260 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L G+IF L ++ I + ++ + L P ++G + + LP + G + +G++G F Sbjct: 261 LAVGDIFTGIGL-IFLFILITVIRRVLEPKVIGDAVGIGALPALVSMYVGFKLVGVIGFF 319 Query: 330 IGPVLMALIAVIWKESIMAIK 350 IGP+++ + + + K + IK Sbjct: 320 IGPLVVIIYSAMRKAGLFQIK 340 >gi|229070801|ref|ZP_04204029.1| hypothetical protein bcere0025_29760 [Bacillus cereus F65185] gi|229080564|ref|ZP_04213084.1| hypothetical protein bcere0023_32080 [Bacillus cereus Rock4-2] gi|229151535|ref|ZP_04279738.1| hypothetical protein bcere0011_30800 [Bacillus cereus m1550] gi|229179632|ref|ZP_04306983.1| hypothetical protein bcere0005_29800 [Bacillus cereus 172560W] gi|228603835|gb|EEK61305.1| hypothetical protein bcere0005_29800 [Bacillus cereus 172560W] gi|228632078|gb|EEK88704.1| hypothetical protein bcere0011_30800 [Bacillus cereus m1550] gi|228702665|gb|EEL55131.1| hypothetical protein bcere0023_32080 [Bacillus cereus Rock4-2] gi|228712191|gb|EEL64138.1| hypothetical protein bcere0025_29760 [Bacillus cereus F65185] Length = 376 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|227513953|ref|ZP_03944002.1| possible permease [Lactobacillus fermentum ATCC 14931] gi|227087664|gb|EEI22976.1| possible permease [Lactobacillus fermentum ATCC 14931] Length = 369 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 117/328 (35%), Gaps = 10/328 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 30 FVFTPLLVFVSVVITPLIISLFLYYMLNPLFRLLMKIKVYKWHMKRGIASLVVVIGLVLI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ +++ + A + + + +S+ P ++ + Sbjct: 90 VAGGISALIPSVLNELNQVIHWLPQAAKEIQKMIQEISEHPWVRKL-----HLSTYYGQI 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ + G I ++I + LF+ ++DG + + L Sbjct: 145 NDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITV-PVMLFYMFKDGNRLVPSVQKLFP 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + K + S G I + + Y + G P V LGV+ I M Sbjct: 204 ESSQDEVGELLRKMSKTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANM 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + I I + P ++G +++ L Sbjct: 264 IPYVGPYIGITPSLMVSIAVAPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ G+ G+ + A++ + Sbjct: 324 MLLLAAGNIAGIPGMILCIPCYAVVKTV 351 >gi|15615484|ref|NP_243787.1| hypothetical protein BH2921 [Bacillus halodurans C-125] gi|10175543|dbj|BAB06640.1| BH2921 [Bacillus halodurans C-125] Length = 361 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 126/335 (37%), Gaps = 12/335 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F++ FAPV+ A I+ + PI K +S++ LF++ + + Sbjct: 36 FVQTLFAPVIIAGILYYLFRPIVGLLSKKMNRG---------LSILILFLMIIGAFTAFS 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ EL + + + + D + ++EL+ + + + Sbjct: 87 LIVGPELQRQFQSLYNNLPTLINQVRDTFIALQSNELFNRFQESETFQPEEMISRFVNSL 146 Query: 146 IDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 D I + ++ + ++ + LF+ ++G + QL L + Sbjct: 147 NDIIGTIGANITGFIGALANFFIILVLVPFILFYLLKEGEKLPVQLLKLFNKKQQHEGRL 206 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + K++ S G I++ G++ AY + G+ + L ++ +IP P Sbjct: 207 ILADMDKMLSSYIQGQIIVSFCVGILCYIAYLIIGLDYALILALVAMFTNVIPFVGPWIG 266 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T ++ + + A + + + I + P ++G + + + F L+ R Sbjct: 267 TFPAVIVAFIDSPLTALIVVIVVVVIQQIESNLISPQVMGKKLAIHPITIIFILLVAGRF 326 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G+ + A+ VI S K K+ + Sbjct: 327 AGVVGMLLAVPTYAVGKVIVTHSYRLWKLRKQPVE 361 >gi|2126791|pir||I39826 hypothetical protein cta locus ORF2 - Bacillus firmus gi|142791|gb|AAA22369.1| ORF2; putative [Bacillus firmus] Length = 385 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 115/325 (35%), Gaps = 2/325 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + LV+ YF+ P+++AL+ P ++ K + ++ + + Sbjct: 49 ILLFLVAAYFILPVSLPLVAALLTALILTPAVNALQRKTKIKRNVAVMLVFTVFVVFIGL 108 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + ++V + + ++ Sbjct: 109 SGYYIATKAITQGTQIVENSPQYISDINRAWLNFQRNLEEKYENLPPELVQEINITVTNT 168 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + Y ++ + +IALF F + + ++L S Sbjct: 169 LSDLRSNIRDRNLIQDITSLISSIPGYLVTFLVYLIALFLFMLELPRLREKLYSYLSERT 228 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++ + VI F +++I +V + + I ++ +P Sbjct: 229 KEKVNFMTSRLSYVIWGFFKAQFLVSIIIFIVTLIGLLFIAPEVALLMAFIIWLIDFVPI 288 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ + +I+ LI G++ + L + A L I+ +T+ P ++G I L L T Sbjct: 289 IGSIVILAPWAIFQLIVGDVSTGSKLLIL-AAVLLIIRRTVEPKVMGKHIGLSPLATLIA 347 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAV 340 + G+ G++G IGP+L+ Sbjct: 348 MYLGLMLFGVIGFIIGPLLVIAFTS 372 >gi|317121059|ref|YP_004101062.1| hypothetical protein Tmar_0210 [Thermaerobacter marianensis DSM 12885] gi|315591039|gb|ADU50335.1| protein of unknown function UPF0118 [Thermaerobacter marianensis DSM 12885] Length = 510 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 115/330 (34%), Gaps = 5/330 (1%) Query: 19 IILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++ + L F + A ++ F P S + ++ V L + Sbjct: 59 VAWLAWWVLSHFARTLTLLGLAGVLAFLLEPAVSFLERGMRSRALAALLLYLAFVALLAL 118 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +++L + +EL V Q L + A P+ L Sbjct: 119 G-VVYLAGPIKEQAQELFWAVPQYRQQVEQAVPLLQTYMEALQAYLSRYGVSLEPRDLAS 177 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + N + + + +++ ++I++ + DG +++Q+ Sbjct: 178 QFLERVAGNTNRILAGVTAVVTGVGTTLANALLVLVISI-YLVVDGGGLNRQMLGYLPRR 236 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + +V G ++ + G+ +G G+P LGVI +M ++P Sbjct: 237 YRGPVRRAQAVALRVFGGYLRGQLLLGLIIGVAVGIGMSALGMPYPALLGVIAGVMELVP 296 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + + + L+ + + L P + G + L L T Sbjct: 297 IVGAVLGAIPAILVALFQPWPAVLYVTLFFVVVQQVEGNVLVPRITGQAVGLHPLATLLA 356 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ G G+LG + ++A + + +E Sbjct: 357 LLAGYEIAGILGAILAVPVVAFVQALLREF 386 >gi|224372723|ref|YP_002607095.1| acid membrane antigen A [Nautilia profundicola AmH] gi|223589133|gb|ACM92869.1| acid membrane antigen A [Nautilia profundicola AmH] Length = 332 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 122/342 (35%), Gaps = 30/342 (8%) Query: 15 MIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + F+ +V YF+ K + + A ++ + S IS K E+ + + T+ Sbjct: 3 FLTFLTIVVGYFVYLTYKPYLLDIAIASLMAIAFGKV-SVLISNKIENKYLSSTVVTLIF 61 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L P+L+ + + + + L +P + Sbjct: 62 ALLIFGPILYFVVTAGKFISHIDIENIKNIIIKAQ--DLLQYLPQFV------------A 107 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + ++I FF G I + Sbjct: 108 EKAHEYINPDNIAQIYNTVAPIIGTLTAKSAVFIKDAFLIVIFFFFATLYGKEIMEFFKK 167 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + L +K+ +V+ F AI EG++ G + G + ++ A Sbjct: 168 VIP-LEEKQLEKLFFGTSEVMSVVFYSTVFTAILEGILFGIIAKVYGF-NFFFFTIMYAF 225 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLV------- 301 ++IP G I + VS+YL GN A + L+ I + I+ D ++P ++ Sbjct: 226 SSLIPVIGGVIMWGPVSLYLYSIGNTTGAVVVALYSIIVISIIADTFIKPIIIEFVKKTF 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +L L FF +V G+ + GL G+ IGP + A+ I + Sbjct: 286 DADTELNSLLIFFSIVAGLSSFGLWGIIIGPAVTAMFISILR 327 >gi|315126962|ref|YP_004068965.1| permease (PerM) [Pseudoalteromonas sp. SM9913] gi|315015476|gb|ADT68814.1| permease (PerM) [Pseudoalteromonas sp. SM9913] Length = 358 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 122/353 (34%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++ ++ LYF PVL ALII + WP+ + + I Sbjct: 15 DPDSVTLLFLLLALVAMLYFFGPLIVPVLVALIIAYLLDWPVVH--LERFGLKRFTATGI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + +LF+ + LV + + G +L D+P + + Sbjct: 73 VMLIFIGIMLTLILFIGPVLWQQSSNLVQETPHMVEQG---KSFLLDLPDKYPSLISAEQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ F + + + + + +I + + +FF +D +S Sbjct: 130 VQSIVVTVETKVLDF-----GQVVLSASLNSLKDAVAWLIYLILVPLLVFFMLKDKVELS 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + I + G + G V A+ + + LG Sbjct: 185 ASIAKMIPRQRRLIL-QVWHEMNQQIMNYIRGKVFEILIVGSVSFIAFTILDLRYAALLG 243 Query: 246 VITAIMAMIPG-GAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA + ++ L G + + I + L P L Sbjct: 244 VLVGFSVLIPFVGAALVTIPVAAVALFQFGLETQFWTVLIIYGIIQALDGNVLVPLLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L +L+ + +E +++ Sbjct: 304 AVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALINAWSSKHEELAQEL 356 >gi|312867392|ref|ZP_07727601.1| putative membrane protein [Streptococcus parasanguinis F0405] gi|311097093|gb|EFQ55328.1| putative membrane protein [Streptococcus parasanguinis F0405] Length = 391 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 111/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F PV+ + ++ + PI F+ +K F + L I Sbjct: 42 ITFIFIPIFEFAGAVMLPVIISGLLYYLLNPIVD-FLERKGLKRIFAISFVFFLIAVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + D + + Sbjct: 101 WGLAVVIPAVQRQVVSFFHNLPTYLEKANATIDDFLDNRVSSDVKPQLDEITKELSANIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ + +++I M +F+ RDG ++ + Sbjct: 161 SWASSISGRAVNWVSNLIGVASQV----IVALIIMPFIVFYLLRDGKNLKGHIVRFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ V + + G +AI ++ + + G+ V LG+ I+ +IP Sbjct: 217 IRKSAEQVLSDVNTQLSNYVRGQITVAIVVAIMFIIFFKIIGLRYAVTLGISAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + A+E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLVAGPEMFIKVLIVFAVEQTIEGRFVSPLVLGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+G + A V+ K Sbjct: 337 LLTSGSMFGIWGVFLGIPVYASAKVVIGAIFEWYK 371 >gi|229191452|ref|ZP_04318436.1| hypothetical protein bcere0002_31140 [Bacillus cereus ATCC 10876] gi|228592027|gb|EEK49862.1| hypothetical protein bcere0002_31140 [Bacillus cereus ATCC 10876] Length = 376 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KEYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|317177600|dbj|BAJ55389.1| membrane protein [Helicobacter pylori F16] Length = 348 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 134/363 (36%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E Sbjct: 59 CVLVLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLLH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|229018580|ref|ZP_04175436.1| hypothetical protein bcere0030_31010 [Bacillus cereus AH1273] gi|229024834|ref|ZP_04181267.1| hypothetical protein bcere0029_31410 [Bacillus cereus AH1272] gi|228736468|gb|EEL87030.1| hypothetical protein bcere0029_31410 [Bacillus cereus AH1272] gi|228742719|gb|EEL92863.1| hypothetical protein bcere0030_31010 [Bacillus cereus AH1273] Length = 373 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 41 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYIIVLGLFV 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 100 FLVVTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 156 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 216 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 276 YVGPIIAITPALIIAFIDSPSMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 336 ILTAGNLFGIMGIILAIPGYAILKVL 361 >gi|293402296|ref|ZP_06646434.1| membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304403|gb|EFE45654.1| membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 403 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 105/302 (34%), Gaps = 12/302 (3%) Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 A++A + + + L L M + LV + +++D Sbjct: 81 HRRNIAAILAVLLGIIIVGAFLAMLIPQLMESILSLVKAFPGYME---DTQEFINDFIEE 137 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + +L F+ T+ + + ++ +FG LD L I++ + Sbjct: 138 NGIAAEEITKMLSQNNLLTRMTEFV-TDAVPKMLKYTYQFGSTLLDIVLG----IMSGLY 192 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIV----PKVIRSTFLGMTIIAIGEGLVLGSA 232 D + + LFP + + + + +G I ++ G++ Sbjct: 193 MLIDKERLMGYAKRINYALFPIEIAEYLHRMTLASGDIFNNFIVGKAIDSLIIGILCYIG 252 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + P + L V + MIP P I +L + A L+ + Sbjct: 253 SLIFQFPYALLLSVFVGVTNMIPVFGPFIGAVPGIVILFIIHPITALYFALFIFVLQQFD 312 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L P ++G + LP + F + G G++G+FIG A+I +E + + Sbjct: 313 GNILGPLILGDKLGLPSIGILFSVCVGGGLFGIIGMFIGVPCFAVIYAAVREFVNYRLKQ 372 Query: 353 KE 354 K+ Sbjct: 373 KK 374 >gi|86739869|ref|YP_480269.1| hypothetical protein Francci3_1161 [Frankia sp. CcI3] gi|86566731|gb|ABD10540.1| protein of unknown function UPF0118 [Frankia sp. CcI3] Length = 415 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 97/307 (31%), Gaps = 14/307 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+++ L+I P+ + + A A +F+ + + + E+ + Sbjct: 110 PLIAGLLIAALIHPLAHRL-QRLGMNRLGAAFTALFVFFAVFVGAGVAVGFNAANEIPTV 168 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +V + I G + L + + ++ G + Sbjct: 169 SDQVSEG----------VEQIRGYLRNGPLHLSQSQIDNLVDDIRKSLANNRGR--LVSG 216 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + + ++ + + FFF DG I + + + R + Sbjct: 217 VISGASVAAEVLTGLLVTLFSTFFFLYDGDRIWNWIVTRFPDGAEERVRGAGREAWNTLT 276 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 G +A + + + GVP L ++T +P GA ++ A + L+ Sbjct: 277 GYIRGTVFVAAVDAIGITIGLVGVGVPLVAPLALLTFFGGFVPIVGATVAGAAAVLVTLV 336 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + +A + + L+P ++ ++L L L G G+ G Sbjct: 337 SNGVPDALIILGVVLAVQQVEGHLLQPLVMRRAVRLHPLAIVIALSAGGVLAGIPGAIAA 396 Query: 332 PVLMALI 338 A++ Sbjct: 397 VPFAAMV 403 >gi|114764029|ref|ZP_01443270.1| Lipocalin-related protein and Bos/Can/Equ allergen [Pelagibaca bermudensis HTCC2601] gi|114543621|gb|EAU46635.1| Lipocalin-related protein and Bos/Can/Equ allergen [Roseovarius sp. HTCC2601] Length = 356 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 116/340 (34%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I +V L+ L P + + + P+ + S TV+++ +F++ Sbjct: 16 AAIFVVMLWVLGDVLLPFVVGGAVAYFLDPVADRLE-RVGMSRGMATGTITVAMILIFVI 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + +L+ P + + P ++ Sbjct: 75 LALAVVPALVRQTSQLIE----------TAPELFRQLQAFLSTHFPSIMVEGSPVRETLV 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S + M ++ L + + + + D ++ ++DSL Sbjct: 125 SIGETIRERGAQLIDAVLTSAMSLINILLLFVIVPVVAVYMLLDWDNMVARVDSLLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +K++R + K + GM + + G A WL G+ + +GV+ I+ IP Sbjct: 185 APVIRKLARDIDKTLAGFIRGMGSVCLILGFYYALALWLVGLNFGLVVGVVAGILTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I A++I L + G + F+ L P LVG + L + Sbjct: 245 VGAIVGGALAIGLALFQFWGEWVWIAAVAGIFFFGQFLEGNFLTPKLVGESVGLHPVWLI 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + L A + V+ + + E++ Sbjct: 305 LALSVFGSIFGFVGMLVAVPLAAALGVVARFLVDQYIESR 344 >gi|116494273|ref|YP_806007.1| permease [Lactobacillus casei ATCC 334] gi|191637608|ref|YP_001986774.1| Predicted permease [Lactobacillus casei BL23] gi|239629657|ref|ZP_04672688.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065781|ref|YP_003787804.1| putative permease [Lactobacillus casei str. Zhang] gi|116104423|gb|ABJ69565.1| Predicted permease [Lactobacillus casei ATCC 334] gi|190711910|emb|CAQ65916.1| Predicted permease [Lactobacillus casei BL23] gi|239528343|gb|EEQ67344.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438188|gb|ADK17954.1| Predicted permease [Lactobacillus casei str. Zhang] gi|327381659|gb|AEA53135.1| hypothetical protein LC2W_0801 [Lactobacillus casei LC2W] gi|327384826|gb|AEA56300.1| hypothetical protein LCBD_0802 [Lactobacillus casei BD-II] Length = 388 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 118/345 (34%), Gaps = 19/345 (5%) Query: 17 MFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +F+ + + P + A I+ + + PI + K + Sbjct: 31 IFVFTKIAWVFQPVLDFLGIIAPPFIFAGILFYLTVPIINRLE-KFGLHRGWA------- 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + LFIV + L + + + + +++ + + + + Sbjct: 83 IGLLFIVLIGLLAWGLLRFIPAVSNQITSIVHSAPQIFDEIGKWLDNLNDQQNILSQHDL 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFAS--RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + F G + I + ++I I LFF +DG + Sbjct: 143 NEIAAEVQSFFTGKQGAFVTGTISQLQNLIGIVGNVVITISTAPIILFFMLKDGDKFTPM 202 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + K++ + + + S G +A+ ++ Y + G+ + G++ Sbjct: 203 VLHIVPTKLRRSVKQMLHEMNEKVGSYVQGQITVALCVAVMFMVGYSVIGLRYGLIFGLL 262 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP G+ ++ I + + + + IE I + + P ++G ++ Sbjct: 263 ACPLNLIPYFGSALAMIPPLIMGALT-SPRMILAVIIVFFIEWLIETQVISPLVMGSKLE 321 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L+ GL+G+ +G A++ ++ ++ Sbjct: 322 LHPITIVVVLLTAGNLFGLVGVILGIPGFAVLKIVVTRFFSWYQQ 366 >gi|327472814|gb|EGF18241.1| permease [Streptococcus sanguinis SK408] Length = 365 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 117/336 (34%), Gaps = 17/336 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCLVPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL K Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--------SGLLSSSQLKDLTKQ 138 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + I + IF ++ S+I I +F F + L + L Sbjct: 139 LQNSDIVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + G GL+G+ + A+I + +E ++ Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVV 353 >gi|299783476|gb|ADJ41474.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 369 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 123/346 (35%), Gaps = 10/346 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 30 FVFTPLLVFVSVVITPLIISLFLYYMLNPLFRLLMKIKIYKWHMKRGIASLVVVIGLVLI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ +++ + A + + + +S+ P ++ + Sbjct: 90 VAGGISALIPPVLNELNQVIHWLPQAAKESQKMIQEISEHPWVRKL-----HLSTYYGQI 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +++ + G I ++I + LF+ ++DG + + L Sbjct: 145 NDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITV-PVMLFYMFKDGNRLVPSVQKLFP 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + + + S G I + + Y + G P VALGV+ I M Sbjct: 204 ENSRDEVGELLRKMSQTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVALGVVAGIANM 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P P S+ + I + + I I + P ++G +++ L Sbjct: 264 VPYVGPYIGITPSLMVSIAVAPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G+ G+ + A++ I I K + +N Sbjct: 324 MLLLAAGNIAGIPGMILCIPCYAVVKTIVTYLISIYHLRKREGDNN 369 >gi|330504186|ref|YP_004381055.1| hypothetical protein MDS_3272 [Pseudomonas mendocina NK-01] gi|328918472|gb|AEB59303.1| hypothetical protein MDS_3272 [Pseudomonas mendocina NK-01] Length = 356 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 122/324 (37%), Gaps = 14/324 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +P L +++ + P+ + + + V+ + L L ++ Sbjct: 24 HPILSPFLVGILLAYLGDPLVDRLERHRLSRTGGVVVVFALF--------ALLLLILLLV 75 Query: 88 EMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKT-N 144 + L ++V Q + WL +P L L Q ++ ++ KT + Sbjct: 76 LVPMLGRQLVRLYQLAPEMLDWLQGTALPWSQSHLGLQDDVLQLDQLKQVFADNIGKTTD 135 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + A+ G+ L + +++ + + F+ RD + +++ L K++ Sbjct: 136 VLKVVLAQATSSGLALLAWLGNLLLIPVVSFYLMRDWDVLVERVRGLLPRQREGLVVKLA 195 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 +V+ + G ++ + ++ L G+ + +GV+ + +++P I Sbjct: 196 GECHEVLGAFLRGQLLVMLALSVIYSVGLMLVGLELGLLIGVLAGLASIVPYMGFIVGIG 255 Query: 265 VSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + I + L P LVG I L + F ++ G + Sbjct: 256 AALSAALFQFGLEPYPLIGIAVVFMIGQLLEGMVLTPMLVGDRIGLHPVAVIFAILAGGQ 315 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G G+ + + A+I V+ + + Sbjct: 316 LFGFTGVLLALPVAAVIMVLLRHA 339 >gi|222096816|ref|YP_002530873.1| hypothetical protein BCQ_3156 [Bacillus cereus Q1] gi|229197465|ref|ZP_04324192.1| hypothetical protein bcere0001_30100 [Bacillus cereus m1293] gi|221240874|gb|ACM13584.1| membrane protein, putative [Bacillus cereus Q1] gi|228586089|gb|EEK44180.1| hypothetical protein bcere0001_30100 [Bacillus cereus m1293] Length = 376 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|254422637|ref|ZP_05036355.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190126|gb|EDX85090.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 365 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 22/329 (6%) Query: 22 VSLYFLKGF---FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 V+L F F L+A ++ F +P+ ++S+ + ++ + + + V Sbjct: 26 VALQIFAYFRTQFTIFLTATLLSFVLNYPVQ--WLSRFRLRRSLAILLVLLITVSVLGVL 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + ++ EL ++ P W+ + A + W L+ P L LS Sbjct: 84 GVILAPPLVEQLNELSGRL----------PSWIDSSTSQVTAFQNWAVSLNLPIDLSRLS 133 Query: 138 ETFLKTNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 AS G++ + + + ++ F+ G + L Sbjct: 134 TQLQTRITTQVQTISASILGLLPDAISSVVDLGLTVVLTFYLLLHGERLWDGLYQWLPDS 193 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A + ++ + ++ FLG +A+ G + A+ + VP + G+ +MA+ P Sbjct: 194 WNARARP---LIKQNFQNYFLGQFTVAMLMGTAMTIAFVVIQVPFGLLFGIAVGVMAIFP 250 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G +S T +S +L +I+ + A+ +V+ + P L+GG + L + Sbjct: 251 FGPALSITIIS-FLTALKSIWLGVRVVTVAAVIDQVVENAIAPQLIGGFVGLNPVWILVS 309 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G + G+LGL + + + I I+++ Sbjct: 310 LLLGTKIAGVLGLIVAVPVASSIKSIFED 338 >gi|291540406|emb|CBL13517.1| Predicted permease [Roseburia intestinalis XB6B4] Length = 462 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 128/372 (34%), Gaps = 38/372 (10%) Query: 6 LNPQGIMRWMIMFIILVS--LYFLKGF---------------FAPVLSALIIGFTSWPIY 48 L PQ ++ +++F+ L+F + P++ ++I + PI Sbjct: 29 LKPQYVIIALVVFVTFCCCILFFFMIYRYNGFTDFWKKLSLILQPIIIGVVIAYLLNPIM 88 Query: 49 S------------SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 SK + T + T S++ L + +L + + S + Sbjct: 89 KFLEGHLLKFLEPRMKSKCKAKKTSRGIAITGSLVFLVGICVLLVAAIVPSISASIQSMI 148 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q + +W+ ++ G +EL + + ETF + + + + + Sbjct: 149 TSFPQEAKDLTKWVDEVTNGD--TELASMIQQGVDKITDTVETFFEDDIFSKVQTYLTSI 206 Query: 157 GMIF---LDYCLSIIFMIIALFFFYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPK 209 + + L++I +I + D + Q + ++ + + R + Sbjct: 207 TSGVIYGVKFVLNVIVGLIISVYVMADQEHFAGQAKKIVYAMFKPVRANVIVDTVRKSNE 266 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + G + + G++ + +P V + VI + +IP P S + Sbjct: 267 IFSGFISGKILDSAIIGVLAYIVLAIMKMPDTVLVAVIIGVTNVIPFFGPFIGAVPSFII 326 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ N ++ + I + P ++G L F ++ G G+ Sbjct: 327 IVLQNPIQGLYFLIFIVVLQQIDGNIIGPKILGSSTGLSAFWVVFAILVFGGLWGFPGML 386 Query: 330 IGPVLMALIAVI 341 +G LMA+I + Sbjct: 387 LGVPLMAVIYYV 398 >gi|229097812|ref|ZP_04228765.1| hypothetical protein bcere0020_30500 [Bacillus cereus Rock3-29] gi|229103884|ref|ZP_04234562.1| hypothetical protein bcere0019_30350 [Bacillus cereus Rock3-28] gi|228679452|gb|EEL33651.1| hypothetical protein bcere0019_30350 [Bacillus cereus Rock3-28] gi|228685569|gb|EEL39494.1| hypothetical protein bcere0020_30500 [Bacillus cereus Rock3-29] Length = 376 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVANIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPVIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIVLAIPGYAILKVL 364 >gi|255279990|ref|ZP_05344545.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] gi|255269763|gb|EET62968.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] Length = 368 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 114/334 (34%), Gaps = 15/334 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++ ++ +L P + A I F + K + A + +F Sbjct: 16 LFAVLVCLAWRYLYPALMPFILAFAIAF----LIRKLAGKLPCKGKWTATLLLALFYVIF 71 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + ++ + + I D G S L S ++ Sbjct: 72 FGTIFLGGSKMIGTVAGFITNLPELYRTQIVP---FLDGVSGDIGSILGKTDASLAGEIQ 128 Query: 135 ILSETFLKTNGIDF------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +++ G + I S F + +I M++A F+ D I Sbjct: 129 KGIQQMIQSMGENLSSLSMNILTGLSEFVTGIPALVVKVIVMVVASFYMTADYDRIMAAA 188 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ ++ + L + WL +P + + Sbjct: 189 GKYLPEKVKRTVRTVKEHGGNTLKAYLKSYFLLFLITFAELAAGLWLLRIPYAPLIALAI 248 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+ ++P G + LL+ GN A + + + + IV TL P +VG + L Sbjct: 249 AVFDILPVLGTGGILLPWTAVLLVMGNYPMAAGILVLYIVIV-IVRNTLEPKIVGKQVGL 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G++ GL G+ + P+ + ++ + Sbjct: 308 HPLVTLVAMFTGLQLGGLPGIILAPMGVVILVNM 341 >gi|331700348|ref|YP_004336587.1| hypothetical protein Psed_6646 [Pseudonocardia dioxanivorans CB1190] gi|326955037|gb|AEA28734.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans CB1190] Length = 493 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 103/316 (32%), Gaps = 14/316 (4%) Query: 39 IIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 ++ P+ ++++ + + + L L F+ + L +++ Sbjct: 149 LLSALLAPVVHWLVARRVPR-GPATFLVLIGGIALLGGLLSFVINTFIAGFPALQAQLTA 207 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 + Q + + G ++ + P ++ + D + A Sbjct: 208 SFQS-------VQQLLAGPPLRIPTSQLDNLPAQIEQAIR-----DNRDVLTSGALTTAA 255 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + + + +L FF DG I + L R + Sbjct: 256 TVTEIAAGLALTLFSLIFFLYDGPRIWRFLLRAAPRARRERVDVAGRRAFASLVGYTRAT 315 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFN 277 ++AI + + +G W GVP V L + + A IP + AV++ L+ + Sbjct: 316 VLVAIVDAVGIGIGLWAVGVPLVVPLAALVFLGAFIPTVGAVVTGAVAVLIALVANGLIP 375 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A + + L+P L+G + L L + GV G+ G + L+A+ Sbjct: 376 ALIILGVVVAVQQLEGHVLQPLLLGRAVSLHPLAVVLSVAAGVVISGIAGALLAVPLLAV 435 Query: 338 IAVIWKESIMAIKENK 353 I + + + Sbjct: 436 ITAAVRSLTAPTEPSP 451 >gi|47564492|ref|ZP_00235537.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|228986432|ref|ZP_04146568.1| hypothetical protein bthur0001_31140 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47558644|gb|EAL16967.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|228773253|gb|EEM21683.1| hypothetical protein bthur0001_31140 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 376 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|224418441|ref|ZP_03656447.1| membrane protein- permease [Helicobacter canadensis MIT 98-5491] gi|313141972|ref|ZP_07804165.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131003|gb|EFR48620.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 354 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 133/356 (37%), Gaps = 19/356 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRE I+ +I + L F +L A ++ + I+ + K + + Sbjct: 1 MREASKGIYFFSAAFILTLIAL-LKLYSPFLMNILIAFLLFIATHSIFQVILKKIKSTFL 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + ++ F+ +Y + + + LA+ + + G Sbjct: 60 TSLLMTLLLLVLCFV-----PIFYVAINLASFAGNIDLASLQKFFTDMQVKILITGKDFL 114 Query: 121 ELWTKHLSHP-QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E L L + + + ++ + +F++I LFFFY Sbjct: 115 EYLPVALQQQINDLLLSVNSINWAEILKKALSVVAKISTNSAYFLSDAVFIVIFLFFFYY 174 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + + + K + V VI F + + +G++ G Sbjct: 175 YGNALGRYCLEIIP-IEKQQIKTLYDEVSAVISVVFYSSIVSMVLQGVLFGILMAFYRYD 233 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLR 297 S + LGV ++IP G + + V Y L GN+ NA + L+ I + + D ++ Sbjct: 234 S-ILLGVFYGFASLIPVVGGTLVWLPVVCYELYLGNVTNAIVIALYSIIIIATLADNGVK 292 Query: 298 P--------FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L+ P+K+ + FF ++ G+ + G G+ +GP + AL + + Sbjct: 293 PFVIAFINRILIETPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITALFIAMLRIY 348 >gi|145592845|ref|YP_001157142.1| hypothetical protein Strop_0279 [Salinispora tropica CNB-440] gi|145302182|gb|ABP52764.1| protein of unknown function UPF0118 [Salinispora tropica CNB-440] Length = 423 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 96/288 (33%), Gaps = 7/288 (2%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + L + L + E + + + + R + + + Sbjct: 130 LATAVVLVGGLAAVIGTLTLVVNEFIQGLPVLGEKSSQGVRQIQNWLRSGPLRLEDEQLD 189 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ ID + A + I ++ A FFF RDG I + Sbjct: 190 RYINDVEGWLNE-----NIDGLTSGALSTAATVAEVLTGTILVLFATFFFLRDGNRIWRF 244 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L R + + + ++A + L +G + +P + L + Sbjct: 245 LVRLMPVNARWKVDDAGRASWQTLGAYVRATVLVACIDALGIGIFLVIFEIPFALPLAAL 304 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP GA +S + L+ A + + L+P ++G + Sbjct: 305 VFLASFIPIIGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPLIMGRAVA 364 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 + L G+ GV G+ G I P++ L + + + + E Sbjct: 365 IHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRLAARTVPETP 412 >gi|52142187|ref|YP_084642.1| permease [Bacillus cereus E33L] gi|51975656|gb|AAU17206.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] Length = 376 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKNQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|58698754|ref|ZP_00373638.1| hypothetical protein WwAna1163 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630700|ref|YP_002727491.1| hypothetical protein WRi_009930 [Wolbachia sp. wRi] gi|58534727|gb|EAL58842.1| hypothetical protein WwAna1163 [Wolbachia endosymbiont of Drosophila ananassae] gi|225592681|gb|ACN95700.1| hypothetical protein WRi_009930 [Wolbachia sp. wRi] Length = 354 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 128/351 (36%), Gaps = 13/351 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-----T 60 + + I I+ I+ L+ ++ P L +++I + P+ F + S Sbjct: 1 MQKRHITICFILLFIIGMLFLMRPMIFPCLISVVIAYLFNPLVVKFEKYRIPRSCSVIFI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 L ++ ++ F++P++++ +L LVSKV IP +I Sbjct: 61 ILILLIAFILVITFVLPIIYVQITSILNF--LVSKVPSLKLKVIPSVLEFLNIKIEDSLF 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + +K+L+ S + N +D F + + ++ + F+ RD Sbjct: 119 DHLSKNLAENYSNYVS----YFMNALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I ++ L + V +I + G + I + + + G+ Sbjct: 175 WPLIIEKASKLIPIPYRGKIADYFSKVDFIISNYLKGQVNVCIVMMVFYSVSLSIIGLEH 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+++ ++ IP P+ +T + I F + + L + I L P Sbjct: 235 SIVIGILSGMLTFIPYVGPLLYTIIGFLSAITQFSGWFESAAVLLLFGVGQLIDSNILVP 294 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+G + + G+ G G+ + ++A+ V + +I Sbjct: 295 LLIGKKVHIHPTVIILGITICASYFGFTGILLFIPIIAMFNVSVEYAINKY 345 >gi|256826953|ref|YP_003150912.1| putative permease [Cryptobacterium curtum DSM 15641] gi|256583096|gb|ACU94230.1| predicted permease [Cryptobacterium curtum DSM 15641] Length = 405 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 122/347 (35%), Gaps = 7/347 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +++++ L L + +I F + + + ++ V + Sbjct: 39 IGSIVLLYLCGQVLTILAVPVGIAVWTAVIVFCLRNVVNRLVRYMP--RAVAVSLSYVLM 96 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F + + + + S + Q + RW +++ G + Sbjct: 97 IVVFGLVVWLMSSPFFGIGAQFSSIIESTPQLAGEISRWYTELSGTYPDIMQSPQVAQWL 156 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ T+ + I AS G + + I F ++ ++ D ++ ++ Sbjct: 157 VDIQNSLITWTQQAASSGISGLAS-VGASAANSFICIGFALVVAYWVLLDAPAMGREAYR 215 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + A + I +V+ G + + ++ +++ GVP+ +A +I I Sbjct: 216 ICGDAHAAELRFIHETFTRVVGGFIQGTLLQCLIIMVLCMIVFFVLGVPNAMAFALICGI 275 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +IP P + + ++A ++ +V + P ++ + + + Sbjct: 276 LNIIPVVGPWLGGVAAALAALSVGPWSALLSLVFTIAIQQVVYTFVSPKIMSSSVDVHPM 335 Query: 311 PTFFGLVG----GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G + G +G G +L +A K I+ + E + Sbjct: 336 IVIMAMMCGSALGAQMSGFMGSITGMLLSIPLAAFAKALIVHVLERR 382 >gi|295704012|ref|YP_003597087.1| putative membrane protein YueF [Bacillus megaterium DSM 319] gi|294801671|gb|ADF38737.1| putative membrane protein YueF [Bacillus megaterium DSM 319] Length = 363 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 116/326 (35%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L F+ F P+L A + F PI S KK T ++ V + + Sbjct: 26 ISFVFLPIGVFISTLFFPILVAGFLFFLFEPIVSFLTRKKVP-KTLAILLLYVVFIGVIA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +L + LS+ W E L H + + Sbjct: 85 SIVGGVGPTLSKQLTDLAKNIPSYIVETRKYINDLSNSRWFNWLVEQKYVSLDHIEESLL 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L TN + I S I L+++ + LF+ +D + + + Sbjct: 145 NYASTLPTNLTNSISSVLSVVTNIT----LTVVTVPFILFYMLKDSHKLRKNTLRMVPAS 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + + G ++ + G+ Y + G+P + L +I A+ +IP Sbjct: 201 YRKETLRTMKETTNTLATYIQGQMLVCLFVGISTFIGYLIIGLPYALILALIGALTNIIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + + P ++G + L Sbjct: 261 YVGPFIGVAPALIVGLLYSPTKAILVIIVVVIVQQLDGNIISPLVIGKKLNTHPLTIIIL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ G+LG+ + A+ I Sbjct: 321 LLVAGNIAGILGMILAIPAYAVTKTI 346 >gi|269138449|ref|YP_003295149.1| putative permease [Edwardsiella tarda EIB202] gi|267984109|gb|ACY83938.1| putative permease [Edwardsiella tarda EIB202] gi|304558475|gb|ADM41139.1| Putative permease PerM [Edwardsiella tarda FL6-60] Length = 359 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 123/355 (34%), Gaps = 16/355 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I I+ + +YF G AP+L A+++ + WP + + S Sbjct: 10 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHK--LQLVGCSRL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 + + + + + ++ +L + + L+S + + + P M A Sbjct: 68 WAVCVVLLLFIGIVLLTMLVVIPIAWQQGLALMSDMPKMVTRFYEYAATLPRRYPALMDA 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + ++ E+ LK + + + + ++ + + +FF + Sbjct: 128 GIIDVVVENLRARMALMGESVLKFSLASLV---------GLVTLAIYLVLVPLMVFFLLK 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + L + + + + I + G + + G+ + + G+ Sbjct: 179 DKGQMLNALRRVLPRERGLAGQVWLE-MNQQITNYIRGKVVEMLVVGVATYLVFLVLGLN 237 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLR 297 + L V+ + +IP GA + V + L + + LF+ + + L Sbjct: 238 YGLLLAVLVGVSVLIPYIGAVLVTIPVVLVALFQWGMGADFWSLFIAYLVVQGLDGNVLV 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P L + L L ++ G G+F L L+ + + Sbjct: 298 PLLYSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDDFGND 352 >gi|229591908|ref|YP_002874027.1| putative transmembrane protein [Pseudomonas fluorescens SBW25] gi|229363774|emb|CAY51192.1| putative transmembrane protein [Pseudomonas fluorescens SBW25] Length = 357 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 125/343 (36%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ V ++ L P L AL++ + P+ K S T+ V + Sbjct: 13 VVLLCVFVFLLHSILTPFLVALLLAYLFDPVVDRLE-KAGLSRTWGVVAVFALFTLIITA 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 +L L ++ L + WL +P L + Sbjct: 72 LVLVLVPMLAKQLFRLYELA-------PQMLDWLQHTAMPWAQAKLGLADGFWKFDKVKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE +T + + I A+ + + + +++ + + F+ RD + ++ SL Sbjct: 125 AISEHMGQTTDIVGVILSQATASSLALIGWLTNLVLIPVVAFYLLRDWDIMMAKIRSLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + G+ + +G+I + A+ Sbjct: 185 RNREERIVSLAEECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLIGLIAGLAAI 244 Query: 254 IPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + ++ G+++ + + + L P LVG I L + Sbjct: 245 VPYMGFVIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 305 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHVHDLYKDSE 347 >gi|227554814|ref|ZP_03984861.1| possible permease [Enterococcus faecalis HH22] gi|229546528|ref|ZP_04435253.1| possible permease [Enterococcus faecalis TX1322] gi|229548646|ref|ZP_04437371.1| possible permease [Enterococcus faecalis ATCC 29200] gi|307269734|ref|ZP_07551064.1| hypothetical protein HMPREF9498_01861 [Enterococcus faecalis TX4248] gi|307272513|ref|ZP_07553766.1| hypothetical protein HMPREF9514_01277 [Enterococcus faecalis TX0855] gi|307274712|ref|ZP_07555884.1| hypothetical protein HMPREF9521_00331 [Enterococcus faecalis TX2134] gi|307284538|ref|ZP_07564700.1| hypothetical protein HMPREF9515_02473 [Enterococcus faecalis TX0860] gi|307289607|ref|ZP_07569551.1| hypothetical protein HMPREF9505_02968 [Enterococcus faecalis TX0109] gi|307296548|ref|ZP_07576370.1| hypothetical protein HMPREF9509_03208 [Enterococcus faecalis TX0411] gi|312900294|ref|ZP_07759606.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312904281|ref|ZP_07763443.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312953084|ref|ZP_07771934.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|227176113|gb|EEI57085.1| possible permease [Enterococcus faecalis HH22] gi|229306277|gb|EEN72273.1| possible permease [Enterococcus faecalis ATCC 29200] gi|229308340|gb|EEN74327.1| possible permease [Enterococcus faecalis TX1322] gi|306496021|gb|EFM65607.1| hypothetical protein HMPREF9509_03208 [Enterococcus faecalis TX0411] gi|306499421|gb|EFM68794.1| hypothetical protein HMPREF9505_02968 [Enterococcus faecalis TX0109] gi|306503215|gb|EFM72469.1| hypothetical protein HMPREF9515_02473 [Enterococcus faecalis TX0860] gi|306508641|gb|EFM77739.1| hypothetical protein HMPREF9521_00331 [Enterococcus faecalis TX2134] gi|306510798|gb|EFM79815.1| hypothetical protein HMPREF9514_01277 [Enterococcus faecalis TX0855] gi|306513844|gb|EFM82446.1| hypothetical protein HMPREF9498_01861 [Enterococcus faecalis TX4248] gi|310628993|gb|EFQ12276.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310632377|gb|EFQ15660.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311292655|gb|EFQ71211.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315025697|gb|EFT37629.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315029067|gb|EFT40999.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315034473|gb|EFT46405.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315145308|gb|EFT89324.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315146984|gb|EFT91000.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315154004|gb|EFT98020.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315156647|gb|EFU00664.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315157763|gb|EFU01780.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315162015|gb|EFU06032.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315164523|gb|EFU08540.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315170734|gb|EFU14751.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315173965|gb|EFU17982.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315575328|gb|EFU87519.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315578722|gb|EFU90913.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315581495|gb|EFU93686.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|327534290|gb|AEA93124.1| putative permease [Enterococcus faecalis OG1RF] gi|329576852|gb|EGG58337.1| hypothetical protein HMPREF9520_01311 [Enterococcus faecalis TX1467] Length = 404 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 63 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 121 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 122 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 175 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 176 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLG 235 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 236 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 295 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 296 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 355 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +K + + +N Sbjct: 356 LGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 389 >gi|163792846|ref|ZP_02186822.1| hypothetical protein BAL199_23694 [alpha proteobacterium BAL199] gi|159181492|gb|EDP66004.1| hypothetical protein BAL199_23694 [alpha proteobacterium BAL199] Length = 369 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 111/334 (33%), Gaps = 13/334 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 Y L+ P ++ + + + P+ + I + L I LL L Sbjct: 20 GFYVLRDVLVPFVAGMAVAYLLDPVVDRLERVRVPR-GLATFIVLLGFFALAIGLLLLLI 78 Query: 83 YYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++L S + + I + L+ + G+ K L + + Sbjct: 79 PLLQSQFEKLASTLPGYVDMVRIRLAPLLAHVNEGLDRQAALQKVTGMTGDLVSWAGGVI 138 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G + ++ I F+ RD I +D + Sbjct: 139 SRVISG---------GFAIANLLSLLLITPIVSFYLLRDWDRIVAAVDGWLPREQAPMIR 189 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 V + + + G + + G+ +AG+ + +G+ + +++ +P + Sbjct: 190 SQVAAVDRTLAAFVRGQGTVCLILGVFYAVGLTVAGLNFGLVIGLFSGLISFVPFIGALL 249 Query: 262 --FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 +V + L + + A + L P LVG + L + FGL+ G Sbjct: 250 GGVLSVGLALAQFDSWQAVAIVAAVFAAGQMLEGNFLTPNLVGEAVGLHPVWVIFGLLAG 309 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +G+ + + A+I V+ + ++ ++ Sbjct: 310 GTLFGFVGVLLAVPVAAVIGVLTRFALAQYLDSP 343 >gi|110803430|ref|YP_699190.1| hypothetical protein CPR_1880 [Clostridium perfringens SM101] gi|110683931|gb|ABG87301.1| putative membrane protein [Clostridium perfringens SM101] Length = 372 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 118/341 (34%), Gaps = 16/341 (4%) Query: 27 LKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F + P A + + P+ + F +I+ + V+ + + + Sbjct: 36 IRPFLSVLTPFFWAFGVAYLINPLMMLIEKSFKLKRAFSLMISYILVIICVYILIAIIVP 95 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + EL S + +++ W++ M L HL+ + I + L + Sbjct: 96 TIFDSLSELFSNL---SEYASSAESWINSTLASMNV-PLDLNHLNTSATEFISKTSTLLS 151 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK- 202 N + + + + + I I + D ++ + + P+ Sbjct: 152 NIVGSLLTQTIKITSSVVKFVFGFIISI----YMLMDKETLIGGCKKIIIAVMPSEKSSE 207 Query: 203 ----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +G I ++ G++ L G V + I + MIP Sbjct: 208 LFISFMAEAHNIFSRFIIGKIIDSLIIGVLCYIGLLLMGTQYAVLISFIVGLTNMIPYFG 267 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + L + A + L+ I L P ++G + + L F + Sbjct: 268 PFIGMIPAFLLTLIVQPSMAIWVLLFIFILQQFDGWYLGPKILGDQVGVSPLFIIFAVTV 327 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+LG+F+ ++ALI + ++ I ENK++ N Sbjct: 328 GGGIFGVLGMFLSVPIIALIKIYTEKLIEYRLENKKQNLKN 368 >gi|145221061|ref|YP_001131739.1| hypothetical protein Mflv_0457 [Mycobacterium gilvum PYR-GCK] gi|315441968|ref|YP_004074847.1| permease [Mycobacterium sp. Spyr1] gi|145213547|gb|ABP42951.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] gi|315260271|gb|ADT97012.1| predicted permease [Mycobacterium sp. Spyr1] Length = 383 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 122/352 (34%), Gaps = 18/352 (5%) Query: 13 RWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +++F +V+L +L + PV A II P+ F+ ++ + + Sbjct: 28 RLLVIFAAIVTLLWLVLRLEILVVPVALATIIAALLLPVVD-FLDRRGAPRGGAVALVLL 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF L F+ + +LV +V + + V +WL+D P + ++ + Sbjct: 87 TGFALFGGLLAFVVTQFVEGAPDLVGQVSTSIEG---VGKWLTDGPLQVSDQQINQARDT 143 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++L+ E + A + + + L F G +I + Sbjct: 144 AIEALQSNQEK---------LTSGALSTAGTLTEIVTGALLVFFTLIFLLHGGRNIFSFV 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + + ++A + + +G + GVP + L + Sbjct: 195 TRIFPSHVRGRVHDAGRAGFRSLIGYVRATFLVAAVDAIGIGVGLAIMGVPLALPLASLV 254 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P GA ++ I LI A + L+P ++G + + Sbjct: 255 FMGAFVPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVMGRAVAI 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + GG G++G + ++A + + +E+ Sbjct: 315 HPLAIVLAIAGGAVLAGIVGALLAVPVLAFLNSAIRVLTADDPVAEEQAMEE 366 >gi|167760610|ref|ZP_02432737.1| hypothetical protein CLOSCI_02992 [Clostridium scindens ATCC 35704] gi|167661735|gb|EDS05865.1| hypothetical protein CLOSCI_02992 [Clostridium scindens ATCC 35704] Length = 386 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 121/356 (33%), Gaps = 10/356 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-----ISKKEESSTFLAVIATVS 69 +++ ++ + + F A I+ I + + + ++ + Sbjct: 30 VVVSVLAFIFHVIFPFVLGGAIAFILNVPMNFIQRHLFAPERVERHKIQKKIARPVSMLI 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + ++ + S + + Q IP V W + W L Sbjct: 90 VIFGVFGIVALVMFVLIPQLGDTFSNLGSSIQAFIPKVQEWAEKLFHDNKEIMTWVNSLK 149 Query: 129 HPQSLKILSETFLKTNGIDFIP----RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + NG + A + ++ +F + L + G Sbjct: 150 FDWNKIMGAGIDFFKNGAGSVLDSTITAAKSIVSGITTFFIAFVFAVYILLQKEKLGIQA 209 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + ++ + S G + AI G + L +P + + Sbjct: 210 KKVLFAFVRKGRAEAAMEVLSLTYNTFSSFLTGQCLEAIILGSMFVVTMTLFKLPYALLV 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++ A A+IP AV +L+ + F A + I I + P +VG Sbjct: 270 GIVIAFTALIPIFGAFIGCAVGAFLIFMVDPFKALIFVILFLILQQIEGNLIYPHVVGNS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + LP + + G MG++G+ I +++++ +++E + K+ Sbjct: 330 VGLPSIWVLAAVSIGGSLMGIVGMLIFIPIISVVYALFREIVYLKLRQKKINPKEL 385 >gi|52081609|ref|YP_080400.1| hypothetical protein BL02577 [Bacillus licheniformis ATCC 14580] gi|52786989|ref|YP_092818.1| YubA [Bacillus licheniformis ATCC 14580] gi|52004820|gb|AAU24762.1| hypothetical protein BL02577 [Bacillus licheniformis ATCC 14580] gi|52349491|gb|AAU42125.1| YubA [Bacillus licheniformis ATCC 14580] Length = 381 Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 120/342 (35%), Gaps = 5/342 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + ++ PV+ ++ + PI F+ K + ++ + ++ L + Sbjct: 42 FIFTPFIVLVETIALPVVLTGVVYYLLNPIVD-FLEWKNVKRIYSILLLYIVIIGLITIS 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + ++ LV V + + G + +++ + L Sbjct: 101 IVSVIPLLREQITSLVDNFPRYVHI---VEDQIKQLIGSQFFNQVQQTMNINLTDLASKL 157 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + G + + +SI+ + LF+ +DG + + L Sbjct: 158 SDQATTILNSTFTGVGTFIGAVT-EVVISIVTVPFILFYLLKDGKKLPLFILKLIPVRLR 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L ++ A +++P Sbjct: 217 EQTYVMMSEMNHRLSSYIRGQIIVSFCIGCLLFIGYMIIGLDYASLLALVAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + F L + + K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPFMLVKLIIVWTVVQLFEGKFISPQIMGKNLHIHPVTIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G++G+ + A+I V+ K+ N Sbjct: 337 TAAKLFGVIGVILAIPGYAVIKVVVTHLFEWFKQRSHLYEKN 378 >gi|298346059|ref|YP_003718746.1| integral membrane protein [Mobiluncus curtisii ATCC 43063] gi|298236120|gb|ADI67252.1| integral membrane protein [Mobiluncus curtisii ATCC 43063] Length = 487 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 11/298 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ K T A+I+ + + L + + L+ K + Sbjct: 105 PMHLRL-QKWHIPKTLSAIISLLVGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKAL- 162 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WLSD P + ++ + + + + + +S ++ Sbjct: 163 --AWLSDGPLKLDQEQIEKYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTT---- 216 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I+ + LFFF +DG I L + + + + ++A+ + Sbjct: 217 -ILISLFCLFFFLKDGRQIWIWLIRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVD 275 Query: 226 GLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFL 283 + + + G S L ++ I A IP ++ A+++ LL+ A + + Sbjct: 276 SVFISIGAAVLGAGSMTIPLALLIFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLI 335 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L P L+ + L L G+ G G++G + ++A + Sbjct: 336 VILAVQQIESNVLHPMLMSSAVNLHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTV 393 >gi|304390182|ref|ZP_07372136.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326664|gb|EFL93908.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 487 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 11/298 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ K T A+I+ + + L + + L+ K + Sbjct: 105 PMHLRL-QKWHIPKTLSAIISLLVGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKAL- 162 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WLSD P + ++ + + + + + +S ++ Sbjct: 163 --AWLSDGPLKLDQEQIEKYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTT---- 216 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I+ + LFFF +DG I L + + + + ++A+ + Sbjct: 217 -ILISLFCLFFFLKDGRQIWIWLIRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVD 275 Query: 226 GLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFL 283 + + + G S L ++ I A IP ++ A+++ LL+ A + + Sbjct: 276 SVFISIGAAVLGAGSMTIPLALLIFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLI 335 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L P L+ + L L G+ G G++G + ++A + Sbjct: 336 VILAVQQIESNVLHPMLMSSAVNLHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTV 393 >gi|229820773|ref|YP_002882299.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] gi|229566686|gb|ACQ80537.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] Length = 418 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 108/315 (34%), Gaps = 13/315 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F V AL++ P S V+A +S + F L ++ Y + Sbjct: 90 FIAVFLALVVTSVLEPFVSWLSRWMP--RAIATVVAMLSAIVFFAGLLTYVVYSVAGQWT 147 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + + S++P + A ++ +L + + Sbjct: 148 DLAKQFNDGIGQIFDLLEN-SNLPITITADDI--------NDWIETGRQWLVDHSGELAG 198 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + G +F + + + FF G + + + + Sbjct: 199 QVFANAGGVFEAFTI-LALGTFVTIFFLVSGARMWRWFLNELPSRSRLTVHGAAGAGWYT 257 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 G IIA+ +G++ + GVP L V+ I A IP + ++ + Sbjct: 258 FSGYARGTVIIAVIDGVLAYILLVIVGVPLAAPLAVLVFIGAFIPLIGAPAAMIIAAIVA 317 Query: 271 IKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + N F + G + V+ L+P ++G + L + G+ G GLLG Sbjct: 318 LAANGFWPAVIVTIGIAGIGQVEGHILQPLVMGKQVSLHPVVVALGVTAGTFLGGLLGAV 377 Query: 330 IGPVLMALIAVIWKE 344 I L+A+I ++ + Sbjct: 378 IAIPLIAVIWTVYSK 392 >gi|295399501|ref|ZP_06809483.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] gi|294978967|gb|EFG54563.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] Length = 372 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 126/344 (36%), Gaps = 12/344 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ + ++LY++ P + A I F P+ +K + V+ + + L Sbjct: 16 IAIVVLGAIALYYVSTVIYPFIIAFFIAFFINPLVDFLETKAKMPRWLAVVVTLIVLFAL 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGMWASELWTKHLSHP 130 + L + + L + V Q + IP + L+ + Sbjct: 76 VAGLVTLLIAEIVSGTQYLANVVPENFQKLVKYIETFFAQQIIPLYHDLAALFKNLDASQ 135 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-------SIIFMIIALFFFYRDGFS 183 Q + + + T + +F R IF ++A FF +D + Sbjct: 136 QDTIMNNIQAVGTQIATTVGQFTQRVLQNIPQLLTWLPNAATVFIFSLLATFFISKDWYR 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + + K++ + K + + +++ + GV + Sbjct: 196 LTGMVQKILPAKAHKSGKRVFLDLKKALFGFIKAQATLISITTVIVLIGLLILGVDYAIT 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +I ++ ++P G I F IY I GNI A L + I L + + + P ++ Sbjct: 256 IALIIGLVDILPYLGTGIVFVPWIIYAAISGNIPFAIGLGVLYIIVL-VQRQIMEPKVLS 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I L L T L G + +G LGL +GPV + +I + ++ Sbjct: 315 SSIGLDPLATLVALFVGFKLIGFLGLIVGPVTLVIIRTLHSANV 358 >gi|256785494|ref|ZP_05523925.1| integral membrane protein [Streptomyces lividans TK24] gi|289769390|ref|ZP_06528768.1| integral membrane protein [Streptomyces lividans TK24] gi|289699589|gb|EFD67018.1| integral membrane protein [Streptomyces lividans TK24] Length = 466 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 23/320 (7%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V ++AL+I P + A+ A + Sbjct: 94 LLVLAGTVWVLMRVISAVQLVVLAFVAALLITALLQPAVAWLRRHGVPRGPATALTAILG 153 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLS 128 + + + ++ ++ E + + Q GI R WL + P + ++ + Sbjct: 154 FVV-----MGLIGWFVTWQVMENIDNLSDQVQDGIDELRNWLLNSPFHVTDKQINEIAKN 208 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ ++ + ++ I+ + F DG I Q Sbjct: 209 LRDAVGANTDQITSAGLEGV---------TVVVEALTGILLAAFSTLFLLYDGKRIWQWS 259 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 260 LKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFI 319 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + A+++ + L+ +F A + I L+PF++G +++ Sbjct: 320 FLFAFIPLVGAVVSGALAVVVALVTQGVFAAVMTLVVVLAVQQIEGHILQPFILGRAVRV 379 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 380 HPLAVVLSVAAGGMVAGIGG 399 >gi|261885879|ref|ZP_06009918.1| acid membrane antigen A [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 281 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 86/221 (38%), Gaps = 12/221 (5%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + +A ++ + I F+++ LFF + + + + + I V Sbjct: 63 VLSYAKGSLEKSANFLIDISFIMLFLFFSHFYANFFKSYIKKVSP-IAKYELEAIFSEVA 121 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 + F I +G + G + GV+ A ++IP G + + +S+ Sbjct: 122 NTMSVVFYSTIANMILQGFLFAIIASFYGFDG-LLFGVLFAFSSLIPVVGGALVYIPLSV 180 Query: 268 YLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF--------LVGGPIKLPFLPTFFGLVG 318 + G+ A + ++ + + + D ++P L+ P K+ L FF ++ Sbjct: 181 FEFSLGDTKAAIIILVYSIVVISTLADNFVKPLVIKFINEKLLKTPAKMNELLIFFSMLA 240 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ + G G+ +GP ++ L++ + M + + + Sbjct: 241 GLSSFGFWGIVLGPAIVTLLSATLRVYAMLKSSDLDSKAKE 281 >gi|219853032|ref|YP_002467464.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219547291|gb|ACL17741.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 345 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 122/362 (33%), Gaps = 26/362 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + +I I + + + A+ + P++ F + + Sbjct: 1 MEISGISEDQKLSLLIGAIFIAVIIAFWPLMTVFVWAVALAVALMPLHKRFSRRV--KPS 58 Query: 61 FLAVIATVSVMCL--FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A++ T V+ + +V + Y +E +++ ++ +L Sbjct: 59 LSAMLITFGVILVTGLVVSSATIVIYADIEYIGVMAATLVKGFSRTVFATFLPTFTADQL 118 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + I+ + L +I + + L Sbjct: 119 SN--------------------MPHTLIEMVLNTLLSLTANPGLLLLQVIILFLTLSMLI 158 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G I + +IS I I S + A+ L+ + L G Sbjct: 159 YYGEQIWTSVTRNLSPKLSTVLGRISEITGNTIYSLIVIQISAALLSFLLAIPFFTLLGY 218 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTL 296 + + +IP GA + +Y++ G+I +A +F+ + +D Sbjct: 219 GHELLFATMIGFAMLIPLVGAQLCLLFFILYMIALGDIRSAVITMFIGYPLLSGWIDFYY 278 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 RP ++ + + + G+ GV MG++G +GPVLM+L + I + E+ Sbjct: 279 RPVMMRRRVAVHPVFMIIGIFAGVPFMGIVGFILGPVLMSLAVTGYSIYIEQTRVPAEEQ 338 Query: 357 SS 358 S Sbjct: 339 ES 340 >gi|260549333|ref|ZP_05823553.1| permease [Acinetobacter sp. RUH2624] gi|260407739|gb|EEX01212.1| permease [Acinetobacter sp. RUH2624] Length = 397 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 125/326 (38%), Gaps = 18/326 (5%) Query: 28 KGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-L 81 K P L A + + P+ S F+ + T++V ++VPL++ Sbjct: 26 KPVVIPFLGAFFLAYLFSPLVDVLVKIKLPRWLAISIVFIGIGVTLTVALWYLVPLIWKQ 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + + + W+S ++ +++ +T Sbjct: 86 LVYARDSIPAGIHWINAE------LLPWISST---FHVQQMEIDTDQMSKAVMDYVQTNY 136 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + ++ G+ F+ +++ + I F+F D + Q L L + A Sbjct: 137 SADSIQAVLLKLAQSGLNFIQIGGTLVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTL 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I R V+ + G ++ + G+V L G+ + +G++ + ++IP Sbjct: 197 QIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAV 256 Query: 262 --FTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 A+ L G + + + + I + L+PFL+G I L + F ++ Sbjct: 257 GIIAAIIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLA 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKE 344 G + G LG+ I + A+I V+ K Sbjct: 317 GAQLAGFLGMLIALPVAAVIVVLLKH 342 >gi|88800192|ref|ZP_01115760.1| hypothetical protein MED297_13882 [Reinekea sp. MED297] gi|88777038|gb|EAR08245.1| hypothetical protein MED297_13882 [Reinekea sp. MED297] Length = 368 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 125/354 (35%), Gaps = 7/354 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++ I + +Y G P+L+A+I+ + P+ S + +I Sbjct: 19 DEEAVIVFLLFLICFILIYMFGGILTPLLAAVILSYLLSPLVDKLQSYRVPH-GLSVIIV 77 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + +V LL + + ++ LVS V + L + + + EL Sbjct: 78 FLVFFGVLLVSLLTMVPALIKQISALVSDVPGMMRTFQSQLELLPEKYPDLLSQELVGHW 137 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +I + + + + F+ + + +I + + +FF +D + Sbjct: 138 SGSLDLSQIGQQL---SAWLPNVVSFSLNTLPAIISVLIYVIVVPLMVFFILKDRDELWS 194 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S+ +I+ + + I + G I I G V + L G+ L V Sbjct: 195 GFKSMLPD-QRRLMNEIAIEMNQQIANYIRGKAIEIIIVGGVTFITFTLLGLNYAALLSV 253 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGP 304 + +IP GA + V + + L + + ++D L P L Sbjct: 254 LVGFSVLIPYIGATVVTIPVFAIGVFQWGFAPELYWVLIAYLVIQVLDGNVLVPLLFSEA 313 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L L+ I ++ + + + Sbjct: 314 VNLHPVSIIAAVLVFGGLWGFWGIFFAIPLATLVKAIVNAWPSSVISDPTEPAD 367 >gi|15673164|ref|NP_267338.1| permease [Lactococcus lactis subsp. lactis Il1403] gi|12724148|gb|AAK05280.1|AE006350_7 permease [Lactococcus lactis subsp. lactis Il1403] Length = 313 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 106/290 (36%), Gaps = 3/290 (1%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASEL 122 V+ + + + + + + + V + H + + ++ + + Sbjct: 9 VVTIIVLFLIIAALIAWGLIVAIPNIISGVDNFASSVPHYVNTAQKEINALAKNPHFEQF 68 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + +S+ + K ++ + S +S+I LF+ RDG Sbjct: 69 RPQVDQFAKSIGNQLIDWSKAFSVNAVTTL-SHLISKTTSILISLIVFPFVLFYLLRDGQ 127 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L + + K+ + + + G ++AI ++ + G+ V Sbjct: 128 RLNGFVTHLLPNDWRKETSKVLHEINSQLSNYVRGQVLVAIAVAIMFMIGLPIIGLRYAV 187 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 AL + + ++P G+ ++ + I L+ G + + IE + + + P ++ Sbjct: 188 ALAITAGFLNLVPFLGSFLAAIPMVIVGLVIGGPLMLVKVIIVLIIEQTLEGRFISPLVL 247 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G + + + F L+ + +G+ G+ + A + VI +E Sbjct: 248 GKQMSIHPITILFVLLTAGQILGVWGVLLAIPFYATLKVIIVHVYEWYRE 297 >gi|323487957|ref|ZP_08093213.1| hypothetical protein GPDM_01390 [Planococcus donghaensis MPA1U2] gi|323398381|gb|EGA91171.1| hypothetical protein GPDM_01390 [Planococcus donghaensis MPA1U2] Length = 360 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 113/330 (34%), Gaps = 13/330 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS-VMCLFIVPLLFLFYYGMLEM 89 F P+L ++ + + P+ + + +K + AV+ + ++ +F + + + ++ Sbjct: 41 FVPLLLGGVLFYLTRPVLNFLMKRKF--PKWAAVLTVLLSIILVFYLFFIMIGPIVTDQI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV Q +++ D L + L G + Sbjct: 99 NALVDNAPEIIQSVEESAQYIFD-----QRERLPDSIEEQLNGMTGQIGDRLGDVGGWVV 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F+ ++++ + L + D + + +K + Sbjct: 154 -----SFIGSFVSGIITLVLVPFFLVYLLVDHKKFVPFVSGFFSGERKGWIRKTLHDIDD 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +++ G ++ G++L Y + G+ + L +I +IP P +I + Sbjct: 209 TLQAYIQGQLFVSFLVGIMLLIGYLIIGLDYALLLALIGMATNVIPFLGPYIAVVPAILI 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + A + + + I + P ++G + + L ++ GL G+ Sbjct: 269 ALVEDPIKAVYVGIIMLVAQQIESNFITPNVMGKSLDVHPLTVITLILAAGNIAGLWGII 328 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + A+I I K E + + + Sbjct: 329 LAIPVYAVIKTIAKNVYARRIEIRNTATRD 358 >gi|88854466|ref|ZP_01129133.1| putative integral membrane protein [marine actinobacterium PHSC20C1] gi|88816274|gb|EAR26129.1| putative integral membrane protein [marine actinobacterium PHSC20C1] Length = 383 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 1/174 (0%) Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 LFFF +DG +I + + +I R + + G I+A + + +G+ Sbjct: 187 ILFFFLKDGDNIWEFFLRPMHGVRRERGHRIGRTAVRTLGGYVRGTAIVAAVDAVGIGAG 246 Query: 233 YWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + VP + L VI + A IP GA ++ ++ L+ A + + + Sbjct: 247 LLILQVPLALPLAVIVFLGAFIPLVGATVAGILAALIALVTNGWVVALIVLGIVVLVNQL 306 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+P ++ + + L L G G++G + + A+ I K Sbjct: 307 EGNLLQPVVMAQSLSIHPLVILVALTAGTILGGIVGAVLSVPIAAVGWSIIKTW 360 >gi|220908099|ref|YP_002483410.1| hypothetical protein Cyan7425_2702 [Cyanothece sp. PCC 7425] gi|219864710|gb|ACL45049.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 358 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 120/345 (34%), Gaps = 22/345 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ ++R+++ + L L + A I+ F Sbjct: 26 ISTNALVRFLLFAAVGWVLVQLINHFQYVIFVFAFAAILAILLNYPVQYLKGFLPRR--F 83 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + L + +++++ + + + S Sbjct: 84 ALGIVVLLSLAAIFFLALGIGVTIADQLQDIAATLTQTITSLQTPLNQVQAFLNQRNISL 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + QSL ++L + + + +++I +++ FF D Sbjct: 144 DLSPLQQQLQSLVFNGASWLVSYIPTLLGSY------------VTLIIVLVITFFMLIDE 191 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ Q + L A + R V + + G +I+ GL + + +P Sbjct: 192 GNLWQFILRLVPQ---AQRDRFDRSVHRSFQGFIRGQLLISFLLGLATYIVFVIFRLPFA 248 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L ++ A+ +IPG GA + T + +L++ + A + I + D L P + Sbjct: 249 LVLSMVVAVFDLIPGIGATLGVTLACLIVLLQSGWWVALQVLAICVILQQLQDNLLAPRI 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + ++L L FF L+ G + GLLG+F+ + I + Sbjct: 309 MQSTVRLHPLVVFFALLVGTQIAGLLGVFLAVPVAGAIVSFLQIE 353 >gi|190891171|ref|YP_001977713.1| putative permease protein [Rhizobium etli CIAT 652] gi|190696450|gb|ACE90535.1| putative permease protein [Rhizobium etli CIAT 652] Length = 374 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 104/326 (31%), Gaps = 11/326 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S V Sbjct: 10 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATVG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F + L+ L + + + ++ + W Sbjct: 69 ILIAFVIVFALALMILIPVLISQFNDFAERLPGYISQLQQFITQTQNSLLPDWVKSQAGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 IKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++I++ + + I G + + G+ + L G+ + +G Sbjct: 184 SKVDQWIPRDYVGDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +++ IP + V+I + L ++ + F+ L+P LV Sbjct: 244 LFAGMISFIPYVGSLVGLILAVGVAIVQFWPDYPWIGLVLAVFFSG-QFLEGNILQPKLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L G +G Sbjct: 303 GSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|154253766|ref|YP_001414590.1| hypothetical protein Plav_3329 [Parvibaculum lavamentivorans DS-1] gi|154157716|gb|ABS64933.1| protein of unknown function UPF0118 [Parvibaculum lavamentivorans DS-1] Length = 365 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 115/312 (36%), Gaps = 9/312 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + Q I+ + + + + L+ LKG P ++ + I + P+ S S A Sbjct: 2 TIQRQAIIWALFIALFVAGLWLLKGILLPFVAGMAIAYFLDPLADKLESY--GLSRLAAT 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V L + +L + + +L++ V + WL I G L Sbjct: 60 GMITIVFLLLAIVMLIVLVPVLYN--QLIALVEIFPALMRRGQEWLLTIGDGRLGRLLGV 117 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + Q+++ L + + I G+ + I+ + F+ D + Sbjct: 118 EGQDVEQAIRQSLGGSL--DWLVNILTSVGSQGLQIVALLSLIVVTPVVAFYLLLDWDRM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++D+L ++++R + +V+ G I+ + G + L G+ + + Sbjct: 176 VERVDALLPRDHAETIRRLAREINEVLAGFIRGQVIVCLVLGTIYAVGLTLVGLRFGLIV 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ I++ IP I V + L + + + AI FI L P LV Sbjct: 236 GIVAGIISFIPYLGTILGFVVGLALALFQFGTDFVQVGMVIGVFAIGQFIEGNFLSPKLV 295 Query: 302 GGPIKLPFLPTF 313 G +KL + Sbjct: 296 GDRVKLHPVWVM 307 >gi|306817850|ref|ZP_07451589.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|304649329|gb|EFM46615.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] Length = 478 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 114/329 (34%), Gaps = 17/329 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F ++ L+ + F P AL + T P+ I +K A+ A ++++ +F V Sbjct: 85 FAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLIRRKVP----AALAALLNIVLMFAV- 139 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ML + +++ + A +P + I L K Sbjct: 140 --------MLGVTGMIAGALTAVTTELPRYQRKFQILYQDSI-HLLEKLGDRFNIDMSSV 190 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + +A ++ + + F D + ++ L + Sbjct: 191 TSPAQRVDLGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELATYAPG 250 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 R + R FL T G ++ ++ VPS + G++ + IP Sbjct: 251 LAIS--LRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILAFVANYIPAV 308 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G IS + +L+ + A + + + +V ++P G + L +F L Sbjct: 309 GFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGLNPTISFLSL 368 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + +G LG + + I I+ +S Sbjct: 369 MVWSAVLGPLGAVVSVPMTLFIKAIFVDS 397 >gi|241203977|ref|YP_002975073.1| hypothetical protein Rleg_1242 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857867|gb|ACS55534.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 374 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 104/327 (31%), Gaps = 11/327 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L Q + + LY P ++ + I + P+ + S + Sbjct: 9 ILKRQIFFWLAALVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATI 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V+ + +F + L+ L + + + ++ + W Sbjct: 68 GILVAFVIVFALALMILIPVLISQFNDFAQRLPGYISQLQQFITQAQNSLLPDWVENQMG 127 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + FL + G +D ++ + F+ D + Sbjct: 128 AIKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRM 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++D + + ++I++ + + I G + + G+ L G+ + + Sbjct: 183 VAKVDQWIPRDYVSDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAVGLSLVGLNFGLLI 242 Query: 245 GVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+ +++ IP + V++ + L ++ + F+ L+P L Sbjct: 243 GLFAGMISFIPYVGSMVGLVLAIGVALVQFWPDYPWIGLVLVVFFSG-QFLEGNILQPKL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLG 327 VG + L + F L G +G Sbjct: 302 VGSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|310829537|ref|YP_003961894.1| hypothetical protein ELI_3987 [Eubacterium limosum KIST612] gi|308741271|gb|ADO38931.1| putative membrane protein [Eubacterium limosum KIST612] Length = 392 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 97/307 (31%), Gaps = 5/307 (1%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 +++ V+ + + L + F+ ++ L++K W++ + Sbjct: 79 REKGKRAAAIVLTFIFIGLLITGVVTFVIPQLQKSVEMLITKFPGY---VASFNLWVNQV 135 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + E LS + + I ++ + I + Sbjct: 136 LEWLHLPEDAWNQLSSQWQDLFPKISSGLIGAMPEIVNTTVSITQGVFNFLMGFIISVYM 195 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L R + + + A+ ++ + G A G + + Sbjct: 196 LADKERLLALKDKLMYAYIPDKARAFINEVGHTANQTFHGFIAGQITEAFILGTLCAAGL 255 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + VP + +GV+ + ++IP GA + + LL+ ++ + Sbjct: 256 AILRVPYALLIGVLVGVTSIIPIFGAFLGAVPSGLILLVV-KPVYCLIFIIYIICLQQVE 314 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P +VG + + L G++ G G G+ +G A++ + + A Sbjct: 315 SNVIYPKVVGTSVGISGLWVLIGMLLGGSFFGFTGMILGIPGFAVLYSVVRTLTNARIAR 374 Query: 353 KEKISSN 359 K+ N Sbjct: 375 KQAAKQN 381 >gi|294496279|ref|YP_003542772.1| hypothetical protein Mmah_1631 [Methanohalophilus mahii DSM 5219] gi|292667278|gb|ADE37127.1| protein of unknown function UPF0118 [Methanohalophilus mahii DSM 5219] Length = 364 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 122/341 (35%), Gaps = 22/341 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + L + L ++ L+ + PIY K + Sbjct: 18 KILALLAFFILFLALVKILLPLADGIVLGLVFAYICRPIYDKINKKNHYGAFIA------ 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHL 127 + PL+ + G +E+ + V+ + + ++ I G + + Sbjct: 72 --TMFIVTPLVIIIGTGFVEIFRQLIWVIENQSQVLEIIFDFIRAILPGTYFERV----- 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q + S + L G +A GM + ++++ I +F +G + Sbjct: 125 --NQLVWDSSLSILSFAGSLGFVSYAKSLGM----FMINLVVAIFVCYFLLLEGEKLYAS 178 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + R + +++ F+G A+ + ++ G+ +AL + Sbjct: 179 AVCIAPKGTQLNTGRYLRELDRILSGIFIGNAYAALTVSTISVVVFYAFGLSHILALATL 238 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPI 305 I ++IP A + +S+ I+ A F+ +I +++ + LRP+ V Sbjct: 239 IFIASVIPFFAGYMVLLILSVIRYIEMGAEAAIIFFIVSSIVIYVPPELFLRPYFVSMKS 298 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ + +GG G+ G F PVL+ + ++ I Sbjct: 299 QIHPVVLVVVFLGGGFVGGIAGFFAAPVLLGALVAAYRVYI 339 >gi|317129913|ref|YP_004096195.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315474861|gb|ADU31464.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 370 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 103/300 (34%), Gaps = 12/300 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P L LII P + +K + + ++ V + F + L + + Sbjct: 33 YLYPFLIGLIISLIFLPAVNFIENKFGWNRSSAVLLIIVFFILTFSALITLLVAEIVAGL 92 Query: 90 KELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L ++ GI D +P ++ Q+ S L +N Sbjct: 93 SYLTKELPTYIHDGIEFIHLWFDTYLLPIYEGLIAFSSQLDPGQQTTIHQSLERLLSNFG 152 Query: 147 DFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + F D+ +++ F ++ FF +D ++ Q L+S Sbjct: 153 EQMSNIIQYVLNGFADFLMALPNTITVLFFALLGAFFITKDWPTMMQWLESKTPKKIKVI 212 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 +++ K I I+ G+++ + GV + ++ AI+ ++P G Sbjct: 213 ANRMTEQWKKAIVGYVFAQLILVSMTGVIVFIGLLIIGVDYAITTALLIAIVDLLPYLGT 272 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + F +Y G+ A L + AI + I P ++ + +P L L Sbjct: 273 GLVFIPWILYTFFSGHWGLAIGLSILYAIVI-IQRNLAEPKVMSKHMGIPPLALLVSLFA 331 >gi|256784808|ref|ZP_05523239.1| hypothetical protein SlivT_09978 [Streptomyces lividans TK24] Length = 439 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 115/358 (32%), Gaps = 16/358 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + +I L S F L G VL A + P S + Sbjct: 38 MPRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINVLIAFFLALAIEPAVSWMAGR-GMR 96 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 F + ++V+ + L ++ ++V + + + G + Sbjct: 97 RGFATFLVFLAVLIAAAGFVTLLGSMLAGQIVKMVEEF-------PDYLDSVINWVNGHF 149 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +EL + +++ + + A G +F ++ +++ F+F Sbjct: 150 HTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLF-----QLLTVLLFSFYFA 204 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + L S+ A + I ++A+ G+ + V Sbjct: 205 ADGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYILLEILEV 264 Query: 239 PSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P AL V +++ IP A+ + + N + A + ++ I + L+ Sbjct: 265 PYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQ 324 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L + + F ++ G +G +G I +A + + + Sbjct: 325 PKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 382 >gi|312109941|ref|YP_003988257.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] gi|311215042|gb|ADP73646.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] Length = 372 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 126/344 (36%), Gaps = 12/344 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ + ++LY++ P + A I F P+ +K + V+ + + L Sbjct: 16 IAIVVLGAIALYYVSTVIYPFIIAFFIAFFINPLVDFLETKAKMPRWLAVVVTLIVLFAL 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGMWASELWTKHLSHP 130 + L + + L + V Q + IP + L+ + Sbjct: 76 VAGLVTLLIAEIVSGTQYLANVVPENFQKLVKYIETFFAQQIIPLYHDLAALFKNLDASQ 135 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-------SIIFMIIALFFFYRDGFS 183 Q + + + T + +F R IF ++A FF +D + Sbjct: 136 QDTIMNNIQAVGTQIATTVGQFTQRVLQNIPQLLTWLPNAATVFIFSLLATFFISKDWYR 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + + K++ + K + + +++ + GV + Sbjct: 196 LTGMVQKILPAKAHKSGKRVFLDLKKALFGFIKAQATLISITTVIVLIGLLILGVDYAIT 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +I ++ ++P G I F IY I GN+ A L + I L + + + P ++ Sbjct: 256 IALIIGLVDILPYLGTGIVFVPWIIYAAISGNVPFAIGLGVLYIIVL-VQRQIMEPKVLS 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I L L T L G + +G LGL +GPV + +I + ++ Sbjct: 315 SSIGLDPLATLVALFVGFKLIGFLGLIVGPVTLVIIRTLHSANV 358 >gi|229075334|ref|ZP_04208327.1| hypothetical protein bcere0024_30750 [Bacillus cereus Rock4-18] gi|228707885|gb|EEL60065.1| hypothetical protein bcere0024_30750 [Bacillus cereus Rock4-18] Length = 376 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKEQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVANIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPVIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIVLAIPGYAILKVL 364 >gi|328554360|gb|AEB24852.1| permease [Bacillus amyloliquefaciens TA208] Length = 353 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 114/318 (35%), Gaps = 15/318 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +K F P+ A+ I + PI K T+S++ ++ + + + Sbjct: 37 LVIKSLFIPIFIAVFIAYLLLPITEWLHGKGMPR--------TLSLLLIYFLFFGGIGWG 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L+ ++ ++ + + + L P + + ++ Sbjct: 89 VYKGVPVLIEQLQDLSESIPGLAENYNSM-----LRHLHNHTDHWPDGMHHRMDKMIQQT 143 Query: 145 GIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 S I DY L + +F+ +D ++ + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVFDYILIAATIPFLVFYMVKDIDAMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL+ G ++W+ G+P + LG++ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGLIAGCSFWMFGLPYPLILGLVIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPTLLLALALSAKAVIIVIITIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAV 340 G+ G+ + A++ V Sbjct: 324 AGIPGMILAVPAAAVLKV 341 >gi|21224113|ref|NP_629892.1| hypothetical protein SCO5767 [Streptomyces coelicolor A3(2)] gi|2687332|emb|CAA15873.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 402 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 115/358 (32%), Gaps = 16/358 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + +I L S F L G VL A + P S + Sbjct: 1 MPRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINVLIAFFLALAIEPAVSWMAGR-GMR 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 F + ++V+ + L ++ ++V + + + G + Sbjct: 60 RGFATFLVFLAVLIAAAGFVTLLGSMLAGQIVKMVEEF-------PDYLDSVINWVNGHF 112 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +EL + +++ + + A G +F ++ +++ F+F Sbjct: 113 HTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLF-----QLLTVLLFSFYFA 167 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + L S+ A + I ++A+ G+ + V Sbjct: 168 ADGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYILLEILEV 227 Query: 239 PSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P AL V +++ IP A+ + + N + A + ++ I + L+ Sbjct: 228 PYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQ 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L + + F ++ G +G +G I +A + + + Sbjct: 288 PKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|42782433|ref|NP_979680.1| hypothetical protein BCE_3380 [Bacillus cereus ATCC 10987] gi|42738358|gb|AAS42288.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 376 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|332043622|gb|EGI79817.1| protein of unknown function UPF0118 [Lacinutrix algicola 5H-3-7-4] Length = 363 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 124/343 (36%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+L LY ++ A + A +I P+ K + + T + + + Sbjct: 20 IVILLWFLYTIQSVIAYLAIAGVISLIGRPLVIFLKRKLKFNDTVAVITTMFLFILVIAA 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + L + Q I + + + + + Sbjct: 80 IIGMFIPLAIEQGQNLSLLNIDQLQTNIENL--------YQEFIQHFNLNKTDVEESIKD 131 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S+ F K N FIP F + F + + + ++ FFF +D + ++ Sbjct: 132 SKVFSKLN-FGFIPNFLNAVVTGFGSFSIGLFSVLFISFFFLKDSNLFGSSILTIFPKAQ 190 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + KK + ++ F G+ + + + + G+ + V + + A++ +IP Sbjct: 191 ESRIKKSFITIRDLLSRYFGGLLLQLLILFTIYSIVLLIFGIENAVIIASLCALLNIIPY 250 Query: 257 GAPISFTAVSIYLLIKGNIFNA--------TCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 PI + I L + N+ + T + G I +VD +PF+ +K Sbjct: 251 VGPIISGVLIILLTMSSNLGQSFSDVILPKTMYVMIGFIVAQLVDNFFSQPFIFSKSVKS 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G++GL I L + VI KE + + Sbjct: 311 HPLEIFIVIIIVGLLFGIVGLIIAVPLYTALKVIAKEFLSEYR 353 >gi|21223403|ref|NP_629182.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|9967657|emb|CAC05875.1| putative integral membrane protein [Streptomyces coelicolor A3(2)] Length = 465 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 23/320 (7%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V ++AL+I P + A+ A + Sbjct: 93 LLVLAGTVWVLMRVISAVQLVVLAFVAALLITALLQPAVAWLRRHGVPRGPATALTAILG 152 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLS 128 + + + ++ ++ E + + Q GI R WL + P + ++ + Sbjct: 153 FVV-----MGLIGWFVTWQVMENIDNLSDQVQDGIDELRNWLLNSPFHVTDKQINEIAKN 207 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ ++ + ++ I+ + F DG I Q Sbjct: 208 LRDAVGANTDQITSAGLEGV---------TVVVEALTGILLAAFSTLFLLYDGKRIWQWS 258 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 259 LKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFI 318 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + A+++ + L+ +F A + I L+PF++G +++ Sbjct: 319 FLFAFIPLVGAVVSGALAVVVALVTQGVFAAVMTLVVVLAVQQIEGHILQPFILGRAVRV 378 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 379 HPLAVVLSVAAGGMVAGIGG 398 >gi|328884744|emb|CCA57983.1| putative integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 480 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 110/318 (34%), Gaps = 19/318 (5%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSV 70 + + +++ L + V + A + + + + +K + VS Sbjct: 114 LLVFAGTVWVLMKVISSVQLVVLAFVAALLVTALLQPTVALLRRKGLPRGLATAVTAVSG 173 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + L +V + + RWL D P + ++ Sbjct: 174 FVVMGLVGWFVVWQVMDNIDTLSDRVKDGIEE---LKRWLLDSPFHVTEQQI-------- 222 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + N I + + ++ I+ + + F DG + + Sbjct: 223 NDIAKNLSDTIGANAEQ-ITSAGLQGVTVVVEAMTGILLAMFSTLFLLYDGKKVWEWTLK 281 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + G ++A+ + + +G W VP V L V + Sbjct: 282 LVPAQARPGVAGAGPRAWRTLTAYVRGTVLVALIDAVFIGLGLWFLEVPMAVPLAVFIFL 341 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 342 FAFIPLVGAVVSGALAVVVALVTNGVFTALMVLVVVLAVQQIEGHVLQPFILGRAVRVHP 401 Query: 310 LPTFFGLVGGVRTMGLLG 327 L + G T G+ G Sbjct: 402 LAVVLAVAAGGLTAGIGG 419 >gi|327481531|gb|AEA84841.1| transporter, putative [Pseudomonas stutzeri DSM 4166] Length = 365 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 120/334 (35%), Gaps = 14/334 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + +Y L P L +++ + P+ + V+ +F + Sbjct: 15 LLLCIWLVYLLTPILTPFLIGVLLAYLGDPLVDRLERWGLSRTW--------GVIAVFAL 66 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-WTKHLSHPQSLKI 135 L L ++ + L ++V Q WL + ++ + LK Sbjct: 67 FSLLLLVLLLVLVPMLGKQLVRLYQLAPLALDWLQHVALPWVQTQFGLEDNFWQLDRLKA 126 Query: 136 LSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + + I A+ + L + +++ + + F+ RD I +L SL Sbjct: 127 AFTAHLGSTTDVLGMILSRATASSLALLAWIGNLLLIPVVSFYLLRDWDLIMLKLRSLLP 186 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +VI + G ++ + ++ S L G+ + +GV+ + ++ Sbjct: 187 RKREGMVVRLMSECHEVIGAFLRGQLLVMLALAIIYASGLMLVGLELGLLIGVLAGLASI 246 Query: 254 IPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + ++ + + + + + + L P LVG I L + Sbjct: 247 VPYMGFVVGIGAAVIAALFQFGLAPYPLIGVAVVFTVGQMLEGMLLTPLLVGDRIGLHPV 306 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G + G G+ + + A+I V+ + Sbjct: 307 AVIFAVLAGGQLFGFTGVLLALPVAAVIMVLLRH 340 >gi|313890047|ref|ZP_07823682.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121408|gb|EFR44512.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] Length = 393 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 135/361 (37%), Gaps = 21/361 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN + ++ ++ +I V ++ FL P++ + I+ + + P+ Sbjct: 18 ILNNKAVVSLFVLLLIFVIIFVFTKISFLFASLGSFLTILMLPLVISTILYYLTKPLVDG 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + +T +A++ ++CL + L ++ ++ + L Sbjct: 78 IENLGPNRTTSIAIVF-ALILCLLVWAFASLIPMIGNQITTFIADLPKYIGTVNKEANKL 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + +++ I N ++ FAS I + +S + Sbjct: 137 LENDWLVSYRTELQDMVTNISKKAIDYAETFSKNAFEWAGSFASAIARITVSIIISPFII 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +F RD + L ++ ++ + K + G +AI G + Sbjct: 197 F----YFLRDSSKMKDGLVNVLPTKVRVPISRVLGDINKQLAGYVQGQVTVAIIVGFMFA 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + L G+ + ++ ++ M+P G+ ++ V I L++G + L ++ IE Sbjct: 253 IMFSLVGLKYSITFAIVAGVLNMVPYLGSFLAMVPVVIMALVQGPLMLVKVLLIF-TIEQ 311 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P ++G + + + F L+ G+ G+F+ + A + VI KE Sbjct: 312 TIEGRFVTPLVLGNKLSIHPITIMFLLLTSGAMFGVWGVFLIIPIYASLKVIVKELFDWY 371 Query: 350 K 350 K Sbjct: 372 K 372 >gi|302386088|ref|YP_003821910.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] gi|302196716|gb|ADL04287.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] Length = 379 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 120/345 (34%), Gaps = 7/345 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---ESSTFLAVIATVSVMCLFIV 76 ++ + + GF +P L+ ++ F S + ++++ + V Sbjct: 31 LIAMVMKVIGFISPFLAGGVMAFILNVPMRRIEKMLPVKEGSRIRRPLSLCLTLVFVIGV 90 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL +F + L+S V + + + Sbjct: 91 LLLVIFVVMPQLFETLISLQNSIPAFLAGVKEEAERLFAQNPEIADSISGIQIDWKAFLE 150 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S + G + M ++ + + ++ + ++S+Q L + Sbjct: 151 SVVGFLSTGAGSVLSSTVSAAMSIINGVTTFVIALVFAVYILLQKETLSRQFQKLMKAFL 210 Query: 197 PA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 P +I + + + G + A+ G + + +P + +GV+ A A Sbjct: 211 PEGVMARTLEILTLASETFSNFLTGQCLEAVILGSMFFFTLSVFRLPYGLLIGVLIAFTA 270 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP A+ +L++ +A + + + + P +VGG + LP + Sbjct: 271 LIPMFGAFIGCAIGAFLMLMVKPLDAVVFLIIFFVLQQLEGNFIYPHVVGGSVGLPSIWV 330 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G MG++G+ I L +++ I +E++ E +++ Sbjct: 331 LVAVTIGGSAMGIVGMLIFIPLSSVLYAILRETVNGRLERNKRLK 375 >gi|15888479|ref|NP_354160.1| permease [Agrobacterium tumefaciens str. C58] gi|15156177|gb|AAK86945.1| permease [Agrobacterium tumefaciens str. C58] Length = 385 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 114/327 (34%), Gaps = 9/327 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T L Q ++ + ++ L P ++ + + + P+ + S Sbjct: 8 TSLRRQVFFWIGVLAVFVLFLMVFSSILLPFVAGMALAYFLDPVADWLERR-GLSRLMAT 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ VS + +F + L+ + + + E ++++ + W S Sbjct: 67 VVILVSFVLIFALSLIIIIPLIVAQASEFITRIPQYISSLQQLIAGADTNLLPDWVSGQI 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L F+ T + G +D ++ + F+ D Sbjct: 127 NSVKENFSKLLTEGAGFIGT-----LLTQIWNSGKSLVDVLSLLVVTPVVAFYLLLDWDR 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++DS + ++I+R + K I G + + G+ L G+ + Sbjct: 182 MIDKVDSWIPRDYVHTVRQIARDMDKTIAGFVRGQGSLCLILGVYYAVGLSLVGLNFGLL 241 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE---LFIVDKTLRPFL 300 +G+ + +++ IP + +++ + I + +FL + FI L+P L Sbjct: 242 IGLFSGLISFIPYIGSMVGLILAVGVAIVQFWPDYIYVFLTLVVFFSGQFIEGNILQPKL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLG 327 VG + L + F L G +G Sbjct: 302 VGKSVGLHPVWLMFALFAFGALFGFVG 328 >gi|23008271|ref|ZP_00049786.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 125 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 52/121 (42%), Positives = 75/121 (61%) Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 Y LAGVP V G ITA+ AMIP GAP++F ++ LL G + A + G + F+ Sbjct: 1 YALAGVPHPVLFGAITAVAAMIPFGAPLAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVA 60 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D +RP L+GG +LPFL G++GGV T GLLGLF+GP +MA + ++W++ + +E Sbjct: 61 DHFVRPVLIGGTTRLPFLWVLLGILGGVETFGLLGLFVGPAVMAALILLWRDFTGSPEER 120 Query: 353 K 353 Sbjct: 121 P 121 >gi|229156954|ref|ZP_04285035.1| hypothetical protein bcere0010_31380 [Bacillus cereus ATCC 4342] gi|228626444|gb|EEK83190.1| hypothetical protein bcere0010_31380 [Bacillus cereus ATCC 4342] Length = 376 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 103 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGVILAIPGYAILKVL 364 >gi|194015659|ref|ZP_03054275.1| YubA [Bacillus pumilus ATCC 7061] gi|194013063|gb|EDW22629.1| YubA [Bacillus pumilus ATCC 7061] Length = 380 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 124/333 (37%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + +K P++ ++ + PI + + K F ++ + ++ + V Sbjct: 42 FIFTPLIVLVKTIALPIILTGVVYYLLNPIVN-LLEKFRVKRIFSILLLYIVIIGIITVT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + +M L + V + + G + ++ K ++ S + Sbjct: 101 IVSIIPFLQAQMMSLFHNLPKYVDT---VEDQIRQLTGSNFINQA-QKAMNFNVSELVSK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + T ++ F + +SI+ + LF+ +DG + + F Sbjct: 157 ASSQATKILESTFTGVGTFLGALTEVIISIVTVPFILFYLLKDGKKLPDYFLKFIPNKFR 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S LG I++ G++L Y + G+ L +I A +++P Sbjct: 217 EHTHIVLHEMNHRLSSYILGQIIVSFCIGVLLLIGYMIIGLDYAFLLAIIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIVIALVTSPIMLLKLIIVWTVVQLIEGKFISPQVMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++G+ + A++ VI K Sbjct: 337 TAGKLFSVVGIIVAIPTYAVLKVITTHLFDWFK 369 >gi|29829776|ref|NP_824410.1| integral membrane protein [Streptomyces avermitilis MA-4680] gi|29606885|dbj|BAC70945.1| putative integral membrane protein [Streptomyces avermitilis MA-4680] Length = 440 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 108/319 (33%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V ++AL+I P + + + Sbjct: 86 LLVLAGTVWVLMRVISAVQLVVLAFVAALLITALLQPTVARLTRHGVPR-GLATALTAIL 144 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L ++V + +WL + P + ++ + Sbjct: 145 GFVVMGLIGWFVTWQVMENIDNLSNQVQDGIDE---LRKWLLNSPFHVTPKQINEIAKNL 201 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ ++ + ++ I+ + + F DG I + Sbjct: 202 REAVGANTDQITSAGLEGV---------TVIVEALTGILLTMFSTLFLLYDGRRIWEWTL 252 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G I+A+ + + +G + VP V L V Sbjct: 253 KLVPSAARPGVAGAGPRAWRTLTAYVRGTVIVAMIDAIFIGLGIYFLDVPMAVPLAVFIF 312 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ +F A I L+PF++G +++ Sbjct: 313 LFAFIPLVGAVVSGALAVVVALVTQGVFTAVLTLAVVLAVQQIEGHILQPFILGRAVRVH 372 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 373 PLAVVLSVAAGGMVAGIGG 391 >gi|317181882|dbj|BAJ59666.1| membrane protein [Helicobacter pylori F57] Length = 349 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 134/363 (36%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKCFLN--LISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ R +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLRISSYVGKYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G G LG Sbjct: 168 RYFLGVLP-LGTNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ A + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|239943929|ref|ZP_04695866.1| putative integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|239990383|ref|ZP_04711047.1| putative integral membrane protein [Streptomyces roseosporus NRRL 11379] gi|291447394|ref|ZP_06586784.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291350341|gb|EFE77245.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 460 Score = 86.8 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 110/319 (34%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V +AL++ P + + V Sbjct: 87 LLVLAGTLWVLMRVISAVQLVVLAFAAALLVTAMLQPTVVRL-KRFGLPHGLATAVTAVL 145 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V + RW D P + S++ Sbjct: 146 GFVIIGLVGWFVVWQVMENLDTLSERVRDGIDE---LKRWALDSPFHVTESQI------- 195 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + TN + I + + +++ ++ + + F DG I + Sbjct: 196 -NDIAKNLNDTIGTNTEE-ITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEWSL 253 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G ++ VP V L V Sbjct: 254 KLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAIFIGFGLYVLNVPLAVPLAVFIF 313 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ ++ A + I L+PF++G +++ Sbjct: 314 LFAFIPLVGAVVSGALAVVVALVTEGVWTALWALVVVLAVQQIEGHILQPFILGRAVRVH 373 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 374 PLAVVLAVATGGLVAGIGG 392 >gi|170720411|ref|YP_001748099.1| hypothetical protein PputW619_1225 [Pseudomonas putida W619] gi|169758414|gb|ACA71730.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 357 Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 123/320 (38%), Gaps = 14/320 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P L +++ + + P+ + S T+ V+ +F + L L ++ + Sbjct: 27 LSPFLVGILLAYLADPLVDRLE-RMGLSRTW-------GVVVVFSLFTLILLVLLLILIP 78 Query: 91 ELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKT-NGID 147 L ++V + + WL +P L + +SE +T + + Sbjct: 79 MLAKQLVRLYELTPQMLDWLQHVALPWVQSRLGLADGFWKFDKIKAAVSEHMGQTTDIVG 138 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + A+ + L + + + + + F+ RD + +L SL + ++ Sbjct: 139 MLLSQATASSLALLAWLANFVLIPVVGFYLLRDWDLMMAKLRSLLPRQRESQVVGLAAEC 198 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ + G ++ + G++ + L G+ + +G++ + A++P I ++ Sbjct: 199 HEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLAGLAAIVPYMGFIIGIGAAL 258 Query: 268 ---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 G+++ + + + L P LVG I L + F ++ G G Sbjct: 259 VAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVAVIFAILAGGELFG 318 Query: 325 LLGLFIGPVLMALIAVIWKE 344 G+ + + A+I V+ + Sbjct: 319 FTGVLLALPVAAVIMVLLRH 338 >gi|282865329|ref|ZP_06274381.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282559802|gb|EFB65352.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 471 Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 107/308 (34%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V ++AL++ P + V Sbjct: 88 LLVLAGTLWVLMRVISAVQLVVLAFVAALLVTAMLQPTVVRL-KHLGLPRGLATAVTAVL 146 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V + + RWL D P + ++ Sbjct: 147 GFVVIGLVGWFVVWQVMDNLDTLSDRVRDGIEE---LKRWLLDSPFHVTEQQI------- 196 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + TN + I + + +++ ++ + + F DG I + Sbjct: 197 -NDIAKNLSDTIGTNTEE-ITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEWTL 254 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G I+A+ + + +G + VP V L V Sbjct: 255 KLVPAQARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFIF 314 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 315 LFAFVPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRVH 374 Query: 309 FLPTFFGL 316 L + Sbjct: 375 PLAVVLSV 382 >gi|322833961|ref|YP_004213988.1| hypothetical protein Rahaq_3267 [Rahnella sp. Y9602] gi|321169162|gb|ADW74861.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 354 Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 114/354 (32%), Gaps = 14/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I I+ LYFL G AP+L A+++ + WP + S T Sbjct: 10 RRRFTDPQAIALLAILVAGFCILYFLNGILAPLLVAIVLAYLLEWPTVR--LQHVGLSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + ++ + + + L++ + L Sbjct: 68 LSVSVVLIIFAGILLLGMFVIAPVTWQQGVNLMTDLPSMLNRFYDFAATLPK-------- 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + + +++ + L + +I + + +FF +D Sbjct: 120 RYPALVDAGIIDMMAENMRSKLSGLGESVVKYSLASLVGLLTLAIYLILVPMMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + +V + G + I G+ +W+ + Sbjct: 180 KEQMLSAVRRVLPRDRGLAGQVWVEMNQQVT-NYIRGKVLEMIIVGVATYLVFWVMDLHY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRP 298 + L V+ + +IP GA + V I + + + LF+ + + + P Sbjct: 239 SLLLAVLVGVSVLIPYIGAMLVTIPVVIVAMFQWGLGADFWTLFVAYLVVQGLDGNVIVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L L +V G G+F L L+ + Sbjct: 299 LLFSEAVNLHPLVIILSVVVFGGLWGFWGVFFAIPLATLVKAVVHVWPDESLNE 352 >gi|227874564|ref|ZP_03992727.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|227844773|gb|EEJ54919.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length = 478 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 116/329 (35%), Gaps = 17/329 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F ++ L+ + F P AL + T P+ I +K A+ A ++++ +F V Sbjct: 85 FAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLIRRKVP----AALAALLNIVLMFAV- 139 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ML + +++ + A +P + I L + ++ Sbjct: 140 --------MLGVTGMIAGALTAVTTELPRYQRKFQILYQDSIHLLERLGDRFNIDMSSVT 191 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + +A ++ + + F D + ++ L + Sbjct: 192 SPAQRVD-LGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELATYAPG 250 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 R + R FL T G ++ ++ VPS + G++ + IP Sbjct: 251 LAIS--LRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILAFVANYIPAV 308 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G IS + +L+ + A + + + +V ++P G + L +F L Sbjct: 309 GFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGLNPTISFLSL 368 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + +G LG + + I I+ +S Sbjct: 369 MVWSAVLGPLGAVVSVPMTLFIKAIFVDS 397 >gi|239814371|ref|YP_002943281.1| hypothetical protein Vapar_1364 [Variovorax paradoxus S110] gi|239800948|gb|ACS18015.1| protein of unknown function UPF0118 [Variovorax paradoxus S110] Length = 420 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 117/342 (34%), Gaps = 20/342 (5%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ +L S++ L+ F P++ +L++ + P+ + A + V + Sbjct: 68 LVVLAVLASVFALRWGQAVFIPLMLSLLLTYALSPLVERL-HRLWLPRWIAAALILVGL- 125 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--------LSDIPGGMWASELW 123 L + Y +L + +A Q R L + E Sbjct: 126 ---FGGLGWTGYSLSGNATQLAESLPIAAQKLGQAMRRSRSANATPLESVQQAAAQLEKA 182 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + + + + + + L+ + + +F G + Sbjct: 183 AEENSARVAARKGVARVVIERPSFNVRDYLLSGTVGLLEAIGQLTLVAFLTYFALCSGDT 242 Query: 184 ISQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++L + + + + I L +I+ G+ G A+W GV S Sbjct: 243 FRRKLIKITGPSLQKKKVTVHVLDDITRNIERYLLVQILISALVGVTTGLAFWAIGVESA 302 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 G+I A+ +IP G+ I A + ++ ++ + +V L P+ Sbjct: 303 AVWGIIAAVTNLIPYVGSVIVMVAAGLVAFLQFNSLEMGILVGGVSLAIHTLVGNLLMPW 362 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L ++ + F G++ G+ GL +G + +I I Sbjct: 363 LTSRTSRMNPVAVFVGVIFWGWLWGVWGLLLGIPITMVIKSI 404 >gi|28899050|ref|NP_798655.1| permease PerM [Vibrio parahaemolyticus RIMD 2210633] gi|153837005|ref|ZP_01989672.1| permease PerM [Vibrio parahaemolyticus AQ3810] gi|260365204|ref|ZP_05777761.1| permease PerM [Vibrio parahaemolyticus K5030] gi|260876868|ref|ZP_05889223.1| permease PerM [Vibrio parahaemolyticus AN-5034] gi|260897349|ref|ZP_05905845.1| permease PerM [Vibrio parahaemolyticus Peru-466] gi|260899824|ref|ZP_05908219.1| permease PerM [Vibrio parahaemolyticus AQ4037] gi|28807269|dbj|BAC60539.1| permease PerM [Vibrio parahaemolyticus RIMD 2210633] gi|149749778|gb|EDM60523.1| permease PerM [Vibrio parahaemolyticus AQ3810] gi|308088242|gb|EFO37937.1| permease PerM [Vibrio parahaemolyticus Peru-466] gi|308091358|gb|EFO41053.1| permease PerM [Vibrio parahaemolyticus AN-5034] gi|308107352|gb|EFO44892.1| permease PerM [Vibrio parahaemolyticus AQ4037] gi|308115433|gb|EFO52973.1| permease PerM [Vibrio parahaemolyticus K5030] gi|328474413|gb|EGF45218.1| permease PerM [Vibrio parahaemolyticus 10329] Length = 356 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 115/340 (33%), Gaps = 14/340 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ +S+ T +I Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVK--LSRMGVPRTLSVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + ++ L L ++ L++ + L + Sbjct: 73 VLLIFISIMLIALFGLVPTIWTQVGNLINDIPNMYNG-------LQKFIMTLPERHPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + I + +I + + +FF +D + Sbjct: 126 NLQIVETVVTNAKNQALGLGESVVKGSLASLVSIAT-LAVYLILVPLLIFFLLKDKEEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + L Sbjct: 185 RMASGILPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L L I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGMTPQFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWN 343 >gi|291537174|emb|CBL10286.1| Predicted permease [Roseburia intestinalis M50/1] Length = 462 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 128/372 (34%), Gaps = 38/372 (10%) Query: 6 LNPQGIMRWMIMFIILVS--LYFLKGF---------------FAPVLSALIIGFTSWPIY 48 L PQ ++ +++F+ L+F + P++ ++I + PI Sbjct: 29 LKPQYVIIALVVFVTFCCCILFFFMIYRYNGFTDFWKKLSLILQPIIIGVVIAYLLNPIM 88 Query: 49 S------------SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 SK + T + T S++ L + +L + + S + Sbjct: 89 KFLEGHLLKFLEPRMKSKCKAKKTSRGIAITGSLVFLVGICVLLVAAIVPSISASIQSMI 148 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q + +W+ ++ G +EL + + ETF + + + + + Sbjct: 149 TSFPQEAKNLTKWVDEVTNGD--TELASMIQQGVDKITDTVETFFEDDIFSKVQTYLTSI 206 Query: 157 GMIF---LDYCLSIIFMIIALFFFYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPK 209 + + L++I +I + D + Q + ++ + + R + Sbjct: 207 TSGVIYGVKFVLNVIVGLIISVYVMADQEHFAGQAKKIVYAMFKPVRANVIVDTVRKSNE 266 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + G + + G++ + +P V + VI + +IP P S + Sbjct: 267 IFSGFISGKILDSAIIGVLAYIVLAIMKMPDTVLVAVIIGVTNVIPFFGPFIGAVPSFII 326 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ N ++ + I + P ++G L F ++ G G+ Sbjct: 327 IVLQNPIQGLYFLIFIVVLQQIDGNIIGPKILGSSTGLSAFWVVFAILVFGGLWGFPGML 386 Query: 330 IGPVLMALIAVI 341 +G LMA+I + Sbjct: 387 LGVPLMAVIYYV 398 >gi|226365345|ref|YP_002783128.1| hypothetical protein ROP_59360 [Rhodococcus opacus B4] gi|226243835|dbj|BAH54183.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 403 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 89/265 (33%), Gaps = 13/265 (4%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + + + + + EL +K V WL P + Sbjct: 93 LVLFIAVVAGIIAGIVPSVVRQAPELANKATQGIN---QVQDWLKGPPINLQ-------- 141 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I + I +++ +++ FFF +DG Sbjct: 142 -DDQIDQGIHTIIVKVQESGTVIASGVFTGVSTASSLLITLGLVLVLSFFFIKDGPRFIP 200 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L S+ + +++ + + ++A+ + + +G+ + GVP L + Sbjct: 201 WLHSVSGGRAGRHLEEVLGRMWDTLGGFIRTQALVALVDAVFIGAGLLILGVPLAPVLAI 260 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T I IP GA ++ + L+ + A + + + I L+P L + Sbjct: 261 LTFIGGFIPIVGAFVAGALAVLVALVANGLTTAVIVLIIILVVQQIEGNVLQPVLQSKSM 320 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFI 330 KL + + G G++G F+ Sbjct: 321 KLHAVVVLLAVTAGGSVFGIVGAFL 345 >gi|118590149|ref|ZP_01547552.1| permease, putative [Stappia aggregata IAM 12614] gi|118437121|gb|EAV43759.1| permease, putative [Stappia aggregata IAM 12614] Length = 365 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 118/344 (34%), Gaps = 16/344 (4%) Query: 5 MLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I I+ + LY P ++ + + + P+ Sbjct: 1 MTLRRQVQFWLISLIVFCLFLYVFSSVLLPFVAGMAVAYLLDPVCDRLEKLGMGRMW--- 57 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 AT+ ++ F+V L+ F + + ++ L + + R L + + + L Sbjct: 58 --ATLCILFAFVVILVMFFILLLPLLGN---QLSLFLEKFPELIRKLQALLSENFPANLA 112 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 + + L+ + G FI + A G L + + F+ D Sbjct: 113 SVAGISAEDLQSSMSNLIG-QGASFIGKLAQSLWSGGQALLSILSLFVITPVVAFYLLLD 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++DS + + ++R + + + G + + G + L G+ Sbjct: 172 WDRMVARIDSWLPRPHLSEIRGLAREMDQAVAGFVRGQVSVCLILGSFYAISLALVGLNF 231 Query: 241 HVALGVITAIMAMIPG---GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +G+ +++ IP G + + + + + F+ L+ Sbjct: 232 GLLIGMAAGLVSFIPFVGAGLGLVLSLGVAIVQFWPEWPWIVAVAAVFGVGQFLEGNILQ 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P LVG L + F L G +G+ I A+I V+ Sbjct: 292 PKLVGDSTGLHPVALMFALFAFGYLFGFVGMLIAVPAAAMIGVL 335 >gi|58039452|ref|YP_191416.1| hypothetical protein GOX0988 [Gluconobacter oxydans 621H] gi|58001866|gb|AAW60760.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 419 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 115/349 (32%), Gaps = 15/349 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +RE + + + + + SLYF P + AL++ + Sbjct: 44 LREHLNIRDMCVLILTILAVFYSLYFTAPILLPFVFALVLNLLMIAPMRFLTQRLHLPRH 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + + A Q + L+ + G + Sbjct: 104 LAGLMLIVMMFGIV-------GGIATTISVPAAGWITRAPQTLPALQSKLALLSGPIDVV 156 Query: 121 E-----LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + L H S G + R S + M++ LF Sbjct: 157 QRDYMRLSAMFSGHSGSTHTTHGVSGTIGGETALSRLGSSVLAGTRELAGGFFSMLLMLF 216 Query: 176 FFYRDGFSISQQLDSLGE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F +G ++ ++ + + +++ + + + + +T++ +G GLV W Sbjct: 217 FLMTEGDTLLRRCVEIMPTYAKKRRLVEMATQIEQNVSLYLVTITMMNLGVGLVNMIQCW 276 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+P+ + GV+ ++ IP P+ + L ++ A + + Sbjct: 277 ATGMPNPLLWGVLAFLLNYIPIIGPLTGVVVYFVVGLFSFPSLLYALLPPSIYLLIHVLE 336 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P L+ L + L+ G+ G F+ ++A+ ++ Sbjct: 337 GETITPMLLARRFTLNPVFVMGSLLFWDWMWGISGAFLSVPMLAVFKIV 385 >gi|293394974|ref|ZP_06639262.1| PerM family permease [Serratia odorifera DSM 4582] gi|291422502|gb|EFE95743.1| PerM family permease [Serratia odorifera DSM 4582] Length = 398 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 118/357 (33%), Gaps = 14/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G P+L A+++ + WP + + S T Sbjct: 52 RRRFTDPQAIALLVILLAGFCILYFFHGILTPLLVAIVLAYLLEWPTAR--LQRIGCSRT 109 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A + V + ++ +L + + L++ + + + +P Sbjct: 110 WAASMVLVVFGGIAMLLVLVVAPTAWQQGINLMTDLPGMVN---QFYNYAATLP-----K 161 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + + +F+ + L + +I + + FF +D Sbjct: 162 RYPALVDAGIIDMMAENLRARLSGLGESVVKFSLASLVGLLTLAIYLILVPLMAFFLLKD 221 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + I + G + + G+ + + + Sbjct: 222 KEQMLNAVRRVLPRNRGLAGQVWIE-MNQQITNYIRGKVLEMVIVGVATYLVFIILDMRY 280 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP + T + + G + L + + + L P Sbjct: 281 SLLLAVLVGFSVLIPYIGAVLVTIPVVVVAMFQWGVGADFWTLIVAYLVVQGLDGNLLVP 340 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L L ++ G G+F L L+ + + + EK Sbjct: 341 ILFSEAVNLHPLVIILSVIVFGGLWGFWGVFFAIPLATLVKAVVHAWPDDMLVDMEK 397 >gi|149914373|ref|ZP_01902904.1| hypothetical protein RAZWK3B_20271 [Roseobacter sp. AzwK-3b] gi|149811892|gb|EDM71725.1| hypothetical protein RAZWK3B_20271 [Roseobacter sp. AzwK-3b] Length = 354 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 119/340 (35%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++L+FL P + I + P+ + S + T+ + +F++ Sbjct: 16 AAVFVLALWFLGDVILPFVLGGAIAYFLDPVADRL-QRMGASRALAVSLITLGALMVFVL 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + L+ V + ++ + QSL + Sbjct: 75 MALLVIPTLVQQSLALIDTAPQFFNKFQQVLT--------ERFPAIVDENSTLRQSLIAV 126 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ET + G + L+ L + + + F+ D + ++D L Sbjct: 127 GETIRERGGE--VLNSLLSSAASLLNVVLLFVIVPVVAFYLLYDWDRMVGRIDELLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ + + + S GM + + G A L G+ + +G + ++ IP Sbjct: 185 APVIRRLAGEIDQTLASFIRGMGTVCLILGTYYAVALMLVGLQFGLVVGALAGLITFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A++I L + G+ + + L P LVG + L + Sbjct: 245 VGALVGGALAIGLALFQFWGDWVSIGLVVAIFVAGQVAEGNFLTPKLVGSSVGLHPVWLI 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A I V+ + + +++ Sbjct: 305 FALSVFGALFGFVGMLVAVPVAASIGVLARFIVAQYMDSR 344 >gi|256381030|ref|YP_003104690.1| hypothetical protein Amir_7052 [Actinosynnema mirum DSM 43827] gi|255925333|gb|ACU40844.1| protein of unknown function UPF0118 [Actinosynnema mirum DSM 43827] Length = 402 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 86/239 (35%), Gaps = 3/239 (1%) Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + V LS I + L L Q + L ET G I A Sbjct: 108 ELQNQVTASLSTIRDWLKDGPLHLSELQLQQYVDQLLETVKANQGE--ITSGALTTAATV 165 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + ++ + L FF DG I + + + A R + S + Sbjct: 166 GELLTGLVLALFTLIFFLHDGDGIWRFITRIVPRDVRARADLAGRRGFASLVSYVRATAV 225 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 +A+ + + +G W+ GVP V L + + A IP GA I+ + L+ A Sbjct: 226 VAVVDAVGVGIGLWIVGVPLVVPLAALVFLGAFIPIVGAVITGVVAVLIALVANGPVAAA 285 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + + L+P L+G +KL L + G+ G+ G + L+A++ Sbjct: 286 VVLAILIGVMQLESHVLQPLLLGRAVKLHPLAVVLAISTGLVVAGIAGALLSVPLLAVL 344 >gi|255656234|ref|ZP_05401643.1| hypothetical protein CdifQCD-2_11174 [Clostridium difficile QCD-23m63] gi|296450331|ref|ZP_06892090.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296878743|ref|ZP_06902746.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260824|gb|EFH07660.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296430250|gb|EFH16094.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 364 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 109/326 (33%), Gaps = 2/326 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P + A ++ + P+ SK + ++ ++ + I +LF Sbjct: 36 LLMSLLTPFIIAFVLAYIFNPLVKFLESKLNFKRIYSLLLTYGVLIVILISFILFTVPSI 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + +LV+++ L + + L + S + + G Sbjct: 96 VNSLADLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTLKEYGDKIMSVMPKFSNLLIGSLG 155 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I G + + L I L + + + + + ++ + Sbjct: 156 G--IFSTTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDFIIELCQ 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I F G + + G++ G + + G I +M M+P P+ A Sbjct: 214 SLNLNIGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTIMGVMNMVPYFGPVIGMAP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + N A ++ I + + P +VGG + L T + G G+ Sbjct: 274 VVIINLFSNPTTALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVGGGFFGI 333 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 G+ + +M +I + + E + + Sbjct: 334 PGMILSAPVMGVIKIYFCEFVNRRHD 359 >gi|326789877|ref|YP_004307698.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] gi|326540641|gb|ADZ82500.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] Length = 377 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 124/333 (37%), Gaps = 7/333 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----STFLAVIATVS 69 MI+ I+L++ +K + + I+ + + + F++ + +++ ++ Sbjct: 18 VMILVILLIAFVIIKLNILGLFAPFIVAWLFASLLNGFVTWINKKTGLPRALGTILSMLT 77 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + L FL ++ + + + I L + + + +S+ Sbjct: 78 ILSGVLGLLTFLIKKLWEQVVAIAYNLPSLTEELIMQVGQLEERFSSFFGTGKAPSAISN 137 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L L + IP A D L + M++A FF +D + I + Sbjct: 138 LDQLIEQIMDKLSSYLGSVIP-VAYNAVSKVPDIVLFTVVMLVATFFMTKDYYKIKDFVK 196 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + V I I+ + ++ V + L VI A Sbjct: 197 AQFSDTIVDKVVIMQKGVLSAIGGYVRTQVIMMSITFSICMVGLFIFQVSYTLLLSVIIA 256 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +P G+ ++Y L+ G A L I +F+ + P ++ I + Sbjct: 257 IVDALPVFGSGTILIPWALYNLVTGQYTLAIGLLCIYGI-IFVTRQIFEPKILSTQIGVY 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G RTMG +GL IGP L ++ ++ Sbjct: 316 ALVTIMAVYIGYRTMGFIGLIIGPALAVILKML 348 >gi|288958154|ref|YP_003448495.1| hypothetical protein AZL_013130 [Azospirillum sp. B510] gi|288910462|dbj|BAI71951.1| hypothetical protein AZL_013130 [Azospirillum sp. B510] Length = 355 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 122/342 (35%), Gaps = 9/342 (2%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I + + +++L+ L P + L I + P + Sbjct: 1 MTPAKQLRFWLIGLGLFVLALWLLSDMLLPFVVGLAIAYLLDPAVDRLEVARLPR----W 56 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T+ ++ +V ++ L ++ + + + V L IP Sbjct: 57 LGTTLVLLGFLLVMVMMALLLLPLLQGQIAHLLEVLPTYATLVKERL--IPALNRFIHRL 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I G+ D + + F+ RD Sbjct: 115 PQDDVERLRAAAGAYAGELASLVGNIVTRILSGGLALFDIVTLMFITPVVAFYILRDWDL 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++DS ++ +R V + G + + G+ A +AG+ + Sbjct: 175 MVGKVDSWLPRQHAETVREQAREVNATLSGFLRGQATVCVVLGVFYALALSVAGLDFGLV 234 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLV 301 +G++ +++ IP G F + + L++ + + + + V+ L P LV Sbjct: 235 IGLLAGLLSFIPYVGTLFGFVSSTGLALLQFDELWRVGIVVGIFLFGQAVEGNVLTPKLV 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + L + F L+ G G +G+ + + A+I V+ + Sbjct: 295 GDKVGLHAVWVMFALLAGGSLFGFVGVLLAVPVAAVIGVLTR 336 >gi|23013849|ref|ZP_00053702.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 360 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 17/347 (4%) Query: 4 TMLNPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +M + Q + W+I + LV LY L+ P ++ + + + P+ S T Sbjct: 2 SMSSGQRLRFWLIGGTVFLVLLYLLRSVMLPFVAGMAVAYFLDPLADRMERA-GLSRTLA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----VLANQHGIPVPRWLSDIPGGMW 118 I + + + L L ++ V KV +P+ + Sbjct: 61 TGIICLVFFGIMGLGLTLLAPIIQQQVVTFVHKVPAYAEALQTRAMPLLEEVYRHLSADD 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + S+ + LK G+ + + + F+ Sbjct: 121 LEKLRSSVGSYAGTAVGWGMGVLKGVLSG---------GIAVMSILSLLFITPVVTFYML 171 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RD + ++D+ + R + + I G + + + G L G+ Sbjct: 172 RDWDHMIAKVDTWLPRHHAEVIRFELREIDRTIAGFVRGQATVCMVLAVFYGVGLTLTGL 231 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTL 296 + +G+ T + A +P + S+ L + + + V L Sbjct: 232 DLGLMIGLGTGLGAFVPYVGMLIGLIASVGLALAQGGEWHLLGGVGIVFLVGNVLEGNFL 291 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P LVG + L + F L+ G G +G+ + ++I V+ + Sbjct: 292 TPKLVGDRVGLHPVWIIFSLLAGGALFGFVGILLAVPAASVIGVLTR 338 >gi|307324926|ref|ZP_07604131.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306889424|gb|EFN20405.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 371 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 114/328 (34%), Gaps = 14/328 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ L++ +WP+ + + A TV + + + + + EL Sbjct: 47 PLVVGLLLTTLTWPL-ARVLRGLGWPPALAASAVTVLFLLVVTGIVALIAVPVASQSGEL 105 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +V Q V W S P + +++ + L+ + + + T Sbjct: 106 TDRVTEGIQ---QVREWASGPPLNISDAQITKATDTAADRLQSSAGSLVTTIVTGV---- 158 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 +D ++ + + +FFF +DG L ++ + Sbjct: 159 -----STVIDGVVTAVLALFLMFFFLKDGPRFLPWLTRQLPGRLATDIPVVAARGWDTLG 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + ++ + + + +G W GVP + L V+T I A +P GA + + L+ Sbjct: 214 AFVRSQALVGLLDAVFIGLGLWALGVPLVLPLAVLTFICAFVPIVGALFAGGVAVLIALV 273 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 +A + + +P + + L + G G++G + Sbjct: 274 SNGSTDALIALAIIVVVQQLEGNVFQPMIQSRGLGLHAAVILLAVTLGSSLAGIVGSLLA 333 Query: 332 PVLMALIAVIWKESIMAIKENKEKISSN 359 + ALIAV+W + E++ +N Sbjct: 334 VPVAALIAVVWNYLREQLSHPPEELENN 361 >gi|297191063|ref|ZP_06908461.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297150746|gb|EDY67165.2| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 367 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 120/350 (34%), Gaps = 17/350 (4%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + V+L+ L ++ P++ L++ +WP+ + F+ + A TV Sbjct: 21 LLVLVMTAVALWLLGRMWSVVWPLIVGLLLTTLTWPV-TRFLRRHGWPPALAASTVTVLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + EL VV Q L + G + + Sbjct: 80 LLAAVGVVALIAVPVASQSGELTDGVVEGIQK-------LREWAAGPPLNIGDDQISGAF 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + + + + + F +DG L Sbjct: 133 DAGVARIQDSVGSMVTAVVTGLGTVVNGVVTTVLALFLMFF-----FLKDGPRFLPWLAR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + + I+ + + +++G W+ VP + L V+T + Sbjct: 188 QLPGRLATDVPTVAARGWETLSAFVRSQAIVGLLDAVLIGIGLWILDVPLVLPLAVLTFV 247 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + +A + + + +P + + L Sbjct: 248 SAFVPIVGALFAGLVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHA 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G G++G + + ALIAV+W + + ++ ++ Sbjct: 308 AVILLAVTLGGSLAGIVGSLLAVPVAALIAVVWNYLREQLGDPSQEPGTD 357 >gi|314986760|gb|EFT30852.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] Length = 386 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWGAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|313500167|gb|ADR61533.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 357 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 123/342 (35%), Gaps = 14/342 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I V LY L P L +++ + + P+ + V+ +F + Sbjct: 13 ALLIAVLLYSLHNILTPFLVGIMLAYLADPLVDRLERLGLSRTW--------GVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK---HLSHPQSL 133 L L ++ + L ++V + + WL + L Sbjct: 65 FTLLLLALLLVLVPMLAKQLVRLYELAPQMLDWLEHVALPWVQGRLGLADGFWKFDKIKA 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + T+ + + A+ + + + +++ + + F+ RD + +L L Sbjct: 125 AIGAHMGQTTDIVGMLLSQATASSLALVGWLANMVLIPVVGFYLLRDWDLMMGKLRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + L G+ + +G++ + A+ Sbjct: 185 RQREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLAGLAAI 244 Query: 254 IPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P I ++ G+++ + + + L P LVG I L + Sbjct: 245 VPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F ++ G G G+ + + A+I V+ + KE+ Sbjct: 305 AVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKES 346 >gi|307352761|ref|YP_003893812.1| hypothetical protein Mpet_0600 [Methanoplanus petrolearius DSM 11571] gi|307155994|gb|ADN35374.1| protein of unknown function UPF0118 [Methanoplanus petrolearius DSM 11571] Length = 346 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 117/343 (34%), Gaps = 20/343 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + ++ ++ A P K + A I T V +V Sbjct: 19 VAVSAIAVFSTLIGVLIVAAAFAIVLMPAQRYLGLKM--RAGISAAIITTLVAVFIVVAF 76 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++ + WL+ + + A E+ + E Sbjct: 77 YVTAVVIINDSGFFLNMIESIT-------AWLNSLLFNIKAEEISGTFAVSSDVFLEILE 129 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 ++ + + + ++++ F G +I S+ Sbjct: 130 K---------TEDWSLELLSMAPQIIMKTFILFLSMYLFLVLGDNIHLDFISIMPRSVMP 180 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K + + ++ + F ++A + +++ G + V++ ++A+IP Sbjct: 181 SIKIFEKSIVDMLYAVFNVHIVVAFIVFIASFPVFYILGYDHILFFAVLSTVLALIPVLG 240 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGA--IELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ A I + + + + A + I D +RPFL+G K+ + F Sbjct: 241 PVVMIAFLALYAISISDWQGLIIIIAIAWPLLCAIPDWWIRPFLMGKRTKISGVIMFIAF 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GG+ MG++G IGPV++AL+ ++ I + + + Sbjct: 301 FGGIMAMGVVGFIIGPVIVALVIACYRIIIAGHVIPADPVPRD 343 >gi|212710881|ref|ZP_03319009.1| hypothetical protein PROVALCAL_01949 [Providencia alcalifaciens DSM 30120] gi|212686578|gb|EEB46106.1| hypothetical protein PROVALCAL_01949 [Providencia alcalifaciens DSM 30120] Length = 361 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 115/355 (32%), Gaps = 14/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + + ++ I + ++F AP+L A+++ + WP + + + S Sbjct: 10 RRRFADPQAVALFSLLVIGFLVIFFFSSILAPLLVAIVLAYLLEWPTH--LLQRLGLSRV 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + +L + + LV+ + + +P A Sbjct: 68 LAVSIILTLFAGISAMVILIIAPTAWQQGINLVADLPNMVNR---FSEFARRLPEQYPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + ++ + + +FF +D Sbjct: 125 VDAGIIDMMADNVRSRLSVVADSVVKASVASLIG-----IFTLAVYLVLVPLMMFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I++ L K+ + + I + G + G+ + + Sbjct: 180 KEKITKSFLKLLPK-NRLLVSKVWLEMNQQITNYLRGKVTEMVIVGVFTYIGFAYFDLRY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRP 298 V L V+ + +IP GA ++ V + L + I LF+ + + + P Sbjct: 239 SVLLSVLVGVSVLIPYIGAVVATIPVVLVALFQWGIGTEFWSLFIVYLVIQGLDSNIVVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + + + Sbjct: 299 LLYSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVINAWPQDLNDAE 353 >gi|148556366|ref|YP_001263948.1| hypothetical protein Swit_3464 [Sphingomonas wittichii RW1] gi|148501556|gb|ABQ69810.1| protein of unknown function UPF0118 [Sphingomonas wittichii RW1] Length = 406 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 106/317 (33%), Gaps = 14/317 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF PV AL+I P+ + S A++ + + L + + Sbjct: 67 FFLPVTIALVIAVAMVPLLEWLERRGLPSP-LAALLCVLIFLGLANAAIASVIIPATEWF 125 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L S++ L ++ P+ + + + + + +T + Sbjct: 126 ARLPSRIRLIRKNLSPLID----------IYSAFERFVDETMGSLLRNTAHGRTVTVQSP 175 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGEHLFPAYWKKISRIVP 208 + ++F + ++FF + ++ + S G ++ + + Sbjct: 176 NSLFDYVASSAPHALVQLVFATLVVYFFLSSWTRMRRRTITSRGSFSSAMTTARVIQDMV 235 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA--VS 266 + +T + IG G+++ W AG+PS + G + AI+ IP PI Sbjct: 236 DRTSAYLATITAVNIGMGILVSLMLWFAGMPSPIMWGGLVAILNYIPYFGPIVAAGLLAV 295 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L+ ++ A L + L P LVG + + L L G Sbjct: 296 GGLMTFSDLGYALVPALLFVAVHLVEANVLTPMLVGRRLTINPLLILVALSFWSWVWGTA 355 Query: 327 GLFIGPVLMALIAVIWK 343 G + L+ ++ I Sbjct: 356 GALLAVPLLIILKTILD 372 >gi|315649616|ref|ZP_07902701.1| hypothetical protein PVOR_30708 [Paenibacillus vortex V453] gi|315275089|gb|EFU38464.1| hypothetical protein PVOR_30708 [Paenibacillus vortex V453] Length = 359 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 119/331 (35%), Gaps = 10/331 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F P++ + + P+ +K S ++++ +++V + Sbjct: 37 FFSIILVPLMLSGFFYYLLRPLVDLLEKRKLNRS--------LAILLIYVVFAGIFTGFI 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + L +++ + + L + + L+ + + +L G Sbjct: 89 IGVWPSLRDQIIALVDNAPALFAALGEQLQEWENNGLFKEIFPEDSNPLTQLTDYL-NQG 147 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F+ + I ++ + + I L++ ++G + + S + F + Sbjct: 148 FTFLTNYIMNLFSIVSNFAIVLFTFPIMLYYMLKEGGKFGKMIVSFMPNRFKEVGASVLD 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ +G ++ + G+++ + + G+P + L V+ IP I + Sbjct: 208 EINSALKGFIVGRVLVNLALGVLMYFGFLIIGLPYALLLTVVAFFANFIPFIGAILSSIP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + A + + D + P++ G + + + ++ G G+ Sbjct: 268 IVIIGFIQSPGTAIWSLVVILAAQQVQDNLIGPYIFGKQLAIHPITIIILVLVGQDLGGI 327 Query: 326 LG-LFIGPVLMALIAVIWKESIMAIKENKEK 355 +G L + PV M + V+ + + KE EK Sbjct: 328 IGILIVVPVYMIIKIVVTRVYQLFFKEKWEK 358 >gi|154247058|ref|YP_001418016.1| hypothetical protein Xaut_3129 [Xanthobacter autotrophicus Py2] gi|154161143|gb|ABS68359.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 418 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 123/335 (36%), Gaps = 19/335 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + ++L+ L G P ++ +++ + P+ + + + T A++ ++ L ++ Sbjct: 69 LILTAIALWLLSGILLPFVAGIVLAYFLNPVVARLE-RIGVARTLSALVVVGIMLLLVVL 127 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS--ELWTKHLSHPQSLK 134 L +M E + ++ P +++ + G + E + + Sbjct: 128 FFLLALPLLSSQMFEFIQRL----------PAYVARLQGLLTEENREWLSGIVGDRLPDM 177 Query: 135 ILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + L T G+ + S G + ++ + +F+ D ++ +D L Sbjct: 178 QRSISDLMTQGVSHLVGLLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQL 237 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++R + + G ++ + G A +AG+ + +G+++ ++ Sbjct: 238 VPLPHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVI 297 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLP 308 IP G+ F +++ + I L P LVG I + Sbjct: 298 TFIPYVGSLTGFVLAMGVAIVQFFPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVH 357 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F L G +GL + L A+ V+ + Sbjct: 358 PVWLMFALFAFGYLFGFVGLLLAVPLTAVTGVLVR 392 >gi|297585066|ref|YP_003700846.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] gi|297143523|gb|ADI00281.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] Length = 394 Score = 86.4 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 105/320 (32%), Gaps = 12/320 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + A ++ + P+ F + + + + I + + + + + Sbjct: 47 PFIIAAVLVWMFHPLIRFFRKMLRMPNMLAVFLTVLLGLSAVIGSITGIIALIVFGFRRI 106 Query: 93 VSKVVLANQ----------HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + Q + P W + L + Sbjct: 107 SAFLPEWIQTTAIQAQDFFNQSIFPLWQQFSGAVDSLTPEQQTTLQNGIERLGTQLAEGS 166 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 TN + + + + + +F+ IA +F +D + + + + Sbjct: 167 TNIGQGMADGLASVIIFVPSFLIVFLFVFIAFYFIGKDWDRMFSKAYEITPAFILKKARA 226 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + + I+ +V+ + V + + +I I ++P G+ Sbjct: 227 FKTMFQYRVFGFVRAQLILMFIASIVVLIGLLILRVEHALTIAMIVGIAEILPYLGSGTI 286 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +Y+L+ G I L + + + + +++ P ++ + L L L G + Sbjct: 287 LIPWFVYMLLTGEISMGIGLAVVYGVTVG-IRQSIEPKVLSSSMNLNALGVLISLFVGFQ 345 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G++G+F+GP ++ ++ + Sbjct: 346 LFGVVGVFVGPFILVILVIF 365 >gi|209548699|ref|YP_002280616.1| hypothetical protein Rleg2_1096 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534455|gb|ACI54390.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 374 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 104/326 (31%), Gaps = 11/326 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ +V LY P ++ + I + P+ + S V Sbjct: 10 LKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGMSRMMATVG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + F + L+ L + + + ++ + W Sbjct: 69 ILIAFVITFALALMILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPDWVRSQAGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 LKDNFSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + + ++I+ + + I G + + G+ + L G+ + +G Sbjct: 184 AKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +++ IP + V+I + L ++ + F+ L+P LV Sbjct: 244 LFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSG-QFLEGNILQPKLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L G +G Sbjct: 303 GSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|257873728|ref|ZP_05653381.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257807892|gb|EEV36714.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 399 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 113/341 (33%), Gaps = 7/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ +KK S +A I + ++ + Sbjct: 35 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLETKKIPRSASIAGIYLLILLLIVF 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + S L + +L + P +++ + ++ Sbjct: 95 AGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIMS 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + +T S +++ I FF R+ + SL Sbjct: 155 FIGDYWQTGAAGL-----SSLFSTISTLFIALFTGPIIAFFLLRNPNKFYFSVLSLVPPR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 210 FRKDFNEIVKISDLQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 269 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I F L W A++L D + P ++G +K+ + Sbjct: 270 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVV-PRVMGDRLKIHPITILV 328 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ MG++G+ G + L+ V+ K+ + Sbjct: 329 VLLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQRYNR 369 >gi|160871644|ref|ZP_02061776.1| membrane protein, PerM family [Rickettsiella grylli] gi|159120443|gb|EDP45781.1| membrane protein, PerM family [Rickettsiella grylli] Length = 358 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 131/359 (36%), Gaps = 14/359 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESS 59 + + +P+ + W+ + I++ L APV +++I + WPI+S + K Sbjct: 9 LNRYIFDPELAILWLFLLFIIIVFASLGKILAPVFVSIVIAYLLQWPIHS--LEKLHLPR 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + +S + L I+ ++ L ++ L++++ G + +L G + Sbjct: 67 IAAVLGVYISFVSLVIIGIVGLLPLLFRQLNNLIAELPAMVAKGQALLLYLPTRYPGYTS 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + +S S L + + +IP + + + + + + ++FF Sbjct: 127 VNQIQEWILQFKSQLTHSGQLLLSASLGYIP--------NVIAFAIYFVLVPLLVYFFLL 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I L + + ++ + + G + + ++ ++ + G+ Sbjct: 179 DEKKIIGWLSRYLPEKRRLISQVWTEVLTQT-GNYVRGKALEMLIVWIITYLSFAILGLQ 237 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLR 297 + L V+ + +IP GA + V I ++ L + + + L Sbjct: 238 YAILLSVLVGVSVIIPYIGAVMVTIPVLIIGFLEWGWTAHFAYLVAIYTLIITLDANVLV 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P L + L + ++ +G G+F L +++ I NK I Sbjct: 298 PLLFSEAVNLHPVTIIIAVLVFGGLLGFWGVFFAIPLASVVNAILNVISCKKAGNKNNI 356 >gi|328912764|gb|AEB64360.1| putative permease [Bacillus amyloliquefaciens LL3] Length = 353 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 114/318 (35%), Gaps = 15/318 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +K F P+ A+ I + PI K T+S++ ++ + + + Sbjct: 37 LVIKSLFIPIFIAVFIAYLLLPITEWLHGKGMPR--------TLSLLLIYFLFFGGIGWG 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L+ ++ ++ + + + L P + + ++ Sbjct: 89 VYKGVPVLIEQLQDLSESIPGLAENYNSM-----LRHLHNHTDHWPDGMHHRMDKMIQQT 143 Query: 145 GIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 S I DY L + +F+ +D ++ + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVFDYILIAATIPFLVFYMVKDIDAMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL+ G ++W+ G+P + LG++ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGLIAGCSFWMFGLPYPLILGLVIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPALLLALALSAKAVIIVIITIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAV 340 G+ G+ + A++ V Sbjct: 324 AGIPGMILAVPAAAVLKV 341 >gi|116617770|ref|YP_818141.1| permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096617|gb|ABJ61768.1| Predicted permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 384 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 109/325 (33%), Gaps = 7/325 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP++ + ++ + PI + + ++ + V + + ++ + Sbjct: 55 APIMISGVLYYLLSPIVGLLEKYVHLPRNLSIGVVLIVLLAIIGVAIAAIVMVLRNQVIQ 114 Query: 92 LV-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + + L + Q++ S+ +L + Sbjct: 115 FIDNWPNYWKTSEAFINETFASEQFKFIRDYLNHTNSDLNQNVLDWSKKYLTSGVAGI-- 172 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S F I ++I+ L++ DG S + S + + + + K Sbjct: 173 ---SSFASILTSIGVTIVSTPFILYYMLLDGHKFSSFVSSKFPNNSQLSVRYLLTEISKQ 229 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G +A+ ++ Y + G+P + L ++ +IP G+ I+ V Sbjct: 230 IAQYIRGQLGVALAVMIMFSIGYTIIGLPYGILLALMAGFFNLIPYVGSIIAQVPVFTVA 289 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI G + AIE I + P ++G + + + L+ G+LG+ Sbjct: 290 LIAGGPKMLILAIIVLAIEQPIEAHVISPKILGEALSIHPVTVIVVLLSSGHIFGVLGIV 349 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 + A+ V + N + Sbjct: 350 LAVPSYAVAKVFVTHIYDWWRANSD 374 >gi|331269100|ref|YP_004395592.1| permease [Clostridium botulinum BKT015925] gi|329125650|gb|AEB75595.1| permease [Clostridium botulinum BKT015925] Length = 368 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 117/337 (34%), Gaps = 3/337 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I+ S + P A I + PI F K + F +I + ++ + + Sbjct: 30 ILAGSFGVILAILTPFFWAFGIAYILNPIMVYFERKFKFKRNFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + +L + + + ++ + + + + S + Sbjct: 90 TIISPAIINNVDQLANNIPTYVRKTQTWFYETITR--FNLSNNTTLIQFANKSLSSITAT 147 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + ++ A FL I + L +I L SL + Sbjct: 148 LTASLNSFLNVALTKAIDITSSFLKMIFGFIISVYILKDKEVFQKNIKDFLYSLFKKKSV 207 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + V + +G +I ++ GL+ + P + + ++ + MIP Sbjct: 208 DSFLIFGCEVNTIFSQYIIGKSIDSLIIGLLCAIGLGILKTPYVLLISLLVGVTNMIPYF 267 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + + A +F++ + L P ++G + + + Sbjct: 268 GPFIGMIPAVLITLFSSPIKALWVFIFILVLQQFDGWVLGPKILGDKVGVSPFWIILAIT 327 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G T G+LG+F+G ++A+I + ++ ++ NK Sbjct: 328 VGGGTFGVLGMFLGVPIIAVIKTLLQKFVLNRLNNKN 364 >gi|315657444|ref|ZP_07910326.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491916|gb|EFU81525.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 487 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 11/298 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ K T A+I+ + + L + + L+ K + Sbjct: 105 PMHLRL-QKWHIPKTLSAIISLLVGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKAL- 162 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WLSD P + ++ + + + + + +S ++ Sbjct: 163 --AWLSDGPLKLDQEQIEKYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTT---- 216 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I+ + LFFF +DG I L + + + + ++A+ + Sbjct: 217 -ILISLFCLFFFLKDGRQIWIWLIRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVD 275 Query: 226 GLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFL 283 + + + G S L ++ I A IP ++ A+++ LL+ A + + Sbjct: 276 SVFISIGAAVLGAGSMTIPLALLIFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLI 335 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L P L+ + L L G+ G G++G + ++A + Sbjct: 336 VILAVQQIESNVLHPMLMSSAVNLHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTV 393 >gi|42520946|ref|NP_966861.1| hypothetical protein WD1144 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410687|gb|AAS14795.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 354 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 128/351 (36%), Gaps = 13/351 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-----T 60 + + I I+ I+ L+ ++ P L ++II + P+ F + S Sbjct: 1 MQKRHITICFILLFIIGMLFLMRPMIFPCLISIIIAYLFNPLVVKFEKYRIPRSCSVIFI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 L ++ ++ F++P++++ +L LVSKV IP ++ Sbjct: 61 ILILLIAFILVITFVLPIIYVQITSILNF--LVSKVPSLKFKVIPSVLEFLNMKIEDSLF 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + +K+L+ S + N +D F + + ++ + F+ RD Sbjct: 119 DHLSKNLAENYSNYVS----YFMNALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I ++ L + V +I + G + I + + + G+ Sbjct: 175 WPLIIEKASKLIPIPYRGKIADYFSKVDFIISNYLKGQVNVCIVMMVFYSVSLSIIGLEH 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+++ ++ IP P+ +T + I F + + L + I L P Sbjct: 235 SIVIGILSGMLTFIPYVGPLLYTIIGFLSAITQFSGWFESAAVLLLFGVGQLIDSNILVP 294 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+G + + G+ G G+ + ++A+ V + +I Sbjct: 295 LLIGKKVHIHPTVIILGITICASYFGFTGILLFIPIIAMFNVSVEYAINKY 345 >gi|297537445|ref|YP_003673214.1| hypothetical protein M301_0250 [Methylotenera sp. 301] gi|297256792|gb|ADI28637.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 364 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 110/330 (33%), Gaps = 24/330 (7%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLF 80 Y L P L A I+ + P+ + K T V+ + + + LL Sbjct: 31 YLLLPILTPFLVAAILAYMCDPLVDRLCLVGVGKFRIGRTLATVLVMAGIFGIITLLLLI 90 Query: 81 LFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L E + ++ N V WL + ++ + Sbjct: 91 LIPLLQKESLLIAERLPSTINNIRTTVEPWLQS--------KFGISFAIDGAQIQDIITK 142 Query: 140 FLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 KT G + A GM + +I+ + + LF+ RD ++ L + Sbjct: 143 NWKTAGGLLGDVLMMAGNNGMALIGIIANILLLPVVLFYLLRDWDIFVARIGQLIPREWH 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 I+ + +V+ G + + W AG+ + +G++ ++ +P Sbjct: 203 DKTTNIASEIDQVLAEFLRGQLSVMLAMSAFYAIGLWFAGLDMALPIGLVAGLLGFVPYL 262 Query: 258 APISFTAVSIYLLIK-----GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +++ + G + +F G + + L P LVG I L + Sbjct: 263 GFALGVVLALVVAALEFTSFGQLIPVLIVFSLGQLVESM---VLTPKLVGDRIGLHPVVV 319 Query: 313 FFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 F L+ G + G G+ + PV A+ + Sbjct: 320 IFALLAGGQLFGFAGVLLALPVSAAIAVGL 349 >gi|229047016|ref|ZP_04192640.1| hypothetical protein bcere0027_30240 [Bacillus cereus AH676] gi|228724307|gb|EEL75640.1| hypothetical protein bcere0027_30240 [Bacillus cereus AH676] Length = 376 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGLLFYILHP-FVSLLEKKGVSRIVSIASIYLIVLGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 103 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 159 KEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 219 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 279 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGIILAIPGYAILKVL 364 >gi|330863271|emb|CBX73396.1| putative permease perM [Yersinia enterocolitica W22703] Length = 338 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 118/334 (35%), Gaps = 18/334 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+A+++ + WP + + S Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTAR--LQRIGCSRP 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + ++ + + + L+S +P+ L+ Sbjct: 68 WAASIVLVVFGGIALLAVFVVAPTVWQQGNNLLS----------DMPKMLNKFNAFAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + +F+ + L + +I + + LFF Sbjct: 118 PARYPALVDAGIVDMMAENLRSKLSGMGESVVKFSLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRILPRNRGLAGQVWLE-MNQQITNYIRGKVLEMVVVGVATYLVFFVLGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF+ + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L + L L ++ G LG + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFLGRVL 330 >gi|282859354|ref|ZP_06268462.1| conserved domain protein [Prevotella bivia JCVIHMP010] gi|282587839|gb|EFB93036.1| conserved domain protein [Prevotella bivia JCVIHMP010] Length = 358 Score = 86.4 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 133/363 (36%), Gaps = 16/363 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + + + +I II + LKG P A ++ + PI K Sbjct: 1 MIQPITLDKFLRWTVIALIITAVFFVLKGLSSVLLPFFVAWLLAYLLHPIVKFIQFKMHV 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYY-GMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S +++I T + L I ++ + + ++ +L Q I Sbjct: 61 KSRAVSIIITFILAILIITGVVMVIVPPFIDQVAKLGDLANRYVQDNTHSSSIAGMIKKW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + + +T + DF+ + AS I + ++ +FF Sbjct: 121 INDNHAQIDKFLNSRDFADTIKTAMPK-LFDFVGQTASVVMSIIASF-----ITLLYMFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + + L + +W ++ V + + S G ++A+ G++ + + Sbjct: 175 ILLDYDDLLKSLVKMIPKSQRPFWCGLASDVERALNSYIRGQGLVALTMGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA------IELF 290 P + LG++ I+ ++P I+ ++ L+K + ++GA I Sbjct: 235 DFPMAIGLGILIGILDLVPYLHSIALIPTALLALMKAANTGSNFWMIFGAAVLVFIIVQI 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I+D + P ++G + L L +G +GL I L +I WK + + Sbjct: 295 IIDMVVTPKVMGKAMGLNPAVLLLSLSIWGALLGFIGLIIALPLTTIIIAYWKRYVTKEQ 354 Query: 351 ENK 353 E + Sbjct: 355 EEQ 357 >gi|75676666|ref|YP_319087.1| hypothetical protein Nwi_2482 [Nitrobacter winogradskyi Nb-255] gi|74421536|gb|ABA05735.1| Protein of unknown function UPF0118 [Nitrobacter winogradskyi Nb-255] Length = 662 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 108/359 (30%), Gaps = 27/359 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +I +++ LY + F P++ A+++ F P+ + V+ Sbjct: 8 DRALASAVIAALVICGLYVGREIFVPIVLAVLLSFVLAPLVDILERWHFPRFASVPVVVL 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + +F L + E++ L + Q + L + Sbjct: 68 LAFIAIF-----ALGGLIVREVRGLADSLPSYQQTMQQKIQSLRALTATGPLDRAAEILQ 122 Query: 128 SHPQSLKILSETFLKTNGI--------------------DFIPRFASRFGMIFLDYCLSI 167 + + + S L +I Sbjct: 123 NLGKEISGPQSPPPPAEISPSSRTAEPVKPIPVEVRTPPQSALENISALISPLLHPLATI 182 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ + F + + L + L ++ G G+ Sbjct: 183 GIVVVFVIFILFQREDLRNRFIKLAGSNDLQSATAAIDDAAGRLSRLLLMQVLLNTGFGV 242 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 ++ S L GVPS + G++ AIM +P P + L + + + L+ I Sbjct: 243 IVASGLLLIGVPSAILWGILAAIMRFVPYVGPFIAAFFPLTLAVAVDPGWSMLLWSGALI 302 Query: 288 ELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L IV + P LVG L + G +GL + L + V+ + Sbjct: 303 LLTELIVGQVFDPLLVGHSSGLSPVAVVVSATFWTALWGPIGLVLATPLTICLVVLGRH 361 >gi|315586748|gb|ADU41129.1| membrane protein [Helicobacter pylori 35A] Length = 348 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 135/363 (37%), Gaps = 25/363 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + +Y + F L A ++ + + + + + Sbjct: 1 MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 59 CVLVLASVLIVPLYFIIYKSSNIIFEI------NFEKFSALIKWLKG-----TITENLSH 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E F + ++ + +S G L +F++ LFFF+ G Sbjct: 108 FPTIHDGASKFLENFSAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L KKI V ++R L I I EG+ G+ G LG Sbjct: 168 RYFLGVLP-LGMNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWS-LG 225 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV-- 301 ++ + +++P G + + ++IY L GN+ + L+ + + ++D ++P L+ Sbjct: 226 ILYGLASLVPAVGGALIWIPIAIYELYHGNVNETIFIALYSILLISVLIDSVIKPILIVF 285 Query: 302 ------GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 286 IKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 Query: 356 ISS 358 Sbjct: 346 ACE 348 >gi|172058669|ref|YP_001815129.1| hypothetical protein Exig_2664 [Exiguobacterium sibiricum 255-15] gi|171991190|gb|ACB62112.1| protein of unknown function UPF0118 [Exiguobacterium sibiricum 255-15] Length = 385 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 111/314 (35%), Gaps = 8/314 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+ A I+ + PI K + AVI + + + L F+F + + Sbjct: 44 VPPLAIAGILYYVLLPIVELLEKKMKRRP---AVILVLLGLVSILTALGFIFGPMLSD-- 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ V R L D+ + S +++ LS L + F+ Sbjct: 99 QITEFVNSIPTLASQFQRQLIDVRDQLENSAFFSRFLSGQDDLFNKFSGNVSEYASTFLK 158 Query: 151 RFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G +++ ++ I L + DG + L + + KKI V Sbjct: 159 NIGTGVGGFVSVITTTVVTIVIIPIMLIYMLLDGDKLKGNLVKMMPFEYHKETKKILHDV 218 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 I S G I++IG G++ Y + G+ + L + + +IP P+ ++ Sbjct: 219 HLTIMSYIRGQVIVSIGVGIIAYIGYLIIGIDYALLLALFATLTNIIPFLGPVIGVVPAL 278 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + A + + I + P + G + + L L+ G G Sbjct: 279 IVGFIQDPILAVYAVIVMTVAQQIDSHIMSPLVQGKTLDVHPLTIIIVLLVAGNIAGFFG 338 Query: 328 LFIGPVLMALIAVI 341 + +G A++ V+ Sbjct: 339 VLLGVPFYAVMKVV 352 >gi|256838716|ref|ZP_05544226.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739635|gb|EEU52959.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 415 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 133/360 (36%), Gaps = 23/360 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ + L+ P L A ++ + P F K S L+++A + Sbjct: 46 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 105 Query: 69 SVMCLFIVPLLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I L+ + E + + + + VP W ++L Sbjct: 106 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVP----------LIPHSWMEYL 155 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-----YCLSIIFMIIALF-FFYRDG 181 + + E K N + + + A + I + + ++I+F+I+ F F D Sbjct: 156 ESNVNFAQIMELLSKENLLKAVKQIAPQLWSILSNTFSILFSITIVFVILLYFIFILLDY 215 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ L + + + ++ V + F G ++IA+ G++L + + P Sbjct: 216 EKIANGWIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLA 275 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA------IELFIVDKT 295 V LG+ ++ +IP I + + L++ ++G I I D Sbjct: 276 VTLGLFIGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLY 335 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G + L L +G +GL I L L +K I+ + Sbjct: 336 LTPRIMGKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEYNELDS 395 >gi|324991328|gb|EGC23261.1| permease [Streptococcus sanguinis SK353] gi|324993686|gb|EGC25605.1| permease [Streptococcus sanguinis SK405] gi|324995001|gb|EGC26914.1| permease [Streptococcus sanguinis SK678] gi|325696326|gb|EGD38217.1| permease [Streptococcus sanguinis SK160] Length = 374 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 108/334 (32%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L + + + P+ K + + +I + L + +++L Sbjct: 37 VVNTILIPFLVGGFLYYITNPLVKFLQEKLKINRMIGILITLSLLFGLIALGVIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ LS P ++ LS + N Sbjct: 97 INQLSSLINSTQGLYWEIQSFVNQLSKNPL------FRNLNIQSTIQQLNLSYVDILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ + +I I L +F DG + L+ + Sbjct: 151 LNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISSLLT 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G++I A+ G + Y + G+ + + +++ +IP P Sbjct: 211 NLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + ++ I + L P +VGG +K+ + L+ G+ Sbjct: 271 MVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+ + +++ I K +KE Sbjct: 331 LGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQK 364 >gi|313113534|ref|ZP_07799123.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624261|gb|EFQ07627.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 425 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 120/346 (34%), Gaps = 17/346 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPI-------YSSFI-SKKEESSTFLAVIATVSVMCLFIVPL 78 L G P + +I + P+ FI K L++ T+ L I L Sbjct: 49 LTGILMPFIYGAVIAYLLKPVCNTIESFLRRFIPEKMHGLVNVLSITLTILFGLLLIYAL 108 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + + A ++ +W + + ++ S ++ + Sbjct: 109 CMMIIPQL--ITSVTTLYYTAQRNLAKFVQWANHVEFIENNQQIMDMLNSAYATISTNID 166 Query: 139 TFLKTN---GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +KT + I A+ + + ++I II + QQ + + Sbjct: 167 DLIKTRLLPSMQNIVSGAAAGVLNVVTMAKNLIIGIIVAVYMLASRKRFVQQAKLVLYSI 226 Query: 196 FPAYWKKISRI----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F W ++ + K+ G + + G++ + PS + + VI + Sbjct: 227 FKPRWAELIKEEVKYADKMFGGFINGKIMDSAIIGVLCYIGCLIFKFPSALLVSVIIGVT 286 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P + L++ N A L+ + + + P ++G L Sbjct: 287 NVIPFFGPFIGAVPATLLILIQNPIKALWFVLFVLVLQQLDGNVIGPKILGNTTGLSSFW 346 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G+ +G L A+I + K+ ++ + ++I Sbjct: 347 VLFAILLFGGLWGFVGMIVGVPLFAVIYDVIKKLVVHGLKRNKEID 392 >gi|146283164|ref|YP_001173317.1| transporter, putative [Pseudomonas stutzeri A1501] gi|145571369|gb|ABP80475.1| transporter, putative [Pseudomonas stutzeri A1501] Length = 365 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 119/334 (35%), Gaps = 14/334 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + +Y L P L +++ + P+ + V+ +F + Sbjct: 15 LLLCTWLVYLLTPILTPFLIGVLLAYLGDPLVDRLERWGLSRTW--------GVIAVFAL 66 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-WTKHLSHPQSLKI 135 L L ++ + L ++V Q WL + ++ + LK Sbjct: 67 FSLLLLVLLLVLVPMLGKQMVKLYQLAPLALDWLQHVALPWVQTQFGLEDNFWQLDRLKA 126 Query: 136 LSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + + I A+ + L + +++ + + F+ RD I +L SL Sbjct: 127 AFTAHLGSTTDVLGMILSSATASSLALLAWIGNLLLIPVVSFYLLRDWDLIMLKLRSLLP 186 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +VI + G ++ + ++ S L G+ + +GV+ + ++ Sbjct: 187 RKREGMVVRLMSECHEVIGAFLRGQLLVMLALAIIYASGLMLVGLELGLLIGVLAGLASI 246 Query: 254 IPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + ++ + + + + + + L P LVG I L + Sbjct: 247 VPYMGFVVGIGAAVIAALFQFGLAPYPLIGVAVVFTVGQMLEGMLLTPLLVGDRIGLHPV 306 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G + G G+ + + A+I V+ + Sbjct: 307 AVIFAVLAGGQLFGFTGVLLALPVAAVIMVLLRH 340 >gi|198282862|ref|YP_002219183.1| hypothetical protein Lferr_0725 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665195|ref|YP_002425063.1| hypothetical protein AFE_0571 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247383|gb|ACH82976.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517408|gb|ACK77994.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 347 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 124/347 (35%), Gaps = 10/347 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q I+ ++ Y L +P L A I+ + P+ + + + ++ + Sbjct: 2 QRFFVLAILILLGWLAYRLSPILSPFLIAGILAYLGNPLVTRLQRYRINRTWGTTLVFVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + + L + + +L ++ L ++ + S Sbjct: 62 VILVLAGITMALL--------PVIRHQSLLFVEYLRQYLELLQTRIIPQLSARIGIPLDS 113 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A G + LSII + + F+ RD + ++ Sbjct: 114 QSLTHYATANAQKLAGWLGRSLQMALSSGPSLISSVLSIILVPVLGFYLLRDWPRLIARI 173 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + ++++ ++ + G ++ + G + G+ + + +G++ Sbjct: 174 AALIPPHYLPLSRRLAGDADAMLMAFLRGQLLVMLALGASYAIGLSIVGLKTAILVGLVA 233 Query: 249 AIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +++ +P +S A++ + G + + I + P+LVG I Sbjct: 234 GLLSFVPYLGVVSGIAMATLAMYVQTGAFLPILGVLIVFGIGQILESMVFTPYLVGDRIG 293 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G G GL + + A++ + + +++ Sbjct: 294 LHPVAVIFAVLAGGELFGFSGLLLALPVTAVLIALLRHLHGWYVQSR 340 >gi|315654644|ref|ZP_07907550.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491108|gb|EFU80727.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 487 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 11/298 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ K T A+I+ + + L + + L+ K + Sbjct: 105 PMHFRL-QKWHIPKTLSAIISLLVGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKAL- 162 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WLSD P + ++ + + + + + +S ++ Sbjct: 163 --AWLSDGPLKLDQEQIEKYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTT---- 216 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I+ + LFFF +DG I L + + + + ++A+ + Sbjct: 217 -ILISLFCLFFFLKDGRQIWIWLIRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVD 275 Query: 226 GLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFL 283 + + + G S L ++ I A IP ++ A+++ LL+ A + + Sbjct: 276 SVFISIGAAVLGAGSMTIPLALLIFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLI 335 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L P L+ + L L G+ G G++G + ++A + Sbjct: 336 VILAVQQIESNVLHPMLMSSAVNLHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTV 393 >gi|269216089|ref|ZP_06159943.1| conserved hypothetical protein [Slackia exigua ATCC 700122] gi|269130348|gb|EEZ61426.1| conserved hypothetical protein [Slackia exigua ATCC 700122] Length = 488 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 115/346 (33%), Gaps = 25/346 (7%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV------ 64 I+ II + Y L A V+ A I + F + A+ Sbjct: 25 IGIVLIIAAAGYVSGVLSTPIAIVVWAAIFVLILRKPVAFFEAHGIPRVLGTALSYLLFA 84 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + P L + + S V A + +DI SE Sbjct: 85 LVLGLLGIVMFSPAFGLGDQLSSLIASVPSYVQEATRMWNDFSARYADIMQNTRVSEW-- 142 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S SL + F ++ + FG + + I F ++ F+ + ++ Sbjct: 143 -VDSMSSSLISWANDFAASSATGIV-----EFGAGLANSLMIIGFALVVAFWLLMELPAL 196 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S+++ L + + R ++I L + G+ G Y +AGVP+ L Sbjct: 197 SREMARLVPESRREGFDMLRRTTTRIIDGYLLATLAVCTIVGIACGILYIVAGVPNAGIL 256 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I + +IP + + + N A +F+ + V ++P L+ Sbjct: 257 AIIVGVFNVIPVIGHWIGLILVVVIAAFTNPVLALVVFIGTIVIQEAVYTFVQPKLMANS 316 Query: 305 IKLPFLPTFFGLVGGVRT-------MG-LLGLFIGPVLMALIAVIW 342 + + + L G G ++G+ I + AL ++ Sbjct: 317 VDVHPVLVILALFIGSAAGSAVQGLFGSVVGMLISIPVAALAKALF 362 >gi|327470450|gb|EGF15906.1| permease [Streptococcus sanguinis SK330] Length = 374 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 108/334 (32%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L + + + P+ K + + +I + L + +++L Sbjct: 37 VVNTILIPFLVGGFLYYITNPLVKFLQDKLKINRMIGILITLSLLFGLIALGVIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ LS P ++ LS + N Sbjct: 97 INQLSSLINSTQGLYWEIQSFVNQLSKNPL------FRNLNIQSTIQQLNLSYVDILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ + +I I L +F DG + L+ + Sbjct: 151 LNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISSLLT 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G++I A+ G + Y + G+ + + +++ +IP P Sbjct: 211 NLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + ++ I + L P +VGG +K+ + L+ G+ Sbjct: 271 MVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+ + +++ I K +KE Sbjct: 331 LGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQK 364 >gi|302392357|ref|YP_003828177.1| sporulation integral membrane protein YtvI [Acetohalobium arabaticum DSM 5501] gi|302204434|gb|ADL13112.1| sporulation integral membrane protein YtvI [Acetohalobium arabaticum DSM 5501] Length = 352 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 127/338 (37%), Gaps = 6/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I + L+ +L +F P + A +I PI +K + I ++ + I Sbjct: 14 IALLSLIFFEYLLIYFLPFIIAFLIASLIEPIVELLQTKLRLNRGLAVTICLGIILIIII 73 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +E+ +L + + G +W+ + L + + + Sbjct: 74 LLITIFLSRLFVELTKLANNIPEFKTLGARA-QWVVKQNQNLSRLLLELELPETVKEVIT 132 Query: 136 LSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + L I R + F + ++ +I+ FF RD I+Q + Sbjct: 133 QNLEHLYQQLRSMIQRGITTFLELLRGLPKFITILLVSLISTFFISRDKELINQTILRAF 192 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + K+ + I+ +++ + L G ++LG++ ++ Sbjct: 193 PRPWHKNINKLESEIMSAAIGFIRAELILISITTVLMITGLLLLGSDYAISLGLVAGLLD 252 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP G + + Y +I G+I L I + ++ + + ++G I + L Sbjct: 253 LIPVIGPSLVILPWAGYSMIIGDISFGVSLLAV-LITVAVIRQLVEAKVIGENIGIHPLA 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 T + GV+ +G+ G FIGP ++ L+ I + ++ Sbjct: 312 TLISMYLGVQILGIGGFFIGPAILILLRAIIRAGFASV 349 >gi|259501038|ref|ZP_05743940.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|302190513|ref|ZP_07266767.1| permease [Lactobacillus iners AB-1] gi|329920543|ref|ZP_08277275.1| putative membrane protein [Lactobacillus iners SPIN 1401G] gi|259167732|gb|EEW52227.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|328936219|gb|EGG32672.1| putative membrane protein [Lactobacillus iners SPIN 1401G] Length = 380 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 120/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIVNTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ LFF +DG I+ L S Sbjct: 163 NT----GKASFNLFLENLFGAVNVISMLIVTLLTAPFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|296876016|ref|ZP_06900074.1| membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296433007|gb|EFH18796.1| membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 375 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 110/334 (32%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L A + + + P+ + F +I V + + + + +L Sbjct: 37 VLNTILLPFLIAGFLYYITNPVVELLEKHLKIKRVFGILITLVLLFGIIGLGIFYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ + R LS P ++ LS + N Sbjct: 97 INQLTSLINSTQGLYWEVQSLVRKLSTNPL------FQNINIQSTIQQLNLSYMDILQNL 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ +I I L +F DG + L+ + + Sbjct: 151 LNSVTNSLGSVVNTIVNTVFILIMTPIFLVYFLVDGKKLLPMLERTILRNDKLHISSLLV 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G++I A+ G + Y G+ + + + + +IP P Sbjct: 211 SLNETVSRYISGISIDALIIGTLAYIGYSFIGLKYALVFAIFSGLANLIPYVGPTIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I ++ ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MIITYAFTDMDMMIKAVIYMLIIQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGI 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G+ + + ++ I K + ++ Sbjct: 331 IGMVVAIPVYSIGKEIVKFLVNLYDNHRAAQEQK 364 >gi|306838770|ref|ZP_07471604.1| permease [Brucella sp. NF 2653] gi|306843673|ref|ZP_07476273.1| permease [Brucella sp. BO1] gi|306275983|gb|EFM57692.1| permease [Brucella sp. BO1] gi|306406172|gb|EFM62417.1| permease [Brucella sp. NF 2653] Length = 413 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 51 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 105 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 156 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 157 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 216 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 217 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 276 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 277 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 336 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 337 SVGLHPVWLMFALFAFGSLFGFTGML 362 >gi|294674535|ref|YP_003575151.1| hypothetical protein PRU_1867 [Prevotella ruminicola 23] gi|294472780|gb|ADE82169.1| putative membrane protein [Prevotella ruminicola 23] Length = 366 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 117/335 (34%), Gaps = 15/335 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L P A ++ + +P K + L+++ T+ ++ + +++L Sbjct: 31 LSSVLLPFFVAWLLAYLLYPAVKFVQYKLHVGNRALSIVITLVLLIAVMAGVIYLI---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++ + R + I A +LW S S TF + Sbjct: 87 --IPPMIEQFEKLGSLATDYIRKEAHIKDIPGAIQLWINQNSREIEKFFKSATFTDSVKT 144 Query: 147 DF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + + S+I ++ +FF D ++ + +W+ + Sbjct: 145 VLPGLFNVLGQTATVVIGIVASLITLLY-MFFILLDYEYLTDNWIRIFPKKSRPFWQGLG 203 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + + + G +A+ G++ + + P + LG++ IM ++P + Sbjct: 204 KDAGQALNNYVRGQGTVALIMGILFCIGFTIIDFPMAIGLGIMIGIMDLVPYLHTFALIP 263 Query: 265 VSIYLLI----KGNIFNAT--CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L+ G F L + I D + P ++G + L L Sbjct: 264 TVLLALLKSADTGQNFWGILALALLVFIVVQLICDMIVTPKVMGKAMGLNPAILLLSLSV 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G +GL I L L+ +++ + EN+ Sbjct: 324 WGALLGFIGLIIALPLTTLLIAYYEQYVTKDTENE 358 >gi|306842023|ref|ZP_07474696.1| permease [Brucella sp. BO2] gi|306287864|gb|EFM59284.1| permease [Brucella sp. BO2] Length = 413 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 51 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 105 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 156 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 157 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 216 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 217 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 276 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 277 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 336 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 337 SVGLHPVWLMFALFAFGSLFGFTGML 362 >gi|257877479|ref|ZP_05657132.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811645|gb|EEV40465.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 399 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 113/341 (33%), Gaps = 7/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ +KK S +A I + ++ + Sbjct: 35 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLETKKIPRSASIAGIYLLILLLIVF 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + S L + +L + P +++ + ++ Sbjct: 95 AGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIMS 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + +T S +++ I FF R+ + SL Sbjct: 155 FIGDYWQTGAAGL-----SSLFSTISTLFIALFTGPIIAFFLLRNPNKFYFSVLSLVPPR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 210 FRKDFNEIVKISDLQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 269 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I F L W A++L D + P ++G +K+ + Sbjct: 270 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVV-PRVMGDRLKIHPITILV 328 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ MG++G+ G + L+ V+ K+ + Sbjct: 329 VLLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQRYNR 369 >gi|240143512|ref|ZP_04742113.1| membrane protein [Roseburia intestinalis L1-82] gi|257204547|gb|EEV02832.1| membrane protein [Roseburia intestinalis L1-82] Length = 442 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 115/330 (34%), Gaps = 21/330 (6%) Query: 31 FAPVLSALIIGFTSWPIYS------------SFISKKEESSTFLAVIATVSVMCLFIVPL 78 P++ ++I + PI SK++ T + T S++ L + + Sbjct: 71 LQPIIIGVVIAYLLNPIMKFLEGHLLKFLEPRMKSKRKAKKTSRGIAITGSLVFLVGICV 130 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + S + Q + +W+ ++ G +EL + + E Sbjct: 131 LLVAAIVPSISASIQSMITSFPQEAKDLTKWVDEVTNGD--TELASMIQQGVDKITDTVE 188 Query: 139 TFLKTNGIDFIPRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQ----LDSL 191 TF + + + + + + + L++I +I + D + Q + ++ Sbjct: 189 TFFEDDIFSKVQTYLTSITSGVIYGVKFVLNVIVGLIISVYVMADQEHFAGQAKKIVYAM 248 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + R ++ G + + G++ + +P V + VI + Sbjct: 249 FKPVRANVIVDTVRKSNEIFSGFISGKILDSAIIGVLAYIVLAIMKMPDTVLVAVIIGVT 308 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P S +++ N ++ + I + P ++G L Sbjct: 309 NVIPFFGPFIGAVPSFIIIVLQNPIQGLYFLIFIVVLQQIDGNIIGPKILGSSTGLSAFW 368 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F ++ G G+ +G LMA+I + Sbjct: 369 VVFAILVFGGLWGFPGMLLGVPLMAVIYYV 398 >gi|210617092|ref|ZP_03291402.1| hypothetical protein CLONEX_03624 [Clostridium nexile DSM 1787] gi|210149481|gb|EEA80490.1| hypothetical protein CLONEX_03624 [Clostridium nexile DSM 1787] Length = 382 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 113/352 (32%), Gaps = 18/352 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF------------LAVIA 66 ++L L F+ P + I F K + + + Sbjct: 30 VVLDGLGFIGRVIFPFVLGGAIAFVLNVPMHFIEEKFFGNKKMKENKWAKKFARPASFLI 89 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ + I ++F+ + + ++ V +W +I W Sbjct: 90 TILFVLGIIGIVVFVVAPALGDTA--MNLGRNIQAFIPQVQKWAENIFQDNKEIVKWIGS 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I S NG + + + + + ++ Sbjct: 148 MEFKWDEMIKSGIDFFKNGAGSVLGSTFEAAKSIVSGVTTFFIAFVFSCYILLQKEKLNV 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q+ + P W +I + + TF G + AI G + A + G+P + Sbjct: 208 QVRKVMYAFMPKDWTEILLALSSLTYKTFSNFLTGQCVEAIILGSMFFVAMTIFGMPYAL 267 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G++ + A+IP + L+ N A + + I + P +VG Sbjct: 268 LIGILISFTALIPIFGAFIGCVIGALLIFMVNPMQALIFVVMFLVLQQIEGNLIYPHVVG 327 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + LP + + G MG++G+ I + +++ +++ + + KE Sbjct: 328 NSVGLPSIWVLVAVSIGASLMGIVGMLIFIPIASVVYTLFRGIVHRRLKEKE 379 >gi|160881382|ref|YP_001560350.1| hypothetical protein Cphy_3257 [Clostridium phytofermentans ISDg] gi|160430048|gb|ABX43611.1| protein of unknown function UPF0118 [Clostridium phytofermentans ISDg] Length = 540 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 53/386 (13%), Positives = 119/386 (30%), Gaps = 31/386 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYF--------------LKGFFAPVLSALIIGFTSWPIYSSF 51 LN + + M++ V LY + G P + I F F Sbjct: 3 LNHNNVKKIMLIITFTVLLYVGIQHFDVILMTFKYILGILTPFILGGCIAFILNVPLCLF 62 Query: 52 ISKKEE------------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 K +++ + V + + +L + + Sbjct: 63 EDKLFRKGKTKNRFVNKIRRPVSILLSIILVASIIFTVTFLIIPELGSTFGDLADTITVF 122 Query: 100 NQHG-----IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 Q I L P + + ++K ++ + + L + Sbjct: 123 VQDAQKWVEIKSADLLIQYPEIGNSFKEFSKDWANLSAGLVSILKGLVYGVLGSAFSIIL 182 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 + + +F + L + + S + ++ + + Sbjct: 183 NIISGLTTFFIGFVFAVYILGNKEKLSEQGKKLCYSFLSLKRADRTIMVLQLAHRTFSNF 242 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 G I A+ G + + P + +GV+ + A+IP I + + +L+ N Sbjct: 243 LSGQCIEAVILGSMFYITLSVLRFPYALLIGVLISFTALIPIVGGIIGSIIGTFLIFMVN 302 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 A + + I + P +VGG + LP + F + G MG+LG+ I L Sbjct: 303 PVQALWFIVIFNVLQQIEGNLIYPRVVGGSVGLPSIWVLFAVTIGGSLMGILGMLIFIPL 362 Query: 335 MALIAVIWKESIMAIKENKEKISSNF 360 +++ + +E++ ++ + Sbjct: 363 TSVVYTLLRENVKVRLNQRQIPEEKY 388 >gi|327490117|gb|EGF21905.1| permease [Streptococcus sanguinis SK1058] Length = 374 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 108/334 (32%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L + + + P+ K + + +I + L + +++L Sbjct: 37 VVNTILIPFLVGGFLYYITNPLVKFLQDKLKINRMIGILITLSLLFGLIALGIIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ LS P ++ LS + N Sbjct: 97 INQLSSLINSTQGLYWEIQSFVNQLSKNPL------FRNLNIQSTIQQLNLSYVDILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ + +I I L +F DG + L+ + Sbjct: 151 LNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISSLLT 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G++I A+ G + Y + G+ + + +++ +IP P Sbjct: 211 NLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + ++ I + L P +VGG +K+ + L+ G+ Sbjct: 271 MVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+ + +++ I K +KE Sbjct: 331 LGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQK 364 >gi|318077539|ref|ZP_07984871.1| integral membrane protein [Streptomyces sp. SA3_actF] Length = 343 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 97/287 (33%), Gaps = 14/287 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + AL+I P+ + + T+ + + F+ + M + Sbjct: 1 MLAFVVALLITALLQPLVARLTRHGVPR-GLATALTTLFGFLVMGLMGWFVVWQIMDNVD 59 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L S+V + + RWL D P + ++ + + TN Sbjct: 60 QLSSQVQDGIE---DLRRWLLDSPFHVTEKQI--------NDIAKNLREAIGTNTDQLTS 108 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 I ++ ++ + F DG I L Sbjct: 109 AGIEGV-TIIVEMFTGLLLAFFSTIFLLYDGQRIWGWFLKLVPAAAREGVAGAGPRAWNT 167 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL- 269 + S G I+A+ + + +G ++ VP V L VI + A +P + A+++ + Sbjct: 168 LTSYVRGTVIVALIDAVFIGIGIYVLEVPMAVPLAVIIFLAAFVPLVGAVVSGALAVLVA 227 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 L+ ++ A + + I L+PF++G +++ L + Sbjct: 228 LVTQGVWAAIIVLGVVLLVQQIEGHVLQPFILGRAVRVHPLAVVLSV 274 >gi|225627209|ref|ZP_03785247.1| permease [Brucella ceti str. Cudo] gi|260563757|ref|ZP_05834243.1| ATP/GTP-binding protein [Brucella melitensis bv. 1 str. 16M] gi|260566711|ref|ZP_05837181.1| ATP/GTP-binding protein [Brucella suis bv. 4 str. 40] gi|261757926|ref|ZP_06001635.1| ATP/GTP-binding protein [Brucella sp. F5/99] gi|265999531|ref|ZP_05466792.2| ATP/GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|225618044|gb|EEH15088.1| permease [Brucella ceti str. Cudo] gi|260153773|gb|EEW88865.1| ATP/GTP-binding protein [Brucella melitensis bv. 1 str. 16M] gi|260156229|gb|EEW91309.1| ATP/GTP-binding protein [Brucella suis bv. 4 str. 40] gi|261737910|gb|EEY25906.1| ATP/GTP-binding protein [Brucella sp. F5/99] gi|263094520|gb|EEZ18329.1| ATP/GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|326408734|gb|ADZ65799.1| permease [Brucella melitensis M28] gi|326538454|gb|ADZ86669.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 413 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 51 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 105 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 156 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 157 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 216 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 217 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 276 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 277 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 336 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 337 SVGLHPVWLMFALFAFGSLFGFTGML 362 >gi|327459398|gb|EGF05744.1| permease [Streptococcus sanguinis SK1] Length = 365 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 121/336 (36%), Gaps = 17/336 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F ++ +A + + + ++ Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLDKCRVPQKLQRGLALILEVLILVL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + V+++ P V +WL G+ +S Q+ Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQ--SGLLSSSQLKDLTKQLQNSD- 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + IF ++ S+I I +F F + L + L Sbjct: 144 -----IVNRAISLLGSLTGNISAIFGNFF-SVIMSIFLMFAFLSSKEHLQTITSRLLQVL 197 Query: 196 FPAYWKKISRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P K V VI T +G I A+ G+++ AY L G+P GV+ ++ Sbjct: 198 LPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVL 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + IP P S A+ + + + A I + P +VG + LP L Sbjct: 258 SFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLF 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + G GL+G+ + A+I + +E ++ Sbjct: 318 TLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVV 353 >gi|304316714|ref|YP_003851859.1| hypothetical protein Tthe_1261 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778216|gb|ADL68775.1| protein of unknown function UPF0118 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 343 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 131/351 (37%), Gaps = 17/351 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 +N + I + M I+++ LYF +K P+ +++I + P S F K Sbjct: 3 INKKYITYIIAMIIVILFLYFVFRNIDKIKEILFPIFISILIAYLVNPFVSFFEDK-GIK 61 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 +I ++C+ + +LF+F EM L + + + Sbjct: 62 RVQSIIIVYFLLLCIMALTVLFIFPIITNEMSSLFKMLPGYIDDLTYKINDIKNNYLAYL 121 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E T + L + + + I + L++I I F+ Sbjct: 122 PKEFSTVLVKRTSMLNKEIASMIDASIQSII---------SLTGHILNLILTPIITFYLL 172 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + + KI + + V+ G I+I ++ + V Sbjct: 173 KDKDILKSEIKEIIPENMRGRFSKILKDLDSVMSKYIRGQIYISIIVTVLTSIGLMIIKV 232 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 V +G++ I+ +IP PI + +I + + +++ F+ + I P Sbjct: 233 KYSVLIGILAGILNIIPYFGPILGSIPAIVMGLIDSLYKGIWAFVIFFLVQQIESAFFAP 292 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ + L + L+ G + G+ G+ + ++A++ V+ K+ + + Sbjct: 293 KIMSDSVDLHPITVIIALLVGEQFFGIWGMLLSVPVVAMVKVMLKDVFIEV 343 >gi|116512689|ref|YP_811596.1| permease [Lactococcus lactis subsp. cremoris SK11] gi|116108343|gb|ABJ73483.1| Predicted permease [Lactococcus lactis subsp. cremoris SK11] Length = 371 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 116/345 (33%), Gaps = 15/345 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + +++F++ + + F P + A + + P+ + K + F Sbjct: 13 EILAVTLLIFLLTKIQFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLKIKKVF 72 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + ++ + I + + + ++ L++ + + W+ + S Sbjct: 73 GIFIVLILILGMIIFAVASVIPSLITQLTSLIN---ATGKAYPQIRTWIEGLQHNPRFSH 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFY 178 ++ + +SL + + G I I+ MI I L++ Sbjct: 130 IYEQL--DIKSLVERLNLSYTDILHNLLNSITISVGSIVSIITSIIMVMILVPILLYYML 187 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG I L ++ + I G+ + A+ +V+ Y + G+ Sbjct: 188 KDGEKIIPFLKENVLTEDKLNIFELLENMNHTISRYISGVALDALLVFIVVFVGYMVLGI 247 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IP P + + A ++ + + + P Sbjct: 248 PYAFLFALFAGVTNLIPYAGPYIGVLPMVVTVAFNRPITALIAVIYVLVLQQLDGNLVYP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +VG +K+ + ++ G+LG+ I L+ I K Sbjct: 308 KIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVK 352 >gi|294852072|ref|ZP_06792745.1| hypothetical protein BAZG_00988 [Brucella sp. NVSL 07-0026] gi|294820661|gb|EFG37660.1| hypothetical protein BAZG_00988 [Brucella sp. NVSL 07-0026] Length = 413 Score = 86.0 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 109/326 (33%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L F + + + P+ K S +++ + Sbjct: 51 GAMAFFVLFLVVFSS-VLLPFVVGMA----LAYFLDPVADRLE-KVGLSRLAASIVILLI 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 105 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 156 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 157 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 216 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 217 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 276 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 277 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 336 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 337 SVGLHPVWLMFALFAFGSLFGFTGML 362 >gi|319946477|ref|ZP_08020714.1| membrane protein [Streptococcus australis ATCC 700641] gi|319747445|gb|EFV99701.1| membrane protein [Streptococcus australis ATCC 700641] Length = 375 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 110/333 (33%), Gaps = 6/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L A + + + PI K + ++ V++ L I ++++ Sbjct: 37 VLNTIILPFLIAGFLYYITNPIVEFLEKKFHLNRILGILLTLVTLFGLIIYGIVYILPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ LS P ++ LS + N Sbjct: 97 INQLTSLINSTQGLYWEVQSFVTKLSKNPAFQSI------NIQSTIQQLNLSYVDILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ ++ I L +F DG + L+ + Sbjct: 151 LNSVTNSLGSVVSTIVNTLFILVMTPIFLVYFLIDGKKLLPMLERTILKNDRRNITSLLV 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G++I A+ G + Y G+ + + +A+ +IP P Sbjct: 211 SLNQTVSRYISGISIDALIIGTLAFIGYSFIGLKYALVFAIFSALANLIPYIGPTIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MVVTYAFTDFNMMVKAVIFMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+ + + ++ I K + +K+ Sbjct: 331 IGMIVAIPVYSIGKEIVKFLAALYENHKKTQKQ 363 >gi|89097465|ref|ZP_01170354.1| hypothetical protein B14911_27740 [Bacillus sp. NRRL B-14911] gi|89087761|gb|EAR66873.1| hypothetical protein B14911_27740 [Bacillus sp. NRRL B-14911] Length = 372 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 118/333 (35%), Gaps = 5/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ + + F P+ + ++K T +I + ++ L ++ + L Sbjct: 39 FVSTLFFPIIISGFLYFLLNPVVNFLQARKLPR-TLAIIIIYLIIIGLIVLVIGSLVPII 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L + + Q LS + P S Sbjct: 98 SKQVTALFNDLPTYAQRTRIYLENLSS----SQQFKWVMNQDYVPIENLERSLMEFANTI 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D + S + + ++I+ + LF+ ++DG + + + K + Sbjct: 154 PDRVTNGISNVFSLVANITVTIVTVPFLLFYMFKDGGRFPAAISKFLPLSYRSEGLKTLK 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G +A+ G + Y + +P + L +I A+ +IP P A Sbjct: 214 ETGETLAAYIQGQVTVALFVGTLAFIGYMIIDLPYALVLALIVAVTNIIPYVGPFLGGAP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + A+ + L P ++G + L+ G+ Sbjct: 274 AVLIALFDSPAKAILAIIVIAVAQQVEGNILSPLILGKRLDTHPATIIILLLVAGNLAGI 333 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LG+ + A++ I + ++ +E + S Sbjct: 334 LGMILAIPTYAVVKTIVMNFVRFLRAKRESVVS 366 >gi|242310532|ref|ZP_04809687.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522930|gb|EEQ62796.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 353 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 142/354 (40%), Gaps = 20/354 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL--KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 M N +G +++ FI+ + F +L A ++ + I+ + K + S F Sbjct: 1 MSNSKGSYFFLVAFILTLLALLKLYSPFLMNLLIAFLLFIATQSIFQIILKKIK-SEFFS 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +++ T+ ++ L +P +Y + + + V L I I + Sbjct: 60 SLLMTLLLLLLCFMP----IFYVAINLASFATNVDLNGFQNIFALMQQKLINFSRQFFDY 115 Query: 123 WTKHLSHP-QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +SL + + + I F ++ + + +F+++ LFFFY G Sbjct: 116 LPSAVQQEVESLLLRINSIDWAEIVKKILGFIAKLSANSIYFVSDAVFIVVFLFFFYFYG 175 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + K + V VI F + + +G++ G G + Sbjct: 176 NKLGKYFIEVIP-IDKQQIKSLYDEVSAVISVVFYSSILSMVLQGMLFGILMAFYGY-NA 233 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP- 298 + LGV ++IP G + + V+ Y L GN NA + L+ I + I D ++P Sbjct: 234 ILLGVFYGFASLIPVVGGTLVWLPVACYELYLGNFTNAIIITLYSIIVIATIADNGVKPF 293 Query: 299 -------FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ P+K+ + FF ++ G+ + G G+ +GP + AL + + Sbjct: 294 IIAFINRVLIEEPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITALFIAMLRIY 347 >gi|229829964|ref|ZP_04456033.1| hypothetical protein GCWU000342_02070 [Shuttleworthia satelles DSM 14600] gi|229791262|gb|EEP27376.1| hypothetical protein GCWU000342_02070 [Shuttleworthia satelles DSM 14600] Length = 397 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 106/342 (30%), Gaps = 22/342 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFIS--------KKEESSTFLAVIATVSVMCLFIVPL 78 + G P++ +++ P+ +K + I ++ + +F Sbjct: 47 ITGILKPLVFGIMVALLLSPVVHRLERGFSHVPILRKHRTRGLSVAITVLAALLVF---- 102 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 FL +L + V I + I G +S + Sbjct: 103 -FLVASLLLSSLTNSLQAVSVENLKIIANNFQESISGIWSLVTEVMDRFHIDRSFLQEA- 160 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 N ++ A+ + + F +I +F D + + P Sbjct: 161 ---VNNASNWARNSATSAAKGVTGFMTTAFFSLIFSIYFMADHEGFIAYWTKAAKSILPE 217 Query: 199 Y----WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + G + A+ G+ + L VP + +G++ I +I Sbjct: 218 REYSYFMEFLGNAGHAFIGYVRGQLLDAVFVGVTMSIILSLIEVPYALLIGMMMGIGNLI 277 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTF 313 P P ++ + + + L + +D + P ++ + + + Sbjct: 278 PYVGPAVGYVSVTFVCVFAQDHSKLLIALIAVFVVTTIDGNVINPRILSNAVSVHPVLVI 337 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ G G+ G+F+ + +LI + + + + E ++ Sbjct: 338 AALLVGSAVGGVTGMFLAVPVASLIRIYFDKLVDWRCEETDE 379 >gi|125718561|ref|YP_001035694.1| permease, putative [Streptococcus sanguinis SK36] gi|323351040|ref|ZP_08086697.1| membrane protein [Streptococcus sanguinis VMC66] gi|125498478|gb|ABN45144.1| Permease, putative [Streptococcus sanguinis SK36] gi|322122764|gb|EFX94473.1| membrane protein [Streptococcus sanguinis VMC66] gi|325687092|gb|EGD29115.1| permease [Streptococcus sanguinis SK72] gi|325690976|gb|EGD32976.1| permease [Streptococcus sanguinis SK115] gi|325695077|gb|EGD36980.1| permease [Streptococcus sanguinis SK150] gi|327462046|gb|EGF08375.1| permease [Streptococcus sanguinis SK1057] gi|327462955|gb|EGF09276.1| permease [Streptococcus sanguinis SK1] gi|327474559|gb|EGF19964.1| permease [Streptococcus sanguinis SK408] gi|328946877|gb|EGG41014.1| permease [Streptococcus sanguinis SK1087] Length = 374 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 108/334 (32%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L + + + P+ K + + +I + L + +++L Sbjct: 37 VVNTILIPFLVGGFLYYITNPLVKFLQDKLKINRMIGILITLSLLFGLIALGVIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ LS P ++ LS + N Sbjct: 97 INQLSSLINSTQGLYWEIQSFVNQLSKNPL------FRNLNIQSTIQQLNLSYVDILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ + +I I L +F DG + L+ + Sbjct: 151 LNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISSLLT 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G++I A+ G + Y + G+ + + +++ +IP P Sbjct: 211 NLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + ++ I + L P +VGG +K+ + L+ G+ Sbjct: 271 MVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+ + +++ I K +KE Sbjct: 331 LGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQK 364 >gi|163790574|ref|ZP_02185003.1| Putative transport protein [Carnobacterium sp. AT7] gi|159874177|gb|EDP68252.1| Putative transport protein [Carnobacterium sp. AT7] Length = 364 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 113/318 (35%), Gaps = 11/318 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A + + P+ K + ++ +F++ L F+ + Sbjct: 39 FVSTLFTPIIIAGFLYYLLNPLIGQLEKIKIKRKY--------GIIIVFLLFLGFIVFLA 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSETFLKT 143 + + L+ ++ V + L + + + + + E T Sbjct: 91 ISVIPNLIEQLGQLITSIPSVLKKLEEYSNELLQKPMLKNFDLEKSIGKMDLSIENIANT 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 S G + + I + I LF+ ++DG + + ++ Sbjct: 151 IFTTLTASVGSLIGA-LANTTIVIFTVPIILFYMFKDGKHFRPAVAKFFPKDYRGQMIEL 209 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + I S G ++ + + Y + G+P + LG+I + +IP P Sbjct: 210 LGQMNETIASYISGQALVCLFVAVFTYLGYMITGMPYGLLLGIIAGVTNIIPYIGPYIGA 269 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 A ++ + + + A + L + I + P ++G + + L L+ Sbjct: 270 APAVIIALTISPTQALLVVLVVLVVQQIDGNFISPNVIGKTLSIHPLTIIIILLVAGNIA 329 Query: 324 GLLGLFIGPVLMALIAVI 341 G+LG+ +G A++ I Sbjct: 330 GILGMILGVPTYAVVKTI 347 >gi|327330561|gb|EGE72308.1| putative permease [Propionibacterium acnes HL096PA3] Length = 386 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLMGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|297616545|ref|YP_003701704.1| hypothetical protein Slip_0355 [Syntrophothermus lipocalidus DSM 12680] gi|297144382|gb|ADI01139.1| protein of unknown function UPF0118 [Syntrophothermus lipocalidus DSM 12680] Length = 341 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 116/338 (34%), Gaps = 12/338 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ LY ++ P A+++ + +P+ + ++ ++ + + Sbjct: 16 ILVVLATSYFLYLVRQVMTPFAVAVVLAYLVFPVVHRIE-RIGIGRSYAILLVYLGAAAV 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + E+ + G +P ++ E + + Sbjct: 75 AGAVFYYAVPAMVREVGAV----------GALIPHYVGQAEQMAHRVENMAFNADSIDQM 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ RF F LSIIF I F+ +D I + Sbjct: 125 VDEAVERGRSYLYGLFRRFLEAI-FNFAHSILSIIFAPILAFYLTKDWEKIRDGFLDILP 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K+ R + V++ G ++A+ G + G L V + +G+I A+ + Sbjct: 184 VSARQDTIKLGRDIDGVLKEFIKGHLLVAVLVGSMTGLGAALLKVKFALLIGMICAVAEL 243 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P PI S+ L + A + + + L P ++GG + L L Sbjct: 244 FPYFGPILGAIPSVGLAYAQSPRLAAYVAFIILVVQQVEASILSPRILGGKVGLHPLVVV 303 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F L+ G G+ G+ + + A+I ++ + E Sbjct: 304 FALLAGGELYGIWGMLLAVPVAAVIKILGSFFFYKVVE 341 >gi|314968334|gb|EFT12433.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] Length = 386 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQGH--------IAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|312868423|ref|ZP_07728623.1| putative membrane protein [Streptococcus parasanguinis F0405] gi|311096168|gb|EFQ54412.1| putative membrane protein [Streptococcus parasanguinis F0405] Length = 375 Score = 86.0 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 107/318 (33%), Gaps = 6/318 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L A + + + PI + F +I V + L + + +L Sbjct: 37 VLNTILLPFLIAGFLYYITNPIVELLEKHLKIKRVFGILITLVLLFGLIGLGIFYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ + R LS P ++ LS + N Sbjct: 97 INQLTSLINSTQGLYWEVQSLVRKLSTNPL------FQNVNIQSTIQQLNLSYMDILQNL 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ +I I L +F DG + L+ + + Sbjct: 151 LNSVTNSLGSVVNTIVNTVFILIMTPIFLVYFLIDGKKLLPMLERTILRNDKLHISSLLV 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G++I A+ G + Y G+ + + + + +IP P Sbjct: 211 SLNETVSRYISGISIDALIIGTLAYIGYSFIGLKYALVFAIFSGLANLIPYVGPTIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I ++ ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MIITYAFTDVDMMIKAVIYMLIIQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGI 330 Query: 326 LGLFIGPVLMALIAVIWK 343 +G+ + + ++ I K Sbjct: 331 IGMVVAIPVYSIGKEIVK 348 >gi|302553875|ref|ZP_07306217.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302471493|gb|EFL34586.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 465 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 113/320 (35%), Gaps = 23/320 (7%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V +SAL+I P ++ A T Sbjct: 107 LLVLAGTLWVLMRVISAVQLVVLAFVSALLITALLQPTVGRL--RRLGVPRGPATAMTAI 164 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLS 128 + + + + ++ ++ E + + Q+GI R WL + P + ++ + Sbjct: 165 LGFVV---MGLIGWFVTWQVMENIDDLSGQIQNGIDELRNWLLNSPFHVTDKQINEIAKN 221 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ ++ + ++ I+ + + F DG I + Sbjct: 222 LREAVGANTDQITSAGLEGV---------TVVVEALTGILLAVFSTLFLLYDGKRIWEWT 272 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 273 LRLVPAAARPGMAGAGPAAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFI 332 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + A+++ + L+ +F A + I L+PF++G +++ Sbjct: 333 FLFAFIPLVGAVVSGALAVVVALVTQGVFTAVMTLVVVLAVQQIEGHILQPFILGRAVRV 392 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 393 HPLAVVLSVAAGGMVAGIGG 412 >gi|293385024|ref|ZP_06630858.1| membrane protein [Enterococcus faecalis R712] gi|293389294|ref|ZP_06633756.1| membrane protein [Enterococcus faecalis S613] gi|312906013|ref|ZP_07765026.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909359|ref|ZP_07768215.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|291077702|gb|EFE15066.1| membrane protein [Enterococcus faecalis R712] gi|291081458|gb|EFE18421.1| membrane protein [Enterococcus faecalis S613] gi|310628008|gb|EFQ11291.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311290383|gb|EFQ68939.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 404 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 112/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 63 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 121 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 122 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 175 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 176 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAVQRFLPEKRKDDIVDLLG 235 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 236 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 295 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 296 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 355 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I +K + + +N Sbjct: 356 LGIFLGVPFYAICRTTIYYVIDMVKAGRSEKVTN 389 >gi|270264618|ref|ZP_06192883.1| hypothetical protein SOD_i00350 [Serratia odorifera 4Rx13] gi|270041301|gb|EFA14400.1| hypothetical protein SOD_i00350 [Serratia odorifera 4Rx13] Length = 356 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 121/358 (33%), Gaps = 16/358 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ + LYFL G P+L A+++ + WP + + S Sbjct: 10 RRRFTDPQAIALLVILVAGFLILYFLHGILTPLLVAIVLAYLLEWPTAR--LQRIGCSRN 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 + A + + + ++ + + + L++ + + NQ P + A Sbjct: 68 WAASLVMIMFAGIAMLLVFVVAPTAWQQGINLMTDLPGMLNQFYNFAATLPKRYPALVDA 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L + E+ +K + + L + +I + + +FF + Sbjct: 128 GIIDMMAENLRGRLSGMGESVVKFSLASLV---------GLLTLAIYLILVPMMMFFLLK 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + + + I + G + + G+ + + + Sbjct: 179 DKEQMLNAVRRVLPRNRGLAGQVWIE-MNQQITNYIRGKVLEMVIVGVATYLVFVILDMR 237 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V+ +IP + T + + G + L + + + L Sbjct: 238 YSLLLAVLVGFSVLIPYIGAVLVTIPVVVVAMFQWGVGADFWTLIVAYLVVQALDGNLLV 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L + L L ++ G G+F L L+ + ++ E+ Sbjct: 298 PILFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDELRVETEQ 355 >gi|319786686|ref|YP_004146161.1| hypothetical protein Psesu_1080 [Pseudoxanthomonas suwonensis 11-1] gi|317465198|gb|ADV26930.1| protein of unknown function UPF0118 [Pseudoxanthomonas suwonensis 11-1] Length = 398 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 134/352 (38%), Gaps = 16/352 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ + L + L P + ++G+ P+ + V Sbjct: 16 QQLKWIVLALVALWMVGLLAPILTPFVLGALLGWMGDPLVDRLERAGRSRN--------V 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKH 126 +V +F + L L ++ + L +V + W D +P + L Sbjct: 68 AVTLVFGLMTLLLVLALLILVPMLERQVRTLVETLPEYREWFVDTAVPWLEARTGLELSV 127 Query: 127 LSHPQSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 P+ + G + + SR G + + ++++ + I F+F RD + Sbjct: 128 WLDPERAVNWVREHWQQAGGVATSVAGYISRSGFAMVAWVVNLVLLPILTFYFLRDWDLL 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ +L +++R V+ + G ++ I G + L+G+ + + Sbjct: 188 VERVAALVPRDHLDTVTRLARESNDVLGAFLRGQFVVMIALGAIYAIGLQLSGLKLGLLI 247 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE---LFIVDKTLRPFL 300 G+I +++ IP GA + L++ F+ L L G + + L P + Sbjct: 248 GLIAGLISFIPYLGATTGIVLAVVAALVQAQGFDTRLLVLVGVVFTVGQLLESYVLTPRI 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG I L + F ++ G + G LG+ I A+I V+ + + +++ Sbjct: 308 VGDKIGLHPVAVIFAVMAGGQLFGFLGMLIALPAAAVINVLLRYAAERYRQS 359 >gi|119469488|ref|ZP_01612392.1| predicted inner membrane protein [Alteromonadales bacterium TW-7] gi|119447023|gb|EAW28293.1| predicted inner membrane protein [Alteromonadales bacterium TW-7] Length = 359 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 119/355 (33%), Gaps = 14/355 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++ + + LYF PVL AL+I + WP+ + + VI Sbjct: 15 DPHSVTLLFLLLVSVALLYFFGSLIVPVLVALVIAYLLDWPVVH--LERLGLRRFTATVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + +L + + LV + + G L + + ++ Sbjct: 73 VMLIFTGIMLTLILVIGPVLWKQTSNLVQETPHMLEQGKSYLVALPEQYPSLINADQVQG 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ ++ I + F+ + + + ++ + + +FF +D ++ Sbjct: 133 IVATVEAKVIEL--------GQVVLSFSLTSLKDVVAWLIYLVLVPLLVFFMLKDKLELT 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ + + I + G + G V A+ + LG Sbjct: 185 GSVAKLIPQQRRLIL-QVWNEMNQQIMNYIRGKVFEILIVGGVSFIAFTFLDLRYAALLG 243 Query: 246 VITAIMAMIPG-GAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA + ++ L G + + I + L P L Sbjct: 244 VLVGFSVLIPFVGAALVTIPVAAVALFQFGLETQFWTILIIYGIIQALDGNVLVPLLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L +L+ + +E K++ Sbjct: 304 AVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALITAWSSTQEELNNKLTE 358 >gi|84501590|ref|ZP_00999762.1| membrane protein [Oceanicola batsensis HTCC2597] gi|84390211|gb|EAQ02770.1| membrane protein [Oceanicola batsensis HTCC2597] Length = 357 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 125/340 (36%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I L++L+++ P L + + P+ S I T+ + +F++ Sbjct: 16 AAIFLLALWWMGDVILPFLLGGAVAYFLDPVADRIEDA-GASRAVATAIITLFGLLIFVL 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + +L V + EL + +SL + Sbjct: 75 LALLVIPNLIDQAIQLFDTVPKVLHNFQAFLT--------SRFPELLDDGSTIRRSLTSV 126 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ET +++ G + + G ++ + + + + F+ D + + +D L Sbjct: 127 GET-IQSRGGQLLETALTSVGS-LINIVMLFVIVPVVAFYLLYDWDRMMEDIDDLLPREH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++R + + + S GM + + G A L G+ + +G + ++ IP Sbjct: 185 APAIRRLAREIDETLASFIRGMGTVCLILGTYYAIALMLVGLQFGLVVGAVAGLITFIPY 244 Query: 257 GAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTF 313 + A++I L + + + G L V L P LVG + L + Sbjct: 245 VGALVGGALAIGLALFQFWGDWVSIGLVAGIFVLGQVVEGNILTPKLVGDSVGLHPVWLI 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A I V+ + + KE++ Sbjct: 305 FALSVFGSLFGFVGMLVAVPVAAAIGVLMRFVVSQYKESR 344 >gi|299769104|ref|YP_003731130.1| hypothetical protein AOLE_04300 [Acinetobacter sp. DR1] gi|298699192|gb|ADI89757.1| hypothetical protein AOLE_04300 [Acinetobacter sp. DR1] Length = 397 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 126/334 (37%), Gaps = 18/334 (5%) Query: 28 KGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-L 81 K P + A + + P+ S F+ + T+++ ++VPL++ Sbjct: 26 KPVVIPFIGAFFLAYLFSPLVDVLVKIKLPRWLAISVVFIGIGVTLTIALWYLVPLIWKQ 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + + + W+S ++ +++ +T Sbjct: 86 LVYARDSIPAGIHWINAE------LLPWVSST---FNVQQMEIDTDQMSKAVMDYVQTNY 136 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + ++ G+ F+ +++ + I F+F D + Q L L + A Sbjct: 137 SADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTL 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I V+ + G ++ + G+V L G+ + +G++ + ++IP Sbjct: 197 QIVGECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAV 256 Query: 262 FTAVSIY--LLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ L G + + + + I + L+PFL+G I L + F ++ Sbjct: 257 GIIAAVIASLFQFGLDWMHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLA 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G + G LG+ I + A+I V+ K + + Sbjct: 317 GAQLAGFLGMLIALPVAAVIVVLLKHLRENYERS 350 >gi|294635431|ref|ZP_06713920.1| permease, PerM family [Edwardsiella tarda ATCC 23685] gi|291091200|gb|EFE23761.1| permease, PerM family [Edwardsiella tarda ATCC 23685] Length = 356 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 122/362 (33%), Gaps = 16/362 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I I+ + +YF G AP+L A+++ + WP + S Sbjct: 7 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTNK--LEGIGCSRI 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 + + + + + +V +L L + L+ + + + P M A Sbjct: 65 WAVCVVLLVFIGIVLVTMLVLIPIVWQQGLGLMGDMPKMVTRFYEYAATLPRRYPALMDA 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + ++ E+ LK + + + + ++ + + +FF + Sbjct: 125 GIIDVVVENLRARMALMGESVLKFSLASLV---------GMVTLAIYLVLVPLMVFFLLK 175 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + L + + + + I + G + I G+ + + G+ Sbjct: 176 DKEQMLNALRRVLPRERGLAGQVWLE-MNQQITNYIRGKVVEMIVVGVATYLVFLILGLN 234 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLR 297 + L V+ + +IP GA + V + L + + LF+ + + L Sbjct: 235 YGLLLAVLVGVSVLIPYIGAVLVTIPVVLVALFQWGMGADFWTLFIAYLVVQGLDGNVLV 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L + L L ++ G G+F L L+ + + Sbjct: 295 PLLYSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDDFGNEAPGDT 354 Query: 358 SN 359 + Sbjct: 355 AK 356 >gi|255650757|ref|ZP_05397659.1| hypothetical protein CdifQCD_11271 [Clostridium difficile QCD-37x79] Length = 327 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 108/321 (33%), Gaps = 2/321 (0%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A ++ + P+ SK + ++ ++ + I +LF + + Sbjct: 4 LTPFIIAFVLAYIFNPLVKFLESKLNFKRIYSLLLTYGVLIVILISFILFTVPSIVNSLA 63 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +LV+++ L + + L + S + + G I Sbjct: 64 DLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTLKEYGDKIMSVMPKFSNLLIGSLGG--IF 121 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G + + L I L + + + + + ++ + + Sbjct: 122 STTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDFIIELCQSLNLN 181 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I F G + + G++ G + + G + +M M+P P+ A + + Sbjct: 182 IGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTLMGVMNMVPYFGPVIGMAPVVIIN 241 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + N A ++ I + + P +VGG + L T + G G+ G+ + Sbjct: 242 LFSNPTIALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVGGGFFGIPGMIL 301 Query: 331 GPVLMALIAVIWKESIMAIKE 351 +M +I + + E + + Sbjct: 302 SAPVMGVIKIYFCEFVNRRHD 322 >gi|170746926|ref|YP_001753186.1| hypothetical protein Mrad2831_0492 [Methylobacterium radiotolerans JCM 2831] gi|170653448|gb|ACB22503.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 374 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 118/356 (33%), Gaps = 16/356 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ + + + +Y L+ P ++ + + + P+ +I Sbjct: 1 MRARAVIGLAAVVALGLIVYLLREVMLPFVAGITLAYLLDPLADRLERLGLGRLAASLLI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V+ L + L+ + ++VV + L I + L Sbjct: 61 LALFVVALVVTLLILIPLTA--------NQVVALVNALPGMVSRLQAIIAERSGTLLERV 112 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + S L T ++ F + ++ + F+ D Sbjct: 113 GGANVLNELQSSVGTLATQAGTWLLAFLKSLWSGSQALISIASLLVVTPVVAFYILVDWD 172 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +D A ++++R + + G T++ + G WL G+ V Sbjct: 173 RMVAAIDGWVPPRHRATVRELARQIDGAVTGYVRGQTLVCLILGSFYAIGLWLVGLNFGV 232 Query: 243 ALGVITAIMAMIPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +G+I + IP G +S + + + + F+ + Sbjct: 233 LIGLIAGFLTFIPYVGTLTGFLLSVGVALVQFWPSADWLHLGLTVGVFLVGQFLEGNVIS 292 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P LVG L + F L+ G +GL + + A I V+ + ++ E++ Sbjct: 293 PKLVGDSTGLHPVWLMFALLAFGTLFGFVGLLLAVPIAASIGVLVRFALARYLESR 348 >gi|167769436|ref|ZP_02441489.1| hypothetical protein ANACOL_00766 [Anaerotruncus colihominis DSM 17241] gi|167668404|gb|EDS12534.1| hypothetical protein ANACOL_00766 [Anaerotruncus colihominis DSM 17241] Length = 438 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 107/339 (31%), Gaps = 11/339 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVMCLFI 75 + G P + A I + P+ ++ + + Sbjct: 43 VAGLLMPFVYAFGIAYILNPVLKVVERVFLRRLFGTRIGDKPMRALAILLTYLFSAGMIA 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +L + L++K+ L + G S L + Sbjct: 103 IFAKIVLPQLVLSISGLIAKMTAYLNSTETWLPGLLALLGDFDISATIETALRQYADTIM 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + ++ ++ L + II I L R I + ++ Sbjct: 163 SSAMTMLKQLFPWMLSVSTGIASGLLTIVVGIIISIYMLMDKERFCAGIKKIWYAVLPKK 222 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ V G + ++ G++ L G+PS + + VI + +IP Sbjct: 223 NADWILDLAAEANHVFGGFIGGKILDSLIIGILCFIGMSLLGMPSAMLVSVIVGVTNVIP 282 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S ++++ A ++ I L P ++G L F Sbjct: 283 YFGPFIGAIPSFFIILIDAPIKALWFLVFILILQQFDGNILGPKILGDSTGLSAFWVIFA 342 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G +G+F+G + ++I ++ + I + +E Sbjct: 343 IMLFGGLYGFIGMFLGVPVFSVIYMLIQRFIDSRLSARE 381 >gi|26988399|ref|NP_743824.1| hypothetical protein PP_1667 [Pseudomonas putida KT2440] gi|24983154|gb|AAN67288.1|AE016355_6 transporter, putative [Pseudomonas putida KT2440] Length = 357 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 123/342 (35%), Gaps = 14/342 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I V LY L P L +++ + + P+ + V+ +F + Sbjct: 13 ALLIAVLLYSLHNILTPFLVGIMLAYLADPLVDRLERLGLSRTW--------GVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK---HLSHPQSL 133 L L ++ + L ++V + + WL + L Sbjct: 65 FTLLLLALLLVLVPMLAKQLVRLYELAPQMLDWLEHVALPWVQGRLGLADGFWKFDKIKA 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + T+ + + A+ + + + +++ + + F+ RD + +L L Sbjct: 125 AIGAHMGQTTDIVGMLLSQATASSLALVAWLANMVLIPVVGFYLLRDWDLMMGKLRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + L G+ + +G++ + A+ Sbjct: 185 RQREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLAGLAAI 244 Query: 254 IPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P I ++ G+++ + + + L P LVG I L + Sbjct: 245 VPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F ++ G G G+ + + A+I V+ + KE+ Sbjct: 305 AVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKES 346 >gi|157827022|ref|YP_001496086.1| permease PerM-like protein [Rickettsia bellii OSU 85-389] gi|157802326|gb|ABV79049.1| Permease PerM-like protein [Rickettsia bellii OSU 85-389] Length = 351 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + I + + P A II + P SK + S+ +++ Sbjct: 1 MNKTAIFWLLFIGIFISGFMLISEAIRPFFIAFIISYLLQPAIEFVASKFKLSNKISSIV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F L L ++ V+ + + +P M Sbjct: 61 VYLIFLSIFFTALTLLVPVIYGQVSTFVNNIPKYKDYFQAEI-----LPPIMTKIYAVEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ + + + + + +I ++ + + + I LF+F RD I Sbjct: 116 NIADKIRDSLSNFINSIFTILGSLANNFWHYTLITINIFVLFLLIPIILFYFLRDWTRII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + SL I + ++ + G I + + ++ + G+ + LG Sbjct: 176 ENMKSLLPLKSRHKILGILSSINSLLAAYIRGQLNICLLLSIYYSISFSIIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP F ++I L G + + I L P ++G Sbjct: 236 ILTGFLVIIPFIGTFISCFLTLTIGYLTFGATTQLFYIMVVYIIGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G +G+F + + ++ I K ++ Sbjct: 296 KIGLHPLWIIFSIFACGSLFGFIGIFFAIPIAGVTKILLFNIIKFYKSSR 345 >gi|241895545|ref|ZP_04782841.1| permease [Weissella paramesenteroides ATCC 33313] gi|241871123|gb|EER74874.1| permease [Weissella paramesenteroides ATCC 33313] Length = 382 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 107/323 (33%), Gaps = 4/323 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP++ A + F P+ + I + + L I L + ++ Sbjct: 56 APIIIAGVFYFLLNPMVDWAERRFNFPRIATISIQFIVLAVLIIWGLAVFIPWMSSQIIS 115 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV++ + + + ++ + S + G+ + Sbjct: 116 LVNEWPTYWHKIVTMINHFTSNKQFNAVNKWFNTTNSEISTWLKDYSAEYAKKGLHGVSS 175 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 ++II LF+ +DG + + + ++ + + I Sbjct: 176 VV----GTVTSVVIAIITFPFVLFYLLKDGHQMPAYIAKFLPVKARRSFLEMLKEISTQI 231 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + G +A ++ Y + G+P + ++ I+ +IP ++ + I Sbjct: 232 SNYIRGQISVAFAVMIMFAIGYTIIGLPYGWLIAIVAGILNIIPFLGSFLAMVPAVVVGI 291 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + IE + + + P L+G +K+ + L+ G+LG+ G Sbjct: 292 FVSPVMLISVLVVFMIEQTLEGRIISPKLLGSSMKIHPVTVLIVLLSAGNIFGILGVIFG 351 Query: 332 PVLMALIAVIWKESIMAIKENKE 354 A++ V+ + + + Sbjct: 352 VPGYAILKVLIYRFYNWWQTSSD 374 >gi|304385354|ref|ZP_07367699.1| permease [Pediococcus acidilactici DSM 20284] gi|304328561|gb|EFL95782.1| permease [Pediococcus acidilactici DSM 20284] Length = 376 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 124/342 (36%), Gaps = 18/342 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + K S T+ V+ V + L + + Sbjct: 40 FISTVFMPLILATFLYYMLHPLVKLLMKVHYKKFRISRTWAVVLVFVGFLLLIVWGISSF 99 Query: 82 FYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + ++ +++ + ++A + + +P+ + K P + +E Sbjct: 100 LPSLIDQISQMLGNLPMIAKKLQVAIPQLVDH--------SWLRKVDFDPYLKNLNNE-- 149 Query: 141 LKTNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + F+ + G I + + +I + I LF+ +DG+ + + + Sbjct: 150 IGQYAEQFLANMTNSIGNIIAALTNITVIVITVPIILFYMLKDGYKLIPTISRIVPEHNR 209 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I I G Y + P + LGVI I +IP Sbjct: 210 KSVLNLFYSMSDTLSSYISGQVIECIFVGTFTVIGYMIIHQPYGLVLGVIAGICNIIPYV 269 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P S+ + I + + + I + + P ++G +++ L L+ Sbjct: 270 GPYFGIFPSLLVAIAQSPEQVISVIIVVLIVQQVDGNLIYPNVIGKSLQIHPLTIIILLL 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+LG+ + A++ V+ +++KI Sbjct: 330 VAGKLAGILGMILAVPTYAIVKVLINFIHHIWVLDRDKIEEK 371 >gi|126642639|ref|YP_001085623.1| PerM family permease [Acinetobacter baumannii ATCC 17978] Length = 370 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 125/331 (37%), Gaps = 18/331 (5%) Query: 31 FAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-LFYY 84 P + A + + P+ S F+ + T++V ++VPL++ Y Sbjct: 2 VIPFIGAFFLAYLFSPLVEVLVKIKIPRWLAISIVFIGIGVTLTVALWYLVPLIWKQLVY 61 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + + + W+S ++ +++ +T + Sbjct: 62 ARDSIPAGIHWINAE------LLPWISST---FHVQQMEIDTDQMSKAVMDYVQTNYSAD 112 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + ++ G+ F+ +++ + I F+F D + Q L L + A +I Sbjct: 113 SIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIV 172 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R V+ + G ++ + G+V L G+ + +G++ + ++IP Sbjct: 173 RECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGII 232 Query: 265 VSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + I + L+PFL+G I L + F ++ G + Sbjct: 233 AAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQ 292 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G LG+ I + A+I V+ K + + Sbjct: 293 LAGFLGMLIALPVAAVIVVLLKHLRENYERS 323 >gi|91205420|ref|YP_537775.1| permease PerM-like protein [Rickettsia bellii RML369-C] gi|91068964|gb|ABE04686.1| Permease PerM-like protein [Rickettsia bellii RML369-C] Length = 351 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + I + + P A II + P SK + S+ +++ Sbjct: 1 MNKTAIFWLLFIGIFISGFMLISEAIRPFFIAFIISYLLQPAIEFVASKFKLSNKISSIV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F L L + +V + + ++++ Sbjct: 61 VYLIFLSIFFTALTLLV-------PVIYGQVSTFVNNIPKYKDYFQTEILPPIMTKIYAV 113 Query: 126 HLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++ F+ + + + + +I ++ + + + I LF+F RD Sbjct: 114 EPNIADKIRDSLSNFINSIFTILGSLANNFWHYTLITINIFVLFLLIPIILFYFLRDWTR 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + + SL I + ++ + G I + + ++ + G+ + Sbjct: 174 IIENMKSLLPLKSRHKILGILSSINSLLAAYIRGQLNICLLLSIYYSISFSIIGIDLALL 233 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++T + +IP F ++I L G + + I L P ++ Sbjct: 234 LGILTGFLVIIPFIGTFISCFLTLTIGYLTFGATTQLFYIMVVYIIGNICESYILTPKII 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L L F + G +G+F + + ++ I K ++ Sbjct: 294 GDKIGLHPLWIIFSIFACGSLFGFIGIFFAIPIAGVTKILLFNIIKFYKSSR 345 >gi|229541941|ref|ZP_04431001.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] gi|229326361|gb|EEN92036.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] Length = 341 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 111/355 (31%), Gaps = 25/355 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +G+ R +I +I + LYFL+ +L I + + Sbjct: 7 SLFQKRGVRRVLIFVLITLILYFLRSMMDLMLLTFIFSYLVNRLQKIVTRWFPIKRRLAV 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I + ++ + ++ F + E+ +LV ++ Sbjct: 67 LIVYILILGGLTLGVIKYFPILVNEITQLVMQISDFYTKP-------------------- 106 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +H + + + + + + II FF + Sbjct: 107 -QHNEVLNYIVKNIQEKKIVDYAQKGVSILFDYFTSISKVSIQVFMAIILSLFFLLEKER 165 Query: 184 ISQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + A++ +I IIA+ ++ W+ G P Sbjct: 166 IIRFTKQFKKSKLAAFYDEIEYFGVKFVGTFGKVIEAQFIIAVVNSVLTTIGLWILGFPQ 225 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + +IP G IS + I G + + I + L P Sbjct: 226 LFGLAILVFALGLIPVAGVFISLIPLCIIAYSIGGGMKVLYVLILIVIVHAVEAYVLNPQ 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ +P TF L+ G+ GL +G ++ + + + + + K+ Sbjct: 286 LMSSKTNMPVFYTFLILIFCEHFFGVWGLILGIPIVMFFLDVLEVTGRSTEPKKK 340 >gi|148549257|ref|YP_001269359.1| hypothetical protein Pput_4051 [Pseudomonas putida F1] gi|148513315|gb|ABQ80175.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 354 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 123/342 (35%), Gaps = 14/342 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I V LY L P L +++ + + P+ + V+ +F + Sbjct: 10 ALLIAVLLYSLHNILTPFLVGIMLAYLADPLVDRLERLGLSRTW--------GVVVVFGL 61 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK---HLSHPQSL 133 L L ++ + L ++V + + WL + L Sbjct: 62 FTLLLLALLLVLVPMLAKQLVRLYELAPQMLDWLEHVALPWVQGRLGLADGFWKFDKIKA 121 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + T+ + + A+ + + + +++ + + F+ RD + +L L Sbjct: 122 AIGAHMGQTTDIVGMLLSQATASSLALVGWLANMVLIPVVGFYLLRDWDLMMGKLRGLLP 181 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + L G+ + +G++ + A+ Sbjct: 182 RQREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLAGLAAI 241 Query: 254 IPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P I ++ G+++ + + + L P LVG I L + Sbjct: 242 VPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F ++ G G G+ + + A+I V+ + KE+ Sbjct: 302 AVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHALYKES 343 >gi|326332948|ref|ZP_08199205.1| putative permease [Nocardioidaceae bacterium Broad-1] gi|325949306|gb|EGD41389.1| putative permease [Nocardioidaceae bacterium Broad-1] Length = 400 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 106/305 (34%), Gaps = 16/305 (5%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F+ ++ + + + + V+ + + L ++ ++ + V P W+ Sbjct: 110 FLQRRGFARPWAVLTVILGVLGALALFFVALVPVISDQVAKISANV----------PDWI 159 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 ++ ++ + Q L + E + + A G+ ++ ++ + Sbjct: 160 EEL----QRNQRIQQLNEDYQILDKVQEYVASGDFVSSAFGGALGVGLAVINVLVTAFIV 215 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I+ +F + L K+ V I G I+A+ GL Sbjct: 216 IVLTLYFIAAYDQTKNAIYRLAPASRRDRVSKLGDRVFDGIGGYVSGAFIVALCAGLSTL 275 Query: 231 SAYWLAGV-PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 ++ G+ VAL + I +IP GA I V ++ ++ Sbjct: 276 VLLFVIGMGEYAVALAFVVMITDVIPMIGATIGAVIVCAITFATTDVKTGLIAVVFYIAY 335 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + P ++ + +P + T + G +G++G + A I ++ +E + Sbjct: 336 QQFENYVVYPRVMSRSVDIPGVVTVIAALIGASLLGVVGALLAIPTAAAILMLIREVYVR 395 Query: 349 IKENK 353 ++ + Sbjct: 396 AQDER 400 >gi|311069412|ref|YP_003974335.1| putative permease [Bacillus atrophaeus 1942] gi|310869929|gb|ADP33404.1| putative permease [Bacillus atrophaeus 1942] Length = 371 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 112/346 (32%), Gaps = 16/346 (4%) Query: 12 MRWMIMFII----LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R + +F I + ++Y+ P L ALI+ P T ++ Sbjct: 10 FRTLFVFTISTGSIAAVYYSFPLIYPFLIALILSSAIHPFVEYLDRLTSLPRTLNVILVL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + L L + L + I L + EL Sbjct: 70 AFFLLITVGALTLLVAEIVSGTAYLAKTLPPHLNTFIIFCEKLFTTHIQPFYHELTVLFN 129 Query: 128 SHPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + T ++ G + I + + + IF ++A FF Sbjct: 130 GLETNQQASIVTQIQALGDSAAKNAGLILSHILEMIPKIFALLPNTAAVFIFSLLATFFI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + L S+ A K + + K + + +++ ++ Sbjct: 190 TKDWHKLKALLLSILPERISANGKAVGSELKKAMAGFVKAQAALVFLTMIIVCIGLFILK 249 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + + ++ ++P G F +YL I G + A + + I L I + Sbjct: 250 VEHPATIAFLIGLVDLLPYLGTGSVFVPWILYLSITGQLPLAIGIGILYLIVL-IQRQLT 308 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P L+ I + L T L G + G LGL GP ++ I + Sbjct: 309 EPKLLSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAILVFIQALL 354 >gi|291485147|dbj|BAI86222.1| hypothetical protein BSNT_03979 [Bacillus subtilis subsp. natto BEST195] Length = 279 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 106/284 (37%), Gaps = 7/284 (2%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M ++++ + + + L+ ++ +++ + + + P Sbjct: 1 MVIYVLFFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGL-----LLHVHNHTDDWP 55 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ F LDY L + +F+ +D + + + Sbjct: 56 DGMHHRIDKMIRQTETFFAGTIEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTV 115 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + R V + G ++ + G++ G ++W+ G+P + LG+I+ Sbjct: 116 WYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLIS 175 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P ++ + + ++ + + I F+ L PF+VG +K+ Sbjct: 176 GVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGRSLKMH 235 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L+ G G++G+ + A++ V+ + E+ Sbjct: 236 PVVIMLALLAGGELAGIVGMILAVPATAVLKVMMIHFLRMRTEH 279 >gi|126699868|ref|YP_001088765.1| hypothetical protein CD2250 [Clostridium difficile 630] gi|254975843|ref|ZP_05272315.1| hypothetical protein CdifQC_11049 [Clostridium difficile QCD-66c26] gi|255093230|ref|ZP_05322708.1| hypothetical protein CdifC_11329 [Clostridium difficile CIP 107932] gi|255101394|ref|ZP_05330371.1| hypothetical protein CdifQCD-6_11344 [Clostridium difficile QCD-63q42] gi|255307268|ref|ZP_05351439.1| hypothetical protein CdifA_11807 [Clostridium difficile ATCC 43255] gi|255314972|ref|ZP_05356555.1| hypothetical protein CdifQCD-7_11507 [Clostridium difficile QCD-76w55] gi|255517647|ref|ZP_05385323.1| hypothetical protein CdifQCD-_11096 [Clostridium difficile QCD-97b34] gi|260683843|ref|YP_003215128.1| hypothetical protein CD196_2107 [Clostridium difficile CD196] gi|260687503|ref|YP_003218637.1| hypothetical protein CDR20291_2150 [Clostridium difficile R20291] gi|115251305|emb|CAJ69136.1| putative membrane protein [Clostridium difficile] gi|260210006|emb|CBA64041.1| putative membrane protein [Clostridium difficile CD196] gi|260213520|emb|CBE05245.1| putative membrane protein [Clostridium difficile R20291] Length = 364 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 109/326 (33%), Gaps = 2/326 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P + A ++ + P+ SK + ++ ++ + I +LF Sbjct: 36 LLMSLLTPFIIAFVLAYIFNPLVKFLESKLNFKRIYSLLLTYGVLIVILISFILFTVPSI 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + +LV+++ L + + L + S + + G Sbjct: 96 VNSLADLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTLKEYGDKIMSVMPKFSNLLIGSLG 155 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I G + + L I L + + + + + ++ + Sbjct: 156 G--IFSTTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDFIIELCQ 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I F G + + G++ G + + G + +M M+P P+ A Sbjct: 214 SLNLNIGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTLMGVMNMVPYFGPVIGMAP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + N A ++ I + + P +VGG + L T + G G+ Sbjct: 274 VVIINLFSNPTIALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVGGGFFGI 333 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 G+ + +M +I + + E + + Sbjct: 334 PGMILSAPVMGVIKIYFCEFVNRRHD 359 >gi|315103029|gb|EFT75005.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] Length = 386 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFALVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ S + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPSHD 379 >gi|258544125|ref|ZP_05704359.1| GNAT family acetyltransferase [Cardiobacterium hominis ATCC 15826] gi|258520633|gb|EEV89492.1| GNAT family acetyltransferase [Cardiobacterium hominis ATCC 15826] Length = 375 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 101/317 (31%), Gaps = 7/317 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P A ++ + P+ + +T + + + ++ L+ + G Sbjct: 24 APVLTPFFLATLLAYLGDPLVDRLQRWRLSRTTAVVTVFCGIFLFFALIVLVVIPAIGGQ 83 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + + L+ + ++ + S T LK Sbjct: 84 IDRVVGKLPNYGQWLQQSALPRLAALFDITPGEFRIDDIIAAIKDNLGSSATLLKNVLAK 143 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + ++ + + F+ RD ++ + L + R Sbjct: 144 VTGS-----ANWIISFVSYLVLVPVITFYMLRDWDAMVAKTAELVPRKAIGTVTLLVRRS 198 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAV 265 +V+ G ++ G GL+ G+ +A+G+ +++ +P I A Sbjct: 199 DEVLGGFLRGQLLVMSGLGLIYAIGLTALGLDMAIAIGIFAGLVSFVPYLGLIVGMALAG 258 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + LL ++ + + I I L P VG I L + F ++ G + G Sbjct: 259 GMALLQFQDVSHLVGVVAVFCIAQAIEGMVLTPKFVGDRIGLHPVAVLFAVLAGGQLFGF 318 Query: 326 LGLFIGPVLMALIAVIW 342 +G+ + A+I V Sbjct: 319 MGVLLALPAAAVINVFL 335 >gi|323357214|ref|YP_004223610.1| permease [Microbacterium testaceum StLB037] gi|323273585|dbj|BAJ73730.1| predicted permease [Microbacterium testaceum StLB037] Length = 392 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 118/338 (34%), Gaps = 16/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q I+ +++ ++ + + P++ ALI P+ K +A + T+ Sbjct: 42 QIIVVVLLLAGLIWGIQQVTLVIIPLVLALIFASAFGPVTMWLRRK--GVPAVIATLLTL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L +L ++ + +S A Q W +P + + Sbjct: 100 LAVVVVLAGLGWLVVNSVINRWDYLS--SQAVQGFQKAQDWYHTLPFAVPQEQ------- 150 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E A+ + + M++ LFFF +DG + + + Sbjct: 151 ----VNEAIEGIKTFVTSAQFGTAAATSVGAIASFVTGFVLMVVILFFFLKDGPRMWEFV 206 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++I V+ S G +A + + + + VP + L V+ Sbjct: 207 LRPFHGSHYDRARRIGDKTVTVLGSYMRGTASVAAVDAIGIYIGLLILQVPLALPLAVLV 266 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A IP GA + ++ L+ A + + + L+P L+G +KL Sbjct: 267 FLLAFIPIVGAVTAGILAALVALVTNGPIVALIVVGVVVLVNQLEGNFLQPVLMGRTMKL 326 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L GG G+LG + L A++ I Sbjct: 327 HSFVVLVVLAGGTAIGGILGTLLAVPLTAVVWGIITVW 364 >gi|307544883|ref|YP_003897362.1| hypothetical protein HELO_2293 [Halomonas elongata DSM 2581] gi|307216907|emb|CBV42177.1| conserved hypothetical protein [Halomonas elongata DSM 2581] Length = 359 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 122/338 (36%), Gaps = 16/338 (4%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 W+ + + L+FL + P ++++ + P+ K ++++ + Sbjct: 6 WIAAVLAALGLWFLISIEPVLMPFFVSMVLAYLGDPLADRLEDKGLSRRLSVSLVFLLL- 64 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L + +L + L ++ + + W+ S + Sbjct: 65 -------TLVIVLSLLLVIPILGRQIGQLIESLPAILGWVQSTVVPRIQSMTGMDLSTDF 117 Query: 131 QSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ K G + S+ G+ + ++ + + F+ D + ++ Sbjct: 118 DQMRETLVDNWKETGTFAATLLAQVSKSGLALVALVGNLALIPVVTFYLLLDWDDLVAKV 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +++ +V+ + G I+ + G++ L GV + +G+++ Sbjct: 178 RGSLPRRWEPTVVRLAGECDEVLSAFLRGQLIVMLCLGIIYAIGLTLLGVKFGLLIGLLS 237 Query: 249 AIMAMIPGGAPISFTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +++P I +VS + G I+ + FI L+P L+G I Sbjct: 238 GLASIVPYLGVIVGISVSGLVAFFQSGGEIWMLLGVAAVFGFGQFIESIVLQPKLLGDKI 297 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + F ++ G + G G+ + + A++ V+ + Sbjct: 298 GLHPVAVIFAVLAGGQLFGFTGVLVALPVAAMVMVVLR 335 >gi|157371749|ref|YP_001479738.1| hypothetical protein Spro_3512 [Serratia proteamaculans 568] gi|157323513|gb|ABV42610.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 356 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 120/357 (33%), Gaps = 16/357 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ + LYFL G P+L A+++ + WP + + S Sbjct: 10 RRRFTDPQAIALLVILVAGFLILYFLHGILTPLLVAIVLAYLLEWPTAR--LQRIGCSRN 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 + A + + + ++ + + + L++ + + NQ P + A Sbjct: 68 WAASMVMIMFAGIAMLLVFVVAPTAWQQGINLMTDLPGMLNQFYNFAATLPKRYPALVDA 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L + E+ +K + + L + +I + + +FF + Sbjct: 128 GIIDMMAENLRGRLSGMGESVVKFSLASLV---------GLLTLAIYLILVPMMMFFLLK 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + + + I + G + + G+ + + + Sbjct: 179 DKEQMLNAVRRVLPRNRGLAGQVWIE-MNQQITNYIRGKVLEMVIVGVATYLVFVVLDMR 237 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V+ +IP + T + + G + L + + + L Sbjct: 238 YSLLLAVLVGFSVLIPYIGAVLVTIPVVVVAMFQWGVGADFWTLIVAYLVVQGLDGNLLV 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + ++ E Sbjct: 298 PILFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDELRVETE 354 >gi|309803069|ref|ZP_07697168.1| putative membrane protein [Lactobacillus iners LactinV 11V1-d] gi|312872535|ref|ZP_07732603.1| putative membrane protein [Lactobacillus iners LEAF 2062A-h1] gi|312874917|ref|ZP_07734936.1| putative membrane protein [Lactobacillus iners LEAF 2053A-b] gi|308164850|gb|EFO67098.1| putative membrane protein [Lactobacillus iners LactinV 11V1-d] gi|311089662|gb|EFQ48087.1| putative membrane protein [Lactobacillus iners LEAF 2053A-b] gi|311091897|gb|EFQ50273.1| putative membrane protein [Lactobacillus iners LEAF 2062A-h1] Length = 380 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 120/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFIVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIINTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ LFF +DG I+ L S Sbjct: 163 NT----GKASFNLFLENLFGAVNVISMLIVTLLTAPFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDMNIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|254513811|ref|ZP_05125872.1| permease [gamma proteobacterium NOR5-3] gi|219676054|gb|EED32419.1| permease [gamma proteobacterium NOR5-3] Length = 379 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 109/324 (33%), Gaps = 17/324 (5%) Query: 11 IMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I RW ++F + Y L+ P + ++G+ P+ + S TF ++ Sbjct: 16 INRWPLVFAVFAGMGLLFYLLQPILLPFVLGALMGYLGDPLVDRVEER-GGSRTFGVILV 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L ++ + F + ++ LV ++ L V WL D+ S Sbjct: 75 FLFFTTLSLLAMFFAVPVLLQQLDGLVGRIPL-------VYAWLRDVAVPWLQSRTLVTG 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGFS 183 PQ + S L L +I + + F+ RD Sbjct: 128 ARLPQIDWSAELLQNWQSLGKVTATTVSSLTGSGLGLLLGLANIALVPVVAFYLMRDWDD 187 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I+ ++ L + A ++ +V+ + G I+ G + W G+ + Sbjct: 188 IAGRILHLMPKAWQAGTLQMVSEADEVVGAFIRGQFIVMCALGALYAVGLWFVGLQLALL 247 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG I + +++P I + S+ + + I L P LV Sbjct: 248 LGFIAGLASIVPYLGFIVGISASLAAAWLQFHEPLPLLYVAAVFGVGQLIESMVLTPVLV 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGL 325 G I L + F L+ G + G Sbjct: 308 GNRIGLHPVVVIFALMAGGQLAGF 331 >gi|210633874|ref|ZP_03297889.1| hypothetical protein COLSTE_01806 [Collinsella stercoris DSM 13279] gi|210159043|gb|EEA90014.1| hypothetical protein COLSTE_01806 [Collinsella stercoris DSM 13279] Length = 455 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 111/308 (36%), Gaps = 14/308 (4%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVM-----CLFIVPLLFL-FYYGMLEMKELVS 94 F + PI + F + V V ++ ++P++ + + ++ Sbjct: 53 AFVASPIVNWFERHRVPRGAGALVGLVVVIVGLVLLFALVIPMVTAQLIDLLRDAPSKLA 112 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + + + ++T ++ + + AS Sbjct: 113 ALGAWVVRMENEYAVIEHLNDVVQLDSIFTAAQDITNQALSGLLAAVRDGIVPMVNNIAS 172 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 ++FL + L+ F+ D I+ ++ + H ++ + +V + + Sbjct: 173 TVFIVFLGFVLA--------FWLACDYPRINDEICRILPHDKADDYRLMVAVVSRSVGGY 224 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 I ++ +G + + + G P A+GV++ ++ +IP P ++ + + + Sbjct: 225 LRSTVINSVIQGFLAFVGFAIVGHPYAAAMGVLSGVLNIIPVVGPSISAIIATLIALVYS 284 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 A + + I D + P + +++ + + LV G G +G+ + L Sbjct: 285 PMMAVWTMIMAMLSQNITDNVIAPKINQSTMQVHPVLSLTALVVGSTFGGAVGMIVALPL 344 Query: 335 MALIAVIW 342 +A+I ++ Sbjct: 345 VAVIKSLF 352 >gi|228992073|ref|ZP_04152009.1| hypothetical protein bpmyx0001_28180 [Bacillus pseudomycoides DSM 12442] gi|228767802|gb|EEM16429.1| hypothetical protein bpmyx0001_28180 [Bacillus pseudomycoides DSM 12442] Length = 376 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + +K S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLERKGVSRIISIASIYILVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G L+ + Sbjct: 103 FLVVTVIPIIKDQVNALIDNLPYFGHEVERAARRF----GESNIIGKIQDSLNIDVGSIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T TN + + + F + L+ + + LF+ +DG + + Sbjct: 159 KDSTINFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPRYFLRFIPEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K I + I S G I+++ G++L Y + G+ V L V+ I+ ++P Sbjct: 219 RRSSAKLILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAVLAMIVNVVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + I K + P ++G + + + F Sbjct: 279 YVGPIIAILPALIIAFIDSPAMILKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGVILAIPGYAILKVL 364 >gi|323484140|ref|ZP_08089510.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323693215|ref|ZP_08107433.1| hypothetical protein HMPREF9475_02296 [Clostridium symbiosum WAL-14673] gi|323402582|gb|EGA94910.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323502698|gb|EGB18542.1| hypothetical protein HMPREF9475_02296 [Clostridium symbiosum WAL-14673] Length = 374 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 112/320 (35%), Gaps = 4/320 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L GFF P + II + P+ + +++ V V+ L I L + Sbjct: 31 LLGFFMPFVIGWIIALIANPLVKFLERHLKLVRRHGSMVIIVGVLILVIGLLYLAVVWTY 90 Query: 87 LEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 EM V + L + + + + + K L + L + Sbjct: 91 TEMAGFVKDLPLLYDNALSEITEAIENSRKLVTYLPDSLQKPLLEISDNLGGTIGALFSK 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A + ++ + MI+A + F + I + L ++ Y + Sbjct: 151 AAAPTVEIAGNVAKGIPNVMVNTVIMILASYLFLVERDKILRGLKAVLPPFVFRYVDYLK 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + +I FL I +L + + GV + L V+ A++ +P G Sbjct: 211 KDARGLIGGYFLAQFRIMFVVAAILAAGLMILGVKYSLVLAVLIAVLDFLPIFGTGTVLL 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ L A L L I +V + ++P +VG + LP L T F L G + Sbjct: 271 PWAVVKLFSAEYPYAAGLILIY-ITTQVVRQIIQPKIVGDSMGLPPLITLFLLYMGYKVK 329 Query: 324 GLLGLFIGPVLMALIAVIWK 343 G+ G+ + + + +K Sbjct: 330 GIAGMILAVPIGLIFINFYK 349 >gi|319647524|ref|ZP_08001744.1| hypothetical protein HMPREF1012_02783 [Bacillus sp. BT1B_CT2] gi|317390372|gb|EFV71179.1| hypothetical protein HMPREF1012_02783 [Bacillus sp. BT1B_CT2] Length = 353 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 121/342 (35%), Gaps = 5/342 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + ++ PV+ ++ + PI F+ +K + ++ + ++ L + Sbjct: 14 FIFTPFIVLVETIALPVVLTGVVYYLLNPIVD-FLERKNVKRIYSILLLYIVIIGLITIS 72 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + ++ LV V + + G + +++ + L Sbjct: 73 IVSVIPLLREQITSLVDNFPRYVHI---VEDQIKQLIGSQFFNQVQQTMNINLTDLASKL 129 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + G + + +SI+ + LF+ +DG + + L Sbjct: 130 SDQATTILNSTFTGVGTFIGAVT-EVVISIVTVPFILFYLLKDGKKLPLFILKLIPVRLR 188 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L ++ A +++P Sbjct: 189 EQTYVMMSEMNHRLSSYIRGQIIVSFCIGCLLFIGYMIIGLDYASLLALVAACTSIVPYL 248 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + F L + + K + P ++G + + + F L+ Sbjct: 249 GPTIAITPAIIIALVTSPFMLVKLIIVWTVVQLFEGKFISPQIMGKNLHIHPVTIIFVLL 308 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G++G+ + A+I V+ K+ N Sbjct: 309 TAAKLFGVIGVILAIPGYAVIKVVVTHLFEWFKQRSHLYEKN 350 >gi|23097847|ref|NP_691313.1| hypothetical protein OB0392 [Oceanobacillus iheyensis HTE831] gi|22776071|dbj|BAC12348.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 383 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 121/329 (36%), Gaps = 11/329 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + +K P++ A + + PI + KK + S+ L++ Sbjct: 40 ISFVFTPFVVLIKTVILPLILAAVAFYLLNPIVNYLEKKKIKR--------IYSIFGLYV 91 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + + L +++ ++ P + D+ + S++ + Sbjct: 92 IIIGILTVIIVSVIPVLREQIMSLIENLPPFISDIEDMVEDLIGSQVLNQSQILSNLNIS 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + +D + S G + + L+I+ + LF+ +DG + Sbjct: 152 SFVEQISNKLLDLVDTAFSNIGGVIGTVTEIVLAIVTLPFILFYLLKDGDKLPGYFLKFL 211 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F + + + I + G I+A G+++ + + + L +I A Sbjct: 212 PVSFRDQTYTVLKEMNNQISAYIRGQIIVAFCIGVLMYIGFMIIQLDYAPVLALIAAFTT 271 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P P ++ + I + F L I + K + P ++G +++ + Sbjct: 272 VVPYIGPAIAITPALIVAIVTSPFMLIKLIAVWTIVQLVEGKFISPQIMGRNLRVHPITI 331 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F ++ G++G+ + A++ VI Sbjct: 332 IFIILTAGNLFGVVGILLAIPGYAILKVI 360 >gi|315093474|gb|EFT65450.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] Length = 386 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ S + Sbjct: 351 AIPIVAFGVAFIKALNPEPPANEVPPSHD 379 >gi|309390041|gb|ADO77921.1| protein of unknown function UPF0118 [Halanaerobium praevalens DSM 2228] Length = 355 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 114/301 (37%), Gaps = 4/301 (1%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + P+ F+ ++ + +I+ + ++ + + F + KEL + + Sbjct: 52 YLMRPL-VRFLEPIVKNKSLSIIISFLVIVAILTIVFYFGGSIIYNQGKELSQNLSGSYS 110 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + ++ +I + ++ ++L Sbjct: 111 ---YLYNYILEIIESIKQYIDLDNSFLEELQIQEKLFSYLNNLAQKISNYNYMGIFSSIT 167 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 ++ L I+ + LF+ +D + + + +++++ + +++ + ++ Sbjct: 168 NFGLIILLIPFILFYLLKDDQKLFNNILHIIPENKKEEFEEVASEIDQLLSTFISSQVVV 227 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A GLV+ + + +P+ L I I ++IP P + +I++ ++F + Sbjct: 228 AFFLGLVMFFGFLIIQLPNAAVLAFIAMITSLIPIIGPFFGSLPAIFVAATNSLFLFIGV 287 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L I ++ +RP + G +++ L F ++ GV G +G L ++ ++ Sbjct: 288 ALIILIAQYLEGNLIRPLVQGRRLEIHPLVVLFVVLSGVYLFGFIGALTSVPLYVVLRLL 347 Query: 342 W 342 + Sbjct: 348 F 348 >gi|310829602|ref|YP_003961959.1| hypothetical protein ELI_4054 [Eubacterium limosum KIST612] gi|308741336|gb|ADO38996.1| hypothetical protein ELI_4054 [Eubacterium limosum KIST612] Length = 415 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 113/355 (31%), Gaps = 29/355 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK----------KEESSTFLAV------------IATV 68 P++ ++ + + K K + LAV + Sbjct: 51 LLPIIMGAVLAYFLFRPMRWIEKKAFKYIKGSEKKPKLVRLLAVLVIYVITIIVVILFMY 110 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I ++ L E+ + ++ +Q G + I + + + + Sbjct: 111 ISIPAIIDSVVGLVSSIPTYAAEINTFLINLSQRGGFFKDLVDMIQLDLSSVQNLNAKDT 170 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + I A F + + + + + F+ D +I QL Sbjct: 171 MDFIFGNMN---FNSESVKQIGNIAVGFAKGTTSFLIGFVAVFFSGFYLMLDKENIESQL 227 Query: 189 DSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + R + V F G + + GL+ + V + Sbjct: 228 KRLNRAIMSPKANNGFNWAIRTIDGVFYKYFSGKIMTSALIGLICYIGLLVLRVEYAPLI 287 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + +IP PI I+L + + A + +W L P ++G Sbjct: 288 ALVVGVTNVIPYFGPIIGAIPGIFLTLLYSPAKALGVAIWILAVQQFDGNVLGPNVLGKI 347 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++L F ++ G G LG+F+ A+I V E+++ + K + Sbjct: 348 VELNPFWVLFCVMVGGSLFGPLGMFVAIPFFAVIKVFVTEALVRWERRKTTVQEE 402 >gi|138896128|ref|YP_001126581.1| hypothetical protein GTNG_2491 [Geobacillus thermodenitrificans NG80-2] gi|196250080|ref|ZP_03148774.1| protein of unknown function UPF0118 [Geobacillus sp. G11MC16] gi|134267641|gb|ABO67836.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] gi|196210264|gb|EDY05029.1| protein of unknown function UPF0118 [Geobacillus sp. G11MC16] Length = 353 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 101/322 (31%), Gaps = 15/322 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P L A I + P+ SK + + +I + + Y Sbjct: 38 FVTTVLTPFLLAAFITYLLHPLVEYIHSKGVPRALAILLIYLLF--------FGSVGYGL 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT-- 143 + L++++ ++ + WA + + + P + E Sbjct: 90 YRGIPVLIAQLRELDERLPSLMNTYRQ-----WARHIHDETSTWPMEVHTRIEAMFVQLE 144 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + A F+ + + +F+ +D + + + + + Sbjct: 145 QVVARAVTMAINAVKSFIGSAAMFLLIPFIVFYMLKDIDVLKKAVWYMTPKRWRGPGIAF 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + V + + G + GL WLAG+ + LG + + +IP P+ Sbjct: 205 LKDVDESLGGYIRGQLFVCAAIGLAASLGLWLAGMDYPLLLGFVIGLTNIIPYFGPLIGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + L ++ + F+ L P +VG + + L F L G Sbjct: 265 IPAAILAATISLKMVIIVLALIFALQFLEGNVLSPLIVGKSVHMHPLVIMFALFAGGELA 324 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 G+ GL + A++ V Sbjct: 325 GVPGLILAVPTAAVLKVALVHW 346 >gi|290957836|ref|YP_003489018.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260647362|emb|CBG70467.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 452 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 108/308 (35%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V +AL++ P + + V Sbjct: 118 LLVLAGTVWVLMRIISSVQLLVLSFTTALLVTALLQPTVARLTRHGVPR-GLATALTAVL 176 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + +L ++V + RWL D P + +++ + Sbjct: 177 GFVVMGLIGWFVTWQVMENVDDLSNQVQDGIDE---LQRWLLDSPFHVTENQINDIAKNL 233 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ ++T + ++ I+ + + F DG I Q + Sbjct: 234 REAISDNTDTITSAGLEGV---------TVLVEALTGILLTMFSTLFLLYDGKRIWQWML 284 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G I+A+ + + +G + VP V L V Sbjct: 285 KLVPSAARPGVADAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFIF 344 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ +F A + I L+PF++G +++ Sbjct: 345 LFAFIPLVGAVVSGALAVVVALVTQGVFTAVMTLVVVLAVQQIEGHILQPFILGRAVRVH 404 Query: 309 FLPTFFGL 316 L + Sbjct: 405 PLAVVLAV 412 >gi|300781580|ref|ZP_07091434.1| possible permease [Corynebacterium genitalium ATCC 33030] gi|300533287|gb|EFK54348.1| possible permease [Corynebacterium genitalium ATCC 33030] Length = 540 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 29/310 (9%) Query: 12 MRWMIMFIILVSL-YFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R + +FI++ +L Y + F P++ ALI+ P+ +SF+ K A+++ Sbjct: 79 LRMVAIFILIGALAYLVGKFWAGILPIVLALIVCTVLEPV-TSFLRKHGLPGALSALMSM 137 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + + + + L + Q + Sbjct: 138 LLALAVLVFFVSMILPDIITNSRVLAIQAGQGLQS----------------LALWLQNQD 181 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR-------D 180 S P S+ + + I ++ A + M+I D Sbjct: 182 SLPFSVDAEQINEVVQDSITWVQNRAGAIAGGIFSGISTATSMMITFVVVVVLTFFFLND 241 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + S + ++ + + +++ + + +G W GVP Sbjct: 242 GPKFLPWVRSATGGRAGLHATELLTRIWNTLCGYIRAQAVVSFIDAVCIGVGLWAVGVPM 301 Query: 241 HVALGVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L VIT + IP I A++ I L+ A + + L P Sbjct: 302 AFTLAVITFMAGFIPLVGAIVAGALAVIIALVSLGFTEALIVLGIVIAVQQLEGNVLSPL 361 Query: 300 LVGGPIKLPF 309 L + L Sbjct: 362 LQSRAMNLHP 371 >gi|229087153|ref|ZP_04219302.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-44] gi|228696125|gb|EEL48961.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-44] Length = 364 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 128/349 (36%), Gaps = 12/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + I +L ++ G P + AL + P+ + K + +++ + Sbjct: 3 RLIFVILATIIGFYALLYVSGLIYPFIIALAFAYLINPVVNFLNQKLQFPRALAVLVSLI 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L ++ Sbjct: 63 LVFGAIVGLVTYLVTEAISATTYLLQIVTEKFPTIVQYAQQFALNHIMPLYDDLISQFNH 122 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +S + ++ G + I + F ++F+++A FF Sbjct: 123 LGESQQYTITQNIQNLGTEATKQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 183 FDWHKLANKMKQLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 242 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + + +IT I+ ++P G F IY+ G+ A L + + + + + + Sbjct: 243 PYAITIAIITGIVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVI-VQRQIME 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P ++ I L LPT L G + G LGL IGPV + L+ + K + Sbjct: 302 PKVLSSNIGLDPLPTLIALFVGFKLYGFLGLIIGPVTLVLLNTLHKARV 350 >gi|109898796|ref|YP_662051.1| hypothetical protein Patl_2481 [Pseudoalteromonas atlantica T6c] gi|109701077|gb|ABG40997.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 356 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 119/353 (33%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P +M +++ + V L L PVL A +I + WP+ +S+ F + Sbjct: 15 DPDSVMLLIMLIAVSVLLALLGTILMPVLVAAVIAYLLDWPVSQ--LSRSGMRRGFACSV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L I+ + + + L+ ++ H WL +P Sbjct: 73 VIFGFLTLCILTFIGIVPVVSQQSINLIREMPQIWGHAQV---WLLQLPE----QYPDFV 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL Q + + + G + S + ++ + + +FF +D + Sbjct: 126 HLGDVQDMLDGVNERIVSLGEQLLSASVSSL-GSLASLLIYLVLVPLMVFFMLKDKDQLL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L K++ + I + G I I G + + L + + LG Sbjct: 185 DNLSPLLPS-QRRLIKQVGSEMNTQIANYIRGKVIEIIIVGTISAVTFALMDLRYALLLG 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA + V++ L + I L + + + L P L Sbjct: 244 VLVGFSVLIPYIGAAVVTIPVAVVALFQWGITPDFWWLMIAYGVIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ + ++E I Sbjct: 304 AVSLHPVYIIIAVLFFGGLWGFWGVFFAIPLATLVKAVINAWKGPLQELPPAI 356 >gi|328949569|ref|YP_004366904.1| protein of unknown function UPF0118 [Marinithermus hydrothermalis DSM 14884] gi|328449893|gb|AEB10794.1| protein of unknown function UPF0118 [Marinithermus hydrothermalis DSM 14884] Length = 371 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 108/346 (31%), Gaps = 8/346 (2%) Query: 13 RWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL--AVIA 66 R + + + +LY L + + + A ++ + + P+ + + A Sbjct: 21 RVLAALLGVWALYQLLARAQSVWTAFVVAYVLAYLANPLVCWLERFRVRRVLGVVVAYAL 80 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V + + ++L + V Q +P ++ + Sbjct: 81 LFLFLGFASVLVAEVVGQLSRFARDLPALVAPLVQWVEGLPDRITRFEVPPELERVLQGA 140 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRF--GMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + Q+L L + S + + + + + D I Sbjct: 141 SASLQALLEGFANTLLEWLRTLLGTGGSLIQGLAGIVGGLFQLFIVFVLTAYMLLDFPRI 200 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q L + + + ++ + + G +IA G V+G + GVP AL Sbjct: 201 GQSLIQVFPRPYQPLIQDLAAKLDHAVGGYVRGQLLIAALVGTVVGLGLFFLGVPLAAAL 260 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G I + ++P I ++ L + + + + P ++ Sbjct: 261 GFIAGVFNLVPYLGVIVSIIPALLLALPQGGVAVVGTLVVFILANQLEAHLFSPLILSRA 320 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + ++ G GL G + A + VI+ E + + Sbjct: 321 TQLHPVTVILAILAGATLFGLWGAVLAVPFAAFLKVIFSEYYLNSR 366 >gi|325287490|ref|YP_004263280.1| hypothetical protein Celly_2592 [Cellulophaga lytica DSM 7489] gi|324322944|gb|ADY30409.1| protein of unknown function UPF0118 [Cellulophaga lytica DSM 7489] Length = 362 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 119/343 (34%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ LY + + A + PI K + ++T +I ++ + Sbjct: 20 IVLLCFFLYKISSVLVYISIAAVASLIGRPIVLFLRDKLKFNNTLAVIITMFFLIGIVGG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + L + + + +I + + + Sbjct: 80 IIALFIPLIIQQGHNLA---------LLDINQLQGNIENLYTEVINYFGVSTTELEENVK 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S FL FIP F + + + + ++ FFF +D S L L Sbjct: 131 SSNFLTNVDFAFIPNFLNSLVGVLGSLSIGLFSVLFITFFFLKDRKLFSDGLLMLTPQNK 190 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +KK + ++ F+G+ + ++ + G+ + + + + A++ +IP Sbjct: 191 EGRFKKSMDTISSLLSRYFVGLVFQILILFVIYTIVLLVVGIENAIVIAFLCALLNLIPY 250 Query: 257 GAPISFTAVSIYLLIKGNIFNA--------TCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 PI A+ + L + N+ + T + G I +VD +PF+ +K Sbjct: 251 VGPIIGGALMVTLTMSSNLGESFSEVILPKTGYVMIGFIIGQLVDNFFSQPFIFSNSVKS 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G G+ G+ I I VI KE K Sbjct: 311 HPLEIFLVIIIGGLLFGITGMIIAVPGYTAIKVILKEFFADNK 353 >gi|78223257|ref|YP_385004.1| hypothetical protein Gmet_2050 [Geobacter metallireducens GS-15] gi|78194512|gb|ABB32279.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 368 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 117/336 (34%), Gaps = 4/336 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ +++ L + L F PVL ALI+ + P+ S K+ + ++ T V Sbjct: 21 IIVGVLVLAGLFFAWSLSSIFLPVLLALILAYVLNPVVSWLEGKRVPRVVVILLVMTGIV 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F ++ AN+ +P + +L+ + Sbjct: 81 VGFAGAFAFFAGSIQNELAAVQINLPDYANRFYGLIPEKVKVYLQIETPDKLYRQVDRML 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ +S + F+S G I + + L++F D + Sbjct: 141 NELRGISFDIARGAYDFVKKAFSSTLGFILT--VVGYFITPVYLYYFLADLPHFKEGALK 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + V+ + G + + ++ L G+ +A+G ++ I Sbjct: 199 LVPERSRETVTGLGDEIDGVLSAFVRGQLSVCVILAVLYSIGLSLIGIDLAIAIGTLSGI 258 Query: 251 MAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP I ++ + L ++ + W I I + P +VG + L Sbjct: 259 LFIIPYVGTIFGIVVSMIMAFLKFHDLLHPLLCLGWFVIVQAIEGALITPAIVGNRVGLH 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L G + G+ G+ + + A++ V + Sbjct: 319 PVVAIIALFIGGQWFGIFGMLLAVPVAAVLKVFLRH 354 >gi|253989272|ref|YP_003040628.1| permease perm [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780722|emb|CAQ83884.1| putative permease perm [Photorhabdus asymbiotica] Length = 359 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 128/358 (35%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I ++I+ + +YFL G AP+L A+++ + WP +S + K S T Sbjct: 10 RRRFTDPQVIALFIILVVGFCIIYFLHGILAPLLVAIVLAYLLEWP--TSMLEKLGCSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + + +L + + L+S + P L+ Sbjct: 68 VAVCIVLIIFSGISALVILIVAPTAWQQGLNLLSDI----------PNMLNRFNEYAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + +F+ + L + +I + + FF Sbjct: 118 PTRYPVLVDAGIIDMMAENLRSKISTAGESVVKFSVASLIGLLTLAIYLILVPLMAFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + Q L + ++ R + + I + G + G+ + + G+ Sbjct: 178 KDKNQMLQALQRVLPR-NRILAGQVWREMNQQITNYIRGKVTEMVIVGICTYAVFAFLGL 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ + +IP GA I V + L + + L + I + L Sbjct: 237 EYSLLLSVLVGLSVLIPYVGALIVTIPVILVALFQWGVGTDFWTLIIAYLIVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L LI + + ++ Sbjct: 297 VPILFSEAVNLHPLVIILSVITFGGLWGFWGIFFAIPLATLIKAVIHAWPEEMVITED 354 >gi|291288291|ref|YP_003505107.1| hypothetical protein Dacet_2389 [Denitrovibrio acetiphilus DSM 12809] gi|290885451|gb|ADD69151.1| protein of unknown function UPF0118 [Denitrovibrio acetiphilus DSM 12809] Length = 342 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 124/335 (37%), Gaps = 15/335 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++L+ +Y ++ + + I + P + K + + +I V + + + Sbjct: 19 VALVLLLMYRIQSIISIFAVSFFIAYLLDPAIDKLETWKIPRAAGI-LIFMVLLTIILVC 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L++ Y E+ L + V P ++ + + +K Sbjct: 78 AMLYVVPYLYYEINYLANMV----------PDIVNSVTNTAQNFAERMNIYVSLEGIKNQ 127 Query: 137 SETFLKTNGIDFIPRFASRF--GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + ++I + I +F+F +D I+ ++ Sbjct: 128 LAPKAGAIAKQTLAAALGILSSASTAVSSIVNIAIIPILVFYFLKDFDRINTKIFDALNR 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K+ K++ + F G I+A G++ + G+ V +G+++ +++++ Sbjct: 188 KYDNDIKRYITEFDKILSAYFRGQLIVAAILGVLYTIILLVVGIKPAVLIGIVSGVLSVV 247 Query: 255 PGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P I A S+ L +I + +F+ A+ I + P +VG + L Sbjct: 248 PYLGFIIGFAASLILAFVQFQDILHPLMVFIGFAVVQAIEGNLITPKIVGESLGLHPTAV 307 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 F L+ G G+ G+ I + A I ++ E Sbjct: 308 IFALLAGGSLFGIGGMIIALPVAAFIKILLSEQFA 342 >gi|229005620|ref|ZP_04163325.1| hypothetical protein bmyco0002_25530 [Bacillus mycoides Rock1-4] gi|228755652|gb|EEM04992.1| hypothetical protein bmyco0002_25530 [Bacillus mycoides Rock1-4] Length = 376 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + +K S + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLERKGVSRIISIASIYILVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G L+ + Sbjct: 103 FLVVTVIPIIKDQVNALIDNLPYFGHEVERAARRF----GESNIIGKIQDSLNIDVGSIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T TN + + + F + L+ + + LF+ +DG + + Sbjct: 159 KDSTINFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPRYFLRFIPEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K I + I S G I+++ G++L Y + G+ V L V+ I+ ++P Sbjct: 219 RRSSAKLILNDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAVLAMIVNVVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + I K + P ++G + + + F Sbjct: 279 YVGPIIAILPALIIAFIDSPAMILKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGVILAIPGYAILKVL 364 >gi|314922878|gb|EFS86709.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314980835|gb|EFT24929.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090278|gb|EFT62254.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|327327089|gb|EGE68870.1| membrane spanning protein [Propionibacterium acnes HL103PA1] Length = 386 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ S + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPSHD 379 >gi|270284414|ref|ZP_05966064.2| putative membrane protein [Bifidobacterium gallicum DSM 20093] gi|270276818|gb|EFA22672.1| putative membrane protein [Bifidobacterium gallicum DSM 20093] Length = 607 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 113/359 (31%), Gaps = 23/359 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSL-------YFLKGFFAP-VLSALIIGFTSWPIYSSFIS 53 + P + R ++ +I V + +F + ++ AL + P+ I Sbjct: 77 NDPRRPPLWLSRALMYAVIAVFVGYFCYRTWFKISYIVLDIVIALFLSLAVEPLVLRLIR 136 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 AV V ++ + + + + + ++ + + Sbjct: 137 H-GWRRGVAAVTCLVGLLLIIVGLMAAFGNLFVQQFISMMKGLPAVYDDLVTT------- 188 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + L ++ ++++ I A + L L++ I+ Sbjct: 189 -----VEQYTKFRLPEISAIGPEILKNVQSSWITNFAGTAVSTAVEVLGGVLNLTTAIMV 243 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F+ G + + + + +V + TI+A + Sbjct: 244 AFYISIAGPRLRRSVCHWLAPSTQRRFLLAWTVVQDQTSNYLFSRTILAACSATCMAIFL 303 Query: 234 WLAGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + VP + L + + +++ +P G + ++ I+ A + ++ + I Sbjct: 304 MIIHVPYWLPLALFSGVVSQFVPTIGTYLGGALPVLFAWGDRGIWYAVGVVVFITVYQQI 363 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L P + + + F ++ G LG F+ + A I V++K S Sbjct: 364 ENLLLSPKVSERTMDINPCVAFLTVLFFGSIFGALGAFLALPITASIQVLFKVSTKQYD 422 >gi|322390053|ref|ZP_08063589.1| membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143260|gb|EFX38702.1| membrane protein [Streptococcus parasanguinis ATCC 903] Length = 375 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 106/318 (33%), Gaps = 6/318 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L A + + + PI + F +I V + + + + +L Sbjct: 37 VLNTILLPFLIAGFLYYITNPIVELLEKHLKIKRVFGILITLVLLFGIIGLGIFYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ + R LS P ++ LS + N Sbjct: 97 INQLTSLINSTQGLYWEVQSLVRKLSTNPL------FQNVNIQSTIQQLNLSYMDILQNL 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ +I + L +F DG + L+ + + Sbjct: 151 LNSVTNSLGSVVNTIVNTVFILIMTPVFLVYFLVDGKKLLPMLERTILRNDKLHISSLLI 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G++I A G + Y G+ + + + + +IP P Sbjct: 211 SLNETVSRYISGISIDAFIIGTLAYIGYSFIGLKYALVFAIFSGLANLIPYVGPTIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I ++ ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MIITYAFTDMDMMIKAVIYMLIIQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGI 330 Query: 326 LGLFIGPVLMALIAVIWK 343 +G+ + + ++ I K Sbjct: 331 IGMVVAIPVYSIGKEIVK 348 >gi|239977967|ref|ZP_04700491.1| putative integral membrane protein [Streptomyces albus J1074] Length = 346 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 114/347 (32%), Gaps = 17/347 (4%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +L+ + ++ P++ L++ +WP+ + F+ A + TV Sbjct: 2 LLVAVAVTAALWLVGQMWSVVWPLVVGLLLTTLTWPL-ARFLRNHSWPPALAASVVTVFA 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + E L V+ + L G + + Sbjct: 61 LVVAAGIVALIAVPVASESGTLADGVIAGVEQ-------LRTWAAGPPLNIGDAEITKAM 113 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++ L ++ + + +FFF +DG L Sbjct: 114 DAGIERLQSSLGATVSTVATGLSTVVHGVVVAVIAVF-----LMFFFLKDGPRFLPWLTR 168 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + ++ + + + +G W+ GVP + L V+T + Sbjct: 169 QLPGRLAVDIPTVAERCWNTLGAFIRSQALVGLIDAVFIGLGLWILGVPLVLPLSVLTFV 228 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + +A + + + +P + + L Sbjct: 229 GAFVPIVGAFFAGFVAVLIALVSNGLTDALIVLAIIIVVQQLEGNVFQPMIQSRGLGLHA 288 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G G++G + ALI VIW+ + E + Sbjct: 289 AVVLLAVTLGGSLAGIVGSLLAVPAAALIGVIWRYIREQLAEPPHEP 335 >gi|228998127|ref|ZP_04157726.1| hypothetical protein bmyco0003_26940 [Bacillus mycoides Rock3-17] gi|228761662|gb|EEM10609.1| hypothetical protein bmyco0003_26940 [Bacillus mycoides Rock3-17] Length = 376 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 122/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + +K S V + V+ LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLERKGVSRIISIVSIYILVIGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G L+ + Sbjct: 103 FLVVTVIPIIKDQVNALIDNLPYFGHEVERAARRF----GESNIIGKIQDSLNIDVGSIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T TN + + + F + L+ + + LF+ +DG + + Sbjct: 159 KDSTINFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPRYFLRFIPEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K I + I S G I+++ G++L Y + G+ V L V+ I+ ++P Sbjct: 219 RRSSAKLILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAVLAMIVNVVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + I K + P ++G + + + F Sbjct: 279 YVGPIIAILPALIIAFIDSPAMILKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGIMGVILAIPGYAILKVL 364 >gi|257865853|ref|ZP_05645506.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257872187|ref|ZP_05651840.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257799787|gb|EEV28839.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257806351|gb|EEV35173.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 371 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 114/334 (34%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + + F ++ + ++ I+ + + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPIVLFLMKTTKIKRLFAVILVLLLLVAAIILIFVSVIPNL 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L + ++ ++D P ++ LS L Sbjct: 100 VSQITSLAENIPTFAKNMESWISRIADDPFFKQID------IAQQLENLNLSYGSLLQQF 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + I+ + LF+ +DG + L ++ + Sbjct: 154 LSGLSTSLGSIVSTIASATMIIVTVPFILFYMLKDGEKLVPNLKTVFPERRREQIVGLLG 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I I YW+ GV GVI + +IP P Sbjct: 214 DLNKTLSNYISGQAIECIFVATFTFIGYWMIGVNYAFLFGVIAGVTNLIPYLGPYLGLIP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + F A + + + + P ++G + + L L+ GL Sbjct: 274 AVLVTVFDEPFRALLCCVVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLLVAGNLAGL 333 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I + IK++K K + Sbjct: 334 LGIFLGVPFYAICRTIVVFIVRLIKDDKIKKNQE 367 >gi|302542081|ref|ZP_07294423.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302459699|gb|EFL22792.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 407 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 119/362 (32%), Gaps = 22/362 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLK--------GFFAPVLSALIIGFTSWPIYSSFISK 54 ++ P+ + R M++ + LV+ Y L G VL A + P ++ Sbjct: 34 QSARMPRWLPRAMVLALALVACYRLATWAFDQLTGLLLNVLIAFFLALAIEPAVDRMAAR 93 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 I + ++ L ++ +V ++ V W++D Sbjct: 94 -GVRRGLATGIVFIGILVAAAGFFTLLGSMLADQIMTMVEDFP---KYLDQVVSWMNDTF 149 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + L H L ++++K + + + A G +F +++ Sbjct: 150 HTRLSRLEIQDSLLHSDWL----QSYVKNSADNVLDVSAQVLGGLFRLLTVTLF-----A 200 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+F DG + + L S+ + I ++A+ G+ Sbjct: 201 FYFAADGPRLRRALCSVLPPNRQTEVLRAWEIAVAKTGGYIYSRGLMALISGVAHYILLE 260 Query: 235 LAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GVP AL V +++ IP A+ + + N + A + ++ + + Sbjct: 261 SLGVPYAPALAVWVGLISQFIPTIGTYLAGALPMLIAFTINPWYAIWVLVFVVVYQQFEN 320 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+P + + + +F ++ G +G +G I A + I Sbjct: 321 YLLQPRITSRTVDIHPAVSFGSVIAGTALLGAVGALIAIPATATLQAFLGAYIKRYDVTD 380 Query: 354 EK 355 + Sbjct: 381 DP 382 >gi|91789517|ref|YP_550469.1| hypothetical protein Bpro_3669 [Polaromonas sp. JS666] gi|91698742|gb|ABE45571.1| protein of unknown function UPF0118 [Polaromonas sp. JS666] Length = 390 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 115/342 (33%), Gaps = 20/342 (5%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ +L SL+ L F P++ L+ + P+ + K+ A + ++++ Sbjct: 38 LVILAVLASLFMLHWAKAVFIPLMLGLLFSYALSPVVNWLELKRVPR-WLSAAVLLLAIL 96 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 Y E +L+ + LA Q + + P G + Sbjct: 97 GAI----GSTAYSLRNEASQLLESLPLAAQKFRQAVKTRAGKPDGALENVQKAASQIEQA 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRF---------GMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + G + + F + L ++ +F G Sbjct: 153 ARESGTASPGSSRGAMRVVVETATFNVRDYLWTGTLGLLTLIGQFTVVVFLTYFLMLSGD 212 Query: 183 SISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++L L + + I+ + + G++ A + G+ + Sbjct: 213 TFCRKLIKLAPGFSSKKITLQALHEITGQIQRYLQVQLLASALVGVLTWLALLIIGLDNA 272 Query: 242 VALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G+ ++ ++P + S + L G++ A + +V P+ Sbjct: 273 AVWGIAAGVLNLVPYVGSLVTAGASGLVGFLQFGSLDMAIVVAGASLFIHMLVGNLFTPW 332 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L +L + F GL+ G+ GL +G ++ ++ + Sbjct: 333 LTSRASRLSPVAVFVGLLAWGWLWGVWGLLLGIPILMIVKSV 374 >gi|314966308|gb|EFT10407.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] Length = 386 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMRIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ S + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPSHD 379 >gi|309808761|ref|ZP_07702647.1| putative membrane protein [Lactobacillus iners LactinV 01V1-a] gi|309810014|ref|ZP_07703861.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D] gi|312870682|ref|ZP_07730790.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a] gi|308167997|gb|EFO70129.1| putative membrane protein [Lactobacillus iners LactinV 01V1-a] gi|308169654|gb|EFO71700.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D] gi|311093793|gb|EFQ52129.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a] Length = 380 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 120/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPMLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIVNTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ LFF +DG I+ L S Sbjct: 163 NT----GKASFNLFLENLFGAVNVISMLIVTLLTAPFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|260463360|ref|ZP_05811561.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259030950|gb|EEW32225.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 402 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 108/319 (33%), Gaps = 13/319 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ + LY P ++ +++ + P+ + S V+ ++ + + ++ Sbjct: 42 LAVLALFLYVFSDILLPFVAGMVLAYFLDPVADRL-QRLGLSRFMATVVILITFLIVLVL 100 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L +M + K+ L + L K + L+ Sbjct: 101 AFVILIPVLATQMADFAGKLPEYLTR-------LQSLITSFDPKWLEEKFGVNANGLRDG 153 Query: 137 SETFLKTNGIDFIPRFAS--RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L + F S GM + + + F+ D + +DS Sbjct: 154 LNSLLTSGFGLITTVFTSLWSSGMALVSVVSLFVVTPVVAFYMLLDWDRMVAVIDSWVPR 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A + I+R + G + + G + + L G+ + +G+ +++ I Sbjct: 214 DNVATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFI 273 Query: 255 PGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P ++ +++ + + + + I FI L+P LVG + L + Sbjct: 274 PYVGSLTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVW 333 Query: 312 TFFGLVGGVRTMGLLGLFI 330 F L G +GL I Sbjct: 334 LMFALFAFGALFGFVGLLI 352 >gi|126739190|ref|ZP_01754884.1| membrane protein [Roseobacter sp. SK209-2-6] gi|126719807|gb|EBA16515.1| membrane protein [Roseobacter sp. SK209-2-6] Length = 361 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 121/342 (35%), Gaps = 18/342 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I + L+FL P + I + PI + S + + + +F+ Sbjct: 16 AVIFALVLWFLGDVLLPFVLGAAIAYMIDPIADRLEA-MGLSRAGSTAVIIIVALVVFLA 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + ++ +L +P D+ +A E + + + Sbjct: 75 TLLVILPTLIYQLIDLTR----------VLPEAFRDL--RSFAQEHFPSLFTEGSRAQQT 122 Query: 137 SETFLKTNGIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T I G ++ + ++ + + + D + ++D L Sbjct: 123 IASIAGTLQGKGIELAEGIVGSAASLVNVIVLMVIVPVVAVYLLLDWDRMVDRIDELVPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + V+ S GM + + G A + G+ +A+G I ++ I Sbjct: 183 DHQPVIRRLARDIDAVLHSFIHGMGTVCLILGSYYAVALMIVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L + G+ ++ + A I L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWWSIGAVAAIFAFGQVIEGNYLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + + A + V+ + + E++ Sbjct: 303 LLLALSVFGALFGFVGMLVAVPIAAALGVLARFVVEQYLESR 344 >gi|116251363|ref|YP_767201.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256011|emb|CAK07092.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 374 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 105/327 (32%), Gaps = 11/327 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L Q + + LY P ++ + I + P+ + S + Sbjct: 9 ILKRQIFFWLAALVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATI 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V+ + +F + L+ L + + + ++ + W Sbjct: 68 GILVAFVIVFTLALMILIPVLISQFNDFAQRLPGYISQLQQFITQAQNSLLPDWVENQMG 127 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + FL + G +D ++ + F+ D + Sbjct: 128 TIKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRM 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++D + + ++I++ + + I G + + G+ + L G+ + + Sbjct: 183 IAKVDQWIPRDYVSDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLI 242 Query: 245 GVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+ +++ IP + V++ + L ++ + F+ L+P L Sbjct: 243 GLFAGMISFIPYVGSMVGLVLAVGVALVQFWPDYPWIGLVLVVFFSG-QFLEGNILQPKL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLG 327 VG + L + F L G +G Sbjct: 302 VGSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|313764012|gb|EFS35376.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313771457|gb|EFS37423.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313802245|gb|EFS43471.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313808117|gb|EFS46591.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313811416|gb|EFS49130.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313812599|gb|EFS50313.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313814861|gb|EFS52575.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313818884|gb|EFS56598.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313820711|gb|EFS58425.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313822522|gb|EFS60236.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825682|gb|EFS63396.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313828024|gb|EFS65738.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313830829|gb|EFS68543.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313833257|gb|EFS70971.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|313839013|gb|EFS76727.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314915044|gb|EFS78875.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314918624|gb|EFS82455.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920433|gb|EFS84264.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314925625|gb|EFS89456.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314932107|gb|EFS95938.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954627|gb|EFS99033.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314958574|gb|EFT02676.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314959822|gb|EFT03924.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314962395|gb|EFT06496.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314973717|gb|EFT17813.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976364|gb|EFT20459.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314979205|gb|EFT23299.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314983353|gb|EFT27445.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|314989501|gb|EFT33592.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315084107|gb|EFT56083.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315085309|gb|EFT57285.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089076|gb|EFT61052.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315096492|gb|EFT68468.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|315098899|gb|EFT70875.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100861|gb|EFT72837.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315108079|gb|EFT80055.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327326742|gb|EGE68525.1| membrane spanning protein [Propionibacterium acnes HL096PA2] gi|327443057|gb|EGE89711.1| hypothetical protein HMPREF9570_02563 [Propionibacterium acnes HL043PA1] gi|327445180|gb|EGE91834.1| hypothetical protein HMPREF9571_02166 [Propionibacterium acnes HL043PA2] gi|327446899|gb|EGE93553.1| hypothetical protein HMPREF9568_00856 [Propionibacterium acnes HL013PA2] gi|327450161|gb|EGE96815.1| hypothetical protein HMPREF9581_02609 [Propionibacterium acnes HL087PA3] gi|327455281|gb|EGF01936.1| hypothetical protein HMPREF9586_01317 [Propionibacterium acnes HL083PA2] gi|328752827|gb|EGF66443.1| hypothetical protein HMPREF9579_02370 [Propionibacterium acnes HL087PA1] gi|328759249|gb|EGF72865.1| hypothetical protein HMPREF9588_00093 [Propionibacterium acnes HL025PA2] gi|328760263|gb|EGF73836.1| membrane spanning protein [Propionibacterium acnes HL099PA1] Length = 386 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|313898316|ref|ZP_07831853.1| putative membrane protein [Clostridium sp. HGF2] gi|312956698|gb|EFR38329.1| putative membrane protein [Clostridium sp. HGF2] Length = 400 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 100/313 (31%), Gaps = 14/313 (4%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIP 105 + K + + AV+A + + + L L + LV Sbjct: 71 LLGRLRMKPQHKRSIAAVLAVLLGIIIVCAFLALLLPQLFDSIFSLVKAFPGYVEDFQKF 130 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 ++ + + L L ++ F L Sbjct: 131 ALDFVEKYAIDTQQVTNYITDTDFFEKLTGFVTDALP---------QMAKATYAFGSTLL 181 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV----PKVIRSTFLGMTII 221 +I+ I+A + D +S + LFP + + + + +G I Sbjct: 182 NILLSIMAGLYMLIDKERLSGYAKKINYALFPKEISEYLHRMVLASGDIFNNFIVGKAID 241 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 ++ G++ + P + L VI + MIP P I +L + A Sbjct: 242 SLIIGILCYIGSLIFQFPYALLLSVIVGVTNMIPVFGPFIGAVPGIVILFIIHPITALYF 301 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ L P ++G + LP + F + G G++G+FIG A+I + Sbjct: 302 ALFVFALQQFDGNILGPLILGDKLGLPSIGILFSVCVGGGLFGIIGMFIGVPCFAVIYMA 361 Query: 342 WKESIMAIKENKE 354 KE + + KE Sbjct: 362 VKEFVNYRLKKKE 374 >gi|332174221|gb|AEE23475.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 356 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 121/353 (34%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P +M +++ + + L L PVL A +I + WP+ +S+ +F + Sbjct: 15 DPDSVMLLIMLIAVFLLLAVLGTILMPVLVAAVIAYLLDWPVSQ--LSRAGLRRSFACSL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 S + L I+ + + + L+ ++ H W+ +P Sbjct: 73 VIFSFLTLCILTFIGIVPVVSQQSINLIREMPQIWGHAQV---WVLHLPE----QYPDFV 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL Q + + + G + S + ++ + + +FF +D + Sbjct: 126 HLGDVQDMLDGINERIVSLGEQLLSASVSSL-GSLASLLIYLVLVPLMVFFMLKDKDQLL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L K++ + I + G I I G V + L + + LG Sbjct: 185 ANLSPLLPS-QRRLIKQVGSEMNTQIANYIRGKVIEIIIVGTVSAVTFALMDLRYALLLG 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA + V++ L + I L + + + L P L Sbjct: 244 VLVGFSVLIPYIGAAVVTIPVAVVALFQWGITPDFWWLMIAYGVIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ + ++E + Sbjct: 304 AVSLHPVYIIIAVLFFGGLWGFWGVFFAIPLATLVKAVANAWKGPLQELPPAV 356 >gi|303238314|ref|ZP_07324849.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302594018|gb|EFL63731.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 355 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 133/347 (38%), Gaps = 30/347 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + +R MI+ I+ LY ++ L I+ + + I S SK + + Sbjct: 8 LKKKSTIRIMILAILFFLLYLMRDMMNLFLLTFIMAYLMYRIQSFISSKISKFVKVGNRV 67 Query: 66 ATVSVMCLFIVPLLFLFYY----GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 T+ + +F+ + Y + E K+++ +V+ + Sbjct: 68 VTICLYMIFVFLAILGIYNFLPLVIQESKDVIDQVISYYTQNEAA------------IEK 115 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + ++ G+D + + AS G + D ++II + FF + Sbjct: 116 YLLSALKKFNIDNLDISKYVGK-GLDILAKSASSIGKLSFDMFIAIILSL----FFLLER 170 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGV 238 I++ ++ +I K I S +IA+ ++ + G Sbjct: 171 TRIARFTLKFKTSSISVFYNEIEYFGKKFINSFGKVIEAQFLIALINSILSTIVLSILGF 230 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKT 295 + LG++ ++ +IP G IS +S+ G + T LF+WG I + + Sbjct: 231 DKVIGLGIMIFVLGLIPVAGVIISLVPLSLIAFNTGGVK--TVLFVWGMIAVLHALEAYV 288 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L P L+ +LP TF L+ G + GL IG PV M ++ ++ Sbjct: 289 LNPKLMSSKTELPVFYTFIILLIGEHFFKVWGLIIGIPVFMFILDLV 335 >gi|167032277|ref|YP_001667508.1| hypothetical protein PputGB1_1265 [Pseudomonas putida GB-1] gi|166858765|gb|ABY97172.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 357 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 125/342 (36%), Gaps = 14/342 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I V LY L P L +++ + + P+ + V+ +F + Sbjct: 13 ALLIAVLLYSLHNILTPFLVGILLAYLADPLVDRLERLGLSRTW--------GVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++V + + WL +P L + Sbjct: 65 FTLVLLALLLVLVPMLAKQLVRLYELAPQMLDWLEQVALPWAQSRLGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +T + + + A+ + + + +++ + + F+ RD + +L L Sbjct: 125 AIGAHMGQTTDIVGMLLSHATASSLALMAWLANMVLIPVVGFYLLRDWDLMMGKLRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ +V+ + G ++ + G++ + L G+ + +G++ + A+ Sbjct: 185 RQREPQVMGLAGECHEVLGAFVRGQLMVMLALGIIYSAGLMLVGLELGLLIGMLAGLAAI 244 Query: 254 IPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P I ++ G+++ + + + L P LVG I L + Sbjct: 245 VPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F ++ G G G+ + + A+I V+ + KE+ Sbjct: 305 AVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHMHDLYKES 346 >gi|328752574|gb|EGF66190.1| hypothetical protein HMPREF9563_02304 [Propionibacterium acnes HL020PA1] Length = 386 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 124/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|315080225|gb|EFT52201.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] Length = 386 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 125/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFILVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHTNEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|299141364|ref|ZP_07034501.1| membrane protein [Prevotella oris C735] gi|298577324|gb|EFI49193.1| membrane protein [Prevotella oris C735] Length = 368 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 126/338 (37%), Gaps = 17/338 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L FF A + +P+ +K ++++ T+ ++ I + +L Sbjct: 33 VLLPFFIAWFMA----YLLYPVVQFIENKLHIRVRAISILLTMLLVIAVIGGVFYLIIPP 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE-TFLKTN 144 M+E + + V++ H L++ + SE + H + + + Sbjct: 89 MIEQFDKLQTVLMRWVHHTTHTNNLTN-----YISEWIQANQEHIERFFKSKDFGDTIKS 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F S+ + L S I ++ +FF D ++ + +W+++ Sbjct: 144 AMPKLFSFVSQTASVILSIIASAITLLY-MFFILLDYEYLTTNWIRIFPKKNRPFWQELL 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V + + + G ++A+ G++ + + G P + LG++ I+ ++P + Sbjct: 203 QDVKRELNNYVRGQGLVALCMGIMFCIGFTIIGFPMAIGLGILIGILDLVPYLHTFALIP 262 Query: 265 VSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + ++ G F L + I D + P ++G + L L Sbjct: 263 TAFLAMLKAADTGQNFWIVFGLALLVFIVVQAITDFIVTPKIMGKAMGLNPAILLLSLSI 322 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +G +GL I L L+ W+ I ++ + K Sbjct: 323 WGALLGFIGLIIALPLTTLLIAYWQRYITKEEQGQNKP 360 >gi|295706856|ref|YP_003599931.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] gi|294804515|gb|ADF41581.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] Length = 369 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 123/347 (35%), Gaps = 16/347 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + R + +I+ + FL + + P + A I F P+ + F K ++ Sbjct: 8 RLFRLACVLVIIAASIFLSYYVSSLIYPFIIACCIAFFINPMVNLFELKLRLPRYLAVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASEL 122 + V + L + L + L V + + ++ +P + + Sbjct: 68 SMVLIFSLLAGLITLLITEIVAGSTYLAKVVPTNFKEVVIFIENIATEQILPFYERITSM 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM-------IFLDYCLSIIFMIIALF 175 + + Q+ + + + + + F + + IIF ++A F Sbjct: 128 FNNLNTGQQATILSNIKGVGNHIAQTVGDFLQNVLQSIPVLLSVLPNAATVIIFSLLATF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D + + + + + + + + +++ + Sbjct: 188 FISKDWYKLMAKSSVFIPKKVRENGQTVVLELKNALFGFIKAQLTLISITTIIVLFGLLV 247 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + + ++ ++ ++P G + F IY N+ A L + A+ L + + Sbjct: 248 LRVDYAITVALLIGLVDILPYLGTGLVFVPWMIYAFATDNVSFAVGLSVLYAVVL-VQRQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P ++ I L L T L G + +G GL +GPV++ ++ + Sbjct: 307 IMEPKILSSSIGLDPLATLISLFVGYQLIGFFGLIVGPVILVILKTL 353 >gi|197285426|ref|YP_002151298.1| hypothetical protein PMI1567 [Proteus mirabilis HI4320] gi|227355910|ref|ZP_03840302.1| possible permease [Proteus mirabilis ATCC 29906] gi|194682913|emb|CAR43285.1| putative membrane protein [Proteus mirabilis HI4320] gi|227163898|gb|EEI48800.1| possible permease [Proteus mirabilis ATCC 29906] Length = 362 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 121/351 (34%), Gaps = 16/351 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ I +I+ +YF G AP+L A+++ + WP + + K + + I Sbjct: 15 DPQVIALVVILIAGFSIIYFFSGILAPLLVAIVLAYLLEWPTH--LLEKLGCARIWAVSI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWT 124 + + + +L L + L+S + R L P M + Sbjct: 73 VLTLFIGISAIVILILAPTVWQQAMTLISDIPNMINKFNAFARELPERFPALMDVGIVDM 132 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++E+ LK AS G+I L + +I + + FF +D + Sbjct: 133 MAENLRSKFSTVAESVLK-------VSLASLIGVITLS--IYLILVPLMTFFLLKDKQQM 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + ++ V + I + G + G+ + + V L Sbjct: 184 LNAVRRVLPK-NRILAAQVWIEVNQQITNYIRGKVTEMVIVGVFTYFVFAFFDLRYSVLL 242 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVG 302 V+ + ++P GA ++ V + L + + + LF+ + + L P L Sbjct: 243 AVLVGVSVLVPYVGAVLATIPVIVIALSQWGLGSDFWALFIAYLVVQGLDSNLLVPILFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + L ++ G G+F L LI + I Sbjct: 303 EAVNMHPLVIILSVIIFGGMWGFWGVFFAIPLATLIKAVLHALPDEIANEP 353 >gi|120435935|ref|YP_861621.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117578085|emb|CAL66554.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 347 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 130/345 (37%), Gaps = 23/345 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M++ + ++ + I+ FL KGFFAP+++A+I+ P+ K Sbjct: 1 MISKKKLLFYSATIIVATYFLFLGLTKAKGFFAPMITAVILSLIVLPLSQRMERKL--KR 58 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A++ ++ + + I L+ + + + E ++ + P A Sbjct: 59 PLAAILNSLLLFLISIG-LMAIVSFQVRSFAEDWPQIKETME------------PKIENA 105 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E +H + ++ T + ++A F + + + + +FF Sbjct: 106 KEFALEHTPLNKQDIEEAKNSSSTMDLQP-GKWAKTFMSGLSSFLANYLLTFVYIFFLLN 164 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L + K I +V LG I+ ++ ++GV Sbjct: 165 YRHIFKNFLLRVFPDEKQQTIKTIIVKSAEVAPQYLLGKLILMGLLAVIYSIGLGISGVN 224 Query: 240 SHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + + VI A++ +IP + AV+ L G+I + L I F+ L+ Sbjct: 225 NFILVSVIAAVLTLIPYIGNVIGFVMAVAFGFLTSGDITVLIGIALTFTITQFVESYVLQ 284 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P++VG + + ++ G G++G+ + +MA+I V+ Sbjct: 285 PYVVGERVDVHPFFVIVSVILGNMVWGVIGMILAIPIMAIITVVL 329 >gi|302331566|gb|ADL21760.1| Putative integral membrane protein [Corynebacterium pseudotuberculosis 1002] Length = 419 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 97/302 (32%), Gaps = 14/302 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP SKK +I + + + K+LV + Q Sbjct: 63 VLWPPVRWLRSKKVP-PATAVLIVAIGFFGAIGSIFAAMAPSVSSQSKDLVDRANEGVQR 121 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + W P + S++ + Q+L+ S + +I + Sbjct: 122 AL---HWAEHGPLNLDTSQVDGYIQNVTQALQEHSRNIANGVFSGLTTASSILITIILML 178 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 FFF +DG + + + ++ + V+ I++ Sbjct: 179 IL---------SFFFLKDGTRFLPMVRRVAGPNLGWHLTEVLTRIWNVLAGFIRAQAIVS 229 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL 281 + + +++G + VP + L V+T IP GA + + L+ + NA Sbjct: 230 LVDAVLIGIGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGVSNAIFA 289 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I L+P L + L + G ++G F+ + A +AV+ Sbjct: 290 LILIITVQQIEGHILQPVLQSRAMNLHAAVVLLSVTIGSALFSVVGAFLAVPVAATLAVL 349 Query: 342 WK 343 + Sbjct: 350 IR 351 >gi|295681206|ref|YP_003609780.1| hypothetical protein BC1002_6421 [Burkholderia sp. CCGE1002] gi|295441101|gb|ADG20269.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 387 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 113/338 (33%), Gaps = 8/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + + L+ L+ P L +I + P + A++ Sbjct: 43 QSLIWGAVALSAGILLWSLRAVLTPFLLGAMIAYILQPGVEWLARHRTPR-GLAALLMIS 101 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L F E+ E +V + + P W ++ L+ Sbjct: 102 VFALVITSVALLAFLVIQQEVPEFARQVPSLAAKLEAILK-----PRLAWLGVSYSLDLA 156 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + R+ G + + + + + + LF+ D +L Sbjct: 157 SVRDWVVAHLIASEQGAALTVWRYLGTSGNLMIAVVGNAVLVPLVLFYLLYDRHEAFTRL 216 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +S + + + +++ G ++ A LAG+ + +G++T Sbjct: 217 ESFVPRRWLDRTRDFVAEIDRMMSQYLRGQLLVVAILAAFYPVALALAGLSVALPIGLLT 276 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGPIK 306 A+ IP G + + + L++ + + + + + + L P VG I Sbjct: 277 AVAVFIPYVGFASALSLALLAALLQFHDWYGLGAVIVVYGVGQILESAILTPRFVGERIG 336 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L F L+ + G G+ + A+ A +E Sbjct: 337 LHPLAVIFSLLAFGKLFGFFGVLLALPASAVFASALRE 374 >gi|86157493|ref|YP_464278.1| hypothetical protein Adeh_1066 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774004|gb|ABC80841.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 359 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 110/343 (32%), Gaps = 19/343 (5%) Query: 9 QGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + R + + I L+ + P + + + P+ ++ ++ + Sbjct: 16 RATARALTLLAIGAGFGFLWLARDLLVPTALGVTLALSVHPVVAALQRRRVSRTVASVAG 75 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++V L + L ++ L + G+ + Sbjct: 76 TLLAVAVLVGI------------GYVLWGRIAAFADELPGYEGRLREAAAGIRRHAAHLQ 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +K L + ++ L+F +G Sbjct: 124 AQSEQLVQAPRRPGEVKVQEGVPWGSLLVGTAQGALTFAGQATVVVFVLYFTLAEGPRFR 183 Query: 186 QQLDSLGEHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +L + + + ++ + + + + L + G+V + Y L G+ Sbjct: 184 TKLLAWADRRPRGRARVLAALEELHRDVEQYMLNRVALNAALGVVTWAVYALYGLEHAAI 243 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+ TA++ IP G A F ++ LL G + + + + + + P + Sbjct: 244 WGITTALLHFIPYVGPALGLFLPAAMALLQYGTAKDVALVTAIYLVLVNVQGNVVDPLFL 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G ++L L F G + G +GLF+ L++ + ++ + Sbjct: 304 GKQLRLSPLVVFLGSLFWFWLWGPVGLFLAVPLLSTVRIVCRH 346 >gi|262278141|ref|ZP_06055926.1| permease [Acinetobacter calcoaceticus RUH2202] gi|262258492|gb|EEY77225.1| permease [Acinetobacter calcoaceticus RUH2202] Length = 397 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 122/326 (37%), Gaps = 18/326 (5%) Query: 28 KGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLFIVPLLF-L 81 K P + A + + P+ S F+ + T+++ ++VPL++ Sbjct: 26 KPVVIPFIGAFFLAYLFSPLVDVLVKIKLPRWLAISVVFIGIGVTLTIALWYLVPLIWKQ 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + + + W+S + +++ +T Sbjct: 86 LVYARDSIPAGIHWINAT------FLPWVSST---FNLQAMEIDTEQMSKAVMEYVQTNY 136 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + ++ G+ F+ +++ + I F+F D + Q L L + A Sbjct: 137 SADSIQSVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRRYEANTL 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I V+ + G ++ + G+V L G+ + +G++ + ++IP Sbjct: 197 QIVGECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAV 256 Query: 262 FTAVSIY--LLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ L G + + + + I I L+PFL+G I L + F ++ Sbjct: 257 GIIAAVIASLFQFGLDWMHLLLVGVVFMIGQAIEGYILQPFLLGDKIGLSPVAVVFAVLA 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKE 344 G + G LG+ I + A+I V+ K Sbjct: 317 GAQLAGFLGMLIALPVAAVIVVLLKH 342 >gi|300172620|ref|YP_003771785.1| integral membrane protein [Leuconostoc gasicomitatum LMG 18811] gi|299886998|emb|CBL90966.1| Integral membrane protein [Leuconostoc gasicomitatum LMG 18811] Length = 372 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 111/320 (34%), Gaps = 10/320 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST----FLAVIATVSVMCLFIVPLLFL 81 F+ F P+L A + + PI K + F +I V + + L+ L Sbjct: 40 FISTVFVPLLVAGFLYYVLKPILKLVTKIKIFGKSIPHQFAVIITFVLFLAVIATALIVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q + R+ ++ W L HLS + Sbjct: 100 VPTLIREITNLITAMPSFAQ---DMQRFATETINSRWFENL---HLSVNADQIRSAVGQY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + ++ ++++ + + LF+ DG + + Sbjct: 154 AASFLNITAGTLGTVVSTVTSVTINLVTIPVVLFYMLSDGDRLVPAIKKAFPDRHAQKIS 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + I G I + G+ + Y + G P L V+ I ++P P Sbjct: 214 ELTTKMDNTIEKYISGQAIEMLFVGVTMAIGYLIIGQPYAWLLAVVAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + +F+ + + + P ++G + + L L+ Sbjct: 274 GVIPALIVASTQSWKQMIFVFIVMTVVQQLDGNFIYPNVIGKSLAIHPLTIMLLLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G++G+ + + A++ VI Sbjct: 334 LWGIVGMIVIVPVYAVLRVI 353 >gi|296128904|ref|YP_003636154.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296020719|gb|ADG73955.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 384 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 125/345 (36%), Gaps = 16/345 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + Q + + +++++L L PVL AL++ P+ + + + Sbjct: 37 RVGTRSVQVLAVLALGAVVVLALTRLTLVVIPVLIALVLASAISPLVGALRRR--GVPSL 94 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 LA + + + +++L +++ + A + ++ +P Sbjct: 95 LATWIALLGLVALLAAIVWLVVRAVVD--QWDELRDQALDGFDELQTYVQGLP------- 145 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + E+ D + A D+ M++ LFFF +DG Sbjct: 146 ----FDVTDEQIASVRESAAGLLRSDAVGSGAIAGVSQTADFVAGFFIMVVVLFFFLKDG 201 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +I + L E +++ + + G IIA + + +G L GVP Sbjct: 202 PAIWEFLLRPFEGERYLRGRRVGDATVRALGGYVRGTAIIAAVDAVGIGIGLALVGVPLV 261 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L V+ ++A +P GA I+ ++ L+ A + + + L+P + Sbjct: 262 IPLSVLVFLLAFVPLVGATIAGVLAALVALVAVGPVQALVVVGIVVLVNQLEGDLLQPVV 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +G ++L L L G G+ G + L A + Sbjct: 322 MGRQLRLHPLVILVALTAGTVLAGVTGAVLAVPLAASAWRAVQVW 366 >gi|104780561|ref|YP_607059.1| permease [Pseudomonas entomophila L48] gi|95109548|emb|CAK14249.1| putative permease [Pseudomonas entomophila L48] Length = 357 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 122/328 (37%), Gaps = 14/328 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P L +++ + + P+ + V+ +F + L ++ + Sbjct: 27 LSPFLVGILLAYLADPLVDRLERAGLSRTW--------GVVVVFSLFTLIFLALLLVLIP 78 Query: 91 ELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKT-NGID 147 L +++ + + WL +P L + + E +T + + Sbjct: 79 MLAKQLLRLYELAPQMLDWLQHVALPWVQSRLGLADGFWKFDKIKAAIGEHMGQTTDIVG 138 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + A+ + + + +++ + + F+ RD + +L SL + ++ Sbjct: 139 VLLSQATASSLALIGWLANLVLIPVVGFYLLRDWDLMMAKLRSLLPRQRESQVVGLAGEC 198 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ + G ++ + G++ + L G+ + +G++ + A++P I ++ Sbjct: 199 HEVLGAFVRGQLLVMLALGVIYSTGLMLVGLELGLLIGMLAGLAAIVPYMGFIIGIGAAL 258 Query: 268 ---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 G+++ + + + L P LVG I L + F ++ G G Sbjct: 259 VAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVAVIFAILAGGELFG 318 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ + + A+I V+ + KE+ Sbjct: 319 FTGVLLALPVAAVIMVLLRHVHDLYKES 346 >gi|262196494|ref|YP_003267703.1| hypothetical protein Hoch_3308 [Haliangium ochraceum DSM 14365] gi|262079841|gb|ACY15810.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 452 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 124/353 (35%), Gaps = 15/353 (4%) Query: 4 TMLNPQGIMRWMI-MFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 T ++RW++ + ++++ + L+ AP+L+A I + P+ + Sbjct: 18 TQRQVMTMVRWLLYLVFVVIAYWVLQRLAPVLAPLLAAAGIAYLLDPLVEKLEAS-GMRR 76 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + L + L ++ + + V +WL+ G Sbjct: 77 VVAVSLLITGFLGLLGGSVFILVPLVAEDLARFAASLPTMIAE---VNQWLAG--YGFEV 131 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W +L L + S FG++ L ++ + F+F Sbjct: 132 PSRWEDYL-QSDKLSAMLNDVAGPATTFAAAALGSVFGLLGTLAELLLV--PVFAFYFLL 188 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + A + + +V+ G I + ++ + + + G+ Sbjct: 189 DWHEIIDATRRMIPPRHRATSISVIAEIDRVVSGWIRGQFTIVCIQAVLYAACFHVIGIH 248 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLR 297 +++G++ ++ +IP + A+++ L++ + + + L Sbjct: 249 LAISVGLLVGLLTIIPFLGTVVGAAITLVLVLLHWQGWVQLASVAAVFIVLHALEAAVLT 308 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P +VG + L F ++ G + +G G+ + + A +AV+ + + Sbjct: 309 PRIVGKRVGLGETGALFAVLAGGQLLGFTGVLLAVPIAASVAVLVRRLWRYYE 361 >gi|24379535|ref|NP_721490.1| putative permease [Streptococcus mutans UA159] gi|290580464|ref|YP_003484856.1| putative permease [Streptococcus mutans NN2025] gi|24377477|gb|AAN58796.1|AE014947_8 putative permease [Streptococcus mutans UA159] gi|254997363|dbj|BAH87964.1| putative permease [Streptococcus mutans NN2025] Length = 374 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 118/335 (35%), Gaps = 12/335 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV---IATVSVMCLFIVPLLFLFY 83 L F I+ Y K +S + L + V F++ ++ +F Sbjct: 39 LSPFLTGAAIGYIVNIVMS-AYERLYDKLIKSQSLLKAKRPLTMVLAYATFVLVVVLIFT 97 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ + ++ N I ++++ W S++ Q + L + + Sbjct: 98 IVLPDLIASLKSLLSINPKDIQ--NIINEVQHNKWVSKMLASFGGDTQ-ISSLISNYSRQ 154 Query: 144 NGIDFIPRFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 F+ + + +SI II + + + +Q + L + Y Sbjct: 155 ILSQFLSVLTNVLTSVTSIASALISIFVSIIFSMYVLANKEKLGRQFNLLIDTYLGKYSG 214 Query: 202 KISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +V F+G T+ A+ G + L +P +G++ A A+IP Sbjct: 215 TVHYLVGILHSRFHGFFVGQTLEAMILGTLTAIGMMLFNLPYAATIGILIAFTALIPVVG 274 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L++ + A ++ + + P +VG I LP + + Sbjct: 275 AYIGVTIGTILILTQSFSQAVVFLVFVILLQQFEGNVIYPRVVGSSIGLPSMWVLLAITI 334 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G GL+G+ + ++A + I K+ + + K Sbjct: 335 GGALAGLVGMLMAVPILASLYQIIKDHVYQKQTQK 369 >gi|270291074|ref|ZP_06197297.1| permease [Pediococcus acidilactici 7_4] gi|270280470|gb|EFA26305.1| permease [Pediococcus acidilactici 7_4] Length = 376 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 124/342 (36%), Gaps = 18/342 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + K S T+ V+ V + L + + Sbjct: 40 FISTVFMPLILATFLYYMLHPLVKLLMKVHYKKFRISRTWAVVLVFVGFLLLIVWGISSF 99 Query: 82 FYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + ++ +++ + ++A + + +P+ + K P + +E Sbjct: 100 LPSLIDQISQMLGNLPMIAKKLQVAIPQLVDH--------SWLRKVDFDPYLKNLNNE-- 149 Query: 141 LKTNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + F+ + G I + + +I + I LF+ +DG+ + + + Sbjct: 150 IGQYAEQFLANMTNSIGNIIAALTNITVIVITVPIILFYMLKDGYKLIPTISRIVPEHNR 209 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I I G Y + P + LGVI I +IP Sbjct: 210 KSVLNLFYSMSDTLSSYISGQVIECIFVGTFTVIGYMIIHQPYGLVLGVIAGICNIIPYV 269 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P S+ + I + + + I + + P ++G +++ L L+ Sbjct: 270 GPYFGIFPSLLVAIAQSPEQVISVIIVVLIVQQVDGNLIYPNVIGKSLQIHPLTIIILLL 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+LG+ + A++ V+ +++KI Sbjct: 330 VAGKLAGILGMILAVPTYAIVKVLINFIHHIWVLDRDKIEEK 371 >gi|225870497|ref|YP_002746444.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225699901|emb|CAW93811.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 384 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 107/296 (36%), Gaps = 5/296 (1%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + + + + +L++ + Q + + G ++ Sbjct: 89 LCMLLAYFTFISLIVWIISIVIPDLIASISSLTQFDTRAIKEVISDLGHNKLIARAINYI 148 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSIS 185 L + + FI + ++++ + + + Sbjct: 149 GGDAKLTETITNYSQQLLKQFIGVLTGILTSVTAVASAIINVVISFVFSLYVLASKEELC 208 Query: 186 QQLDSLGEHLFPAYWKKISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 QQ +L + Y K I +V R F+ T+ A+ G + ++ +P Sbjct: 209 QQATTLIDTYTGKYAKAIHYLVGLLHSRFRGFFVSQTLEAMILGSLTAIGMFILQLPFAG 268 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +GV+ A A+IP A+ L++ ++ A ++ I I + P +VG Sbjct: 269 TIGVLVAFTALIPVVGASIGAAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIYPRVVG 328 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G I LP + + G G++G+ + L A + + K+ I + + + SS Sbjct: 329 GSIGLPAMWVLMAITIGAALKGIVGMIVAVPLAATLYQVVKDHIHKKQALQNRQSS 384 >gi|315653902|ref|ZP_07906818.1| permease [Lactobacillus iners ATCC 55195] gi|315488598|gb|EFU78244.1| permease [Lactobacillus iners ATCC 55195] Length = 380 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 120/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPMLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIVNTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ LFF +DG I+ L S Sbjct: 163 NT----GKASFNLFLENLFGAVNVISMLIVTLLTAPFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|303240190|ref|ZP_07326710.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302592281|gb|EFL62009.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 365 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 132/353 (37%), Gaps = 22/353 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +I+F+ +FL F FAP+L++LI+ + P+ K T Sbjct: 14 TLLTLLIIFMFGKIDFFLLPFRKLVAAIFAPILASLILYYILRPL-VRLFQKFRIPKTAS 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWAS 120 VI + + L I + + + +L+S++ + I + Sbjct: 73 IVITFIVAIILIIAIGTNIGVIVVEQFDDLMSELYTNFDISYFSRDAFMNNKIFEYLPID 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L K + SL S+ F + I+ + LF+F +D Sbjct: 133 KLEQKGMEILDSLMNNSKNFFMG------------ILSTVTNISTIILMIPFILFYFLKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S+ L A +KI + K + S +G +A+ +G+++ Y + G+ Sbjct: 181 DEEFSKNLIEHLPKKHVANVEKILYDIDKALSSYLVGQMTVAMADGILMFIGYLIIGIKY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L + I A+IP P +I++ + N A +FL I I + P + Sbjct: 241 PLILSIFVVITAIIPFFGPYIGIIPAIFVGLTMNPLMAVKVFLLETIVQQIDGNFIAPQI 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + + + L+ G G +GL I + A ++V K K K Sbjct: 301 MRQKLNVHPVTVILLLMIGSALYGFVGLLIVVPVYAALSVTIKNVYRIYKVEK 353 >gi|121605986|ref|YP_983315.1| hypothetical protein Pnap_3095 [Polaromonas naphthalenivorans CJ2] gi|120594955|gb|ABM38394.1| protein of unknown function UPF0118 [Polaromonas naphthalenivorans CJ2] Length = 393 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 118/342 (34%), Gaps = 20/342 (5%) Query: 15 MIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ IL L+ L + F P++ +++ + P+ + ++ AV+ + Sbjct: 41 LVILAILAGLFVLQWARAVFIPIMLSVLFSYAFSPLVNWLEFRRVPRWLSSAVL-----L 95 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP--------RWLSDIPGGMWASELW 123 + + Y LE +L+ + A Q L + E Sbjct: 96 LAILGAMGSGAYLLRLEAAQLIEALPAAAQKLGRALKSSSGKSESALETVQRAASQIEQA 155 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T+ + + + I + + L + ++ +F G + Sbjct: 156 TRESAAVTGPNRGATRVVIEAPRFNIKDYLWTGTVGLLALIGQVTVVVFLTYFLMLSGDT 215 Query: 184 ISQQLDSLGEHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++L L + + + I+ + + G++ G A G+ + Sbjct: 216 FRRKLVKLAGPSLSKKKVTLQALHEISGQIQRYLQVQLLTSALVGVLTGLALMFLGLENA 275 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPF 299 A GV+ ++ ++P + A S + G+I A + + +V L P+ Sbjct: 276 GAWGVVAGVLNLVPYIGSLITAAASALVAFLQFGSINMALAVGGASVLIHTLVGNLLTPW 335 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L +L + F GL+ G+ GL +G ++ ++ + Sbjct: 336 LTSRASRLSPVAVFMGLLAWGWLWGVWGLLLGIPILMIVKSV 377 >gi|108757566|ref|YP_631778.1| hypothetical protein MXAN_3588 [Myxococcus xanthus DK 1622] gi|108461446|gb|ABF86631.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 367 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 114/340 (33%), Gaps = 10/340 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ L G PVL AL + PI + ++ + T+ + + + Sbjct: 26 LGLVFALLSVFGGVAVPVLLALSGAYIFNPIVTELEKRRLDR-TWGTTLVFAVGTLMLVG 84 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L+L E +L A+ +P L G +L + + Sbjct: 85 AVLYLIPVFREEASKLPDFFHRASTQVVPKVEGL----VGHSLPDLVRQRTTELGKQASE 140 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + FA + + L + + + FFF +D + + L Sbjct: 141 LVQSAGPAAARILASFAGNTARLVVT-LLGLSVVPVLAFFFLQDYPRLMGMVKDLLPRRA 199 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + V +V+ + G I+ ++ + A + + +GVI M+P Sbjct: 200 VGLVSRRFAEVDEVLSAFVRGQLIVGGVLSVIYAAGLSAARIDMAIVIGVIAGFGNMVPY 259 Query: 257 ---GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G I + V + L +G A + I + + P +VG + L + Sbjct: 260 LGTGVGIVLSLVGLMLSWQGPWQLAAVAATF-VIGQMLEGFVITPRIVGEKVGLAPVAII 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G +G+ + + A++ V+ + + + Sbjct: 319 LAILAFGELFGFVGILLAVPVAAILKVVLSVVVERYRRTR 358 >gi|121602761|ref|YP_989062.1| hypothetical protein BARBAKC583_0766 [Bartonella bacilliformis KC583] gi|120614938|gb|ABM45539.1| putative membrane protein [Bartonella bacilliformis KC583] Length = 404 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 120/333 (36%), Gaps = 19/333 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ Q + + ++ ++ P ++ +++ + P+ + + F ++ Sbjct: 46 MSKQILFWLGALISFILFMFIFGSILFPFIAGIVLAYFLNPV-IELLEEIGIHRVFGTIL 104 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELW 123 T+ ++ +F+V L L ++++ VS +P +++ I + + Sbjct: 105 ITLFIIVIFVVSLTILIPIISWQIQQFVSNG---------LPTYMNRIQTFFVEYNFDWI 155 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 + S + T L DFI F + G ++ ++ + + F+ D Sbjct: 156 RHYFGSDPSELQSNITALLGQSSDFITSFLNSLLRSGRSIVNIVSLLVVVPVVAFYMLLD 215 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + +DS A + I + + + G + + G + G+ Sbjct: 216 WQRMIETVDSWIPRDHLATVRSIFHEMDRAVAGFIRGQGTVCLVLGGYYAIGLTITGLNF 275 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL----LIKGNIFNATCLFLWGAIELFIVDKTL 296 + +G++ +++ IP + +S+ + + + + I FI L Sbjct: 276 GLVIGMLVGLISFIPYIGTMIGFVLSVGVSWVQFYPDDWGRIVIVMVVFFIGQFIEACIL 335 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +P LVG + L + F L G G+ Sbjct: 336 QPKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 368 >gi|322376872|ref|ZP_08051365.1| membrane protein [Streptococcus sp. M334] gi|321282679|gb|EFX59686.1| membrane protein [Streptococcus sp. M334] Length = 388 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKHKINR-VIAISIVFVIIAIFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQV----IVALIIVPFMLFYLLRDGKGLRNYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|315031394|gb|EFT43326.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315166844|gb|EFU10861.1| conserved hypothetical protein [Enterococcus faecalis TX1341] Length = 390 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 49 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 108 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 161 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 162 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLG 221 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 222 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 281 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 282 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 341 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +K + + +N Sbjct: 342 LGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 375 >gi|119775046|ref|YP_927786.1| hypothetical protein Sama_1911 [Shewanella amazonensis SB2B] gi|119767546|gb|ABM00117.1| protein of unknown function UPF0118 [Shewanella amazonensis SB2B] Length = 372 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 122/348 (35%), Gaps = 17/348 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-----WPIYSSFISKKEESSTFLAVIAT 67 + + + IL L+ L F +L+ L++ WP+ +S+ + T A + Sbjct: 17 QAVTLLFILFGLWALIYFAGGLLAPLLVALVLAFLLEWPVAQ--MSRIGVNRTTGASLML 74 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + ++ + L + L++++ G+ L+ ++E Sbjct: 75 VLFAGIVLLMVFGLVPSLWKQGMSLLTELPAMLDKGMGYLEELTQKYPQYVSAE------ 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ + L T + I + F L + I + + +FFF +D + + Sbjct: 129 -QVIAMETELKRMLDTQHLLDIGKQILGFSASLLVLMVYTILVPLLVFFFLKDKEELIRG 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +K+ + + I + G I I G V + G+ LGV+ Sbjct: 188 SKRFFPS-NRELARKVWGEMNQQIFNYIRGKVIEIIIVGAVSYVFFAFMGLRYSALLGVL 246 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPI 305 T + +IP GA + +++ + + G + +D L P L + Sbjct: 247 TGLSVLIPYVGATLVTLPIALVGFFQWGFSPEFGYLMLGYGIIQALDGNVLVPVLFSDAV 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + ++ G G+F L +L+ + +K Sbjct: 307 DLHPVIIIAAVLVFGGLWGFWGVFFAIPLASLVKAVVNVWPRNHTSDK 354 >gi|187920328|ref|YP_001889359.1| hypothetical protein Bphyt_5642 [Burkholderia phytofirmans PsJN] gi|187718766|gb|ACD19989.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 361 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 132/342 (38%), Gaps = 18/342 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + +++ ++ +Y V+ A+ + +P+ + +A Sbjct: 6 VRTARQVWTALLIALLFFCIYMASSTLLVVVFAVFFSYLIYPMVDLVERIRPRRMPRVAS 65 Query: 65 IATVSVMCLFIVPL--LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 IA V V+ + ++ + E L++++ + +P + IP + L Sbjct: 66 IALVFVVVVAVIAVVGSIFGVQLQDEATHLLAQLPQLMKSDVP-----NRIPLPHFLEPL 120 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYR 179 + + + G D A G+ + ++I+++ I F + Sbjct: 121 RERIVDFVRGQI--------ETGSDKAVPMARSVGLGVMHAASNLIYLVLIPILSFLLIK 172 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + + L W +I + ++ + +++ + G A+ L GVP Sbjct: 173 EGPQMREDFLDLLNDRHRTLWAEIVTDLNVLLSKYVRALLFLSLATLICYGMAFSLLGVP 232 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V ++ +P P+ A+++ + + + L ++ A+ D L P+ Sbjct: 233 YAFLLAVSAGLLEFVPFAGPLGAVAITLVVAVFSGYPHLLWLVIFIALYRLFQDYVLNPY 292 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ +++ GL+ G + G+ G+F+ ++A++ +I Sbjct: 293 LMSEGVEVSPFLVIVGLLAGDQLGGVAGIFLAVPVIAMLKII 334 >gi|125624776|ref|YP_001033259.1| putative permease [Lactococcus lactis subsp. cremoris MG1363] gi|124493584|emb|CAL98569.1| putative permease [Lactococcus lactis subsp. cremoris MG1363] gi|300071576|gb|ADJ60976.1| putative permease [Lactococcus lactis subsp. cremoris NZ9000] Length = 371 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 115/345 (33%), Gaps = 15/345 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + +++F++ + + F P + A + + P+ + K + F Sbjct: 13 EILAVTLLIFLLTQIQFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLKIKKVF 72 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + ++ + I + + + ++ L++ + + W+ + S Sbjct: 73 GIFIVLILILGMIIFAVASVIPSLITQLTSLIN---ATGKAYPQIRTWIEGLQHNPRFSH 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFY 178 ++ + +SL + + G I I+ MI I L++ Sbjct: 130 IYEQL--DIKSLVERLNLSYTDILHNLLNSITISVGSIVSIITSIIMVMILVPILLYYML 187 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG I L ++ + I G+ + A+ +V+ Y + G+ Sbjct: 188 KDGEKIIPFLKENVLTEDKLNIFELLENMNHTISRYISGVALDALLVFIVVFVGYMVLGI 247 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IP P + + A + + + + P Sbjct: 248 PYAFLFALFAGVTNLIPYAGPYIGVLPMVVTVAFNRPITALIAVTYVLVLQQLDGNLVYP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +VG +K+ + ++ G+LG+ I L+ I K Sbjct: 308 KIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVK 352 >gi|89902219|ref|YP_524690.1| hypothetical protein Rfer_3452 [Rhodoferax ferrireducens T118] gi|89346956|gb|ABD71159.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 394 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 110/342 (32%), Gaps = 20/342 (5%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ L S++ L+ F PVL L+ + P+ + + AV+ + Sbjct: 42 LVVIATLASVFALRWAGAVFIPVLVGLLFSYALSPVVDWLQLLRIPRALSAAVL-----I 96 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS--------ELW 123 + + Y + +LV + A Q R L P + E Sbjct: 97 LGILSGIGAGAYSLSDDASKLVELLPAAAQKLHDSVRSLPGKPNNTLTTVQRAAAQIEQA 156 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + I M L I + + FF G Sbjct: 157 ADESTQAAPVSRSVQRVQIEKPKFNIKDHLWSGTMGLLGMLGQIGMVALITFFLMASGDQ 216 Query: 184 ISQQLDSLGEHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++L L + + + I+ L +I GL ++ G+ Sbjct: 217 FRRKLIKLTGPTLSKKKVTLQALNQIHDQIQRYMLVQLFTSILVGLATWLSFLAIGLEHA 276 Query: 242 VALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 GV ++ +IP G I+ + + L G + A + + I L P+ Sbjct: 277 AVWGVAAGVLDLIPYVGSVAIATGSALVSFLQFGTLEMALIVSGTSLVIHSIEAFLLTPW 336 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L K+ + F G++ G+ GL +G ++ +I I Sbjct: 337 LTSRTNKMNPVAIFVGVLAWGWLWGIWGLLLGVPILVVIKAI 378 >gi|317503774|ref|ZP_07961786.1| membrane protein [Prevotella salivae DSM 15606] gi|315665071|gb|EFV04726.1| membrane protein [Prevotella salivae DSM 15606] Length = 368 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 119/334 (35%), Gaps = 13/334 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY-GMLEM 89 P A +I + +PI + ++++ T ++ I + +L + + + Sbjct: 34 LLPFFIAWLIAYLLYPIVQFIEKRLHIHVRAISIVLTFLLLIGVIGGVCYLIFPPMIAQF 93 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L ++ H + I + A++ + + +T + F+ Sbjct: 94 DRLQDVLMRWVHHTTHTNDITNYISEWVQANQNQIERFFKSKDFGDAIKTAMPQV-FSFV 152 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + AS I ++ FF D ++ + +W+++ + V Sbjct: 153 SQTASIIWSIVAS-----AITLLYTFFILMDYEYLTANWIRIFPKKNRPFWQELMQDVKH 207 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + + G ++A+ G++ + + G P + LG++ I+ ++P + + Sbjct: 208 ELNNYVRGQGLVALCLGIMFCIGFTIIGFPMAIGLGILIGILDLVPYLHTFALIPTAFLA 267 Query: 270 LI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ G F L A+ I D + P ++G + L L + Sbjct: 268 MLKAADTGQNFWVIFGLALLVFAVVQVITDFIVTPKVMGKAMGLNPAILLLSLSVWGALL 327 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G +GL + L LI W+ + + ++K + Sbjct: 328 GFIGLIVALPLTTLIIAYWQRYVTKEDQGQDKPN 361 >gi|311032867|ref|ZP_07710957.1| hypothetical protein Bm3-1_20404 [Bacillus sp. m3-13] Length = 366 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 107/306 (34%), Gaps = 12/306 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI + FAP++ A ++ + P+ + +A +S+ +F Sbjct: 25 LVDFIFTPLTVMISTLFAPIILAGVMYYLLRPLVNLADRYIPR------ALAILSIYLMF 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I + L + L +V ++ + + D + +E + + Sbjct: 79 IGLITLLLFLI---GPTLQQQVNSLVKNTPEIINDIRDYTIELQENEYIARFQQDERFSL 135 Query: 135 ILSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + N ++ F S + + ++ + LF+ +DG + Q+ Sbjct: 136 EEISGKIADNLNAYVTAFGSNVVNVISAITGFLILLVVIPFVLFYMLKDGERLPDQVLKF 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + + S G I+++ G+++ + + G+ + L +I Sbjct: 196 IPRQHEREGRNVLKDMDIALSSYIQGQIIVSVFVGVLIYIGFLIIGLEYSLVLALIAMFT 255 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P T S+ + A + L I I + P ++G + + L Sbjct: 256 NVIPFIGPFIGTIPSVIVAFFDRPIMALWVLLVVVIVQQIESNFISPQVMGKKLDVHPLT 315 Query: 312 TFFGLV 317 L+ Sbjct: 316 IILLLL 321 >gi|312793513|ref|YP_004026436.1| hypothetical protein Calkr_1317 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312875972|ref|ZP_07735961.1| protein of unknown function UPF0118 [Caldicellulosiruptor lactoaceticus 6A] gi|311797170|gb|EFR13510.1| protein of unknown function UPF0118 [Caldicellulosiruptor lactoaceticus 6A] gi|312180653|gb|ADQ40823.1| protein of unknown function UPF0118 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 351 Score = 85.3 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 121/360 (33%), Gaps = 18/360 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL------KGFFAPVLSALIIGFTSWPIYSSFISK 54 M L + + + M +I + +YF P L AL + + P K Sbjct: 1 MHIIKLVKKYLTDILFMTLIAIVIYFFVNIKAFWPILIPFLIALFLSYLLKPCVDFLEKK 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI- 113 +I+ + + I+ ++ + E K+L+ V P +++ I Sbjct: 61 VRSRD-ISILISFAIIFGITIMVFVYFIPLFVSETKQLIQNV----------PEYIALIQ 109 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 L+ + + + L + + I Sbjct: 110 KWFFEIDSKLLNKLNIDIKEILNANSINIEGISKQTLSIFLNIVKSISSNILYYLLIPII 169 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F+ RD + + L + I + +V+ G + A G++ + Sbjct: 170 SFYILRDWKRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAFIVGMLSFIGF 229 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + V LGVIT I +IP PI + ++ + + + A + ++ + + Sbjct: 230 SILSVRYAALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDS 289 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 290 FIISPRVIGSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|225016793|ref|ZP_03705985.1| hypothetical protein CLOSTMETH_00705 [Clostridium methylpentosum DSM 5476] gi|224950461|gb|EEG31670.1| hypothetical protein CLOSTMETH_00705 [Clostridium methylpentosum DSM 5476] Length = 405 Score = 85.3 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 125/340 (36%), Gaps = 10/340 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVP 77 I + + AP +I F + KK + ++SV+ ++ Sbjct: 32 IASAFGTITSLLAPFFYGAVIAFLLYLPSRKLEGLIKKTNNKFLQKRARSISVLSALVLF 91 Query: 78 LLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L +L + + +V AN + + I ++ + L + QS Sbjct: 92 IALLAVLLLLFIPGMYKNIVSFANSIPGYLNDAYNFITQYAEGADWLSNILKNIQSQLTF 151 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG---- 192 D I +A F+ +++ II + D SI + L+ + Sbjct: 152 DNIMGWVQAAD-IGTYAKGI-TSFIGVVVNLFLGIILSIYMLIDRASIKRNLNRVVVLAL 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + V+ S G + A+ G+V G + VP+ LG+I + + Sbjct: 210 KPRRAKNLGALLSRIADVLYSFLYGQALDALFVGIVTGIILAVIQVPNAAVLGLIYGLFS 269 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP GA V + + G F+ I +I + P ++G I + L Sbjct: 270 LIPYFGAMFGVLTVCLLTFLSGGFTKLILAFVLITILQWIDGNIINPKIIGNAIGIKPLY 329 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 FG+ G++G+ IGP LMA+I + +E + + Sbjct: 330 VIFGVTLFGGLFGIVGMLIGPPLMAIIIELVQEFVGDRER 369 >gi|327331068|gb|EGE72808.1| putative permease [Propionibacterium acnes HL097PA1] Length = 386 Score = 85.3 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 125/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P + ++L T + ++ S+ I Sbjct: 123 LGDQSVASFKQAL---QWLAKSPLHINEAQL-THLMQKAEAAMAGSQ--------GRIAS 170 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 171 TAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 231 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 291 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 351 AIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|256822848|ref|YP_003146811.1| hypothetical protein Kkor_1631 [Kangiella koreensis DSM 16069] gi|256796387|gb|ACV27043.1| protein of unknown function UPF0118 [Kangiella koreensis DSM 16069] Length = 376 Score = 85.3 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 120/338 (35%), Gaps = 12/338 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +P I+ M++ + + + AP+L AL+ + + S + +K + ++ Sbjct: 15 SPATIVLSMLLIVGFFIILTVGDILAPILWALVFAYLLESV-VSVLRRKGVPRIWAVLLV 73 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L ++ + L + +LV+++ L + ++E + Sbjct: 74 FAGFIGLVLIVVFGLIPLVWEQGAKLVAELPNIMTKVRESILELPEKYPNFVSTEQVSAF 133 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ S + + + + A+ + II + + +FFF +D I Sbjct: 134 FANLNSELAKWGEAILSASVSSLMSVAT--------VMVYIILVPLLVFFFLKDRRQIIS 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + V + I + G + + G A+ + G+ + LGV Sbjct: 186 WCTQWLPQ-ERHLAEAVWSEVNQQIGNYIRGKVLEIVIVGTASYIAFLIMGLNYALLLGV 244 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGP 304 + +IP GA + V++ + + + + + + I+D L P + Sbjct: 245 CVGLSVLIPYIGAALVTIPVALIAFFQWGFTHDFYILIVVYLIIQILDGNLLVPLIFSEA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + ++ G G+F L L+ + Sbjct: 305 VNLHPVAIIGSILLFGGLWGFWGVFFAIPLAILVNAVL 342 >gi|116334148|ref|YP_795675.1| permease [Lactobacillus brevis ATCC 367] gi|116099495|gb|ABJ64644.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 380 Score = 85.3 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 110/323 (34%), Gaps = 16/323 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----SSTFLAVIATVSVMCLFIVPLLFL 81 FL F P+L + ++ + P+ + + + T I + ++ + + ++L Sbjct: 39 FLSTIFIPLLLSGVLFYLLNPVVKLLEKIRWKKFHVNRTGAVAIVFLLLIGILVAGGVWL 98 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ LV + + V L P +++ + L + F Sbjct: 99 IPRLVNQVSTLVGSIPDFAKSSEAVLAKLMKHP--------LLQNVDFSKYLNQIQSAFA 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMII---ALFFFYRDGFSISQQLDSLGEHLFPA 198 K F+ + G + + I LF+ +DG + Sbjct: 151 KY-AEGFMSGLTTGIGAVIGTVTTVTVTAITVPVMLFYMLKDGERFMPAVQRWLPAKHAD 209 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + I G + + G Y L G+ + LGV + + +IP Sbjct: 210 QTVELLSRMNQTIARYVGGQIVECLFVGTFTAIGYMLFGLKYALLLGVFSGLCNLIPYVG 269 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + + + + + P ++G +++ L L+ Sbjct: 270 PYIGILPALIVAFTISTNMVLYVVIVVVVVQQVDGNLVYPNIIGRSLQIHPLTIIIILLA 329 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 GL+G+ + L A++ + Sbjct: 330 AGNIAGLMGMILAIPLYAVVKTV 352 >gi|307700600|ref|ZP_07637632.1| putative membrane protein [Mobiluncus mulieris FB024-16] gi|307614245|gb|EFN93482.1| putative membrane protein [Mobiluncus mulieris FB024-16] Length = 458 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 98/294 (33%), Gaps = 11/294 (3%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + ++ AV V + L ++ + V A + W Sbjct: 138 RLQKWRFPNALSAAVSLIVGISAL----TAAIWVSVSQLASGAPALVRKAGGGFGKLMAW 193 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 LSD P G+ + ++ + + L L E + + A L+ +I Sbjct: 194 LSDEPLGLNSEDIDHYTKALSRQLGGLLEKYSSSIAS-----SAWSVTSSVLNLVAAIFI 248 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + LFFF +DG I L F + ++ ++A + + + Sbjct: 249 SVFCLFFFLKDGRRIWVWFMRLLPVPFREPVHEAGIRGWITLKGYIKAQAMVAGVDAVFI 308 Query: 230 GSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAI 287 G S L ++ + + IP +S A+++ + L+ + A + + Sbjct: 309 SIGAAFLGAGSMTIPLALLIFLASFIPIVGAVSTGAIAVLVILLDQGLVKAIIMLVVILA 368 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L+P L+ + + L + G ++G + ++A + + Sbjct: 369 VQQIESNVLQPLLMSNAVNIHPLVVLLAITVGGYFASIIGALLAVPIVAFLNTV 422 >gi|254383382|ref|ZP_04998734.1| integral membrane protein [Streptomyces sp. Mg1] gi|194342279|gb|EDX23245.1| integral membrane protein [Streptomyces sp. Mg1] Length = 358 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 111/298 (37%), Gaps = 22/298 (7%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ + + S + A + ++V+ + + + ++VS +V A Q Sbjct: 60 PMHRRLV-RMGVSRSLAAALTCLAVVAVVGGATYVVVGALIDTGDQIVSALVRAGQD--- 115 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 +E + + Q L ++ L G + + + Sbjct: 116 -------------LAEHFGAAGTSLQDLASNAKELLAKFGGTAASGVITGI-SVVGEMIA 161 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + I ++ +FFF RD I+ L +LG + ++R + G T +A+ + Sbjct: 162 TAILALVLIFFFLRDSHRIAGALRALGPRSAADTVEAMARRAFLAVEGFMRGTTFVALID 221 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + +A VP + LG + I A IP I AV++ L+ + L++ G Sbjct: 222 AVFITAALLALRVPGALGLGALVFITAYIPYLGAILSGAVAV-LVALADRGWVIGLWVLG 280 Query: 286 AI--ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 + + L+P + +++ + G G+LG+ + P+ A V Sbjct: 281 VVLAVQMLEGYVLQPLIQSRTVQMHPAVVMLAITVGASVAGILGMLLAVPMTAAAFGV 338 >gi|284043193|ref|YP_003393533.1| hypothetical protein Cwoe_1731 [Conexibacter woesei DSM 14684] gi|283947414|gb|ADB50158.1| protein of unknown function UPF0118 [Conexibacter woesei DSM 14684] Length = 373 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 115/339 (33%), Gaps = 17/339 (5%) Query: 20 ILVSLYFLKGFFAPVLSALI---IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I++ LY + P+ A I + + F F + + V+ + + Sbjct: 24 IVLGLYLMYLLRKPLGWAAIACFVAVALSGPVAWFSRWM--KRGFAITVTLLLVLLVPVA 81 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + E LV KV P + + + +E T+ + + Sbjct: 82 VMAIVIPPLVREGTHLVEKV----------PDYAREFDDYVNNNEKLTRLNEEYDITRKV 131 Query: 137 SETFLK-TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I + G+ F++ + + + I F G + L S Sbjct: 132 QDWANDLPSRIGDAAQLLGDVGVGFVNSIFAAVTIFIMTAFILGSGPRWVRMLLSFQPPD 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + + G + A+ G+ + G+P L V TA+ +IP Sbjct: 192 RQRRFAMTLERMSQAVGAYVAGALLQALIAGITTFIVLTILGIPFAAPLAVATALFDLIP 251 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 GA I V I + + +W + + + ++P + + + F Sbjct: 252 MVGATIGAVIVGIVTVFADFPLDTIIWVIWAIVYQQVENNLIQPRIQNRAVGIHPFGVIF 311 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G +G+ G + + A + ++ K+ E + Sbjct: 312 AVLCGGTLLGIPGAILAVPVAASLQILAKDLWQWRAERR 350 >gi|222150988|ref|YP_002560141.1| hypothetical protein MCCL_0738 [Macrococcus caseolyticus JCSC5402] gi|222120110|dbj|BAH17445.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 349 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 115/333 (34%), Gaps = 6/333 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + I+ + I L+ YF+ P++ ALI+ P + + +K ++ Sbjct: 1 MFKRLMTKRNIVFLAVAVIALLFFYFIVPISIPLIVALILALMIEP-FVKLLEQKVKNRK 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I S++ ++ + + + + + + + M Sbjct: 60 WSVTIVYTSILSFILLCMYLFLTKLIQHIIQFSKDLPDKMNNILNAWTIFEARLAKMIPE 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q + F + + +S + ++ALF F + Sbjct: 120 SVSNALFDETQKFLFNLRDAILNY---FNAERITNLVASLPETFISGLVFLVALFLFMLE 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + I + V + I++ L + Sbjct: 177 IPNMHTFVRKHTYDKTYEKAMYIWKRVSSSVFGMLRAAFILSGITWLFTFIGLLFITPKN 236 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L I ++ ++P GA ++Y I G+ A L L L + K L P Sbjct: 237 ALVLSFIICLVDLLPILGATGVTIPWALYAYITGDPSLAVKLILLSVFLL-VQRKVLEPK 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 ++G + L LPT + G++ MG +G FIGP Sbjct: 296 VMGKGVGLSPLPTLIAMFIGLKLMGFIGFFIGP 328 >gi|154506026|ref|ZP_02042764.1| hypothetical protein RUMGNA_03568 [Ruminococcus gnavus ATCC 29149] gi|153793525|gb|EDN75945.1| hypothetical protein RUMGNA_03568 [Ruminococcus gnavus ATCC 29149] Length = 385 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 110/337 (32%), Gaps = 8/337 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M Q + M + + L GF P + II + P+ + + + Sbjct: 1 MERKRPYWQVAVSLMFSILATAAFIILGVKAIGFLMPFVVGWIISAIATPLVNWLEKRLK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + V+ L ++ F E+ +L+ R + + G Sbjct: 61 IVKKLGTAMIVIMVIGLIVLVGYFAVSRIAAEVTDLIQNFPDIYAQLEEGMREIGNTLSG 120 Query: 117 MWASELWTKHLSHPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++ ++ L L + + A F Y +S I I+A Sbjct: 121 AFSRLPRGVQNGWTTIVENLDTYMGNLVSKISEPTVTAAGNFAKRLPSYLISFIVAILAA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +FF + + + + + F I L+L + + Sbjct: 181 YFFTIQREEVIAWFHKIAPPSVEKRMILVMDNLKYAVGGYFKAQFKIMGVVFLILFAGFL 240 Query: 235 LAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G+ V + + + + +P G + +IY + G L + A+ +V Sbjct: 241 VLGIHYAVLVAFLISFLDFLPFFGTGTALIQWAIYSVFIGEYKITAGLVIIYAVSQ-VVR 299 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L+P LVG + + L T L G + G+ G+ + Sbjct: 300 QLLQPKLVGDSMGMNPLVTLLLLYVGYKIKGVFGMIL 336 >gi|205374541|ref|ZP_03227337.1| hypothetical protein Bcoam_15781 [Bacillus coahuilensis m4-4] Length = 372 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 128/344 (37%), Gaps = 12/344 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + ++++Y++ + P + A+ + + PI + + ++ + Sbjct: 11 RAIFLAVLIVLSVIAVYYIGKYTYPFIIAIGLAYILNPIVNFLEKRTRLPRGLAVFVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR---WLSDIPGGMWASELWTK 125 ++ F + L + + L + + + + IP S ++ Sbjct: 71 LIVSAFAGLITLLIAEIVNGAEYLSNVLPTHIDSFVTYIEDFVAMQIIPIYEQLSVMFNS 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-------SIIFMIIALFFFY 178 + Q + S T + F RF + L ++F+ +A FF Sbjct: 131 LDTGQQDSIMDSIQNTGTAIATSMTDFIQRFFQALPNAVLWIPNTATVLVFIFLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + ++ + I + + K + + L++ + V Sbjct: 191 KDWERLLEKTIHILPIKAQSHSRTIVQDLKKALFGFIQAQLTLITFTTLIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + ++ ++ ++P G IY + G+I L + + I + + Sbjct: 251 EYAITIALVAGLVDLLPYLGTAAVIIPWMIYEFLTGDIRLGIGLAILYG-VVTIQRQLME 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P ++ I + L T L G + +G LGL +GPV + LI + Sbjct: 310 PKVLSSSIGIDPLATLVALFVGFKLVGFLGLILGPVTLVLITAL 353 >gi|326791068|ref|YP_004308889.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] gi|326541832|gb|ADZ83691.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] Length = 357 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 116/332 (34%), Gaps = 5/332 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++I+ ++ + L + F AP +SA +I F + + + T +A+ + + Sbjct: 17 FIIIGMVFIVLKYGLPFIAPFVSAFVIAFLLNKPITFLAKRCHVNRTLIAIAIVLVFYSI 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + +KEL S + I + S++ L Sbjct: 77 IGILFALLGIRLFVFVKELFSYLPNLYATEIQPFLMQLFDSLEHYISKMDVSLLPAMNEF 136 Query: 134 KILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L F + + + I+F II+ FF D I+ L Sbjct: 137 SSNVVQSLGELISSFSMKMIGAISNYASSLPGFFIRILFTIISTFFLVIDYKKITAFLLH 196 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + +I V + L +I L + + + V + + +I Sbjct: 197 QLKDKHQKLMIEIKDYVVNTLFKCILSYALIMCITFAELSVGLSIIRIENAVLIAFVISI 256 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++P G +I ++GN A L + I I L P +VG + L Sbjct: 257 FDILPVLGTGGIMIPWTIIAALQGNYSLALGLLIVYIIITIIR-NILEPKIVGSQVGLHP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T L G + G+LGLF P+ ++L+ + Sbjct: 316 LVTLMSLFVGAQLFGVLGLFGLPITLSLLKNL 347 >gi|262283223|ref|ZP_06060990.1| membrane protein [Streptococcus sp. 2_1_36FAA] gi|262261475|gb|EEY80174.1| membrane protein [Streptococcus sp. 2_1_36FAA] Length = 374 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 111/329 (33%), Gaps = 6/329 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L A + + + P+ + + ++ + ++ +++L Sbjct: 37 VVNTILIPFLIAGFLYYIANPLVVFLEKYLKLNRVLGVLLTLTILFGSIVLAVIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L + + V W++D+ L + +L + + N Sbjct: 97 VTQLTSL---INSSQNLYSYVYSWVNDLAQNPVFKNLNIQSTLQQLNLSYID---ILRNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ II I L +F DG + L+ + + Sbjct: 151 LNGVTNSLGSVVSAVINTIFIIIMTPIFLVYFLLDGHKLLPMLERSILKRDKLNISSLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G++I A+ G + Y G+ + + +++ +IP P Sbjct: 211 NLNATVSRYISGISIDAVIIGCLAYIGYSTIGIKYALVFAIFSSLANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MIISHAFTDPKRMLIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGI 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+ + ++I I K +KE Sbjct: 331 IGMIVAIPTYSIIKEIVKFLANLYDNHKE 359 >gi|223936487|ref|ZP_03628399.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223895005|gb|EEF61454.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 374 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 75/238 (31%) Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + IP + Q L + I A + + Sbjct: 110 NQIPTAIDKIRHHLAQYPWGQKLIEPITSDDILPRARTILGQAKGIFSVTFTAITGFFLI 169 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I + + L +++ V +++ +G + GLV G Sbjct: 170 IFIGLYLAMNARLHINGFIKLFPVNKRPRAREVLGDVGSLLQRWIIGQLVSMTIIGLVTG 229 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 GVP LG +T + IP P +S+ L + A + L F Sbjct: 230 IGLHFVGVPLAGILGFLTGFLDFIPLVGPFIAGTISVLLAFLMSPTKALYVLLLFVALQF 289 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L P + +LP + T +V G +G+ + ++A+I V+ K+ + Sbjct: 290 LESHLLIPIVQKKAAELPPVLTLIAMVLFGSLFGFMGVLLATPMLAVIMVLIKKLYIE 347 >gi|322388018|ref|ZP_08061625.1| membrane protein [Streptococcus infantis ATCC 700779] gi|321141291|gb|EFX36789.1| membrane protein [Streptococcus infantis ATCC 700779] Length = 366 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 113/338 (33%), Gaps = 8/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + + PI + + ++ + ++ Sbjct: 29 AIITPFVSVVNTIMIPFLLGGFLYYLTNPIVIFLEKECRINRIIGILLTLCVLFGTIVIA 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L++ + LS P + LS Sbjct: 89 VVYLLPILINQLSSLINSSQDIYSRIQDLVIELSKYPTFQELD------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALVSTVLIIIMTPVFLIYFLLDGHKFLPMLERTILKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 + + + I G++I A G + Y + G+ + + + + +IP Sbjct: 203 LNISGLITNLNETISRYISGVSIDAFIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYV 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I + I L + ++ I + L P +VGG +K+ + L Sbjct: 263 GPSIGLIPMIISNLFT-DPQKMIIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLL 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G++G+ + +++ I K + +++KE Sbjct: 322 LLSSNIYGVVGMIVAVPTYSILKEISKFLLRLYEKHKE 359 >gi|225868492|ref|YP_002744440.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701768|emb|CAW99160.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 384 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 106/295 (35%), Gaps = 5/295 (1%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + + + + + +L++ + Q + + G ++ Sbjct: 89 FCMLLAYFTFISLIVWIISIVIPDLIASISSLTQFDTRAIKEVISDLGHNKLIARAINYI 148 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSIS 185 L + + FI + ++++ + + + Sbjct: 149 GGDAKLTETITNYSQQLLKQFIGVLTGILTSVTAVASAIINVVISFVFSLYVLASKEELC 208 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 QQ +L + Y K + ++ R F+ T+ A+ G + ++ +P Sbjct: 209 QQATTLIDTYTGKYAKTVHYLVSLLHSRFRGFFVSQTLEAMILGSLTAIGMFILQLPFAG 268 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +GV+ A A+IP A+ L++ ++ A ++ I I + P +VG Sbjct: 269 TIGVLVAFTALIPVVGASIGAAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIYPRVVG 328 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G I LP + + G G++G+ + L A + + K+ I + +++ S Sbjct: 329 GSIGLPAMWVLMAITIGAALKGIVGMIVAVPLAATLYQVIKDHIHKKQALQDRQS 383 >gi|257875480|ref|ZP_05655133.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257809646|gb|EEV38466.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 412 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 114/334 (34%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + + F ++ + ++ I+ + + Sbjct: 81 FFSTLFAPVLIAGFLYYLLNPIVLFLMKTTKIKRLFAVILVLLLLVAAIILIFVSVIPNL 140 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L + ++ ++D P ++ LS L Sbjct: 141 VSQITSLAENIPTFAKNMESWISRIADDPFFKQID------IAQQLENLNLSYGSLLQQF 194 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + I+ + LF+ +DG + L ++ + Sbjct: 195 LSGLSTSLGSIVSTIASATMIIVTVPFILFYMLKDGEKLVPNLKTVFPERRREQIVGLLG 254 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I I YW+ GV GVI + +IP P Sbjct: 255 DLNKTLSNYISGQAIECIFVATFTFIGYWMIGVNYAFLFGVIAGVTNLIPYLGPYLGLIP 314 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + F A + + + + P ++G + + L L+ GL Sbjct: 315 AVLVTVFDEPFRALLCCVVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLLVAGNLAGL 374 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I + IK++K K + Sbjct: 375 LGIFLGVPFYAICRTIVVFIVRLIKDDKIKKNQE 408 >gi|207091774|ref|ZP_03239561.1| membrane protein [Helicobacter pylori HPKX_438_AG0C1] Length = 323 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 128/334 (38%), Gaps = 25/334 (7%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 L A ++ + + + +++ + + + IVPL F+ Y + E+ Sbjct: 4 LIAGLLCVGFFQVKVFLDKRFFN--IVSSLLCVLVLASVLIVPLYFIVYKSSNIIFEI-- 59 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + +WL +E + + E F + ++ + +S Sbjct: 60 ----NFEKFSALIKWLKG-----TITENLSHFPTIHDGASKFLENFSAASITGYLLKISS 110 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 G L +F++ LFFF+ G + + L KKI V ++R Sbjct: 111 YVGRYSLKLITDALFILGLLFFFFYYGERFYRYFLGVLP-LGINQSKKIFEEVAGILRIV 169 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKG 273 L I I EG+ G G LG++ + +++P G + + ++IY L G Sbjct: 170 LLTSLITVILEGVAFGVMIVWFGHDGWS-LGILYGLASLVPAVGGALIWIPIAIYELYHG 228 Query: 274 NIFNATCLFLWGAIELF-IVDKTLRPFLV--------GGPIKLPFLPTFFGLVGGVRTMG 324 N+ A + L+ + + ++D ++P L+ +K+ + FF ++ G+ G Sbjct: 229 NVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFG 288 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+ +GP + A + + +N +K Sbjct: 289 FWGIIVGPTITAFFIALLRLYENYFIQNDQKACE 322 >gi|261880587|ref|ZP_06007014.1| membrane protein [Prevotella bergensis DSM 17361] gi|270332706|gb|EFA43492.1| membrane protein [Prevotella bergensis DSM 17361] Length = 367 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 129/339 (38%), Gaps = 13/339 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + +L G P A + + +PI +K + L++I T+ ++ + Sbjct: 18 LLVIAVFYLFNYLSGALLPFAIAWLFAYLLYPIVRFIETKAKIRFRVLSIIITLLLVIVV 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I + +L M+E + + ++ + +S+ W SE +++ + + Sbjct: 78 IGLITYLIIPPMIEQFQKLYDILNNWVNQTTHSNGISE-----WISEWVSENQKQIEGVL 132 Query: 135 ILSE-TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + T + + + + + + S+I ++ +FF D ++ + Sbjct: 133 KSPDFTDAVKSAVPKVFNIVGQTASVVISVVASLIVLLY-MFFILLDYEYLAANWIRIFP 191 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +W+++ V + + + G ++A+ G++ + + P + LG++ I+ + Sbjct: 192 KKNRPFWQELMGDVARELNNYIRGQGLVALCMGIMFCIGFTIMDFPMAIGLGILIGILDL 251 Query: 254 IPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKL 307 +P ++ + ++ G F G + + D + P ++G + L Sbjct: 252 VPYLHTLALVPTAFLAMLKSADTGQNFWVVFGLAVGLFIVVQIICDMVVTPKIMGKVMGL 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L G +GL I L LI WK + Sbjct: 312 NPAILLLSLSVWGTIFGFIGLIIALPLTTLIIAYWKRYV 350 >gi|224025943|ref|ZP_03644309.1| hypothetical protein BACCOPRO_02689 [Bacteroides coprophilus DSM 18228] gi|224019179|gb|EEF77177.1| hypothetical protein BACCOPRO_02689 [Bacteroides coprophilus DSM 18228] Length = 376 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 132/350 (37%), Gaps = 17/350 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ ++ IL L L G P A +I + ++P+ + ++ S L+++A + Sbjct: 14 RGVLSGAVIIAILYLLNRLSGVLLPFFIAWLIAYLTYPMVIFYQNRLRLRSRVLSILAVM 73 Query: 69 SVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + F M+E +KEL+ ++ +++ +P +S+ Sbjct: 74 LTLVVLGGIAFSFFVPPMIEECAKLKELIEIYLIEDRNHAAIPETVSEFIRKNIDFNWLQ 133 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +++ + + + K + + ++ +I+ LFF D I Sbjct: 134 NNITTDNIVSAIQKLLPKVWTL-------LSTSYNIILAIFTLFIIILYLFFILLDYEQI 186 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +L + +++ + + F G ++A G++ + + P + L Sbjct: 187 ANGWITLLPKKYQGMALRLTTDIKTSMNRYFRGQALVAFCVGILFSIGFLIIDFPLAIGL 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKG-----NIFNATCL-FLWGAIELFIVDKTLRP 298 G+ ++ M+P I F + L+K + + L + A+ I D L P Sbjct: 247 GLFIGLLNMVPYLQIIGFIPTILLALLKAADTGESFWWTLGLALVVFAVVQAIQDMILVP 306 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++G L L MG+LG+ I L+ ++ I Sbjct: 307 KIMGKITGLNPAIVLLSLSIWGSLMGMLGMIIALPGTTLLLSYYQRYIRK 356 >gi|284167020|ref|YP_003405299.1| hypothetical protein Htur_3764 [Haloterrigena turkmenica DSM 5511] gi|284016675|gb|ADB62626.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 376 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 122/334 (36%), Gaps = 31/334 (9%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ + LV+ L ++ AL + + P+ + S AV AT+ Sbjct: 14 VLAGIVALLGLVTGVILLDVLGTIMFALTVAYVLLPVQGWLHRR-GLSEWLSAVAATLLG 72 Query: 71 MC---LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 PL+ Y+ +++ +V +V ++P + Sbjct: 73 FLGTVAVFAPLVVALYFRFEQVQTIVEEVPR-------------EVPVAV---------- 109 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +++ ++ + A F + ++ LF + + Sbjct: 110 --AGYTHTIDVAEVRSLALESLGDVAVSFAAALPVLAIKFALFVMVLFALLLKADAAGRA 167 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + H + ++ + + + ++ +I V +WL G + + Sbjct: 168 AIAPVPHGYRDVVYALATRARETLYAIYVLQFATSIATLAVAYPLFWLLGYDAAFTIAFF 227 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFLVGGPI 305 AI+ IP G + +++Y + G + + + G A+ ++ D +RP L Sbjct: 228 AAILQFIPMIGPSLLIAPIALYHVAVGELVAGLLVGVLGMALVAWLPDIAVRPRLARRSA 287 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 LP F G GG+ T+G +G+ +GP+++A+ Sbjct: 288 GLPGSLYFVGFTGGLFTLGAIGVVVGPLIVAVFV 321 >gi|313837035|gb|EFS74749.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314929378|gb|EFS93209.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314971539|gb|EFT15637.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] gi|328907912|gb|EGG27674.1| putative membrane protein [Propionibacterium sp. P08] Length = 344 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 122/329 (37%), Gaps = 14/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ +E Sbjct: 22 VPVAVALMLTAAMWPLANWL-SRHRIHRGIASGICLLLLIILVGGVFTLVGAQIALQWRE 80 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L ++ V + + + +WLS P ++L + + I Sbjct: 81 LGNQSVASFKQAL---QWLSRSPLHTNKAQL---------TDLMHKAETAMAGSQGRIAS 128 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + ++ + A FFF +G ++++ L A ++ + Sbjct: 129 TAAAAGTQIGRFSAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAKILDAAKRGWVAL 188 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 189 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVAVVL 248 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G + Sbjct: 249 VTLGFFKALIMLIVFVAVMQIEGHILQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALL 308 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K ++ + + Sbjct: 309 AIPIVAFGVAFIKALNPETPADEVPPNHD 337 >gi|157150736|ref|YP_001450934.1| membrane protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075530|gb|ABV10213.1| membrane protein [Streptococcus gordonii str. Challis substr. CH1] Length = 374 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 111/329 (33%), Gaps = 6/329 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L A + + + P+ + + ++ + ++ +++L Sbjct: 37 VVNTILIPFLIAGFLYYIANPLVVFLEKYLKLNRVLGVLLTLTILFGSIVLAVIYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L + + V W++D+ L + +L + + N Sbjct: 97 VTQLTSL---INSSQNLYSYVYSWVNDLAQNPVFKNLNIQSTLQQLNLSYID---ILRNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ II I L +F DG + L+ + + Sbjct: 151 LNGVTNSLGSVVSAVINTVFIIIMTPIFLVYFLLDGHKLLPMLERSILKRDKLNISSLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G++I A+ G + Y G+ + + +++ +IP P Sbjct: 211 NLNATVSRYISGISIDAVIIGCLAYIGYSTIGIKYALVFAIFSSLANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + ++ I I L P +VGG +K+ + L+ G+ Sbjct: 271 MIISHAFTDPKRMLIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLLSSNIYGI 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+ + ++I I K +KE Sbjct: 331 IGMIVAIPTYSIIKEIVKFLANLYDNHKE 359 >gi|154686617|ref|YP_001421778.1| hypothetical protein RBAM_021860 [Bacillus amyloliquefaciens FZB42] gi|154352468|gb|ABS74547.1| hypothetical membrane protein [Bacillus amyloliquefaciens FZB42] Length = 360 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 115/317 (36%), Gaps = 10/317 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I F+ + +K F P++ + ++ + P+ +K + + L Sbjct: 24 TLIDFLFQPVVITVKTLFPPIVLSGVLYYLCRPLVRLLHAKLKLPEGIAILAIYAGTAGL 83 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++ L + + + W+ + W L H S Sbjct: 84 FVLFLYTAGPAVQKQFTAFTDHIPELS---AKAENWIGHL-----QDSKWFSRLQHGDSF 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K L++ +G I S + ++ + AL++ ++G ++L L Sbjct: 136 KKLADKAANYSGS--IADSLSSLAGTAANAAITAAIIPFALYYMLKEGNKAPRRLLQLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K+I R + + + S G +++ G+++ Y++ G+ + LG + + Sbjct: 194 EKHQKEGKQILRDMDEALSSYIQGQLLVSFCVGVLVTIGYFIIGLDYPLVLGAFAMVTNL 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P T + + + + A + I + + + P ++G + + L Sbjct: 254 IPFIGPWIGTFPGVIVGLFDSPTEAVLVITVVVIVQQLESQLISPQIMGRKLDIHPLTII 313 Query: 314 FGLVGGVRTMGLLGLFI 330 F L+ + G+ G+ + Sbjct: 314 FLLLAAGKFSGIAGMLL 330 >gi|288553204|ref|YP_003425139.1| hypothetical protein BpOF4_00890 [Bacillus pseudofirmus OF4] gi|288544364|gb|ADC48247.1| hypothetical protein BpOF4_00890 [Bacillus pseudofirmus OF4] Length = 352 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 115/325 (35%), Gaps = 2/325 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + LV+ YF+ P+++AL+ P ++ K + ++ + + Sbjct: 16 ILLFLVAAYFILPVSLPLVAALLTALILTPAVNALQRKTKIKRNVAVMLVFTVFVVFIGL 75 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + ++V + + ++ Sbjct: 76 SGYYIATKAITQGTQIVENSPQYISDINRAWLNFQRNLEEKYENLPPELVQEINITVTNT 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + Y ++ + +IALF F + + ++L S Sbjct: 136 LSDLRSNISDRNLIQDITSLISSIPGYLVTFLVYLIALFLFMLELPRLREKLYSYLSERT 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++ + VI F +++I +V + + I ++ +P Sbjct: 196 KEKVNFMTSRLSYVIWGFFKAQFLVSIIIFIVTLIGLLFIAPEVALLMAFIIWLIDFVPI 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ + +I+ LI G++ + L + A L I+ +T+ P ++G I L L T Sbjct: 256 IGSIVILAPWAIFQLIVGDVSTGSKLLIL-AAVLLIIRRTVEPKVMGKHIGLSPLATLIA 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAV 340 + G+ G++G IGP+L+ Sbjct: 315 MYLGLMLFGVIGFIIGPLLVIAFTS 339 >gi|281423598|ref|ZP_06254511.1| putative membrane protein [Prevotella oris F0302] gi|281402418|gb|EFB33249.1| putative membrane protein [Prevotella oris F0302] Length = 368 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 126/338 (37%), Gaps = 17/338 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L FF A + +P+ +K ++++ T+ ++ I + +L Sbjct: 33 VLLPFFIAWFMA----YLLYPVVQFIENKLHIRVRAISILLTMLLVISVIGGVFYLIIPP 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE-TFLKTN 144 M+E + + V++ H L++ + SE + H + + + Sbjct: 89 MIEQFDKLQTVLMRWVHHTTHTNNLTN-----YISEWIQANQEHIERFFKSKDFGDTIKS 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F S+ + L S I ++ +FF D ++ + +W+++ Sbjct: 144 AMPKLFSFVSQTASVILSIIASAITLLY-MFFILLDYEYLTTNWIRIFPKKNRPFWQELL 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V + + + G ++A+ G++ + + G P + LG++ I+ ++P + Sbjct: 203 QDVKRELNNYVRGQGLVALCMGIMFCIGFTIIGFPMAIGLGILIGILDLVPYLHTFALIP 262 Query: 265 VSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + ++ G F L + I D + P ++G + L L Sbjct: 263 TAFLAMLKAADTGQNFWIVFGLALLVFIVVQAITDFIVTPKIMGKAMGLNPAILLLSLSI 322 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +G +GL I L L+ W+ I ++ + K Sbjct: 323 WGALLGFIGLIIALPLTTLLIAYWQRYITKEEQGQNKP 360 >gi|220930732|ref|YP_002507641.1| sporulation integral membrane protein YtvI [Clostridium cellulolyticum H10] gi|220001060|gb|ACL77661.1| sporulation integral membrane protein YtvI [Clostridium cellulolyticum H10] Length = 353 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 128/332 (38%), Gaps = 5/332 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ I +I +S+ +L FFAP + ALI+ + + P+ + K + S A I+ Sbjct: 12 KKILLILFIFALIYLSITYLLPFFAPFIIALIVSYINEPV-IKLLLKFKISRKSAAAISL 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + M + + E+ L + + L D + Sbjct: 71 LFTMSVLGFGITVGIIKIYNELTILQDNLTAYSSDISGKINGLIDKATLFYNGLPDQVTN 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++L+ SE I ++ + +I I+ +F D SIS Sbjct: 131 TITKNLESFSEQLGTMIAS--IIQYVINTVSSIPRLTVFVIVTILGTYFISSDRKSISSF 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + K + F + I+ L + + ++ V + +I Sbjct: 189 FYRQLPFSWRKNIVSLKKDTFKALIGYFKAILILMGFTFLEVSAGLFILNVKYAFLIALI 248 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G + ++ +I G++ A L + + + ++ + + P +VG I Sbjct: 249 VGLSDAIPIVGTGVVMVPWILWTIITGDMPLAFGLGIIYVLGI-LIRQIMEPKIVGSQIG 307 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L T + G++ G++G+F+GP+ + ++ Sbjct: 308 LHPLVTLLAMYIGLKFFGIIGMFVGPISIIVV 339 >gi|225027992|ref|ZP_03717184.1| hypothetical protein EUBHAL_02261 [Eubacterium hallii DSM 3353] gi|224954706|gb|EEG35915.1| hypothetical protein EUBHAL_02261 [Eubacterium hallii DSM 3353] Length = 382 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 129/342 (37%), Gaps = 12/342 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + I ++++ + L GFF P +++ I+ + P+ + + + + + + V Sbjct: 13 ETVIFFGIAVLLIIGIPKLMGFFWPFVASWILALLATPLCNFLEKHIKLNKKWSSAVIIV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKV----VLANQHGIPVPRWLSDI--PGGMWASEL 122 V+ E+ L S V + L++I P + Sbjct: 73 LVLLALAGIGYLAVTKLGRELMGLFSGAPEYYVYVQRTIKSFGDSLTNIVSPISSDFGKQ 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S G++ + A+ F + + MII+ +FF D Sbjct: 133 IQGFFTDFLSQMGGIINKFAPKGVEMMGSAAADLTNGF----IGTVVMIISAYFFIADRE 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++ + + + I V + L I ++L + ++L G P + Sbjct: 189 RLTEGFWRIVPEDLKSTVRDIKDKVIAALGGFLLAQFKIMCIVFVILLAGFFLMGNPYAL 248 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ + + ++P G +++ ++ + A L + + L + + L+P ++ Sbjct: 249 LLALVISFVDLLPILGTGTILIPWTLFCFVQRDYRQAMFLIILYVVCL-VARQFLQPKMI 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + T + G + G+ G+ + + +I +++ Sbjct: 308 ADSMGLDSMATLVLIYTGYKLNGMKGMILALLAGVIILSLYR 349 >gi|229586979|ref|YP_002845480.1| Permease PerM-like protein [Rickettsia africae ESF-5] gi|228022029|gb|ACP53737.1| Permease PerM-like protein [Rickettsia africae ESF-5] Length = 356 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 123/355 (34%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++N I + + + + + P A II + P SK + S+ Sbjct: 1 MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + I + + +F + L L ++ ++ + N + +P M Sbjct: 61 FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R+ +I ++ + + + I LF+F RD Sbjct: 116 YSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + SL +I + ++ + G I + A+ + G+ Sbjct: 176 WAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDL 235 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG++T + +IP + I L G + + + P Sbjct: 236 ALLLGILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIIGDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 350 >gi|187779547|ref|ZP_02996020.1| hypothetical protein CLOSPO_03143 [Clostridium sporogenes ATCC 15579] gi|187773172|gb|EDU36974.1| hypothetical protein CLOSPO_03143 [Clostridium sporogenes ATCC 15579] Length = 369 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 114/320 (35%), Gaps = 9/320 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P+ F +K + F +I + V+ L I+ + + + Sbjct: 48 LVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFINTFVPKIIKNIG 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + I +W +D ++ ++ ++ L +N + Sbjct: 108 DLFAHSPDYINQTI---QWFNDNIKYSKVYDMLMENSQISNNIPSLLNKI--SNLTNTFI 162 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRI 206 + F + + +F +I + D S+ + L L + Sbjct: 163 NTFLNTTIKFTSFLVKFVFGLIISIYLLLDKESLIENLKKFILALSGEKNYSKILSFFKE 222 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V +G +I ++ GL+ + + VP + I I MIP P + Sbjct: 223 VDMVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGPFIGMIPA 282 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + N A + ++ I L P ++G + L + F + G T G++ Sbjct: 283 FIITLFFNYIKAIWVLIFIVILQQFDGWYLGPKILGNQVGLSPIWIIFAITIGGGTFGVM 342 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ + A+I + + I Sbjct: 343 GMFLSVPIAAIIKIYLDKYI 362 >gi|268609433|ref|ZP_06143160.1| hypothetical protein RflaF_08041 [Ruminococcus flavefaciens FD-1] Length = 410 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 119/346 (34%), Gaps = 11/346 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPI----------YSSFISKKEESSTFLAVIATVS 69 +L + G+F+ V+ I + P+ F K +F +A + Sbjct: 35 VLGGIGTFIGYFSTVIGGAAIAYLMNPLAKLYEKKIFSKIKFFKKDTTKWSFSVGLAVTT 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ ++ ++ L + + VS + + + + L+ Sbjct: 95 VLLFLMMIIITLIPQLLESITNFVSNLGSYASSLLKLLNDFGLSFSESPNASGVQNLLNS 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + ++ N I ++ G +++ ++ I + L R + ++ Sbjct: 155 SEDIINTIVDYISDNSSKIISA-STSAGKGVVNWLVAFIISVYLLAAKDRLKTGAKRFMN 213 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + I + G L G+ + V+ Sbjct: 214 AAMKKDVYDSSLTFLTRCNDILNRYIIFDLIDGLIVGATNAVFMALFGMQYVGLVSVVVG 273 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P P+ + +++L+ ++A ++ + + ++P L G + Sbjct: 274 VTNLVPTFGPLVGGVIGVFILLMVKPWHAVIFLIFTLVLQTLDGYVIKPKLFGNTFGVSG 333 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L +V G + G+LG+ + A+ +++E ++ E K K Sbjct: 334 LLILLAIVIGGKMFGILGILLAIPFAAICDYVYREIVIPQLEKKRK 379 >gi|312874325|ref|ZP_07734356.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d] gi|325911463|ref|ZP_08173875.1| putative membrane protein [Lactobacillus iners UPII 143-D] gi|325913113|ref|ZP_08175483.1| putative membrane protein [Lactobacillus iners UPII 60-B] gi|311090091|gb|EFQ48504.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d] gi|325476813|gb|EGC79967.1| putative membrane protein [Lactobacillus iners UPII 143-D] gi|325477534|gb|EGC80676.1| putative membrane protein [Lactobacillus iners UPII 60-B] Length = 380 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 120/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFIVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIINTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ LFF +DG I+ L S Sbjct: 163 NT----GKASFNLFLENLFGAVNVISMLIVTLLTAPFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|317051128|ref|YP_004112244.1| hypothetical protein Selin_0950 [Desulfurispirillum indicum S5] gi|316946212|gb|ADU65688.1| protein of unknown function UPF0118 [Desulfurispirillum indicum S5] Length = 366 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 118/356 (33%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + NPQ + + + I + F+ P +A+II + + + T Sbjct: 10 DDHFSNPQVAILAIALIIGFSVVIFMGNILMPFFAAIIIAYLLDGLVQKLC-RLGIPHTP 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ V M F+ L + ++ +L ++ L G L +P Sbjct: 69 AAILVFVVFMGAFLFLLFAIVPMIARQLTQLAREMPLMINMGQQA---LMRLPEMYPEFI 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + F + + S + + +I + + +FFF +D Sbjct: 126 SQQQVRNYINLMTSEVGKFSQQILSWSLASVTSIIA-----FLVYLILVPLMVFFFLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q S P + V I S G + I + + + + G+ Sbjct: 181 EHLIQWFSSFLPENRPL-MNLVWSEVNIKIASYVRGKAMEIIIVWAISYATFAIMGLDFA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 + L ++ I +IP GA + ++ ++ G L + AI F L P Sbjct: 240 LLLAMLVGISVLIPYVGATVVTIPIAFIAYVQWGFTSQFAYLMIAYAIIQFFDGNILVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L LI I +++ Sbjct: 300 LFSEVVNLHPIAIVTSILVFGGLWGFWGIFFAIPLATLIQSIIGAWPNKEVIQEQE 355 >gi|229086022|ref|ZP_04218243.1| hypothetical protein bcere0022_26220 [Bacillus cereus Rock3-44] gi|228697232|gb|EEL49996.1| hypothetical protein bcere0022_26220 [Bacillus cereus Rock3-44] Length = 376 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + +K S + VM LF+ Sbjct: 44 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLERKGVSRIVSIASIYIFVMGLFV 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G + L+ + Sbjct: 103 FLVVTVIPIMKDQINALIDNLPYFGHEIERAARRF----GESNIIGKIQESLNIDVGSIV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T TN + + + F + L+ + + LF+ +DG + + Sbjct: 159 KDSTMNFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPKYFLRAISEQ 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K I + I S G I+++ G++L Y + G+ V L V+ I+ ++P Sbjct: 219 RQPAAKLILDDMHYAISSYIRGQIIVSLFIGIMLLIGYVIIGIKYAVLLAVLAMIVNVVP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + I K + P ++G + + + F Sbjct: 279 YVGPIIAIIPALIIAFIDSPAMIVKVIIVMMIVQLAEGKFISPQVMGKKLDIHPITIIFI 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 339 ILTAGNLFGMMGIILAIPGYAILKVL 364 >gi|306817796|ref|ZP_07451537.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|304649445|gb|EFM46729.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] Length = 458 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 11/294 (3%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + ++ AV V + L ++ + V A + W Sbjct: 138 RLQKWRFPNALSAAVSLIVGISAL----TAAIWVSVSQLASGAPALVRKAGGGFGKLMTW 193 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 LSD P G+ + ++ + + L L E + + A L+ +I Sbjct: 194 LSDEPLGLNSEDIDHYAKALSRQLGGLLEKYSSSIAS-----SAWSVTSSVLNLVAAIFI 248 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + LFFF +DG I L + ++ ++A + + + Sbjct: 249 SVFCLFFFLKDGRRIWVWFMRLLPVPLREPVHEAGIRGWITLKGYIKAQAMVAGVDAVFI 308 Query: 230 GSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAI 287 G S L ++ + + IP +S A+++ + L+ + A + + Sbjct: 309 SIGAAFLGAGSMTIPLALLIFLASFIPIVGAVSTGAIAVLVILLDQGLVKAIIMLVVILA 368 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L+P L+ + + L + G ++G + ++A + + Sbjct: 369 VQQIESNVLQPLLMSNAVNIHPLVVLLAITVGGYFASIIGALLAVPIVAFLNTV 422 >gi|288931196|ref|YP_003435256.1| hypothetical protein Ferp_0813 [Ferroglobus placidus DSM 10642] gi|288893444|gb|ADC64981.1| protein of unknown function UPF0118 [Ferroglobus placidus DSM 10642] Length = 330 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 120/332 (36%), Gaps = 19/332 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ + + + + + + + + S PI F K V++ + + Sbjct: 13 ILSVFITVILLISPLLDGIAMGVALAYASKPIMRKFERKLPL------VLSAFIATLIIV 66 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL F+F+YG+ + L +++ + + + + + + K + +L Sbjct: 67 LPLFFIFFYGLFQG--LYQLLLIFSDFQNFFEKIFTTLREFGVSEDYIQKLREYVPTLYS 124 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F+ + L+ I F+ DG ++L S Sbjct: 125 FV--------SQKFSVSVVSLTAKFIMFLLNFFLSSIVCFYALLDGDRFVRKLLSALPEE 176 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + V + + G + AI + + +P L + + A+IP Sbjct: 177 NRKIASEFFEEVDSIFTGLWFGNLVFAIIIAFISLPFFIAFNIPYTPLLVGLMFLAAIIP 236 Query: 256 GGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTF 313 A + V+IYL ++++A + G + L+I+ + +RP VG K+ L Sbjct: 237 IFAEWMVIAPVAIYLF-TVDVYSAIYFTVIGVVFLYIIPELFIRPQFVGYASKIHPLVLL 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG G+ G FI P+L + I+ Sbjct: 296 LSFIGGGLFGGIAGFFIAPMLAGIATAIYNHF 327 >gi|295699526|ref|YP_003607419.1| hypothetical protein BC1002_3896 [Burkholderia sp. CCGE1002] gi|295438739|gb|ADG17908.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 688 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 113/352 (32%), Gaps = 25/352 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ +++ I + LYF P+ A+++ F P+ + K +V A V Sbjct: 26 EGLVTFVVAVIAVACLYFASAVMIPITLAILLSFLVAPLADALCRLKLGH--VASVCAAV 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-------------SDIPG 115 + I L + + ++ + + QH + L + Sbjct: 84 LISVSVIALLCAVIATQLTDLAAGMPRYQATIQHKLDTVHSLTIGKLNRFASEAGQALQR 143 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR---FASRFGMIFLDYCLSIIFMII 172 + + T + + +P A R + + + + Sbjct: 144 ATIEPPQLRAPNGAAAATSPQASTAVPVEVREPVPTPFELARRVLSPAISPLETAFIVFV 203 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + + L + + + F+ + G G+V+G+ Sbjct: 204 VTIVILLQRDDLRDRAIRLFGSRDLHRTTTVMDETARRLSRYFVSQLGVNTGVGVVIGAG 263 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L GVPS + G++ A++ ++P + A + + + + +W + + Sbjct: 264 LLLIGVPSPILWGILAALLRLVPYVG--IWIAAILPTALAAAVSPGWEMAIWSLVLFVVA 321 Query: 293 D----KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + + + P L G L + G +GL + P+ + L+ Sbjct: 322 ELAVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLV 373 >gi|307329219|ref|ZP_07608384.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306885118|gb|EFN16139.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 401 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 117/348 (33%), Gaps = 22/348 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLK--------GFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M++ + LV+ Y L G +L A + P ++ Sbjct: 33 PRWLPRAMVLALALVACYRLATWAFDRLTGLLLNILIAFFLALAIEPAVDRMAAR-GMRR 91 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++++ L ++ +V + V RW++D + Sbjct: 92 GLATGLVFLAILIGTAGFFTLLGSMLADQIITMVQDFPQYLDN---VVRWINDTFHTHLS 148 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L H L ++++K + + + A G +F +++ F+F Sbjct: 149 RLEIQDSLVHSDWL----QSYVKNSADNVLDVSAQVLGGLFKVLTVTLF-----AFYFAA 199 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ + I ++A+ G+ GVP Sbjct: 200 DGPRLRRALCSVLPPTRQVEVLRAWEIAVAKTGGYIYSRGLMALISGVAHYILLEALGVP 259 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + + A + ++ I + L+P Sbjct: 260 YAPALAVWVGLISQFIPTIGTYLAGALPMLIAFTIDPWYALWVLVFVVIYQQFENYLLQP 319 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + + +F ++ G +G +G I A + I Sbjct: 320 RITARTVDIHPAVSFGSVIAGTALLGAVGALIAIPATATLQAFLGAYI 367 >gi|325955134|ref|YP_004238794.1| hypothetical protein Weevi_1516 [Weeksella virosa DSM 16922] gi|323437752|gb|ADX68216.1| protein of unknown function UPF0118 [Weeksella virosa DSM 16922] Length = 417 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 119/338 (35%), Gaps = 18/338 (5%) Query: 11 IMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +++ + + LV+L+++ K P++ ++ PI + K ++++ Sbjct: 27 VVKLACVLVSLVTLFYISIVGKSIIVPLIIGFLLSMVLLPIANFLERKLRFPRIVSSLLS 86 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + L + EL +++++ + + Sbjct: 87 PIMFVLVVLGVMFLLGTQIVQFQNELPELQKQLIDLFHKTQQFIAE-----QFNVTEQEQ 141 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L++ + + D + + G S+ + FF +++ Sbjct: 142 LNYLKKNTESTIKHGGAVVGDVVSTMTTVIGS-------SVFVFLYTFFFLLYRSH-LTK 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + +I+ +G+ I + L +A+ + G+ Sbjct: 194 FIVWCFPPSEQKKVRNVVSSIQSIIKQYIVGLGIQITFITVALFTAFSIIGIKYAFFFAA 253 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP G + ++ L NA + + + I L P ++G + Sbjct: 254 LCGLLNLIPYIGIFSATVLATLVTLATNEPINALWVVISVIVVNSIDGNILTPKVIGSKV 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L FG++ G+ G+F+ ++A+ +++ Sbjct: 314 SLNSFVVLFGIIVAESIWGMAGMFLAIPILAIARIVFD 351 >gi|322385892|ref|ZP_08059534.1| membrane protein [Streptococcus cristatus ATCC 51100] gi|321270071|gb|EFX52989.1| membrane protein [Streptococcus cristatus ATCC 51100] Length = 387 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 112/335 (33%), Gaps = 8/335 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P + + + + P+ + K + + F +I + + L V +++L Sbjct: 50 VINTILIPFVMGGFLYYITNPLVTLLEKKLKINRIFGILITLLLLFGLVTVGVIYLLPIL 109 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L++ LS P ++ LS + N Sbjct: 110 INQLSSLINSTQNLYWEIQSFVNQLSKNPLFKSL------NIQSTIQQLNLSYVDILQNI 163 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + ++ + +I I L +F DG + L+ + Sbjct: 164 LNSVTNSLGSVVSAVINTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISTLLT 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + G++I A+ G + Y + G+ + + +A+ +IP G I Sbjct: 224 NLNATVARYISGISIDALLIGTLAYIGYSVIGLKYALVFAIFSALANLIPYVGPSIGLIP 283 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + I + ++ I I L P +VG +K+ + L+ G Sbjct: 284 MLITYFFT-DPHKMLEALIYMLIIQQIDGNILYPRIVGSVMKVHPITIMVLLLLSSNIYG 342 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++G+ + +++ I K +KE Sbjct: 343 IMGMIVAIPTYSILKEIVKFLANLYDNHKEAQQQK 377 >gi|227876851|ref|ZP_03994960.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269977828|ref|ZP_06184785.1| integral membrane protein [Mobiluncus mulieris 28-1] gi|227842748|gb|EEJ52948.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269933998|gb|EEZ90575.1| integral membrane protein [Mobiluncus mulieris 28-1] Length = 458 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 11/294 (3%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + ++ AV V + L ++ + V A + W Sbjct: 138 RLQKWRFPNALSAAVSLIVGISAL----TAAIWVSVSQLASGAPALVRKAGGGFGKLMTW 193 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 LSD P G+ + ++ + + L L E + + A L+ +I Sbjct: 194 LSDEPLGLNSEDIDHYAKALSRQLGGLLEKYSSSIAS-----SAWSVTSSVLNLVAAIFI 248 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + LFFF +DG I L + ++ ++A + + + Sbjct: 249 SVFCLFFFLKDGRRIWVWFMRLLPVPLREPVHEAGIRGWITLKGYIKAQAMVAGVDAVFI 308 Query: 230 GSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAI 287 G S L ++ + + IP +S A+++ + L+ + A + + Sbjct: 309 SIGAAFLGAGSMTIPLALLIFLASFIPIVGAVSTGAIAVLVILLDQGLVKAIIMLIVILA 368 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L+P L+ + + L + G ++G + ++A + + Sbjct: 369 VQQIESNVLQPLLMSNAVNIHPLVVLLAITVGGYFASIIGALLAVPIVAFLNTV 422 >gi|288934120|ref|YP_003438179.1| hypothetical protein Kvar_1239 [Klebsiella variicola At-22] gi|290508325|ref|ZP_06547696.1| permease [Klebsiella sp. 1_1_55] gi|288888849|gb|ADC57167.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] gi|289777719|gb|EFD85716.1| permease [Klebsiella sp. 1_1_55] Length = 354 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 122/347 (35%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP + + S T Sbjct: 10 RRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVR--LERIGLSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ + LL F + ++ + + + + + +P A Sbjct: 68 WA---TSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++++ T D + +++ + L + ++ + + +FF +D Sbjct: 125 MDAGIIDAMAENMRNRMLTV-----GDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I + + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G LF I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|238919126|ref|YP_002932640.1| hypothetical protein NT01EI_1197 [Edwardsiella ictaluri 93-146] gi|238868694|gb|ACR68405.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 359 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 122/348 (35%), Gaps = 16/348 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I I+ + +YF G AP+L A+++ + WP + + S Sbjct: 10 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHK--LQLVGCSRL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 + + + + + ++ +L + + L+S + + + P M A Sbjct: 68 WAVCVVLLLFIGIVLLTMLVVIPIAWQQGLALMSDMPKMVTRFYEYAATLPRRYPALMDA 127 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + ++ E+ LK + + + + ++ + + +FF + Sbjct: 128 GIIDVVVENLRARMALMGESVLKFSLASLV---------GLVTLAIYLVLVPLMVFFLLK 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + L + + + + I + G + + G+ + + G+ Sbjct: 179 DKGQMLNALRRVLPRERGLAGQVWLE-MNQQITNYIRGKVVEMVVVGVATYLVFLVLGLN 237 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLR 297 + L V+ I +IP GA + V + L + + LF+ + + L Sbjct: 238 YGLLLSVLVGISVLIPYIGAVLVTIPVVLVALFQWGMGADFWSLFIAYLVVQGLDGNVLV 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L + L L ++ G G+F L L+ + Sbjct: 298 PLLYSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAW 345 >gi|251794947|ref|YP_003009678.1| hypothetical protein Pjdr2_0912 [Paenibacillus sp. JDR-2] gi|247542573|gb|ACS99591.1| protein of unknown function UPF0118 [Paenibacillus sp. JDR-2] Length = 371 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 109/328 (33%), Gaps = 6/328 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P+L + + + P K ++ + + + + ++ Sbjct: 36 VLAALFVPLLISGMFYYLFRPFVRLLSMKLP--KVVAILLVYIGAIGICYLFFWMIWPPI 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + LV+ Q V WL + W E+ K ++L L Sbjct: 94 RDQSINLVNNFP---QIVASVQTWLESMQQHEWLKEIGQKDALSTENLTNKLTGSLDELL 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + +++ + + +++ +G + + + F + Sbjct: 151 NSVIGSV-RGIFNVIMNFFFLLGLVPFMIYYLLSEGDKLPGHILRMLPERFHKEASGALK 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I S L + ++ G++ Y L +P + LG+I AI IP P+ Sbjct: 210 EIDASIGSFILSKVLTSLLIGVLTFVGYLLIDMPYPLLLGLIAAITNFIPYIGPLIAFIP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + + + + I + P ++G + + ++G +G Sbjct: 270 TAVVALTVSPMTVLLVGVVLIVSNQIEANLIGPRIIGKQMNVHPFTVMLLVIGASSIIGA 329 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ I + A+I +I K N+ Sbjct: 330 FGMIIVVPVYAIIKIIATRVYAFRKHNR 357 >gi|85703786|ref|ZP_01034890.1| membrane protein [Roseovarius sp. 217] gi|85672714|gb|EAQ27571.1| membrane protein [Roseovarius sp. 217] Length = 347 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 126/340 (37%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + V L+FL P + I + P+ +T + VI ++++ I+ Sbjct: 8 AVVAFVLLWFLGDVILPFVLGGAIAYFLDPVADRLERLGLSRATSVGVITLLAILAFVII 67 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + + V+ +A + + R+L+ ++ + S + Sbjct: 68 ALLVIPSL----VNQAVALFNIAPELANDLHRFLTTHFPSLF------EADSALNKTLLS 117 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ G + S ++ + ++ + + + D ++ ++D L Sbjct: 118 VGETIRERGGQLLETVLSS-AASMVNILILLVIVPVVSVYLLYDWDNMVAEIDRLLPRDH 176 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++R + + S GM + + G A L G+ + +G I ++ IP Sbjct: 177 APVIRRLARQIDNTLASFIRGMGTVCLILGTYYAVALMLVGLQFGLVVGAIAGLITFIPY 236 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I +++ L + G+ + + I L P LVG + L + Sbjct: 237 VGSIVGGVLAVGLALFQFWGDWVSVGLVAAVFVSGQIIEGNFLTPKLVGSSVGLHPVWLI 296 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A + VI + +I ++++ Sbjct: 297 FALSAFGALFGFVGMLVAVPVAAALGVIARFAIDQYRDSR 336 >gi|170016551|ref|YP_001727470.1| permease [Leuconostoc citreum KM20] gi|169803408|gb|ACA82026.1| Predicted permease [Leuconostoc citreum KM20] Length = 367 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 113/325 (34%), Gaps = 16/325 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIY---SSFISKKEESSTFLAVIATVSVMC-LFIVPLLFL 81 F+ F P++ A + + P+ + ++ LAV+ T + L+ L Sbjct: 40 FISTVFVPLVVAGFLYYVLKPLLTLIKRIQIRGKKIPHQLAVVVTFIFFLSVIAGALVVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L + Q + W ++L+ ++ + + Sbjct: 100 VPTLIREITNLADSLPSFAQDMQQFAT--------KTMNSHWFENLNLSINVSE-VKNAV 150 Query: 142 KTNGIDFIPRFASRFGMIFL---DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 F+ A G + + +++I + + LF+ D + + Sbjct: 151 GKYAASFLTITAGTLGTVVTTVTSFTINLITIPVVLFYMLSDSERFVPAIKKMFPARHAE 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + I G I GL + Y++ G P LGVI I ++P Sbjct: 211 KISELMAKMDRTIEKYISGQAIEMGFVGLSMTIGYFIIGQPYAWLLGVIAGITNIVPYIG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P S+ + + + + + + + P ++G + + L F L+ Sbjct: 271 PWIGVVPSLIVASTQSWKQVIFVLIVMTVVQQLDGNFIYPNVIGKSLAIHPLTIVFLLMV 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G++G+ + + A++ VI K Sbjct: 331 AGNLWGIVGMILIVPVYAVLRVIVK 355 >gi|302870180|ref|YP_003838817.1| hypothetical protein Micau_5736 [Micromonospora aurantiaca ATCC 27029] gi|302573039|gb|ADL49241.1| protein of unknown function UPF0118 [Micromonospora aurantiaca ATCC 27029] Length = 455 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 98/295 (33%), Gaps = 13/295 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + V + + L + + + EL K +++ + W Sbjct: 152 WLLRARLPRSLATAVVLVGGLAAVVGTLTLVVNEFIKGVPELSQK---SSEGVRQIQDWF 208 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + S+L + +E F A + + + Sbjct: 209 KTGPLHLSDSQLNRYIDEAQNWINGNTERFTSG---------AISTAATLAEVLTGTVLV 259 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + A FFF RDG +I + L L R + + ++A + + +G Sbjct: 260 LFATFFFLRDGNNIWRFLVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIG 319 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 L +P L + + A IP GA +S + L+ A + Sbjct: 320 IFLVLFDIPFAFPLAALVFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQ 379 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L+P ++G + + L G+ GV G+ G + L+A++ + Sbjct: 380 QVEGHVLQPLIMGRAVAIHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRR 434 >gi|254492420|ref|ZP_05105592.1| conserved domain protein, putative [Methylophaga thiooxidans DMS010] gi|224462312|gb|EEF78589.1| conserved domain protein, putative [Methylophaga thiooxydans DMS010] Length = 356 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 121/343 (35%), Gaps = 8/343 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ +++ + Y L P A ++ + P+ + K + + + Sbjct: 9 MSDINKLILVIVVIVSGWLFYQLSPVLMPFFIAALLAYLGDPLVDKLETWKLSRTISVTL 68 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + +V + + I+ L+ L K + + WL + L T Sbjct: 69 VFSVLFLVVSIMLLVLLPLLSAQVAKLFTNLPGYLTTLQKLIEPWLISVGLPTDVLNLQT 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + E + + +R GM+ L + +++ + + F+ RD + Sbjct: 129 LKQALSNYWSQVGEVAGG------VFNYMTRSGMVLLQWVGNLVLIPVLTFYLLRDWDVL 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + ++S ++ G ++ ++ L G+ + L Sbjct: 183 VARFRELLPRRYSGTFIQMSLECDDMLAGFIRGQLMVMFALAVIYTVGLTLIGLELALLL 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI +++ +P I ++ G + + A I L P VG Sbjct: 243 GVIAGVVSFVPYLGLIVGIVLAGLAAFFQFGEWLPVLYVAIVFAAAQAIEGMVLTPRFVG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I L + F ++ G + G G+ + + A++ V+ + + Sbjct: 303 ERIGLHPVAVIFAVLAGGQLFGFTGVLLALPVAAVVMVLLRHA 345 >gi|330445198|ref|ZP_08308850.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489389|dbj|GAA03347.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 358 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 121/348 (34%), Gaps = 14/348 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF P+L A+++ + WP+ ++K TF ++ Sbjct: 15 DPHAVSLVAILLGGFLTIYFFGSLITPLLVAIVLAYLLEWPVAR--LTKLGLPRTFSVML 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + L L ++ L + V + ++S +P + Sbjct: 73 VLLLFAGLMSLALFGLVPTIWHQVVNLTADVPKMFN---DLQVYVSSLPERYPDFVQPAQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +L+ ++ + S + +I + + +FF +D + Sbjct: 130 VVDLMNNLREKVLGMGESVVKGSLASLVS-----IATLGVYLILVPLLIFFLLKDKDEMM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q L + K+ + + I + G I + G+ + + + V LG Sbjct: 185 QTLLKVLPK-NRRLASKVGSEMNEQISNYIRGKVIEILIVGIASYVTFAVMDLRYAVLLG 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA V++ L + L L I + L P L Sbjct: 244 VLVGLSVLIPYIGAAAVTVPVAMVGLFQWGWTPDFWWLLLAYGIIQALDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L L+ +W + A E Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALLSAEDE 351 >gi|254460825|ref|ZP_05074241.1| membrane protein [Rhodobacterales bacterium HTCC2083] gi|206677414|gb|EDZ41901.1| membrane protein [Rhodobacteraceae bacterium HTCC2083] Length = 357 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 116/329 (35%), Gaps = 14/329 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I ++++++L P + I + P+ + S I T+ + +F++ Sbjct: 17 AIFMLAMWYLGDVILPFVLGGAIAYFLDPVADKLEN-LGCSRALATTIITLVAVVIFVLM 75 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +L + + + L Q + + + QSL + Sbjct: 76 ILLVVPTLINQAIALFEVAPQLFQDLQAFLA--------ERFPQALDEGSTLRQSLLSIG 127 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ET G +S ++ + + + + F+ D +++ ++ +L Sbjct: 128 ETIRAKGGELLSSVLSSAS--SIINIVVLFLIVPVVAFYLLLDWDNMTARIYTLLPRDHA 185 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++++ + + + + GM + + G A L G+ + +G I ++ IP Sbjct: 186 PTVRELASQIDQTLAAFIRGMGTVCLILGTYYAIALMLVGLQFGLVVGFIAGLITFIPYV 245 Query: 258 APISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFF 314 + A++I L + + + G + V L P LVG + L + Sbjct: 246 GALVGGALAIGLGLFQFWGDWVSLGLVAGIFVIGQVLEGNVLTPKLVGSSVGLHPVWLLL 305 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L G +G+ + + A + VI + Sbjct: 306 ALSVFGSLFGFVGMLVAVPVAAALGVIIR 334 >gi|319651819|ref|ZP_08005944.1| hypothetical protein HMPREF1013_02556 [Bacillus sp. 2_A_57_CT2] gi|317396471|gb|EFV77184.1| hypothetical protein HMPREF1013_02556 [Bacillus sp. 2_A_57_CT2] Length = 373 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 116/341 (34%), Gaps = 12/341 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + L + +L P + L I F P + K + +IA + + + Sbjct: 16 IGVVILSLYAFLYLSKVTYPFIIGLAIAFLINPFVNMMEVKWKIPRALAVLIALILIFAI 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + L + L V I ++L + + Sbjct: 76 FAGLITLLVAEIVSGADYLAKVVPQHLDTLIDFIEQFFAGQIIPLYNQLASLFNNLGTGQ 135 Query: 134 KILSETFLKTNGIDFIPRFA----------SRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + T ++ G F F + +IF ++A FF +D Sbjct: 136 QDTIMTNIENVGKQFGSTLGDFIQAFFEKIPNILSWFPNAATVLIFSLLATFFISKDWHR 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S + + + + K + + +++ + + V + Sbjct: 196 LSGLFSRILPSRAKKSGRTVFADLQKALFGFVKAQATLVSITTVIILAGLLILRVDYAIT 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++T ++ +IP G + F IY I G + A L + I L + + + P ++ Sbjct: 256 IALVTGLVDIIPYLGTGLVFVPWIIYEAIGGEMSRAIGLGILYIIVL-VQRQIMEPKILS 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I L L T L G + +G LGL GPV + LI + K Sbjct: 315 SSIGLDPLATLIALFVGFKLIGFLGLIAGPVTLVLITTLHK 355 >gi|220912007|ref|YP_002487316.1| hypothetical protein Achl_1236 [Arthrobacter chlorophenolicus A6] gi|219858885|gb|ACL39227.1| protein of unknown function UPF0118 [Arthrobacter chlorophenolicus A6] Length = 439 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 121/344 (35%), Gaps = 17/344 (4%) Query: 15 MIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ + ++ L PV+ A ++ P+ + ++ + I + + Sbjct: 51 LILLMAGTLIWLLSHITFLIIPVMVAALLAGLLSPVTAWL-KRRGLPAGLAVAITVLGFI 109 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + ++ EL + + + V WLSD P + A+++ Sbjct: 110 AVISGALALVGRQLVIGFGELWQQALEGVR---QVQTWLSDGPLHLTAAQIDQYVKEASD 166 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L+ S + L A FG + ++ + L FF +G I L L Sbjct: 167 ALQNNSSSILSG---------ALSFGSTAGHFAAGLLLALFILIFFLLEGDRIWAFLVRL 217 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A R + S +A + + +G + GVP + LGV+ + Sbjct: 218 LPRRARAAAFGAGRKGWASMVSYARIQMFVAAVDAIGIGVGAAIIGVPLALPLGVLVFLG 277 Query: 252 AMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + +++ L L+ NA + + L+P ++G + L + Sbjct: 278 SFIPVVGALVTGVIAVLLALVANGPVNALIMLAIVLAVQQLEGHILQPLVMGKAVSLHPV 337 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G ++A+ + E+++ Sbjct: 338 AVILSVAAGSYLAGIPGALFSVPILAVANSAIRYIAARTWEHEQ 381 >gi|222056187|ref|YP_002538549.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221565476|gb|ACM21448.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 358 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 122/322 (37%), Gaps = 4/322 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F PV ALI+ + P+ + + + + ++ V+ + L F+ Sbjct: 31 FLPVFIALILTYILNPLVAKLAERGMNRTVAIVLVFFALVLLATLAILFFIVSIKGELGS 90 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ AN+ +P + + + + + L+ +S + K + Sbjct: 91 IEINLPEYANRLYNYIPAGVKAYLDIETPEKAYQHLTTALERLRGISFSLFKETFA--VV 148 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A + F+ L I LF+F D + L +L + ++ + + V +V Sbjct: 149 TRAFSSTLAFVLSILGYFITPIYLFYFLLDMPELKTTLLNLVPERYRPWFCQKAAEVDEV 208 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIY 268 + S G ++ + ++ + G+ + +G I+ ++ MIP + ++ + Sbjct: 209 LSSFVRGQLMLCVILAVLYSIGLYFIGIDLAILIGTISGLLFMIPYLGTLFGIVFSMLMA 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L ++ + W + + P +VG + L + T L+ G + G+ G+ Sbjct: 269 FLKFHDLLHPMLCLGWFMLVQAAEGGIITPKIVGNKVGLHPVVTILALLIGGQWFGIFGM 328 Query: 329 FIGPVLMALIAVIWKESIMAIK 350 + + A++ V ++ + + Sbjct: 329 LLAVPVTAVLNVFFRSLLDYYR 350 >gi|291297772|ref|YP_003509050.1| hypothetical protein Snas_0238 [Stackebrandtia nassauensis DSM 44728] gi|290566992|gb|ADD39957.1| protein of unknown function UPF0118 [Stackebrandtia nassauensis DSM 44728] Length = 421 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 118/331 (35%), Gaps = 14/331 (4%) Query: 13 RWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +++ +V + +L + P+L +L++ P+ + + + A I + Sbjct: 77 RALVIAAAVVGVLYLASILSFVVIPILVSLLLAAMLQPLVALLVKAHVPR-SIAAAIVLI 135 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + + LV V + + + W P L K ++ Sbjct: 136 AGIAAVAGVLTLVINQFVANIDTLVDSV---QKGLLNLQDWAKYGPL-----HLEQKQIN 187 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S T ++ + A I + ++ FFF RDG I L Sbjct: 188 NFFSEFQTVITDWLSDNQSILAGTAVESLGIVFNILTGAFLVLFTTFFFMRDGRRIWTFL 247 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + S ++A + + +G+ + + L + Sbjct: 248 VRMLPERAHEPLLHAGFASWRTLVSFVRATILVAFIDAVGIGAWLMFLDIELAIPLAALV 307 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKL 307 + A IP V++ + + G+ + L L G I + V+ L+P L+G + + Sbjct: 308 FLGAFIPIIGATVSGIVAVLVALVGDDWVTALLVLAGVIVVQQVEGHLLQPLLMGRAVSV 367 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + GV G +G I ++A++ Sbjct: 368 HPLAIVLAVAAGVVLAGPIGALIAVPIVAVL 398 >gi|83949531|ref|ZP_00958264.1| membrane protein [Roseovarius nubinhibens ISM] gi|83837430|gb|EAP76726.1| membrane protein [Roseovarius nubinhibens ISM] Length = 347 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 117/342 (34%), Gaps = 18/342 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + LV L+FL P + I + P+ K + T+ + LF+ Sbjct: 7 VTLVFLVVLWFLGDVILPFVLGGAIAYFLDPLADRLE-KLGLTRAMAVATITLFALLLFV 65 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP--QSL 133 + L + + + L + L+ G + + Sbjct: 66 IMALLVVPTLIKQAVALF-----------DIAPQLARDLEGFISRNFPQVGDGDSTLRQS 114 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +K+ G + ++ L + + + F+ D + +D L Sbjct: 115 LAVVGDTIKSKGGQLLDSAIGSV-SSLINVVLLFVIVPVVAFYLLYDWDRMVAAVDDLLP 173 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +++ + + + S GM + + G A L G+ + +G + ++ Sbjct: 174 RDHAPTVRHLAKQIDRTLASFIRGMGTVCLILGTYYAGALMLVGLQFGLVVGFVAGLITF 233 Query: 254 IPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + A++I L + G+ + + A+ I L P LVG + L + Sbjct: 234 IPYVGALVGGALAIGLALFQFWGDWVSIGLVAGIFALGQVIEGNVLTPKLVGSSVGLHPV 293 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L G +G+ + + A I V+ + +I + + Sbjct: 294 WLIFALSVFGALFGFVGMLVAVPVAAAIGVLARFAIQQYRSS 335 >gi|83942871|ref|ZP_00955331.1| membrane protein [Sulfitobacter sp. EE-36] gi|83845879|gb|EAP83756.1| membrane protein [Sulfitobacter sp. EE-36] Length = 359 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 116/340 (34%), Gaps = 18/340 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + LV L+F P L I + P+ + S ++ T+ + +F++ Sbjct: 17 ALFLVFLWFTGDVLLPFLIGAAIAYFLDPVADRLEA-MGLSRAMATMVITLVALLIFVLM 75 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L + + + L ++ + +E + L +L+ Sbjct: 76 ALLVIPTLINQAINLFEVAPELTRNFT------------NFLTERFPALLDEGSTLRSSI 123 Query: 138 ETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T + A L+ + + + + + D + Q+D L Sbjct: 124 NSIGSTIQERGGEVLNTAISSAASLLNVMVLFVIVPVVAVYLLLDWDRMVAQIDRLLPRD 183 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++++R + + + GM + + G A L G+ + +G I ++ IP Sbjct: 184 HAPVIRRLARDIDRTLAGFIRGMGTVCLILGAYYAIALMLVGLQFGLVVGFIAGLVTFIP 243 Query: 256 GGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A++I L + G+ F+ + + I L P LVG + L + Sbjct: 244 YLGAVLGGALAIGLALFQFWGDWFSIGMVAGIFVLGQMIEGNFLTPKLVGNSVGLHPVWL 303 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +G+ + A + VI + + E+ Sbjct: 304 ILALSVFGSLFGFVGMLAAVPIAAALGVIARFATEQYVES 343 >gi|325970365|ref|YP_004246556.1| hypothetical protein SpiBuddy_0529 [Spirochaeta sp. Buddy] gi|324025603|gb|ADY12362.1| protein of unknown function UPF0118 [Spirochaeta sp. Buddy] Length = 362 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 115/332 (34%), Gaps = 20/332 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMCLFIVPL 78 F+ F P+L LII + + + + +I+ + + L Sbjct: 35 FVFSLFKPLLLGLIIAYLVDIPAKKLEVRFRKRIKSPMVARSLATLISLCLFLLIIAGVL 94 Query: 79 LFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L +++ S + VL + + +++S P + +++ S Sbjct: 95 VLLIPQLGFAIRQFSSNLPVLYEESADSLEQFVSRRPELAQGFAMVETYVNTAIEEFKAS 154 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + S +++IF + LF + +QL L + P Sbjct: 155 SPKLADYTFSLLGGAISGIATS----VVALIFSLYLLF----GKHRLVRQLGYLAKRFMP 206 Query: 198 AYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ K F G + AI G + L P + +G + + A+ Sbjct: 207 EQHYQKLFSTMQVANKTFSKFFTGQFLEAIILGSLCTLGMLLFRFPYALTVGSVVGMTAL 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP A+ L+ ++ A L+ I + + P +VG + LP + F Sbjct: 267 IPLVGAYLGGAIGFVLIFGQSLRLALFFLLFLVILQQLEGNLIYPRVVGSSVGLPGVWVF 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ G G+ G+ G L A + + K+ Sbjct: 327 ASVILGAGLFGIPGVLFGVPLAATLYHLLKQD 358 >gi|293609875|ref|ZP_06692177.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828327|gb|EFF86690.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123103|gb|ADY82626.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 397 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 119/329 (36%), Gaps = 8/329 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K P + A + + P+ + K + + V + + L +L Sbjct: 26 KPVVIPFIGAFFLAYLFSPLVDVLV-KMKLPRWLAISVVFVGIGVTLTIALWYLVPLIWK 84 Query: 88 EMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ + W+S ++ +++ +T + I Sbjct: 85 QLVYARDSIPAGIHWINATFLPWVSST---FNVQQMEIDTEQLSKAVMEYVQTNYSADSI 141 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + ++ G+ F+ +++ + I F+F D + Q L L + A +I Sbjct: 142 QAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWERMLQNLRRLIPRPYEATTLQIVGE 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V+ + G ++ + G+V L G+ + +G++ + ++IP + Sbjct: 202 CHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAA 261 Query: 267 IY--LLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + L G + + + + I + L+PFL+G I L + F ++ G + Sbjct: 262 VIASLFQFGLDWMHLLLVGIVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQLA 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G LG+ I + A+I V+ K + + Sbjct: 322 GFLGMLIALPVAAVIVVLLKHLRENYERS 350 >gi|325283522|ref|YP_004256063.1| hypothetical protein Deipr_1297 [Deinococcus proteolyticus MRP] gi|324315331|gb|ADY26446.1| protein of unknown function UPF0118 [Deinococcus proteolyticus MRP] Length = 371 Score = 84.5 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 119/349 (34%), Gaps = 7/349 (2%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLS----ALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R ++ ++ + Y G + +L A +I + + P+ + + + + + Sbjct: 21 RLVVFGLLAFAAYRFTGLISSILVNFAIAYLIAYIANPMLNWLERGRVPRGLGVLFVLLL 80 Query: 69 SVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 L + LL + + +++L V +WLS Sbjct: 81 FGGLLTVAGLLLGTIASQLIDLLRQLPQLVQNLEGWADSWIQWLSARGVTGLEDARAGMT 140 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSIS 185 + ++ L + + P+ A + + L ++ +++ + D ++ Sbjct: 141 ETVQTYIRNLGDNLVPMLQRWLDPQGALLTSIATIGSVLGRLLIVMLMSVYLMLDYSRVN 200 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + + + I G +IA+ G V+ L G+PS +A+G Sbjct: 201 RAILKMFPRPWQPRVLEFADLAGTAIGGYVRGQLLIALFVGTVVALGLSLLGIPSALAIG 260 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +IP PI +I L I + + L P ++ Sbjct: 261 FLAGAFNIIPYLGPIIGAIPAILLAAPMGITKVLLAVGVFLVANQVEGSFLSPIVLSKTT 320 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + ++ G +G G I L+AL + ++ + + E Sbjct: 321 DLHPITVLLSILIGASVLGFAGALIAVPLVALGKLAVEKYYYSSRIYTE 369 >gi|315503542|ref|YP_004082429.1| hypothetical protein ML5_2759 [Micromonospora sp. L5] gi|315410161|gb|ADU08278.1| protein of unknown function UPF0118 [Micromonospora sp. L5] Length = 452 Score = 84.5 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 98/295 (33%), Gaps = 13/295 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + V + + L + + + EL K +++ + W Sbjct: 149 WLLRARLPRSLATAVVLVGGLAAVVGTLTLVVNEFIKGVPELSQK---SSEGVRQIQDWF 205 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + S+L + +E F A + + + Sbjct: 206 KTGPLHLSDSQLNRYIDEAQNWINGNTERFTSG---------AISTAATLAEVLTGTVLV 256 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + A FFF RDG +I + L L R + + ++A + + +G Sbjct: 257 LFATFFFLRDGNNIWRFLVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIG 316 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 L +P L + + A IP GA +S + L+ A + Sbjct: 317 IFLVLFDIPFAFPLAALVFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQ 376 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L+P ++G + + L G+ GV G+ G + L+A++ + Sbjct: 377 QVEGHVLQPLIMGRAVAIHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRR 431 >gi|23099465|ref|NP_692931.1| hypothetical protein OB2010 [Oceanobacillus iheyensis HTE831] gi|22777694|dbj|BAC13966.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 355 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 130/342 (38%), Gaps = 17/342 (4%) Query: 11 IMRWMIMFIILVSLY-----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ +F+I V Y F+ P + A +I + P+ Sbjct: 20 VIITFYLFVITVPYYSGFFTFVGKLLIPFIIATLITYLLHPVIEKLHRLHIHRG------ 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +S++ ++++ + L +V ++ +++ +P + S + +T Sbjct: 74 --ISILLIYLIFFGGVGLSIYLGYPVIVQQITEISKN---IPEFFSLYEQLILRVYEYTS 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L ++ + ID + +D + I + + +F+F +D I Sbjct: 129 FLPEGVHDRMDDMIASIESRIDQLLSNLVGGFDGLMDKIIIITVIPVLVFYFLKDFKQIL 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + K++ + + K + G I+++ G+ + + +P + L Sbjct: 189 SFLGKFIPSQYRDDAKRLLKELDKGLGGYIRGQLIVSLFVGIASFLLFLIMKIPYGLLLA 248 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I AI+ +IP G I V G+ + L I I L P+++G Sbjct: 249 IILAIVNIIPYFGPIIGAVPVITIAYTAGDSGKVLLVILALFILQIIESNLLSPYIMGKT 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I++ + F L+ G + G+LG+ + ++ + VI ++ I Sbjct: 309 IRIHPVAIIFALLFGSQLGGILGMILAVPILMIAKVIVQQFI 350 >gi|284035595|ref|YP_003385525.1| hypothetical protein Slin_0663 [Spirosoma linguale DSM 74] gi|283814888|gb|ADB36726.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 373 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 117/339 (34%), Gaps = 18/339 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + + I+ V++Y + P+ + ++ P+ I + +A Sbjct: 11 HQFSHSLLSLAILTVAIYLGQDILVPLAMSGLVAVLLRPVEDRLI-RLGIHKVIAISLAL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + L +L RW+ + + Sbjct: 70 LLAIVIVAGVTIILSMQLSDFADDLPKIRQNLADFFSDAKRWVRR----EYNVSYRQQEQ 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ ++ + + FI ++ + I +F + Sbjct: 126 YLKKAQAQTLDSLQSPDTLGFITGPLG-----------TLTLVPIYVFLLLYYRTMLLHF 174 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ V VI+S +G+ I + + GV + LG++ Sbjct: 175 VVVLFAEKHTNNVREVLGEVKSVIQSYMVGLLIETACVAALNSVGLLILGVQYSILLGIM 234 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPI 305 AI+ ++P + T +++ + N + L + + FI + L P +V + Sbjct: 235 AAILNLVPYIGGLVATVLTVIITFSNNPETSIILGVVIVFLVVQFIDNNVLVPLIVASKV 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ L + G++ G G+ G+F+ +A++ VI+ Sbjct: 295 RINALVSIVGVLIGGALAGVSGMFLSIPAIAILKVIFDR 333 >gi|260426954|ref|ZP_05780933.1| membrane protein [Citreicella sp. SE45] gi|260421446|gb|EEX14697.1| membrane protein [Citreicella sp. SE45] Length = 355 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 108/340 (31%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 V L+FL P + I + P+ S T+ + LF++ Sbjct: 14 AIAFAVVLWFLGDVLLPFVLGGAIAYFLDPVADRLERA-GMSRAMATGTITIGAVVLFVI 72 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + +L+ P + + P ++ Sbjct: 73 LALAVAPALARQTSQLIDTA----------PELFRQLQSFLTTHFPSIMVEGSPVRETLV 122 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S + M L+ L + + + + D ++ ++D L Sbjct: 123 SIGETIKERGAQLFDTVLTSAMSLLNILLLFVIVPVVAVYMLLDWDNMVARVDELLPRDH 182 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++R + + GM + + G WL G+ + +GV+ ++ IP Sbjct: 183 APVIRGLAREIDATLAGFIRGMGSVCLILGTYYAVTLWLVGLNFGLVVGVVAGMLTFIPY 242 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I A++I L + G+ + F+ L P LVG + L + Sbjct: 243 VGAIVGGALAIGLALFQFWGDWVWIAVVAGIFFFGQFLEGNFLTPKLVGESVGLHPVWLI 302 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + L A + VI + + ++K Sbjct: 303 LALSVFGSLFGFIGMLVAVPLAASLGVIMRFLVGQYTDSK 342 >gi|153940198|ref|YP_001391112.1| hypothetical protein CLI_1854 [Clostridium botulinum F str. Langeland] gi|170754473|ref|YP_001781400.1| hypothetical protein CLD_2788 [Clostridium botulinum B1 str. Okra] gi|152936094|gb|ABS41592.1| putative membrane protein [Clostridium botulinum F str. Langeland] gi|169119685|gb|ACA43521.1| putative membrane protein [Clostridium botulinum B1 str. Okra] gi|295319158|gb|ADF99535.1| putative membrane protein [Clostridium botulinum F str. 230613] Length = 364 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 111/320 (34%), Gaps = 9/320 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P+ F +K + + ++ + V+ L + + + + Sbjct: 43 LVPFIWAFGIAYMLNPLMKYFQNKFKLNRILSIILTYIIVIGLLTLFINTFVPKIIKNVG 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + I +W ++ A ++ ++ ++ L +N + Sbjct: 103 DLFAHSPDYINKTI---QWFNENIKYSKAYDMLMENSQISNNIPNLINKI--SNLTNTFI 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRI 206 + F + +F +I + D S+ + L + Sbjct: 158 NTFLNTTIKFTSSLVKFVFGLIISIYLLLDKESLIENFKKFILALTGEKIYSKTLSFFKE 217 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V +G I ++ GL+ + + VP + I I MIP P + Sbjct: 218 VDLVFSKFIIGKAIDSLIIGLMCFAGLNIMKVPYAALIAFIVGITNMIPYFGPFIGMIPA 277 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + N A + ++ I L P ++G + L + F + G T G++ Sbjct: 278 FVITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIGGGTFGVM 337 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ + A+I + + I Sbjct: 338 GMFLSVPIAAIIKIYLDKYI 357 >gi|291296851|ref|YP_003508249.1| hypothetical protein Mrub_2478 [Meiothermus ruber DSM 1279] gi|290471810|gb|ADD29229.1| protein of unknown function UPF0118 [Meiothermus ruber DSM 1279] Length = 369 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 117/333 (35%), Gaps = 14/333 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + A I + + PI + ++ + + V + L + + Sbjct: 41 LITLALAFIFAYLTSPIVRALEKRQVPR-----FVGVLLVYLGLGLFLGLASFLIAEMVN 95 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-------WTKHLSHPQSLKILSETFLKT 143 L V + P+ W+ ++P + EL + + Q+L L Sbjct: 96 VLARYVTELPRILTPLLTWIENLPSRIGQVELPPALEGAFAQAAQGLQTLLEGFTQTLLQ 155 Query: 144 NGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S G + L + +I + D IS+ L + + Sbjct: 156 GLRALLAQGGSLVGFFASLVGGVLQLFAALIISIYLLYDLPQISKTLFQAVPLPYQPFVA 215 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I+ + + + G ++AI GL++ +W+ GVP +LG + A+ ++P I Sbjct: 216 DIAAKLDRAVGGYIRGQLLVAISVGLIVTVGFWICGVPLAGSLGFLAAVFNLVPFVGVIV 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 T ++ L + + + + L P ++G L + ++ G Sbjct: 276 STVPAMLLALTVGWPQVLAVLGVVVVANQVEAHVLSPRILGQATSLHPVSVIAAILVGSS 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL+G + L+A V++ E + + +E Sbjct: 336 LYGLVGALLAVPLLAFFKVLYTELYLNSRFYRE 368 >gi|160940250|ref|ZP_02087595.1| hypothetical protein CLOBOL_05139 [Clostridium bolteae ATCC BAA-613] gi|158436830|gb|EDP14597.1| hypothetical protein CLOBOL_05139 [Clostridium bolteae ATCC BAA-613] Length = 383 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 123/349 (35%), Gaps = 13/349 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKEES 58 +T I+ M I+L++ + L AP ++A +I + + + Sbjct: 13 KTEARKIFIINCMYFTILLLAAFVLLKYGLPMVAPFVTAFVIAYLLRRPICFASVRLHMN 72 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A++ + + + L K LV+ + + + I GG+ Sbjct: 73 RKITAILMVLLFYSVAGLLFTLLCVKMFSNGKSLVASLPSVYAN--YAEPVFTGIFGGIE 130 Query: 119 ASEL-----WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 L L + + S + + + + S F ++++ M+I Sbjct: 131 QYLLRMDPSLLGALEELEGHFVQSAGQMVSGISMSVMGWLSGFASSLPGMFINLLLMVIT 190 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF D ++ + +I V + +I + L Sbjct: 191 TFFIAADYELLTGFCLRQLGERPKEVFMEIQSYVVGTLFVCIRSYALIMTITFVELSIGL 250 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L GV + + + + A+ ++P G ++ + G+ A L + + + +V Sbjct: 251 TLIGVENSLVIAFLIAVFDILPVLGTGGIMIPWTVITALMGSHGLALGLLVVY-LVITVV 309 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P +VG I L + T + G + +G+LGLF P+ ++L+ + Sbjct: 310 RNIIEPKIVGSQIGLHPVVTLVSMFVGAQLLGVLGLFGFPIGLSLLRYL 358 >gi|297583924|ref|YP_003699704.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] gi|297142381|gb|ADH99138.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] Length = 355 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 129/345 (37%), Gaps = 6/345 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ +I + YF+ P+L+AL+ P + + S I Sbjct: 10 KKYISIALVIVVIGLLFYFVLPVATPILTALVTALFLTPAVNGLTKYTKLSRQLSVFIVF 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +S + LF + ++ + + + W++ + + +++ + Sbjct: 70 ISFLAALSAFSYILFTRALTQLNQFFNNLPSIINDIN--IAWINILDNLRIQFDQYSQDI 127 Query: 128 SHPQSLKILSETFLKTNGID--FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + F + + I A+ Y +S + +IAL+ F D + Sbjct: 128 VNEIDIAVTNALFGLRDQLQDINIIETATNLLTAIPSYIVSFLVFLIALYLFLIDLPRLK 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + +S + VI F +++I +V + + + Sbjct: 188 TKIFTYLSEDTAEKVRFMSARLSYVIFGFFKAQFLVSIIIFIVTLIGLLIVAPEVALIMS 247 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + IP G+ + Y LI G+ F A L + I L + +T+ P ++G Sbjct: 248 IFIWAIDFIPIIGSIAVLAPWAGYQLIAGDTFMAIQLLVLAGILL-TIRRTVEPKVMGHH 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I L L T L G+ +G +G +GP+ + + I+ Sbjct: 307 IGLSPLATLISLYIGLMLLGAIGFILGPLAVIFFQSAREAEIIKF 351 >gi|319405632|emb|CBI79255.1| permease protein [Bartonella sp. AR 15-3] Length = 385 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 109/319 (34%), Gaps = 13/319 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ +++ + PI F + F V+ T+S++ +F+ L+ L +++ Sbjct: 52 LFPFIAGIVLAYFLNPIVQIFE-RIGIHRVFGTVLITLSIIIIFVAALIILIPIISGQIQ 110 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG--IDF 148 + VS + + + + S P L + L + I Sbjct: 111 QFVSNGLPIYVNR------IQTFFVEHNFDWVRRYFDSDPNELHTNIKALLGQSSDFITS 164 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + G ++ + + F+ D + +DS + + + Sbjct: 165 LLNSLLKSGKSIVNIVSLFVVTPVVTFYILLDWPQMVNAVDSWIPRSHLITIRSLFHEMD 224 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 K + G + + + G+ + +G+ +++ IP + +SI Sbjct: 225 KAVAGFVRGQGTVCLILAGYYAIGLTITGLNFALLIGIFVGLISFIPYIGTMIGFILSIG 284 Query: 269 LLI----KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + I FI L+P LVG + L + F L +G Sbjct: 285 VAWVQFYPDDWSWVFVVMIVFFIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFGSLLG 344 Query: 325 LLGLFIGPVLMALIAVIWK 343 G+ + A+I V+ + Sbjct: 345 FTGMLVAVPAAAIIGVLVR 363 >gi|15892901|ref|NP_360615.1| putative permease PerM-like protein [Rickettsia conorii str. Malish 7] gi|15620091|gb|AAL03516.1| putative permease perM homolog [Rickettsia conorii str. Malish 7] Length = 356 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 123/355 (34%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++N I + + + + + P A II + P SK + S+ Sbjct: 1 MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + I + + +F + L L ++ ++ + N + +P M Sbjct: 61 FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQTEI-----LPPIMVKI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R+ +I ++ + + + I LF+F RD Sbjct: 116 YSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + SL +I + ++ + G I + A+ + G+ Sbjct: 176 WAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDL 235 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG++T + +IP + I L G + + + P Sbjct: 236 ALLLGILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIIGDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 350 >gi|298373571|ref|ZP_06983560.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274623|gb|EFI16175.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 362 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 115/336 (34%), Gaps = 9/336 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 S+ +L G P + +I + P+ + S +++I + ++C + L Sbjct: 25 FFSIRYLYGVLLPFVIGWLIAYFIHPLVCFIQYRIRVKSRIVSIILALLLVCGVLFGLGM 84 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + E + +V I +++++ + L + + + + + Sbjct: 85 LIIPIIYEEMSKIIPLVDKYLQDINAYPFINEVLIKNLQIHF--EALDYKKLISLDTLNV 142 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + S + L ++ +F +D +S + L + + Sbjct: 143 IIGKVVPQFWGLMSNLWQVVLAIGTMFFTVLYVIF-ILKDYEKLSDNMIKLFPKHYRNFA 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ + + F G +I + ++ + + G+P + +G++ I++ +P + Sbjct: 202 QELQTDLSGAMNRYFRGQALICLIIAILYSIGFTIIGLPMAIVMGILMGILSFVPYLHSL 261 Query: 261 SFTAVSIYLLIKGN------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 F V + I + + I D L P ++G + L Sbjct: 262 GFIPVIFFAFINSAETGNSLGLMLLGILIVFVIIQLSTDAFLVPRIMGKNMGLSPAIILL 321 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G LGL I + +K ++ + Sbjct: 322 SLSTFGVMFGFLGLIIALPFTTIAIAYYKRLVIEKE 357 >gi|225181230|ref|ZP_03734675.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] gi|225168010|gb|EEG76816.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] Length = 367 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 118/336 (35%), Gaps = 5/336 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + + F++ F P L ALI+ + PI S + ++ ++ L ++ Sbjct: 27 FIFIPLVVFVRLLFLPTLFALILYYLFRPIVSWLQGRNVARP-LAVLMIYATLALLVVLI 85 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + ++ EL+ I L + + + + + S Sbjct: 86 FGTVGVEAYEQLLELIDFFPAYLDQAINAVGALEE----TYLFQRFQANDMFSIEDLAES 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N + + S + + + + I LF+ +DG S + + + Sbjct: 142 VSEFILNALPGVQEGISSAMGFLANAVILFVLLPIILFYLLKDGESFHRFITRHIPEGYR 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 I R + + S G I+++ G++ + + G+ + L + + IP Sbjct: 202 EEALTILREIDHGLASFIQGQIIVSMSVGVLAYIGFLIIGIRHALILALFAVVTNFIPYI 261 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P T ++ + + + A + + I I + P ++G + L + L+ Sbjct: 262 GPWIATIPAVIVGLFTSGLMALQVLIVIFIVQQIESLFITPQVMGKKLYLHPMVIIVLLL 321 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLGL I + +I+ ++ K Sbjct: 322 VVGNLAGLLGLIIAVPTFVIFKIIFSHLYEFLRTKK 357 >gi|195978174|ref|YP_002123418.1| permease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974879|gb|ACG62405.1| permease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 375 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 107/295 (36%), Gaps = 5/295 (1%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + + + + +L++ + Q + + G ++ Sbjct: 80 LCMLLAYFTFISLIVWIISIVIPDLIASISSLTQFDTRAIKEVISDLGHNKLIARAINYI 139 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSIS 185 L + + FI + ++++ + + + Sbjct: 140 GGDAKLTETITNYSQQLLKQFIGVLTGILTSVTAVASAIINVVISFVFSLYVLASKEELC 199 Query: 186 QQLDSLGEHLFPAYWKKISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 QQ +L + Y K + +V R F+ T+ A+ G + ++ +P Sbjct: 200 QQATTLIDTYTGKYAKTVHYLVGLLHSRFRGFFVSQTLEAMILGSLTAIGMFILQLPFAG 259 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +GV+ A A+IP A+ L++ ++ A ++ I I + P +VG Sbjct: 260 TIGVLVAFTALIPVVGASIGAAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIYPRVVG 319 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G I LP + + G G++G+ + L A + + K+ I + +++ S Sbjct: 320 GSIGLPAMWVLMAITIGAALKGIVGMIVAVPLAATLYQVVKDHIHKKQALQDRQS 374 >gi|148979870|ref|ZP_01815748.1| permease PerM [Vibrionales bacterium SWAT-3] gi|145961562|gb|EDK26863.1| permease PerM [Vibrionales bacterium SWAT-3] Length = 358 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 115/340 (33%), Gaps = 14/340 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + + T ++ Sbjct: 15 DPHAVSLVAIILFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LQRLGIPRTPSVML 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L ++ + L ++ L++ + + ++++ IP Sbjct: 73 VILMFFSLMLLAIFGLVPTIWEQVGNLINDIPSMYGS---LQKFIATIPERYPELANLQI 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K + ++ + S + +I + + +FF +D + Sbjct: 130 VESVMSNAKNKALGMGESVVKGSLASLVS-----LATLGVYLILVPLLIFFLLKDKEEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGVLPR-NRRLATKVWEEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA V+I L G L L I + L P L Sbjct: 244 VAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLEPQFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWN 343 >gi|288802984|ref|ZP_06408420.1| membrane protein [Prevotella melaninogenica D18] gi|288334501|gb|EFC72940.1| membrane protein [Prevotella melaninogenica D18] Length = 374 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 125/364 (34%), Gaps = 16/364 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKE- 56 MR+T+ + I +I ++ + L G P A ++ + +PI K Sbjct: 1 MRQTITFDKFIRWALIALAVITVGFIINALSGVLLPFFIAWLLAYLLYPIVKFVQYKLHV 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I + V LF LF+ + ++ + ++ V + I Sbjct: 61 PGRALSIIITFLLVAALFTAIFLFIVPPMINQVDKFMTIVNRYLHETTHTNDIATMIQKW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + I + I + S I ++ FF Sbjct: 121 IRENQTEIERFLKSPDFTNTIKTAMPK-----IFSVIGQTASIVISIIASCITLLYT-FF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ + +W +++ + + + G ++++ G++ + + Sbjct: 175 ILLDYEVLTNNWIRIFPKNVRPFWAGLAQDAERELNNYIRGQGLVSLCMGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELF 290 P + +G++ I+ ++P + + L+ G F + A+ Sbjct: 235 DFPMAIGMGILIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFASALIVFAVVQL 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL I L LI W+ + Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEG 354 Query: 351 ENKE 354 + + Sbjct: 355 DGAQ 358 >gi|206581058|ref|YP_002237181.1| putative permease PerM [Klebsiella pneumoniae 342] gi|206570116|gb|ACI11892.1| putative permease PerM [Klebsiella pneumoniae 342] Length = 354 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 122/347 (35%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP + + S T Sbjct: 10 RRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVR--LERIGLSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ + LL F + ++ + + + + + +P A Sbjct: 68 WA---TSLVLILFVGILLLLAFVVMPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++++ T D + +++ + L + ++ + + +FF +D Sbjct: 125 MDAGIIDAMAENMRNRMLTV-----GDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I + + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G LF I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|108798197|ref|YP_638394.1| hypothetical protein Mmcs_1226 [Mycobacterium sp. MCS] gi|119867293|ref|YP_937245.1| hypothetical protein Mkms_1243 [Mycobacterium sp. KMS] gi|108768616|gb|ABG07338.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119693382|gb|ABL90455.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 376 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 81/249 (32%), Gaps = 6/249 (2%) Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +V + Q + D GG + S ++ Sbjct: 93 GLVAAVAPAIVEQSTELAQQATAGVVQVRDWLGGPPLDISEAQLDSAVTAITDRL----- 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I ++ I+ FF +DG L + + + Sbjct: 148 NSSSAQIASGVFTGVGAATSALVTAFTAIVVTFFLLKDGPRFIPWLRRTVGNPAAPHVAE 207 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + V + ++++ + +++G+ + GVP AL +IT I +P GA ++ Sbjct: 208 VLERVWSTLGGFIRTQALVSLVDAVLIGAGLVILGVPLAYALAIITFIGGFVPIVGAFVA 267 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L+ +A + + L+P+L +KL + + G Sbjct: 268 GGLAVLIALVSNGPVDALIVLGIILAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGAS 327 Query: 322 TMGLLGLFI 330 T G++G F+ Sbjct: 328 TFGVIGAFL 336 >gi|29375296|ref|NP_814450.1| hypothetical protein EF0699 [Enterococcus faecalis V583] gi|255971159|ref|ZP_05421745.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255973783|ref|ZP_05424369.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256617587|ref|ZP_05474433.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256761470|ref|ZP_05502050.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256854440|ref|ZP_05559804.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256957429|ref|ZP_05561600.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256964462|ref|ZP_05568633.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257077575|ref|ZP_05571936.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257080949|ref|ZP_05575310.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257083628|ref|ZP_05577989.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257086060|ref|ZP_05580421.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257089128|ref|ZP_05583489.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415270|ref|ZP_05592264.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257418314|ref|ZP_05595308.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257420962|ref|ZP_05597952.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294780483|ref|ZP_06745848.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300861769|ref|ZP_07107849.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29342756|gb|AAO80520.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|255962177|gb|EET94653.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255966655|gb|EET97277.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256597114|gb|EEU16290.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256682721|gb|EEU22416.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256710000|gb|EEU25044.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256947925|gb|EEU64557.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256954958|gb|EEU71590.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256985605|gb|EEU72907.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256988979|gb|EEU76281.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256991658|gb|EEU78960.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256994090|gb|EEU81392.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256997940|gb|EEU84460.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157098|gb|EEU87058.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257160142|gb|EEU90102.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257162786|gb|EEU92746.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294452482|gb|EFG20919.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300848294|gb|EFK76051.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] Length = 381 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 40 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 99 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 153 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 213 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 273 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +K + + +N Sbjct: 333 LGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 366 >gi|311069224|ref|YP_003974147.1| putative permease [Bacillus atrophaeus 1942] gi|310869741|gb|ADP33216.1| putative permease [Bacillus atrophaeus 1942] Length = 353 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 113/330 (34%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K P++ A+ I + PI S ++ + + LF + + Sbjct: 35 FCLVVKSILIPLIIAIFISYLLLPIIEWL-----HRSGLPRTLSLLIIYLLFFGGIGYGL 89 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 Y G+ + E ++ + + L + E S +E F+ Sbjct: 90 YKGVPVLIEQLTDLSESIPGIAETYDGLL-LKLHDHTDEWPDGIHSRMDRFIQRTEEFVA 148 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I DY L + +F+ +D + + + L + Sbjct: 149 KTIEGTIRSI-----RFVFDYILIAATIPFLVFYMVKDIDLMKKTVWYLTPKSWRKRGSA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL G ++W +P + LG+I + +IP P+ Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLIGLGAGVSFWFFDLPYPLILGLIIGLTNVIPYFGPVIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + + I F+ L P +VG +K+ + L+ G Sbjct: 264 AVPALLIAMAVSAKAVITVVITILILQFLEGNILSPLIVGRSLKMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ + A++ V+ + E+ Sbjct: 324 AGIIGMIVAVPAAAVLKVMMIHFLRMRTEH 353 >gi|212716396|ref|ZP_03324524.1| hypothetical protein BIFCAT_01319 [Bifidobacterium catenulatum DSM 16992] gi|212660649|gb|EEB21224.1| hypothetical protein BIFCAT_01319 [Bifidobacterium catenulatum DSM 16992] Length = 512 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 118/358 (32%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 ++ P+ + R ++ I + ++ ++ ++ +L I P+ + Sbjct: 35 DSRKPPEWLGRALLYIAIAIVVFTFCWRSWGKIEYLVIDIIVSLFIALAVEPMVVPLVKH 94 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +F ++ + + + + V + ++ LV+ + + Sbjct: 95 -GWKRSFASLFSLLMLAVILGVLFTLFGNLFVQQVIALVNGLPDLYEQMCQ--------- 144 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + S+ L +L ++T+ + A + ++++ +I+ Sbjct: 145 ---FVSQYANFRLPEINNLGNEILKNIQTSWVTDFAGTALNTVSGLFSFLINLMTVIMTT 201 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ G + + + + + I S I+A+ G Sbjct: 202 YYISAAGPKLRRAACQWMAPAAQRRFLFVWTVSQSQISSFLFSRAILALLNAFFTGICLM 261 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L VP + L + +++ IP G I ++ ++ A + ++ + I Sbjct: 262 LLHVPYWLPLALFCGMVSQFIPMLGTYIGGALPVLFAWGSCGLWQAVVVLMFICVYQQIE 321 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + P + + + F ++ G LG F+ ++A + I++ + Sbjct: 322 NLIFAPKISQRTMDINDAVAFLAVLAFTSLFGALGAFLALPVVASVQTIFRTYTKRYE 379 >gi|294501508|ref|YP_003565208.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] gi|294351445|gb|ADE71774.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] Length = 369 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 122/347 (35%), Gaps = 16/347 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + R + I+ + FL + + P + A I F P+ + F K ++ Sbjct: 8 RLFRLACVLTIIAASIFLSYYVSSLIYPFIIACCIAFFINPMVNLFELKLRLPRYLAVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASEL 122 + V + L + L + L V + + ++ +P + + Sbjct: 68 SMVLIFSLLAGLITLLITEIIAGSTYLAKVVPTNFKEVVIFIENIATEQILPFYERITSM 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM-------IFLDYCLSIIFMIIALF 175 + + Q+ + + + + + F + + IIF ++A F Sbjct: 128 FNNLNTGQQATILSNIKGVGNHIAQTVGDFLQNVLQSIPVLLSVLPNAATVIIFSLLATF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D + + + + + + + + +++ + Sbjct: 188 FISKDWYKLMAKSSVFIPKKVRENGQTVVVELKNALFGFIKAQLTLISITTIIVLFGLLV 247 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + + ++ ++ ++P G + F IY N+ A L + A+ L + + Sbjct: 248 LRVDYAITVALLIGLVDILPYLGTGLVFVPWMIYAFATDNVSFAVGLSVLYAVVL-VQRQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P ++ I L L T L G + +G GL +GPV++ ++ + Sbjct: 307 IMEPKILSSSIGLDPLATLIALFVGYQLIGFFGLIVGPVILVILKTL 353 >gi|312127608|ref|YP_003992482.1| hypothetical protein Calhy_1396 [Caldicellulosiruptor hydrothermalis 108] gi|311777627|gb|ADQ07113.1| protein of unknown function UPF0118 [Caldicellulosiruptor hydrothermalis 108] Length = 351 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 126/359 (35%), Gaps = 16/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISK 54 M L + + + +I + +YF P L AL + + P K Sbjct: 1 MHIINLVKRYFTDILFIALIAIVIYFFANMKAFWPILIPFLIALFLSYLLKPWVDFLEKK 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +I+ + + I+ ++ + E K+L+ V +H + +W +I Sbjct: 61 VRSRD-ISILISFAIIFGITIMVFVYFIPLFVSETKQLIQNVP---EHIALIQKWFFEI- 115 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++L + I E K F+ L + + I Sbjct: 116 DSKLLNKLNIDIKEILNANSINIEGISKQTLSIFL-----NIVKSISSNILYYLLIPIIS 170 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ RD + + L + I + +V+ G + A GL+ + Sbjct: 171 FYILRDWKRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAFIVGLLSFVGFS 230 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L V LGVIT I +IP PI + ++ + + + A + ++ + + Sbjct: 231 LLSVRYAALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSF 290 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 291 IISPRVIGSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|153808650|ref|ZP_01961318.1| hypothetical protein BACCAC_02949 [Bacteroides caccae ATCC 43185] gi|149128476|gb|EDM19694.1| hypothetical protein BACCAC_02949 [Bacteroides caccae ATCC 43185] Length = 377 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 134/364 (36%), Gaps = 20/364 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R I +++V + L G P A +I + +P+ F K + Sbjct: 1 MERKKITFDSFIRGAIGCVLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S ++++ + ++ + V L +L + ++S++ N + + Sbjct: 61 LKSRIVSILCALFLITVVGVSLFYLL------VPPMISEISRMNDLLVTYLTNGAGNNVP 114 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIA 173 SE +++ +ILSE + D +PR + I S I ++ Sbjct: 115 QNLSEFIHENIDLQALNRILSEENILAAIKDTVPRMWALLAESLNILFSILASFIILLYV 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +F D +I++ L + + + + V + F G ++A G++ + Sbjct: 175 IFILL-DYEAIAEGWLHLLPNKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGF 233 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAI 287 + P +ALG+ + M+P I F + ++ G F AI Sbjct: 234 LIIDFPMAIALGLFIGALNMVPYLQIIGFLPTVLLAILKAADTGQNFWIIIACALAVFAI 293 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 I D L P ++G L L MG+LG+ I L L+ ++ I+ Sbjct: 294 VQIIQDTFLVPKIMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII 353 Query: 348 AIKE 351 ++ Sbjct: 354 NKEK 357 >gi|86608241|ref|YP_477003.1| hypothetical protein CYB_0757 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556783|gb|ABD01740.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 417 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 117/307 (38%), Gaps = 9/307 (2%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRW 109 + V+ +S++ L + + + L++++ Q + V W Sbjct: 52 LAERLRIPRWLGVVLVYLSLIAGIAGLALLIGPTVATQTQRLLTRLPFYLEQLQLLVDTW 111 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 ++D+ G A+ + L PQSL + + + F L L+ + Sbjct: 112 IADLAGVDPAALDYLNQLLDPQSLMSWA-----VRSGQRVLVQSFDFTRGLLGGLLTTVL 166 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + G + + L L + + + + + + G +++ G+++ Sbjct: 167 TLFISGYMLVSGSDLVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMI 226 Query: 230 GSAYWLAGV-PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + G+ +ALGVI +IP G + + +++G L L+ Sbjct: 227 TVSLRFLGLSEFALALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILY-VA 285 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + L P LVG +++ L ++GG + +G++G I P +A +AV+ + + Sbjct: 286 VQNLETYVLDPLLVGSSVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYL 345 Query: 348 AIKENKE 354 K+ E Sbjct: 346 KPKQEAE 352 >gi|320546652|ref|ZP_08040964.1| permease [Streptococcus equinus ATCC 9812] gi|320448707|gb|EFW89438.1| permease [Streptococcus equinus ATCC 9812] Length = 371 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 125/335 (37%), Gaps = 14/335 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV---IATVSVMCLFIVPLLFLFYY 84 F A I+ +Y ++ ++ L + ++ + F++ + +LF Sbjct: 40 HPFMIGAGIAYIVNIVMS-LYEMIFTRLIKNKYLLKLKRAVSMILAYLTFMLLISWLFSI 98 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ ++ ++ + G + +SD + +L S+ L Sbjct: 99 VLPDLIASINSLLKIDTSGFSKFIKEVSDNKAVQEFLAYFGSSSDITATLSDYSKQILNQ 158 Query: 144 NG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I S L+ +S +F I L + +Q + L + Y K Sbjct: 159 VLAVLTNILTSVSTIASTLLNVFISFVFSIYVL----ASKEQLGRQFNLLIDSYLGKYAK 214 Query: 202 KI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + I+ K F+G T+ A+ G + +L +P +G++ A A+IP Sbjct: 215 TVHYVLDILHKRFHGFFVGQTLEAMILGSLTAIGMFLFKLPYAATIGILVAFTALIPVVG 274 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L+ ++ A ++ + + P +VGG I LP + + Sbjct: 275 AYIGVTIGFILIATQDVSQAIFFVIYLVVLQQFEGNIIYPRVVGGSIGLPGMWVLMAITI 334 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+LG+ + L A + + K+++ ++N+ Sbjct: 335 GASLWGVLGMLVAVPLAASLYQMIKDNVAKRQKNR 369 >gi|228966252|ref|ZP_04127312.1| hypothetical protein bthur0004_30660 [Bacillus thuringiensis serovar sotto str. T04001] gi|228793436|gb|EEM40979.1| hypothetical protein bthur0004_30660 [Bacillus thuringiensis serovar sotto str. T04001] Length = 352 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 20 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 78 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + ++ L+ + R G ++L+ + + Sbjct: 79 FLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMV 134 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 135 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 195 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 254 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 255 YVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 315 ILTAGNLFGIMGIILAIPGYAILKVL 340 >gi|289768697|ref|ZP_06528075.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698896|gb|EFD66325.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 402 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 115/358 (32%), Gaps = 16/358 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + +I L S F L G VL A + P S + Sbjct: 1 MPRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINVLIAFFLALAIEPAVSWMAGR-GMR 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 F + ++V+ + L ++ ++V + + + G + Sbjct: 60 RGFATFLVFLAVLIAAAGFVTLLGSMLAGQIVKMVEEF-------PDYLDSVINWVNGHF 112 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +EL + +++ + + A G +F ++ +++ F+F Sbjct: 113 HTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLF-----QLLTVLLFSFYFA 167 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + L S+ A + I ++A+ G+ + V Sbjct: 168 ADGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYILLEILEV 227 Query: 239 PSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P AL V +++ IP A+ + + N + A + ++ I + L+ Sbjct: 228 PYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQ 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L + + F ++ G +G +G I +A + + + Sbjct: 288 PKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|325924381|ref|ZP_08185920.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325545142|gb|EGD16457.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 389 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 130/339 (38%), Gaps = 13/339 (3%) Query: 12 MRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++W+ + + +L + L P + AL++ + P+ S + V Sbjct: 16 LKWVAVIVGVLWVVSLLSPILTPFVLALLLAWLGDPLVDRIERA-GRSRNMAVSLVFVLA 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF++ L+ L ++ L+ + I + IP + + P Sbjct: 75 LLLFVLALMILVPMIERQIMTLIDALPQMRTWAIS-----TAIPWLEAKTGVELMGWLDP 129 Query: 131 QSLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + + G + R G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTFFGYVQRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++ V+ G ++ + G++ + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLALESNDVLGGFIRGQFLVMLALGVIYATGLSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIP---GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP I ++ + +G ++ + + + + L P +VG Sbjct: 250 GFISFIPYLGATTGIVLALLAAVVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I L + F ++ G + G LG+ + + A+ V+ + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|289641569|ref|ZP_06473731.1| protein of unknown function UPF0118 [Frankia symbiont of Datisca glomerata] gi|289508664|gb|EFD29601.1| protein of unknown function UPF0118 [Frankia symbiont of Datisca glomerata] Length = 421 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 93/292 (31%), Gaps = 14/292 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 L++ +P + + + + L + + + E L +V Sbjct: 120 GLLVSALIYPTAMRL-RRHGVPKLVSSFVTVFGFLILVAGAGVGVGFNAANEFPSLSDQV 178 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 + V +L D P + S+L L L N + S Sbjct: 179 SQGVE---QVRDYLRDGPLHLSQSQL--------DDLTNDITRTLANNRGRLVSGVLSG- 226 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + + I+ + A FFF DG I + + + + + Sbjct: 227 ATVAAEVLTGILLTLFATFFFVHDGDRIWDWIVTRFPPGTEERVRGAGKEAWATVTGYIR 286 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNI 275 G +A+ + + + + GVP L ++T + IP GA ++ A + L+ + Sbjct: 287 GTMFVALVDAIGITIGLLVVGVPLVAPLALLTFLGGFIPIVGATVAGVAAILVTLVSNGL 346 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 A + I L+P ++ ++L L L G G+ G Sbjct: 347 VPALVILGVVLAVQQIEGHLLQPLVMRRAVRLHPLAIVVSLSAGGVLAGIPG 398 >gi|257439022|ref|ZP_05614777.1| putative membrane protein [Faecalibacterium prausnitzii A2-165] gi|257198512|gb|EEU96796.1| putative membrane protein [Faecalibacterium prausnitzii A2-165] Length = 403 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 117/344 (34%), Gaps = 17/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWP--------IYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 L G P + +I + P ++ F + + LAV T+ L I L Sbjct: 45 LTGILMPFIYGSVIAYLLKPVCNWIEAFLHKLFPERMHRFANMLAVALTILFGLLLIYAL 104 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++ + A + W+S +L S SL + Sbjct: 105 IMMIVPQLINSVTALYF--TARDNIGDFVEWISKQEFIANNKKLLDFIESSYDSLDANLD 162 Query: 139 TFLKTNGIDFIPRFASRFGMIFL-------DYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++K + + S + + ++ + +I + L + G L SL Sbjct: 163 AWIKNTLLPSMQNILSGAAVGVVNVVTWIKNFVIGLIVSVYLLASRKKFGQQGKLILYSL 222 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + R ++ G + + G++ A + PS + + VI + Sbjct: 223 VKPRWADLIMEEVRYADRMFGGFINGKILDSAIIGVLCYIACLIFKFPSALLVSVIIGVT 282 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P + L++ N A L+ + + + P ++G L Sbjct: 283 NVIPFFGPFIGAIPATLLILIQNPIKALWFVLFVLVLQQVDGNIIGPKILGNTTGLSSFW 342 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++ G +G+ IG L A+I + K+ + ++ Sbjct: 343 VLFAILLFGGLWGFVGMIIGVPLFAVIYDVIKKLVFHGLNRNDE 386 >gi|108805764|ref|YP_645701.1| hypothetical protein Rxyl_2979 [Rubrobacter xylanophilus DSM 9941] gi|108767007|gb|ABG05889.1| protein of unknown function UPF0118 [Rubrobacter xylanophilus DSM 9941] Length = 387 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 109/315 (34%), Gaps = 7/315 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + +V + + G L A ++ + P+ + + + + +++ Sbjct: 29 LVLAVVLIRQIGGVLLTFLMAGVLAYALNPLVRRLEAMRVPRA-LAVLGVFAALLAAVFA 87 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKI 135 LL + + +++ L+ + + + W +P G S + + + + Sbjct: 88 VLLVIIIPAVNQVQALLRNPQVVAEAAANLLAWAEGLPYVGERISAVDREAVLAFVQSNL 147 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + FI FG L+++FM+I + D I + SL Sbjct: 148 PPAGTMLKAALGFIGGVFGVFGT-----ILNLVFMLIVAIYMLLDRERIRRGALSLIPPT 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + ++ + G++ + + G + +GV + +IP Sbjct: 203 VRGNVLELFSAVEGALVRYLKAQLLLCVLMGVIGWAIVFFTGGEYALLIGVWVGVTELIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ L + + A + + L P ++GG + + L F Sbjct: 263 VLGPVLGAIPAVVLALVESPLKALLVAGLFLAAQQLEGNVLVPRIMGGSVGVHPLWVMFA 322 Query: 316 LVGGVRTMGLLGLFI 330 ++ G++G Sbjct: 323 MLSATALYGIVGALF 337 >gi|271963232|ref|YP_003337428.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270506407|gb|ACZ84685.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 443 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 106/317 (33%), Gaps = 15/317 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 V+ A+ + P S ++ + I +V+ F++ L + E Sbjct: 136 IVLVVVAMFLALGLNPAVESLQRRRLARR-WAISIVFGAVILFFVLFGLAIVPPVSQEAA 194 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +S V Q + P + S Q L + + + Sbjct: 195 SFISAVPGYTQELLANPT--------------LKELDSDYQILTRIGDYITSGGLAQTVA 240 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G + + S + +++ +F SI L L + + + Sbjct: 241 GGLVGAGAVVFNAFFSGVTLLVLTLYFLGSLPSIKDYLFRLVPSSRRERTRGLGDEIISG 300 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G +I++ G+V AGV +AL ++ A+ +IP + + Sbjct: 301 IGGYVAGNLLISVIAGVVTWVFLAFAGVEYALALALVVAVTDLIPLVGATIGAVLVSGVA 360 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + ++ + + + + P ++ + + T + G +G++G + Sbjct: 361 LLQSGTLGIACAIFFLVYQQVENYLIYPRVMKRSVDVAPAVTVIAALFGGALLGIVGALL 420 Query: 331 GPVLMALIAVIWKESIM 347 + A IA+I +E ++ Sbjct: 421 AIPVAAAIALIIREVVI 437 >gi|324998560|ref|ZP_08119672.1| hypothetical protein PseP1_07332 [Pseudonocardia sp. P1] Length = 404 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 1/216 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + A + + AL F DG + L L Sbjct: 172 QDNQQTLTSGAVSTAATVGEVLAGFALCLFALIFMLYDGSRLWSFLRLLAPARRRERVDV 231 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 R + ++AI + + +G W+ GVP + L + + A +P GA ++ Sbjct: 232 AGRRAFASLVGYVRATVLVAIVDAIGIGLGLWITGVPLALPLTALVFVGAFVPIVGAVLT 291 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L+ I A + + L+P L+G ++L L + GV Sbjct: 292 GGIAVLIALVANGIGTALVVLGVVLAVQQLESHVLQPVLMGRAVRLHPLAIALAVAAGVV 351 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G + LMA++ + + E++ Sbjct: 352 IAGITGALLAVPLMAVLTAAVRSLAAPHEVAPEQVD 387 >gi|269837139|ref|YP_003319367.1| hypothetical protein Sthe_1109 [Sphaerobacter thermophilus DSM 20745] gi|269786402|gb|ACZ38545.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 357 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 113/336 (33%), Gaps = 6/336 (1%) Query: 13 RWMIM----FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 RW+++ ++ L+ + P L II + P + + + Sbjct: 12 RWLLVTAAVLVVFWVLWRTRDALLPFLLGAIIAYLLAPAVDLLQRALPQQGRLARLARPL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ ++ L L G + L+ + V + + + Sbjct: 72 AILLAYVFALAILTVAGFYLVPPLIDQTVEFVRDLPSYWDDVRRESNALMRLYEARVPED 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQ 186 + ++ + G FG + + + ++ + + LF+ +D + Sbjct: 132 MRRQIEANLGALGQQVGTAARTAMMVTFGAVTTIIGFAAGLLLLPLWLFYVLKDQQRGLE 191 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + I +V V+ + G + + G+V G WL G+P + LGV Sbjct: 192 WFYGLWPESWRPDVRAIVGMVDDVMSAYVRGQLFLGVVIGVVTGITMWLIGIPQSLVLGV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP P + + + + + + + L P + G ++ Sbjct: 252 LAGFFELIPVLGPWLAFVAAALVTLATEPDRILFVGIAFLAIQQLENTFLVPKIQGDAVR 311 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LV G G+LG+ L A++ I+ Sbjct: 312 VHPALIMVLLVVGGSLWGVLGMIFIVPLTAVLRDIF 347 >gi|170782573|ref|YP_001710906.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157142|emb|CAQ02322.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 382 Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 115/336 (34%), Gaps = 16/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ I+ + LK PV+ ALI+ P+ + AVIA + Sbjct: 21 QILAVLVVAIAIVYAAISLKLVVIPVIIALILACAVRPMVLWMERR-GVPDALAAVIALL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LF + + + + LV L + Sbjct: 80 TGLVLFGGAVTAVVFGVQSQWPTLVKATSEGVDQLQAFIEEGGLPIDSAQIDSLRQSAVD 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + S + + A + ++ FFF +DG I Sbjct: 140 FLTSSQFGSGAIAGVSAAAEVVTGA--------------VLGLVVFFFFVKDGPQIWAFF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ KV+ G +A+ + + +G+ ++ GVP + L ++ Sbjct: 186 IRPFRGRGRKRAVRVGHEGSKVLGGYIRGTATVALVDTVFIGAGLFILGVPLALPLSLVV 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P GA ++ ++ L+ ++ A + + + L+P ++G +KL Sbjct: 246 FIGAFVPIVGATVAGILAALVALVTNDLGTAIWVVAIVILVNQLEGNLLQPVVLGNALKL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L G G++G + L A+ WK Sbjct: 306 HGLVVLLALTAGTILGGIIGAILSVPLTAVAWTAWK 341 >gi|294814765|ref|ZP_06773408.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294327364|gb|EFG09007.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 465 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 104/308 (33%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V SAL+I P + + + + ++ Sbjct: 100 LLVLAGTLWVLMRVISAVQLVVLAFASALLITALLQPTVARLL-RIGLPRGLATAVTAIA 158 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V Q + W + P + ++ + Sbjct: 159 GFAVMALVGWFVVWQVMENLDTLSDRVREGIQE---LRLWALEGPFHVSEGQINDLADNL 215 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ +E I + +++ + + + F DG I Q Sbjct: 216 SDTIGSNTEE---------ITSAGLQGVTALMEFLAGALLAMFSTLFLLHDGPRIWQWTL 266 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + G ++A+ + + +G W VP V L V Sbjct: 267 KLVPAQARPGVASAGPRAWATLTAYVRGTVLVALIDAIFIGLGIWFLDVPMAVPLAVFVF 326 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P GA +S + L+ +F A + + I L+PF++G +++ Sbjct: 327 LFAFVPLVGAVLSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHVLQPFILGRAVRVH 386 Query: 309 FLPTFFGL 316 L + Sbjct: 387 PLAVVLSV 394 >gi|313791669|gb|EFS39787.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|315077482|gb|EFT49542.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315107201|gb|EFT79177.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|327455112|gb|EGF01767.1| hypothetical protein HMPREF9584_01067 [Propionibacterium acnes HL092PA1] Length = 385 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 120/329 (36%), Gaps = 15/329 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV AL++ WP+ + S+ + I + ++ L + L+ ++ Sbjct: 64 VPVAVALMLTAAMWPLANWL-SRHHIHRGIASGICLLLLVILVGGVFTLVGAQIALQWRQ 122 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + V + + + +WL+ P H + Q ++ + G Sbjct: 123 LGDQSVASFKQAL---QWLAKSP----------LHTNEAQLTHLMQKAEAAMAGSQGRIA 169 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + G + ++ + A FFF +G ++++ L A ++ + Sbjct: 170 STAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKSAVLIPREHRAAILDAAKRGWVAL 229 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + I+A +GL G + G VA+G +T I+A +P GA + +L Sbjct: 230 VAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFILAFVPIVGALTAGVVAVGVVL 289 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + F A + + + I L+PFL+G + + L G+ G G++G Sbjct: 290 VTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSIHPLIVLLGIAVGAIISGIVGALF 349 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 ++A K N+ + + Sbjct: 350 AIPIVAFGVAFIKALNPETPANEVPPNHD 378 >gi|145596127|ref|YP_001160424.1| hypothetical protein Strop_3615 [Salinispora tropica CNB-440] gi|145305464|gb|ABP56046.1| protein of unknown function UPF0118 [Salinispora tropica CNB-440] Length = 412 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 117/324 (36%), Gaps = 18/324 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ A+ + +P + + + ++++ LF ++ L + + Sbjct: 106 LVPVVIAVFLAVGLYPAVARL-RRLGLPHGLAVAVVMLTLLLLFCSGVVALVPPVVTQSN 164 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + P +L + +EL ++ ++ + L + Sbjct: 165 QFIEQF----------PSYLEALQRNETVNELIERYDLVERAQQAADTDALGQALGGVLG 214 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 FG F + ++ +F + +L + I + Sbjct: 215 GAQLIFGTAFRTLTVLVLTTYFLAYF-----NRLRSLGYALVPRSRRDRVRLIGDEIIVK 269 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + + +G IIAI G +A +P AL V+ A+ +IP GA + VS+ Sbjct: 270 VGAYIVGALIIAILAGTTTFVFALIAELPYPFALAVVVAVTDLIPQIGATLGAVIVSLVG 329 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ L+ I + + + P ++ +++ + + GV +G++G Sbjct: 330 FAT-DLPVGIACVLFFLIYQQVENYLIYPKVMRRSVQVNEVAALVAALLGVALIGVVGAL 388 Query: 330 IGPVLMALIAVIWKESIMAIKENK 353 I +A +I +E ++ ++++ Sbjct: 389 IAIPTVAAFQLILREVVIPRQDSR 412 >gi|65320647|ref|ZP_00393606.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] Length = 350 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FLK F PVL A ++ + P + S + KK S + V+ LF+ Sbjct: 18 ISFVFTPFIVFLKTIFFPVLLAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFV 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + ++ L+ + R G ++L+ + + Sbjct: 77 FLVLTVIPIIKDQIDALIDNLPYFGHEIERAARRF----GESNLLGKIQENLNIDVASMV 132 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T + + + F + L+ + + LF+ +DG + Sbjct: 133 KDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQ 192 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + I S G I+++ G++L Y + G+ V L ++ I+ ++P Sbjct: 193 RQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVP 252 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ + + + + + K + P ++G + + + F Sbjct: 253 YVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFI 312 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G++G+ + A++ V+ Sbjct: 313 ILTAGNLFGIMGIILAIPGYAILKVL 338 >gi|320008818|gb|ADW03668.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 466 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 108/308 (35%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + + ++AL++ P + + V Sbjct: 87 LLVLAGTLWILMRVISAIQLVVLAFVAALLVTALLQPTVVRL-RRLGLPRGLATAVTAVL 145 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V + RWL D P + S++ + Sbjct: 146 GFVIMGLVGWFVVWQVMDNLDTLSDRVRDGIDE---LKRWLLDSPFHVTESQINDIAKNL 202 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ +E I + + ++ ++ + + F DG I Q + Sbjct: 203 SDTIGTNTEE---------ITSAGLQGVTVMVEVLTGLLLAMFSTLFLLYDGKRIWQWVL 253 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G I+A+ + + +G + VP V L V Sbjct: 254 KLVPAQARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFIF 313 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 314 LFAFIPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRVH 373 Query: 309 FLPTFFGL 316 L + Sbjct: 374 PLAVVLSV 381 >gi|88859847|ref|ZP_01134486.1| putative permease (PerM family) protein [Pseudoalteromonas tunicata D2] gi|88817841|gb|EAR27657.1| putative permease (PerM family) protein [Pseudoalteromonas tunicata D2] Length = 355 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 116/348 (33%), Gaps = 14/348 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + + + I+ LYF+ PVL A++I F WP+ +++ S + + Sbjct: 15 DPHSVTLFFVSIAIVALLYFVGSLIIPVLVAVVIAFLLEWPVQK--MTQIGSSRLTASAL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L I + + ++ + + + G +L +P + Sbjct: 73 VMLCFSSLAIASFIGIVPVLWQQLANFLQEAPHMLEKG---KAYLLQLPAQYPELITSMQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +++ F I + + + +I + + +FF +D + Sbjct: 130 IQTLVGAVENKFIEF-----GQIILSSSLTSLKDIVALLIYLILVPLLVFFMLKDKKELV 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ R + + I + G I + G V + L + LG Sbjct: 185 GGVSRLLPEQRRLL-SQVWREMHQQIMNYIRGKVIEILIVGGVSFITFALFDLRYAALLG 243 Query: 246 VITAIMAMIPG-GAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +IP GA + ++ L G + + I + L P L Sbjct: 244 ALVGFSVLIPFVGAALVTIPVAAVALFQFGLAPEFWYIIIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L +L+ + ++ Sbjct: 304 AVDLNPVYIIVAVLFFGGLWGFWGVFFAIPLASLVRALINAWSSEQEK 351 >gi|229198517|ref|ZP_04325221.1| hypothetical protein bcere0001_40450 [Bacillus cereus m1293] gi|228585020|gb|EEK43134.1| hypothetical protein bcere0001_40450 [Bacillus cereus m1293] Length = 361 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 49 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 101 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 338 SVPVLAVIRTV 348 >gi|172058148|ref|YP_001814608.1| hypothetical protein Exig_2139 [Exiguobacterium sibiricum 255-15] gi|171990669|gb|ACB61591.1| protein of unknown function UPF0118 [Exiguobacterium sibiricum 255-15] Length = 382 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 111/334 (33%), Gaps = 1/334 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F P++ A I + + I + + ++ +I + + + + + + Sbjct: 38 MLALIFPPLIIAGIFYYFTLGIVDTLQKRVKKR-GLAVLIVLLGFLGIITIAVASIGPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ + V+ + L D W + T Sbjct: 97 VDQVSDFVTSIPNLVVELRDQTLNLRDQLMNNRFISNWVHENTAMFDSWTNEATSYIGTL 156 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L ++ + L + DG+ + L + +KI Sbjct: 157 FKSVSTSVGTIFGVISSTVLIVVLVPFILVYMLLDGYKFPNSVVKLLPKSYETETRKILH 216 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ G I+++ GL+ ++++ + + L + + +IP P Sbjct: 217 DMHVTVKHYVNGQVIVSLCVGLMSLIGFFISDIQYALLLALFCTVTNIIPYLGPYIGAVP 276 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + A + + I + P++ G +K+ L L+ + G+ Sbjct: 277 AVIVGFIDDPIKALYAIITIVVAQQIESNLISPYVQGKTLKVHPLTIIIVLLVAGKIGGI 336 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G+ + A+ V+ + + ++K+ Sbjct: 337 IGVILAVPTYAVTKVVVQNIARIYRLRQQKLDVQ 370 >gi|262382754|ref|ZP_06075891.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295632|gb|EEY83563.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 385 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 133/360 (36%), Gaps = 23/360 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ + L+ P L A ++ + P F K S L+++A + Sbjct: 16 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 75 Query: 69 SVMCLFIVPLLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I L+ + E + + + + VP W ++L Sbjct: 76 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVP----------LIPHSWMEYL 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-----YCLSIIFMIIALF-FFYRDG 181 + + E K N + + + A + I + + ++I+F+I+ F F D Sbjct: 126 ESNVNFAQIMELLSKENLLKAVKQIAPQLWSILSNTFSILFSITIVFVILLYFIFILLDY 185 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ L + + + ++ V + F G ++IA+ G++L + + P Sbjct: 186 EKIANGWIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLA 245 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA------IELFIVDKT 295 V LG+ ++ +IP I + + L++ ++G I I D Sbjct: 246 VTLGLFIGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLY 305 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G + L L +G +GL I L L +K I+ + Sbjct: 306 LTPRIMGKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEDNELDP 365 >gi|163814598|ref|ZP_02205987.1| hypothetical protein COPEUT_00749 [Coprococcus eutactus ATCC 27759] gi|158450233|gb|EDP27228.1| hypothetical protein COPEUT_00749 [Coprococcus eutactus ATCC 27759] Length = 471 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 119/372 (31%), Gaps = 26/372 (6%) Query: 7 NPQGIMRWMIMFI-ILVSLYFLKGF-------------FAPVLSALIIGFTSWPIYSSFI 52 N + +R +++ +++ Y L F P + I F Sbjct: 4 NKKDTIRILLILCGVVLFAYVLFNFDKVSSLFSWLVNILMPFVIGFAIAFVVNVPMKGLE 63 Query: 53 SKKEESSTFL------AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 ++ +S +C+ V F + EM + ++ + Sbjct: 64 KVLFKNENSRLYRFKRPACLILSFLCIIAV-FTFAITMIIPEMSKTITAFADKLPDAMDD 122 Query: 107 PRW--LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR---FASRFGMIFL 161 + + + + + S+ +K G + AS F+ Sbjct: 123 IQRKAIKLMKDQPEIVDKIKSIDINWDSVISNVVGIVKNGGSSVLSSTFSIASSVVGGFV 182 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 D + I F L + L ++ + + + + + G + Sbjct: 183 DVLVGIFFACYILAQKETLEKQVKGILYAVFKEDKADRFIQTCVLADRTFSKFISGQCLE 242 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A GL+ + +P + + +I A+ A+IP +++ N A Sbjct: 243 ACILGLMFFITMTIFRIPYALTVSIIIAVFALIPVIGAFVGCFAGAIMILVENPKQAIIF 302 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + I + P +VGG + LP + ++ G MG+LG+ I L +++ + Sbjct: 303 LIIFIVLQQIEGNFIYPHVVGGSVGLPSIWVLVAVMLGGDLMGILGMLIFVPLFSVLYAM 362 Query: 342 WKESIMAIKENK 353 +E ++ K Sbjct: 363 SEEYVVKNLREK 374 >gi|306831279|ref|ZP_07464439.1| conserved hypothetical protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426515|gb|EFM29627.1| conserved hypothetical protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 372 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 122/331 (36%), Gaps = 12/331 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV---IATVSVMCLFIVPLLFLFYYG 85 F A I+ +Y ++ ++ L I+ + FI+ + +LF Sbjct: 41 PFLIGAGIAYIVNIVMS-LYEMLYTRVIKNRVLLKAKRAISMILAYLTFILLISWLFSIV 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++ ++ + GI ++ ++ EL + + + + + Sbjct: 100 LPDLISSINSLLKIDTTGIA--NFIKEVSDNKAIKELL-DYFGNSSDITSTLSDYSQQIL 156 Query: 146 IDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + L++ ++ + + +Q + L + Y +K+ Sbjct: 157 NQVLSVLTGVLTSVSTIASTVLNVFVSLVFSIYVLASKEQLGRQFNLLIDTYLGKYAEKV 216 Query: 204 ---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I+ + F+G T+ A+ G + + +L P +G++ A A+IP Sbjct: 217 HYVLDILHQRFHGFFVGQTLEAMILGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAY 276 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 277 IGATIGFILIATQSVSQAFLFLVYLIVLQQFEGNVIYPRVVGGSIGLPGMWVLMAITIGG 336 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+LG+ + L A + I K+++ ++ Sbjct: 337 ALWGILGMLVAVPLAASLYQIIKDNVAKRQQ 367 >gi|300173494|ref|YP_003772660.1| integral membrane protein [Leuconostoc gasicomitatum LMG 18811] gi|299887873|emb|CBL91841.1| Integral membrane protein [Leuconostoc gasicomitatum LMG 18811] Length = 384 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 110/325 (33%), Gaps = 7/325 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P+ + I + ++ + L + + ++ Sbjct: 56 APILIAGVLYYLLSPVVNLISKYTRLPRGISIGIILILLLAIIAGILTTVVFVLRSQVVT 115 Query: 92 LV-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + L + + Q++ S +L T Sbjct: 116 FTDNWPSYWHTSQNFINETFKSDQFNPVREFLNHTNTNINQTVIDWSRKYLTTGVAGI-- 173 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S F I ++ + L++ DG S+ + +++ + K Sbjct: 174 ---SSFASILTTVGITAVATPFILYYMLLDGHKFSEFVAEKFPPQAQQSIQQLLTDISKQ 230 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G +A ++ + L G+P + L ++ + MIP G+ I+ V Sbjct: 231 IAQYIRGQLGVAFAVMIMFSIGFTLIGLPYGILLALMAGLFNMIPYVGSIIAQVPVWTVA 290 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI G + AIE I + P ++G + + + L+ G+LG+ Sbjct: 291 LIAGGPKMLVLAIIVLAIEQPIEGHVIAPKILGEALSIHPVTVIVVLLSSGHIFGVLGII 350 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 + A++ VI M + N E Sbjct: 351 LAVPTYAVVKVIVIRIYMWWRNNSE 375 >gi|89100377|ref|ZP_01173241.1| hypothetical protein B14911_07438 [Bacillus sp. NRRL B-14911] gi|89084896|gb|EAR64033.1| hypothetical protein B14911_07438 [Bacillus sp. NRRL B-14911] Length = 375 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 116/326 (35%), Gaps = 20/326 (6%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + I F P+ + + K +I+ + + F L + E+ Sbjct: 35 PFIIGFAIAFLMNPLVNFLVRKGRMPRALAVLISLILIFAFF----AGLITLLIAEIVSG 90 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + + ++ L+ + S SL + + N + RF Sbjct: 91 ADYLAQVVPNHLETLITYAEDFFAGQLIPLYNQLTSMFNSLDTGQKDTILANIQNVGSRF 150 Query: 153 ASRFGMIFLDYCLSI--------------IFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + G + I IF ++A FF +D + +S + L A Sbjct: 151 GATAGSFIQSFFEKIPNILSWFPNAATVVIFSLLATFFISKDWYRLSILGNRLLPEKAKA 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + + K + + +++ + V + + ++T I+ +IP G Sbjct: 211 SSATVFTDLKKALFGFVKAQATLVSITAIIILIGLLILRVDYAITIALVTGIVDIIPYLG 270 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + F IY I G + A L + I L + + + P ++ I + L T L Sbjct: 271 TGLIFVPWIIYEAIAGEMSTAVGLGVLYVIVL-VQRQIMEPKVLSSSIGMDPLATLVALF 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 G +T+G LGL GPV++ +I + K Sbjct: 330 VGFKTIGFLGLIAGPVVLVIITTLHK 355 >gi|323479884|gb|ADX79323.1| conserved hypothetical protein [Enterococcus faecalis 62] Length = 381 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 40 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 99 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 153 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 213 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 273 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I I +K + + +N Sbjct: 333 LGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 366 >gi|312130597|ref|YP_003997937.1| hypothetical protein Lbys_1882 [Leadbetterella byssophila DSM 17132] gi|311907143|gb|ADQ17584.1| protein of unknown function UPF0118 [Leadbetterella byssophila DSM 17132] Length = 397 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 117/332 (35%), Gaps = 22/332 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++++ L L+ P+ AL+I P+ + + + V++ + L IV Sbjct: 33 LYLVCQILVVLEDVLVPLAFALLISILLNPVVNKLVKWRFHR-----VLSIGIALLLAIV 87 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + ++ + Q + L + Sbjct: 88 LFGSLIAFLSVQFSSFSDLIPQLEQRV-------------EVIWGDLQNWVRSNFGLSTI 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + G+D M + + +++ + I +F + ++ Sbjct: 135 EQKDIVEEGLDKGKSVVGDTLMSLMSFVSTLVLLPIYIFLILYYKPMFINFFYEVFDYKH 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ ++S G+ I G++ A L GVP V LGV+ A++ +IP Sbjct: 195 SQRVSEVLSETKSAVQSYIQGLMIETCIVGVLNSVALLLLGVPYAVLLGVVGALLNLIPY 254 Query: 257 GAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A+ + L + + + ++ FI + + P +V +++ L + Sbjct: 255 VGGLVAIALPVLLSLVTEDGLSYTTPLLIVASYSVIQFIDNNIIVPRVVSSKVEVNALIS 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G G+ G+F+ +A++ +I+ Sbjct: 315 IIVVLLGGSLWGMAGMFLSIPFVAILKIIFDR 346 >gi|308177604|ref|YP_003917010.1| hypothetical protein AARI_18230 [Arthrobacter arilaitensis Re117] gi|307745067|emb|CBT76039.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis Re117] Length = 429 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 122/353 (34%), Gaps = 15/353 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + Q ++ + +++ + L P L A+II WP+ S Sbjct: 51 RLGIRSAQLLIVGALATFLIIGMLRLTMIVIPTLLAVIISCALWPLVIKLRRVV--SPML 108 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWAS 120 A I + + + L + + E +LV + V NQ V ++ +P + S Sbjct: 109 AAWIVFLGSLLILGGIGTGLVFSVIKEWPKLVDQAVQGFNQLNEMVQGFIGTMPFNVDQS 168 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + ET A + +I +++ LFFF +D Sbjct: 169 Q-----------IDNVVETVTGFLTSSQFGTGALNTLSAAGSFVTGMILLLVILFFFLKD 217 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I S + W + G +A + L + + + VP Sbjct: 218 GDKIWAFAVSWTPRHYRNKWILSGDRALRTFGGYIRGTATVAAVDALGITATLLIVQVPL 277 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LGVI + + +P GA ++ ++ L+ A + + + L+P Sbjct: 278 AIPLGVIVFLGSFVPMVGATVAGILATLIALVTNGPVVALIVLAAVILVNQLEGNFLQPV 337 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ + L L L G G++G + L+A + K K + Sbjct: 338 VMANALSLHALVVLMALTAGTVLAGIVGAVLSVPLVAASWAVIKVWTGRDKSD 390 >gi|288905208|ref|YP_003430430.1| membrane protein [Streptococcus gallolyticus UCN34] gi|325978183|ref|YP_004287899.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731934|emb|CBI13499.1| Putative conserved membrane protein [Streptococcus gallolyticus UCN34] gi|325178111|emb|CBZ48155.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 372 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 123/331 (37%), Gaps = 12/331 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV---IATVSVMCLFIVPLLFLFYYG 85 F A I+ +Y ++ ++ L I+ + FI+ + +LF Sbjct: 41 PFLIGAGIAYIVNIVMS-LYEMLYTRVIKNRVLLKAKRAISMILAYLTFILLISWLFSIV 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++ ++ + GI ++ ++ EL+ + + + + + Sbjct: 100 LPDLISSINSLLKIDTTGIA--NFIKEVSDNKAIKELF-DYFGNSSDITSTLSDYSQQIL 156 Query: 146 IDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + L++ ++ + + +Q + L + Y +K+ Sbjct: 157 NQVLSVLTGVLTSVSTIASTVLNVFVSLVFSIYVLASKEQLGRQFNLLIDTYLGKYAEKV 216 Query: 204 ---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I+ + F+G T+ A+ G + + +L P +G++ A A+IP Sbjct: 217 HYVLDILHQRFHGFFVGQTLEAMILGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAY 276 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 277 IGATIGFILIATQSVSQAFLFLIYLIVLQQFEGNVIYPRVVGGSIGLPGMWVLMAITIGG 336 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+LG+ + L A + I K+++ ++ Sbjct: 337 ALWGILGMLVAVPLAASLYQIIKDNVAKRQQ 367 >gi|257867397|ref|ZP_05647050.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257801453|gb|EEV30383.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] Length = 418 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 113/341 (33%), Gaps = 7/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ +KK S +A I + ++ + Sbjct: 64 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLETKKIPRSASIAGIYLLILLLIVF 123 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + S L + +L + P +++ + ++ Sbjct: 124 AGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIMS 183 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + +T S +++ I FF R+ + SL Sbjct: 184 FIGDYWQTGAAGL-----SSLFSTISTLFIALFTGPIIAFFLLRNPNKFYFSVLSLVPPR 238 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 239 FRKDFNEIVKISDLQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 298 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I F L W A++L D + P ++G +K+ + Sbjct: 299 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVV-PRVMGDRLKIHPITILV 357 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ MG++G+ G + L+ V+ K+ + Sbjct: 358 VLLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQRYNR 398 >gi|225350939|ref|ZP_03741962.1| hypothetical protein BIFPSEUDO_02514 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158395|gb|EEG71637.1| hypothetical protein BIFPSEUDO_02514 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 512 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 119/358 (33%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMI-MFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 + P+ + R ++ + I +V F ++ ++ +L I P+ + Sbjct: 35 DPRKPPEWLGRALLYIAIAIVGFTFCWRSWGKIEYLVIDIIVSLFIALAVEPVVVPLVKH 94 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +F ++ + + + + V + +M LV+ + + Sbjct: 95 -GWKRSFASLFSLLMLAVMLGVLFTLFGNLFVQQMIALVNGLPDLYEQMCQ--------- 144 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 +AS+ L +L ++T+ + A + ++++ +I+ Sbjct: 145 ---FASQYANFQLPEINNLGNEILKNIQTSWVTDFAGTALNTVSGLFSFLINLMTIIMTT 201 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ G + + + + + I S I+A+ G Sbjct: 202 YYISAAGPKLRRAACQWMAPAAQRRFLFVWTVSQSQISSFLFSRAILALLNAFFTGICLM 261 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L VP + L + +++ IP G I ++ ++ A + ++ + I Sbjct: 262 LLHVPYWLPLALFCGVVSQFIPMLGTYIGGALPVLFAWGSCGLWQAVAVLVFICVYQQIE 321 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + P + + + F ++ G LG F+ ++A + I++ + Sbjct: 322 NLIFAPKISQRTMDVNDAVAFLAVLAFTSLFGALGAFLALPVVASVQTIFRTYTKRYE 379 >gi|269968742|ref|ZP_06182734.1| permease PerM, putative [Vibrio alginolyticus 40B] gi|269826636|gb|EEZ80978.1| permease PerM, putative [Vibrio alginolyticus 40B] Length = 357 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 114/350 (32%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + T +I Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKMC--RMGVPRTLSVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ L L ++ L++ + L + Sbjct: 73 VILVFVGLMLIALFGLVPTIWTQVGNLINDIPNMYNG-------LQKFIVTLPERHPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + I + +I + + +FF +D + Sbjct: 126 NLEIVETVVTNAKNQALGLGESVVKGSLASLVSIAT-LAVYLILVPLLIFFLLKDKEEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + L + L Sbjct: 185 RIASGILPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFALLDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L L I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPPFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSTEENEP 353 >gi|326799548|ref|YP_004317367.1| hypothetical protein Sph21_2142 [Sphingobacterium sp. 21] gi|326550312|gb|ADZ78697.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 358 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 118/333 (35%), Gaps = 15/333 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + + + LY K F P+ A ++ I + + ++I + + Sbjct: 8 VNKLLFLVLGIAILYVGKPFLIPITLAGVLATLFVGIAKKLEDR-GLNRALSSLIGVLLI 66 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F + L + + L + W++ G Sbjct: 67 VLAFATIIALLVWRLSDFSENLAGMQERVLALFEKLKTWINQTLG------------ISS 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + ++ G F + + + +++ F F + + Sbjct: 115 DQQAALVDKAEQSIGSSGGSGTILSFAGGTMSILVDSLLVLVYTFLFLLYRSRLKNFILK 174 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L ++ +KI V ++ G+ ++ + ++ G + + GV + + ++ + Sbjct: 175 LVDNTKKNQTEKIINKSADVSKNYLAGLALMIVMLWILYGIGFSVVGVKNALFFAILCGV 234 Query: 251 MAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + ++P I+ T++++ + G + + + F+ L P +VG + + Sbjct: 235 LEIVPFVGNITGTSLTVLATVAQGGGNDKIIGVLIVYLVVQFVQTYILEPLVVGDQVNIN 294 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T LV G G+ G+ + L+ +I +I Sbjct: 295 PLFTIIALVLGELIWGIGGMVLAIPLLGIIKII 327 >gi|152971346|ref|YP_001336455.1| putative permease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895941|ref|YP_002920677.1| putative permease [Klebsiella pneumoniae NTUH-K2044] gi|262042100|ref|ZP_06015276.1| PerM family permease [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007358|ref|ZP_08305946.1| hypothetical protein HMPREF9538_03635 [Klebsiella sp. MS 92-3] gi|150956195|gb|ABR78225.1| putative permease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548259|dbj|BAH64610.1| putative permease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040581|gb|EEW41676.1| PerM family permease [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535475|gb|EGF61941.1| hypothetical protein HMPREF9538_03635 [Klebsiella sp. MS 92-3] Length = 353 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 122/347 (35%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP + + S T Sbjct: 10 RRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVR--LERIGLSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ + LL F + ++ + + + + + +P A Sbjct: 68 WA---TSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++++ T D + +++ + L + ++ + + +FF +D Sbjct: 125 MDAGIIDAMAENMRTRMLTV-----GDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I + + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G LF I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|113461146|ref|YP_719214.1| permease [Haemophilus somnus 129PT] gi|170717731|ref|YP_001784801.1| hypothetical protein HSM_1481 [Haemophilus somnus 2336] gi|112823189|gb|ABI25278.1| permease [Haemophilus somnus 129PT] gi|168825860|gb|ACA31231.1| protein of unknown function UPF0118 [Haemophilus somnus 2336] Length = 350 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 112/341 (32%), Gaps = 11/341 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ + + I+F V++YF AP+L A+++ + K + + Sbjct: 15 DPQAMALFAILFFGFVAIYFFNSLLAPLLIAIVLAYLLEYPVRLLHEKLKLPRILATSLI 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + V L + +LVS + + WL +P + Sbjct: 75 LGGFIAITFVMTFILIPVLWAQTIKLVSDLPHMFN---QLNEWLLSLPENYPELVDYQMI 131 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + S K ++ I + + + + ++ FF +D + Sbjct: 132 DAFFISFKNKILGLGESALKLSIASLLNLVTLGIYAFLVPLMV-----FFLLKDKTELIN 186 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + K+ R + + I + G + + LV + + G+ + L V Sbjct: 187 YITNFLPK-NRTLASKVWREMQQQIANYIRGKLLEILIIALVSYAIFLFFGLNYSLLLAV 245 Query: 247 ITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + ++P GA + V++ + G L + I + L PFL Sbjct: 246 AVGLSVLVPYIGAVLVTIPVALVAMFQFGATPTFWYLMVAYVISQILDGNLLVPFLFSEA 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L L ++ G G+F L L+ + Sbjct: 306 VNLHPLTIIIAVLIFGGLWGFWGIFFAIPLATLVKAVVSSW 346 >gi|269926342|ref|YP_003322965.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] gi|269790002|gb|ACZ42143.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] Length = 354 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 122/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M Q + +++ + L Y L + A+I P + K + Sbjct: 1 MSAKQVFINTLVVLLTLAGAYLVIRLLDIIVLFVIAIIFASAISPAVAFLNRKLPLGISI 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + ++ +F L + + + LV + G + R + E Sbjct: 61 A--IVYLGIILVFAGILSLIIPTAVRQGMALV-------ESGPDMVRAVER-----QIIE 106 Query: 122 LWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L + ++L + + + + + + F+ + + +++ F++ Sbjct: 107 LQQRFNIPVENLSGDLQEYYRRLISSAPRLAAGILNVTLSFISGLGAFVAILVMAFYWLL 166 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + L + I + I + G + + G+ + G+ Sbjct: 167 ERRGVQSTWVGLASPSSRPEIRHIIDEIEAKIGAYARGQITLGLIVGIASFIGLTILGIN 226 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L +I I +IP PI ++ + + + A + L I + + L P Sbjct: 227 YAAILALIAGISELIPIVGPIVGAIPAVLIALSQSPKQAILVVLLYVIIQQMENHLLVPK 286 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ + L L F ++ G MG++G+ + + + I VI +++ +E N Sbjct: 287 IMQRSVGLSPLTVLFVVLAGGSLMGIIGVLLAVPVASAIQVILSHTLLRREETDTLYREN 346 >gi|17227738|ref|NP_484286.1| hypothetical protein alr0242 [Nostoc sp. PCC 7120] gi|17135220|dbj|BAB77766.1| alr0242 [Nostoc sp. PCC 7120] Length = 345 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 127/349 (36%), Gaps = 21/349 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVL----SALIIGFTSWPIYSSFISKKEESSTF 61 LN ++R++++ ++ L +F V+ A I+ F + Sbjct: 13 LNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQWLRRFLPH--SV 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+ + + + L+ + + + ++L+ + +P + + Sbjct: 71 AVVVVFLISIVILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIERLLSNRNL-- 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 Q + + L+T + + + ++ ++ I + + FF DG Sbjct: 129 ---------QIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNF-VTFILIAVVAFFMLLDG 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + + I+ + F G ++ + + L VP Sbjct: 179 EKLWNFILKIVPQ---KRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFA 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L VI I+ +IPG +++ +++ A + + I D + P ++ Sbjct: 236 LILSVIVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPRIM 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G + L + FF L+ G R GLLG+FI + +I +++ M + Sbjct: 296 QGSLNLNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEIDEMKSE 344 >gi|302877845|ref|YP_003846409.1| hypothetical protein Galf_0603 [Gallionella capsiferriformans ES-2] gi|302580634|gb|ADL54645.1| protein of unknown function UPF0118 [Gallionella capsiferriformans ES-2] Length = 352 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 135/346 (39%), Gaps = 9/346 (2%) Query: 11 IMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++W++ + L+ LY+L P ++A I+ + P+ + K A + V Sbjct: 8 ALQWLLFVVPALLLLYWLSPILTPFVAAAILAYICNPLVRRLVVLKLPR---AAAVVMVM 64 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + L L +LE + + V L + + L + A W L Sbjct: 65 VFLMLLFAGLLLIMLPLLEKEISLFMVRLPDLIEMLRASLLPKLQLLFGAELQWDSTLLK 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + + S G L+ ++++ + +A+F+F RDG +S + D Sbjct: 125 NWLLSHWQSA---GGVAEKLLPWLSSSGGKILNVAMNLLLIPVAMFYFLRDGGLMSAKFD 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + A +IS V +V+ G + + W G+ + +G++ Sbjct: 182 ALIPRHWHAKVCEISAEVDRVLAEFLRGQISVMLLMSAFYSLVLWAVGLEFALPIGIVAG 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKL 307 ++ IP + ++ + ++ +++WG + + P+LVG I L Sbjct: 242 MLVFIPYLGMVIGLLLATLAAVMQFSELSSVVWVWGVFGAGQMLEGTLVTPWLVGERIGL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F L+ + G G+ + + A++ V + + ++ Sbjct: 302 HPLAVIFALLAFGQLFGFFGVLLALPMSAILLVGLRHGTIWYLSSR 347 >gi|150389949|ref|YP_001319998.1| hypothetical protein Amet_2180 [Alkaliphilus metalliredigens QYMF] gi|149949811|gb|ABR48339.1| protein of unknown function UPF0118 [Alkaliphilus metalliredigens QYMF] Length = 359 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 115/307 (37%), Gaps = 6/307 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + + F PV+ + + + P+ K S ++ V ++ + I + + Sbjct: 33 IVIFQTLFIPVILSGFLFYLLRPLRDVINKKL--SKGVSILLLYVFLIFIMISLFIIIGP 90 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ L + + + R + +I + + + L Sbjct: 91 ILQRQLQSLTDNMPVIISE---IQRSVINIQESGIFQGNQLSEMLNVEEFIFQLGDLLNE 147 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G + AS G + + L +I + LF+ RDG + + ++ + I Sbjct: 148 LGKNIASNVASFIG-VLANAVLVLIIVPFILFYMLRDGERFGKSILNIFNEKQRGEVEDI 206 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + + S G I+ + G++ + + G+ + L VI + +IP P T Sbjct: 207 LKEIDTTLSSYIQGQGIVCLCVGILCYITFLIVGLDYALLLAVIAGVTNIIPYFGPWIGT 266 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + A + + + I + P ++G +K+ + F ++ R + Sbjct: 267 FPAVIVALFQSPMMALLIVVTVVVIQQIESNLIAPQVIGKKLKMHPITIMFLILVAGRLI 326 Query: 324 GLLGLFI 330 GL+G+ + Sbjct: 327 GLIGMIL 333 >gi|197121536|ref|YP_002133487.1| hypothetical protein AnaeK_1125 [Anaeromyxobacter sp. K] gi|196171385|gb|ACG72358.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 359 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 115/343 (33%), Gaps = 19/343 (5%) Query: 9 QGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + R + + + L+ + P + + P+ ++ + S T A+ Sbjct: 16 RATARALTLLAVAAGFGFLWLARDLLVPTALGATLALSVHPVVAALERR-GLSRTLAAIA 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + L + + + ++ + A+ L + Sbjct: 75 GTLLTVAV----LAAIGWVLWDRIAAFAQELPGYEGRLREAAAGIRR-----HAAHLQAQ 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q+ + E ++ L ++ L+F +G Sbjct: 126 SEQLVQAPRRPGEVKVQETVPW--GTLLVGTAQGALTLAGQATVVVFVLYFTLAEGPRFR 183 Query: 186 QQLDSLGEHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +L + + + ++ + + + + L + G+V + Y L G+ Sbjct: 184 VKLLAWADRRPRGRARLLAALEELHRDVEQYMLNRVALNAILGVVTWAVYALYGLEHAAI 243 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+ TA++ IP G A F ++ LL G + + + + + + P + Sbjct: 244 WGITTALLHFIPYVGPALGLFLPTAMALLQYGTAKDVALVAAIYLVLVNVQGNVVDPLFL 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G ++L L F G + G +GLF+ L++ + ++ + Sbjct: 304 GKQLRLSPLVVFLGSLFWFWLWGPVGLFLAVPLLSTVRIVCRH 346 >gi|262192246|ref|ZP_06050403.1| permease PerM [Vibrio cholerae CT 5369-93] gi|262031856|gb|EEY50437.1| permease PerM [Vibrio cholerae CT 5369-93] Length = 354 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 121/349 (34%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T +I Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTLAVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQ---KFITSLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 126 HLEIVESVISNAKNKVLGMGESVVKGSLASL-ISLATLAVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGILPR-NRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYAVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +WK +E Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEP 352 >gi|254390206|ref|ZP_05005425.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|197703912|gb|EDY49724.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 469 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 104/308 (33%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V SAL+I P + + + + ++ Sbjct: 131 LLVLAGTLWVLMRVISAVQLVVLAFASALLITALLQPTVARLL-RIGLPRGLATAVTAIA 189 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V Q + W + P + ++ + Sbjct: 190 GFAVMALVGWFVVWQVMENLDTLSDRVREGIQE---LRLWALEGPFHVSEGQINDLADNL 246 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ +E I + +++ + + + F DG I Q Sbjct: 247 SDTIGSNTEE---------ITSAGLQGVTALMEFLAGALLAMFSTLFLLHDGPRIWQWTL 297 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + G ++A+ + + +G W VP V L V Sbjct: 298 KLVPAQARPGVASAGPRAWATLTAYVRGTVLVALIDAIFIGLGIWFLDVPMAVPLAVFVF 357 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P GA +S + L+ +F A + + I L+PF++G +++ Sbjct: 358 LFAFVPLVGAVLSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHVLQPFILGRAVRVH 417 Query: 309 FLPTFFGL 316 L + Sbjct: 418 PLAVVLSV 425 >gi|256390449|ref|YP_003112013.1| hypothetical protein Caci_1247 [Catenulispora acidiphila DSM 44928] gi|256356675|gb|ACU70172.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 388 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 102/330 (30%), Gaps = 16/330 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + AL++ P ++ + I ++ + LF ++ + + Sbjct: 58 IVMITMALVLAAGLNPFVEMLTAR-GFHRRWAVTIVALAALGLFAGFIVVIAKPLTDQTS 116 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV V + + + + + + Sbjct: 117 SLVHNGVPDGLKKLQENSTIQRLDKKYHLITKLQNWFT-------------TADTTKTLA 163 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A FG L +++ +F +++ L ++ V Sbjct: 164 GGAFGFGKAVLTSVFKAFTILMLTLYFLGSLPAMTSGGLKLVPRSRRERAADLTDRVLNR 223 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G +++ L A L GV + L ++ + +IP GA + Sbjct: 224 IGGYVSGALVVSTCATLASWLAMSLIGVRFALPLALLVGLTDLIPIIGATFGAFIACTVI 283 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG-L 328 L+ + F A ++ + + + + P ++ + LP + G +G+ G L Sbjct: 284 LLLDSPFKALAALIFFVLYQQLENYLIYPRVMSRTVDLPPAVAVIAALAGYAILGVSGAL 343 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 P+ L+ ++ + + A + E ++ Sbjct: 344 LFIPLTAGLLVIVRQIVLPAQDRDPEAPTT 373 >gi|300914210|ref|ZP_07131526.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X561] gi|300889145|gb|EFK84291.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X561] Length = 358 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 127/352 (36%), Gaps = 20/352 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKE 56 + I + ++F+I+ + L F +P + +I + P+ K Sbjct: 16 DKMQIKKTYLLFLIIGATGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPM-----VKFF 70 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S F ++ + V + +LF +Y + L+++ + Q + + Sbjct: 71 NSKGFSISLSILLVFLIVASGILFFSFYIV---PLLINEFIALLQMIPFYAEEIQKLLIQ 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + L +L + N + A + + L + II + I F+ Sbjct: 128 LKFNYL--SYLPPQVEKVLDKNLGSLNNAFTYHIDSAFKSVITILKDAVDIIIIPIVTFY 185 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +D ++++ + + + I + + K++ I+ + L Sbjct: 186 FLKDKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLI 245 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V +GV+ I+ +IP PI ++ + + ++ + + + + + Sbjct: 246 KVKYAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFI 305 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P ++ + L + F L+ G G+ GL + ++A+I I E + Sbjct: 306 TPKIMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIEIFIE 357 >gi|297192363|ref|ZP_06909761.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723035|gb|EDY66943.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 457 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 112/319 (35%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V ++AL++ P + + + + Sbjct: 89 LLVLAGTLWVLMRVISAVQLVVLAFVAALLVTAMLQPTVARLC-RLGLPRGLATAVTAIL 147 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V + RWL D P + S++ + Sbjct: 148 GFVIMGLVGWFVVWQVMDNLDNLSDRVRDGIDE---LKRWLLDSPFHVTESQINDIAQNL 204 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ +E I + + ++ I+ + + F DG + + Sbjct: 205 SDTIGTNTEE---------ITSAGLQGVSVMVEVLTGILLAMFSTLFLLYDGKRVWLWVL 255 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G + VP V L V Sbjct: 256 KLVPAQARPGVAGAGPRAWRTLTAYVRGTVVVALIDAIFIGLGIYFLDVPLAVPLAVFIF 315 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 316 LFAFIPLVGAVVSGALAVVVGLVTQGVFTALMVLVVVLAVQQIEGHVLQPFILGRAVRVH 375 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 376 PLAVVLAVASGGLVAGIGG 394 >gi|229543742|ref|ZP_04432802.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] gi|229328162|gb|EEN93837.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] Length = 363 Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 11/308 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+L I + P+ +A + + LF + Y G+ + Sbjct: 45 PLLIGGFIAYILHPLVEFLYKNGLPR-----GLAILIIYILFFGGTAYGVYRGLPLV--- 96 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + N +P++ G+ + KH +I + Sbjct: 97 ---IAQMNDLSEHLPQFADQYRDGVVYLQTSMKHWPDGLQDQIDERIERFELWLSANVSN 153 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + M ++Y +++ + F+ +D + + +L + R V + I Sbjct: 154 SINMLMQLVNYAIALAVIPFISFYLLKDFEHVKKAALALTPEKWRPSAAAFIRDVDRSIG 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G + + G + A+ + G+ + LG+I + +IP P+ + Sbjct: 214 GYLRGQLLDCLLIGFLSFVAFAILGMKYPILLGIIIGVTNVIPYFGPVLGAIPVSVIAAT 273 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 ++ + + + FI L PF+VG + L L L+ G G+ GL + Sbjct: 274 ISLKFVLYVVIIVFVLQFIESNILSPFIVGKSLHLHPLFIIIALIAGEEIAGIAGLILAV 333 Query: 333 VLMALIAV 340 +A++ V Sbjct: 334 PALAVLKV 341 >gi|324328293|gb|ADY23553.1| membrane protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 355 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 43 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 95 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPILAVIRTV 342 >gi|326803671|ref|YP_004321489.1| putative ATP synthase F0, A subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326650153|gb|AEA00336.1| putative ATP synthase F0, A subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 414 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 125/336 (37%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F++ P++ A + + S P+ + F+ K+ +S ++A I + ++ + + Sbjct: 59 IAFVFTPIIEFIQTIILPIIFAGVFYYLSSPLIN-FLRKRGLNSYWIAGIVLLVLVLIIL 117 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ + E K L+ + + +I G W + + + Sbjct: 118 WLISFI-PNLIDEAKHLIGN---WSNIWTQYQTEIENIIFGRWFERSQETLAEYLNNFNL 173 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F ++ + ++++ I LF+ DG S Sbjct: 174 NQFNFNWRELMNTTLSSIGSVFGVITRVIIALVTAPIILFYLIADGEKFRDNFASFIPVK 233 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + I + G +AI ++ Y + G+ L V+ + +IP Sbjct: 234 IRNKTMRLLADMNQQISAYVRGQIFVAIAVAVMFAIGYAIIGLNYGTILAVVAGALNVIP 293 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 S+ + + + + + AIE I + + P ++G + + + Sbjct: 294 YVGSFFGILPSLIVGLVQDPLMVIKVLIVFAIEQTIESRIISPLILGSNLNIHPITIMLL 353 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G G++G+ I + A++ VI+ +E Sbjct: 354 LIAGGDLFGVVGIIIIIPVYAVLKVIFTYIFEWYRE 389 >gi|227486234|ref|ZP_03916550.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227235865|gb|EEI85880.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 405 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 113/338 (33%), Gaps = 8/338 (2%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ F A II S F K + ++ + + L I L+ L Sbjct: 39 YLVIQPFILGGALAFIISIPMNFFESEFAHFDKTGKHKKIISTCSLLLSWILVIASLVIL 98 Query: 82 FYYGMLEMKEL-VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--LKILSE 138 + + ++ + + + R L P + + ++ Sbjct: 99 INILVPSIVKVVYTFSIRWPDFVDEIYRLLKKYPITEPFANKFQNTFYGVGWYNVRNAVY 158 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF-YRDGFSI--SQQLDSLGEHL 195 TFL+ D AS G I + ++F Y+ I + L +L Sbjct: 159 TFLQGRKGDIFSTAASLMGSISSGVIGVFTMFVFSIFILIYKRMLKINGIRILYALMSEE 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 Y K+ + + I I ++ ++ +P+ + ++ + +IP Sbjct: 219 RADYINKVFSLSYNTFKDYLFSRVIAVICLSILTFVGMFVMRLPNAAMISIVVGLSDLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI TA S L+ + + + I I + + P + G I LP + Sbjct: 279 IFGPIFGTAFSTILIFIESPVKSLIFLAYSLIIQQIQENVIYPAIAGNKIGLPAVWVMAS 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+ G+ + ++++I + E I + E K Sbjct: 339 VTIGGSLFGVWGMLVSIPVVSVIYTLSHEKIHHMLEEK 376 >gi|188990769|ref|YP_001902779.1| Putative permease (PerM) family protein [Xanthomonas campestris pv. campestris str. B100] gi|167732529|emb|CAP50723.1| Putative permease (PerM) family protein [Xanthomonas campestris pv. campestris] Length = 388 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 124/330 (37%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S + + ++ L ++ L+ Sbjct: 25 VLWVVSLLSPILTPFVLALLLAWLGDPLVDRIERA-GRSRNMAVTLVFILMVLLVVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMMERQIMTLIDALPQMRDWAIG-----TAIPWLERRTGVELMGWLDPERLIEWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGVAKTFFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRMVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 +++ V+ G ++ + G + + + G+ + +G+I ++ IP Sbjct: 199 GTVSRLALESNDVLGGFIRGQFLVMLALGAIYATGLSIIGLNLGLLIGIIAGFISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGFDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|138896299|ref|YP_001126752.1| hypothetical protein GTNG_2662 [Geobacillus thermodenitrificans NG80-2] gi|134267812|gb|ABO68007.1| Membrane protein, putative [Geobacillus thermodenitrificans NG80-2] Length = 320 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 102/307 (33%), Gaps = 12/307 (3%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 K + + + + ++ L + + L V Q I Sbjct: 1 MERKTKMPRWLAVSVTLIVLFAAVAGIVILLIAEIVSGTQYLADVVPEKFQALIAYMESF 60 Query: 111 SD---IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-- 165 + IP + L+ + Q + + + T + F R Sbjct: 61 AANQLIPLYQDLAVLFKSLNDNQQDTIMQNIQAVGTQIATTVGEFIQRVLQNIPQLLAWL 120 Query: 166 -----SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 IF ++A FF +D + + + K + + + + Sbjct: 121 PNAATVFIFSLLATFFISKDWHRLMRMIQQWLPAKARTSGKTVFLDLKRALFGFIKAQAT 180 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNAT 279 + +++ + V + + +I + ++P G I F IY + G+I A Sbjct: 181 LISITTVIVLIGLLILRVDYAITIALIIGFVDILPYLGTGIVFVPWIIYAAVSGDIPFAI 240 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L + I + + + + P ++ I L L T L G + +G LGL GPV++ +I Sbjct: 241 GLGVLY-IVVLVQRQIMEPKVLSSSIGLDPLATLIALFVGFKLLGFLGLIAGPVILVIIR 299 Query: 340 VIWKESI 346 + ++ Sbjct: 300 TLHSANV 306 >gi|52081223|ref|YP_080014.1| hypothetical protein BL02034 [Bacillus licheniformis ATCC 14580] gi|52786604|ref|YP_092433.1| YrrI [Bacillus licheniformis ATCC 14580] gi|319644809|ref|ZP_07999042.1| YrrI protein [Bacillus sp. BT1B_CT2] gi|52004434|gb|AAU24376.1| conserved protein YrrI [Bacillus licheniformis ATCC 14580] gi|52349106|gb|AAU41740.1| YrrI [Bacillus licheniformis ATCC 14580] gi|317392618|gb|EFV73412.1| YrrI protein [Bacillus sp. BT1B_CT2] Length = 352 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 117/328 (35%), Gaps = 17/328 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 LK P+ A+ I + P+ T+S++ ++ + L Y Sbjct: 38 LLKSILIPLAIAVFITYLLLPVVEKIHRAGVPR--------TLSILLIYFLFFAGLGYAF 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN- 144 + L+ ++ ++ + ++ +L P + + F+ Sbjct: 90 YKGVPILIKQLTELSEGIPVLAASYENM-----LDQLHHHTDGWPDGMHDRVDRFVNQTE 144 Query: 145 --GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ R DY L + +F+ +D ++ + + L + A + Sbjct: 145 EFVASWVERTIRSI-RFVFDYMLLAAIIPFLVFYMVKDIDTMKKAVWYLTPSSWRARGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G + + GL ++W +P + LG++ +IP P+ Sbjct: 204 FIRDVDDSLGDYIRGQLFVCLVIGLGASLSFWFFDLPYPLILGLVIGATNVIPYFGPVIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + I FI L P +VG + + + GL+ G Sbjct: 264 AIPAVMVAAALSTRLVFVVIITILILQFIEGNILGPLVVGKSLHMHPVVIMLGLLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ + +MA+I V+ + A K Sbjct: 324 AGIIGMILAVPVMAVIKVMLVHFLAARK 351 >gi|21232218|ref|NP_638135.1| permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767653|ref|YP_242415.1| permease [Xanthomonas campestris pv. campestris str. 8004] gi|21113976|gb|AAM42059.1| permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572985|gb|AAY48395.1| permease [Xanthomonas campestris pv. campestris str. 8004] Length = 388 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 124/330 (37%), Gaps = 12/330 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + L P + AL++ + P+ S + + ++ L ++ L+ Sbjct: 25 VLWVVSLLSPILTPFVLALLLAWLGDPLVDRIERA-GRSRNMAVTLVFILMVLLVVLALM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L+ + I + IP + + P+ L + Sbjct: 84 ILVPMMERQIMTLIDALPQMRDWAIG-----TAIPWLQRRTGVELMGWLDPERLIEWIRS 138 Query: 140 FLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G + SR G + + +++ + I F+F RD + +++ ++ + Sbjct: 139 HWEQAGGVAKTFFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRMVERVAAVIPRAYI 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-- 255 +++ V+ G ++ + G + + + G+ + +G+I ++ IP Sbjct: 199 GTVSRLALESNDVLGGFIRGQFLVMLALGAIYATGLSIIGLNLGLLIGIIAGFISFIPYL 258 Query: 256 -GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I ++ + +G ++ + + + + L P +VG I L + Sbjct: 259 GATTGIVLALLAAIVQAQGFDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVI 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G + G LG+ + + A+ V+ + Sbjct: 319 FAVMAGGQLFGFLGMLLALPVAAVANVLLR 348 >gi|220913074|ref|YP_002488383.1| hypothetical protein Achl_2329 [Arthrobacter chlorophenolicus A6] gi|219859952|gb|ACL40294.1| protein of unknown function UPF0118 [Arthrobacter chlorophenolicus A6] Length = 436 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +++AL I P+ ++K + +++ ++ + L + ++ E+V Sbjct: 128 IVAALFIALGLEPVVKWLENRKIPRPAGI-LMSVAVLILAVVGFFATLIPTIVQQVTEIV 186 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + P W+ D L + + L++ N + I Sbjct: 187 QQA----------PTWVRDFMNSDLFRTLDDQFGVRDRIADELNKFVNDPNAMGGIAGGV 236 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 FG + + +++ +F ++ + L + +S + K + + Sbjct: 237 VGFGSTVANGLFGALIVLVLSLYFLAALPAMKKWGYRLAPRSRRHRVEALSDAITKSVGN 296 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G +A+ + G+P + L + A++A IP + V + + + Sbjct: 297 YVIGQACVALLNATFAFIVMSIVGIPFALLLAFVVALLAFIPLVGAMIAGVVVVLIALTV 356 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + L + P ++ + +P ++ G +G+LG I Sbjct: 357 GWQTAAIYAICYFAYLQFEAYFISPRIMQKAVAVPGAVAVISVIAGGSLLGVLGALIAIP 416 Query: 334 LMALIAVIWKESIMAIKENK 353 A I ++ KE + ++ Sbjct: 417 TAAAILLLIKEIYIVRQDQH 436 >gi|239827828|ref|YP_002950452.1| hypothetical protein GWCH70_2491 [Geobacillus sp. WCH70] gi|239808121|gb|ACS25186.1| protein of unknown function UPF0118 [Geobacillus sp. WCH70] Length = 353 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 100/302 (33%), Gaps = 15/302 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A I + P+ K + A ++ ++ + + Y + Sbjct: 43 LIPFFIAAFITYLLHPLVEYIHEK--GIPRWAA------ILFIYFLFFGGIGYGLYKGIP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT--NGIDF 148 + ++ ++ + + W ++ + + P + E L Sbjct: 95 LFIQQLKDLSESLPALIETYRN-----WTKQIHNQTSAWPMEIHTRIEAMLIQLEQTAAN 149 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 ++ + + + +F+ +D + + + + + + V Sbjct: 150 ALTMVINGVKGIVNSAMLFLLIPFIVFYMLKDIDQLKKAVWYITPKRWREPGIAFLKDVE 209 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + + G + + G V W+AG+ + LG I +IP P+ + ++ Sbjct: 210 ESLGNYIRGQLFVGLLIGSVAAFLLWIAGMDYPLLLGFIIGATNIIPYFGPVIGSIPAVI 269 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L ++ + + + F+ L P +VG + + L F L G G+LGL Sbjct: 270 LAATVSLKMVLIVAVIIFLLQFLEGNILSPLIVGKSLHMHPLAIMFALFFGGEIAGVLGL 329 Query: 329 FI 330 + Sbjct: 330 IV 331 >gi|295399322|ref|ZP_06809304.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|312110117|ref|YP_003988433.1| hypothetical protein GY4MC1_1010 [Geobacillus sp. Y4.1MC1] gi|294978788|gb|EFG54384.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|311215218|gb|ADP73822.1| protein of unknown function UPF0118 [Geobacillus sp. Y4.1MC1] Length = 353 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 101/302 (33%), Gaps = 15/302 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P S K ++++ ++ + + Y + Sbjct: 43 LIPFVIAAFITYLLHPFVESIHEKGIPR--------WMAILLIYFLFFGGIGYGFYKGIP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ ++ ++ + + W ++ + + P + ET + Sbjct: 95 LLIQQLKDLSESLPALTETYRN-----WTKQIHNETSAWPLEIHTRIETMIVQLEQTAAN 149 Query: 151 RFASRF--GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + ++ L + + +F+ +D + + + + + + V Sbjct: 150 ALTAVINGVKGIVNSALLFLLIPFIVFYMLKDIEQLKKAVWYMTPKRWRQPGLAFLKDVD 209 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + S G + G V A W+AG+ + LG I +IP PI S+ Sbjct: 210 ESLGSYIRGQLFVGFIIGTVAALALWIAGMDYPLLLGFIIGATNIIPYFGPIIGAVPSVI 269 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L ++ + F+ L P +VG + + L F L G G+LGL Sbjct: 270 LAATVSLKMVLVVSAIIFFLQFLEGNILSPLIVGKSLHMHPLVIMFALFAGGEIAGVLGL 329 Query: 329 FI 330 + Sbjct: 330 IV 331 >gi|15613829|ref|NP_242132.1| hypothetical protein BH1266 [Bacillus halodurans C-125] gi|10173882|dbj|BAB04985.1| BH1266 [Bacillus halodurans C-125] Length = 358 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 116/320 (36%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +Y LK P+ A II + P+ + + ++ +++ L + + Sbjct: 36 FVYVLKRLLIPLGLAAIITYLFHPLIEAMHRR-GMGRGLAVLLVFGAMIALLVCFAVVGA 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 Y + +++EL + P + D+ G + E + L HP + + Sbjct: 95 PYVLQQIEELTTSF----------PTVMKDVEGTVSKMEWQIQQLPHPFHNQAENWLNHL 144 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R ++ + + +I + + +F +D I + + + K+ Sbjct: 145 GKKAGNLLGQMERVIVVLIQSMVLLITVPFLVLYFLKDFDLIERAAWYVTPRKWRPSLKR 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++A+ +V A WL GVP + LG +IP Sbjct: 205 YVRDVDRSFGRYIRGQLLVALSVAVVSMMALWLIGVPYPILLGGFIGATNIIPYFGAFIG 264 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + L P +VG + L + L+ GV Sbjct: 265 AVPALVFAYFESWPVLLATAIALFLLQQLEGNVLSPLIVGHSLHLHPITIILALLVGVEV 324 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL + ++A++ V + Sbjct: 325 GGVIGLILAVPILAVLKVTF 344 >gi|320170312|gb|EFW47211.1| hypothetical protein CAOG_05155 [Capsaspora owczarzaki ATCC 30864] Length = 1229 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 69/192 (35%), Gaps = 5/192 (2%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A +++ +S + + +L++ + L + L + +S + Sbjct: 975 NIALSVVSFMVNFGVSFVIFLSSLYYLLIAEHDVISALFNKLVMLDQHWKTNVSTRLSTS 1034 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 + F A + ++ + G+ ++ A A++P + + + L Sbjct: 1035 VTQVFSASLKTAAFHAIFTWLSFSVLGLDLVYISSLLAAFFALVPFVPSYLVSLIGFVQL 1094 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L + L I ++VD P ++ T ++ G+ L G+ Sbjct: 1095 LFDDYFWTGVFLVGAHLIVSWVVD----PEILTEIKHAHPYITGLSILLGLYAFDLPGVV 1150 Query: 330 IGPVLMALIAVI 341 IGP+L+ ++ +I Sbjct: 1151 IGPLLVCVVQLI 1162 >gi|296446894|ref|ZP_06888830.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296255569|gb|EFH02660.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 386 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 108/336 (32%), Gaps = 16/336 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L Q + + L+ +Y + AP ++ L +G+ P+ S ++ Sbjct: 17 TLERQLAFWAAAIALFLLFVYTVSAVLAPFVAGLALGYLLDPVADRLQRA-GFSRLGASL 75 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + F ++ + V + + +S G +A ++ Sbjct: 76 CILTVFLSIVTAVVFFAAPILTHQLSDFVVSLPGYLTTLQGLIARISREATGDFARSVYE 135 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRF------GMIFLDYCLSIIFMIIALFFFY 178 K + ++ + A+ G ++ ++ + F+ Sbjct: 136 KLGLSTADAPSEVQKYVNDITAEATRMAAAFVKSLVSGGAALVNMAALVVITPVVAFYIL 195 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ LD L + I+R + + + G ++ + GL L GV Sbjct: 196 LDWDNMVATLDQLVPPRHREDIRFIARGIDRALAGFVRGQALVCLFLGLWYSIGLSLLGV 255 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI------FNATCLFLWGAIELFIV 292 +GV I++ +P I+ +SI + A L G Sbjct: 256 NFGFLIGVSAGILSFVPYVGSITAFVLSIVVATVQGWPDWSLPAEAVALVCAGLFLDG-- 313 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L P LVGG I + + F L+ G G+ Sbjct: 314 -NVLSPRLVGGSIGVHPVWLMFALLAAGSLFGFTGM 348 >gi|229141127|ref|ZP_04269669.1| hypothetical protein bcere0013_42210 [Bacillus cereus BDRD-ST26] gi|228642405|gb|EEK98694.1| hypothetical protein bcere0013_42210 [Bacillus cereus BDRD-ST26] Length = 361 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 49 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 101 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFIGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 338 SVPVLAVIRTV 348 >gi|163733469|ref|ZP_02140912.1| hypothetical protein RLO149_17498 [Roseobacter litoralis Och 149] gi|161393257|gb|EDQ17583.1| hypothetical protein RLO149_17498 [Roseobacter litoralis Och 149] Length = 355 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 123/328 (37%), Gaps = 16/328 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++LV+L FL P + I + P+ + S I T+ M +F + Sbjct: 17 AVLLVALMFLGDVLLPFVLGGAIAYFLDPVADRLE-RLGLSRVAATAIITLCGMMVFFIV 75 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHLSHPQSLKIL 136 L + + + +LV+ P + +I + S Q Sbjct: 76 ALLVIPALVEQAVKLVN----------VAPEYARNITAFLTERFPTLLDEDSAMQRSLHS 125 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ G + + S + L +I ++A+ + D +++ ++DSL Sbjct: 126 LGETIQSRGAELLETALSSAASLLNVLILLVIVPVVAV-YLLLDWDNMTAKIDSLLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ + +V+ S GM + + G A LAG+ + +G I ++ IP Sbjct: 185 APTIRQLASQIDQVLASFIRGMGTVCLILGTYYAIALMLAGLQFGLVVGFIAGLVTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A++I L + G+ + + A+ + + P LVG + L + Sbjct: 245 LGALIGGALAIGLALFQFWGDWVSVGIIAGIFALGQVLEGNVITPKLVGNSVGLHPVWLL 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G +G+ + + A + V+ Sbjct: 305 LALSVFGALFGFVGMLVAVPVAAALGVV 332 >gi|310828610|ref|YP_003960967.1| Predicted permease [Eubacterium limosum KIST612] gi|308740344|gb|ADO38004.1| Predicted permease [Eubacterium limosum KIST612] Length = 402 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 90/260 (34%), Gaps = 4/260 (1%) Query: 105 PVPRWLSDIPGG-MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR---FASRFGMIF 160 V W + + G ++ ++ + FL+ + F+ AS Sbjct: 125 QVEEWATGLAGSYPDIAKQISEITIDWTNFGSEIVDFLQKGLMSFVGSTFNVASSIASGV 184 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 +++ L IF + L + G + + ++ R+ S G Sbjct: 185 VNFSLGFIFALYVLLQKEKLGSQFRKLFYAYLPERVTDKLLEVFRLSNSTFSSFVTGQCT 244 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A+ G + + +P + +GV+ +++IP V +L++ N A Sbjct: 245 EAVILGAMFVVVMLIFRLPYALMIGVLIGFLSLIPIFGAFIGCFVGAFLILMVNPMQAFW 304 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + I I + P +VGG + LP + + G MG+ G+ I L ++ Sbjct: 305 FIVIFLIIQQIEGNLIYPHVVGGSVGLPSIWVLVAVTIGGGAMGITGMIITIPLCSVCYT 364 Query: 341 IWKESIMAIKENKEKISSNF 360 + +E+ + + Sbjct: 365 LLREATGKRLSRRRVPEEKY 384 >gi|288555382|ref|YP_003427317.1| putative autoinducer export protein AI-2E [Bacillus pseudofirmus OF4] gi|288546542|gb|ADC50425.1| putative autoinducer export protein AI-2E [Bacillus pseudofirmus OF4] Length = 354 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 90/245 (36%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + +P+ +++I + + + L P + I + Sbjct: 98 IEQVQHAMTVLPQQITEIEKMIIQIQTQARALPSPIRVHINEWSTQAGVLGAKALDQIEV 157 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + + S++ + +F+F +D I + L + K+ ++ V S Sbjct: 158 LALWLIQSIFSLMVVPFLVFYFLKDFDLIEKVSWYLTPRKWRPGLKRYAKDVDHSFGSYI 217 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 G ++A+ ++ +WL GVP + LGV MIP +I + + + Sbjct: 218 RGQLLVALAVTIISSLGFWLIGVPYPILLGVFMGATEMIPYFGAYIGAVPAIIIALFESW 277 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A + I I L P +VG + L + LV G+ G++GL + + Sbjct: 278 QLALITAGFILILQQIEGNILSPVIVGKTLHLHPILIILALVIGIEAGGVIGLLLAVPAL 337 Query: 336 ALIAV 340 A++ V Sbjct: 338 AILKV 342 >gi|239979662|ref|ZP_04702186.1| integral membrane protein [Streptomyces albus J1074] Length = 481 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 103/307 (33%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSV 70 + ++ +L+ L V + A I + + + + + V Sbjct: 112 LLVLAGTLWVLMKVIVSVQLVVFAFIAALLVTALLQPTVTALRRMGMPRGAATAVTAVLG 171 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + L S+V + WL + P + ++ + Sbjct: 172 FVIMGLVGWFVVWQVMENIDTLASQVQDGIDE---LRGWLLNSPFHVTEDQINDIAKTLR 228 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ +E + ++ ++ + + F DG I + + Sbjct: 229 DAVGTNTEELTSAGLEGV---------TVLVEVLTGMVLAMFSTLFLLYDGKRIWRWTLN 279 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + G ++A+ + + +G W VP V L V + Sbjct: 280 LVPAQARPGIAGAGPRAWRTLTAYVRGTVMVALIDAIFIGLGLWFLDVPMAVPLAVFIFL 339 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 340 FAFIPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRVHP 399 Query: 310 LPTFFGL 316 L + Sbjct: 400 LAVVLSV 406 >gi|167589269|ref|ZP_02381657.1| hypothetical protein BuboB_28291 [Burkholderia ubonensis Bu] Length = 119 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 74/118 (62%) Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G AY LAGVP LG++TAI AM+P API F +++L ++G A + G + + Sbjct: 2 GIAYVLAGVPHAALLGLVTAIAAMLPFCAPIVFCGAALWLFVQGATAWAVAVAATGFVVV 61 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 F+ + +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ ++W E + Sbjct: 62 FVAEHFVRPVLIGSSARLPFLLVLFGILGGAETFGLLGLFIGPALMTVLTMLWAEWVA 119 >gi|125975677|ref|YP_001039587.1| hypothetical protein Cthe_3199 [Clostridium thermocellum ATCC 27405] gi|281416685|ref|ZP_06247705.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] gi|125715902|gb|ABN54394.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] gi|281408087|gb|EFB38345.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] Length = 349 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 122/321 (38%), Gaps = 9/321 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PVL +I + PI SK S T ++ + L ++F+ + + Sbjct: 35 IFPVLLGAVIAYILRPIVLKLESK-NISRTKSIIMIYLVFGILLTTAVIFIAPIFVDNTR 93 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 E ++ V + ++G + L I W++E+ + + ++E L + Sbjct: 94 EFINTVPEITTEYGEKFNKILKMIDTSGWSAEVKNAIYNEINNGVNIAENMLMDALRKTL 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 I +II +I ++ +D + SL + R + + Sbjct: 154 VWLFKSLTGIS-----NIILGMIIAYYIMKDAEFFKKGALSLVPRRWRNEIIGTCREINE 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ G + A+ G++ A + GV LG I I +IP P S+ + Sbjct: 209 ILSCFIQGQLLTALIIGIMETVALAIIGVKYSPILGFIGGISNIIPYFGPFIGAIPSVAV 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + A + + + +D + P ++ G + L + T ++ G G++G+ Sbjct: 269 ALIDSPVKA-FWTVVAFLVVQQIDNAFISPKIIEGRLGLHPITTILAVLAGGEFFGIIGM 327 Query: 329 FIGPVLMALIAVIWKESIMAI 349 + + A++ VI K I AI Sbjct: 328 LVAVPVTAVLKVILKRLIEAI 348 >gi|261209892|ref|ZP_05924193.1| permease PerM [Vibrio sp. RC341] gi|260841078|gb|EEX67603.1| permease PerM [Vibrio sp. RC341] Length = 358 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 122/355 (34%), Gaps = 14/355 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T +I Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTLAVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V L + + E+ Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITTLPERFPELAHLEIVES 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ ++ + + + + A+ + +I + + +FF +D + Sbjct: 133 VINNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGILPR-NRKLATKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPPFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L L+ +WK +E ++ S Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPNKESYS 358 >gi|171779330|ref|ZP_02920294.1| hypothetical protein STRINF_01175 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281947|gb|EDT47378.1| hypothetical protein STRINF_01175 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 371 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 127/335 (37%), Gaps = 14/335 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA---VIATVSVMCLFIVPLLFLFYY 84 + F A I+ +Y ++ ++ L ++ +S FI+ + +LF Sbjct: 40 QPFLIGAGIAYIVNIVMS-LYEMIFTRLIKNKYLLKVKRAVSMISAYLTFILLISWLFSI 98 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ ++ ++ + GI + ++D + +L S+ L Sbjct: 99 VLPDLIASINSLLKIDTSGIANFIKEVNDNKVVKDVLAYFGTSSDVTTTLSDYSQQILNQ 158 Query: 144 NGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I S L+ +S++F I L +S+Q + L + Y K Sbjct: 159 VLSVLTSILTSVSTIASTLLNVFISLVFSIYVL----ASKEQLSRQFNLLIDSYLGKYAK 214 Query: 202 KI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + I+ + F+G T+ A+ G + L +P +G++ A A+IP Sbjct: 215 TVHYVLDILHQRFHGFFVGQTLEAMILGSLTAGGMLLLHLPYAATIGILVAFTALIPVVG 274 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L+ ++ A ++ + + P +VGG I LP + + Sbjct: 275 AYIGLTIGFILIATQSVSQAIFFVIYLVVLQQFEGNLIYPRVVGGSIGLPGMWVLMAITI 334 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+LG+ + L A + I K+++ +EN+ Sbjct: 335 GAALWGVLGMLVAVPLAASLYQIIKDNVAKRQENR 369 >gi|237713414|ref|ZP_04543895.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406786|ref|ZP_06083335.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646015|ref|ZP_06723680.1| membrane family protein [Bacteroides ovatus SD CC 2a] gi|294806044|ref|ZP_06764904.1| membrane family protein [Bacteroides xylanisolvens SD CC 1b] gi|229446653|gb|EEO52444.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355489|gb|EEZ04580.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638586|gb|EFF56939.1| membrane family protein [Bacteroides ovatus SD CC 2a] gi|294446763|gb|EFG15370.1| membrane family protein [Bacteroides xylanisolvens SD CC 1b] gi|295084671|emb|CBK66194.1| Predicted permease [Bacteroides xylanisolvens XB1A] Length = 377 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 123/334 (36%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ ++LSE + Sbjct: 87 --VPPMISEIGRMNDLLVTYLTNGAGNNVPKSLSEFIHENIDLQALNRVLSEENILAAIK 144 Query: 147 DFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D +I++ L + + + + Sbjct: 145 DTVPRVWTLLAESLNILFSILASFIILLYVIFILL-DYEAIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|261345963|ref|ZP_05973607.1| permease, PerM family [Providencia rustigianii DSM 4541] gi|282566051|gb|EFB71586.1| permease, PerM family [Providencia rustigianii DSM 4541] Length = 360 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 113/355 (31%), Gaps = 18/355 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + + ++ I + ++F AP+L A++ + WP + + + S Sbjct: 10 RRRFADPQAVALFSLLVIGFLVIFFFSSILAPLLVAIVFAYLLEWPTH--LLQRIGLSRV 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + +L + + LV+ + + +P A Sbjct: 68 LSVSIILTLFAGISAMVILIIAPTAWQQGMNLVADLP---NMVTRFSEFAQKLPEQYPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + ++ + + +FF +D Sbjct: 125 VDAGIIDMMADNIRSRLSNVADSVVKASVASLIG-----IFTLAIYLVLVPLMIFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 IS+ L K+ + + I + G + G+ + + Sbjct: 180 KERISKSFLKLLPR-NRLLVSKVWLEMNQQITNYLRGKVTEMVIVGVCTYIGFAYFDLRY 238 Query: 241 HVALGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V L V+ + +IP A I V+++ G+ F + L + + + + Sbjct: 239 SVLLSVLVGVSVLIPYIGAVAATIPVVLVALFQWGVGSEFWS--LLIVYLVIQGLDSNIV 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P L + L L +V G G+F L LI + + + Sbjct: 297 VPLLYSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVINAWPQDVND 351 >gi|194447650|ref|YP_002046556.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200386480|ref|ZP_03213092.1| permease PerM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205360471|ref|ZP_02683443.2| permease PerM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194405954|gb|ACF66173.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199603578|gb|EDZ02123.1| permease PerM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205349638|gb|EDZ36269.1| permease PerM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 362 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 17 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 75 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 76 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 135 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 136 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 186 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 187 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 246 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 306 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 352 >gi|165933552|ref|YP_001650341.1| permease [Rickettsia rickettsii str. Iowa] gi|165908639|gb|ABY72935.1| permease [Rickettsia rickettsii str. Iowa] Length = 356 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 122/355 (34%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++N I + + + + + P A II + P SK + S+ Sbjct: 1 MRKIIMNRTVIFWLVFLGLFISGFMLISDAIKPFFIAFIISYLLQPAIGFIASKFKISNK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + I + + +F + L L ++ ++ + N + +P M Sbjct: 61 FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R+ +I ++ + + + I LF+F RD Sbjct: 116 YSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + SL I + ++ + G I + A+ + G+ Sbjct: 176 WAKIIANMKSLLPIKTRPKILAILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDL 235 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG++T + +IP + I L G + + + P Sbjct: 236 ALLLGILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G I L L F + G++G+F + + ++ I K ++ Sbjct: 296 KIIGDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSQ 350 >gi|290956980|ref|YP_003488162.1| hypothetical protein SCAB_24961 [Streptomyces scabiei 87.22] gi|260646506|emb|CBG69603.1| putative membrane protein [Streptomyces scabiei 87.22] Length = 427 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 119/357 (33%), Gaps = 22/357 (6%) Query: 8 PQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M++ + L++++ L G +L A + P S SK Sbjct: 2 PRWLPRAMVLALSLIAVFQFGSWAFHQLIGLLVNILIAFFLALAIEPAVSWMASK-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F + + +F++ L+ + L L +++ + + + Sbjct: 61 GFASFL-------VFLITLIGAAGFVTLLGSMLAGQIIKMVEDFPAYLDSVISWINTSFH 113 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +EL + + +++ + + A G +F ++ + + F+F Sbjct: 114 TELRRVDIQEGLLRSDWLQKYVQNSATGVLDVSAQVLGGLF-----QLLTIALFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G VP Sbjct: 169 DGPRLRRALCSVLPPSKQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLEYLDVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + N + A + ++ I + L+P Sbjct: 229 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G I +A + + + Sbjct: 289 KLTAKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|261340788|ref|ZP_05968646.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] gi|288317212|gb|EFC56150.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] Length = 354 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 118/347 (34%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWP-TARLENIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AT V+ LF+ LL + + M + + + + LSD + Sbjct: 69 -----ATSIVLVLFVGILLLMAFVVM---PVAWQQGIYLIRDMPGMLNKLSDFAATLPRR 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + T G D + +++ + L + ++ + + +FF +D Sbjct: 121 YPALMDAGIIDAMAENMRARIMTMG-DSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + I G+ + + G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWEEMNQQITNYIRGKVLEMIVVGVATWIGFVIFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQGLDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|257387204|ref|YP_003176977.1| hypothetical protein Hmuk_1144 [Halomicrobium mukohataei DSM 12286] gi|257169511|gb|ACV47270.1| protein of unknown function UPF0118 [Halomicrobium mukohataei DSM 12286] Length = 341 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 127/363 (34%), Gaps = 29/363 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M M QG++ ++ L+++ L V A+ + + +P+ + + Sbjct: 1 MYCGMRRRQGVLVGLVAATGLLTIVLLWSVVTTVFFAITVAYVLYPLRRLLVERGTHRRI 60 Query: 61 FLAVIATVSVMCL--FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A +V+ + + IVPLL+ + + +L +P Sbjct: 61 AAAAATSVAFLAVAALIVPLLW-----------------SLYRRRDTLLAYLRTLPTSFE 103 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L SL + + ++ + A G L + + ++ Sbjct: 104 FEVLGMPFGFEVGSLAATARVAITNLAVE-VAGSAPIIG-------LKLFLFTLLVYALL 155 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + + + + + + ++ A+G L+ + G Sbjct: 156 LRPSAAPAVVFRAVPEEYQSLVRTMHERTRNTLYAIYVLQGATALGTFLIAYLVFAGLGY 215 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTL 296 P L + I+ +P G I V+ ++ G++ A L + G + + F+ D + Sbjct: 216 PGAFGLAAVAGILQFVPVVGPSILIAVVAATDVVAGDLTGAATLLVIGLVFVGFLPDAII 275 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 RP L +P F G GGV ++G++G GP+++AL + + ++ Sbjct: 276 RPQLAPYTADIPASLYFIGFTGGVLSIGIVGFIAGPLVVALFVEAVELLTNERPTVQRQL 335 Query: 357 SSN 359 S Sbjct: 336 DSE 338 >gi|226311488|ref|YP_002771382.1| hypothetical protein BBR47_19010 [Brevibacillus brevis NBRC 100599] gi|226094436|dbj|BAH42878.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 354 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 120/341 (35%), Gaps = 15/341 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W++ ++ +K PV+ L+I + PI ++ ++V+ + Sbjct: 27 WLLRPVLSQLFSLIKEVLVPVILGLVIAYLLHPIVQLLEKRRVPR--------LMAVLLI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + +L + + + ++V + + W W SE + P S+ Sbjct: 79 YGSFVLVITIAIINAIPVFTKQLVELSDDIPRLMDW-----YYTWMSEWEARKYFLPDSI 133 Query: 134 KILSETFLKTNGIDFIPRFASRF--GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + + + + F+F +D + + S+ Sbjct: 134 SKGVDRVIIQSNEGMSHSVSKIVDNAKHSMGKLFAFAIVPFIAFYFLKDMKQLHETGMSI 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + R + + + G ++A+ G+ YW G+P L + Sbjct: 194 VPKAYRKQVLIVLRDINESLGKYIHGQMMVALIVGVFAYLGYWWIGMPYPFVLAAFVCLT 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P+ A ++ + I + + + I + L P +VG + L L Sbjct: 254 NIIPYIGPLIGAAPAVVIAITISTKTLLLVVVVNLIIQIVEGNILSPNIVGRSLHLHPLL 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ G G++GL + ++A+ VI + + E+ Sbjct: 314 IILALLVGETVGGIIGLIVAVPILAVCKVIVSRIAVMMHES 354 >gi|166031304|ref|ZP_02234133.1| hypothetical protein DORFOR_00991 [Dorea formicigenerans ATCC 27755] gi|166028709|gb|EDR47466.1| hypothetical protein DORFOR_00991 [Dorea formicigenerans ATCC 27755] Length = 386 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 111/329 (33%), Gaps = 13/329 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESS--------TFLAVIATVSVMCLFIVPLLFLF 82 P L I F + ++ +SV+C+ + L + Sbjct: 42 IFPFLLGGAIAFVLNVPMNFIERHLFTEKVRKNKVADKLARPVSLLSVLCIVVGVLTVVI 101 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMW-ASELWTKHLSHPQSLKILSETF 140 + + ++ + + IP + W ++ G EL + F Sbjct: 102 FGVVPQLVNTFGNLGQSITQFIPHAQAWGKEVFHGNKEVVELINSVQFDWDKIVETLIDF 161 Query: 141 LKTNGIDFI---PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK + + A + ++ +F I L + G + L + Sbjct: 162 LKNGAGNMLNSTLTAAKSIISGVSTFVIAFVFAIYILLQKKKLGIQAKKVLFAFVRRGRA 221 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++S + S G + A+ G + A + +P + +G+ A A+IP Sbjct: 222 EAVVEVSSLTYSTFSSFLTGQCLEAVILGSMFVLAMTIFRLPYALLVGIFIAFTALIPIF 281 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 AV +L+ + A + + I + P +VG + LP + + Sbjct: 282 GAFLGCAVGAFLIFMVDPMKALMFIVLFLVLQQIEGNLIYPHVVGNSVGLPSIWVLAAVS 341 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G MG++G+ I ++++ +++E + Sbjct: 342 IGGSLMGVVGMLIFIPIVSVAYALFREIV 370 >gi|325290370|ref|YP_004266551.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] gi|324965771|gb|ADY56550.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] Length = 369 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 122/324 (37%), Gaps = 9/324 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F+P + +I F P+ + +++A ++ L I+ ++ E+ Sbjct: 52 FSPFILGIIFAFLMEPLVQKLCRNFRIKRVYSSILALSCIVFLMILLMIIAGNRLYHELA 111 Query: 91 ELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHL-SHPQSLKILSETFLKTNGIDF 148 +L + ++ + V + +I + + L S Q + ++ +K I Sbjct: 112 DLTAAFPGLYENNMAFVGNQIDNIEKYIRLNPEIQNALKSSSQEIFSYAQVAVKNGSIGL 171 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + I+ ++++ ++ + + + + ++ + Sbjct: 172 L-----NILGSLPGFLVVIMVLVVSTLLTSISYPAVKEWFFRRFKEPLASKTRIVAAELG 226 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSI 267 + +I+ LV+ + + G LG++T +M ++P G + F +I Sbjct: 227 SALIGFLRAESILLSVTSLVVITGLLIIGNEYAFTLGLLTGLMDLLPVIGPGVIFIPWAI 286 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I I A + A ++ + L P ++ I L LPT + G+ +G G Sbjct: 287 IVFISSGIGPALKILAVYA-AATVIRQILEPKIMSHNIGLHPLPTLISMYVGLNLLGAAG 345 Query: 328 LFIGPVLMALIAVIWKESIMAIKE 351 + +GP ++ + K + KE Sbjct: 346 IILGPTVIVIYEACRKAGLFNRKE 369 >gi|260174265|ref|ZP_05760677.1| putative permease [Bacteroides sp. D2] gi|293370047|ref|ZP_06616614.1| membrane family protein [Bacteroides ovatus SD CMC 3f] gi|299147768|ref|ZP_07040831.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|315922536|ref|ZP_07918776.1| conserved hypothetical protein [Bacteroides sp. D2] gi|292634965|gb|EFF53487.1| membrane family protein [Bacteroides ovatus SD CMC 3f] gi|298513951|gb|EFI37837.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|313696411|gb|EFS33246.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 377 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 123/334 (36%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ ++LSE + Sbjct: 87 --VPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEENILAAIK 144 Query: 147 DFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D +I++ L + + + + Sbjct: 145 DTVPRVWTLLAESLNILFSILASFIILLYVIFILL-DYEAIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|126433854|ref|YP_001069545.1| hypothetical protein Mjls_1252 [Mycobacterium sp. JLS] gi|126233654|gb|ABN97054.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 376 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 14/301 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ ALI+ WP K AV+ + V + L+ ++E Sbjct: 49 LLPVVLALIVCTVLWPPVRWLRGK--GVPPAAAVLLILLVALGLLSGLVAAVAPAIVEQS 106 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 A + V WL P + ++L + + L S I Sbjct: 107 T--ELAQQATAGVVQVRDWLGGPPLDISEAQLDSAVTAITDRLNSSSAQ---------IA 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ I+ FF +DG L + + ++ V Sbjct: 156 SGVFTGVGAATSALVTAFTAIVVTFFLLKDGPRFIPWLRRTVGNPAAPHVAEVLERVWST 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + ++++ + +++G+ + GVP AL +IT I +P GA ++ + Sbjct: 216 LGGFIRTQALVSLVDAVLIGAGLVILGVPLAYALAIITFIGGFVPIVGAFVAGGLAVLIA 275 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ +A + + L+P+L +KL + + G T G++G F Sbjct: 276 LVSNGPVDALIVLGIILAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGASTFGVIGAF 335 Query: 330 I 330 + Sbjct: 336 L 336 >gi|306829383|ref|ZP_07462573.1| membrane protein [Streptococcus mitis ATCC 6249] gi|304428469|gb|EFM31559.1| membrane protein [Streptococcus mitis ATCC 6249] Length = 369 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 113/342 (33%), Gaps = 8/342 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 II + + P L + + PI + + + + ++ +++ +V + Sbjct: 30 IITPFVTVINTIMIPFLLGGFFYYLTNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + L D+ + + ++ ++ Sbjct: 90 VYLLPILINQLTSLIISSQN-------IYSRLQDLVIDLSMNPIFQNIDIQKTIQQLNLS 142 Query: 139 TF-LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG L+ Sbjct: 143 YVDILQNILNSVSNSLGSVLSALFSTILILIMTPVFLIYFLLDGNKFLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + G+ I A+ G + Y + G+ + + + I +IP Sbjct: 203 LNLTSLLKNLNATVARYISGIAIDAVIIGCLAYVGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMIIANVFTDPQRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++G+ + +++ I K + +KE Sbjct: 323 LSSNIYGVIGMVVAVPSYSILKEITKFFAKLYENHKEAKEQE 364 >gi|160937037|ref|ZP_02084400.1| hypothetical protein CLOBOL_01926 [Clostridium bolteae ATCC BAA-613] gi|158439938|gb|EDP17686.1| hypothetical protein CLOBOL_01926 [Clostridium bolteae ATCC BAA-613] Length = 397 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 104/327 (31%), Gaps = 8/327 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFI---SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F A I+ I V+ + V + + + Sbjct: 41 IVWPFILGAAIAFILNVPMRNIERHLTVFGQGSRLRRPVSLVVTILLVTGGLFLVIFVVA 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L S + + L E + + Q + FLK Sbjct: 101 PQLVKTFMNLQSSIPVFFAGVRDEAERLFA--SNPQILEYMNQMEVNWQEVFQNMVAFLK 158 Query: 143 TNGIDFIPRF---ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + A + + IF I L G I + L++ Sbjct: 159 SGAGTMLNTTFSAAVSIVSGVSSFLIGFIFAIYILLQKETLGRQIKKVLEAFLPEPAVGR 218 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I+ + + G A+ G + + +P + +GV+ A A+IP Sbjct: 219 ILDITALTERTFSHFLTGQCAEAVILGTMFFVVLTVIRLPYALLIGVLIAFTALIPIFGA 278 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 AV ++L++ N +A + + I + P++VG + LP + + G Sbjct: 279 FVGLAVGVFLMLLVNPMDALIFTITFFVLQQIEGNLIYPYVVGNSVGLPSIWVLVAVTVG 338 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 MG++G+ I L +++ + ++ + Sbjct: 339 GSMMGIVGMLIFIPLCSVLYALLRDGV 365 >gi|331092554|ref|ZP_08341375.1| hypothetical protein HMPREF9477_02018 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400666|gb|EGG80272.1| hypothetical protein HMPREF9477_02018 [Lachnospiraceae bacterium 2_1_46FAA] Length = 383 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 109/336 (32%), Gaps = 14/336 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESST---------FLAVIATVSVMCLFIVPLLFL 81 P L I F K + T I+ V + + + Sbjct: 42 ILPFLIGAAIAFVLNVPMHFIEEKVFGNKTAKSSKFLQKIARPISLVMTLLFVFGIVCLV 101 Query: 82 FYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + E+ ++ + Q IP V +W DI W ++L I Sbjct: 102 VFIVAPELANTIAGLGKTIQTFIPEVQKWAEDIFHNNKEILSWIQNLEFNWDKMIAGGID 161 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +G + + + I + ++ Q+ LG P W Sbjct: 162 FFKSGAGSVLDSTFAVAKSIVSGMTTFAIAFIFACYILLQKEKLNVQVKKLGYAFIPRDW 221 Query: 201 KKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +I + + TF G + AI G + A + +P + +GV+ A A+IP Sbjct: 222 VEILIAISSMAYKTFSNFLTGQCVEAIILGSMFFVAMTIFNMPYALLVGVLIAFTALIPI 281 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 A+ L++ N A + + I + P +VG + LP + + Sbjct: 282 FGAFIGCAIGAILILMVNPVQALGFLVLFFVLQQIEGNLIYPHVVGNSVGLPSIWVLVAV 341 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G MG++G+ + + +++ + K + E Sbjct: 342 SVGGSLMGIVGMLVFIPISSVVYTLLKGIVNRRLER 377 >gi|296110438|ref|YP_003620819.1| transport protein [Leuconostoc kimchii IMSNU 11154] gi|295831969|gb|ADG39850.1| transport protein [Leuconostoc kimchii IMSNU 11154] Length = 388 Score = 83.3 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 101/325 (31%), Gaps = 7/325 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P + + ++ + + ++ Sbjct: 56 APILIAGVLYYLLSPAVKFISKYTRLPRNLSIGLILILLLAAAGGIITLVVLVLRSQVVT 115 Query: 92 LV-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + + L + Q++ S +L + Sbjct: 116 FIDNWPGYWHTSQRFINETFKSSQFAPVREFLNNTNTDINQNMIDWSRKYLTSGVAGI-- 173 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S F ++ + L++ DG S + +++ + K Sbjct: 174 ---SSFASTLTTVGITAVATPFILYYMLLDGHKFSGFIAEKFPPKAKHSLQELLSDISKQ 230 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I G +A ++ + + G+P + L ++ MIP G+ I+ V Sbjct: 231 IAQYIRGQLGVAFAVTIMFSIGFTIIGLPYGILLALMAGFFNMIPYVGSIIAQVPVWTVA 290 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI G + AIE I + P ++G + + + L+ G+LG+ Sbjct: 291 LIAGGPKLLLLAIIVLAIEQPIEGHVIAPKILGEALSIHPVTVIVVLLSSGHIFGVLGVI 350 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 + A+ VI + N + Sbjct: 351 LAVPTYAVAKVIVTRLFTWWRANSD 375 >gi|295397406|ref|ZP_06807494.1| permease [Aerococcus viridans ATCC 11563] gi|294974353|gb|EFG50092.1| permease [Aerococcus viridans ATCC 11563] Length = 371 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 116/330 (35%), Gaps = 6/330 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P++ A + + PI + +++ + V+ + LL + + + Sbjct: 45 LLPLIVAGFLYYMFDPIVVFLEERGGVPRVIGFLLSFIVVVFAGALILLNVVPEMVEQTT 104 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL + + + RWL+++ E +L + LS L G+ Sbjct: 105 ELTQNLPIYAEET---GRWLNEL---SNKEEFKNLNLVEQLNSANLSINNLIRVGVINAT 158 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S +++ + + + L F ++DG S + ++ R + + Sbjct: 159 TGLSLIVGFAMNFLVLLFTVPFILVFMFKDGHSFLDAVSKFFPLTIRKELRQTVRELNET 218 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + + A G++ A + P + L + + +IP P ++ + Sbjct: 219 LSAYISSTVLDAFIVGILSFLAMMIFKQPYGLLLAIFCGVANIIPYVGPFIGAVPAVIVG 278 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + L + + ++P L G + + L L+G G+LG+ I Sbjct: 279 LFISPLQALYMGLSILVIQQLDGNLIKPLLFGKSMNIHPLTIILLLIGAGSIAGILGMLI 338 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSNF 360 + A+I + + K++ + Sbjct: 339 CIPVYAVIKTLIINIHKIYQIQKKRNLQEY 368 >gi|290968827|ref|ZP_06560364.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] gi|290781123|gb|EFD93714.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] Length = 359 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 122/342 (35%), Gaps = 14/342 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESS 59 + Q +R ++ + ++ + + P++ +LI F PI K Sbjct: 5 KDTQFWLRTALVILAVLLFISIHAVYWPLVVSLIFTFILIPIRDGLRYLVYGICKCRLPE 64 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + V ++ + + + ++ L + + L + ++ Sbjct: 65 NLAIGFSFVILILILACVANVILRPLLYQLNLLAANFNTIVLQMSVLVNHLENDQTHVYI 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + ++ TN + + A + + F+F + Sbjct: 125 PEQVKQLINEALVKAGNYGVDSITNVVKSVVVIAGT--------VVEFCVVPFITFYFMK 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q S+ + + I+ + +V+ G I++ V+ W+ GVP Sbjct: 177 DGAHLVQSFISIFPPTYRPRLEGIAGEIHRVLSRYIRGQIILSCIIAGVIFCGMWIMGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +G++ AI IP PI +I L + A + ++ I + + P Sbjct: 237 YPMVIGLLAAITEWIPIVGPIVGAVPAILLGATVSGSLALKVLIFYVIVQQMDSHVIMPQ 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++G I+L + L+ G MG+ G+ + + A++ ++ Sbjct: 297 VMGAVIRLHPVVIIISLLIGGTLMGVAGMILTVPITAVLQIL 338 >gi|261409447|ref|YP_003245688.1| hypothetical protein GYMC10_5674 [Paenibacillus sp. Y412MC10] gi|261285910|gb|ACX67881.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 359 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 105/305 (34%), Gaps = 9/305 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI L F P++ + + P+ +K S ++++ L+ Sbjct: 26 LVDFIFRPVLSFFSIILVPLMLSGFFYYLLRPLVDLLEKRKLNRS--------LAILLLY 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +V L + + L ++V Q+ + L + + + + + Sbjct: 78 VVFAGILTGFILGVWPSLRDQIVALVQNAPALFAKLGEQLQELENNGFFQDIFPENANPL 137 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +L G F+ + ++ + + I L++ ++G + + S Sbjct: 138 TQLTDYL-NQGFTFLTNYIMNLFSFVSNFAIVLFTFPILLYYMLKEGGKFGKMVVSFLPD 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + + ++ +G ++ + G+++ + + G+P + L V+ I I Sbjct: 197 RFKGEGASVLDEINNALKGFIVGRVLVNLALGVLMYIGFLIIGLPYALLLTVVAVIANFI 256 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + A + I D + P++ G + + + Sbjct: 257 PFIGAILSAIPIVIIGFIQSPGTAIWSLVVILAAQQIQDNLIGPYIFGKQLAIHPITIII 316 Query: 315 GLVGG 319 ++ G Sbjct: 317 LVLVG 321 >gi|269101993|ref|ZP_06154690.1| permease PerM [Photobacterium damselae subsp. damselae CIP 102761] gi|268161891|gb|EEZ40387.1| permease PerM [Photobacterium damselae subsp. damselae CIP 102761] Length = 359 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 119/339 (35%), Gaps = 14/339 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + MI+ +++YF AP+L A+++ + WP+ +++ T + Sbjct: 15 DPHAVSLVMILLGGFLTIYFFGHLIAPLLVAIVLAYLLEWPVMR--LNRLGMPRTIAVAV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V L ++ + L ++ L++ V ++S +P Sbjct: 73 VLVLFAGLMVMAIFGLVPTIWHQVSNLLADVPNMFNG---FQNYISSLP-----ERYPEF 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 H + + + + + + + + + +I + + +FF +D + Sbjct: 125 VQPHQVGMFMDTLKGKVLGLGESVVKGSLSSLVSLATLGVYLILVPLLVFFLLKDKEEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L K+ + + I + G G+V + L G+ V LG Sbjct: 185 NMLRGLLPK-NRRLASKVGVEMNEQISNYIRGKVTEIFIVGIVSYITFVLLGLQYAVLLG 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA V++ L + G L + I + L P L Sbjct: 244 VLVGLSVLIPYIGAAAVTVPVAMVALFQWGLTPEFWWLLVAYGIIQALDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|50955276|ref|YP_062564.1| integral membrane protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951758|gb|AAT89459.1| integral membrane protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 413 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 119/319 (37%), Gaps = 14/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ PVL A+++G P I + + ++++ + L + Sbjct: 74 LRLIVIPVLIAVLLGALLVPFKELLIRHRWP-VWLAILTTLLTLIVVVGGLLSLAIWQVT 132 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +L ++ V A WL+ P G+ +++ + + S++ S+ F+ Sbjct: 133 RQSHDLQTQSVAAYDG---FRAWLTTGPLGLSEAQIASGLDTLWTSIQQDSQVFVSG--- 186 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 A G ++ + ++ F DG I + + R Sbjct: 187 ------ALSLGSTLGHVLAGVLLTLFSVLFILIDGKGIWAWIVRVFPRSARGAIDNAGRA 240 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 +R+ ++A + L +G + G+P + + V+ + + IP + A++ Sbjct: 241 GWTTLRNFVKVQILVASIDALGIGLGAFFLGLPLVIPIAVLVFLGSFIPIVGAVVTGALA 300 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +++ L+ A + + I L+P ++G +K+ L + GG G+ Sbjct: 301 VFVALVFKGWVFAVIMLAVVLLVQQIEGHVLQPLIMGTAVKVHPLAVVLAVAGGSLLAGI 360 Query: 326 LGLFIGPVLMALIAVIWKE 344 G L+A++ V+ + Sbjct: 361 PGALFAVPLVAVLNVMVND 379 >gi|154252605|ref|YP_001413429.1| hypothetical protein Plav_2158 [Parvibaculum lavamentivorans DS-1] gi|154156555|gb|ABS63772.1| protein of unknown function UPF0118 [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 129/353 (36%), Gaps = 34/353 (9%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ + + + + IL + Y + AP+ +A++ F P+ + + + Sbjct: 31 RARIMRAETALAILAVLAILYTAYLAQNLVAPITAAVVGSFIFMPLMRAAPLRFLPDALS 90 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++I + L Y + E P W + IP + E Sbjct: 91 ASIIVATLIGAL------AGSVYLLAE----------------PAAEWTARIPAAIEEFE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIP---------RFASRFGMIFLDYCLSIIFMII 172 ++ LS P + + ++ ++ + SI+ I+ Sbjct: 129 EKSRELSEPMAAMRRASKQVEEMTRADDAPREVVVRDEGLVAQAMEVAGQKGASILIFIV 188 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L+F G + ++ + L ++I R + + I + +++I G G+ +G Sbjct: 189 LLYFLLATGELLRDRIIRSAKRLTDKERARRILRSIEREISTYLFSISLINAGLGVAIGL 248 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIEL 289 + W G+P+ + G A++ IP ++ A++ ++ ++ +A + Sbjct: 249 SMWAIGLPNALLWGFAAALLNFIPYAGALAGMALTGFVAFMTFDSVGHALLAPAAYFLCN 308 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I + + P ++G L F +V G++G + ++ ++ + Sbjct: 309 LIESQFVTPSVLGRRHTLNAAVVFISIVFWGWMWGVIGAVLAVPILVILNTCF 361 >gi|331677559|ref|ZP_08378234.1| putative permease [Escherichia coli H591] gi|331074019|gb|EGI45339.1| putative permease [Escherichia coli H591] Length = 181 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 2/157 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 FI+P+ L + L+ K + + +P WL+ IP G W L + Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGT 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + + A+ G + L ++ Sbjct: 137 AIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLL 173 >gi|83954041|ref|ZP_00962761.1| membrane protein [Sulfitobacter sp. NAS-14.1] gi|83841078|gb|EAP80248.1| membrane protein [Sulfitobacter sp. NAS-14.1] Length = 359 Score = 83.3 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 116/340 (34%), Gaps = 18/340 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I LV L+F P L I + P+ + S ++ T+ + +F++ Sbjct: 17 AIFLVFLWFTGNVLLPFLIGAAIAYFLDPVADRLEA-MGLSRAMATMVITLVALLIFVLM 75 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L + + + L ++ + +E + L +L+ Sbjct: 76 ALLVIPTLINQAVNLFEVAPELTRNFT------------NFLTERFPALLDEGSTLRSSI 123 Query: 138 ETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T + A L+ + + + + + D + Q+D L Sbjct: 124 NSIGSTIQERGGEVLNTAISSAASLLNVMVLFVIVPVVAVYLLLDWDRMVAQIDRLLPRD 183 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++++R + + + GM + + G A L G+ + +G I ++ IP Sbjct: 184 HAPVIRRLARDIDRTLAGFIRGMGTVCLILGAYYAIALMLVGLQFGLVVGFIAGLVTFIP 243 Query: 256 GGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A++I L + G+ F+ + + I L P LVG + L + Sbjct: 244 YLGAVLGGALAIGLALFQFWGDWFSIGMVAGIFVLGQMIEGNFLTPKLVGNSVGLHPVWL 303 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +G+ + A + VI + + E+ Sbjct: 304 ILALSVFGSLFGFVGMLAAVPIAAALGVIARFATEQYVES 343 >gi|256003588|ref|ZP_05428577.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] gi|255992379|gb|EEU02472.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] gi|316939792|gb|ADU73826.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 1313] Length = 349 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 122/321 (38%), Gaps = 9/321 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PVL +I + PI SK S T ++ + L ++F+ + + Sbjct: 35 IFPVLLGAVIAYILRPIVLKLESK-NISRTKSIIMIYLVFGILLTTAVIFIAPIFVDNTR 93 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 E ++ V + ++G + L I W++E+ + + ++E L + Sbjct: 94 EFINTVPEITTEYGEKFNKILKMIDTSGWSAEVKNAIYNEINNGVNIAENMLMDALRKTL 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 I +II +I ++ +D + SL + R + + Sbjct: 154 VWLFKSLTGIS-----NIILGMIIAYYIMKDAEFFKKGALSLVPRRWRNEIIGTCREINE 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ G + A+ G++ A + GV LG I I +IP P S+ + Sbjct: 209 ILSCFIQGQLLTALIIGIMETVALAIIGVKYSPILGFIGGISNIIPYFGPFIGAIPSVAV 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + A + + + +D + P ++ G + L + T ++ G G++G+ Sbjct: 269 ALIDSPVKA-FWTVVAFLVIQQIDNAFISPKIIEGRLGLHPITTILAVLAGGEFFGIIGM 327 Query: 329 FIGPVLMALIAVIWKESIMAI 349 + + A++ VI K I AI Sbjct: 328 LVAVPVTAVLKVILKRLIEAI 348 >gi|325479702|gb|EGC82792.1| putative membrane protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 402 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 110/343 (32%), Gaps = 16/343 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------STFLAVIATVSVMCLFIVP 77 L + F + A I+ ++ I+ + ++C+ ++ Sbjct: 39 LLVFQPFIIGAMIAYIVSIPMNYFERKLSENFPDAKHKKKIRGLSLFISWIIILCVVVLF 98 Query: 78 LLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L + + + + + ++ P E L+ Sbjct: 99 LNILVPRIITVIISFFNRWPEFVRETYEALNKYDLTKPFADKFYEYVNSF--SWFELRNR 156 Query: 137 SETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI--SQQLDSL 191 FL N + + + G ++ +F I L Y+D + ++ + +L Sbjct: 157 VLDFLSGNKSNILSVTTNVINSVGSSLVNIFTIFVFSIFVL--IYKDMLKVNGTKIMYAL 214 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 Y K+ + + I + + ++ +P+ + + + Sbjct: 215 LSEKKADYLNKVFSLSYHTFKDYIFSRLIAVVTLSTLTFIGMFIMRMPNAGVISIFIGVS 274 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP PI +S ++ + A ++ I I + + P + G I LP + Sbjct: 275 DLIPIFGPIVGAGLSAVIIFLESPVKALIFLIYDVIVQQIQENIIYPAIAGEKIGLPAVW 334 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G+ + + ++I ++ E I E K Sbjct: 335 VLASITIGGSLFGIWGMLVSIPVASIIYTLFHEYIDNRLEKKN 377 >gi|288929635|ref|ZP_06423479.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329140|gb|EFC67727.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] Length = 371 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 136/373 (36%), Gaps = 23/373 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW++ +I+ +++F+ P A ++ + +P+ Sbjct: 1 MLEEKITLDKLIRWVVCGLIIFAVFFITNSMSEVLLPFFVACLLAYLLYPLVKFTEKYLH 60 Query: 57 ES-STFLAVIATVSVMCLFIVPLLFLFYYGMLE---MKELVSKVVLANQHGIPVPRWLSD 112 T + + ++ L L + + + + EL ++ + +++ + ++ Sbjct: 61 IRIRTLSILFVLLVLVGLITGVGLLVVPSLIDQFDKISELAARYLGSSKSSGDLSGYIQH 120 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 W E +S + + + + + C+++++M Sbjct: 121 -----WLREHQEDIDRLIRSKDFNDAVRTAMPKLFSLLGQTASVVVSIVASCITLLYM-- 173 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 FF D ++ + + +W ++++ + + + G ++++ G++ Sbjct: 174 --FFILLDYEFLTDNWVRIFPKKYRPFWNELAQDASRELNNYIRGQGLVSLIMGIMFCIG 231 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P + +G++ +M ++P + + L+ G F L A Sbjct: 232 FTIIDFPMAIGMGILIGVMNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFGTAILVFA 291 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D + P ++G + L L +G +G+ I L LI W+ + Sbjct: 292 VVQIISDMVVTPRVMGKAMGLNPAIILLSLSVWGSLLGFIGVIIALPLTTLIIAYWQRYV 351 Query: 347 MAIKENKEKISSN 359 K + E ++ Sbjct: 352 TKEKVDVEPETTE 364 >gi|254228422|ref|ZP_04921848.1| domain of unknown function, putative [Vibrio sp. Ex25] gi|262393563|ref|YP_003285417.1| permease PerM [Vibrio sp. Ex25] gi|151939010|gb|EDN57842.1| domain of unknown function, putative [Vibrio sp. Ex25] gi|262337157|gb|ACY50952.1| permease PerM [Vibrio sp. Ex25] Length = 357 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 115/350 (32%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + T +I Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKMC--RMGVPRTLSVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ L L ++ L++ + L + Sbjct: 73 VILMFVGLMLIALFGLVPTIWTQVGNLINDIPNMYNG-------LQKFIVTLPERHPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + I + +I + + +FF +D + Sbjct: 126 NLEIVETVVTNAKNQALGLGESVVKGSLASLVSIAT-LAVYLILVPLLIFFLLKDKEEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + L Sbjct: 185 RIASGVLPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + + L L I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLAPPFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSTEENEP 353 >gi|194471851|ref|ZP_03077835.1| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734852|ref|YP_002115559.1| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263083|ref|ZP_03163157.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301037|ref|ZP_02663257.2| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198245669|ref|YP_002216562.1| permease PerM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929513|ref|ZP_03220587.1| permease PerM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357726|ref|ZP_02572897.2| permease PerM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358514|ref|ZP_02657100.2| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359481|ref|ZP_02829754.2| permease PerM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194458215|gb|EDX47054.1| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710354|gb|ACF89575.1| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197241338|gb|EDY23958.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288904|gb|EDY28277.1| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940185|gb|ACH77518.1| permease PerM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204321232|gb|EDZ06432.1| permease PerM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205329915|gb|EDZ16679.1| permease PerM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333537|gb|EDZ20301.1| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205344763|gb|EDZ31527.1| permease PerM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261247691|emb|CBG25518.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 362 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 17 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 75 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 76 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 135 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 136 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 186 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 187 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 245 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 246 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 306 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 352 >gi|329922576|ref|ZP_08278151.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328942120|gb|EGG38402.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 359 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 106/305 (34%), Gaps = 9/305 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI L F P++ + + P+ +K S ++++ L+ Sbjct: 26 LVDFIFRPVLSFFSIILVPLMLSGFFYYLLRPLVDLLEKRKLNRS--------LAILLLY 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +V L + + L ++V Q+ + L + + + + + Sbjct: 78 VVFAGILTGFILGVWPSLRDQIVALVQNAPALFAKLGEQLQELENNGFFQDIFPENANPL 137 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +L G F+ + ++ + + I L++ ++G + + S Sbjct: 138 TQLTDYL-NQGFTFLTNYIMNLFSFVSNFAIVLFTFPILLYYMLKEGGKFGKMVVSFLPD 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + + ++ +G ++ + G+++ + + G+P + L V+ I I Sbjct: 197 RFKGEGASVLDEINNALKGFIVGRVLVNLALGVLMYIGFLIIGLPYALLLTVVAVIANFI 256 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + I D + P++ G + + + Sbjct: 257 PFIGAILSSIPIVIIGFIQSPGTAIWSLVVILAAQQIQDNLIGPYIFGKQLAIHPITIII 316 Query: 315 GLVGG 319 ++ G Sbjct: 317 LVLVG 321 >gi|296332096|ref|ZP_06874560.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675509|ref|YP_003867181.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296150867|gb|EFG91752.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413753|gb|ADM38872.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] Length = 371 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 109/333 (32%), Gaps = 14/333 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-----------FLAVIATVS 69 + + Y+ P L ALI+ P+ T A Sbjct: 23 IAAAYYSFPLTYPFLIALILSSVIHPLVDYLDKVTGFPRTINVLGVLAFFLLAAFGVLTI 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + +L + +S I + + ++H Sbjct: 83 LVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELSLLFQELETNQQASIVTH 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q+L + + I RF + + +IF ++A FF +D + L Sbjct: 143 IQTLGDSAAKNAG-LLLSHILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAMLV 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ A K IS + K + ++ +++ L V + + Sbjct: 202 SILPGRVTANSKAISSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKVEHAATIAFLIG 261 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ ++P GA F +YL I G + A + + + + I + P ++ I + Sbjct: 262 LVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGVLY-LVVLIQRQLTEPKILSKSIGID 320 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T L G + G LGL GP ++ +I Sbjct: 321 PLATLIALFAGFKLFGFLGLIAGPAVLVIIQAF 353 >gi|254501255|ref|ZP_05113406.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222437326|gb|EEE44005.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 371 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 112/344 (32%), Gaps = 16/344 (4%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + I W+I +F LY G P ++ + + P+ A Sbjct: 1 MTLRRQIQFWLISLFAFCAFLYVFSGVLLPFVAGAAVAYLLDPVCDRLEKLGMGR--LWA 58 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + L + +L + L +++ + + R L + L Sbjct: 59 TFTILLAF------VFLLILFFILLLPVLGNQLASFLERFPELVRQLQGLVNDQMGQRLA 112 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 + L+ + G F+ + A G L + + F+ D Sbjct: 113 EAAGINLADLQASMAEMVG-QGAAFVGKLAQSVWSGGQALLSILSLFVITPVVAFYLLLD 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++D + ++R + + G + + G A +AG+ Sbjct: 172 WDHMIAKIDGWLPRDHLEEIRGLAREMDGAVAGFVRGQLSVCLLLGAFYAIALAVAGLNF 231 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLR 297 + +G+ +++ IP GA + F +++ L + + F+ L+ Sbjct: 232 GLLIGMGAGLVSFIPFVGAGLGFIVSMGVGVVQFWPEWPMILVIGAVFAVGQFLEGNILQ 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P LVG L + F L G +G+ I A+I V+ Sbjct: 292 PKLVGNSTGLHPVTLMFALFAFGYLFGFVGMLIAVPAAAMIGVL 335 >gi|256959836|ref|ZP_05564007.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256950332|gb|EEU66964.1| conserved hypothetical protein [Enterococcus faecalis Merz96] Length = 381 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 112/334 (33%), Gaps = 7/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + P+ + + K + + ++ + ++ ++ LL + Sbjct: 40 FFSTLFAPVLVAGFLYYLLNPVVN-LLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L S + + ++++P L+ +S + Sbjct: 99 ADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDISYANIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LF+ +DG + + + Sbjct: 153 LSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAVQRFLPEKRKDDIVDLLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I + G Y L GV GVI +IP P A Sbjct: 213 QLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I A L + + + P ++G +K+ L L+ GL Sbjct: 273 AVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILLVAGNLAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LG+F+G A+ I +K + + +N Sbjct: 333 LGIFLGVPFYAICRTTIYYVIDMVKAGRSEKVTN 366 >gi|325108129|ref|YP_004269197.1| hypothetical protein Plabr_1564 [Planctomyces brasiliensis DSM 5305] gi|324968397|gb|ADY59175.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 372 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 124/348 (35%), Gaps = 16/348 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++F L +L+ PVL + + P F + I V ++ + Sbjct: 26 FGLIFAFLWCCIYLRDVLLPVLVGFGLAYALDPALELFNRRWNVPRYVSLAILYVLIVLV 85 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + FL + E ++ K+ +Q ++S P G + SL Sbjct: 86 VVGVGFFLGPIFVEEAEQFAEKL--PDQIDQLKQTFVSSEPLGGTLQKAKESLEQSKGSL 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L +G ++ R G + ++ + I LF+F L S Sbjct: 144 ASSATQKLG-DGFGWLARVVGVTGYVLF----CLLTIPIFLFYFGWQFAETKDLLKSFIP 198 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + KV+ G I ++ + + + + L GVP + LG +T I+ Sbjct: 199 SRYRESTLDMLSKMDKVVGQYIRGRIICSLFQIVFYSAGWALVGVPYALVLGTVTGILGT 258 Query: 254 IPGGAPISFTAVSIYLLI---KGNIFNATCL--FLWGAIELFIV----DKTLRPFLVGGP 304 IP A + + + + +G + L F W ++ F V + L P++ Sbjct: 259 IPWAAGLGWPVAMLLAYLDIVQGGGGESVLLWAFFWPSVVYFTVQILENYVLEPWIQSSQ 318 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + ++ G G GL + + ++++E I EN Sbjct: 319 TSLGPITIIVAILIGGSVAGFFGLLLAVPIAGSGKILFQEVIFPRLEN 366 >gi|186474126|ref|YP_001861468.1| hypothetical protein Bphy_5344 [Burkholderia phymatum STM815] gi|184196458|gb|ACC74422.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 647 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 108/337 (32%), Gaps = 18/337 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------STFLA 63 G+ + +++ LYF + P+ A+++ F P+ + A Sbjct: 40 GLTSVITFVVVVCGLYFAREVLIPITLAVLLSFLLAPLVGLLRRLHFGQLPSIFVAVLTA 99 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGMWAS 120 V+A ++V L + L + KV + + L + A Sbjct: 100 VVALLAVSTLIGAQVAQLAGSLPQYQAAIERKVETVQEKTVGRADALLSRAATALARVAP 159 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFF 177 E +S K L + IP + A R + ++ +++ F Sbjct: 160 ERPAPAHEAGRSQKPTVAAPLPVEVHEPIPSPLQLAQRVFSPVVGPLETMFIVLVVTIFI 219 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + +L L + F+ + +G G + + G Sbjct: 220 LLQREDLRDRLIRLFGARDLHRTTTAINDAASRLSRYFVAQLGVNLGAGATIAIGLAIIG 279 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD---- 293 VP + GV+TA++ +P + A + +++ I + +W + +D Sbjct: 280 VPGALLFGVLTALLRFVPYIGT--WIAGLLAVILAAAIQPQWTMAVWTIVLFVSIDVVAG 337 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + P L G L L + G +GL + Sbjct: 338 QVVEPLLYGHSSGLSPLAVVVAAIFWSWLWGPIGLVL 374 >gi|14520804|ref|NP_126279.1| hypothetical protein PAB1962 [Pyrococcus abyssi GE5] gi|5458020|emb|CAB49510.1| Putative permease [Pyrococcus abyssi GE5] Length = 343 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 121/337 (35%), Gaps = 28/337 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 LK +P++ + + ++P + K + + L + A +++ + + + + Sbjct: 28 LKELISPIVFGIAATYIAYPFHIKLSRKLGKKLSVLLLSALLAIFTILF--FIGVTLWIT 85 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ L + + WL + + S ++ + T+ Sbjct: 86 DTLRNLYAYLNSFF-------SWLGSLNVPSFLSSIFDA---------------MATSFP 123 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + ++ + L +I + + + +++++ L +K+ Sbjct: 124 QKLRDILLQYTLSLPKLALQLIVFLAVFYATLSNSDFLAREIYELLPSSNRELGEKLIEK 183 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYW---LAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + + +I +G+ L ++ ++ V +A GV+ I+ ++P Sbjct: 184 VRDTVDAILKTWLFFSIIKGMFLTIGFYLFEISNVAGSIAAGVLCVILELLPVVGGWIMW 243 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +L K + A ++G + + + D TL+ G + + G+ GG+ Sbjct: 244 LAGAIILWKKSTLLALLFSIYGILTISPVPDYTLKSRFTKGRASVSSVVALVGIFGGLIA 303 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +G+ +GP+ + L+ + + K + Sbjct: 304 FGAVGIILGPIAIGLLLALIDAWKEIKLKQPSKARHS 340 >gi|291542731|emb|CBL15841.1| Predicted permease [Ruminococcus bromii L2-63] Length = 439 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 116/357 (32%), Gaps = 32/357 (8%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F L A I+ + YS + FLA F PL + Y Sbjct: 40 IITPFAIGFLFAYILNYPYKFFYSKVFGRMGRKRKFLAN---------FRKPLALIITYA 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIP------------GGMWASELWTKHLSHPQSL 133 ++ +V ++ Q + ++ +P W + ++ + + + Sbjct: 91 IVVAIFVVIISIVVPQIAASLFSLINSLPQYAGVLSDMTKTVVHWINHTFSMEIDASEVI 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLS-------IIFMIIALFFFYRDGFSISQ 186 + I F +S + I+ +F ++ + Sbjct: 151 NNFFKYITNLISAGNITSFLGNSTNAVFSAIMSTCNGVYNFLLGIVISVYFLAAKETLCR 210 Query: 187 QLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q+ L P + +I I +G I A G++ + +P Sbjct: 211 QIKKLAVAFIPIKYLPKIYEIVDITDTKCGRFLVGDIIDAAFLGVLTFITMSICQLPYAP 270 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + V+ + +IP P S ++L+ + + I + +P ++G Sbjct: 271 LIAVLIGVTNIIPFFGPFIGAIPSAFILLLIDPIYMIIFIIIIVIIQQLDGNLFKPKIIG 330 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L F ++ G G+LGL +G + A+I + + + ++K +I+ Sbjct: 331 SQVGLSSFWVLFSVIVGGGMFGVLGLILGTPIYAVIYALVGKRVKNKIDSKGRIAQE 387 >gi|302345184|ref|YP_003813537.1| hypothetical protein HMPREF0659_A5427 [Prevotella melaninogenica ATCC 25845] gi|302149106|gb|ADK95368.1| putative membrane protein [Prevotella melaninogenica ATCC 25845] Length = 374 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 122/361 (33%), Gaps = 16/361 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKE- 56 MR+T+ + I +I +L + L P A +I + +PI K Sbjct: 1 MRQTITFDKFIRWALIALAVLAVGFIINALSEVLLPFFIAWLIAYLLYPIVKFVQYKLHI 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I + V LF +F+ + ++ + ++ V + I Sbjct: 61 PGRALSIIITFILVAALFTAIFMFIVPPMINQVDKFMTIVNRYLHETTHTNDIATMIQKW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + + + I + S I ++ FF Sbjct: 121 IRENQTEIERFLKSSDFTNTIKTAMPK-----LFSVIGQTASILISIIASCITLLYT-FF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ + +W ++ + + + G ++++ G++ + + Sbjct: 175 ILLDYEVLTNNWIKIFPKNVRPFWAGLAEDAERELNNYIRGQGLVSLCMGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELF 290 P + +G++ I+ ++P + + L+ G F + A+ Sbjct: 235 DFPMAIGMGILIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFASALIVFAVVQL 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL I L LI W+ + Sbjct: 295 LMDMVITPKVMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEG 354 Query: 351 E 351 + Sbjct: 355 D 355 >gi|89096022|ref|ZP_01168915.1| hypothetical protein B14911_25035 [Bacillus sp. NRRL B-14911] gi|89088876|gb|EAR67984.1| hypothetical protein B14911_25035 [Bacillus sp. NRRL B-14911] Length = 369 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 117/317 (36%), Gaps = 7/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + F P L + +I + PI KK V++ + + + I L Y+ Sbjct: 36 FFETLFMPFLISGVIYYLLRPIVYFLNRKKVPK-----VVSILLIYLIVIGGTAALVYFV 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E++ ++ I R +D + W S + ++ K+N Sbjct: 91 GPELQRQFKDLMDNYPQYIEGLRNKADELQNSAWFSRFQENDYITFDYITEQMSSYFKSN 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 D R F I I+ + +F+ +D S+ + + A +KI Sbjct: 151 FSDLSSRLTGVF-SIVTSVVTVIVTVPFIVFYLLKDSEGASKGMVRYLPYFQAAETRKIL 209 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + + + S G I++ G+++ Y + G+ + L ++ + +IP P Sbjct: 210 KDMDEALSSYIQGQAIVSFIVGVMMYIGYLIIGINYSLILAIVAMLTNVIPFLGPFLALV 269 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ + + F A + L + I P ++G + + L L+ G Sbjct: 270 PAVIVGFTMSPFMALKVILVVIVVQQIDGNVSSPLIMGRKLDVHPLTIILILLVAGNLAG 329 Query: 325 LLGLFIGPVLMALIAVI 341 L+G+ + A+I VI Sbjct: 330 LIGMIVAVPAYAIIKVI 346 >gi|157964778|ref|YP_001499602.1| permease PerM-like protein [Rickettsia massiliae MTU5] gi|157844554|gb|ABV85055.1| Permease PerM-like protein [Rickettsia massiliae MTU5] Length = 392 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 118/350 (33%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + P A I+ + P SK + S+ F + I Sbjct: 42 MNRTVIFWLVFLGFFISGFMLMSDAVKPFFIAFILSYLLQPAIGFIASKFKISNKFASSI 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 102 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMAKIYSIEP 156 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 157 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 216 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL KI + ++ + G I + A+ + G+ + LG Sbjct: 217 ANMQSLLPIKTRPKILKILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 276 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + P ++G Sbjct: 277 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 336 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 337 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 386 >gi|288556236|ref|YP_003428171.1| sporulation integral membrane protein YtvI [Bacillus pseudofirmus OF4] gi|288547396|gb|ADC51279.1| sporulation integral membrane protein YtvI [Bacillus pseudofirmus OF4] Length = 374 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 15/342 (4%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I ++V + L FF+ P A I + P K + SS F + + Sbjct: 13 VIIAIALIVFGWLLINFFSLTYPFWIAAAIAWFLQPWVRFMREKLKFSSGFASFFGLLGS 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----------HGIPVPRWLSDIPGGMWAS 120 + L + + ++ ++ + + + P W + S Sbjct: 73 IILVSSVITGAIFLIGYSLRNFFQQIPGWIETSSISLQQFFNQVIFPFWQQILGIFDTFS 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L L + + M + ++ +F+I++++F + Sbjct: 133 YEEQEALRQSIVQLGSQVGSLLGQAGQTLVDRITHILMGVPTFLVAFVFIILSIYFMGKQ 192 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ F + V + I+ + GL++ + V Sbjct: 193 WTFYREKTREALAPSFLLLIRDFGAAVRTRLFGFLKAQFILMMITGLIVLVGLSILRVEH 252 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ I ++P G +YL I G+ A L + I + IV + + P Sbjct: 253 VVTLAVVIGIAELLPYLGTGTILIPWFVYLFIVGDFSLAIGLTILYGIIV-IVRQLIEPK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + L + L G++ G LGL GPVL+ + ++ Sbjct: 312 ILSSNLDLNPVAVLISLFVGLQLFGALGLLFGPVLLVFLMIL 353 >gi|149181142|ref|ZP_01859642.1| hypothetical protein BSG1_10423 [Bacillus sp. SG-1] gi|148851229|gb|EDL65379.1| hypothetical protein BSG1_10423 [Bacillus sp. SG-1] Length = 343 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 120/324 (37%), Gaps = 20/324 (6%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + AL+I PI + K + ++ ++ +FI + L + L Sbjct: 4 PFIIALVIALLINPIVNFLERKSKMPRGLAVALSLFLIIGVFIGLITLLITEIVSGANYL 63 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + QH + + + + + + ++L+ + + N + Sbjct: 64 ANVLP---QHVTTLVEYFENF-IAAQVIPFYHQIIGLFKNLEAGQQGAIMENIQAAGEKI 119 Query: 153 ASRFGMIFLDY--------------CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 AS G ++ +IF +A FF +D + +S++ Sbjct: 120 ASSAGDFLQNFFQRLPNLVSWIPNAATVLIFSALATFFISKDWYHLSEKFSKYVPVKAAT 179 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 +++ + K + + +++ + V + + ++T ++ ++P G Sbjct: 180 SGRRVFHDLKKALFGFIRAQFTLISITAVIVLIGLLILRVDYAITIALVTGLVDILPYLG 239 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 F IY LI GNI L + + + + + P ++ I L L T L Sbjct: 240 TGAVFVPWIIYELITGNIGLGVGLGVLYLVVVVQ-RQIMEPKVLSSSIGLDPLATLIALF 298 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G + +G LGL +GPV + +++ + Sbjct: 299 VGFKLVGFLGLILGPVTLVILSTL 322 >gi|55376336|ref|YP_134189.1| HTR-like protein [Haloarcula marismortui ATCC 43049] gi|55229061|gb|AAV44483.1| HTR-like protein [Haloarcula marismortui ATCC 43049] Length = 388 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 69/396 (17%), Positives = 134/396 (33%), Gaps = 50/396 (12%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------- 53 R T + + + +++ + L F A ++ + + + S PIY S Sbjct: 3 RSTRFQQRSLFAIGGLGLLIGVAFVLVQFRATLIFTVFLYYASRPIYRKLESVSTPSYFS 62 Query: 54 --KKEESSTFLAVIATVSV----------MCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 LAV +VP + F +S + A+ Sbjct: 63 EYSLPYRRQILAVTTISVFLLPFLLLFTYTLALVVPAVQQFIGQNDLASGYLSAIQSADS 122 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 G+P P G+ S+L +S + + IL+ ++T + S G +F Sbjct: 123 GGLPEP------IAGLQISDLLD--MSPEEIVTILNAPSVRTWIEQTLGTLISSIG-VFA 173 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 D + ++ ++ DG +S+ L + + + V + S G + Sbjct: 174 DVGIQAFLLLSGTYYLLTDGPRLSRWLFDHFDE--SGVVESYAIAVDDELSSILFGNILN 231 Query: 222 AIGEGLVLGSAY--------WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL--- 269 A+ G++ + VP +G +T ++IP G I + V L Sbjct: 232 ALVTGIIGIVVFSAYNSISPAAVQVPFAPLVGALTGAGSLIPVVGMKIVYFPVGAILTVG 291 Query: 270 -LIKGNIFNA----TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + G L L + I D +RP++ + F + G G Sbjct: 292 AVASGQATAIGYVLLFLILAFVVVDTIPDFLIRPYV--SGNRTHVGLLMFAYILGPIVFG 349 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+F+GP+L+ L+A ++ + + S Sbjct: 350 AYGIFLGPILLVLVAQFFRTVAPYVATGEPPDQSKL 385 >gi|46447158|ref|YP_008523.1| hypothetical protein pc1524 [Candidatus Protochlamydia amoebophila UWE25] gi|46400799|emb|CAF24248.1| hypothetical protein pc1524 [Candidatus Protochlamydia amoebophila UWE25] Length = 381 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 101/316 (31%), Gaps = 11/316 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ + + + P+ F + S F ++ V + + ++ +L Sbjct: 55 FVSSLFIPIVFSFLFYYLLRPLVCFFE-HLKMSRFFSILLTYVLIGIVLVIFFAYLLPIL 113 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ + V L + L T + L Sbjct: 114 ATQIVAFANTSV----------ETLEKVKNSSQTFVLPTGFKLDLEGEIERRLLNLIQYA 163 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + + +F+ +D + F + I + Sbjct: 164 TAILSQNLLDIVGYLTRLATILAVIPFIVFYLLKDDHDFASGFLQHLPQDFGQNVRNILK 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + + G+ +I+ G +L Y + G+ + L ++ ++ IP P Sbjct: 224 NIDETLSNYINGLVLISFSVGSMLFIGYLIIGLKYALILSIMALVLTTIPYLGPFLAITP 283 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + AI + P ++G + + L L+ GL Sbjct: 284 AVLTGLSHSPTMTLKVIAVFAIVQQTESNIVSPQIMGQRLNIHPLTLILLLLAAGSLYGL 343 Query: 326 LGLFIGPVLMALIAVI 341 +GL + A++ V+ Sbjct: 344 IGLLLATPFYAILKVL 359 >gi|291549176|emb|CBL25438.1| Predicted permease [Ruminococcus torques L2-14] Length = 407 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 118/333 (35%), Gaps = 13/333 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPL 78 + G P + I F S K I+ + + L + + Sbjct: 38 IWGILFPFVFGGAIAFVINVPMSFLEKKIFGKTKDGNKVGKKLARPISLLLTIILAVGVI 97 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMW-ASELWTKHLSHPQSLKIL 136 + + + ++ + ++++ + +P + W+ + +L + + Sbjct: 98 ALVMFGVIPQLTRTMGSLMISIANFVPQMQNWIREFSHNNQDIMKLVNQVQFNQDQAIKW 157 Query: 137 SETFLKTNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + + + S G I F + ++ F LF + I + + Sbjct: 158 GISILGSGAGNMMNTTMSAVGSIVSGFATFFIAFSFACYILFQKEKLHVQIRKVFFAFIS 217 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + KI + + + G + A+ G + + +P + +G + A A+ Sbjct: 218 KQKAEAFLKICSLTYQTFANFLTGQCVEAVILGSMFVVTLSILKMPYALLIGTLIAFTAL 277 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP AV +L+ N A + I I + P +VGG + LP + Sbjct: 278 IPIFGAFIGCAVGCFLIFMVNPKQAILFIIVFLILQQIEGNLIYPHVVGGSVGLPSIWVL 337 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G MG++G+ I L++++ I++E + Sbjct: 338 AAVTIGGNLMGIVGMLIFIPLVSVLYTIFREFV 370 >gi|158522017|ref|YP_001529887.1| hypothetical protein Dole_2006 [Desulfococcus oleovorans Hxd3] gi|158510843|gb|ABW67810.1| protein of unknown function UPF0118 [Desulfococcus oleovorans Hxd3] Length = 363 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 129/360 (35%), Gaps = 12/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I+ + I+ + V + + APV++A++I + + + K Sbjct: 10 RRYANDPQIIILFAILVVGFVLVLTMGDMLAPVIAAIVIAYLLEGLINVLERLKVSRMIA 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 L + T+ + + V ++F ++ E+ ++ +G L + + A E Sbjct: 70 LVTVFTLFLAGMVAV-IVFFLPLLSRQIAEMFQELPALMANGQKQLMRLPERYPELIAQE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ +S + F T + + + + +I + + +FFF +D Sbjct: 129 QISQFISFLK--------FEITQWGQHLVSISIASVRGLITVVVYLILVPLLIFFFLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L ++ V + I + G + + + G+ Sbjct: 181 TKILGWLKLFLPKNTRL-AAEVWHEVNQQIANYVRGKIWEILIVWTAAYALFAALGLKFA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPF 299 V + + + + P GA + F V++ + + + + G + L +D L P Sbjct: 240 VLISLAVGLSVLAPYIGATLMFFPVALVAFFQWGLSPSFTWIVVGYLILQALDGNLLAPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ + L + L+ G+ GLF L L+ + K +KE + Sbjct: 300 LLSEVVDLHPVAIIVALLVFGGIWGMWGLFFAIPLATLVHAVLKTWFRYMKEKNPPATEE 359 >gi|313889430|ref|ZP_07823078.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] gi|313122262|gb|EFR45353.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] Length = 374 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 116/334 (34%), Gaps = 18/334 (5%) Query: 28 KGFFAPVLSALIIGFTSW---PIYSSFI---SKKEESSTFLAVIATVSVMCLFIVPLLFL 81 F A II + + + ++A + + LF + + Sbjct: 40 LPFLYGAALAYIINIVMTAYENLLNRLVKTNRFFHLRRGIAMILAYATFIALFFWIVSIV 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + ++S V +++ D+ +++ + + + Sbjct: 100 IPDLIASINMMLSF------DTGSVKQYIHDLSHNKIIAKV-IHYFGGDAKITQTVSNYS 152 Query: 142 KTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + F+ S + + +++ + F+ + + +Q + L + Y Sbjct: 153 QQLLKQFLSFLTSILTSMTVIASAIINVFVAFVFSFYVLGNKEQLCRQGNILVDTYTGIY 212 Query: 200 WKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++I ++ F+G TI A+ G + +L +P +GV+ A A+IP Sbjct: 213 AQRIHYIVGLLHNRFHGFFVGQTIEAVILGSLTALGMFLFKLPFAATIGVLVAFTALIPV 272 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L++ ++ A ++ I + P +VG IKLP + + Sbjct: 273 VGAYIGVTIGFILIMTQSLSQAIFFVIFIVILQQFEGNLIYPRVVGSSIKLPGMWVLMAI 332 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G++G+ I L A + K++I + Sbjct: 333 TIGASLKGIVGMIIAVPLAATFYQMIKDNIDKKQ 366 >gi|302553800|ref|ZP_07306142.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302471418|gb|EFL34511.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 368 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 110/326 (33%), Gaps = 14/326 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ L++ +WP+ + F+ ++ A + TV + + + + + EL Sbjct: 43 PLVVGLLLTTLTWPV-ARFLRRRGWPPALAASVVTVLFLLVAAGVVALIAVPVASQSGEL 101 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 VV Q WA+ + S G+ + Sbjct: 102 TDGVVEGIQRL------------REWAAGPPLNIGDAQINKAFDSAVARAQQGVGSMVGT 149 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + ++ + + +FFF +DG L + + Sbjct: 150 VVTGVSTVVGGVVTAVLALFLMFFFLKDGPKFLPWLSRQLPGRLADDVPIVFARGWATLG 209 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + + + + +++G W+ G+P + L V+T + A +P GA + + L+ Sbjct: 210 AFVRSQAAVGLLDAVLIGLGLWILGIPLVLPLAVLTFVSAFVPIIGALFAGFVAVLIALV 269 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + +A + + + +P + + L + G G++G + Sbjct: 270 SNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHAAVVLLAVTLGGSLAGIVGSLLA 329 Query: 332 PVLMALIAVIWKESIMAIKENKEKIS 357 L ALIAV+W + E E+ Sbjct: 330 VPLAALIAVVWNYVREQLGEPPEEPD 355 >gi|218439972|ref|YP_002378301.1| hypothetical protein PCC7424_3031 [Cyanothece sp. PCC 7424] gi|218172700|gb|ACK71433.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 377 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 112/311 (36%), Gaps = 13/311 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + +L+A +I F Y+ K A+ ++ +F + + L + + + Sbjct: 37 ISILLTAALIAFLLN--YAVMALKPVLPRPIAAIFVYLAAGLIFGIIGVTLLPPVVNQGR 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L+ ++ G S + + + G+ + Sbjct: 95 QLIIRLPELVTQGQEQLNTFQAWSVEHNLPFNLQLITSDFFTRIQDQIRLIASTGLGLVL 154 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ L +I +++ F+ DG + + L S + P +++ + K Sbjct: 155 --------GTFNWFLDLILILVISFYMLIDGERLWESLTSF---VSPQIQDQLTITLEKN 203 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +R G I+ + + L A+ L P + V +M ++P + + +L Sbjct: 204 LRRFLTGQLILGLFMAICLTIAFLLLQTPFFLLFAVFIGLMELLPFIGATLGIGIVVIIL 263 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 N + A + + + I D + P ++G LP + F L+ G + G LG+ I Sbjct: 264 TFINWWLALQVLIVSVVIQQIKDNIVSPRIMGNLTGLPPVIIFIALLLGAKIGGFLGVII 323 Query: 331 GPVLMALIAVI 341 + ++ + Sbjct: 324 AIPITGVVKGL 334 >gi|206976093|ref|ZP_03237003.1| putative membrane protein [Bacillus cereus H3081.97] gi|217961880|ref|YP_002340450.1| hypothetical protein BCAH187_A4523 [Bacillus cereus AH187] gi|222097833|ref|YP_002531890.1| membrane protein [Bacillus cereus Q1] gi|206745845|gb|EDZ57242.1| putative membrane protein [Bacillus cereus H3081.97] gi|217065152|gb|ACJ79402.1| putative membrane protein [Bacillus cereus AH187] gi|221241891|gb|ACM14601.1| probable membrane protein [Bacillus cereus Q1] Length = 355 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 43 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 95 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFIGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPVLAVIRTV 342 >gi|239918422|ref|YP_002957980.1| predicted permease [Micrococcus luteus NCTC 2665] gi|239839629|gb|ACS31426.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 438 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 116/326 (35%), Gaps = 24/326 (7%) Query: 13 RWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 R +++ + L L + FF APV L + ++P+ + I + A Sbjct: 33 RMLVIVLTLAGLVLVVQFFQGIASIAAPVFLGLNLVIVAYPLQAWLIRR-GLHPVLGATT 91 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ + V + + G+ + EL Q + V WLS+ Sbjct: 92 TVLLIVAVMGVFGGMMVWSGLELVAELPKYTDRFQQIVLDVSHWLSE------------- 138 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P + + + ++ ++ +I+ +FF D + Sbjct: 139 RGVTPDMVSQQLASIDMSAVTGTAVSAVTKIATNVYAVFGLLVTVIMGMFFLAMDSMDVE 198 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + +R ++ T+ + ++ A L GVP + G Sbjct: 199 RRVRLLST--ARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLDVIALMLIGVPLALVWG 256 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V++ + +P G I ++ L G + + + ++ F++ ++P + G Sbjct: 257 VLSFLTNYVPNVGFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVLNFVLQSVIQPKVAGDA 316 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + +F L+ +G LG + Sbjct: 317 IGVIPTVSFLSLLFWAWVLGPLGAIL 342 >gi|147676778|ref|YP_001210993.1| permease [Pelotomaculum thermopropionicum SI] gi|146272875|dbj|BAF58624.1| predicted permease [Pelotomaculum thermopropionicum SI] Length = 364 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 117/327 (35%), Gaps = 7/327 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I ++ + +F P L LI+ P+ F K + A + V + Sbjct: 22 LVIAAIAFKLVIPYFLPFLLGLILAVAIEPVVGLFQKLKMPRA--AATGMAMLVTVGSLA 79 Query: 77 PLLFLFYY-GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +L ++E+ ++ L +E + +H + Sbjct: 80 AVAWLTVSKLIVELARFLANAPSHTSIMKDQSSLLMQ--RLQSYAEGFPPEFTHHLNKNA 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + + + R + L ++ +IA FFF +D + +++ S Sbjct: 138 EMLTEMFSEKLSLLAREILGVITGLPNQLLLVVIALIAAFFFSKDLPILKKKMLSAIPRE 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ ++ + I++ LV+ + + VA+ ++ +++ IP Sbjct: 198 YHHKFEIMAGEIYHSSIGFIKAQAILSAITSLVILAGLIILKTEYVVAISLLGGLVSPIP 257 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G F I L++G F A L + + ++ ++ P ++G + + L Sbjct: 258 VLGVGTIFIPWIIISLLEGKTFMAAGLIILFFAVV-VIKHSIEPKVLGENMGIAPLSVLI 316 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G G G +GP ++ + Sbjct: 317 SLYVGYELFGAYGFILGPFVLITYNAL 343 >gi|327438419|dbj|BAK14784.1| predicted permease [Solibacillus silvestris StLB046] Length = 362 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 7/311 (2%) Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + K+ + + + LF L+ + ++ LV + Sbjct: 57 LQRILEKRGMPRWGSLITIVLIIAGLFASFLILVGTPIANQVNRLVENAPTIAKDIEEAA 116 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 ++ D + + + I + ++ F + L++ Sbjct: 117 DFILDNKENIPMLPPQVEEFIASVTNSIQDIAVASS-------KYLVSFLSGAVTVTLTL 169 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + F +D + Q+ + + KK + V+RS G +++ + Sbjct: 170 VLAPFFFIFMLKDHEKFAPQIYGIFSGERRTWVKKTLEEIDNVLRSYVQGQVLVSFLLAI 229 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 ++ Y + G+ + L + M MIP P ++ + + N F+ + + + Sbjct: 230 MMYIGYLIIGLEYSLLLALFAFFMNMIPFIGPWLSLVPAVIVALLNNPFDVIWVGVVTLV 289 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P ++G + + L ++ G +G+ I +I VI + Sbjct: 290 AQQVESNLITPNVMGRSLDIHPLTVISIVLAAGNIAGFIGILIAIPTYCVIKVIVQNIYE 349 Query: 348 AIKENKEKISS 358 K+ KE + Sbjct: 350 ERKQIKETANK 360 >gi|291451527|ref|ZP_06590917.1| integral membrane protein [Streptomyces albus J1074] gi|291354476|gb|EFE81378.1| integral membrane protein [Streptomyces albus J1074] Length = 467 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 103/307 (33%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYS---SFISKKEESSTFLAVIATVSV 70 + ++ +L+ L V + A I + + + + + V Sbjct: 98 LLVLAGTLWVLMKVIVSVQLVVFAFIAALLVTALLQPTVTALRRMGMPRGAATAVTAVLG 157 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + L S+V + WL + P + ++ + Sbjct: 158 FVIMGLVGWFVVWQVMENIDTLASQVQDGIDE---LRGWLLNSPFHVTEDQINDIAKTLR 214 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ +E + ++ ++ + + F DG I + + Sbjct: 215 DAVGTNTEELTSAGLEGV---------TVLVEVLTGMVLAMFSTLFLLYDGKRIWRWTLN 265 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + G ++A+ + + +G W VP V L V + Sbjct: 266 LVPAQARPGIAGAGPRAWRTLTAYVRGTVMVALIDAIFIGLGLWFLDVPMAVPLAVFIFL 325 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 326 FAFIPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRVHP 385 Query: 310 LPTFFGL 316 L + Sbjct: 386 LAVVLSV 392 >gi|152976804|ref|YP_001376321.1| hypothetical protein Bcer98_3102 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025556|gb|ABS23326.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 352 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 112/311 (36%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A I + P+ + T++++ ++I+ L Y Sbjct: 43 ITPFFIACFIAYLLHPLIEKLHKQGMPR--------TLAILLIYILFFGGLGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++S++ N+ P ++ M T + K+ I + Sbjct: 95 VVISQLQEMNK---QFPEFMKMYDSWMDGVTEQTDNFPSFIHDKVKQIFVGIEMKIQSLL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D + L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGAFYHVFWKLTPYKWRDTGQILAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V A+W G+ + LG++ + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSALAFWFIGMKYPLLLGIVVGVTDIIPYFGPILGAIPTLMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVGGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPILAVIRTV 342 >gi|291550779|emb|CBL27041.1| sporulation integral membrane protein YtvI [Ruminococcus torques L2-14] Length = 374 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 109/315 (34%), Gaps = 16/315 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L GF P + II + P+ + + + + + + V+ L F + Sbjct: 29 WKLLGFLMPFVVGWIIASIATPVVNWLEKRLKIRKKLGSALIIIGVLALMGTLGYFAVSW 88 Query: 85 GMLEMKELV--------SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + E+ L+ +Q GI + S +P G+ WT +++ Sbjct: 89 LVSEVSSLIKDFPEMYVQLEKGLHQIGISMSGIFSKLPDGIQNG--WTTTVANLDDTMGS 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + + A Y +S I +++ +FF + + + + Sbjct: 147 ----LMSKISEPTVSAAGNIAKRVPSYLVSTIVAVMSSYFFISEREEVVTWVKQIAPKSV 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + + F I L+L V V + A + +P Sbjct: 203 TERMIMVIDNLKYAVGGYFKAQFKIMGIVFLILAVGLGFLRVHYFVLSAFLIAFLDFLPF 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + +IY + G+ A L + AI IV + ++P LVG + L L T Sbjct: 263 FGTGTAMIPWAIYAVFMGDYKRAIMLVVIYAITQ-IVRQLIQPKLVGDSVGLNPLVTLLL 321 Query: 316 LVGGVRTMGLLGLFI 330 + G R G++ + + Sbjct: 322 IYIGYRIGGVIWMIL 336 >gi|225390466|ref|ZP_03760190.1| hypothetical protein CLOSTASPAR_04220 [Clostridium asparagiforme DSM 15981] gi|225043477|gb|EEG53723.1| hypothetical protein CLOSTASPAR_04220 [Clostridium asparagiforme DSM 15981] Length = 372 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 113/342 (33%), Gaps = 5/342 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I V L + P ++A +I + ++ +A++A + C Sbjct: 30 LAIAFVILRYGLPMLTPFVAAFVIAYLLNTPICFAANRLRLPRKAMAILAVLLFYCTVGS 89 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPV--PRWLSDI-PGGMWASELWTKHLSHPQSL 133 + LF + L S + H I S I + + + Sbjct: 90 LIALLFIKLFSSGRVLFSNLPAIYSHYIEPVFAAVFSSIEQTVLRMDPSLIGTMEELEGH 149 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S + ++ + S + ++ MII FF D ++ Sbjct: 150 FAQSAGQMVSSLSMDAVGWISGIASSLPGLFIELLLMIITTFFIAADYDKLTGFCLRQMG 209 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I V + +I + L L GV + V + + A+ + Sbjct: 210 EKPKGIFLNIQSYVVGTLFVCIRSYALIMSITFVELAVGLTLIGVKNSVLIAFVIAVFDI 269 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + GN A L + + + ++ + P +VG I L + T Sbjct: 270 LPVLGTGGIMIPWMVITAVMGNPRLAIGLLVVY-LVITVIRNIIEPKIVGSQIGLHPVVT 328 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G + G+LGLF P+ ++L+ + + I + E Sbjct: 329 LVSMFAGAQLFGVLGLFGFPIGLSLLGYLNDTDTIRIFKKSE 370 >gi|326331167|ref|ZP_08197463.1| putative permease [Nocardioidaceae bacterium Broad-1] gi|325951062|gb|EGD43106.1| putative permease [Nocardioidaceae bacterium Broad-1] Length = 473 Score = 83.0 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 120/335 (35%), Gaps = 16/335 (4%) Query: 14 WMIMFIILVSLYFLK--GFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 W + I+ ++ GF PV+ AL+I P+ ++ + A+ Sbjct: 97 WRFLVIVAAGYLIVRALGFLSIVVVPVVIALLIAALVSPVVDGL-ARVGLKRSISALFVV 155 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ I L F +L + V A + D T+ Sbjct: 156 IGVLAAVIAMLSFAGTQVANGFTDLAGQTVKA-------LDEIRDWLINGPFHASETQID 208 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +++ E + + R S G + LD + ++ + +FF +G I Sbjct: 209 TWLNTVQTTVEDWAAAYASNPFSRV-SEVGGVALDVFAGLFIVLFSTYFFCAEGERIWGW 267 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + R+ + I+A + + + +P VA+GV+ Sbjct: 268 LVRLAPRAARSRMDSSGRVAWVSLTQFTRATVIVAAVDAVGIMIIAAALQIPFVVAIGVL 327 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIK 306 + + +P AV++ + + L L G I + ++ L+PFL+G ++ Sbjct: 328 VFLSSFVPLIGATVAGAVAVLVALVSQGPVTALLMLGGVILVQQLEAHGLQPFLLGRWVR 387 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L + G+ G+ G + L+A + + Sbjct: 388 VHPLGVILAVATGIVLGGVAGALVAVPLVAALNAV 422 >gi|295097974|emb|CBK87064.1| Predicted permease [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 354 Score = 83.0 bits (204), Expect = 8e-14, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWP-TARLEHIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 ATSIVLVLFVGILLLMSFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRARIMTMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + + G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWQEMNQQITNYIRGKVLEMIVVGVATWIGFVIFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQGLDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|196039150|ref|ZP_03106456.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196029777|gb|EDX68378.1| putative membrane protein [Bacillus cereus NVH0597-99] Length = 355 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 43 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 95 IVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPVLAVIRTV 342 >gi|121535600|ref|ZP_01667407.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] gi|121305840|gb|EAX46775.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] Length = 344 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 125/338 (36%), Gaps = 9/338 (2%) Query: 12 MRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 RW+ +++ LY L + P++ A I+ F P+ + S Sbjct: 4 ARWVKFGVLVAGLYLLSKATAIYLPIILATILAFVLNPVVNWLCSLSLGPKKQA----CS 59 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L ++ L+ +++ +P L I E Sbjct: 60 RPVAILLGFFLAALLLSLMATYILLPFAQESDKLADSLPALLIKIRTLTSTIEYRANMAE 119 Query: 129 HPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P ++++L + L + + A + F + +I + + ++F +D + + Sbjct: 120 VPDNVRVLIDEGLARAAAFSVELAQRAINAFIGFASQVVELIVVPVLTYYFLKDWRDLKR 179 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + V+ G +++I G ++ S +L G+ + LG+ Sbjct: 180 MAVDLFPAGMRGKATVVIEEMGTVVSKYVRGQVLLSIIMGFIVFSGMYLLGLDYPLVLGL 239 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP PI ++ L A + ++ + + + + P ++G I Sbjct: 240 LAGLTEFIPIIGPIIGAIPAVLLAYATEPALALKVIIFYFLAQQLENHIILPKIMGHTID 299 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + L+ G + G++G+ + + A++ V+ K Sbjct: 300 LHPVFVMVSLLIGGQLYGIMGMMLAVPVAAILRVLLKH 337 >gi|294497247|ref|YP_003560947.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] gi|295702619|ref|YP_003595694.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] gi|294347184|gb|ADE67513.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] gi|294800278|gb|ADF37344.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] Length = 343 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W+I I++V L + P++ AL+ I + + ++ + + Sbjct: 7 WVIASIVIVCLLI--PYSLPIVFALLTALALEGIVQKLHQSFKMKRVYAVLMTFILYVVS 64 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+ F+ + ++ L + + + I +++ L T+ +S + Sbjct: 65 LILIGFFIVRTIVTQVVALSKIAPSFVKEIYETAIYPTIIKWKYYSNALPTEVISSIERT 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + + F + L + ++AL F + +I ++ S Sbjct: 125 LEKTVNSLDSLLKSTV-EIIISFAATVPGFLLEFLIYLVALVFISLELPAIKNKIKSFLT 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + I+++ ++ WL VP L ++ I+ + Sbjct: 184 EETKYKLQVVITQLIQAGVGFIKAQIILSVMTFVMAYVGLWLLDVPYTALLSLLIVIVDI 243 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G I+ L +G+ A LF+ + +V + + P + + + L Sbjct: 244 LPILGTGSVLVPWGIFALTQGHDSLAIGLFILFG-VITVVRRVVEPKVFSTNMGISPLAA 302 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L G + +G +GLF+GP L+ L + K I+ I Sbjct: 303 LVSLYIGFKLLGFVGLFLGPALVILYDALRKVGIIQI 339 >gi|29347686|ref|NP_811189.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] gi|29339587|gb|AAO77383.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 377 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 121/334 (36%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ L V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCSLFLITLVGVSLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ +ILSE + Sbjct: 87 --VPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRILSEENILAAIK 144 Query: 147 DFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D I++ L + + + + Sbjct: 145 DTVPRVWALLAESLNILFSILASFIILLYVIFILL-DYEVIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTVLLAILKAADTGENFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ + Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKER 357 >gi|296104116|ref|YP_003614262.1| hypothetical protein ECL_03779 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058575|gb|ADF63313.1| hypothetical protein ECL_03779 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 354 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 116/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWP-TARLENIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 ATSIVLVLFVGILLLMAFVVMPVAWQQGINLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRARIMTMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + I G+ + + G+ Sbjct: 180 KDQMLNAVRRILPRNRGLAG-QVWEEMNQQITNYIRGKVLEMIVVGVATWIGFLIFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ + +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGLSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|284032875|ref|YP_003382806.1| hypothetical protein Kfla_4991 [Kribbella flavida DSM 17836] gi|283812168|gb|ADB34007.1| protein of unknown function UPF0118 [Kribbella flavida DSM 17836] Length = 525 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 90/285 (31%), Gaps = 16/285 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ +L I P+ F+ + + + + ++ + ++ Sbjct: 217 LILLVVSLFIAVGLNPLVEWFMRR-GLNRGLSVGVVFLLMILAVAGVGFAIVPVVTDQIN 275 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ P WL + +EL ++ ++ + + L I Sbjct: 276 GLIRNA----------PEWLDLLTKSRTLNELNERYQFIQKAQDYVQDPALAQRAFGGIL 325 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G + + S ++I +F S+ + SL + V Sbjct: 326 G----VGKVVANALFSGFTILILTLYFLASLPSVKRAAYSLVPASRRTRVSILGDEVLGR 381 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + G ++A+ G+V+ + G+ VAL ++ A IP + + + Sbjct: 382 VGGYVSGQFLVALCAGVVMFVFLQIVGLRDYAVALAIVVMFTAFIPMVGGLIGVVLVAAI 441 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 ++ +G I + + + P ++ + +P T Sbjct: 442 GFTDGLWVGIACLAYGVIYQQVENYVVAPRIMRRAVDIPGAVTVI 486 >gi|119962935|ref|YP_946407.1| permease [Arthrobacter aurescens TC1] gi|119949794|gb|ABM08705.1| putative permease [Arthrobacter aurescens TC1] Length = 378 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 110/302 (36%), Gaps = 15/302 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + ++ +A + ++ + + + + EL+S+ + +L Sbjct: 75 MLRRRGWRGGLATGVAFLGLLIVLGGVITVIVMSVRSQWDELISQAAAGLDE---LESFL 131 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + + L E ++ + A + ++ + Sbjct: 132 LTGPFPI-----------DREQLNQAREAVVEFAQSSQVRSGAVTGLSVVTEFLAGASLV 180 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ LFFF +DG I + + A +++ + +V+ G I+A+ + + +G Sbjct: 181 VVILFFFLKDGAKIWEFFLRPFKGRREAKLRRVGKRTMEVLGGYVRGTAIVALVDTVAIG 240 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 +A + VP + L +I I A IP GA ++ ++ L+ A + + Sbjct: 241 AALLIMQVPLAIPLAIIVFIGAFIPLVGATVAGILAALVALVANGPIVALIVIIVVIAVN 300 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+P ++G ++L L L G G++G + + A+ I + Sbjct: 301 QLEGDLLQPVVMGKSLELHALVILMALTAGTILAGIIGAVLAVPIAAVTWAIIQVWTAED 360 Query: 350 KE 351 + Sbjct: 361 PD 362 >gi|256832710|ref|YP_003161437.1| hypothetical protein Jden_1485 [Jonesia denitrificans DSM 20603] gi|256686241|gb|ACV09134.1| protein of unknown function UPF0118 [Jonesia denitrificans DSM 20603] Length = 455 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 110/347 (31%), Gaps = 24/347 (6%) Query: 12 MRWMIMFIILVSLYF------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 W+ + ++ ++++ L G F ++ AL + P+ + + Sbjct: 79 ALWLTVLVVFLAIFLWRAMGSLTGLFINLVIALFLSLALEPMIVWLVRH-GWRRGGATAV 137 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + I + + + +LV + + + W+ + Sbjct: 138 TLFGSLIAVIGLVSVFGRMFIEQATQLVRTLPDMYES---IAAWIEK------------R 182 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + G A G + + ++ +++ ++ G Sbjct: 183 TQYDVPEMSQLQRQLIDQIGSAEAANQALAIGAGLVSFLFNLSVVLLVAYYLSAAGPRFR 242 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ I + I ++A + GVP + L Sbjct: 243 ASICAWLSPAHQTEVLRLWDITQRKIADYINSRVLLAAICSFFTAIFLQIIGVPYALPLA 302 Query: 246 VITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V T +++ +P G I ++ L G++ +A + ++ + + + L P + Sbjct: 303 VFTGVVSQFVPTIGTYIGGALPIVFALTTGDLTDAVAILIFIVVYQQVENLWLSPKISAR 362 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++L ++G G LG F+ + A I I + + Sbjct: 363 ALELNPAVALIVVLGFGAVFGALGAFLALPVAATITAIASTYLRRHE 409 >gi|45934803|gb|AAS79467.1| putative permease [Streptomyces bikiniensis] Length = 382 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 105/318 (33%), Gaps = 17/318 (5%) Query: 14 WMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ ++ L ++ P++ L+I +WP ++ + + A + TV Sbjct: 25 LLVLLGTAAVIWLLGRMWSIVWPLVIGLLITTLTWP-FARLLRRLGWPPALAASVVTVLF 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + EL VV Q + W + P + ++ + Sbjct: 84 LAVTAGTVALIAVPVASQSGELADGVVEGIQR---LREWTAGPPLNIGDDQITGALDTAT 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ + L T + + + F +DG L Sbjct: 141 DRLQNSVGSLLTTLATGVGTVVNGVVTAVLALFLMFF---------FLKDGPRFLPWLAR 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 I+ + + + + + +++G W+ GVP + L V+T + Sbjct: 192 QLPGRLATDATTIAERGWDTLGAFVRSQAAVGLLDAVLIGIGLWILGVPLVLPLAVLTFV 251 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA ++ + L+ + +A + + + +P + + L Sbjct: 252 SAFVPIIGALLAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHA 311 Query: 310 LPTFFGLVGGVRTMGLLG 327 + G G++G Sbjct: 312 AVVLLAVTLGGSLAGIVG 329 >gi|13473951|ref|NP_105519.1| integral membrane transport protein [Mesorhizobium loti MAFF303099] gi|14024702|dbj|BAB51305.1| integral membrane transport protein [Mesorhizobium loti MAFF303099] Length = 662 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 108/343 (31%), Gaps = 20/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +V+LYF + F P+ AL++ F P+ S+ +IA + + Sbjct: 37 IVTAVVALYFGREVFLPIAIALLLTFALAPLVSTLRRVGIPR-----IIAVIGSVFGAFA 91 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--------GMWASELWTKHLS 128 L + ++ L + + + L G + + Sbjct: 92 ALGLFSFIVATQVSVLAQNIPGYQTNILTKIHSLKKTGGEGGIVARLSRVIERVGQEIDQ 151 Query: 129 HPQSLKILSETFLKTNGIDFIPR-----FASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + ++ + R + S +II + F + Sbjct: 152 QEPPAPAADKPQREPVPVEVVARERPLEVLQSLVGTLISPLASAGLIIIVVIFMLLEREE 211 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L + + + K + L ++ + + W+ G+P+ + Sbjct: 212 LRDRFIRLVGYGDLHRTTQALQDAGKRVGQYLLMQLVVNTVYAIPIAIGLWILGIPNALL 271 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLV 301 G++ + +P P+ + ++L + + L+ G + + + P+L Sbjct: 272 WGMLALALRFVPYIGPVIGALLPLFLALAVAPGWSLVLWTAGLFVVMELVTGNVVEPWLY 331 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G L L + G LGL + L + V+ + Sbjct: 332 GSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRH 374 >gi|258516348|ref|YP_003192570.1| sporulation integral membrane protein YtvI [Desulfotomaculum acetoxidans DSM 771] gi|257780053|gb|ACV63947.1| sporulation integral membrane protein YtvI [Desulfotomaculum acetoxidans DSM 771] Length = 362 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 116/314 (36%), Gaps = 4/314 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A+I+ P+ S F + S A V ++ L+ L + E+ Sbjct: 43 LLPFILAVIVSVLLEPLVSFFQLRMRFSRGMAVTSAMVIIIGGAGTLLVLLVLQLVAELI 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL + + L ++G + L D G L +++ Q+ LK I Sbjct: 103 ELSASLDLYMRNGRMIMESLVD-RGINIYGNLPPTAVNYLQTSVASLADNLKLFASKLIN 161 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F L I ++A FF +D +I + + +SR V + Sbjct: 162 AFL-HMVYGIPGIILVGIVSLLAAFFISKDRDTIFRLWRRCVPAPWGERSIDVSREVSRA 220 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 + I+ + + ++ G+ + +G+ +IP G F + Sbjct: 221 FMAYIRSQLILVTITMVQCIAGLYIIGIDYALTIGLTVGFFDLIPVLGPGSVFIPWIAWS 280 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L G+ L + A+ L +V + L +V + L L T + G++ G+LGL Sbjct: 281 LFTGDYGLGIKLSILFALIL-LVRQLLEAKIVSANLGLHPLATLLAIYVGLKVFGVLGLI 339 Query: 330 IGPVLMALIAVIWK 343 +GP+ + + +K Sbjct: 340 LGPMALIALQAGYK 353 >gi|323489471|ref|ZP_08094698.1| putative permease [Planococcus donghaensis MPA1U2] gi|323396602|gb|EGA89421.1| putative permease [Planococcus donghaensis MPA1U2] Length = 351 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 108/325 (33%), Gaps = 2/325 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P++ ALI P + + + + + + + L ++ + Sbjct: 25 ILPVSIPLIVALITAIFLEPFVNFIHKRFKWHRKSAVISVFILFLLVVSALLYWIVTQLI 84 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + V + S L E Sbjct: 85 GRIIQFTKMVPEYTNSLSVMWDEFQRFFFRSTKDMPVEVVSSFETELVGFMEGIRNWVLS 144 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 S + +S I +IALF F D + L + + + Sbjct: 145 IINYDTVSNLLTGIPSFLVSFIVFLIALFLFMLDLPELKTLLFKRLKDSTAEKVRFMFAR 204 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + KVI +++ +V + + ++ I+ IP G+ I T Sbjct: 205 LNKVIFGFLKAQFLVSCIIFIVSLITLAFIVPEYALVMSLVIWIVDFIPILGSIIVLTPW 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 Y I G++ T L + A+ L ++ +T+ P ++G I L L T + G++ +G Sbjct: 265 FAYEFITGDVVFGTQLAVL-ALVLLVIRRTVEPKVMGTQIGLSPLATLIAMFIGLQLLGF 323 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 LG FIGP+++ L + ++ I Sbjct: 324 LGFFIGPLIVILFTSAREAGMIKID 348 >gi|110679325|ref|YP_682332.1| hypothetical protein RD1_2044 [Roseobacter denitrificans OCh 114] gi|109455441|gb|ABG31646.1| membrane protein, putative [Roseobacter denitrificans OCh 114] Length = 355 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 122/328 (37%), Gaps = 16/328 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++LV+L FL P + I + P+ + S I T+ + +F + Sbjct: 17 AVLLVALMFLGDVLLPFVLGGAIAYFLDPVADRLE-RLGLSRVAATAIITLCGLLVFFIV 75 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHLSHPQSLKIL 136 L + + + +LV+ P + +I + S Q Sbjct: 76 ALLVIPALVEQAVKLVN----------VAPEYARNITAFLTERFPTLLDENSAMQRSLHS 125 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ G + + S + L II ++A+ + D +++ ++DSL Sbjct: 126 LGETIQSRGAELLETALSSAASLLNVLILLIIVPVVAV-YLLLDWDNMTAKIDSLLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ + +V+ S GM + + G A +AG+ + +G I ++ IP Sbjct: 185 APTIRQLASQIDQVLASFIRGMGTVCLILGTYYAIALMVAGLQFGLVVGFIAGLVTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A++I L + G + + A+ + + P LVG + L + Sbjct: 245 LGALIGGALAIGLALFQFWGEWMSVGIIVGIFALGQVLEGNVITPKLVGNSVGLHPVWLL 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G +G+ + L A + V+ Sbjct: 305 LALSVFGALFGFVGMLVAVPLAAALGVL 332 >gi|323701853|ref|ZP_08113523.1| sporulation integral membrane protein YtvI [Desulfotomaculum nigrificans DSM 574] gi|323533157|gb|EGB23026.1| sporulation integral membrane protein YtvI [Desulfotomaculum nigrificans DSM 574] Length = 362 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 109/333 (32%), Gaps = 6/333 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + FL P + A+ I F P+ S ++ +++ + Sbjct: 32 LLHAFTFLLPLMVPFVLAIFISFLIEPMVVILQKHVRMSRGPAVALSMLALFSFLGTIIS 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI-PGGMWASELWTKHLSHPQSLKILSE 138 + + E+ +L + + W ++ P +++ S Sbjct: 92 LILLRLVTELIDLSKTLPDVIT---DIRIWFENLLPRLQHLYGELPPAVTNYVQESFGSM 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 I ++ ++A +F +D ++ ++ + H + Sbjct: 149 AQALQVLISKTVNSLLNTFSAVPGIVTLLVVSLLASYFISKDRRALVRKWIKVVPHPYGE 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 + + V S I+ L+ + ++ G + +G++ +IP G Sbjct: 209 KSLDVLKEVFSAFLSYIKAQGILVSISTLISITGLYIIGADYALTMGLLIGFFDIIPVLG 268 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 F + I G L + I L + L +V + L L T L Sbjct: 269 PATVFLPWIAWSFISGADTFGIKLLILYFIVLGT-RQLLEAKVVSDNLGLHPLATLVALF 327 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G + +G +G+ +GP+++ + I K I + Sbjct: 328 LGFKLLGFIGMVLGPIMLIAVQAIAKAGIHTSR 360 >gi|300791109|ref|YP_003771400.1| hypothetical protein AMED_9310 [Amycolatopsis mediterranei U32] gi|299800623|gb|ADJ50998.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 400 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 106/300 (35%), Gaps = 13/300 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I ++ + + L F+ + +L ++ N+ + WL + P + Sbjct: 83 RGLATAIVLIAGLAVLGGLLTFVVTQFSSGLPQLQRQL---NESLNQIKEWLINGPAHLR 139 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E + ++ ++++L + AS G I + L++ I FF Sbjct: 140 -QEQIQQFINQVFGFLQNNQSWLTDTAL----TTASTVGEILTGFLLTLFITI----FFL 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G I L + R + S +A+ + + +G W+ GV Sbjct: 191 SGGEGIWTFLVRVAPGRVRNRVDVAGRRGFASLVSYVRATAAVAVVDAVGIGIGLWIVGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L + + A IP + V++ L+ A + + + L+ Sbjct: 251 PLVIPLATLVFLGAFIPIIGAVLTGGVAVLIALVTNGFIGAVIVLAIVIGVMQLESHVLQ 310 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L+G +KL L + G+ G+ G + ++A++ + + + +++ Sbjct: 311 PLLLGRAVKLHPLSVVLAITVGLVVGGIAGALMAVPILAVLNAGVRSLLHEENPDPAEVN 370 >gi|298374299|ref|ZP_06984257.1| membrane protein [Bacteroides sp. 3_1_19] gi|298268667|gb|EFI10322.1| membrane protein [Bacteroides sp. 3_1_19] Length = 385 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 133/360 (36%), Gaps = 23/360 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ + L+ P L A ++ + P F K S L+++A + Sbjct: 16 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 75 Query: 69 SVMCLFIVPLLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I L+ + E + + + + VP W ++L Sbjct: 76 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVP----------LIPHSWMEYL 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-----YCLSIIFMIIALF-FFYRDG 181 + + E K N + + + A + I + + ++I+F+I+ F F D Sbjct: 126 ESNVNFAQIMELLSKENLLKAVKQIAPQLWSILSNTFSILFSITIVFVILLYFIFILLDY 185 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ L + + + ++ V + F G ++IA+ G++L + + P Sbjct: 186 EKIANGWIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLA 245 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA------IELFIVDKT 295 V LG+ ++ +IP I + + L++ ++G I I D Sbjct: 246 VTLGLFIGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLY 305 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G + L L +G +GL I L L +K I+ + Sbjct: 306 LTPRIMGKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEYNELDS 365 >gi|262044147|ref|ZP_06017220.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038485|gb|EEW39683.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 197 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 6/184 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + II+ L+ ++ F A + +WP+ + T+ + L Sbjct: 18 LFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLLAVLAMTLLLFLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ K++ + +P WL+ +P G W L S Sbjct: 78 FVIPIALLVNSLVDNSVPLI-KLISSGNVTLPDFAWLNSVPLVGDKLYSAWHGLLDMGGS 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + + L ++F + Y G ++ Sbjct: 137 AIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSAL----LYWRGEQVAYGFRYFA 192 Query: 193 EHLF 196 L Sbjct: 193 TRLA 196 >gi|118379196|ref|XP_001022765.1| hypothetical protein TTHERM_00630410 [Tetrahymena thermophila] gi|89304532|gb|EAS02520.1| hypothetical protein TTHERM_00630410 [Tetrahymena thermophila SB210] Length = 730 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 8/194 (4%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F +DY L I + +LF+ S L L KK+ + K I Sbjct: 433 SLFTFLFSIIDYLLQTIIYLTSLFYLL-SSPQFSLNKLLLLLPLEGDIKKKLEFSLEKNI 491 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLL 270 R F I+ ++ + +P V+ ++A+IP IYL Sbjct: 492 RGVFASNLKISFYHIILTWLMLDIFDLPFSFITSVLAGVLAIIPIIPVYFITIPYCIYLY 551 Query: 271 IKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 G+I A + I L +D + I + T + G+ L G+ Sbjct: 552 FSGSILEMAILFVGYAHISLLSID-----AIYSKNIAVHPFITGICVAMGLSVFELKGII 606 Query: 330 IGPVLMALIAVIWK 343 IGP+++ + ++ Sbjct: 607 IGPLIVCSVYLLVD 620 >gi|325001994|ref|ZP_08123106.1| integral membrane protein [Pseudonocardia sp. P1] Length = 445 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 11/315 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I ++++ + + F+ V+ +++ + A+ + V ++ Sbjct: 57 ALIAVGLVIAGWVIGTFWV-VVWPVVLAILLTTVLRPPAGWLIRHRVPPALASIVVLLVG 115 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + Q + +W+S P ++ + Sbjct: 116 IGAVSGLFVAIAPSVAGQTQQITTGVIQAVGQIQQWVSG-PPLNLGDGQIGDIINQVTAQ 174 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S T + + + AS + L L+ FFF +DG + ++ Sbjct: 175 LQQSITAIAGGVLTGVSTVASGLLALVLALVLT--------FFFVKDGPRFLPWISAISG 226 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ + V+ ++++ + + +G L VP + L ++T + Sbjct: 227 RTAGRHLTEVLSRMWSVLGGFIRVQALVSLIDAVFIGIGLVLLSVPLALPLAILTFLGGF 286 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP GA ++ + L+ A + + + + L+PFL G +KL Sbjct: 287 IPIVGAFVAGALAVLIALVTQGFTTAVLVLVLILVVQQVEGNVLQPFLQGQSLKLHGAVV 346 Query: 313 FFGLVGGVRTMGLLG 327 + G G+ G Sbjct: 347 LLAVTAGSSLAGIAG 361 >gi|168184524|ref|ZP_02619188.1| putative membrane protein [Clostridium botulinum Bf] gi|237795256|ref|YP_002862808.1| hypothetical protein CLJ_B2025 [Clostridium botulinum Ba4 str. 657] gi|182672351|gb|EDT84312.1| putative membrane protein [Clostridium botulinum Bf] gi|229261807|gb|ACQ52840.1| putative membrane protein [Clostridium botulinum Ba4 str. 657] Length = 364 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 114/320 (35%), Gaps = 9/320 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P+ F +K + F +I + V+ L I+ + + + Sbjct: 43 LVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFINTFVPKIIKNIG 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L I +W +D ++ ++ ++ L +N + Sbjct: 103 DLFVHSPDYINQTI---QWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI--SNLTNTFL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRI 206 + F + + +F +I + D S+ + L LF + Sbjct: 158 NTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALFGEKNYSKILSFFKE 217 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V +G +I ++ GL+ + + VP + I I MIP P + Sbjct: 218 VDIVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGPFIGMIPA 277 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + N A + ++ I L P ++G + L + F + G T G++ Sbjct: 278 FIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIGGGTFGVM 337 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ + A+I + + I Sbjct: 338 GMFLSVPIAAIIKIYLDKYI 357 >gi|281415381|ref|ZP_06247123.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 438 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 116/326 (35%), Gaps = 24/326 (7%) Query: 13 RWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 R +++ + L L + FF APV L + ++P+ + I + A Sbjct: 33 RMLVIVLTLAGLVLVVQFFQGIASIAAPVFLGLNLVIVAYPLQAWLIRR-GLHPVLGATT 91 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ + V + + G+ + EL Q + V WLS+ Sbjct: 92 TVLLIVAVMGVFGGMMVWSGLELVAELPKYTDRFQQIVLDVSHWLSE------------- 138 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P + + + ++ ++ +I+ +FF D + Sbjct: 139 RGVTPDMVSQQLASIDMSAVTGTAVSAVTKIATNVYAVFGLLVTVIMGMFFLAMDSMDVE 198 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + +R ++ T+ + ++ A L GVP + G Sbjct: 199 RRVRLLST--ARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLDVIALMLIGVPLALVWG 256 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V++ + +P A I ++ L G + + + ++ F++ ++P + G Sbjct: 257 VLSFLTNYVPNVAFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVLNFVLQSVIQPKVAGDA 316 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + +F L+ +G LG + Sbjct: 317 IGVIPTVSFLSLLFWAWVLGPLGAIL 342 >gi|306829411|ref|ZP_07462601.1| membrane protein [Streptococcus mitis ATCC 6249] gi|304428497|gb|EFM31587.1| membrane protein [Streptococcus mitis ATCC 6249] Length = 388 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI K I V + I Sbjct: 42 ISFIFLPVLDFLGIVMLPVILSGLLYYLLNPIVDWMEKHKINR-VLAISIVFVIIGIFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + L++ + Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPSYLEDADRVINDLVTKRLPDDFRPQLEQVLANVSTEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + +++I + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSSFISGASQV----IVAVIIVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGEVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|255009701|ref|ZP_05281827.1| putative transmembrane protein [Bacteroides fragilis 3_1_12] gi|313147487|ref|ZP_07809680.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136254|gb|EFR53614.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 379 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 127/365 (34%), Gaps = 20/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R I ++V L L G P A +I + +P+ F K Sbjct: 1 MERKKITFDSFIRGSICCALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYY-GMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S +++ + + + + + +L + E+ + +V +G Sbjct: 61 FKSRIISIFCALFSITIIGIAIFYLLVPPMLAEIGRMNDLLVTYLTNGAY-----RSGTV 115 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMII 172 SE +H+ +ILSE + + +P+ + I S I ++ Sbjct: 116 PPTLSEFIHRHIDLQALNRILSEENIMNTIKETVPKLWALVAESINILFSVFASFIILLY 175 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F D SI++ L + + + + + F G ++A G++ Sbjct: 176 VVFILL-DYESIAEGWLHLLPGKYRTFASNLVNDIQDGMNRYFRGQALVAFCVGILFSIG 234 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P +ALG+ + M+P I F I ++ G F + Sbjct: 235 FLIIDFPMAIALGLFIGALNMVPYLQIIGFLPTVILAILKAADTGENFWVILAGALVVFI 294 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D L P ++G L L +G+LG+ I L L+ ++ I Sbjct: 295 VVQAIQDGFLVPRIMGKITGLNPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFI 354 Query: 347 MAIKE 351 + + Sbjct: 355 INKER 359 >gi|222529321|ref|YP_002573203.1| hypothetical protein Athe_1330 [Caldicellulosiruptor bescii DSM 6725] gi|222456168|gb|ACM60430.1| protein of unknown function UPF0118 [Caldicellulosiruptor bescii DSM 6725] Length = 351 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 126/359 (35%), Gaps = 16/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL------KGFFAPVLSALIIGFTSWPIYSSFISK 54 M L + + + +I + +YF P L AL + + P +K Sbjct: 1 MHIIKLVKRYFTDILFIALIAIVIYFFTNMKAFWPILIPFLIALFLSYLLKPCVDFLETK 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +I+ + + I+ ++ + E K+L+ + I + +W +I Sbjct: 61 IRSRD-ISILISFAIIFGITIMVFVYFIPLFVSETKQLIQNIPDYI---ILIQKWFFEI- 115 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++L + I E K F+ L + + I Sbjct: 116 DSKLLNKLNIDIKEILNANSINIEGISKQTLSIFL-----NIVKSISSNILYYLLIPIIS 170 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ RD + + L + I + +V+ G + A GL+ + Sbjct: 171 FYILRDWKRLVMWIKWLLPEKYRKEGLYIFVDINRVLHQYIRGQLLDAFIVGLLSFVGFS 230 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L V LGVIT I +IP PI + ++ + + + A + ++ + + Sbjct: 231 LLSVRYAALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSF 290 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 291 IISPRVIGSKVGLHPLTIIIVIILANKIFGFIAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|220916301|ref|YP_002491605.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219954155|gb|ACL64539.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 359 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 116/343 (33%), Gaps = 19/343 (5%) Query: 9 QGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + R + + + L+ + P + + + P+ ++ + S T A+ Sbjct: 16 RATARALTVLAVAAGFGFLWLARDLLVPTALGVTLALSVHPVVAALERR-GLSRTLAAIA 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + L + + + ++ + A+ L + Sbjct: 75 GTLLTVAV----LAAIGWVLWDRIAAFAQELPGYEGRLREAAAGIRR-----HAAHLQAQ 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q+ + E ++ L ++ L+F +G Sbjct: 126 SEQLVQTPRRPGEVKVQETVPW--GTLLVGTAQGALTLAGQATVVVFVLYFTLAEGPRFR 183 Query: 186 QQLDSLGEHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +L + + + ++ + + + + L + G+V + Y L G+ Sbjct: 184 VKLLAWADRRPRGRARLLAALEELHRDVEQYMLNRVALNAILGVVTWAVYALYGLEHAAI 243 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+ TA++ IP G A F ++ LL G + + + + + + P + Sbjct: 244 WGITTALLHFIPYVGPALGLFLPTAMALLQYGTAKDVALVAAIYLVLVNVQGNVVDPLFL 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G ++L L F G + G +GLF+ L++ + ++ + Sbjct: 304 GKQLRLSPLVVFLGSLFWFWLWGPVGLFLAVPLLSTVRIVCRH 346 >gi|149202228|ref|ZP_01879201.1| membrane protein [Roseovarius sp. TM1035] gi|149144326|gb|EDM32357.1| membrane protein [Roseovarius sp. TM1035] Length = 347 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 121/341 (35%), Gaps = 18/341 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + V L+FL P + I + P+ + S V+ T+ + F+V Sbjct: 9 AVFFVLLWFLGDVILPFVLGGAIAYFLDPVADRLE-RMGLSRAASVVVITLIAILAFVVI 67 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL--WTKHLSHPQSLKI 135 +L + + + L + V L+ G ++ + S + Sbjct: 68 VLLIVPSLVNQAVALFN-----------VAPELARDLHGFLSTHFPALFEPDSALNKTLL 116 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ G + S ++ + ++ + + + D ++ ++D L Sbjct: 117 SLGETIRERGGQLLETLLSS-AASMVNILILLVIVPVVAVYLLYDWDNMIAEIDHLLPRD 175 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + + S GM + + G A L G+ + +G I ++ IP Sbjct: 176 HAPVIRSLAGQIDNTLASFIRGMGTVCLILGTYYAVALMLVGLQFGLVVGAIAGLITFIP 235 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF---IVDKTLRPFLVGGPIKLPFLPT 312 I +++ L + + + L A+ + I L P LVG + L + Sbjct: 236 YVGSIVGGVLAVGLALFQFWGDWVSVGLVAAVFVSGQVIEGNFLTPKLVGSSVGLHPVWL 295 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A + VI + ++ ++++ Sbjct: 296 IFALSAFGALFGFVGMLVAVPVAASLGVIARFALEQYRDSR 336 >gi|91223519|ref|ZP_01258784.1| permease PerM [Vibrio alginolyticus 12G01] gi|91191605|gb|EAS77869.1| permease PerM [Vibrio alginolyticus 12G01] Length = 357 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 114/350 (32%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + T +I Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKMC--RIGVPRTLSVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ L L ++ L++ + L + Sbjct: 73 VILVFVGLMLIALFGLVPTIWTQVGNLINDIPNMYNG-------LQKFIVTLPERHPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + I + +I + + +FF +D + Sbjct: 126 NLEIVETVVTNAKNQALGLGESVVKGSLASLVSIAT-LAVYLILVPLLIFFLLKDKEEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + L + L Sbjct: 185 RIASGILPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFALLDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L L I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPPFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSTEENEP 353 >gi|307325861|ref|ZP_07605061.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306888649|gb|EFN19635.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 370 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 15/322 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 V AL+ P+ +A + + + L + E Sbjct: 62 VAVFLALVATALLRPLADLLARVLP--RPLAVALAVFGTLFVVLGLLALVGNAAAGEAGR 119 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV ++ + RWL P + L H +F+ + I R Sbjct: 120 LVGELRGGISR---IERWLEGPPFHVRRGVLSGTHD--------KVTSFVSRHRATLISR 168 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S G ++ ++ + FF G + + + W + +R Sbjct: 169 ALSSAGR-VVEAGTALFLALFCSIFFIHSGDRMWRWFRGQLPERARSPWDRAARAAWTTF 227 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 G+ ++A ++G A L VP + L ++ +P G+PI+ ++ L Sbjct: 228 AGYTRGIIVVAASNAALVGIALSLLRVPLALPLTLLVFFATFVPLIGSPIALAVATVVAL 287 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 A + L L P ++ ++L + ++ G G++G + Sbjct: 288 AGRGPAIAAVVLLLIVAVGQFEGHVLHPLVMSWAVRLHPVVVAISVIAGSIVAGVIGAIV 347 Query: 331 GPVLMALIAVIWKESIMAIKEN 352 ++++ + + + Sbjct: 348 AVPMVSVAWSVTRALRRRPPDE 369 >gi|298388101|ref|ZP_06997646.1| membrane protein [Bacteroides sp. 1_1_14] gi|298259131|gb|EFI02010.1| membrane protein [Bacteroides sp. 1_1_14] Length = 377 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 120/334 (35%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ + ++ L + L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCALFLITLVGISLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +VS++ N + + SE +++ +ILSE + Sbjct: 87 --VPPMVSEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRILSEENILAAIK 144 Query: 147 DFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D I++ L + + + + Sbjct: 145 DTVPRVWALLAESLNILFSILASFIILLYVIFILL-DYEVIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTVLLAILKAADTGENFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ + Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKER 357 >gi|291563071|emb|CBL41887.1| sporulation integral membrane protein YtvI [butyrate-producing bacterium SS3/4] Length = 369 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 120/330 (36%), Gaps = 5/330 (1%) Query: 16 IMFIILVSLYFLK--GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + LV ++ L+ FF P + I+ + P+ F + + +++ V+ L Sbjct: 17 LLTVYLVCVWGLRLVVFFLPFVIGWIVAAIANPVVRFFEKRLKIVRRHGSMVLIAGVLAL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + LF + EM E + + I L+ G L + S Sbjct: 77 VIFGIYALFSWVFREMTEF-GQALPGIYASIREEVDLACERIGGLLKYLPADTETTIISE 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ SR + ++ I + ++ + F D + + + + Sbjct: 136 LENVGGYIGDFVQKIAASAGSRVVRTLPEVFVNTIIVFLSSYLFLADHDKLVETVRKVMP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 Y + + + +I FL I +VL VP + LG+ AI+ Sbjct: 196 GPVIKYGRMMKNDIRTLIGGYFLAQFKIMFVVAVVLVIGMLFLRVPYGIFLGIAIAILDF 255 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + ++ L G A L + + + + ++P +VG + LP L T Sbjct: 256 LPMFGTGTALIPWAVVRLFTGEYGYALSLVILYVLTQG-IRQVIQPKIVGDSMGLPPLAT 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 F L G + G+ G+ I + L + Sbjct: 315 LFFLYLGFKFRGIAGMIIAVPVGILFIRFY 344 >gi|168243266|ref|ZP_02668198.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466761|ref|ZP_02700615.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630801|gb|EDX49393.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205337593|gb|EDZ24357.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 355 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|309775952|ref|ZP_07670944.1| membrane protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916234|gb|EFP61982.1| membrane protein [Erysipelotrichaceae bacterium 3_1_53] Length = 401 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 100/328 (30%), Gaps = 22/328 (6%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFLFY 83 P + I F ++ + AV+A + + + L L Sbjct: 48 TPFILGFAIAFLLNKPMELIETRLLGKVPMKPQHKRSIAAVLAVILGITIVCAFLALLLP 107 Query: 84 YGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + LV ++ + + L L Sbjct: 108 QLFDSIFSLVKAFPGYVEDFQKFALDFVERYAIDTKQVTNYITETDFFEKLTGFVTDALP 167 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ F L+I+ I+A + D +S + LFP + Sbjct: 168 ---------QMAKATYAFGSTLLNILLSIMAGLYMLIDKERLSGYAKKINYALFPTEVSE 218 Query: 203 ISRIV----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + +G I ++ G++ + P + L VI + MIP Sbjct: 219 YLHRMVLASGDIFNNFIVGKAIDSLIIGVLCYIGSLIFQFPYALLLSVIIGVTNMIPVFG 278 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I +L + A L+ L P ++G + LP + F + Sbjct: 279 PFIGAVPGIVILFIIHPITALYFALFIFALQQFDGNILGPLILGDKLGLPSIGILFSVCV 338 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESI 346 G G++G+FIG A+I + KE + Sbjct: 339 GGGLFGVIGMFIGVPCFAVIYMAVKEFV 366 >gi|313204814|ref|YP_004043471.1| hypothetical protein Palpr_2353 [Paludibacter propionicigenes WB4] gi|312444130|gb|ADQ80486.1| protein of unknown function UPF0118 [Paludibacter propionicigenes WB4] Length = 377 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 120/328 (36%), Gaps = 9/328 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A ++ + PI F K S L++IAT+ + I+ L+ + + Sbjct: 37 LLPFLVAWLLAYLLQPIVKLFQHKLRFKSRVLSIIATLILFFGSIIGLISILAPIVSLEV 96 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + +S+++ A I V ++ + + HL LK + + Sbjct: 97 QKLSQLIGAFSKTIDVNTFIPA--AWQDEIKYYLTHLDFQTLLKDQNIMEGFKKLAPGLW 154 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F + + + + +I + +F D I+ + + +I + Sbjct: 155 SFINGSLDFVMGFSVIVIVFLYLVFILL-DYEKITSGFYGIIPPKYKTLITEILSDLESG 213 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + F G +IA+ ++ + + +P + LG++ + ++P ++ + L Sbjct: 214 MNRYFRGQALIALIVAILFVIGFSIIQLPLAIILGLLIGALTLVPYLKALALIPCGVMGL 273 Query: 271 I----KGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + G F + L + + I D L P ++G L L MG Sbjct: 274 LQAAETGRNFGSILLGIAIVFTVIQVIEDMVLTPKIMGKVTGLNPAVILLSLSVWGSLMG 333 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G+ I + L+ +K ++ ++ Sbjct: 334 MVGMIIALPMTTLMISYYKRFVLNDEDE 361 >gi|94496502|ref|ZP_01303079.1| hypothetical protein SKA58_09926 [Sphingomonas sp. SKA58] gi|94424248|gb|EAT09272.1| hypothetical protein SKA58_09926 [Sphingomonas sp. SKA58] Length = 392 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 115/315 (36%), Gaps = 13/315 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P+ +AL+I P+ + S A+++ + + + L+ + Sbjct: 50 FFLPLTAALVIAIALVPLLEWMERR-GLPSGVAALLSVIGFLLVANTALVLIVVPATDWF 108 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L ++ + PV S++ + E + P + + + + F Sbjct: 109 SALPQRLPQIQANLAPVIDLYSNL--QRFVDETLQMLATGPVAAAQTAVVDAPRSLLQFA 166 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGEHLFPAYWKKISRIVP 208 A + ++F ++ ++FF + ++ ++S G ++ + V Sbjct: 167 ATSAPA-------AIIQMVFALLIIYFFLAGWTRLRRRTINSRGSFDGAMAVARVIQNVV 219 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVS 266 + + + I + GL + A WL G+PS + G I A++ +P P+ + Sbjct: 220 DATSAYVITIATINLCLGLAVAVALWLIGMPSPLMWGGIIALLNFVPYFGPMLAAALLAL 279 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L++ +++ A + + P L+G + + L L G Sbjct: 280 GGLMVFDDVWFALLPAALQIAFHLVEANVVTPMLLGRRLTMNPLLILVSLTFWGWVWGTP 339 Query: 327 GLFIGPVLMALIAVI 341 G +G L+ ++ + Sbjct: 340 GALLGVPLLIILQTV 354 >gi|154243769|ref|YP_001409342.1| permease-like protein [Xanthobacter autotrophicus Py2] gi|154162891|gb|ABS70106.1| permease-like protein [Xanthobacter autotrophicus Py2] Length = 239 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 33/73 (45%) Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + L G + + +D LRP LVG +LP VGG+ +G+ G Sbjct: 157 ALISDYLTGAILLAVGVLVISTIDNFLRPALVGRGRRLPDYVVLISTVGGLSLIGMNGFV 216 Query: 330 IGPVLMALIAVIW 342 IGP++ AL W Sbjct: 217 IGPLIAALFVADW 229 >gi|291535177|emb|CBL08289.1| sporulation integral membrane protein YtvI [Roseburia intestinalis M50/1] Length = 368 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 116/335 (34%), Gaps = 16/335 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F A A+++ + +AV + + V L F Y Sbjct: 37 VLFPFLAAFAVAVLLSGAV----QFIAERMHIQRGIVAVAVVLFFYIILAVFLYFAGSYL 92 Query: 86 MLEMKELVSKVVLANQHGIPVP-----RWLSDIPGGMWASEL-----WTKHLSHPQSLKI 135 + + + ++ + I +WL + +EL + + + Sbjct: 93 VRLIYDTARELSVFFSDTIVPVMQRFYQWLDRFVSVFYPTELTGKTSGLHGVGEESAQTL 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L + D + S + + ++ +IA F + I L Sbjct: 153 KNAGKLMSGISDGVIDGVSGMAAGIPGFFMKLLIAVIATVFMELEFPEIKAFLKRQIPAE 212 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ V + L +I L + +L G+ + A+ I A++ ++P Sbjct: 213 YQRAFRDGKNYVTGTMGKCILSYCLIFGMTFAELTAGLFLLGIKNAFAIAFIIAVLDILP 272 Query: 256 G-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G ++ G I +F + + +V + P LVG + L + Sbjct: 273 VLGTGTVLIPWAVLAFASGRISTGVGVFGLY-LVITVVRNLIEPKLVGKQMGLSPVIMLP 331 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ G++ G++GLF+ P+L++ + + I+ I Sbjct: 332 CMLIGLKFFGIIGLFVVPLLVSFLKQLNDRGIIKI 366 >gi|328885460|emb|CCA58699.1| putative membrane protein [Streptomyces venezuelae ATCC 10712] Length = 374 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 109/330 (33%), Gaps = 14/330 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G +L A + P ++ + +V+ + ++ L Sbjct: 29 LVGLLVNILLAFFLALAIEPAVGRMAAR-GMRRGLATFLVFFAVLIFGVGFVVLLGSMLA 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ++V Q+ + W+++ + ++L + + +++ + Sbjct: 88 GQIVDMVENFP---QYLDSLINWINE----NFHTDLSRVEVQDSVLSSEWLQKYVQNSAA 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + A+ G +F + + F+F DG + + L S+ + I Sbjct: 141 GVLDVSATVLGGLFRLLTIFLF-----SFYFAADGPRLRRALCSVLPPARQTEVLRAWEI 195 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAV 265 ++A+ G+ + + GVP AL V +++ IP A+ Sbjct: 196 AVDKTGGYLYSRGLMALISGVAHFVLFEILGVPYAPALAVWVGLVSQFIPTIGTYLAGAL 255 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + N + A + + + + L+P L + + F ++ G +G Sbjct: 256 PMLIAFTVNPWYALWVLGFVVVYQQFENYVLQPKLTSKTVDIHPAVAFGSVIAGTALLGA 315 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G I +A + + + Sbjct: 316 VGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|291550167|emb|CBL26429.1| Predicted permease [Ruminococcus torques L2-14] Length = 467 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 118/390 (30%), Gaps = 33/390 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYF-------------LKGFFA---PVLSALIIGFTSW 45 R Q I + F++ + F K F P++ L I + Sbjct: 35 RRYSFKEQAIKSMTLFFVVATCILFYFALLRLGQISSVFKQFLTVAKPIIYGLAIAYLLN 94 Query: 46 PIYSSFISKKEE---------------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PI + S ++ + ++ L I L + ++ Sbjct: 95 PIVKWIDRRMIPLLEKHCPKLKKKKQISRGVGIFVSVILMLALIITLLNMMIPELYGSIR 154 Query: 91 ELVSKVVLANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +++ V I + SD G + + + Q+ + Sbjct: 155 DMIFTVPSQMNRFIHEFSKMHSSDSTVGKMLASIVEEASDFVQNWMKTDLMEKVNLWMTQ 214 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + ++ + II I LF + + + ++ +I Sbjct: 215 LTVGMIQMVREVFNFIIGIIVSIYVLFSKEKFQKQTKKLIYAVFRPGQANMILQIGGKSN 274 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 ++ +G I ++ G++ + +P + + VI + +IP P S Sbjct: 275 EIFGGFIIGKIIDSLIIGVICFIGLSILNMPYTMLVSVIVGVTNVIPFFGPYIGAIPSAI 334 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ + ++ L P ++G L F ++ G+ G+ Sbjct: 335 LILLADPLKGLYFIIFVIALQQFDGNVLGPKILGNSTGLSSFWVVFSILIAGGLFGIPGM 394 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 G A+I I + +I + KE + Sbjct: 395 LFGVPTFAVIYYIVNMLVNSILKKKELPTD 424 >gi|320008172|gb|ADW03022.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 377 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 110/352 (31%), Gaps = 22/352 (6%) Query: 13 RWMIMFIIL--------VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 R MI+ + L + Y L G +L A + P S + Sbjct: 7 RAMILALTLYGCFQLGSWAFYQLIGLLTNILIAFFLALAMEPAVSRMAGR-GIRRGLATF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++V+ I ++ L ++ ++V + ++ V W++ + Sbjct: 66 LVFIAVLVAAIGFVVLLGSMLAGQIVDMVEEFP---KYLDSVINWVNQTFHTELSRVEVQ 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L H L+ + L ++ + + F+F DG + Sbjct: 123 DSLLHSDWLQRYVQNS---------ATGVLDVSTTVLGGLFRLLMIFLFSFYFAADGPRL 173 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L S+ A + I ++A+ G+ + VP AL Sbjct: 174 RRALCSVLPPSRQAEVLRAWEIAVDKTGGYIYSRGLMALISGVAHYVLLVVLDVPYAPAL 233 Query: 245 GVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +++ IP A+ + + + + A + + + + L+P L Sbjct: 234 AVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYALQPKLTSK 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + F +V G MG +G I +A + + + Sbjct: 294 TVDIHPAVAFGSVVAGTALMGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|332159160|ref|YP_004424439.1| hypothetical protein PNA2_1519 [Pyrococcus sp. NA2] gi|331034623|gb|AEC52435.1| hypothetical protein PNA2_1519 [Pyrococcus sp. NA2] Length = 326 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 136/346 (39%), Gaps = 33/346 (9%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ + + II +++ + FF+P+ A I + PI++ + ++ A+ Sbjct: 1 MNMNDIVIGAVALIIIALAIKTIAPFFSPLFFAFITAYALTPIHAKLEKRIGSRNS--AI 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ ++ L+ L Y + + + + I +P Sbjct: 59 VLTSILLFGALMILVVLIYTLTPVISQAYNYLSNLENLTIEIP----------------- 101 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S+ L + L G + + L + + F FF + G + Sbjct: 102 FIPSNIFELIKNATDKLIEVGKESLISVTFSVPKYLLQVVVYLAF---VYFFLTKMGEA- 157 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA---GVPSH 241 KI +++ ++ I +G+++ + L +P+ Sbjct: 158 -----KSLLTFEDEKLMKIISKGNLTLQALVRVWLLLNIAKGILMTLGFLLFRVSDIPTA 212 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 + G++T + + +P + + S+YL+ +G++ A L ++G + + D T+RP Sbjct: 213 ILAGLLTVLFSFVPLFEGWMIWLIGSLYLIREGHLLTAIGLAVYGFSLVSPLPDFTIRPK 272 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV K + G++GG +GL GL IGP+++ + + KE Sbjct: 273 LVAREAKFNEVIVLIGMIGGTLGLGLKGLIIGPIVLNVALEMLKEW 318 >gi|253572141|ref|ZP_04849545.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838321|gb|EES66408.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 377 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 120/334 (35%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ + ++ L V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCALFLITLVGVSLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +VS++ N + + SE +++ +ILSE + Sbjct: 87 --VPPMVSEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRILSEENILAAIK 144 Query: 147 DFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D I++ L + + + + Sbjct: 145 DTVPRVWALLAESLNILFSILASFIILLYVIFILL-DYEVIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTVLLAILKAADTGENFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ + Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKER 357 >gi|269955017|ref|YP_003324806.1| hypothetical protein Xcel_0209 [Xylanimonas cellulosilytica DSM 15894] gi|269303698|gb|ACZ29248.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 399 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 110/335 (32%), Gaps = 18/335 (5%) Query: 16 IMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ + V L L+ V +A + P S + A + + Sbjct: 32 LIALAAVVLQVLRAGSSLLFIVFTAWFVSLAMEPAVSRLARRMPRG---AATGVVMLGVL 88 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 F+ LF +++ ++ S V ++ G ++ + + Sbjct: 89 GFVALFSALFGNLVVQ--QVTSLVETIPSLVDQALDYVDQQFGVRYSLDDLLAQVQQNAG 146 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + F+ A G + + LF+ DG + + + SL Sbjct: 147 SAASVAGTVAGGILSFVGALAGAVG--------TFFIFALLLFYLSADGPRLRRWIASLF 198 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + ++A G + + + G+PS +AL + T I+A Sbjct: 199 PPRAQEATLVVWDTMAEKTGRYVGARLVLATVNGTLSAIVFAIIGLPSWLALALWTGIVA 258 Query: 253 -MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP G IS + + N + + WG + + + T P + + + Sbjct: 259 QFIPAIGTYISIALPVLVGALSPNPWLGLIVLGWGVLYQQVENLTFEPRISARAVNVNPA 318 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +F ++ G G+ G + ++A++ + Sbjct: 319 VSFSSVILGTSMFGVAGALLAIPVVAMLLALLDLY 353 >gi|254523945|ref|ZP_05136000.1| permease [Stenotrophomonas sp. SKA14] gi|219721536|gb|EED40061.1| permease [Stenotrophomonas sp. SKA14] Length = 389 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 130/348 (37%), Gaps = 16/348 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++ ++ L P + AL + + P+ + V+ + Sbjct: 19 ILFAGLVGWVVWLLAPILTPFVLALALAWLGDPLVDRIEATGRSR--------MTGVVLV 70 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQ 131 F +L + ++ + + ++ WL IP + L P Sbjct: 71 FAAMVLVIVALLLVLVPMIERQITTLIAVAPQAQAWLMEKGIPWFEQKTGLEVMQWLDPD 130 Query: 132 SLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + G + SR G + + ++I+ + I F+F RD + +++ Sbjct: 131 RLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ ++R +V+ + G ++ + G++ L G+ + +G+I Sbjct: 191 SVIPRNHIGTISALARESNEVLGAFIRGQFLVMLALGVIYAGGLSLVGLKLGLLIGLIAG 250 Query: 250 IMAMIP---GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +++ IP I V+ + +G ++ + + + + L P +VG I Sbjct: 251 LISFIPYLGATTGILMAVVAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ + + A+ V+ + + ++++ Sbjct: 311 GLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSE 358 >gi|161612754|ref|YP_001586719.1| hypothetical protein SPAB_00453 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362118|gb|ABX65886.1| hypothetical protein SPAB_00453 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 352 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 7 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 66 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 126 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 177 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 235 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 236 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 296 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 342 >gi|313885148|ref|ZP_07818900.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619839|gb|EFR31276.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] Length = 421 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 112/325 (34%), Gaps = 4/325 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P+++A I+ + P+ + E + + ++ V+ + L L + Sbjct: 56 FGLPLIAAAILYYLLAPVVRWMTGQGIERNVSIWILFISLVLLIVWGILS-LVPILRTQF 114 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + L + + + L IP L + S + + + I Sbjct: 115 QGLAENLPYYAKQLDKL---LDTIPIDWSNDPLLSGIGSFVEDFDFSALSSRMETIISTT 171 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 L ++ M I L++ +G + + + + + +I Sbjct: 172 FGSLGTVIGNITQVVLGLLTMPIVLYYMLLEGNKLPKHVLYYLPNRYRETAARIIYESHS 231 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I G I+AI ++ Y + G+ ++ + +IP I + Sbjct: 232 QISRYIRGQIIVAIIVAIIFAVGYSIIGLDYGISFAIFAGFCNVIPYLGSFIAVIPVIII 291 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + + + +IE FI + + P ++G +++ + L+G R G+ G+ Sbjct: 292 AVLTSPLMLLKVLIVMSIEQFIEGRFVSPQILGSNLQIHPVTILVVLLGAGRLFGIAGVI 351 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 +G A++ V E + + E Sbjct: 352 LGVPGYAVVKVFVSELYQVYRNHSE 376 >gi|115374275|ref|ZP_01461560.1| hypothetical protein STIAU_0634 [Stigmatella aurantiaca DW4/3-1] gi|310818211|ref|YP_003950569.1| hypothetical protein STAUR_0938 [Stigmatella aurantiaca DW4/3-1] gi|115368696|gb|EAU67646.1| hypothetical protein STIAU_0634 [Stigmatella aurantiaca DW4/3-1] gi|309391283|gb|ADO68742.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 375 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 98/303 (32%), Gaps = 17/303 (5%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ +K + ++ + L L + + + LV + P ++ Sbjct: 59 WLQRKGLRRGVAVALVFLTGLGLVAALLTTFVPMLVQQGQSLVREA----------PDYI 108 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + W +L ++ + + L + + I + Sbjct: 109 EQLKHQRWVEQLDARYDLIARVSAETRQRLPGAAMPML------GVVTDILHHLAAFITV 162 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ FF G + + YW+ ++ + + S G I++ G V Sbjct: 163 VVLTLFFLCFGKEVFDKALLWLPPPERGYWRGLALRMHHTVGSYVAGAFCISLIGGGVTM 222 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 L GVP V LG+ A++ ++P G + V G + Sbjct: 223 VTLLLLGVPYFVPLGLAMAVLGLVPFLGPLLGGVLVVATAYASGGNRVGLIALGVFLLYQ 282 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + L+P + +++ L ++ G G+LG + + + V+ ++ + Sbjct: 283 QVENHLLQPIIQRHTLRMSPLLIALAMLVGTAFAGVLGALLALPVAGAVQVVAQDRLARR 342 Query: 350 KEN 352 E Sbjct: 343 HER 345 >gi|296535051|ref|ZP_06897315.1| possible permease [Roseomonas cervicalis ATCC 49957] gi|296264622|gb|EFH10983.1| possible permease [Roseomonas cervicalis ATCC 49957] Length = 370 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 114/326 (34%), Gaps = 9/326 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P+ + S+ A++ +M L ++ LL L+ + ++ Sbjct: 41 LTPFVLAACIAYFLDPLATRL-SRLGVPRGLAALVLVTGLMGLALLALLLLYPLIIAQVG 99 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ A + L+ + T+ S +FL I Sbjct: 100 TLLARLPSYAAGIASALQEALAGLEERFGPEVFDTRLRDLAVSQIGAILSFLGAAATRLI 159 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G ++ + F+ RD I +L+S A ++++R + Sbjct: 160 GG-----GYALFSVFTLVVVTPVVAFYLLRDWPRIMLRLESWLPRRSAAVLRQLARDTDR 214 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 V+ + G + G+ + +G+ + +++ IP + A ++ L Sbjct: 215 VLSAWLRGQLLCCALLAAYYAVGLSAVGLELGLMVGLASGLLSFIPYVGSATGLATALLL 274 Query: 270 LIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + G + I + P L+G ++L + F L G G LG Sbjct: 275 AVGQFGTWDGVGLVAAVYVAGQTIEGYIIYPRLLGDRVELHAVWVIFALFAGGVAFGFLG 334 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 + + + A + V+ + + E+ Sbjct: 335 VLLAVPMAAALGVLARYWLRRYLESP 360 >gi|160947670|ref|ZP_02094837.1| hypothetical protein PEPMIC_01605 [Parvimonas micra ATCC 33270] gi|158446804|gb|EDP23799.1| hypothetical protein PEPMIC_01605 [Parvimonas micra ATCC 33270] Length = 400 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 127/340 (37%), Gaps = 4/340 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + M + + L+ L++++I + P F K + + +I + + Sbjct: 56 LSVFFMIFLFKNYSILRITLVTFLASVVIAYILNPFMKFFERKNIKRIYAIILIYIIIAL 115 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F++ + +F + K L+ + ++ + + + +S Sbjct: 116 AIFVL-GIGIFPSTFKQFKHLLFSLPDLVKNFVDYSDSIRK--SLFTDTPFINNMISSIN 172 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L ++ ++ + F+ + +I + + F+ + I + + Sbjct: 173 GQLVKIANTLLSSSASWVTGMVAGI-SGFIAVIIQLILIPVITFYLLLEKDKILEAISKR 231 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +I R + + + G I+AI G+ L G+ +GVIT + Sbjct: 232 VPDRYENFLVRIWREIDESLSMFVRGRIIMAIFVGVATMIYLMLFGIEFSFVIGVITCVA 291 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ L + F A + + ++ + L P ++G + L Sbjct: 292 DIIPYIGPFLGFVPAVLLALFKGPFTAFWVAVLFCFVQWLENNILGPKILGDSTGMHPLI 351 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G G+LG+ + A+I +I+K + +K+ Sbjct: 352 VLILLIIGGGMFGVLGMIFSVPVAAVIKIIYKHTKPYVKK 391 >gi|260757693|ref|ZP_05870041.1| LOW QUALITY PROTEIN: DUF20 domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260668011|gb|EEX54951.1| LOW QUALITY PROTEIN: DUF20 domain-containing protein [Brucella abortus bv. 4 str. 292] Length = 382 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 126 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 186 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 246 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 306 SVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|254718848|ref|ZP_05180659.1| hypothetical protein Bru83_04800 [Brucella sp. 83/13] gi|265983833|ref|ZP_06096568.1| permease [Brucella sp. 83/13] gi|264662425|gb|EEZ32686.1| permease [Brucella sp. 83/13] Length = 382 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 126 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 186 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 246 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 306 SVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|148379812|ref|YP_001254353.1| hypothetical protein CBO1852 [Clostridium botulinum A str. ATCC 3502] gi|168180430|ref|ZP_02615094.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|226949096|ref|YP_002804187.1| hypothetical protein CLM_2012 [Clostridium botulinum A2 str. Kyoto] gi|148289296|emb|CAL83392.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|182668893|gb|EDT80871.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|226842378|gb|ACO85044.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto] Length = 364 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 9/320 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P+ F +K + F +I + V+ L I+ + + + Sbjct: 43 LVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFINTFVPKIIKNIG 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L I +W +D ++ ++ ++ L +N + Sbjct: 103 DLFVHSPDYINQTI---QWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI--SNLTNTFL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRI 206 + F + + +F +I + D S+ + L L + Sbjct: 158 NTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALSGEKNYSKILSFFKE 217 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V +G +I ++ GL+ + + VP + I I MIP P + Sbjct: 218 VDIVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGPFIGMIPA 277 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + N A + ++ I L P ++G + L + F + G T G++ Sbjct: 278 FIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIGGGTFGVM 337 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ + A+I + + I Sbjct: 338 GMFLSVPIAAIIKIYLDKYI 357 >gi|153213247|ref|ZP_01948659.1| permease PerM, putative [Vibrio cholerae 1587] gi|124116047|gb|EAY34867.1| permease PerM, putative [Vibrio cholerae 1587] Length = 354 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 121/349 (34%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T +I Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTLAVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQ---KFITSLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 126 HLEIVESVISNAKNKVLGMGESVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGILPR-NRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +WK +E Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEP 352 >gi|147677594|ref|YP_001211809.1| permease [Pelotomaculum thermopropionicum SI] gi|146273691|dbj|BAF59440.1| predicted permease [Pelotomaculum thermopropionicum SI] Length = 351 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 117/335 (34%), Gaps = 4/335 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +++++ ++ P L A + PI K S + A V V Sbjct: 18 AVVVIIAFNYILPILVPFLIAFVFSVLMEPIIRVLEQKARFSRGPATMAAMVLFFGGIAV 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + E+ +L + A + + + S S Q++ L Sbjct: 78 VFSVLVLQLVAELIQLSLSLPAAAAEFRNYYQVFIEKITAFYISLPPGVISSIEQNISTL 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ + + F + ++ IIA +F RD + I + L + + Sbjct: 138 TDSL--QGLVSRMANSLMMFVSLVPGTLTVLVVSIIATYFLARDRYLIIKFLMRVFPSPW 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + ++ + ++ + +L G + +G++ +IP Sbjct: 196 GEKAVAVIQDMSAAFIGYLRAQAVLVLITTVLSVTGLYLIGAKYALTIGLLVGFFDLIPV 255 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + I+ + G + + I L + + L +V + L L T Sbjct: 256 LGPATVYIPWVIWSFVTGATAFGVKIAVLYLIVL-LTRQFLETKIVSANLGLHPLATLIA 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++TMG+ GL +GPVL+ + I K K Sbjct: 315 MYAGLKTMGISGLIMGPVLLIALQSIVKTVFFTSK 349 >gi|76801133|ref|YP_326141.1| permease [Natronomonas pharaonis DSM 2160] gi|76556998|emb|CAI48572.1| homolog to predicted permease [Natronomonas pharaonis DSM 2160] Length = 331 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 126/339 (37%), Gaps = 25/339 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + + ++ ++ I +++ L V A+ + + +P +++ Sbjct: 2 SSLRHRRYVLGGLLAAIGVLAAAVLWNVVGTVFFAVTVAYVLYPARQRLVNRGVPRR-VA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + T + +V L + + + ++ +L+++P + Sbjct: 61 SGLLTAAAFLTVVVLLAPIAWTIFRQRGAIL--------------EFLNNLPDELPVEAF 106 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L D + A + L ++ + L+ Sbjct: 107 GFVVTIDVADLVD--------TTADTLQSIAISLAADAIFLALQLLMFALVLYGLLLRPN 158 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + + + R + + + ++ A+ + ++L G P Sbjct: 159 AVGRAAFRVTPSPYHDILVALHRRIAGTLYALYVIQAATAVITFPLALIVFYLLGYPDVF 218 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFL 300 L V+ A++ IP G + ++ + ++ G A + + G + + ++ D +RP L Sbjct: 219 VLAVLAALLQFIPIVGPGMLAAGLAGHDVLVGMPHRAVGVIILGPLFVGLLPDLLVRPRL 278 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 KLP F G VGGV T+G++G+ GP+++AL+ Sbjct: 279 AASKAKLPASLYFVGFVGGVLTVGVIGIIAGPLVVALLV 317 >gi|160885072|ref|ZP_02066075.1| hypothetical protein BACOVA_03070 [Bacteroides ovatus ATCC 8483] gi|156109422|gb|EDO11167.1| hypothetical protein BACOVA_03070 [Bacteroides ovatus ATCC 8483] Length = 374 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 123/334 (36%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ ++LSE + Sbjct: 87 --VPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEENILAAIK 144 Query: 147 DFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D +I++ L + + + + Sbjct: 145 DTVPRVWTLLAESLNILFSILASFIILLYVIFILL-DYEAIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|56962071|ref|YP_173794.1| hypothetical protein ABC0291 [Bacillus clausii KSM-K16] gi|56908306|dbj|BAD62833.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 364 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 112/339 (33%), Gaps = 12/339 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI + + F P++ +L+I + P + K +I +++ L Sbjct: 25 LVNFIFMPIAVLFQTLFTPIVISLVIYYLLRPFVNLLNKKL--HRGLSILIVFLALAGLA 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL++ + V V L + + L Sbjct: 83 TTALLYVGPLLQEQFMTFVDNVPGYAND-------LHHLFVDLQKQPALQNFLESTDFSL 135 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSL 191 L N ++ G +I + LF+ ++G + + Sbjct: 136 DELSGTLTENLQGYLQSIIDSIGTFIGAVANVVIIAVIIPFVLFYMLKEGKKAPMMVINQ 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K++ + K + S G +++ G++ Y + + + L ++ Sbjct: 196 FPAREQEEGKRVLGDLDKALSSYIQGQILVSACVGVLCLIWYLIIKLDYALILALVALFT 255 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P TA ++ + + + A + + I I P ++G + + L Sbjct: 256 NVIPFIGPWIGTAPAVIVALFDSPGKAFLVIVGVVIIQQIESNVFSPQIMGRQLSVHPLT 315 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ + G +G+ + A+ VI + + I+ Sbjct: 316 IIFVLLVASQLAGFVGILLAVPAYAVSKVIVQHTYRLIR 354 >gi|254713835|ref|ZP_05175646.1| hypothetical protein BcetM6_10870 [Brucella ceti M644/93/1] gi|254717107|ref|ZP_05178918.1| hypothetical protein BcetM_11925 [Brucella ceti M13/05/1] gi|261218920|ref|ZP_05933201.1| permease [Brucella ceti M13/05/1] gi|261321581|ref|ZP_05960778.1| permease [Brucella ceti M644/93/1] gi|260924009|gb|EEX90577.1| permease [Brucella ceti M13/05/1] gi|261294271|gb|EEX97767.1| permease [Brucella ceti M644/93/1] Length = 382 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 126 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 186 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 246 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 306 SVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|17987522|ref|NP_540156.1| permease [Brucella melitensis bv. 1 str. 16M] gi|23501600|ref|NP_697727.1| permease [Brucella suis 1330] gi|161618683|ref|YP_001592570.1| hypothetical protein BCAN_A0726 [Brucella canis ATCC 23365] gi|163842985|ref|YP_001627389.1| hypothetical protein BSUIS_A0744 [Brucella suis ATCC 23445] gi|225852233|ref|YP_002732466.1| hypothetical protein BMEA_A0750 [Brucella melitensis ATCC 23457] gi|254693464|ref|ZP_05155292.1| hypothetical protein Babob3T_02119 [Brucella abortus bv. 3 str. Tulya] gi|254701494|ref|ZP_05163322.1| hypothetical protein Bsuib55_11631 [Brucella suis bv. 5 str. 513] gi|254704041|ref|ZP_05165869.1| hypothetical protein Bsuib36_08949 [Brucella suis bv. 3 str. 686] gi|254707057|ref|ZP_05168885.1| hypothetical protein BpinM_08751 [Brucella pinnipedialis M163/99/10] gi|254709833|ref|ZP_05171644.1| hypothetical protein BpinB_06086 [Brucella pinnipedialis B2/94] gi|256031323|ref|ZP_05444937.1| hypothetical protein BpinM2_11838 [Brucella pinnipedialis M292/94/1] gi|256044404|ref|ZP_05447308.1| hypothetical protein Bmelb1R_07888 [Brucella melitensis bv. 1 str. Rev.1] gi|256060836|ref|ZP_05450996.1| hypothetical protein Bneo5_10797 [Brucella neotomae 5K33] gi|256113247|ref|ZP_05454115.1| hypothetical protein Bmelb3E_11062 [Brucella melitensis bv. 3 str. Ether] gi|256159443|ref|ZP_05457215.1| hypothetical protein BcetM4_10813 [Brucella ceti M490/95/1] gi|260168461|ref|ZP_05755272.1| hypothetical protein BruF5_08853 [Brucella sp. F5/99] gi|261213720|ref|ZP_05928001.1| permease [Brucella abortus bv. 3 str. Tulya] gi|261314525|ref|ZP_05953722.1| permease [Brucella pinnipedialis M163/99/10] gi|261317372|ref|ZP_05956569.1| permease [Brucella pinnipedialis B2/94] gi|261324829|ref|ZP_05964026.1| permease [Brucella neotomae 5K33] gi|261752039|ref|ZP_05995748.1| permease [Brucella suis bv. 5 str. 513] gi|261754698|ref|ZP_05998407.1| permease [Brucella suis bv. 3 str. 686] gi|265988409|ref|ZP_06100966.1| permease [Brucella pinnipedialis M292/94/1] gi|265990824|ref|ZP_06103381.1| permease [Brucella melitensis bv. 1 str. Rev.1] gi|265994658|ref|ZP_06107215.1| permease [Brucella melitensis bv. 3 str. Ether] gi|265997875|ref|ZP_06110432.1| permease [Brucella ceti M490/95/1] gi|17983223|gb|AAL52420.1| permease [Brucella melitensis bv. 1 str. 16M] gi|23347515|gb|AAN29642.1| permease, putative [Brucella suis 1330] gi|161335494|gb|ABX61799.1| protein of unknown function [Brucella canis ATCC 23365] gi|163673708|gb|ABY37819.1| Hypothetical protein BSUIS_A0744 [Brucella suis ATCC 23445] gi|225640598|gb|ACO00512.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260915327|gb|EEX82188.1| permease [Brucella abortus bv. 3 str. Tulya] gi|261296595|gb|EEY00092.1| permease [Brucella pinnipedialis B2/94] gi|261300809|gb|EEY04306.1| permease [Brucella neotomae 5K33] gi|261303551|gb|EEY07048.1| permease [Brucella pinnipedialis M163/99/10] gi|261741792|gb|EEY29718.1| permease [Brucella suis bv. 5 str. 513] gi|261744451|gb|EEY32377.1| permease [Brucella suis bv. 3 str. 686] gi|262552343|gb|EEZ08333.1| permease [Brucella ceti M490/95/1] gi|262765771|gb|EEZ11560.1| permease [Brucella melitensis bv. 3 str. Ether] gi|263001608|gb|EEZ14183.1| permease [Brucella melitensis bv. 1 str. Rev.1] gi|264660606|gb|EEZ30867.1| permease [Brucella pinnipedialis M292/94/1] Length = 382 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 126 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 186 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 246 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 306 SVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|257438013|ref|ZP_05613768.1| putative permease [Faecalibacterium prausnitzii A2-165] gi|257199673|gb|EEU97957.1| putative permease [Faecalibacterium prausnitzii A2-165] Length = 398 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 112/327 (34%), Gaps = 13/327 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFLFYY 84 P I F S K I+ + + L ++ + + Sbjct: 37 PFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLTIILVAGVIILVMFG 96 Query: 85 GMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMW-ASELWTKHLSHPQSLKILSETFLK 142 + ++ + + ++ + IP + W+ + +L + P + L Sbjct: 97 VIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQFQPDQAIKWGISLLG 156 Query: 143 TNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + S G I + +S F LF + + + + + Sbjct: 157 NGVGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKEKLHLQVRKVIFAFIPKQKADA 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I + + + G + A+ G++ + +P + +G++ A A++P Sbjct: 217 ILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKMPYALLIGILIAFTALVPIFGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 AV +L+ N A + + I + P +VGG + LP + + G Sbjct: 277 FIGCAVGSFLIFMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSVGLPSIWVLAAVTIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 MG++G+ I L+++ I++E + Sbjct: 337 GNLMGIIGMLIFIPLVSVFYTIFREFV 363 >gi|229828723|ref|ZP_04454792.1| hypothetical protein GCWU000342_00789 [Shuttleworthia satelles DSM 14600] gi|229793317|gb|EEP29431.1| hypothetical protein GCWU000342_00789 [Shuttleworthia satelles DSM 14600] Length = 418 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 120/321 (37%), Gaps = 6/321 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEES------STFLAVIATVSVMCLFIVPLLFLFYYGM 86 PVL L+I + P+ + F K T T +++ + ++ +L + Sbjct: 48 PVLLGLVIAYVLHPLVNVFERKVFSRMKHFRPKTRHVFSVTATILVVLLLIVLLMIALIP 107 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +V + A + + + ++ + + +LS + T L + Sbjct: 108 QLIGSVVRFLQNAGDYIASLQKLIALAVDALRQNGRDVSNLSDMIKEGLDGLTNLLPSQP 167 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + G+ D+ + II I L R + Q + L + ++ Sbjct: 168 SQLLHFVTNIGVGVFDWVIGIIMAIYFLMDMERWMGGLRQLMGLLLSRQRYRELRDFAKR 227 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 +++ G + + + +P V L ++ + + P PI A+ Sbjct: 228 SDRILIRYIGGTILDGLIVAFANFIFMMIMQMPYAVLLSLVVGVTNLAPTFGPILGGAIG 287 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +L+ N ++A ++ I I ++P L G + + + ++ G + G++ Sbjct: 288 SLILLLINPWHALWFLIFTIILQTIDGYVIKPRLFGNTLGVAGIWILICIIVGGKAFGVI 347 Query: 327 GLFIGPVLMALIAVIWKESIM 347 G+ + A+ +++ESI+ Sbjct: 348 GILLAIPFAAISDFVYRESIL 368 >gi|296129870|ref|YP_003637120.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296021685|gb|ADG74921.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 398 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 108/329 (32%), Gaps = 13/329 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F V AL+ P+ + ++ + F+ L ++ Y + Sbjct: 71 FVAVFLALVFTAVLRPLVEVMSRVMP--RGLATAFSLLAGILFFLGMLTYVGYSIATQWN 128 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L ++ S +T + +++ + D Sbjct: 129 DLSTQFADGINQITDFLE---------SGSLPFTITSEQIAEWIDTALAWVQEHAGDLAG 179 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + A+ G + + + ++ I FF G + + A W+ Sbjct: 180 QAAASAGSVVVGFT-AVALAIFCSVFFLARGAQLWTWFLNQLPARTRATWQVAGGAGWYT 238 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 G IIA+ +G++ + VP L V+ I A IP GAP + I Sbjct: 239 FSGYTRGTVIIALVDGVLAFLLLSVLRVPLAAPLAVLVLIGAFIPLVGAPGAMIVAMIVA 298 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L +++A + + A+ + L+P ++G + L + + G T G+LG Sbjct: 299 LAANGLWSAVAVGVGIALIGQLEGHVLQPLIMGKQVSLHPVVVALAVTAGTLTAGILGAV 358 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 I L+A+ ++ +E Sbjct: 359 ISVPLVAVAWAVFSRLRTLDPPMEEDEDE 387 >gi|153933638|ref|YP_001384110.1| hypothetical protein CLB_1788 [Clostridium botulinum A str. ATCC 19397] gi|153935595|ref|YP_001387650.1| hypothetical protein CLC_1795 [Clostridium botulinum A str. Hall] gi|152929682|gb|ABS35182.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397] gi|152931509|gb|ABS37008.1| putative membrane protein [Clostridium botulinum A str. Hall] Length = 364 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 114/320 (35%), Gaps = 9/320 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + P+ F +K + F +I + V+ L I+ + + + Sbjct: 43 LVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFINTFVPKIIKNIG 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L I +W +D ++ ++ ++ L +N + Sbjct: 103 DLFVHSPDYINQTI---QWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI--SNLTNTFL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRI 206 + F + + +F +I + D S+ + L L + Sbjct: 158 NTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALSGEKNYSKILSFFKE 217 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V +G +I ++ GL+ + + VP + I I MIP P + Sbjct: 218 VDIVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGPFIGMIPA 277 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + N A + ++ I L P ++G + L + F + G T G++ Sbjct: 278 FIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIGGGTFGVM 337 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ ++A+I + + I Sbjct: 338 GMFLSVPIVAIIKIYLDKYI 357 >gi|148559405|ref|YP_001258693.1| putative permease [Brucella ovis ATCC 25840] gi|148370662|gb|ABQ60641.1| putative permease [Brucella ovis ATCC 25840] Length = 382 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 112/326 (34%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F+ D + Sbjct: 126 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 186 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLSFGLLIGF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I +++ + + + FI L+P LVG Sbjct: 246 FAGLISFIPYIGSFVGLALAIGVVLVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 306 SVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|323340244|ref|ZP_08080508.1| permease [Lactobacillus ruminis ATCC 25644] gi|323092435|gb|EFZ35043.1| permease [Lactobacillus ruminis ATCC 25644] Length = 379 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 112/299 (37%), Gaps = 8/299 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----STFLAVIATVSVMCLFIVPLLFL 81 F+ FAP+L A + + P+ + + K ++ T I + ++ + + L FL Sbjct: 40 FISTLFAPILIAGFLFYLLNPLVNLLMKIKVKNHHVSRTAAVAIVFLLLIAIIVSALSFL 99 Query: 82 FYYGMLEMKELVSKV---VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++++L+ + + + QH + ++P + ++ + ++ Sbjct: 100 IPNILNQVEQLIKNMPEYIRSFQHFLTKIFQQKNLPPWIVDLTKDVDINAYTKEIEESLS 159 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 F K N + I + ++I+ + LF+ +DG + + + Sbjct: 160 GFAK-NFMMSITSSIGSIIGMVTSVTVTIVTVPFMLFYMLKDGHKLVPTVTGVFSEKQAN 218 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + I G I + G Y + GVP + +G+ I MIP Sbjct: 219 RIGELLEKMSETISKYISGQAIECLFVGTCTAIGYGIVGVPFALLIGIFAGITNMIPYIG 278 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ L + ++ + + + I + P ++G + + L L+ Sbjct: 279 PYIGLLPALILAMSNSVKQTILVIIVCVVVQQIDGNLIYPNVIGKSLDIHPLTIIIILL 337 >gi|291437516|ref|ZP_06576906.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291340411|gb|EFE67367.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 455 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 106/319 (33%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V ++L+I P + + + + Sbjct: 81 LLVLAGTVWVLMRVISAVQLVVLAFAASLLITALLQPTVARLC-RIGVPRGPATALTALF 139 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L ++ + WL + P + ++ + Sbjct: 140 GFVVIGLIGWFVTWQVMENIDHLSDQIQDGIDE---LRNWLLNSPFHVTDKQINEIAKNL 196 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ +E + ++ I+ + + F DG I + Sbjct: 197 REAVGANTEQITSAGIEGV---------TVVVEALTGILLAVFSTLFLLYDGRRIWEWSL 247 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G + VP V L V Sbjct: 248 KLVPAAARPGVAGAGPAAWRTLTAYVRGTVVVALIDAIFIGLGIYFLDVPMAVPLAVFIF 307 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + + IP + A+++ + L+ +F + I L+PF++G +++ Sbjct: 308 LFSFIPLVGAVVSGALAVVVALVTQGVFTGVMTLVVVLAVQQIEGHILQPFILGRAVRVH 367 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 368 PLAVVLAVTTGGMVAGIGG 386 >gi|327484686|gb|AEA79093.1| Putative permease PerM [Vibrio cholerae LMA3894-4] Length = 354 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 121/349 (34%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T +I Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTLAVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQ---KFITSLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 126 HLEIVESVIGNAKNKVLGMGESVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGILPR-NRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +WK +E Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEP 352 >gi|304383623|ref|ZP_07366082.1| membrane protein [Prevotella marshii DSM 16973] gi|304335147|gb|EFM01418.1| membrane protein [Prevotella marshii DSM 16973] Length = 365 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 136/355 (38%), Gaps = 27/355 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEES-STFLAV 64 +RW ++ +++V++ ++ + + P A ++ + +PI K V Sbjct: 10 RFIRWALIALLVVTVLYIVSYLSNVLLPFFVAWLLAYLLYPIVRFVQYKLHVRVRALAIV 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEM---KELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ V+V+ L L F+ + ++ ++ + + H V W+ Sbjct: 70 LSMVAVLGLIGGVLYFIIPPMIEQLDRLTDVAGRYLKDTTHSNSVTAWIQQ--------- 120 Query: 122 LWTKHLSHPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + H + S+ F + + + + I + S I ++ +FF Sbjct: 121 -WLQDNRHEITRFFHSKDFSDIVKTTMPRLFAVLGQTASIVMSIVASFITLLY-MFFILL 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D +++ + +WK++ V + + + G +++++ G++ + L P Sbjct: 179 DYETLTNNWIKIFPQKNRPFWKELMHDVERELNNYIRGQSLVSLIMGILFCIGFTLIDFP 238 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCL--FLWGAIELFIVD 293 + LG++ ++ ++P ++ +I L+ G F + L I I D Sbjct: 239 MGIGLGILIGLLNLVPYLHTLALVPTAILALLKAAETGENFWWVFVPALLVFLIVQLISD 298 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P ++G ++L L +G +GL I L LI W+ + Sbjct: 299 LVVTPRIMGKAMRLNPAILLLSLSVWGALLGFVGLIIALPLTTLIIAYWQRYVTK 353 >gi|283796073|ref|ZP_06345226.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] gi|291076286|gb|EFE13650.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] Length = 376 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 128/366 (34%), Gaps = 13/366 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 E I+ ++ IIL++ + L AP + +I + + Sbjct: 2 EIQKRKNFIINFLYFTIILLAAFILIKYGLPMVAPFAAGFVIAYLLRTPVCFLSKRLRMK 61 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 AV+ + C + + + +K + + + V LSDI G+ Sbjct: 62 KKAAAVLTVLVFYCTVGLLIFLMSVKAFSAVKGFLFNLPAL--YAAHVEPILSDIYSGIE 119 Query: 119 ASEL-----WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 S L L + S + ++ + S +S++ +II+ Sbjct: 120 QSFLHMDPALLTALEELMTQFSQSLGQMVSSLSRLAMGYVSGVASSLPGIFISLLLLIIS 179 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF D ++ + + I V + +I L L Sbjct: 180 TFFISADYDRLTGFCLLQLDEKRREIFLLIKEYVVGTLFVCIRSYALIMSITFLELSIGL 239 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GV + + + + AI ++P G + +K N A L L + + +V Sbjct: 240 TVVGVENSIFIAFLIAIFDILPVLGTGGVMIPWIVLEALKMNFSMALALLLVY-LFVTVV 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P +VG I L + T + G + G+LGLF P+ ++L+ + + ++ + Sbjct: 299 RNIIEPKIVGAQIGLHPVVTLSSMFVGAQLFGVLGLFGFPICLSLLRYLNENGVIRLFRM 358 Query: 353 KEKISS 358 +E +S Sbjct: 359 EENTNS 364 >gi|254485468|ref|ZP_05098673.1| membrane protein [Roseobacter sp. GAI101] gi|214042337|gb|EEB82975.1| membrane protein [Roseobacter sp. GAI101] Length = 358 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 114/339 (33%), Gaps = 14/339 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + LV L+F P L I + P+ S S ++ T+ + +F++ Sbjct: 16 AAVFLVILWFTGNVLLPFLIGAAIAYFLDPVADRLES-LGLSRAMATMVITLIAILIFVL 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + L + + + R P L++ + Sbjct: 75 MALLVIPALVTQSVSLFNVAPKLADNFMAFLR--DHFPTLFVEGSTLNTSLTNIAATVQE 132 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + A L+ L + + + + D + ++DSL Sbjct: 133 RGGEL--------LQTALASAASLLNIMLLFVIVPVVAVYLLLDWDRMVAEIDSLLPREH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++R + + + GM + + G A L G+ + +G I ++ IP Sbjct: 185 APVIRRLAREIDRTLAGFVRGMGTVCLILGTYYAIALMLVGLQFGLVVGFIAGLVTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + ++I L + G+ + + + + L P LVG + L + Sbjct: 245 LGALLGGILAIGLALFQFWGDWLSIGLVAGVFFLGQTLEGNFLTPKLVGNSVGLHPVWLI 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +G+ + A + VI + + +E+ Sbjct: 305 LALSVFGSLFGFVGMLAAVPIAATLGVIARFAAEQYRES 343 >gi|295090070|emb|CBK76177.1| sporulation integral membrane protein YtvI [Clostridium cf. saccharolyticum K10] Length = 379 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 117/334 (35%), Gaps = 8/334 (2%) Query: 16 IMFIILVSLY--FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I LV + L GFF P + +I + P+ + + + V V+ L Sbjct: 18 LTGIYLVCFWGPKLLGFFIPFVIGWVIALIANPLVRFLERRMRIVRKHGSALIIVGVLAL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+ L + E+++ + + ++ R + GG L + Sbjct: 78 IILLLYLVIGKLYTEIRDFIGDLPALYENAALEIRGALE-NGGRLFEFLPDEFQETVVRF 136 Query: 134 KILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ A + ++ + I++ + F + I + L Sbjct: 137 TENLGSYMGEIVSKAAAPTVEIAGNVAKGIPNALVNTVITILSAYIFIAEQERIMEWLRK 196 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + Y + + VI FL I ++L + V + L V+ +I Sbjct: 197 ILPEFILRYIAYLKKDARGVIGGYFLAQFRIMFVVAVILAVGFLFLDVSYGLVLAVLISI 256 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G + + L G+ A L + + + + ++P +VG + LP Sbjct: 257 LDFLPVFGTGTALFPWAAVKLFTGDYGYAAGLLILY-VVTQVARQLIQPKIVGDSMGLPP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L T F L G + GL G+ + + + +K Sbjct: 316 LMTLFLLYLGFKMKGLAGMILAVPIGLIFINFYK 349 >gi|312622433|ref|YP_004024046.1| hypothetical protein Calkro_1371 [Caldicellulosiruptor kronotskyensis 2002] gi|312202900|gb|ADQ46227.1| protein of unknown function UPF0118 [Caldicellulosiruptor kronotskyensis 2002] Length = 351 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 126/359 (35%), Gaps = 16/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISK 54 M L + + + +I + +YF P L AL + + P +K Sbjct: 1 MHIIKLVKRYFTDILFIALIAIVIYFFANMKAFWPILIPFLIALFLSYLLKPCVDFLETK 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +I+ + + I+ ++ + E K+L+ + I + +W +I Sbjct: 61 IRSRD-ISILISFAIIFGITIMVFVYFIPLFVSETKQLIQNIPDYI---ILIQKWFFEI- 115 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++L + I E K F+ L + + I Sbjct: 116 DSKLLNKLNIDIKEILNANSINIEGISKQTLSIFL-----NIVKSISSNILYYLLIPIIS 170 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ RD + + L + I + +V+ G + A GL+ + Sbjct: 171 FYILRDWKRLVMWIKWLLPEKYRKEGLYIFVDINRVLHQYIRGQLLDAFIVGLLSFVGFS 230 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L V LGVIT I +IP PI + ++ + + + A + ++ + + Sbjct: 231 LLSVRYAALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSF 290 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 291 IISPRVIGSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|254473425|ref|ZP_05086822.1| permease [Pseudovibrio sp. JE062] gi|211957541|gb|EEA92744.1| permease [Pseudovibrio sp. JE062] Length = 363 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 119/339 (35%), Gaps = 9/339 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N Q + + ++ L +G P ++ + + + PI + A + Sbjct: 3 VNKQLFFWLLSLAAFILFLTVFQGILLPFVAGMALAYLLDPIADYLETHGFGR--IWATV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + V L + K+L++ + + + L + G + Sbjct: 61 TILLIFLIVFV--AALLILLPILGKQLIAFLDYLPELAANLETLLRE--GLGPQLDRLAN 116 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q + + N + + G + + + F+ D ++ Sbjct: 117 LSGQGQKIDWGAFVGQAANFVGGLLSSIWSGGQALISIIGLAVVTPVVAFYLLLDWDNMI 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++DS + + ++R + V+ G ++ + G + G+ + +G Sbjct: 177 ERIDSWLPRDYQQTIRTLARDMDSVVAGFVRGQVLMCLILGTFYAVGLLIVGLKFGLLIG 236 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I +SI + + + F + + F+ L+P L+G Sbjct: 237 LTAGLISFIPYVGAIVGFGLSIGVALVQFWPDPFMIGAVLAVFVVGQFLEGNVLQPKLLG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + L + F L MG +G+ I A++ V+ Sbjct: 297 GSVGLHPVWLMFALFAFGSLMGFVGMLIAIPAAAVVGVL 335 >gi|220906628|ref|YP_002481939.1| hypothetical protein Cyan7425_1198 [Cyanothece sp. PCC 7425] gi|219863239|gb|ACL43578.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 390 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 123/315 (39%), Gaps = 11/315 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMC 72 I+ + ++ + +F + + LI+ + + +I ++ + ++I + + Sbjct: 28 ILVLNFWAMTSISRYFGALFAVLIVASLLAFLLNYPVSWIERQGGKRSQASIIVFLLAIS 87 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + L + ++L +++ + G LS L + Sbjct: 88 ILLGLGVTLVPMAFAQAQQLTARLPEWVESGRQQLLVLSH---KADEMGLPIDLDALGLQ 144 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + L+ + A LD ++++ I+ F+ + G + L Sbjct: 145 LLDRLKEQLQAVARGVL-NLAVDTVSSLLDVLINVVLTIVLTFYLLQHGDELWSSLIQW- 202 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L P + S+ + ++ F+G I++ L S + L VP + G+ +MA Sbjct: 203 --LPPKVQEPFSQTLRLSFQNYFIGQLILSTCMAAGLISTFLLLKVPFGLLFGLTIGLMA 260 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P G + +++ + ++ +++ + I I++ + P ++G L + Sbjct: 261 LVPFGGTVGIITITLLVTLQ-DVWLGLRVLGASVIVQQILENLIAPRIIGSVTGLNPVWV 319 Query: 313 FFGLVGGVRTMGLLG 327 F ++ G + GLLG Sbjct: 320 FLSILAGAKIGGLLG 334 >gi|16761411|ref|NP_457028.1| hypothetical protein STY2734 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765813|ref|NP_461428.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140892|ref|NP_804234.1| hypothetical protein t0364 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62181060|ref|YP_217477.1| PerM family permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167549489|ref|ZP_02343248.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|197249699|ref|YP_002147446.1| permease PerM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205353598|ref|YP_002227399.1| hypothetical protein SG2525 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857906|ref|YP_002244557.1| hypothetical protein SEN2474 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213160892|ref|ZP_03346602.1| hypothetical protein Salmoneentericaenterica_12908 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|224582973|ref|YP_002636771.1| hypothetical protein SPC_1164 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913632|ref|ZP_04657469.1| hypothetical protein SentesTe_21218 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829337|ref|ZP_06546949.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25307066|pir||AC0818 probable membrane protein STY2734 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421035|gb|AAL21387.1| putative PerM family permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503711|emb|CAD02695.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136517|gb|AAO68083.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62128693|gb|AAX66396.1| putative PerM family permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197213402|gb|ACH50799.1| permease PerM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205273379|emb|CAR38351.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205325154|gb|EDZ12993.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|206709709|emb|CAR34059.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467500|gb|ACN45330.1| hypothetical protein SPC_1164 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267994604|gb|ACY89489.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159045|emb|CBW18558.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913481|dbj|BAJ37455.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086987|emb|CBY96757.1| putative permease perM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222805|gb|EFX47876.1| Putative permease PerM [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613768|gb|EFY10707.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619489|gb|EFY16365.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624994|gb|EFY21823.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629563|gb|EFY26339.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634007|gb|EFY30744.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635555|gb|EFY32266.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639897|gb|EFY36573.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644391|gb|EFY40932.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649155|gb|EFY45595.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655245|gb|EFY51554.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658292|gb|EFY54558.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664292|gb|EFY60489.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669460|gb|EFY65609.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673187|gb|EFY69293.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676578|gb|EFY72646.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683329|gb|EFY79343.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685785|gb|EFY81778.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715543|gb|EFZ07114.1| Putative permease perM [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130823|gb|ADX18253.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192538|gb|EFZ77767.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199583|gb|EFZ84674.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323208089|gb|EFZ93034.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210188|gb|EFZ95089.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217054|gb|EGA01776.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220607|gb|EGA05056.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225473|gb|EGA09704.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229257|gb|EGA13381.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235428|gb|EGA19512.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237386|gb|EGA21449.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245141|gb|EGA29142.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323253131|gb|EGA36963.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258707|gb|EGA42368.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260612|gb|EGA44222.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266388|gb|EGA49876.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269781|gb|EGA53231.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624317|gb|EGE30662.1| permease PerM [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628695|gb|EGE35038.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 355 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|239929181|ref|ZP_04686134.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 452 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 106/319 (33%), Gaps = 21/319 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +++ L + V ++L+I P + + + + Sbjct: 78 LLVLAGTVWVLMRVISAVQLVVLAFAASLLITALLQPTVARLC-RIGVPRGPATALTALF 136 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L ++ + WL + P + ++ + Sbjct: 137 GFVVIGLIGWFVTWQVMENIDHLSDQIQDGIDE---LRNWLLNSPFHVTDKQINEIAKNL 193 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ +E + ++ I+ + + F DG I + Sbjct: 194 REAVGANTEQITSAGIEGV---------TVVVEALTGILLAVFSTLFLLYDGRRIWEWSL 244 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G + VP V L V Sbjct: 245 KLVPAAARPGVAGAGPAAWRTLTAYVRGTVVVALIDAIFIGLGIYFLDVPMAVPLAVFIF 304 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + + IP + A+++ + L+ +F + I L+PF++G +++ Sbjct: 305 LFSFIPLVGAVVSGALAVVVALVTQGVFTGVMTLVVVLAVQQIEGHILQPFILGRAVRVH 364 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 365 PLAVVLAVTTGGMVAGIGG 383 >gi|326443144|ref|ZP_08217878.1| putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 444 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 104/308 (33%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ +L+ L + V SAL+I P + + + + ++ Sbjct: 79 LLVLAGTLWVLMRVISAVQLVVLAFASALLITALLQPTVARLL-RIGLPRGLATAVTAIA 137 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + L +V Q + W + P + ++ + Sbjct: 138 GFAVMALVGWFVVWQVMENLDTLSDRVREGIQE---LRLWALEGPFHVSEGQINDLADNL 194 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ +E I + +++ + + + F DG I Q Sbjct: 195 SDTIGSNTEE---------ITSAGLQGVTALMEFLAGALLAMFSTLFLLHDGPRIWQWTL 245 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + G ++A+ + + +G W VP V L V Sbjct: 246 KLVPAQARPGVASAGPRAWATLTAYVRGTVLVALIDAIFIGLGIWFLDVPMAVPLAVFVF 305 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P GA +S + L+ +F A + + I L+PF++G +++ Sbjct: 306 LFAFVPLVGAVLSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHVLQPFILGRAVRVH 365 Query: 309 FLPTFFGL 316 L + Sbjct: 366 PLAVVLSV 373 >gi|224541834|ref|ZP_03682373.1| hypothetical protein CATMIT_01006 [Catenibacterium mitsuokai DSM 15897] gi|224525257|gb|EEF94362.1| hypothetical protein CATMIT_01006 [Catenibacterium mitsuokai DSM 15897] Length = 391 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 122/349 (34%), Gaps = 24/349 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSS----------FISKKEESSTFLAVIATVSVMCLFI 75 FL F P+L +I + P+ F KK+ S I ++ V+ +F Sbjct: 47 FLTQVFTPLLIGFVIAYLLKPLVEKVESSLRSISYFQEKKKLSHQLSVAITSLIVLFVFA 106 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ E+ V + R ++ E L + Sbjct: 107 LLSAFVIRSIGKEL------AVTQFKDMSDFLRIIAK--NVNAFYEDLIVQLKSMSISTV 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ----LDSL 191 + FLKT + D+ +++F II +F DG + + + Sbjct: 159 QLQQFLKTFANGLTTNILGAISRVS-DFFTNLLFSIIFAIYFMLDGEKLWNYWSKSIKAF 217 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + V G I A L++ A+ + + + ++ I Sbjct: 218 TSRQVDVVIHQLLVDIEGVFSGYVRGQVIDAFLMFLMVSIAFGFLHIKFWIVIALLVGIG 277 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P G + + +++I L+ G++ A F+ I + + P L+ I + + Sbjct: 278 NLVPYVGPFLGYGSIAIIGLVTGDLHMALKAFIALLIIQGVDGNIINPRLLSASIDIHPV 337 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G G LG+ + + AL + ++ + ++K ++ Sbjct: 338 LVIVSLIIGSMIGGFLGMLVSVPVGALCKIWFERLVDYRTQSKNELVEE 386 >gi|37526639|ref|NP_929983.1| putative permease PerM [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786071|emb|CAE15123.1| Putative permease perM [Photorhabdus luminescens subsp. laumondii TTO1] Length = 359 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 124/353 (35%), Gaps = 18/353 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I ++I+ +YFL G P+L A+++ + WP + K S T Sbjct: 10 RRRFTDPQVIALFVILLAGFCIIYFLHGILTPLLVAIVLAYLLEWPTAK--LEKLGCSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + ++ +L + + L+S + P L+ Sbjct: 68 VAVCIVLIIFSSISLLVILIVAPTVWQQGINLLSDI----------PNMLNRFNEYAQTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + + + +F+ + L + +I + + FF Sbjct: 118 PARYPALVDAGIIDMMAENLRSKISIAGESVVKFSVASLIGLLTLAIYLILVPLMAFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + Q L + ++ R + + I + G + G+ + + G+ Sbjct: 178 KDKNQMLQALQRVLPR-NRILAGQVWREMNQQITNYIRGKVTEMVIVGICTYAVFAFLGL 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ + +IP GA I V + L + + L + + + L Sbjct: 237 DYSLLLSVLVGLSVLIPYVGALIVTIPVVLVALFQWGVGTDFWTLIIAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P L + L L ++ G G+F L LI + + I Sbjct: 297 VPILFSEAVNLHPLVIILSVITFGGLWGFWGVFFAIPLATLIKAVIQAWPEEI 349 >gi|313675596|ref|YP_004053592.1| hypothetical protein Ftrac_1494 [Marivirga tractuosa DSM 4126] gi|312942294|gb|ADR21484.1| protein of unknown function UPF0118 [Marivirga tractuosa DSM 4126] Length = 368 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 118/340 (34%), Gaps = 15/340 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +++ L K P+ AL++ F +P++ F + A + Sbjct: 6 QNSFFTLAFVAVLIAFLVIAKSILIPLGIALLLAFILYPVHKKFSQWGVGN-ILAAFFSI 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + F + E+ + ++ V +++ + Sbjct: 65 LLLIIIIGGGITFFSAEIIALSDEISNFGEKLSKLYTDVIIFVNQ--------NVSLVED 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L +++LK + + ++ +I M I +F F + + Sbjct: 117 LNKDQLLNDLKSWLKDSAGSLLGGT----FNSTANFFTGLITMFIYMFLFLIYHKGLVRA 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + K+ + V +V + GM ++ + G W+ G+ S G + Sbjct: 173 FMKFSPEDKKQEFFKMLKGVQQVGQKYLSGMLVLIVILGFANSIGLWIIGIDSPFLFGFL 232 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A +++IP G + T +Y + + + + + I L P +VG + Sbjct: 233 AASLSIIPYIGTTLGATIPVLYAFMSHDSLLVPLAVAILFWAVQLIESNFLSPKVVGNSV 292 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L+ G G+ G+ + A++ V+ +E Sbjct: 293 NVNAFAAILSLIVGASIWGVAGMVLFLPFAAMLKVVCEEY 332 >gi|58697572|ref|ZP_00372799.1| hypothetical protein WwSim0537 [Wolbachia endosymbiont of Drosophila simulans] gi|58535933|gb|EAL59683.1| hypothetical protein WwSim0537 [Wolbachia endosymbiont of Drosophila simulans] Length = 333 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 122/334 (36%), Gaps = 13/334 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-----TFLAVI 65 I I+ I+ L+ ++ P L +++I + P+ F + S L ++ Sbjct: 6 ITICFILLFIIGMLFLMRPMIFPCLISVVIAYLFNPLVVKFEKYRIPRSCSVIFIILILL 65 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ F++P++++ +L LVSKV IP +I + +K Sbjct: 66 IAFILVITFVLPIIYVQITSILNF--LVSKVPSLKLKVIPSVLEFLNIKIEDSLFDHLSK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L+ S + N +D F + + ++ + F+ RD I Sbjct: 124 NLAENYSNYVS----YFMNALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRDWPLII 179 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ L + V +I + G + I + + + G+ + +G Sbjct: 180 EKASKLIPIPYRGKIADYFSKVDFIISNYLKGQVNVCIVMMVFYSVSLSIIGLEHSIVIG 239 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ ++ IP P+ +T + I F + + L + I L P L+G Sbjct: 240 ILSGMLTFIPYVGPLLYTIIGFLSAITQFSGWFESAAVLLLFGVGQLIDSNILVPLLIGK 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + G+ G G+ + ++A+ Sbjct: 300 KVHIHPTVIILGITICASYFGFTGILLFIPIIAM 333 >gi|302389809|ref|YP_003825630.1| sporulation integral membrane protein YtvI [Thermosediminibacter oceani DSM 16646] gi|302200437|gb|ADL08007.1| sporulation integral membrane protein YtvI [Thermosediminibacter oceani DSM 16646] Length = 352 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 127/328 (38%), Gaps = 4/328 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + ++ + + + + P ++I PI + K + S + ++ ++ Sbjct: 15 LAIAVVSIVIAIVLKYLLPFAVGMLIALMIDPIVNRIELKLKISRGIVVILVLSAIFSAL 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ E+ +L++ + + + ++ + L + Sbjct: 75 GYLIILAISRLTFELGKLINILPSYTDFLSAILSDIGSFMFSIY-DIIPKTVLDYLLKNW 133 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++L +F + G + + + +IF ++ +FF +D I + + H Sbjct: 134 GQIISYLTGFLSNFYTFLVEKLG-LIPNILVFLIFTFLSSYFFAKDKKRIMISIRKILPH 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + I + + + L+ + +++ V + LG+I ++ ++ Sbjct: 193 NFYKKLENIQLELLISFVGLIKAQITLVMISTLITIAGFYILKVDYALTLGIICGVLDVL 252 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G I F +++ I GNI A L + + + L+ ++G + L + Sbjct: 253 PIFGPSIIFIPWAVFSAIVGNIKFAIALIALYLVVVG-CRQVLQAKVIGTHLGLDPIVAL 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G++ G LGLFIGP+++ ++ + Sbjct: 312 ISIYVGIKIFGFLGLFIGPLVVVIVRAV 339 >gi|75908944|ref|YP_323240.1| hypothetical protein Ava_2732 [Anabaena variabilis ATCC 29413] gi|75702669|gb|ABA22345.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 345 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 127/349 (36%), Gaps = 21/349 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVL----SALIIGFTSWPIYSSFISKKEESSTF 61 LN ++R++++ ++ L +F V+ A I+ F Sbjct: 13 LNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQWLRRFLPH--NI 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+ + + + L+ + + + ++L+ + +P + + Sbjct: 71 AVVVIFLISIVILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVEGL-------- 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + Q + + L+T + + + FL ++ I + + FF DG Sbjct: 123 ---LRNRNLQIDLSVIQEQLRTQAVSTLVTSLA-IVQQFLTNFVTFILIAVVAFFMLLDG 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I+ + F G ++ + + L VP Sbjct: 179 EKLWNFTLKIIPQ---KRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFA 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L VI I+ +IPG +++ +++ A + + + I D + P ++ Sbjct: 236 LILSVIVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPRIM 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G + L + FF L+ G R GLLG+FI + +I +++ M + Sbjct: 296 QGALNLNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEIDEMKSE 344 >gi|23010964|ref|ZP_00051477.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 377 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 112/324 (34%), Gaps = 14/324 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ET + + I+ I+ +++ LY L+ P ++ L + + P+ Sbjct: 10 DETSMRGRAIIGLSILAVLIFLLYELREVMLPFVAGLALAYLLDPLADRLERLGLGR--- 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + AT+ ++ F+V + L + ++ +V A + + + G Sbjct: 67 --LAATLLILAGFVVGFVVLLIIVVPLAASQIASLVNALPAMVARLQSILVERAGPLLQR 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYR 179 + + + L+ T + G F+ S + + ++ + F+ Sbjct: 125 VGGAEVVN--ELQSSVGTLVGQGGTWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLH 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + LD ++++ + + G +++ + G +L G+ Sbjct: 183 DWDRMIATLDGWVPPRHRPTVRRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLN 242 Query: 240 SHVALGVITAIMAMIPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V +G+I+ + IP G +S + G+ + + F+ Sbjct: 243 FGVLIGLISGFLTFIPYVGTLTGFMLSIGVALVQWWPSGDWLHIGLTLGVFLVGQFLEGN 302 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVG 318 + P LVG + L + F L+ Sbjct: 303 VVSPKLVGDSVGLHPVWLMFALLA 326 >gi|283458312|ref|YP_003362931.1| putative permease [Rothia mucilaginosa DY-18] gi|283134346|dbj|BAI65111.1| predicted permease [Rothia mucilaginosa DY-18] Length = 428 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 104/339 (30%), Gaps = 11/339 (3%) Query: 17 MFIILVSLYFLKGFFAPVLS---ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + L + Y A V A+ I PI S + Sbjct: 97 VGLALFAYYIFNNVGALVGWVTGAIFIALGLDPIVRRLESW-GIKRGIGVIAVLAGFAGA 155 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + V Q+ I W ++ S ++ + Sbjct: 156 VTGLVMTIGPIISEQASKFVQYAPGIYQNTIDS-DWYHELDQRFNISTWVNEN------V 208 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 E+ ++ ++ G +I ++ +F +I L Sbjct: 209 PKFLESTFSSSQVNSFMSSLVSAGSTLAQSVTGVIIVLFLSLYFLTSMDTIKAWGVRLAP 268 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K I+ + + + + +G ++A+ V G + ++ I+A Sbjct: 269 ASKRVRVKYITDKITESVGNYVMGQALVAVLNAFVAFLIMAFLGFSFPQLMALVVMILAF 328 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP + ++ +L+ A + + L + + P ++ + +P Sbjct: 329 IPLVGGVIALILTSLILLTQGWSLALWFAVAYFLYLQVEAYLISPRIMARAVSVPAGVAI 388 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G G+LG I + A + ++ +E + ++ Sbjct: 389 ISVAAGGALWGVLGALIAIPVAASMLILVREVFIPRQDQ 427 >gi|111025354|ref|YP_707774.1| hypothetical protein RHA1_ro08572 [Rhodococcus jostii RHA1] gi|110824333|gb|ABG99616.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 395 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 94/279 (33%), Gaps = 8/279 (2%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V +F V L F + + + LV++ Q P +L+ + Sbjct: 118 LAVTVVFTVALAFTAGFFAVAIPPLVTQ---TEQLIDRAPDYLNQLQDHSSMVGKLNDRY 174 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L I G D + + + +F + +I Sbjct: 175 HLQDRLTSAV-----NGSGQTIVNETVSAGAAIFDALGKFLILAVLTVYFLANLPAIRTT 229 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L H I + + + LG +I++ G VP + LGV Sbjct: 230 GYRLIPHSRRPRAILIGDQIFAKVGAYVLGNVLISVIAGTATAIWLLAFNVPYALFLGVF 289 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+ ++P V + + ++ ++ D L P ++G +K+ Sbjct: 290 VALFDLVPVVGSTIAGIVVAAVALTVSLPVCIATVIFFVAFRLAEDYLLVPRIIGRTVKI 349 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P L T ++ G +G++G + + A I ++ +E++ Sbjct: 350 PALTTVVAVLIGGTLLGIVGALVAIPIAAAIHLLVEETV 388 >gi|288926027|ref|ZP_06419956.1| membrane protein [Prevotella buccae D17] gi|288337247|gb|EFC75604.1| membrane protein [Prevotella buccae D17] Length = 387 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 136/370 (36%), Gaps = 17/370 (4%) Query: 1 MRETMLNPQGIMRWM-IMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW+ I +IL LY L G P A + + +PI + Sbjct: 1 MNEQKITFDKLVRWVGIGALILAVLYLVNYLSGALLPFFIAWLFAYLLYPIVKFIQYRLH 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 LA+I T+ ++ I +++L M+E E + +V H Sbjct: 61 VKVRALAIIVTMILVIAVIAGVIYLIIPPMIEQFEKLGEVTTKWLHTTTHTNN-----LT 115 Query: 117 MWASELWTKHLSHPQSLKILSE-TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + E + S + + + + + F + + + S+I ++ +F Sbjct: 116 TYIQEWLQANQSEIEKFFKSRDFSDAIKTAMPRLFSFVGQTASVVMSIIASMITLLY-MF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++Q + +W ++ + V + + + G ++A+ G++ + + Sbjct: 175 FILLDYEHLTQNWIRIFPQKNRPFWHELMQDVERELNNYIRGQGLVALCMGIMFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G P + LG++ I+ ++P + + ++K +++G + + Sbjct: 235 IGFPMAIGLGILIGILDLVPYLHTFALIPTAFLAMLKAADTGQNFWWVFGLAVIVFIVVQ 294 Query: 293 ---DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 D P ++G + L L +G +GL I L LI W+ + Sbjct: 295 IITDFITTPKIMGKAMGLNPAILLLSLSVWGTLLGFIGLIIALPLTTLIIAYWQRYVTKE 354 Query: 350 KENKEKISSN 359 K SN Sbjct: 355 HAPKRSSISN 364 >gi|269795407|ref|YP_003314862.1| putative permease [Sanguibacter keddieii DSM 10542] gi|269097592|gb|ACZ22028.1| predicted permease [Sanguibacter keddieii DSM 10542] Length = 436 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 109/336 (32%), Gaps = 18/336 (5%) Query: 15 MIMFIILVSLYFLKG-----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+ I + L F + AL+ P+ + + +A +S Sbjct: 34 LIIVTIAIGLVVFATSRVQLVFIALFVALVFSAVLRPVVNIYAKVMP--RALATALALLS 91 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L ++ + ++L + +P + ++ Sbjct: 92 GILVIGGLLAYVVASVAGQWQKLSDQFESGTNQIFEFLEN-GPLPFSITVDDMRGWFDDG 150 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q ++ + I A + ++ FF G S+ Sbjct: 151 LQWVQDHAGD---------IAGTAFEQAGTVFEIFTALALAFFCTIFFLARGDSMWSWFL 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + WK + G IIA+ +G++ G + GVP L V+ Sbjct: 202 NQLPSRLRDTWKVVGGAGWYTFSGYTRGTVIIAVTDGILAGIFLTILGVPLAAPLAVLVL 261 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A IP GAP + + L I+ A + + A+ L+P ++G + L Sbjct: 262 IGAFIPLIGAPAAMVIAMVVALAADGIWKAALVGVGIALIGQFEGHVLQPLVMGRQVSLH 321 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G G+LG I L+A+ ++ + Sbjct: 322 PVVVAISVTAGTLLSGILGAVIAVPLVAVAWAVYSQ 357 >gi|294631156|ref|ZP_06709716.1| permease [Streptomyces sp. e14] gi|292834489|gb|EFF92838.1| permease [Streptomyces sp. e14] Length = 459 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 105/307 (34%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ +++ L + V + A + + +++ + + Sbjct: 78 LLVLAGTVWVLMRVISAVQLVVLAFVAALLITALMQPTVARLRRHGLPRGPATALTAILG 137 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + L +++ + +WL + P + ++ S Sbjct: 138 FVIMGLIGWFVTWQVMENIDNLSNQIQDGIDE---LRKWLLNSPFHVTDKQINQIAKSLR 194 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ ++ + ++ I+ I + F DG I + Sbjct: 195 EAIGANTDQITSAGLEGV---------TVVVEALTGILLTIFSTLFLLYDGRRIWEWTLK 245 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + G I+A+ + + +G + VP V L V + Sbjct: 246 LVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLNVPMAVPLAVFIFL 305 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 306 FAFIPLVGAVVSGALAVVVALVTQGVFTAVMVLVVVLAVQQIEGHVLQPFILGRAVRVHP 365 Query: 310 LPTFFGL 316 L + Sbjct: 366 LAVVLSV 372 >gi|194446794|ref|YP_002041754.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405457|gb|ACF65679.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 355 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|261866811|ref|YP_003254733.1| PerM [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412143|gb|ACX81514.1| PerM [Aggregatibacter actinomycetemcomitans D11S-1] Length = 353 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 117/347 (33%), Gaps = 13/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + + I+F V++YF AP+L A+++ + WP+ K + Sbjct: 10 RRRFSDPQAMGLFAILFFGFVAIYFFSDLIAPLLVAIVLAYLLEWPV-RLLNEKLKCPRL 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + S L + +L L +M L+S + WL +P Sbjct: 69 LATGLVIGSFTGLVFLVVLVLIPNLWTQMVNLLSDLPHMFNR---FNEWLLSLPVRYPDM 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S ++K ++ + + + + + ++ FF +D Sbjct: 126 IDAQTVESIFGTVKEKILGLGESALKLSLASIMNLVTLGIYAFLVPLMV-----FFLLKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + K+ + + I + G + + +V + + + G+ Sbjct: 181 KRQLMDGVSRFLPR-NRTLASKVWVEMQQQIANYIRGKLVEILVVTIVTYAIFLIFGLNY 239 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRP 298 + L V + ++P GA + V + + + G+ + + + + L P Sbjct: 240 PLLLAVAVGLSVLVPYIGAVLVTIPVVLVAIFQFGDTHTFWYIVIAFVVSQLLDGNLLVP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 FL + L L ++ G G+F L L+ + Sbjct: 300 FLFSEAVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 346 >gi|89069901|ref|ZP_01157235.1| hypothetical protein OG2516_06352 [Oceanicola granulosus HTCC2516] gi|89044577|gb|EAR50696.1| hypothetical protein OG2516_06352 [Oceanicola granulosus HTCC2516] Length = 380 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 116/328 (35%), Gaps = 16/328 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ M + ++ ++L K PV AL I P+ S + + ++A + Sbjct: 12 NSLLALMAVILVGLALQVTKPVMVPVTLALFIALVVSPVEDRIASLFPRNVRWPGLLAAM 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V+ + + + G + +S V I G +L Sbjct: 72 AVILAVFATFISVIWIGARRIGGALSGVPGRINQYIREANLEERTMFGADIEQL------ 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + GI F A+R L++ + + + +++L Sbjct: 126 ---------ASMVSDRGIAFASGLATRVLNSASTMVLTLALTVFLVLLMLTEAPRAAKKL 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +++ E + WK R++ + +R + + + + W VP + G++ Sbjct: 177 EAVSEAEETSRWKNAIRVIARKLRLYLMARAALGALTAVCYVAWLWFNDVPLLLVWGLLV 236 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + +P G+ +S Y L+ G N + + + ++ + P + GG + L Sbjct: 237 FLFSFVPNLGSVLSGLLPVSYALLTGEGGNIWLIIVGLLVIEQVIGNFVDPHVQGGQVSL 296 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L ++ G LG +G +M Sbjct: 297 SPLVILLSVIFWGWLWGPLGALLGVPVM 324 >gi|127512771|ref|YP_001093968.1| hypothetical protein Shew_1843 [Shewanella loihica PV-4] gi|126638066|gb|ABO23709.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 366 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 103/305 (33%), Gaps = 11/305 (3%) Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +T +++ + V + ++ + + + + ++ I + ++ P Sbjct: 65 NRTTGASLVLVLFVGVMLLITFGLVPSIWRQGVALVTDLPTMLDKGFITLKGFVEQYPQF 124 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + +L + + L T I + + + L + I + + +FF Sbjct: 125 LSVEQL--------DASVGELKKLLDTQHILDLGKQLIGYSASLLVLMVYAILVPLLVFF 176 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +D + + +K+ + + I + G I + G + + Sbjct: 177 FLKDKDELVRGSKRFIP-ANRDLARKVWLEMNQQIFNYIRGKVIEIVIIGAASYIFFAIM 235 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-K 294 + LGV+T +IP GA + +++ + I + G + +D Sbjct: 236 DLRYAALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGISPEFGYLMLGYGIIQALDGN 295 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L P L + L + ++ G+ G+F L +L+ + A K E Sbjct: 296 LLVPILFSDAVDLHPVFIIAAVLVFGGLWGVWGVFFAIPLASLVKAVVNAWPKADKPELE 355 Query: 355 KISSN 359 K + Sbjct: 356 KSKTE 360 >gi|15604477|ref|NP_220995.1| putative permease PerM [Rickettsia prowazekii str. Madrid E] gi|8928516|sp|Q9ZCT3|Y630_RICPR RecName: Full=UPF0118 membrane protein RP630 gi|3861171|emb|CAA15071.1| PUTATIVE PERMEASE PERM HOMOLOG (perM) [Rickettsia prowazekii] gi|292572259|gb|ADE30174.1| Permease PerM-like protein [Rickettsia prowazekii Rp22] Length = 351 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + + + P A II + P SK E S+ + I Sbjct: 1 MNRTAVFWLVFLTLFISGFMLITDTIKPFFIAFIISYLLQPAIYFIESKLEISNKLASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L + ++ + +L ++++ Sbjct: 61 IYLIFLSIFFLIFTILIPI-------IYGQIFTFINNIPKYKNYLQSEILPPIMGKIYSI 113 Query: 126 HLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +K F+ + + I R+ +I ++ + + + I LF+F RD Sbjct: 114 EPDIADKIKHSLSDFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWDK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I ++SL +I + ++ S G I + A+ L G+ + Sbjct: 174 IITNMESLLPIKTRPKILEILSAINNLLSSYIRGQLNICLLLSTYYSIAFTLIGIDLALL 233 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++T + +IP + I L G + + I L P ++ Sbjct: 234 LGILTGFLVIIPLLGTFISFLLTLIIGYLTFGITSKLLYIMIIYLIGNIGESYILTPKII 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L L F + G++G+F + + ++ I K +K Sbjct: 294 GDKIGLHPLWIIFAIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|15642161|ref|NP_231793.1| permease PerM, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586788|ref|ZP_01676570.1| permease PerM, putative [Vibrio cholerae 2740-80] gi|121727178|ref|ZP_01680345.1| permease PerM, putative [Vibrio cholerae V52] gi|147673150|ref|YP_001217681.1| putative permease PerM [Vibrio cholerae O395] gi|153801642|ref|ZP_01956228.1| permease PerM, putative [Vibrio cholerae MZO-3] gi|153818817|ref|ZP_01971484.1| permease PerM, putative [Vibrio cholerae NCTC 8457] gi|153822602|ref|ZP_01975269.1| permease PerM, putative [Vibrio cholerae B33] gi|153825615|ref|ZP_01978282.1| permease PerM, putative [Vibrio cholerae MZO-2] gi|153828640|ref|ZP_01981307.1| putative permease PerM [Vibrio cholerae 623-39] gi|227082287|ref|YP_002810838.1| putative permease PerM [Vibrio cholerae M66-2] gi|229507757|ref|ZP_04397262.1| hypothetical protein VCF_002986 [Vibrio cholerae BX 330286] gi|229512007|ref|ZP_04401486.1| hypothetical protein VCE_003417 [Vibrio cholerae B33] gi|229513809|ref|ZP_04403271.1| hypothetical protein VCB_001454 [Vibrio cholerae TMA 21] gi|229519143|ref|ZP_04408586.1| hypothetical protein VCC_003171 [Vibrio cholerae RC9] gi|229522114|ref|ZP_04411531.1| hypothetical protein VIF_002659 [Vibrio cholerae TM 11079-80] gi|229524160|ref|ZP_04413565.1| hypothetical protein VCA_001746 [Vibrio cholerae bv. albensis VL426] gi|229528829|ref|ZP_04418219.1| hypothetical protein VCG_001917 [Vibrio cholerae 12129(1)] gi|229607302|ref|YP_002877950.1| hypothetical protein VCD_002213 [Vibrio cholerae MJ-1236] gi|254226899|ref|ZP_04920467.1| permease PerM, putative [Vibrio cholerae V51] gi|254291395|ref|ZP_04962188.1| permease PerM, putative [Vibrio cholerae AM-19226] gi|254849244|ref|ZP_05238594.1| permease PerM [Vibrio cholerae MO10] gi|255745105|ref|ZP_05419054.1| permease PerM [Vibrio cholera CIRS 101] gi|262153505|ref|ZP_06028635.1| permease PerM [Vibrio cholerae INDRE 91/1] gi|262167515|ref|ZP_06035221.1| permease PerM [Vibrio cholerae RC27] gi|297582058|ref|ZP_06943977.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298497820|ref|ZP_07007627.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656715|gb|AAF95307.1| permease PerM, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548955|gb|EAX58994.1| permease PerM, putative [Vibrio cholerae 2740-80] gi|121630423|gb|EAX62816.1| permease PerM, putative [Vibrio cholerae V52] gi|124122819|gb|EAY41562.1| permease PerM, putative [Vibrio cholerae MZO-3] gi|125620581|gb|EAZ48947.1| permease PerM, putative [Vibrio cholerae V51] gi|126510660|gb|EAZ73254.1| permease PerM, putative [Vibrio cholerae NCTC 8457] gi|126519850|gb|EAZ77073.1| permease PerM, putative [Vibrio cholerae B33] gi|146315033|gb|ABQ19572.1| putative permease PerM [Vibrio cholerae O395] gi|148875911|gb|EDL74046.1| putative permease PerM [Vibrio cholerae 623-39] gi|149740766|gb|EDM54865.1| permease PerM, putative [Vibrio cholerae MZO-2] gi|150422725|gb|EDN14679.1| permease PerM, putative [Vibrio cholerae AM-19226] gi|227010175|gb|ACP06387.1| putative permease PerM [Vibrio cholerae M66-2] gi|227014058|gb|ACP10268.1| putative permease PerM [Vibrio cholerae O395] gi|229332603|gb|EEN98089.1| hypothetical protein VCG_001917 [Vibrio cholerae 12129(1)] gi|229337741|gb|EEO02758.1| hypothetical protein VCA_001746 [Vibrio cholerae bv. albensis VL426] gi|229341039|gb|EEO06044.1| hypothetical protein VIF_002659 [Vibrio cholerae TM 11079-80] gi|229343832|gb|EEO08807.1| hypothetical protein VCC_003171 [Vibrio cholerae RC9] gi|229348990|gb|EEO13947.1| hypothetical protein VCB_001454 [Vibrio cholerae TMA 21] gi|229351972|gb|EEO16913.1| hypothetical protein VCE_003417 [Vibrio cholerae B33] gi|229355262|gb|EEO20183.1| hypothetical protein VCF_002986 [Vibrio cholerae BX 330286] gi|229369957|gb|ACQ60380.1| hypothetical protein VCD_002213 [Vibrio cholerae MJ-1236] gi|254844949|gb|EET23363.1| permease PerM [Vibrio cholerae MO10] gi|255736935|gb|EET92331.1| permease PerM [Vibrio cholera CIRS 101] gi|262024087|gb|EEY42782.1| permease PerM [Vibrio cholerae RC27] gi|262030742|gb|EEY49376.1| permease PerM [Vibrio cholerae INDRE 91/1] gi|297533753|gb|EFH72595.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297542153|gb|EFH78203.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 354 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 121/349 (34%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T +I Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTLAVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQ---KFITSLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 126 HLEIVESVIGNAKNKVLGMGESVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGILPR-NRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +WK +E Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEP 352 >gi|318061004|ref|ZP_07979725.1| hypothetical protein SSA3_23870 [Streptomyces sp. SA3_actG] gi|318079871|ref|ZP_07987203.1| hypothetical protein SSA3_25091 [Streptomyces sp. SA3_actF] Length = 465 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 113/347 (32%), Gaps = 21/347 (6%) Query: 17 MFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ L G VL A + P S ++ + + Sbjct: 12 ALLLIACFQLGTWAFHRLTGLLINVLIAFFLALAIEPAVSWMSAR-GMRRGAATGLVFLG 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + L +++ +V ++ V +W++ G + +EL + Sbjct: 71 VLIFAAGFVTLLGSMLAGQIQNMVEDFP---KYLDSVIKWVN----GTFHTELSRLEVQD 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + +++ + + A G +F L + F+F DG + + L Sbjct: 124 SVLHSDWLQRYVRNSASGVLDVSAQVLGGLFQLLTLL-----LFAFYFAADGPRLRRALC 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ A + I ++A+ G+ + G+P ALGV Sbjct: 179 SVLPPAKQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYILFQALGIPYAPALGVWVG 238 Query: 250 IMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++ IP A+ + + + + A + ++ I + L+P L + + Sbjct: 239 LVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLVFVVIYQQFENYLLQPKLTARTVDIH 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++ G +G +G + +A + + + Sbjct: 299 PAVAFGSVIAGTALLGAVGALVSIPAVATLQAFLAAYVKRYDVTDDP 345 >gi|183602050|ref|ZP_02963419.1| hypothetical integral membrane protein in upfo118 [Bifidobacterium animalis subsp. lactis HN019] gi|241190536|ref|YP_002967930.1| hypothetical protein Balac_0492 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195942|ref|YP_002969497.1| hypothetical protein Balat_0492 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218935|gb|EDT89577.1| hypothetical integral membrane protein in upfo118 [Bifidobacterium animalis subsp. lactis HN019] gi|240248928|gb|ACS45868.1| Hypothetical permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250496|gb|ACS47435.1| Hypothetical permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793523|gb|ADG33058.1| Hypothetical permease [Bifidobacterium animalis subsp. lactis V9] Length = 529 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 97/319 (30%), Gaps = 15/319 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ AL + P+ I +V ++ + IV + + +M +V Sbjct: 59 IVIALFLALAVEPLVIRLIRH-GWKRGVASVTCLAGLLVIVIVLMALFGNMFVQQMISMV 117 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + L L +K + + A Sbjct: 118 KGLPDLYNQFAAFVDAKTHFK------------LPEMNDLGGEIMKNIKGSWVTDFAGQA 165 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 M L L++ ++ F+ G + + + + + +V I Sbjct: 166 VSTTMGVLGQILNLTTALMVAFYISIAGPKLRRSVCQWIAPRSQRRFLMVWTVVQDQISG 225 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLI 271 +I+A + + VP + L + I++ +P G I ++ Sbjct: 226 FLFSRSILAAINAACMSVFLMIIKVPYWLPLALFCGIVSQFVPTLGTYIGGALPVLFAWG 285 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + I A + ++ + I + L P + + L F ++ G G F+ Sbjct: 286 ERGIGYAIGVVVFITVYQQIENLVLSPKISERTMDLNPCIAFLTVLFFGSIFGAAGAFLA 345 Query: 332 PVLMALIAVIWKESIMAIK 350 + A I V+ K ++ Sbjct: 346 LPITASIQVLLKVAMKRYP 364 >gi|16079968|ref|NP_390794.1| permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310857|ref|ZP_03592704.1| hypothetical protein Bsubs1_15911 [Bacillus subtilis subsp. subtilis str. 168] gi|221315183|ref|ZP_03596988.1| hypothetical protein BsubsN3_15812 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320100|ref|ZP_03601394.1| hypothetical protein BsubsJ_15723 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324382|ref|ZP_03605676.1| hypothetical protein BsubsS_15882 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312450|ref|YP_004204737.1| putative permease [Bacillus subtilis BSn5] gi|8928522|sp|O34991|YTVI_BACSU RecName: Full=UPF0118 membrane protein ytvI gi|2293327|gb|AAC00405.1| YtvI [Bacillus subtilis] gi|2635381|emb|CAB14876.1| putative permease [Bacillus subtilis subsp. subtilis str. 168] gi|291485351|dbj|BAI86426.1| hypothetical protein BSNT_04258 [Bacillus subtilis subsp. natto BEST195] gi|320018724|gb|ADV93710.1| putative permease [Bacillus subtilis BSn5] Length = 371 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 108/333 (32%), Gaps = 14/333 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-----------FLAVIATVS 69 + + Y+ P L ALI+ P+ T A Sbjct: 23 IAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFPRTINVLGVLAFFLLAAFGVLTI 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + +L + +S I + + ++H Sbjct: 83 LVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELTLLFQELETNQQASIVTH 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q+L + + I RF + + +IF ++A FF +D + L Sbjct: 143 IQTLGDSAAKNAG-LLLSHILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAMLV 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + A K IS + K + ++ +++ L V + + Sbjct: 202 LILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKVEHAATIAFLIG 261 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ ++P GA F +YL I G + A + + + + I + P ++ I + Sbjct: 262 LVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILY-LVVLIQRQLTEPKILSKSIGID 320 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T L G + G LGL GP ++ +I Sbjct: 321 PLATLIALFAGFKLFGFLGLIAGPAVLVIIQAF 353 >gi|75762603|ref|ZP_00742452.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489912|gb|EAO53279.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 313 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 110/306 (35%), Gaps = 5/306 (1%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A ++ + P + S + KK S + V+ LF+ ++ + ++ L+ Sbjct: 1 MAGVLFYILHP-FVSLLEKKGVSRIVSIASIYLIVIGLFVFLVVTVIPIIKDQIDALIDN 59 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + R G ++L+ + + T T + + + Sbjct: 60 LPYFGHEIEQAARRF----GESNLLGKIQENLNINVANMVKDYTVDFTKSLSSVTGNVTG 115 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 F + L+ + + LF+ +DG + +I + I S Sbjct: 116 FLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQRQPAAMRILDDMHYAISSYI 175 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 G I+++ G++L Y + G+ V L ++ I+ ++P PI ++ + + Sbjct: 176 RGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVPYVGPIIAITPALIIAFIDSP 235 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + + K + P ++G + + + F ++ G++G+ + Sbjct: 236 AMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFIILTAGNLFGIMGIILAIPGY 295 Query: 336 ALIAVI 341 A++ V+ Sbjct: 296 AILKVL 301 >gi|323705254|ref|ZP_08116829.1| protein of unknown function UPF0118 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535156|gb|EGB24932.1| protein of unknown function UPF0118 [Thermoanaerobacterium xylanolyticum LX-11] Length = 343 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 132/341 (38%), Gaps = 16/341 (4%) Query: 14 WMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+ ++L Y +K P+L ++I+ + PI + KK +I Sbjct: 14 IIIILVVLYFFYMNANKIKEILLPLLVSIILAYLINPIVTYIE-KKGIKRVQSIIIVYFL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW-ASELWTKHLS 128 +M + + +F+F + EM L + P ++S + + + +L Sbjct: 73 LMIVVSLFAIFIFPVIVNEMSNLFKMI----------PDYISLLNDKVNNIKNDYLSYLP 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++ I A + + + +++I I F+ +D + + Sbjct: 123 KEFNKIFIKRANMFDKQMELIVDRAMQSVISMTGHLVNLILSPIITFYLLKDKEVLKNGI 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + KI + + V+ + I++ + + V + +G++ Sbjct: 183 NEFIPQKMRETFLKILKDIDYVLSNYIRSQIYISLIVTFLTSIGLMILRVKYSLLIGILA 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +IP PI + ++ + + + + F+ + I + P ++ + L Sbjct: 243 GIFNVIPYFGPILGSIPAVVMGLMDSFYKGVWSFVVFFLVQQIESAIIAPKIMSDNVDLH 302 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+ G + G+LG+ + ++A++ VI+K+ + Sbjct: 303 PITVIIALLVGEQFFGILGMLLSVPVVAVVKVIFKDIFIKA 343 >gi|315606358|ref|ZP_07881374.1| membrane protein [Prevotella buccae ATCC 33574] gi|315252049|gb|EFU32022.1| membrane protein [Prevotella buccae ATCC 33574] Length = 387 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 136/370 (36%), Gaps = 17/370 (4%) Query: 1 MRETMLNPQGIMRWM-IMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW+ I +IL LY L G P A + + +PI + Sbjct: 1 MNEQKITFDKLVRWVGIGALILAVLYLVNYLSGALLPFFIAWLFAYLLYPIVKFIQYRLH 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 LA+I T+ ++ I +++L M+E E + +V H Sbjct: 61 VKVRALAIIVTMILVISVIAGVIYLIIPPMIEQFEKLGEVTTKWLHTTTHTNN-----LT 115 Query: 117 MWASELWTKHLSHPQSLKILSE-TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + E + S + + + + + F + + + S+I ++ +F Sbjct: 116 TYIQEWLQANQSEIEKFFKSRDFSDAIKTAMPRLFSFVGQTASVVMSIIASMITLLY-MF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++Q + +W ++ + V + + + G ++A+ G++ + + Sbjct: 175 FILLDYEHLTQNWIRIFPQKNRPFWHELMQDVERELNNYIRGQGLVALCMGIMFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G P + LG++ I+ ++P + + ++K +++G + + Sbjct: 235 IGFPMAIGLGILIGILDLVPYLHTFALIPTAFLAMLKAADTGQNFWWVFGLAVIVFIVVQ 294 Query: 293 ---DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 D P ++G + L L +G +GL I L LI W+ + Sbjct: 295 IITDFITTPKIMGKAMGLNPAILLLSLSVWGTLLGFIGLIIALPLTTLIIAYWQRYVTKE 354 Query: 350 KENKEKISSN 359 K SN Sbjct: 355 HAPKRSSISN 364 >gi|260886752|ref|ZP_05898015.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|330839431|ref|YP_004414011.1| protein of unknown function UPF0118 [Selenomonas sputigena ATCC 35185] gi|260863604|gb|EEX78104.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|329747195|gb|AEC00552.1| protein of unknown function UPF0118 [Selenomonas sputigena ATCC 35185] Length = 342 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 119/350 (34%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + ++L + +F + +L++ P K+ A + ++ Sbjct: 9 SIILAITFTLLLSAFWFFPDLAFIIFLSLLLQLLLQPPVDFLQRKRVPR-VLAAGLIVIA 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++ L + + VS + L +IP + L ++ Sbjct: 68 FIALLTGLVVLLSLSFVPTFRNFVSDLPNITLS-------LQNIPFVSDSDLLRSELSDV 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ L LK++ + ++ + +I F+ +DG +I L Sbjct: 121 LADLRSLGTDLLKSSLTFLLE---------IFGKFMAFVIIIFVTFYLLKDGKNIRNWLA 171 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + +R ++ G V+ + G+P ++ Sbjct: 172 GLFPQASRRRVLNLFNDILRALRVYIFSQIVMCAITGTVVFLYFEFTGLPYASVFAFLSG 231 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P P + +A I+L + L+ + + + P L+G + L Sbjct: 232 LGEFVPVLGPTAASAFGIFLTATESRGLVLQTALFYIVLTQVNHNFVYPTLIGKSLNLHP 291 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G++ G +G G+F+ + ++ ++ + +E + Sbjct: 292 VAIILGVIFGGEILGPAGMFLAVPFIVIVKLVIADIYHDRQEVVRQNDEE 341 >gi|192292201|ref|YP_001992806.1| hypothetical protein Rpal_3832 [Rhodopseudomonas palustris TIE-1] gi|192285950|gb|ACF02331.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 372 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 106/339 (31%), Gaps = 21/339 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++++ L+ L+ +A +I + + S +I ++++ Sbjct: 41 IALVLMIVLWVLRDILLLGFAAALIACVLRGAANVLHRRTGLSDGLSLLIVVMTIVLALG 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLK 134 L + E+ ++ ++ Q LW + +L Sbjct: 101 ALLFWRGTAIANEVAQMYDQLTAQMQS-------------------LWQQMSGSGWPALL 141 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L + + + L S++ ++ F S L Sbjct: 142 AKQLRNLSESARKNLTGYVPGVASSVLGIGGSVVVVLATALFLAISPRSYMDGALRLLPV 201 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + ++ FLG + L++G +L GVP L ++ ++ + Sbjct: 202 QWRPRGRHVMLETGSTLQLWFLGQLADMLIVALLIGVGLYLLGVPMAPTLALLAGLLNFV 261 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P ++ ++ + + + A + L + + P + + L T Sbjct: 262 PYVGALAGAVPAVLVALAQSPSLALWVALLFICVQTLEGNVVAPLIQRRTVSLLPALTIL 321 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKEN 352 G++GL I P+ AL+ + I + E Sbjct: 322 SQTILGTLFGVVGLVIATPLTAALMTAVRMIYIEDLLER 360 >gi|293391679|ref|ZP_06636013.1| PerM family permease [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952213|gb|EFE02332.1| PerM family permease [Aggregatibacter actinomycetemcomitans D7S-1] Length = 353 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 117/347 (33%), Gaps = 13/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + + I+F V++YF AP+L A+++ + WP+ K + Sbjct: 10 RRRFSDPQAMGLFAILFFGFVAIYFFSDLIAPLLVAIVLAYLLEWPV-RLLNEKLKCPRL 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + S L + +L L +M L+S + WL +P Sbjct: 69 LATGLVIGSFTGLVFLVVLVLIPNLWTQMVNLLSDLPHMFNR---FNEWLLSLPVRYPDM 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S ++K ++ + + + + + ++ FF +D Sbjct: 126 IDAQTVESIFGTVKEKILGLGESALKLSLASIMNLVTLGIYAFLVPLMV-----FFLLKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + K+ + + I + G + + +V + + + G+ Sbjct: 181 KRQLMDGVSRFLPR-NRTLASKVWVEMQQQIANYIRGKLVEILVVTVVTYAIFLIFGLNY 239 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRP 298 + L V + ++P GA + V + + + G+ + + + + L P Sbjct: 240 PLLLAVAVGLSVLVPYIGAVLVTIPVVLVAIFQFGDTHTFWYIVIAFVVSQLLDGNLLVP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 FL + L L ++ G G+F L L+ + Sbjct: 300 FLFSEAVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 346 >gi|289209151|ref|YP_003461217.1| hypothetical protein TK90_1990 [Thioalkalivibrio sp. K90mix] gi|288944782|gb|ADC72481.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. K90mix] Length = 372 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 118/360 (32%), Gaps = 12/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ ++ ++ + + F AP+L++LII + I Sbjct: 10 RRHFTDPQVVILAFLLLAGFLIIVFAGRILAPLLASLIIAYLLEGAVQKLIRLHVPR-LL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + L + L + ++ +LV ++ + G + L + + E Sbjct: 69 AVTIVLLVFLALTVAALFSVVPLMSAQVTQLVRELPGMIREGQALLLQLPERYPQLITDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + Q+ + + F+ +D + +I + + +FF +D Sbjct: 129 QVRELMGAIQAEATML--------GQRVVSFSLAGARHLVDVVIYLIVVPLMVFFMLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + S ++ R V I S G I + V + G+ Sbjct: 181 DLILDWVRSFMPRDS-HLASEVWREVNVKIASYVRGKFIEILIVWAVSFLTFNWFGLEYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 V L + I +IP GA + V+ + G L + + F+ L P Sbjct: 240 VLLSFMVGISVIIPYIGAAVVTIPVAAVAYFQFGLSSEFAWLLIAYGVIQFLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + + GL G+F L L+ + K K + + Sbjct: 300 LFSEVVNLHPVAIIAAVFVFGGIWGLWGVFFAIPLATLVHAVIKSWPRTDKLEARREAEQ 359 >gi|284044322|ref|YP_003394662.1| hypothetical protein Cwoe_2868 [Conexibacter woesei DSM 14684] gi|283948543|gb|ADB51287.1| protein of unknown function UPF0118 [Conexibacter woesei DSM 14684] Length = 400 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 2/252 (0%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK-TNGIDFIPRFAS 154 V A VP +++D+ + +E + L E + N +D S Sbjct: 112 VEEATNLADDVPGYVNDLQEWVNNNERLKDLDRQYDIVDRLRERAEELPNHLDDAASTLS 171 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 G + + ++I F G ++ + + + Sbjct: 172 DVGGTIVGSLFAAFNILILSIFMVASGRRWVDLAIGFARPEHVPRIRRAVDRIGIAVGNY 231 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKG 273 G + A G+ + GVP L V+TA+ +IP GA I+ V I Sbjct: 232 VGGALLQATIAGVTTFVVLTILGVPFAAPLAVLTALFDLIPLVGATIAAVLVGIVTAFHD 291 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 +W I + ++P + +++ ++ G G++G + Sbjct: 292 FPVATIVWVIWAIAYQQIENNVIQPQIQRRAVEIHAFAVLVSVLFGATLFGIVGALLAIP 351 Query: 334 LMALIAVIWKES 345 + A I + +E Sbjct: 352 VAASIQIALREW 363 >gi|190573154|ref|YP_001970999.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] gi|190011076|emb|CAQ44685.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 389 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 132/348 (37%), Gaps = 16/348 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I ++ L P + AL + + P+ + V+ + Sbjct: 19 ILFAGLIGWVVWLLAPILTPFVLALALAWLGDPLVDRIEATGRSR--------MTGVVLV 70 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQ 131 F +L + ++ + + ++ WL IP + L P Sbjct: 71 FAAMVLVIVALLLVLVPMIERQITTLIAVAPQAQAWLMEKGIPWFEQKTGLEVMQWLDPD 130 Query: 132 SLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + G + SR G + + ++I+ + I F+F RD + +++ Sbjct: 131 RLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ ++R +V+ + G ++ + G++ S L G+ + +G+I Sbjct: 191 SVIPRNHIGTISALARESNEVLGAFIRGQFLVMLALGVIYASGLSLVGLKLGLLIGLIAG 250 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE---LFIVDKTLRPFLVGGPI 305 +++ IP GA I L++ F+ L L G + + L P +VG I Sbjct: 251 LISFIPYLGATTGVLMAVIAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ + + A+ V+ + + ++++ Sbjct: 311 GLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSE 358 >gi|94985813|ref|YP_605177.1| hypothetical protein Dgeo_1713 [Deinococcus geothermalis DSM 11300] gi|94556094|gb|ABF46008.1| protein of unknown function UPF0118 [Deinococcus geothermalis DSM 11300] Length = 371 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 117/350 (33%), Gaps = 14/350 (4%) Query: 10 GIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++++F + L+ ++ A +I + + P+ + + + + Sbjct: 21 RVAVFLLLFYLAYRLFSEIRSVVVVFAVAYLIAYLANPMLNWLERGRVKR-----GLGVF 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LFI + +LV+ + + L+ + G + A + Sbjct: 76 FVLLLFIGIFALAAALIVTVSTQLVALISGLPAQVGHLNELLNTVFGWLGAHGIPDTDSV 135 Query: 129 HPQSLKILSETF--LKTNGIDFIPRFASRFGMIFLDYCL------SIIFMIIALFFFYRD 180 + + + L N + + S G I ++ +++ + D Sbjct: 136 RMRLTEAVQTALQNLGRNIVPILQNLLSSTGTILSSLVSVGSVLGQVVLILLLSVYLMLD 195 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ L + + + +V + G +IA G+ + L GVPS Sbjct: 196 YSRVNAALLKAFPRPWQPRVLEFTGLVGTSVGGYVRGQLVIATFIGVFVWLGLTLIGVPS 255 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 A+G + ++P P+ ++ L + + + I L P++ Sbjct: 256 AAAIGFLAGAFNIVPYLGPVIGATPALLLALPFGWVKMLLVIVIFVAANQIEGNFLSPYI 315 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L + ++ G +G G + +AL ++ ++ + Sbjct: 316 LSKTTDLHPVTVLLAILIGASLLGFAGALLSVPAVALGKLMLEKYYYPSR 365 >gi|188583917|ref|YP_001927362.1| hypothetical protein Mpop_4731 [Methylobacterium populi BJ001] gi|179347415|gb|ACB82827.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 649 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 115/366 (31%), Gaps = 27/366 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + + Sbjct: 11 LRQALPVVTTLASLLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRLRVPRAA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----------VLANQHGIPVPRWL 110 + ++ ++ L + E +L + + + A + L Sbjct: 71 AVLLVVLLAFGM-----LGAVGSLIAREAAQLAADLPRYSLTLRDKITALRAATAERGGL 125 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF----------IPRFASRFGMIF 160 SD G + P + K S++ L T + + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTDSDSQLGTAERPMQVEIHAPRSGVLKTLGSVAGGV 185 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 L ++ +++ F + + L + F+ I Sbjct: 186 LHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFIAQLI 245 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNA 278 + + GLV+G W GVPS + GVI I +P + ++I + + A Sbjct: 246 LNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVISAVLPLAIAVAVDPGWSMA 305 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + I I + P L G + + G +GL + L + Sbjct: 306 IQVAILFLIVEPIAGHVVEPLLYGHSTGISPVAVILAATLWTFLWGPIGLLLATPLTVCL 365 Query: 339 AVIWKE 344 V+ + Sbjct: 366 VVLGRH 371 >gi|238916532|ref|YP_002930049.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Eubacterium eligens ATCC 27750] gi|238871892|gb|ACR71602.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Eubacterium eligens ATCC 27750] Length = 390 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 117/355 (32%), Gaps = 14/355 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSW-----------PIYSSFISKKEES--STFLAVIA 66 IL S+ +L G P + +I F ++ KK ++ Sbjct: 34 ILDSISYLAGLVMPFIIGAVIAFVFNVPMKAIEKGLNRLFDKRCKKKHPRLIRVLAYMLT 93 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGMWASELWTK 125 + ++ + L + + + +L+ +V A + I + LS P + Sbjct: 94 LILILAIIAGVLFVVVPELVNTIADLIGQVPTAVNNLINWLQVKLSAYPEYEEKLSSISI 153 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S + + I+ S F ++ + +F + LF R Sbjct: 154 NWDSVLSNVMNFLSIGTKGIINGGIGAISGFFSGVANFFIGFVFSVYVLFQKERLTAQCK 213 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ R+ + G + A G + + +P + +G Sbjct: 214 KLMYVCMPENRADKIVEVLRLTNTTFSNFLSGQCLEACILGTMFVITLSILRMPYALLIG 273 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I A+ A+IP V + L++ + A I I + P +VG + Sbjct: 274 IIIAVTALIPIVGAFIGCIVGVILIMMTSPLKALIFVGVFLILQQIEGNLIYPHVVGSSV 333 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 LP + + G G++G+ + ++ + + + E KE F Sbjct: 334 GLPGIWVLVAVTIGGNLFGIMGMLTFIPISSVCYALLRTYVNRKVEEKEIDKGKF 388 >gi|288553488|ref|YP_003425423.1| putative autoinducer -2 export protein AI-2E [Bacillus pseudofirmus OF4] gi|288544648|gb|ADC48531.1| putative autoinducer -2 export protein AI-2E [Bacillus pseudofirmus OF4] Length = 362 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 109/311 (35%), Gaps = 13/311 (4%) Query: 14 WMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++I+++ + + K FAP++ A ++ + P + K + +I Sbjct: 18 FLIIYLGSLVDWIFKPIVVLVQTLFAPIVLAGVLFYLLRPFVNLLSKKMP--RSISILIL 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + L +L + + L + + I + S Sbjct: 76 YLIAIGLITSLILLVGPELQRQFTSLTRNWPTFMNE---IRNMIIAIQENEYISRFQESE 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + E ++ TN + I + F + + +I + L++ ++G Sbjct: 133 NFSLEEITSNLEEYM-TNIMSSIGSNVASFIGFIANVVIVLIIIPFVLYYMLKEGEKAPN 191 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ L ++I + + S G I++I G+++ Y + G+ + L + Sbjct: 192 QVLRLLPRKHQKEGQRILSDMDYALSSYIQGQIIVSICVGVLVYIGYLIIGIEYPLVLAL 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP P T + + + F A + + + I + P ++G + Sbjct: 252 VAMFTNVIPFVGPWIGTFPGVIVGFLDSPFMALLVIIVVVVVQQIESNLISPQVMGRKLD 311 Query: 307 LPFLPTFFGLV 317 + L L+ Sbjct: 312 IHPLTIILLLL 322 >gi|293365275|ref|ZP_06611992.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307703816|ref|ZP_07640757.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291316725|gb|EFE57161.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307622651|gb|EFO01647.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 369 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 114/338 (33%), Gaps = 8/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + P+ + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPVVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L ++ + + + D+ + + +L + Sbjct: 89 VVYLLPILINQLTSL---IISSQNIYSRLQDLIIDLSMNPVFQNIDIQQTIQQLNLSYVD 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 146 ---ILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTILKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I + I + + + I I L P +VGG +K+ + L Sbjct: 263 GPSIGLIPMVIANVFT-DPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLL 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G++G+ + ++ I K + +KE Sbjct: 322 LLSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|148261519|ref|YP_001235646.1| hypothetical protein Acry_2536 [Acidiphilium cryptum JF-5] gi|326405006|ref|YP_004285088.1| hypothetical protein ACMV_28590 [Acidiphilium multivorum AIU301] gi|146403200|gb|ABQ31727.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|325051868|dbj|BAJ82206.1| hypothetical protein ACMV_28590 [Acidiphilium multivorum AIU301] Length = 364 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 122/325 (37%), Gaps = 7/325 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++A I + P S+ + + A+I ++++ + L L+ ++ Sbjct: 35 LLPFVAAAGIAYFLDPAVSAL-HRLGLPRSLGAIIMLLAMIAGVGLCALLLYPLISAQIS 93 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ I + + + + + +S+ + +E N Sbjct: 94 LLAQQL----PGMIAGLQKFTAHQISLIQARFGSGFVSNKLQSLVSNEAGAIVNFAGSAA 149 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R G + ++ I F+F RD + +LDS + + + ++R + ++ Sbjct: 150 RQVLGTGFALFNILTLLVITPIVAFYFLRDWPLVMGRLDSWLPRSYESVIRNLAREISRI 209 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G I + G+ + LAG+ + +G+ +++ IP I SI L Sbjct: 210 LNAWLRGQAICCLFLGVFYAATLTLAGLNLGLVVGLTAGLLSFIPYVGTIVGAVSSIVLA 269 Query: 271 IKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + L + G + + D + P +G + L + F L G T G LG+ Sbjct: 270 LGQFGGLDHVLVVGGIFVIGQLLNDYVVAPRFLGDRLGLSSVWVIFALFAGAETFGFLGV 329 Query: 329 FIGPVLMALIAVIWKESIMAIKENK 353 + + A + V+ + + ++ Sbjct: 330 LLAVPVTATLGVLARFWLRHYLQSP 354 >gi|126650494|ref|ZP_01722717.1| hypothetical protein BB14905_07888 [Bacillus sp. B14905] gi|126592650|gb|EAZ86649.1| hypothetical protein BB14905_07888 [Bacillus sp. B14905] Length = 322 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 108/311 (34%), Gaps = 2/311 (0%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A I F PI F + + S + + + + M ++ Sbjct: 1 MPLILAAISAFFLEPIVMFFKRRWKMSRKIAVAFIYIVSVIIISIICYISITQIMTQIIL 60 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + + + + S ++ + +T F Sbjct: 61 LSKQAPYYISKLSDMWLHMQENISKYTEDFPPEVSTSLQKTTMDFIKKIEETFLSFFNYS 120 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S F +S++ +IALF F D + + + K I + Sbjct: 121 KVSAFFSEIPSLFISLLVYMIALFLFMLDLPKLKRITYKYLKPNTAKKIKIILNRLKDAT 180 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 ++ G V L + + +I ++ ++P G+ I +Y L Sbjct: 181 FGYMKAHLFVSFIIGGVTLIGLLLIQPKYAITMTIIIWLIDIVPFLGSIIILAPWGLYHL 240 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + GN A LF+ AI L I+ + + P L+G I L LPT + G++ G++GL + Sbjct: 241 LMGNTAIAVKLFILAAILL-IIRRVVEPKLMGEHIGLSTLPTLIAMFIGLQLFGIIGLLV 299 Query: 331 GPVLMALIAVI 341 GP ++ + Sbjct: 300 GPFVIIFFIAL 310 >gi|306825359|ref|ZP_07458699.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432297|gb|EFM35273.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 371 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 113/337 (33%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + PI + + + + ++ +++ +V Sbjct: 31 AIITPFVTVVNTIMIPFLLGGFFYYITNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVG 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L ++ + + + D+ + + +L + Sbjct: 91 VVYLLPILINQLTSL---IISSQNIYSRLQDLIIDLSMNPVFQNIDIQQTIQQLNLSYVD 147 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 148 ---ILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGRKLLPMLERTVLKHDK 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 205 LNLSSLLTNLNATIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + + I I L P +VGG +K+ + L+ Sbjct: 265 GPSIGLIPMVIANVFTDPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLLL 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + +++ I K + +KE Sbjct: 325 LSSNIYGVIGMIVAVPTYSILKEITKFLAKLYENHKE 361 >gi|302871869|ref|YP_003840505.1| hypothetical protein COB47_1227 [Caldicellulosiruptor obsidiansis OB47] gi|302574728|gb|ADL42519.1| protein of unknown function UPF0118 [Caldicellulosiruptor obsidiansis OB47] Length = 351 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 120/359 (33%), Gaps = 16/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISK 54 M L + + + +I + +YF P L AL + P +K Sbjct: 1 MHIIKLVKRYFTDILFIALIAIVIYFFANMKAFWPILIPFLIALFFSYLLKPCVDFLETK 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 I+ + + + +F Y + VS+ Q+ + Sbjct: 61 IRSRD-----ISILISFAIIFGITVMVFVYFI---PLFVSETKQLIQNVPEYIALIQKW- 111 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 S+L K + + + ++ + F L + + I Sbjct: 112 FYEIDSKLLNKLNIDIKEILNANSINIEAVSKQTLSIFL-NIVKSISSNILYYLLIPIIS 170 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ RD + + L + I + +V+ G + A+ GL+ + Sbjct: 171 FYILRDWKRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAVIVGLLSFFGFS 230 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L V LGVIT I +IP PI + + + + + A + ++ + + Sbjct: 231 LLSVRYAALLGVITGIGNLIPYFGPIFSSIPGVIIALSDSYIKAILVIVFLVLLQQVDSF 290 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + L L ++ + G + +F + A+I +I+ + IK + Sbjct: 291 IISPRVIGSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKPEE 349 >gi|111221300|ref|YP_712094.1| hypothetical protein FRAAL1860 [Frankia alni ACN14a] gi|111148832|emb|CAJ60510.1| hypothetical protein; putative membrane protein; putative IMP dehydrogenase / GMP reductase domain [Frankia alni ACN14a] Length = 408 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 112/331 (33%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++I+L+++ ++ P+++ L+I P+ F V Sbjct: 75 RLIIIGAAVYILLMAIGRVRVVVIPIIAGLLIAALIHPLAHRFQRLGLPRLGAAFAALFV 134 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + + + E+ + +V + + +L++ P + S++ Sbjct: 135 FFAVLAGA-AVAVGFNAANEIPTVSDQVSEGVE---QIRGYLTNGPFHLSQSQIDDLVDD 190 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++L N + + + ++ + + FFF DG I + Sbjct: 191 IRRNL---------ANNRGRLVSGVISGASVAAEVITGLLVALFSTFFFLYDGDRIWDWI 241 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R I G +A + + GVP L ++T Sbjct: 242 VTRFPAGAEDRVRGAGREAWLTITGYIRGTVFVAAVDAFGIAMGLVGVGVPLVAPLALLT 301 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P GA ++ A + L+ G + +A + I L+P ++ ++L Sbjct: 302 FFGGFVPIIGATVAGVAAVLVTLVSGGVTDALIILAVVLAVQQIEGHLLQPLVMRRAVRL 361 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L G G+ G +A++ Sbjct: 362 HPLAIVIALSAGGVLAGIPGAIAAVPFVAVV 392 >gi|225389457|ref|ZP_03759181.1| hypothetical protein CLOSTASPAR_03205 [Clostridium asparagiforme DSM 15981] gi|225044483|gb|EEG54729.1| hypothetical protein CLOSTASPAR_03205 [Clostridium asparagiforme DSM 15981] Length = 379 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 119/342 (34%), Gaps = 8/342 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ +I F+ V L FL FF P + II + P + + ++ Sbjct: 14 RLVLNILIPFMGWVFLCFLGPKLLRFFMPFVIGWIIALIANPPVRFLERRLKLVRKHSSI 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASEL- 122 + V V+ + I L LF + L + L V + +I Sbjct: 74 LIVVLVLAMVIGLLYLLFSRTAAGISALFKTLPQLYTALEADVKTNMEEISHLFQFFPPG 133 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + L A + + I++ +FF D Sbjct: 134 VQQAWNQLTANIGDALSMLVQKAAPPTMEAAGTVAKSIPGALVYSVVTILSSYFFIVDRD 193 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L Y++ ++ V ++ FL I L+L + +++ GV Sbjct: 194 RIIAFWKQLLPEWCTRYYRYLTGEVKHLVGGYFLAQFKIMFVVWLILMAGFFVLGVSYAP 253 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L + A + +P G + + L+ G A L L + ++ + ++P LV Sbjct: 254 VLSFLIAFLDFLPVFGTGTALLPWGVVKLLAGEYAFAAGLLLLYVLTQ-VIRQLVQPKLV 312 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + L L T L G + GL G+ + + ++K Sbjct: 313 GDSMGLNPLFTLILLFLGFKISGLAGMILAVPIGLFFMNLYK 354 >gi|24380070|ref|NP_722025.1| putative permease [Streptococcus mutans UA159] gi|290579951|ref|YP_003484343.1| putative permease [Streptococcus mutans NN2025] gi|24378063|gb|AAN59331.1|AE014998_8 putative permease [Streptococcus mutans UA159] gi|2952526|gb|AAC05771.1| putative permease [Streptococcus mutans] gi|254996850|dbj|BAH87451.1| putative permease [Streptococcus mutans NN2025] Length = 364 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 114/318 (35%), Gaps = 10/318 (3%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K FF P L + + + PI + ++ + + + +F V L L + Sbjct: 39 KTFFLPFLLGGFLYYITNPIVTFLENRFKIKRIW-------GITLIFAVLLSLLVFSITS 91 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF--LKTNG 145 + L++++ + L D+ W S K++ P LK + ++ + TN Sbjct: 92 LIPNLINQLTDLISASQNIYVGLQDL-FNEWKSNPAFKNIDIPVLLKQFNLSYVDILTNV 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D + S + + + ++ + LF+ +D + LD ++ Sbjct: 151 LDSVTVSVSSIVYMITNTVMILVLTPVILFYLLKDKDGLMPMLDRTILKNDRHNISQLLN 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K I G+ I A + Y + GV ++ I +IP P Sbjct: 211 QMNKTISRYISGVAIDAAFIFVFALIGYQIMGVQYAFLFALVAGITNVIPYVGPYLGLTP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + ++ I + P +VG +K+ L LV G GL Sbjct: 271 VVLAYVVSDPKKMIIAIIYIMTLQQIDGNIVYPRVVGSTMKIHPLTIMVLLVLGGNIAGL 330 Query: 326 LGLFIGPVLMALIAVIWK 343 +G+ + A+I I K Sbjct: 331 VGMLVAVPAYAIIKEIVK 348 >gi|329116864|ref|ZP_08245581.1| putative membrane protein [Streptococcus parauberis NCFD 2020] gi|326907269|gb|EGE54183.1| putative membrane protein [Streptococcus parauberis NCFD 2020] Length = 374 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 119/333 (35%), Gaps = 6/333 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F A ++ Y + + + + + ++ +S++ ++ L + + Sbjct: 40 LPFLYGAALAYVVNIVMS-TYETGLGRLIKGEKYASLKRAISMILAYLTFFTLLTWIISI 98 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +L++ + L Q + + K+ + + Sbjct: 99 VIPDLIASLSLMLQFDTASIKTVVHDLSHNQLIAKAIKYAGGVSEITKTISNYSHQLLQQ 158 Query: 148 FIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK--- 202 + F + + + +S+ + + + + +Q + L + Y ++ Sbjct: 159 LLSVFTNILTSVTMIASAVISLFVSFVFSLYVLANKEQLCRQGNLLVDTYTGIYAQRIHY 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ F+G +I AI G + ++ +P +GV+ A A+IP Sbjct: 219 FVGLLHSRFHGFFVGQSIEAIILGSLTALGMFILQIPFAATIGVLVAFTALIPVVGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L++ ++ A ++ + + P +VGG IKLP + + G Sbjct: 279 LVIGFILIMTQSMTQAIIFVVFLVVLQQFEGNLIYPRVVGGSIKLPGMWVLLAITIGASL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ + L A + ++++ + ++K Sbjct: 339 KGIIGMVVAVPLAATFYQMIRDNVEKKQAIQKK 371 >gi|256377888|ref|YP_003101548.1| hypothetical protein Amir_3823 [Actinosynnema mirum DSM 43827] gi|255922191|gb|ACU37702.1| protein of unknown function UPF0118 [Actinosynnema mirum DSM 43827] Length = 390 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 103/316 (32%), Gaps = 17/316 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ +++ L+ + PVL L+I WP +K A I + + + Sbjct: 38 LLGLLIGKLWVV---VMPVLLGLLITTVLWPPARWLRAK-GLPPALAASIVLLLGLGVLG 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ A + +W+S P L Sbjct: 94 GMIALISSSIASGADDIAD---SATEALGQARQWVSGPP--------LNLGDGQFDGLIQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L+ + + G + ++ + ++ FFF +DG L +L Sbjct: 143 KGVQQLQASIGSIANSLLTGVGTVT-SGVVTGLVALLLAFFFVKDGPRFIPWLRALVGER 201 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V + I+++ + +++G GVP V L +T + IP Sbjct: 202 AGGHLAIVLDRVWGTLGDFIRTQAIVSLFDAVLIGLGLVFLGVPLAVPLAALTFLGGFIP 261 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 GA I+ + L+ A + + I L+P L +KL Sbjct: 262 IVGAFIAGAMAVLVALVSNGFTAAVIMLVVVVAVQQIEGNVLQPILQSRSLKLHAAVVLL 321 Query: 315 GLVGGVRTMGLLGLFI 330 + G G+ G F+ Sbjct: 322 AVTAGSSLYGIAGAFL 337 >gi|297544522|ref|YP_003676824.1| protein of unknown function UPF0118 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842297|gb|ADH60813.1| protein of unknown function UPF0118 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 341 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 128/349 (36%), Gaps = 20/349 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKEESS 59 + + + F+I+ ++ L F +P A ++ + P F + K S+ Sbjct: 2 QVKKIYLFFLIIAAIGLLYFFIKNWVSIKNILSPFFIAGLVAYLLNP-MVKFFNSKGLST 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F ++ + V ++ ++F + EM ++ + + L +I + Sbjct: 61 FFSILLVFLIVTLGILIFSFYIFPLMINEMIAFITMIPFYIEE-------LQNILIQLKF 113 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L T A + + L + I + I F+F + Sbjct: 114 NYFSYLPPQFEKVLDKNLNTLNNLFASR--VDMAFKSTVAILKNVIDAILVPIITFYFLK 171 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++++ + + + + + R + K++ ++I G++ L + Sbjct: 172 DKNLFKKEIEKIIPSKYHSSFFTLLRKIDKILSKYIRAQIYLSIFVGILTSIGLSLIKIK 231 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G++T ++ +IP PI ++ L ++ + + I + + P Sbjct: 232 YAFLVGLLTGVLNIIPYIGPILSIIPAVLLGFLDSLSKGIWALVVCLLVQQIENAFITPK 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A++ + E + Sbjct: 292 ILSDSVGLHPITVIFSLIAGGELFGIWGLLLSVPIVAIVKAVVTEIFIE 340 >gi|311069610|ref|YP_003974533.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] gi|310870127|gb|ADP33602.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] Length = 388 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 116/333 (34%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK P++ I+ + PI +K + + ++ + + + I Sbjct: 42 FIFTPIIVLLKTISLPIILTGIVFYLLNPIVDFLERRKVKRIYSILLLYILIIGLITITI 101 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ L+ + V + + G + ++ + L Sbjct: 102 VSIIPF-LKEQIMSLIDNLPRYVDI---VEDQTAQLIGSDFVNQAQQTMNINISDLANKV 157 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + G I + +SII + LF+ +DG + + Sbjct: 158 SDQAATIVNSTFTGVGNFIGAIT-EIVISIITVPFILFYLLKDGKKLPVYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L +I A +++P Sbjct: 217 EQTFTVLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAIIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + I I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A++ VI K Sbjct: 337 TAGKLFGVVGIILAIPGYAVVKVITTHLFDWFK 369 >gi|291441522|ref|ZP_06580912.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291344417|gb|EFE71373.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 371 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 119/349 (34%), Gaps = 17/349 (4%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + V L+ + P++ AL++ +WP+ + F+ ++ + A + TV Sbjct: 25 LLVLVMAAVVLWVVGWMWPVVWPLVVALLLTTLTWPL-ARFLRRRGVAPALAASVVTVLF 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + EL VV + WA+ Sbjct: 84 LLVAAGTVALIAVPVASQSGELADGVVEGIRRL------------REWAAGPPLNIDDDQ 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T + I A ++ + + +FFF +DG L Sbjct: 132 IAHAFDAATARIQDSAGSIANTAVTGVSTVFSGVVTAVLALFLMFFFLKDGPRFLPWLGR 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + ++ + + + +G WL VP + L V+T + Sbjct: 192 QLPGRLATDIPTVAARCWDSLGAFVRSQALVGLLDAVGVGLGLWLLDVPLVLPLAVLTFV 251 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + NA + + + +P + + L Sbjct: 252 AAFVPIVGALFAGFVAVLIALVSNGLTNALLVLAVIIVVQQLEGNVFQPIIQSRGLGLHA 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+ G F+ + LIAVIW + + + + Sbjct: 312 AVVLLAVTLGGSLAGIAGSFLAVPVAGLIAVIWNYVREQLSDPPQDPGA 360 >gi|152964487|ref|YP_001360271.1| hypothetical protein Krad_0518 [Kineococcus radiotolerans SRS30216] gi|151359004|gb|ABS02007.1| protein of unknown function UPF0118 [Kineococcus radiotolerans SRS30216] Length = 397 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 110/347 (31%), Gaps = 33/347 (9%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLS---ALIIGFTSWPIYSSFISKK--EESSTFL--- 62 + ++ + LY + + A +P+ + + + Sbjct: 32 LTAIGLLLATALVLYIVLQTLQVLTWIVVAAFFAIALYPVVGWVERRLLGGKRRSLATLL 91 Query: 63 ----AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 V+ + LF+VPL ++ +L+ P G Sbjct: 92 VFVVIVLVLAGIGTLFVVPLAQEGTKFAGQLPQLIDDARAG------------RGPVGNL 139 Query: 119 ASELWT-KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 ++ Q T L T + A+ + L+ + ++ Sbjct: 140 LERTGALTYVQDNQDRIRSFATGLTTPAAGVLSGVATSAAGAASIFVLAFLMVL------ 193 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +G + +L + + K + G +I+ G++ + +AG Sbjct: 194 --EGPKVVDGFVNLFHAPTAHRLRSVGADCAKSVTGYLSGNLLISAICGVLTYAVLKIAG 251 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP + + AI +IP V++ + ++ + ++ + + + L+ Sbjct: 252 VPFAGLIALFVAIADLIPLVGATIGAVVAVVAGLVHSVPAGIAVLVFFLVYQQLENHLLQ 311 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P + +KL L ++ V G+LG + + ++ V+ ++ Sbjct: 312 PLIFSRTVKLNPLTVIVAILLSVELAGILGALLAIPVASIAQVVVRD 358 >gi|332035801|gb|EGI72286.1| putative permease PerM [Pseudoalteromonas haloplanktis ANT/505] Length = 358 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 121/355 (34%), Gaps = 14/355 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P ++ + LYF PVL AL+I + WP+ + + +I Sbjct: 15 DPHSSTLLFLLLASVALLYFFGSLIVPVLVALVIAYLLDWPVVH--LERVGLKRFSATII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + +L + + LV + + G L + + + E Sbjct: 73 VMLIFISIMLTLILVIGPVLWKQTSNLVQETPHMLEQGKSYLIALPEQYPSLISIEQVQA 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ ++ I + F+ + + + ++ + + +FF +D ++ Sbjct: 133 IVATVEAKIIEF--------GQAVLSFSLTSLKDVVAWLIYLVLVPLLVFFMLKDKLELT 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ + + I + G + G V A+ + + LG Sbjct: 185 GSIAKLIPQQRRLIL-QVWHEMNQQIMNYIRGKVFEILIVGGVSFIAFTVLDLRYAALLG 243 Query: 246 VITAIMAMIPG-GAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA + ++ L G + + I + L P L Sbjct: 244 VLVGLSVLIPFIGAALVTIPVAAVALFQFGLETQFLDILIIYGIIQALDGNVLVPLLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L +L+ + +E +++S Sbjct: 304 AVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALITAWSSTHEEISKELSE 358 >gi|310659285|ref|YP_003937006.1| hypothetical protein CLOST_1981 [Clostridium sticklandii DSM 519] gi|308826063|emb|CBH22101.1| conserved membrane protein of unknown function [Clostridium sticklandii] Length = 389 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 124/353 (35%), Gaps = 14/353 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST---------FLAVIA 66 ++ +I + L F + A I+ I + E+S+ ++ I+ Sbjct: 31 VLSVIGYVVSLLTPFIVGLCIAFILNVIMRLIEDFLKKRLEQSTNTKNPSKIEKWIRPIS 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-----WLSDIPGGMWASE 121 + + L + + L + + E K V V + + L+ +P + + Sbjct: 91 LLLSLSLVVAMVWILLFLIVPEFKNTVEIVSKEFPDFMKKIQNWLGGILASLPFEINSIA 150 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + S L++ L ++F I L Sbjct: 151 FSDLNWEKIGQWISQFLSRGSSALFNTTIGITSSIFSALLNFVLGLVFAIYVLLQKETLS 210 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + I+++ + S G + A+ G++ + +P Sbjct: 211 KQFKKLLYAYLPENIVIEILDIAKLSNGIFSSFVTGQFLEAVIIGVLCFIGMLILRLPYA 270 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + + A+IP T V ++L++ + A ++ + + + P +V Sbjct: 271 LVVSALVGFTALIPVFGAFIGTIVGVFLILMVSPIKALWFVIFFLVLQQLEGNLIYPKVV 330 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GG I LP + + G G+LG+ +G L +++ + ++S+ KE Sbjct: 331 GGSIGLPSIWVLVAVTLGGSAYGVLGMLLGVPLSSVLYSLLRKSVHKRLAKKE 383 >gi|297626877|ref|YP_003688640.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922642|emb|CBL57219.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 476 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 93/271 (34%), Gaps = 10/271 (3%) Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ L G + A + WL P + + Sbjct: 127 VVIIGGLLTLVGAQIGTQWRQLGEQAGKGVQAFITWLGTGPLHISQ--------DQMNNW 178 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + T L+T I A+ G + + + A FFF ++G ++ + Sbjct: 179 LSQARTHLETQQNQ-IVSVATAAGSGVGKFFAGLAMALFATFFFLKNGGHYARSIIGTLP 237 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + ++A +G+ G + G +A+ +T + A Sbjct: 238 RANRIAAQGPLKSGWHALVNYVRAAVVVAAVDGVGAGVGALILGSNLWMAIMALTFVCAF 297 Query: 254 IPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P + AV++ + L+ + A + L + L+P L+G +++P L Sbjct: 298 VPLIGALFSGAVAVAVTLVTLGFWKAVIMLAVFVAVLQLEAHILQPLLLGRAVQIPPLVV 357 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G+ G++G ++A I + Sbjct: 358 LVGIAVGMTLSGVVGGIFAIPIVAFATGIIR 388 >gi|225017521|ref|ZP_03706713.1| hypothetical protein CLOSTMETH_01448 [Clostridium methylpentosum DSM 5476] gi|224949671|gb|EEG30880.1| hypothetical protein CLOSTMETH_01448 [Clostridium methylpentosum DSM 5476] Length = 409 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 109/343 (31%), Gaps = 15/343 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES--------------STFLAVIATVSVMCLFIV 76 P + + + P+ F E + V + F V Sbjct: 46 MMPFMIGFALAYLLNPVMKFFERNLFERAFRNSRLKKKRKLVRGLSVLTTVVVALAAFTV 105 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL L + +++ + ++ G V ++ + ++ I Sbjct: 106 VLLLLIPQLAYSLMGILNNLPEYMKNLGNYVEGLVAGNQELANFVDTQMTTINDTIQDFI 165 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T + + D L II + L+ + + + +L Sbjct: 166 ATAMPSITKLLGNVTVGVIGVVNALKDSILGIIISVYVLYAKEQFIAQAKKVIVALTPDS 225 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + R V G I ++ G++ + G+P V + VI + +IP Sbjct: 226 FSKPFISLVRETHGVFGGFISGKIIDSLIIGVLCFIGTSILGMPYAVLVSVIVGVFNVIP 285 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S L++ + ++ + L P+++GG L F Sbjct: 286 FFGPFIGAIPSALLILMVDPLKCLWFVIFIIVLQQFDGNILGPYILGGTTGLSAFWVIFA 345 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++ G +G+F+G + A+I + I E K + ++ Sbjct: 346 ILTFGGLFGFIGMFVGVPVFAVIYTLISRGINKKLEKKGRSTA 388 >gi|313681012|ref|YP_004058751.1| hypothetical protein Ocepr_2128 [Oceanithermus profundus DSM 14977] gi|313153727|gb|ADR37578.1| protein of unknown function UPF0118 [Oceanithermus profundus DSM 14977] Length = 366 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 106/333 (31%), Gaps = 14/333 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + L A + + + P+ S ++ + V LF V L + Sbjct: 37 WVGFLIAYTLAYLADPLVSGLERRRVRR-----AFGVLLVYALFFVFLGLASVLLAEVVV 91 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI- 149 +L + P+ W+ +P + + + + L+ + Sbjct: 92 QLSQLSERIPEVLRPINGWIEGLPALVRRWAETPEVQAVLVHTADALKALLQGFSATLVK 151 Query: 150 --------PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + ++ + + + D ++ L + Sbjct: 152 GLGALLGQGGNLVAGLAALAGGLVQLLAVFVVTGYLMVDFPRVNAALLEALPRPWQPLAV 211 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + + + G ++A GL +G L GVP ALG I + ++P + Sbjct: 212 ELAGRLDRAVGGYIRGQLLVAALVGLAVGLGLALIGVPMAAALGFIAGVFNLVPYLGVVV 271 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L + + + + I + P+++G L + ++ G Sbjct: 272 SIVPALLLALTVAAWKVVGVLVVFLIANQLESHLFSPYILGRATALHPITVVLSILAGAG 331 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G + +A V++ + + + +++ Sbjct: 332 LFGLWGAMLAVPTVAFAKVLYTDYYLPSRCHEQ 364 >gi|115375072|ref|ZP_01462341.1| hypothetical integral membrane protein in upfo118 [Stigmatella aurantiaca DW4/3-1] gi|310825428|ref|YP_003957786.1| hypothetical protein STAUR_8204 [Stigmatella aurantiaca DW4/3-1] gi|115367910|gb|EAU66876.1| hypothetical integral membrane protein in upfo118 [Stigmatella aurantiaca DW4/3-1] gi|309398500|gb|ADO75959.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 375 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 103/304 (33%), Gaps = 9/304 (2%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + +K + +S + L + L M + + L++++ + + Sbjct: 75 LLERKGLRRGLAIAVVMISGLALVGGLGMLLIPAAMTQGEALLTQL-------PTLMEEV 127 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 SE + + ++ G + G + ++ + Sbjct: 128 RSFRLFRMLSEHFGALMQFGGTVAATGAAPSPPTGTLSLTPLLEAIG-GAVSMMGGVVTI 186 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + F G + + L ++++ V + G+++I + Sbjct: 187 FFLVVFMLAFGKGMPRWLMEQLPAAHRQRYERVMLKVYQATGGYLSGLSLICTINATLTT 246 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIEL 289 + + G+P + LG+++ +M+P P+ L + G F + ++ I Sbjct: 247 TVLAVLGLPFFLPLGIVSGFSSMVPYAGPVVAGGFITLLTWVTGGWFKGMVVLVYFLIYG 306 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L P + + + L T ++ V G++G + ++A + +I +E + Sbjct: 307 QLEGNVLAPLVFRRTVHVNPLLTLLAVLFCVELAGIIGAMVAVPVVATVQIIVRELLQLR 366 Query: 350 KENK 353 +E Sbjct: 367 QERN 370 >gi|302874704|ref|YP_003843337.1| hypothetical protein Clocel_1829 [Clostridium cellulovorans 743B] gi|307690683|ref|ZP_07633129.1| hypothetical protein Ccel74_21186 [Clostridium cellulovorans 743B] gi|302577561|gb|ADL51573.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 342 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 118/331 (35%), Gaps = 13/331 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I+L F + A I+ + PI+ S S+ + A + ++ Sbjct: 19 TIFTIILLFYFKFTRDVIFVFFMAFILSYFLKPIHLSI-SRNGKYKRLCAGVLVLTFFSA 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I ++FL + E +V + + ++ + + + G + ++ Sbjct: 78 IIFVIMFLLPLIVRESNNIVGTLAVMEKYIQQINSKMESMRGNKLVQSVII-------NI 130 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 SE ++KT G + + L + I +++ D I ++L + Sbjct: 131 SSNSENYIKTQGEKIV-----NLLIKLGHSSLEYSIVPIVVYYILADSELIFKRLTMMIS 185 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +K+I + +++ + I+ ++ + + L +I + Sbjct: 186 PNYRKVYKEIFSDIDRILSKYIICQFILCSIIAILTFIVLAIFHIKYPFLLALINGFFNI 245 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP PI +I + + + ++ + I + P + G + L + Sbjct: 246 IPYFGPIIGAIPAILVAALQSHNKVIYVAIFLYLIQQIEGDLISPKITGEFVDLHPMVVL 305 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G + G +G+ + ++ +++++ Sbjct: 306 LLIIIGGKVGGFIGMVLAVPAGVILKILYED 336 >gi|159043294|ref|YP_001532088.1| hypothetical protein Dshi_0742 [Dinoroseobacter shibae DFL 12] gi|157911054|gb|ABV92487.1| protein of unknown function UPF0118 [Dinoroseobacter shibae DFL 12] Length = 361 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 117/325 (36%), Gaps = 18/325 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + I + P+ + S T I + + +FI+ L + + + Sbjct: 30 ILPFVVGGAIAYFLDPVADRLEA-MGLSRTISTAIIALVAVFVFIIAALLIIPTLIQQTI 88 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPG--GMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L G +P+ LS + L + +SL L E +G Sbjct: 89 AL----------GEAIPQILSQLQAFLSERFPSLNDPESTIRESLATLGEMIRSRSGELV 138 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 FAS G ++ + II + F+ D ++ ++D L A +K++ V Sbjct: 139 NKVFASALG--VINAVIFIIVCPVVAFYLLLDWDNMVARIDDLLPLDHKATIRKLAGEVD 196 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V+ G + + G A L G+ + +G + ++ IP + +SI Sbjct: 197 GVMAGFVRGQLTVCLILGTFYSIALMLVGLQFGLVVGAVAGLLTFIPYVGSLVGGTLSIG 256 Query: 269 LLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L I G+ + L + I L P LVG + L + F L G Sbjct: 257 LAIFQFWGDPGWIVAVALIFILGQMIEGNYLTPKLVGDSVGLHPVWLLFALSAFGTAFGF 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 +G+ + + A+I V+ + +I + Sbjct: 317 VGMLVAVPVSAMIGVLVRFAIGQYR 341 >gi|239933176|ref|ZP_04690129.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 367 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 119/349 (34%), Gaps = 17/349 (4%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + V L+ + P++ AL++ +WP+ + F+ ++ + A + TV Sbjct: 21 LLVLVMAAVVLWVVGWMWPVVWPLVVALLLTTLTWPL-ARFLRRRGVAPALAASVVTVLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + EL VV + WA+ Sbjct: 80 LLVAAGTVALIAVPVASQSGELADGVVEGIRRL------------REWAAGPPLNIDDDQ 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T + I A ++ + + +FFF +DG L Sbjct: 128 IAHAFDAATARIQDSAGSIANTAVTGVSTVFSGVVTAVLALFLMFFFLKDGPRFLPWLGR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + ++ + + + +G WL VP + L V+T + Sbjct: 188 QLPGRLATDIPTVAARCWDSLGAFVRSQALVGLLDAVGVGLGLWLLDVPLVLPLAVLTFV 247 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P GA + + L+ + NA + + + +P + + L Sbjct: 248 AAFVPIVGALFAGFVAVLIALVSNGLTNALLVLAVIIVVQQLEGNVFQPIIQSRGLGLHA 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+ G F+ + LIAVIW + + + + Sbjct: 308 AVVLLAVTLGGSLAGIAGSFLAVPVAGLIAVIWNYVREQLSDPPQDPGA 356 >gi|194364749|ref|YP_002027359.1| hypothetical protein Smal_0971 [Stenotrophomonas maltophilia R551-3] gi|194347553|gb|ACF50676.1| protein of unknown function UPF0118 [Stenotrophomonas maltophilia R551-3] Length = 389 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 130/348 (37%), Gaps = 16/348 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I ++ L P + AL + + P+ + V+ + Sbjct: 19 ILFAGLIGWIVWLLAPILTPFVLALALAWLGDPLVDRIEATGRSR--------MTGVVLV 70 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQ 131 F +L + ++ + + ++ WL IP + L P Sbjct: 71 FAAMVLVIVALLLVLVPMIERQITTLIAVAPQAQAWLMEKGIPWFEQKTGLEVMQWMDPD 130 Query: 132 SLKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + G + SR G + + ++I+ + I F+F RD + +++ Sbjct: 131 RLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ ++R +V+ + G ++ + G++ L G+ + +G+I Sbjct: 191 SVIPRNQIGTISALARESNEVLGAFIRGQFLVMLALGVIYAGGLSLVGLKLGLLIGLIAG 250 Query: 250 IMAMIP---GGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +++ IP I V+ + +G ++ + + + + L P +VG I Sbjct: 251 LISFIPYLGATTGILMAIVAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ + + A+ V+ + + ++++ Sbjct: 311 GLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSE 358 >gi|315613038|ref|ZP_07887949.1| membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315148|gb|EFU63189.1| membrane protein [Streptococcus sanguinis ATCC 49296] Length = 369 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 113/339 (33%), Gaps = 10/339 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + P+ + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPVVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + L D+ + + ++ ++ Sbjct: 89 VVYLLPILINQLTSLIISSQN-------IYSRLQDLIIDLSMNPVFQNIDIQKTIQQLNL 141 Query: 138 ETF-LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + N ++ + L +I + L +F DG + L+ Sbjct: 142 SYVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTVLKHD 201 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 202 KLNLSSLLTNLNTTIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPY 261 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G I + I + + + I I L P +VGG +K+ + Sbjct: 262 VGPSIGLIPMVIANVFT-DPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ G++G+ + ++ I K + +KE Sbjct: 321 LLLSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|218135102|ref|ZP_03463906.1| hypothetical protein BACPEC_03007 [Bacteroides pectinophilus ATCC 43243] gi|217990487|gb|EEC56498.1| hypothetical protein BACPEC_03007 [Bacteroides pectinophilus ATCC 43243] Length = 442 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 113/333 (33%), Gaps = 21/333 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYS-------SFISKKEESSTFLA----VIATVSVMCLF 74 ++ F + ++ + PI I K ++ I V + LF Sbjct: 76 IMQPFIIGI----VLAYIVNPIMMVVEGIVMRLIGPKVKNPKTAEKTARGIGIVCALMLF 131 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGG--MWASELWTKHLSHPQ 131 I+ ++FL + ++ V VV + I W++++ G ++ + +S Sbjct: 132 ILIIVFLLELIIPQIISSVQGVVGSLPDEISSFVAWVTEVTRGNEQISNMVEKGIISGTD 191 Query: 132 SLKILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L +I + I ++ + II + L R + + Sbjct: 192 FIGKWVQDHLLPQANTYIVSITTGVVNVARIVVNVFVGIIISVYVLASKERFIGQSKKMI 251 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + +R ++ +G I ++ G++ + +P + VI Sbjct: 252 YTMFDAKRGNIIIRTARKSNEIFGGFIMGKIIDSLIIGVLCYVGLLILRMPYPTLVSVIV 311 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P S ++ N ++ + + + P ++G L Sbjct: 312 GVTNVIPFFGPYIGAVPSFIIITLANPIKGLYFLVFILVLQQLDGNVIGPKILGDSTGLS 371 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F ++ G G+ +G A+I I Sbjct: 372 PFWVVFAIIAAGGIFGFAGMLLGVPTFAVIYYI 404 >gi|160881610|ref|YP_001560578.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] gi|160430276|gb|ABX43839.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] Length = 374 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 114/321 (35%), Gaps = 6/321 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L FF P + A I+ + P+ + + + + I + V+ L L + Sbjct: 32 LLAFFLPFVVAYILSLIANPLVKFMEKRIKIARKHGSAIIIILVLALIFGLLYLVLSILF 91 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ L++ + Q +S L + +L ++ L Sbjct: 92 REIYSLITDLPNIAQQIAESIEGIST-KFASLYEALPQGLKTFLDNLNTSAQGSLDKLLS 150 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMII---ALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + G + + ++ MII A +FF D I + + + + I Sbjct: 151 GVDLTSVIKAGGVVSTFTNTVFMMIITILATYFFIVDRDKIIAAANKILPESIKRFNRII 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 S + F I I +V+ + G+ + L + A++ +P G + F Sbjct: 211 SDNFKTAVGGYFKAQFKIMIILTVVMFITFEFMGINYSILLALTIAVIDFLPVLGTGLVF 270 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ I N A + + + I+ + L+P +VG I + T + G + Sbjct: 271 WPWAVISFINENYVEAIVILVLY-LACQIIKQVLQPKMVGDSIGINPFQTLLFMFIGYKL 329 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 G+ G+ G + ++ +++ Sbjct: 330 YGIGGMIFGIPIGMVLVSLYR 350 >gi|86146847|ref|ZP_01065166.1| permease PerM [Vibrio sp. MED222] gi|218710275|ref|YP_002417896.1| putative permease perM [Vibrio splendidus LGP32] gi|85835299|gb|EAQ53438.1| permease PerM [Vibrio sp. MED222] gi|218323294|emb|CAV19471.1| putative permease perM [Vibrio splendidus LGP32] Length = 358 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 117/352 (33%), Gaps = 14/352 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + + T ++ Sbjct: 15 DPHAVSLVAIILFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LQRLGVPRTPSVML 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++ L L ++ L++ + + ++++ IP Sbjct: 73 VILMFFSVMLLALFGLVPTIWEQVGNLINDIPSMYGG---LQKFIATIPERYPELANLQI 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K + F ++ + S + +I + + +FF +D + Sbjct: 130 VESIVSNAKNKALGFGESVVKGSLASLVS-----LATLAVYLILVPLLIFFLLKDKEEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + + I + G + + G V + + + L Sbjct: 185 SMASGVLPK-NRRLATKVWVEMNQQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA V+I L G L L I + L P L Sbjct: 244 VAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLEPQFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ +W ++ + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHALDDDPE 355 >gi|331266508|ref|YP_004326138.1| hypothetical protein SOR_1140 [Streptococcus oralis Uo5] gi|326683180|emb|CBZ00798.1| conserved hypothetical protein [Streptococcus oralis Uo5] Length = 369 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 114/338 (33%), Gaps = 8/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + PI + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L ++ + + + D+ + + +L + Sbjct: 89 VVYLLPILINQLTSL---IISSQNIYSRLQDLIIDLSMNPVFQNIDIQQTIQQLNLSYVD 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 146 ---ILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I + I + + + I I L P +VGG +K+ + L Sbjct: 263 GPSIGLIPMVIANVFT-DPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLL 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G++G+ + ++ I K + +KE Sbjct: 322 LLSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|295098778|emb|CBK87867.1| Predicted permease [Eubacterium cylindroides T2-87] Length = 386 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 121/333 (36%), Gaps = 14/333 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESST--------FLAVIATVSVMCLFIVPLLFLFYYG 85 ++ +I + + + E+S ++++A++ + L I +L + Sbjct: 44 LVFGGMIAYVLNLVMNRIEKLLEKSKNKFVLKIKRVISLLASLCCVALIIYFVLAIVIPT 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + +++ V+ Q+ ++LS++ L I NG Sbjct: 104 LGQAGQVLIDVLP--QYFNDTIKFLSNLFENNPHIVEMINGLEINWKEMIDQTLSFLGNG 161 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK--- 202 + + I ++ + I II + D + LG+ K Sbjct: 162 LGNVLGSTFNMVNIVVNSVFNTILSIIFAIYVLLDKERFIRLYHRLGDLYLGKDRKDKLT 221 Query: 203 -ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I+ + S G I A G + + +L +P + +GV+ ++ +IP Sbjct: 222 SALKIINQSFGSFIGGQCIEATILGTLCATGMYLLNMPYPLMIGVLVGLINIIPMIGAYI 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A+ ++++ + + ++ I + P +VG + LP + +V Sbjct: 282 GGAIGMFMVFTVDPMMSLGFLVYLCILQQFESNVIYPRVVGSSVGLPGIYVMMTVVVFGS 341 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+F+G +A I + K I ++ E Sbjct: 342 LAGIPGMFLGIPTVASIYKLAKIHIQNKEKELE 374 >gi|55378831|ref|YP_136681.1| hypothetical protein rrnAC2127 [Haloarcula marismortui ATCC 43049] gi|55231556|gb|AAV46975.1| unknown [Haloarcula marismortui ATCC 43049] Length = 236 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 89/216 (41%), Gaps = 2/216 (0%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + A L + I ++ + + + + ++ Sbjct: 21 AARETLTAVAVDLAAESPVLALKAVLFSILVYAMLWRPQAPKKAVYRTVPASYHEVVNRL 80 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + + + + ++ A G +V +WL G AL V+ I+ +P G + Sbjct: 81 HQRLRGTLYAIYVLQAATAFGTFVVAWVVFWLLGYQGAFALAVVAGILQFVPVIGPSVVV 140 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +++ +I GNI A + ++G + + F+ D +RP L LP F G GGV Sbjct: 141 LTIAVADIINGNITGAVLVTVFGLVFVGFLPDAVIRPKLARYTTGLPASLYFVGFTGGVL 200 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 T+G++G GPV++AL+ + + ++++++ Sbjct: 201 TLGVIGFIAGPVVIALLVELSSLLTSERQGDQQRLT 236 >gi|163788240|ref|ZP_02182686.1| hypothetical protein FBALC1_07663 [Flavobacteriales bacterium ALC-1] gi|159876560|gb|EDP70618.1| hypothetical protein FBALC1_07663 [Flavobacteriales bacterium ALC-1] Length = 362 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 121/346 (34%), Gaps = 18/346 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + L LY ++ + A +I PI K + ++T V+ V ++ L Sbjct: 17 LLAVALALFFLYKIQSVIVYIAVAAVISLIGRPIVIFLRRKLKFNNTVAVVVTMVLLIGL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + + L + + + S++ + + Sbjct: 77 LVGLVGLFIPLIVEQGHNL---------SLLNIEQLQSNVENLYDQIVTYFEFQKIDVEQ 127 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I L IP F + F + + + ++ FFF +D + + Sbjct: 128 SIKDSNLLSKLDFAVIPNFLNSFISGLGSFSIGLFSVLFISFFFLKDSKLFEDGIMTFIP 187 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K+ + ++ F+G+ + ++ + G+ + + + + A++ + Sbjct: 188 KGNEMRSKRSFTKIKDLLSRYFVGLIFQILILFVIYTIVLLIFGIDNAIVIAFLCALLNL 247 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNA--------TCLFLWGAIELFIVDKTL-RPFLVGGP 304 +P P+ + + L + N+ + T + G + +VD +P++ Sbjct: 248 VPYVGPLVSGFLMLLLSMSSNLGESFSDVILPKTTYIMIGFVIAQLVDNFFSQPYIFSKS 307 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +K L F ++ G++G+ + I VI KE + K Sbjct: 308 VKSHPLEIFLVIIIAGILFGIIGMIVAIPAYTAIKVILKEFLSEYK 353 >gi|253579961|ref|ZP_04857229.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848960|gb|EES76922.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 382 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 128/350 (36%), Gaps = 14/350 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---------TFLAVIATVS 69 I++ ++ L GF P + I F + ++ V Sbjct: 30 IVISTVRVLLGFLFPFIIGFGIAFILNIPMKFIEHHLFGKALKQEKKTAQKLARPVSLVL 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWASELWTKHLS 128 +C I ++ + + E+ + + IPV +W+ ++ G W + L Sbjct: 90 SICFVICIIVIVMLVVVPELGATFVNIAKKIEENIPVFQKWIDNVFGNNPEVVKWAQSLD 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + NG++ I M L +++ + + + QQ+ Sbjct: 150 IEPGKIIDSVLGVLKNGVNNIVSSTVSITMGLLTTAMNVSIGFVFACYVLLQKEKLLQQI 209 Query: 189 DSLGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +FP Y + + ++ + G I A+ G + + + P + + Sbjct: 210 KKAMYAMFPEKPVRYLAHVWNLANRIFSNFITGQCIEAVILGSMFFVSMTILHFPYAMLV 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ + A+IP I V+ +L++ + A I I + P +VGG Sbjct: 270 GVLISFTALIPLFGGIIGCWVAFFLILMISPVKAVLFLGLFLILQQIEGNLIYPHVVGGS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + LP + + G MG+ G+ I +++I +++E + A E K+ Sbjct: 330 VGLPSIWVLVAVTLGGSLMGIAGMLIFIPTVSVIYTLFREWVYARLEKKQ 379 >gi|289178270|gb|ADC85516.1| Permease [Bifidobacterium animalis subsp. lactis BB-12] Length = 539 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 97/319 (30%), Gaps = 15/319 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ AL + P+ I +V ++ + IV + + +M +V Sbjct: 69 IVIALFLALAVEPLVIRLIRH-GWKRGVASVTCLAGLLVIVIVLMALFGNMFVQQMISMV 127 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + L L +K + + A Sbjct: 128 KGLPDLYNQFAAFVDAKTHFK------------LPEMNDLGGEIMKNIKGSWVTDFAGQA 175 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 M L L++ ++ F+ G + + + + + +V I Sbjct: 176 VSTTMGVLGQILNLTTALMVAFYISIAGPKLRRSVCQWIAPRSQRRFLMVWTVVQDQISG 235 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLI 271 +I+A + + VP + L + I++ +P G I ++ Sbjct: 236 FLFSRSILAAINAACMSVFLMIIKVPYWLPLALFCGIVSQFVPTLGTYIGGALPVLFAWG 295 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + I A + ++ + I + L P + + L F ++ G G F+ Sbjct: 296 ERGIGYAIGVVVFITVYQQIENLVLSPKISERTMDLNPCIAFLTVLFFGSIFGAAGAFLA 355 Query: 332 PVLMALIAVIWKESIMAIK 350 + A I V+ K ++ Sbjct: 356 LPITASIQVLLKVAMKRYP 374 >gi|295105497|emb|CBL03041.1| Predicted permease [Faecalibacterium prausnitzii SL3/3] Length = 420 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 115/347 (33%), Gaps = 16/347 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPI-------YSSFISKKEES--STFLAVIATVSVMCLFIVP 77 L G P + +I + P+ FI +K + + + + L Sbjct: 45 LTGILMPFIYGAVIAYLLKPVCNSIENFLRRFIPEKMNGLINALSVALTILFGLLLVYAL 104 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + + L + L I +EL + + Sbjct: 105 VMMIVPQLITSVTTLYYTAQANITKFMNWANHLEFIEKNEQITELLNSAYAALNTNLDTW 164 Query: 138 ETFLKTN---GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ----LDS 190 T+LK + I A+ + + ++I II + QQ L S Sbjct: 165 NTWLKNTLLPSMQNIVSGAAIGVLNVVTVAKNLIIGIIVAVYMLASRKRFVQQGKLVLHS 224 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + ++ G + + G++ + PS + + VI + Sbjct: 225 IVRPRWAQLITEEVKYADRMFGGFINGKIMDSAIIGVLCYIGCLIFKFPSALLVSVIIGV 284 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP P + L++ + A L+ + + + P ++G L Sbjct: 285 TNVIPFFGPFIGAIPATLLILIQSPIKALWFVLFVLVLQQLDGNIIGPKILGNTTGLSSF 344 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G+ +G L A+I + K+ ++ + ++++ Sbjct: 345 WVLFAILLFGGLWGFVGMIVGVPLFAVIYDVIKKLVIHGLQRHQELT 391 >gi|220934002|ref|YP_002512901.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. HL-EbGR7] gi|219995312|gb|ACL71914.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. HL-EbGR7] Length = 358 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 118/347 (34%), Gaps = 14/347 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ ++ +++ + F AP+L++LI + AVI Sbjct: 15 DPQVVILALLLIFGTAVVVFAGRLIAPLLASLIFAYLLDGAVQKLQRWHMPR--LAAVIL 72 Query: 67 TVSVMC-LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V LFI+ LL L ++ +LV ++ G V L + + E Sbjct: 73 VFVVFVTLFIITLLGLIPLLSQQVTQLVRELPAMIAQGQYVLMELPERYPQFISEEQVRD 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ T + + M + + + +I + + +FF +D +I Sbjct: 133 LIVAIRAEA--------TLLGQRMVSLSLSSAMHLVTFLVYLIIVPLMVFFLLKDKEAIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ V I S G I + V + L G+ + L Sbjct: 185 AWITGFLPRDRGL-ASEVWAEVNVKIASYVRGKFIEILIVWAVTYVTFTLFGLNYAMLLS 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA + V++ + + + + + F+ L P L Sbjct: 244 VMVGLSVIIPYIGAAVVTIPVAMVAFFQWGLGSEFVWVLVAYGVIQFLDGNVLVPLLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L + ++ GL G+F L LI + + + Sbjct: 304 VVNLHPVAIIAAVIVFGGLWGLWGVFFAIPLATLIQAVIRSWPRHGE 350 >gi|182678281|ref|YP_001832427.1| hypothetical protein Bind_1297 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634164|gb|ACB94938.1| protein of unknown function UPF0118 [Beijerinckia indica subsp. indica ATCC 9039] Length = 382 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 122/331 (36%), Gaps = 9/331 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P +A+++G+ P+ + + ++ + + L + L+ + ++ Sbjct: 28 ILPFAAAVVLGYLLDPVADHLE-RLGLNRLGATLLILAAFVLLLVAVLILIVPVLGHQLA 86 Query: 91 ELVSK----VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++ L+D G+ +L LS P+ S+ + Sbjct: 87 GFIQSLPEYIIKLQDLISKESDRLTDQYIGVLVGKLGLSRLSGPELAPPTSDMVSQVVQW 146 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMI-IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G L +S++ + + F+ D + ++DSL A ++++ Sbjct: 147 GAGFIKSLWTGGAALVSLISLLVVTPVVAFYMLLDWDKMIAKIDSLIPIRHRATVRELAS 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G +++ + GL G + L G+ + +G+ I++ IP ++ V Sbjct: 207 EIDGAMAGFLRGQSLVCLFLGLWYGIGFTLVGLNFGLLIGISAGILSFIPYVGSLTALVV 266 Query: 266 SIYLLIKGNI-FNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + + G I + F+ L P LVG + L + F L+ Sbjct: 267 GSTVAVVQDWPSWHLLAVTLGVIAVGQFLEGNILSPKLVGESVGLHPVWVMFSLLAFGSL 326 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G GL L A + V+ + ++ +++ Sbjct: 327 FGFTGLLTAVPLAAAMGVVLRFAVKRYRDSP 357 >gi|331701993|ref|YP_004398952.1| hypothetical protein Lbuc_1641 [Lactobacillus buchneri NRRL B-30929] gi|329129336|gb|AEB73889.1| protein of unknown function UPF0118 [Lactobacillus buchneri NRRL B-30929] Length = 369 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 1/166 (0%) Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + LF+ +DG+ ++ + + + I G I + G Sbjct: 188 VVLFYMLKDGYRLAPTIKKFLPERHREQTMDLLGKMSHTISKYISGQMIECLFVGTFTAI 247 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G P + LGVI I +IP G I I G +++ + I Sbjct: 248 GYVIIGTPYALLLGVIAGICNIIPYLGPYIGIAPALIVSFSHGGLWSVVYNIIVVLIVQQ 307 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 I + P ++G +++ L L+ GL+G+ + L A Sbjct: 308 IDGNLVYPNVIGKSLEIHPLTIIIILLAAGNIAGLMGMILAVPLYA 353 >gi|307946764|ref|ZP_07662099.1| ATP/GTP-binding protein [Roseibium sp. TrichSKD4] gi|307770428|gb|EFO29654.1| ATP/GTP-binding protein [Roseibium sp. TrichSKD4] Length = 361 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 109/344 (31%), Gaps = 16/344 (4%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + WMI + + + ++ P ++ + + + P+ + A Sbjct: 1 MTLRRQVQFWMISLGVFIAFMWLFSPVLLPFVAGMAVAYLLDPVCDRLEDLGMKR--LWA 58 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + L + +L + L +++ + + L + L Sbjct: 59 TLTILLSF------IFVLVLFFLLILPVLGNQLAAFLERFPELISQLQGLVSRDLIERLA 112 Query: 124 TKHLSHPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L+ L + + G L + + F+ D Sbjct: 113 AAAGMTGEDLQASFTNLLGQGATWIAKLAQSIWSGGQALLSIISLFVITPVVAFYLLLDW 172 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++DS + ++ + + + G + + GL A + G+ Sbjct: 173 DRMIARIDSWLPRDHVVEIRGLACEMDQAVAGFVRGQVSVCVTLGLFYAIALGVVGLNFG 232 Query: 242 VALGVITAIMAMIPGGAP----ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +G+ +++ IP + V++ + + + F+ L+ Sbjct: 233 LLIGMGAGLVSFIPFVGAGLGFLVSVGVALVQFWP-DWPWVVAVGAVFGVGQFLEGNILQ 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P LVG L + F L G +G+ I A+I V+ Sbjct: 292 PKLVGDSTGLHPVTLMFALFAFGYLFGFVGMLIAIPAAAMIGVL 335 >gi|322411655|gb|EFY02563.1| hypothetical membrane spanning protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 375 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 113/296 (38%), Gaps = 8/296 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + +L++ + + P + + + Sbjct: 80 ICMLLAYLTFFILITWIISIVI---PDLIASISALTKFDTPSIKEVVNQLEHNKLLARVI 136 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 K++ L ++ + FI + + + +++ + + + Sbjct: 137 KYIGGDAKLTQTITSYSQQLLKQFIGVLTNILTSVTVIASAIINLFISFVFSLYVLANKE 196 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ +Q ++L + Y + I ++ F+ T+ A+ G + + +L +P Sbjct: 197 SLCRQGNTLVDTYTGKYAQSIHYLVDLLHHRFHGFFVSQTLEAMILGTLTTTGMFLLQLP 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 257 FAGTIGVLVAFTALIPVVGASIGAAIGFVLIMTQSMSQAIVFIVFLIILQQIEGNFIYPR 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VGG I LP + + G G++G+ I L A + + K++I + ++K Sbjct: 317 VVGGSIGLPAMWVLMAITIGASLRGIVGMIIAVPLAATLYQVIKDNIQRKQAIQKK 372 >gi|153814461|ref|ZP_01967129.1| hypothetical protein RUMTOR_00674 [Ruminococcus torques ATCC 27756] gi|317500174|ref|ZP_07958407.1| hypothetical protein HMPREF1026_00349 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087599|ref|ZP_08336527.1| hypothetical protein HMPREF1025_00110 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848857|gb|EDK25775.1| hypothetical protein RUMTOR_00674 [Ruminococcus torques ATCC 27756] gi|316898463|gb|EFV20501.1| hypothetical protein HMPREF1026_00349 [Lachnospiraceae bacterium 8_1_57FAA] gi|330399778|gb|EGG79438.1| hypothetical protein HMPREF1025_00110 [Lachnospiraceae bacterium 3_1_46FAA] Length = 457 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 117/339 (34%), Gaps = 17/339 (5%) Query: 33 PVLSALIIGFTSWPI-------YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P++ L I + PI F+ KK + ++ +C+ IV L + + Sbjct: 86 PIVYGLAIAYLLNPIVKAVDRKLLPFLEKKFPNFKQAKSVSRSVGICISIVILATIIFTL 145 Query: 86 M-LEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSH-PQSLKILSETFLK 142 + + EL + + + R++ ++ + + + + +++ Sbjct: 146 FNMMIPELYKSIRDMIMNVPSQMNRFIRELSEMNTENSTIGNIVESVMKEATTFVQNWMR 205 Query: 143 TNGIDFIPRFASRFGMIFLDY-------CLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T+ + I F S + L++ + +I + LF + + ++ + Sbjct: 206 TDLLGRINDFMSGLTVGVLNFMREIMNILIGLIVSVYVLFSKEKFSKQSKKITYAIFKPS 265 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ ++ +G I + G++ + + +P + + VI + +IP Sbjct: 266 NANMILHLTIKSNEIFGGFIIGKIIDSAIIGVLCFAGLSILNMPYAMLVSVIVGVTNVIP 325 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S L++ ++ L P ++G L F Sbjct: 326 FFGPYIGAIPSAILILLAEPKMGIYFIIFIIALQQFDGNVLGPKILGDSTGLSAFWVVFS 385 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+ G+ +G A++ I + E K+ Sbjct: 386 ILIGGGLFGVPGMILGVPTFAVVYYIVGMLVNNKLEKKK 424 >gi|262276464|ref|ZP_06054273.1| permease PerM [Grimontia hollisae CIP 101886] gi|262220272|gb|EEY71588.1| permease PerM [Grimontia hollisae CIP 101886] Length = 360 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 119/356 (33%), Gaps = 14/356 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++ I V +YF AP+L A+++ + WP+ + + T ++ Sbjct: 15 DPHAVSLIALLVIGFVVIYFFGNLLAPLLVAIVLAYLLEWPVAKMV--RLGLNRTLSVIL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + I+ L L ++ L++ + ++S +P Sbjct: 73 VLLLFVGFMILALFGLMPTIWNQIINLIADIPTMFSG---FQDYVSHLPEAYPELIQPHM 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +++ +T + S + +I + + +FF +D + Sbjct: 130 VNTFIDTVQSRVLGMGETVVKSSLASLVS-----LATLAVYLILVPLLVFFLLKDKEEMM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL K+ + + I + G I G+ + + + V L Sbjct: 185 RSFTSLLPR-NRRLTNKVGVEMNEQISNYIRGKVTEIIIVGITSYITFAILDLRYAVLLS 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGG 303 V T + +IP GA + + L + I L L I + L P L Sbjct: 244 VATGLSVLIPYIGAAAVTLPIFVVALFQWGISPELGYLMLAYGIIQALDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + ++ G G+F L L+ +W + + +N Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSHDPDGEVTAETN 359 >gi|58040354|ref|YP_192318.1| putative permease [Gluconobacter oxydans 621H] gi|58002768|gb|AAW61662.1| Putative permease [Gluconobacter oxydans 621H] Length = 381 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 99/330 (30%), Gaps = 7/330 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + A + ++ ++ + AV V+ L+ LF Sbjct: 42 WLIGDVLAVIFASALVAIVLHGLARMLRRHVSVIPYQGAVALVTVVI------LVALFGL 95 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 G + + + Q I L G ++ HL S L + Sbjct: 96 GWYSGPAISDQFIRLKQALITQSGELRTHLSGSTLGQMVLDHLPSSLGGNAASTASLGSL 155 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G +++ ++IA +F + L +++ Sbjct: 156 GSGLAGSVTGLL-SSVFGILGTLLVVLIAGLYFALSPAVYIDGMLRLVPTQHRPAARELM 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + G + + G++ G L G+P +ALGV + IP I Sbjct: 215 LTAGSTLWAWTAGQALDMLVVGMLSGIGLSLIGIPLALALGVEAGLCNFIPYIGAILGAV 274 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ L + A + + + F L P + + +P +G Sbjct: 275 PAVLLGLSLGTHEALFVGILYCVIQFFEGNVLAPLIQRRAVHMPPALAILSQTVFGSILG 334 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL + + A + + ++ +++ + Sbjct: 335 APGLILASPITAALLAMGDKATAPLEDENQ 364 >gi|84389749|ref|ZP_00991301.1| permease PerM [Vibrio splendidus 12B01] gi|84376850|gb|EAP93724.1| permease PerM [Vibrio splendidus 12B01] Length = 358 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 117/352 (33%), Gaps = 14/352 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + + T ++ Sbjct: 15 DPHAVSLVAIILFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LQRLGIPRTPSVML 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L ++ L L ++ L++ + + ++++ IP Sbjct: 73 VIMMFFSLMLLALFGLVPTIWEQVGNLINDIPSMYGG---LQKFIATIPERYPELANLQI 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K + F ++ + S + +I + + +FF +D + Sbjct: 130 VESIVSNAKNKALGFGESVVKGSLASLVS-----LATLAVYLILVPLLIFFLLKDKEEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + + I + G + + G V + + + L Sbjct: 185 SMASGVLPK-NRRLATKVWVEMNQQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA V+I L G L L I + L P L Sbjct: 244 VAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLEPQFYWLLLAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ +W ++ + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHALDDDPE 355 >gi|307626826|gb|ADN71130.1| putative inner membrane protein [Escherichia coli UM146] Length = 181 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 57/155 (36%), Gaps = 2/155 (1%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + I I+ L+ ++ F A + +WP+ Sbjct: 4 VRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ T+ ++ +FI+P+ L + L+ K + + +P WL+ IP Sbjct: 64 SLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAK 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 +L E+ + R+A Sbjct: 123 LYAGWHNLLDSGGDGDHGESPSLYWHHHHLVRWAG 157 >gi|300312358|ref|YP_003776450.1| hypothetical protein Hsero_3054 [Herbaspirillum seropedicae SmR1] gi|300075143|gb|ADJ64542.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 374 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 134/343 (39%), Gaps = 13/343 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++L Y + ++ A+ + +P+ + IA V V+ + Sbjct: 15 VFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVELIERVRPPRVPRTVSIALVFVLAI 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 IV + + ++ + L ++ + +S +P +A L + L + Sbjct: 75 AIVATVATIFGARIQEEAL--RLSEQLPALLRSNDAVSRLPLPGFAEPLRARILGFVRDQ 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDS 190 G D A +FG+ + ++I+++ + F ++ ++ +++ S Sbjct: 133 L--------AAGTDQAMPLAKQFGVGVMHAASNLIYLVLVPVISFLLIKEAPAMREEMLS 184 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 W I + ++ + +++ + A+ L GVP + L + A+ Sbjct: 185 WMSRANRKLWDGIVTDLDVLLSRYVRALLFLSVATFVAYSIAFSLMGVPYAMLLAGLAAV 244 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP P++ +A ++ + + L + D L P+L+ +++ L Sbjct: 245 LEFIPFAGPLAASAAALVVAGFSAYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVEVSPL 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL+ G + G+ G+F+ +MA + +I+ + A K + Sbjct: 305 MVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARR 347 >gi|227496031|ref|ZP_03926342.1| possible integral membrane protein [Actinomyces urogenitalis DSM 15434] gi|226834424|gb|EEH66807.1| possible integral membrane protein [Actinomyces urogenitalis DSM 15434] Length = 445 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 119/332 (35%), Gaps = 9/332 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ ++ + + + F V AL++ P+ + F +AT + Sbjct: 101 FLVVALVFLGISRIVPVFVGVFIALVVTAILHPLVTFFARVMPRYPATFLALATTAAFLA 160 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +V ++ + L ++ + ++ P + S+ + + Q L Sbjct: 161 ALV--YYVVSSVTDQWSSLAAQFSTGVNT---ILDFVEHGPLPIHFSQ--QEVVQTMQGL 213 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++++N S G + + + + + F G + + + Sbjct: 214 VNQGQRYVESNATSLAGEVLSNAGTVVNVFVV-LALAVFTSIFLLASGGRMWRWFLNELP 272 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + G I+A+ + ++ G + GVP L V+ I A Sbjct: 273 AHLRSRVHRAAGAGWYTFAGYARGTVILALTDAVMAGVFLQVVGVPLAAPLAVLVFIGAF 332 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPT 312 IP V++ + + F A + G + ++ L+P ++G + L + Sbjct: 333 IPMIGAPLAMIVAMVVALASKGFVAMVVVGLGVAGIGQIEGHILQPLIMGRQVSLHPVVV 392 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G + GLLG + L+++ ++ E Sbjct: 393 GIAVAVGTFSAGLLGAVVAVPLVSVAWSVYSE 424 >gi|257869484|ref|ZP_05649137.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803648|gb|EEV32470.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 367 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 122/339 (35%), Gaps = 11/339 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+ F PVL ++ I + P ++ I K+ + + + ++ Sbjct: 29 ILFVFRPLEAIFASVFLPVLISVFIFYIFLPFFN-LIKKRSSNQHLALYVTLLLILFAAY 87 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + EM ++++ P ++ I + S SL I Sbjct: 88 LIIQVIGPALINEMARFINQI----------PYIINRIIDNIDHSSFEELFGPLLDSLDI 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L I + I + + + + L + ++DG + L S Sbjct: 138 NQISNLAAQFITGATNSLTSLVAIVSHSAIVLFTIPLLLVYMFKDGHKVPDLLVSKAPKK 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G ++ + G+ + G+ + + LG+I ++ +IP Sbjct: 198 FRSLILQLCQDFHQAASAYISGKLLVCLYVGVFSYLIFTFLGLQNALLLGLICGVLDIIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + ++ A L + I F + P ++ + + + F Sbjct: 258 YFGPFIGAAPAFLFALSQDMKTAVLLVIGITIIQFGESYVVSPIVMNKVLHIHPIIAVFL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ +G +G+ + + +++ + ++ K Sbjct: 318 LLIAGNLLGFVGMIVALPVYSIVMAMAGTLTRYYQQQKH 356 >gi|258543033|ref|YP_003188466.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256634111|dbj|BAI00087.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256637171|dbj|BAI03140.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256640223|dbj|BAI06185.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256643280|dbj|BAI09235.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256646335|dbj|BAI12283.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256649388|dbj|BAI15329.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256652374|dbj|BAI18308.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655432|dbj|BAI21359.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 381 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 106/338 (31%), Gaps = 7/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I + ++ + V ++++ + + + +V+C I Sbjct: 49 AVIALVVWLMGDVLMVVFASVLCAVVLHGLSKILVRHLRLPYGWA----LSAVICGLIGS 104 Query: 78 LLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +FL + G + E + Q + L P G L Q+ Sbjct: 105 AVFLVWNSGPAMISEALRLQDALRQQETALRSTLQSTPTGQMILNYLPASLGGHQAGGGD 164 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + I + +++ ++IA +F + L Sbjct: 165 TSSL--ASLGSRIAGSMTGILGSAFGAIGTLLVVLIAGLYFAMSPAIYANGFLRLVPVSK 222 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + + + G ++ + G + G W GVP +ALGV+ + IP Sbjct: 223 RPKVRDLLLRAGQTLWAWVAGQSLDMLVVGTLSGLGLWFIGVPLALALGVLAGLCNFIPY 282 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I ++ L + + + ++ F+ L P + +++P T Sbjct: 283 IGAIMGAVPALLLALSLGTRETIMVAVLYSVIQFLEGNVLAPVIQRHAVQMPPAITVLSQ 342 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G GL L A++ + E + Sbjct: 343 TLFGAILGFPGLIFASPLTAVLMATLDGLTPKLDEKDQ 380 >gi|113869032|ref|YP_727521.1| permease [Ralstonia eutropha H16] gi|113527808|emb|CAJ94153.1| predicted permease [Ralstonia eutropha H16] Length = 356 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 105/314 (33%), Gaps = 8/314 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P L A I + P ++ + + + + + ++ +L E Sbjct: 32 PVLTPFLFAFIFAYVLNPGVDWLQRRRVPRA-VGVTLMILLLTVICVMLVLLAIAVLQRE 90 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + ++ ++ + + V P +++ + + + Sbjct: 91 IPQIREQLPILLKKLNSVVS-----PRLAEFGVRIRFDFPGLRNMLSDRFSASPEDLLVV 145 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + G + + + I +F+ D + ++++ + + ++++ Sbjct: 146 LLNYVKMSGSALITVAGIVFIVPIVMFYLMMDWHMVMRRIEGVVPRRWVPKVRELTNETD 205 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 ++ G ++ + + +AG V +GV T + IP ++I Sbjct: 206 ALLSQYLRGQILVMVILAAIYSIGLTIAGFDIGVPVGVFTGLAVFIPYIGFGVGLVMAIL 265 Query: 269 --LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 LL GN + + + FI L P LVG I L L F L+ + G Sbjct: 266 AALLQFGNWYGLAAVAVVYGFGQFIESFYLTPRLVGERIGLHPLVVIFALLAFGQLFGFF 325 Query: 327 GLFIGPVLMALIAV 340 G+ + A++ V Sbjct: 326 GVLLALPTCAVLLV 339 >gi|22125311|ref|NP_668734.1| permease [Yersinia pestis KIM 10] gi|45442464|ref|NP_994003.1| hypothetical protein YP_2690 [Yersinia pestis biovar Microtus str. 91001] gi|51597105|ref|YP_071296.1| permease protein [Yersinia pseudotuberculosis IP 32953] gi|108808253|ref|YP_652169.1| hypothetical protein YPA_2259 [Yersinia pestis Antiqua] gi|108811479|ref|YP_647246.1| membrane protein [Yersinia pestis Nepal516] gi|145599446|ref|YP_001163522.1| membrane protein [Yersinia pestis Pestoides F] gi|149365071|ref|ZP_01887106.1| putative membrane protein [Yersinia pestis CA88-4125] gi|153950918|ref|YP_001400221.1| permease PerM [Yersinia pseudotuberculosis IP 31758] gi|162421859|ref|YP_001607490.1| putative permease PerM [Yersinia pestis Angola] gi|165926924|ref|ZP_02222756.1| putative permease PerM [Yersinia pestis biovar Orientalis str. F1991016] gi|165936094|ref|ZP_02224664.1| putative permease PerM [Yersinia pestis biovar Orientalis str. IP275] gi|166011254|ref|ZP_02232152.1| putative permease PerM [Yersinia pestis biovar Antiqua str. E1979001] gi|166212327|ref|ZP_02238362.1| putative permease PerM [Yersinia pestis biovar Antiqua str. B42003004] gi|167399010|ref|ZP_02304534.1| putative permease PerM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422722|ref|ZP_02314475.1| putative permease PerM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424731|ref|ZP_02316484.1| putative permease PerM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470403|ref|ZP_02335107.1| putative permease PerM [Yersinia pestis FV-1] gi|170023599|ref|YP_001720104.1| hypothetical protein YPK_1357 [Yersinia pseudotuberculosis YPIII] gi|186896196|ref|YP_001873308.1| hypothetical protein YPTS_2894 [Yersinia pseudotuberculosis PB1/+] gi|218930113|ref|YP_002347988.1| hypothetical protein YPO3068 [Yersinia pestis CO92] gi|229838668|ref|ZP_04458827.1| putative membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895732|ref|ZP_04510903.1| putative membrane protein [Yersinia pestis Pestoides A] gi|229899234|ref|ZP_04514377.1| putative membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901740|ref|ZP_04516862.1| putative membrane protein [Yersinia pestis Nepal516] gi|270489933|ref|ZP_06207007.1| putative membrane protein [Yersinia pestis KIM D27] gi|294504812|ref|YP_003568874.1| hypothetical protein YPZ3_2702 [Yersinia pestis Z176003] gi|21958188|gb|AAM84985.1|AE013744_8 putative permease [Yersinia pestis KIM 10] gi|45437329|gb|AAS62880.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51590387|emb|CAH22027.1| putative permease protein [Yersinia pseudotuberculosis IP 32953] gi|78926791|gb|ABB51608.1| putative membrane protein [Yersinia pestis] gi|108775127|gb|ABG17646.1| membrane protein [Yersinia pestis Nepal516] gi|108780166|gb|ABG14224.1| putative membrane protein [Yersinia pestis Antiqua] gi|115348724|emb|CAL21670.1| putative membrane protein [Yersinia pestis CO92] gi|145211142|gb|ABP40549.1| membrane protein [Yersinia pestis Pestoides F] gi|149291484|gb|EDM41558.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152962413|gb|ABS49874.1| putative permease PerM [Yersinia pseudotuberculosis IP 31758] gi|162354674|gb|ABX88622.1| putative permease PerM [Yersinia pestis Angola] gi|165916239|gb|EDR34846.1| putative permease PerM [Yersinia pestis biovar Orientalis str. IP275] gi|165921275|gb|EDR38499.1| putative permease PerM [Yersinia pestis biovar Orientalis str. F1991016] gi|165989932|gb|EDR42233.1| putative permease PerM [Yersinia pestis biovar Antiqua str. E1979001] gi|166206258|gb|EDR50738.1| putative permease PerM [Yersinia pestis biovar Antiqua str. B42003004] gi|166958429|gb|EDR55450.1| putative permease PerM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051514|gb|EDR62922.1| putative permease PerM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056613|gb|EDR66382.1| putative permease PerM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750133|gb|ACA67651.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis YPIII] gi|186699222|gb|ACC89851.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis PB1/+] gi|229681669|gb|EEO77763.1| putative membrane protein [Yersinia pestis Nepal516] gi|229687636|gb|EEO79709.1| putative membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695034|gb|EEO85081.1| putative membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701538|gb|EEO89566.1| putative membrane protein [Yersinia pestis Pestoides A] gi|262362875|gb|ACY59596.1| hypothetical protein YPD4_2689 [Yersinia pestis D106004] gi|262366798|gb|ACY63355.1| hypothetical protein YPD8_2682 [Yersinia pestis D182038] gi|270338437|gb|EFA49214.1| putative membrane protein [Yersinia pestis KIM D27] gi|294355271|gb|ADE65612.1| hypothetical protein YPZ3_2702 [Yersinia pestis Z176003] gi|320014369|gb|ADV97940.1| putative membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 354 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 126/358 (35%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I +I+ LYF G AP+L+AL++ + WP + + S + Sbjct: 10 RRRFTDPQVITLLVILLAGFCILYFFSGILAPLLAALVLAYLLEWPTAR--LQRIGCSRS 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A I V + + ++ + + + L S +P+ ++ Sbjct: 68 WAASIVFVLFVSIMLLAVFVVAPTAWQQGINLAS----------DMPKMINKFNDFAHTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + +++E + D + +F+ + L + +I + + LFF Sbjct: 118 PARYPALVDAGIVDMMAENLRSKMSGLGDSVVKFSLASLIGLLTLAIYLILVPLMLFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + I + G + + G+ +++ G+ Sbjct: 178 KDKEQMLNAVRRVLPRNRGLAGQVWVE-MNQQITNYIRGKVLEMVIVGIATYLVFFIMGM 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTL 296 + L V+ +IP GA I V + L + I LF+ + + L Sbjct: 237 NYALLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L L+ + + + Sbjct: 297 VPVLFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAD 354 >gi|323344768|ref|ZP_08084992.1| membrane protein [Prevotella oralis ATCC 33269] gi|323094038|gb|EFZ36615.1| membrane protein [Prevotella oralis ATCC 33269] Length = 363 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 127/355 (35%), Gaps = 19/355 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ +L + L P A + + +PI +K LA++ T+ + Sbjct: 18 ILLVGAVLYGVNCLSSVLLPFFIAWLFAYLLYPIVKFVQNKLRVKVRVLAILITMLFVIG 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQS 132 + +L+L ++E + G + RW+ + L K L Q Sbjct: 78 IVGGILYLIIPPIIE---------QFEKLGDVLSRWIHQTTNTNNITALIQKWLQDNQQE 128 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL---FFFYRDGFSISQQLD 189 ++ + T+ + F +SI+ +I L FF D +++ Sbjct: 129 VEKFFRSKDFTDAVKTAVPQVFSFVGQTASVVISIVASLITLLYMFFILLDYEFLTENWI 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + A+W + + V + + + G ++A+ G++ + + P + LG++ Sbjct: 189 RIFPQKHRAFWSDLMKDVERELNNYIRGQCLVALCMGIMFCIGFTILDFPMAIGLGILIG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGG 303 I+ ++P + + ++ G F G L I D + P ++G Sbjct: 249 ILDLVPYLHTFALIPTAFLAMLKAADTGQSFWLIFGLAVGLFILIQAITDMIITPKIMGK 308 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L L +G +GL I L L+ W+ + + KEK Sbjct: 309 AMGLNPAILLLSLSVWGTVLGFIGLIIALPLTTLLIAYWQRYVTKEYQIKEKSKE 363 >gi|261380754|ref|ZP_05985327.1| acetyltransferase, GNAT family [Neisseria subflava NJ9703] gi|284796473|gb|EFC51820.1| acetyltransferase, GNAT family [Neisseria subflava NJ9703] Length = 356 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 123/337 (36%), Gaps = 10/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ + LY L P + A ++ + P+ K ++I Sbjct: 13 IIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWL-QLKRIRRAPASMIIMALA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ + + WL+ I G + Sbjct: 72 LLILLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKLLPWLNSISG-----DYIQIDQES 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L +IP + G + +++ + L++F D S + Sbjct: 127 IIAWLQSHTDELSNTLKAWIPTLMRQSG-NVISGVSNLVLWPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKL 307 I+ IP + ++ + L +W + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATIAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ G L A+ V+ +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|75908450|ref|YP_322746.1| hypothetical protein Ava_2233 [Anabaena variabilis ATCC 29413] gi|75702175|gb|ABA21851.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 379 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 114/339 (33%), Gaps = 17/339 (5%) Query: 13 RWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+ + I++SLY L + +A+++ T + F V+A V Sbjct: 5 QWIGLIAIVLSLYILWQIKEVLLLMFAAVVLATTLNRLAKRFQRS-GVKRGLAVVLAVVI 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I + + EL +V + W++++ ++ Sbjct: 64 FFAIVIGFFWLIVPPFAEQFNELTYRVPQGFER---FNGWINEL--RTRIPAQLVPYIPD 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 SL ++ F+ + ++ + ++ ++ D + + Sbjct: 119 LNSLIQQAQPFINRVLGSSFAIVSGSLEVVLKVLLVLVLTGMLLA-----DPIAYRKVFV 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + G I GL+ + GV + +ALGV+ Sbjct: 174 RLFPSFYRRRVDGILDKCEVSLEGWVTGAVIAMGVVGLMSVVGLSILGVKAALALGVLAG 233 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP G +S + + + + + I + P ++ + L Sbjct: 234 FLNLIPNLGPTLSVVPAMAIAFLD-SPWKVVAVLILYFIIQQTESNFITPIVMAQQVSLL 292 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + V G LGLF+ + + ++A IW + ++ Sbjct: 293 PAVTLISQLFFVTFFGFLGLFLA-LPLTVVAKIWVQEVL 330 >gi|302542836|ref|ZP_07295178.1| integral membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302460454|gb|EFL23547.1| integral membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 474 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 103/307 (33%), Gaps = 19/307 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ ++Y L + + + + + + +++ I + Sbjct: 115 LLVLAGTVYVLMQVISSIQLVVFSFTVALLITALLEPTVTRLRLRGVPRGLATTITFIGG 174 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + F+ + M + EL K+ + RWL P + ++ S Sbjct: 175 FIIMGLVVWFVVWQVMENVDELSDKLQDGID---DLRRWLLHSPFHVTEKQINHIAKSLR 231 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ +E + ++ I+ + + F DG I Sbjct: 232 EAVGANTEEITSAGLEGV---------TVVVEVLTGILLTMFSTLFLLYDGPRIWGWTLG 282 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + G I+A+ + + +G + VP V L V + Sbjct: 283 LVPAAARPGVAGAGPRAWATLTAYVRGTVIVALIDAIFIGVGLFFLDVPMAVPLAVFIFL 342 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP + A+++ + L+ +F A + + I L+PF++G +++ Sbjct: 343 FAFIPLVGAVVSGALAVMVALVTQGVFTAGMVLVVVLAVQQIEGHVLQPFILGRAVRVHP 402 Query: 310 LPTFFGL 316 L + Sbjct: 403 LAVVLSV 409 >gi|229916878|ref|YP_002885524.1| hypothetical protein EAT1b_1151 [Exiguobacterium sp. AT1b] gi|229468307|gb|ACQ70079.1| protein of unknown function UPF0118 [Exiguobacterium sp. AT1b] Length = 375 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 110/320 (34%), Gaps = 7/320 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F P L A ++ + + S+ + S + +I ++ +LF+ G Sbjct: 39 FFATVLTPFLIAGVLFYLTVGFVDWLESRLKRRSFAILIILLFLLLLA----VLFVITLG 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++L + + + R L ++ + + +++ ++ L Sbjct: 95 PILTRQLFALLDAFPRVAEASYRQLVNLYRALEEYTWFQNYINQNETSIDTWIRQLTDTV 154 Query: 146 IDFIPRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I A G + + ++ + F DG ++ + + ++ Sbjct: 155 GAVIGSVAGSLGRVLAFIISGLFTLFIALFLYVFMLIDGGKLASAIVRWVPRTYEQDARQ 214 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + + I+ I+ G A WL VP + LG+ +IP P Sbjct: 215 ILHDMHETIKRYVRAQLIVCTFVGFFATIALWLLDVPFFLPLGIFIFATNIIPYFGPFLG 274 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A ++ + A + + I + + P + G +++ + L+ R Sbjct: 275 AAPAVLIAFIDEPVKAIYVIVAITIIQQLDANVISPLVQGKSLRVHPITITLVLLVAGRL 334 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++G+ + A++ V + Sbjct: 335 AGIVGMLLAVPFYAVLKVTF 354 >gi|160945294|ref|ZP_02092520.1| hypothetical protein FAEPRAM212_02813 [Faecalibacterium prausnitzii M21/2] gi|158443025|gb|EDP20030.1| hypothetical protein FAEPRAM212_02813 [Faecalibacterium prausnitzii M21/2] Length = 424 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 115/347 (33%), Gaps = 16/347 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPI-------YSSFISKKEES--STFLAVIATVSVMCLFIVP 77 L G P + +I + P+ FI +K + + + + L Sbjct: 49 LTGILMPFIYGAVIAYLLKPVCNSIESFLRRFIPEKMNGLINALSVALTILFGLLLVYAL 108 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + + L + L I +EL + + Sbjct: 109 VMMIVPQLITSVTTLYYTAQANITKFMNWANHLEFIEKNEQITELLNSAYAALNTNLDTW 168 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGFSISQQ----LDS 190 T+LK + + S + L+ ++I II + QQ L S Sbjct: 169 NTWLKNTLLPSMQNILSGAAIGVLNVVTVAKNLIIGIIVAVYMLASRKRFVQQGKLVLHS 228 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + K+ G + + G++ + PS + + VI + Sbjct: 229 IVRPRWAQLITEEVKYADKMFGGFINGKIMDSAIIGVLCYIGCLIFKFPSALLVSVIIGV 288 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP P + L++ N A L+ + + + P ++G L Sbjct: 289 TNVIPFFGPFIGAIPATLLILIQNPIKALWFVLFVLVLQQLDGNIIGPKILGNTTGLSSF 348 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G+ +G L A+I + K+ ++ + ++++ Sbjct: 349 WVLFAILLFGGLWGFVGMIVGVPLFAVIYDVIKKLVIHGLQRHQELT 395 >gi|326383536|ref|ZP_08205222.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL B-59395] gi|326197620|gb|EGD54808.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL B-59395] Length = 381 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 119/350 (34%), Gaps = 21/350 (6%) Query: 17 MFIILVSLYFL-------KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + II LY L + F PV A+++ P+ + + S + + A V Sbjct: 35 LLIIAAGLYALGKLFLYAEEVFVPVAIAILLSALLSPLVAWLQRHRVPRSAGV-LSAVVL 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L F+ ++ + + V + RWL + + L Sbjct: 94 TFAIIAAGLTFVVQQLIVGVPRMSGDVAASIAKAR---RWLETGRLHLDSDSLRNVSNDM 150 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + I A + + + I L FF DG I + Sbjct: 151 ITWLKEHEAS---------IATGALDTATVATKLVTAALLTIFLLIFFLYDGHRIWDFVT 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + ++S ++A + + +G + VP + L + Sbjct: 202 KIVPSAHRVHVRGAGDAGYRTLQSYVRATVLVAFIDAVFIGIGLAILRVPMVMPLMALIF 261 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP ++ ++++ + L F A + + + + + L+PFL+G +KL Sbjct: 262 LGAFIPIVGSVAAGSLAVLVALATHGWFTAVLVVVVLIVVMQVEGHVLQPFLLGRSVKLH 321 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + G+ G++G + ++A + E + Sbjct: 322 PVAVILVIAIGLMVAGIVGGLLAVPVLAFANTAITYRPAEGADQDEFVEE 371 >gi|297202806|ref|ZP_06920203.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148203|gb|EFH28885.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 425 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 112/349 (32%), Gaps = 16/349 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + +I L S F L G +L A + P S ++ Sbjct: 42 MPRWLPRAMVLALALIAVFQLGSWAFHQLIGLLTNILIAFFLALAIEPAVSKMAAR-GMR 100 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + L ++ ++V + V W++ G + Sbjct: 101 RGLATFLVFFGVLIVTAGFVTLLGSMLAGQIIKIVEDFP---NYLDSVIAWIN----GHF 153 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +EL + +++ + + A G +F ++ + + F+F Sbjct: 154 HTELKRVDVQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLF-----QLLTIALFSFYFA 208 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + + S+ A + I ++A+ G+ V Sbjct: 209 ADGPRLRRTICSVLPPARQAEVLRAWEIAVDKTGGYIYSRGLMALASGVAHFVLLQALDV 268 Query: 239 PSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P L V +++ IP A+ + + + + A + ++ + + L+ Sbjct: 269 PYAPVLAVWVGLVSQFIPTIGTYLAGALPMLVAFTVDPWYALWVLVFVVVYQQFENYMLQ 328 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P L + + F ++ G +G +G I +A + + Sbjct: 329 PKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYV 377 >gi|253827757|ref|ZP_04870642.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511163|gb|EES89822.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 324 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 123/323 (38%), Gaps = 18/323 (5%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L A ++ + I+ + K + + ++ + ++ F+ +Y + + Sbjct: 3 ILIAFLLFIATHSIFQVILKKIKSTFLTSLLMTLLLLVLCFV-----PIFYVAINLASFA 57 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP-QSLKILSETFLKTNGIDFIPRF 152 + LA+ + + G E L L + + + Sbjct: 58 GNIDLASLQKFFTDMQVKILITGKDFLEYLPVALQQQINDLLLSVNSINWAEILKKALSV 117 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 ++ + +F++I LFFFY G ++ + + + K + V VI Sbjct: 118 VAKISTNSAYFLSDAVFIVIFLFFFYYYGNALGRYCLEIIP-IEKQQIKTLYDEVSAVIS 176 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F + + +G++ G S + LGV ++IP G + + V Y L Sbjct: 177 VVFYSSIVSMVLQGVLFGILMAFYRYDS-ILLGVFYGFASLIPVVGGTLVWLPVVCYELY 235 Query: 272 KGNIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRT 322 GN+ NA + L+ I + + D ++P L+ P+K+ + FF ++ G+ + Sbjct: 236 LGNVTNAIVIALYSIIIIATLADNGVKPFVIAFINRILIETPVKINEMLIFFAIIAGLSS 295 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G G+ +GP + AL + + Sbjct: 296 FGFWGIVLGPAITALFIAMLRIY 318 >gi|300817742|ref|ZP_07097957.1| hypothetical protein HMPREF9345_02815 [Escherichia coli MS 107-1] gi|300529730|gb|EFK50792.1| hypothetical protein HMPREF9345_02815 [Escherichia coli MS 107-1] Length = 353 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVGGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|298250756|ref|ZP_06974560.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297548760|gb|EFH82627.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 372 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 110/344 (31%), Gaps = 16/344 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ I+ + + G + A +I + P+ + ++++ L Sbjct: 31 LVIVGILARFIGLIAGPIILLTLAGLIAYIIHPLVKILERVLP--RPLAIAVVFLALLLL 88 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L F+ + ++ LV+ + QH P + + S Sbjct: 89 LVSLLYFVILAAIQQLASLVTSLQTFVQH----PTFQKQLQPIFHFLTQIGSSPQQLVSA 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +L+ + +P F +++I + +F DG Sbjct: 145 LQQVAGYLQGAVFNILP-----FISNLFAIIINVIILTSFCLYFLIDGSRAVHWFRQNTP 199 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 F A + + G I+A+ L+ GVP + L +I + Sbjct: 200 QRFKAKINFFINTLERSFGGYVRGQIILAVIITLITAVGASFIGVPFIILLAIIVFVFEF 259 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPFLPT 312 +P + + + A + ++ I +++ L P ++G I L + + Sbjct: 260 VPIIGAYISGTIGVLFALANGWHTALIMAIFVTIINGVLEGQILAPRILGHAIGLHPIIS 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLM----ALIAVIWKESIMAIKEN 352 F L+ G G++G + + ALI W E Sbjct: 320 IFALLIGSSLFGIIGAVLAAPIAGLCQALIQACWSNWRTTHPEE 363 >gi|282862278|ref|ZP_06271340.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282562617|gb|EFB68157.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 394 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 106/352 (30%), Gaps = 22/352 (6%) Query: 13 RWMIMFIIL--------VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 R MIM + L + Y L G ++ A + P + Sbjct: 7 RAMIMALALYGCFQLGSWAFYQLIGLLTNIVIAFFLALAVEPAVGRMADR-GMRRGLATF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++V+ + ++ L ++ ++ ++ V W++ + Sbjct: 66 LVFLAVLIAGVGFVVLLGSMLAGQIANMIEDFP---KYLDSVINWINQTFHTELSRVGVQ 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L H L+ + L ++ + + F+F DG + Sbjct: 123 DSLLHSDWLQRYVQNS---------ATGVLDVSTTVLGGLFRLLTIFLFSFYFAADGPRL 173 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L S+ A + I ++A+ G+ VP AL Sbjct: 174 RRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYVLLVFLDVPYAPAL 233 Query: 245 GVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +++ IP A+ + + + + A + + + + L+P L Sbjct: 234 AVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLAFVVVYQQFENYVLQPKLTSK 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + F ++ G MG +G + +A + + + Sbjct: 294 TVDIHPAVAFGSVIAGTALMGAVGALVAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|154484841|ref|ZP_02027289.1| hypothetical protein EUBVEN_02559 [Eubacterium ventriosum ATCC 27560] gi|149733794|gb|EDM49913.1| hypothetical protein EUBVEN_02559 [Eubacterium ventriosum ATCC 27560] Length = 398 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 112/327 (34%), Gaps = 13/327 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFLFYY 84 P I F S K I+ + + L ++ + + Sbjct: 37 PFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLTIILAAGVMVLVMFG 96 Query: 85 GMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMW-ASELWTKHLSHPQSLKILSETFLK 142 + ++ + + ++ + IP + W+ + +L + P + L Sbjct: 97 VIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQFQPDQAIKWGISLLG 156 Query: 143 TNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + S G I + +S F LF + + + + + Sbjct: 157 NGVGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKEKLHLQVRKVIFAFIPKQKADA 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I + + + G + A+ G++ + +P + +G++ A A++P Sbjct: 217 ILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKMPYALLIGILIAFTALVPIFGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 AV +L+ N A + + I + P +VGG + LP + + G Sbjct: 277 FIGCAVGSFLIFMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSVGLPSIWVLAAVTIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 MG++G+ I L+++ I++E + Sbjct: 337 GNLMGIIGMLIFIPLVSVFYTIFREFV 363 >gi|93006679|ref|YP_581116.1| hypothetical protein Pcryo_1855 [Psychrobacter cryohalolentis K5] gi|92394357|gb|ABE75632.1| protein of unknown function UPF0118 [Psychrobacter cryohalolentis K5] Length = 368 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 114/331 (34%), Gaps = 9/331 (2%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY + P + A ++ + P+ +I ++ ++ L +L Sbjct: 26 LYLMMPVIVPFVFAFVLAYLFNPLVKRLSKYI--KRWIAIIIVYSTITLSMVLLLWWLIP 83 Query: 84 YGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ + + V W + + ++L +T K Sbjct: 84 TLWHQLQAAWDYLPQLLTWYNEVVREWFAS---NSRIRLPELESKGFSETLVEYMQTNYK 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + M F++ I+ + I F+F + + + Sbjct: 141 FEDAGTMMSQILASSMNFINNAGLIVLVPILTFYFLFNWEQRLHTWKMAIPAPYCKKVIQ 200 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 I++ + + + G ++ + G + L G+ + +G++ I + +P G I Sbjct: 201 IAQECDRALMAFIKGQLLVMVLLGAIYAVQLQLIGLELGLIIGMVAGIASFVPYLGFGIG 260 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGG 319 F A I L + + + GA + L+P L+G I L L F ++ G Sbjct: 261 FVAAIIACLFQFGLDWTYLSLIAGAFLIGQAAEGYILQPLLLGDKIGLSPLWVIFSVLAG 320 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +G +G+ I + A++ V+++ + Sbjct: 321 ASLLGFVGMLIALPVSAVLNVLFRHFYTHYQ 351 >gi|332157802|ref|YP_004423081.1| hypothetical protein PNA2_0160 [Pyrococcus sp. NA2] gi|331033265|gb|AEC51077.1| hypothetical protein PNA2_0160 [Pyrococcus sp. NA2] Length = 338 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 135/357 (37%), Gaps = 32/357 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I+ I+ IIL ++ LK P++ + + ++P + + + ++ L Sbjct: 3 TVEKERIVWVAIILIILFLVWETLKELITPIVFGITATYLAYPFHVKLSKRFGKRTSILI 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ VS++ + + + + +K L S + WL + + S L+ Sbjct: 63 LLIVVSLLSVMF--FIGVALWITDTLKNLYSYLDAFF-------SWLGSLKVPGFLSSLF 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + T+ + + ++ + + L +I + + + Sbjct: 114 DA---------------MATSFPEKLRSILLQYTLSLPKFALQLIVFLAVFYASLSNADF 158 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP---S 240 +++++ L +K+ V I + +I +G L +++ G+ Sbjct: 159 LAKEIYELIPLSNRELGEKLIDKVKDTIDAIIKTWLFFSIIKGTFLALGFYVFGISNVAG 218 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 +A GV+ I+ ++P LL+K ++ A ++G + + + D ++P Sbjct: 219 SIAAGVLCVILELLPVVGGWMMWLAGAVLLLKRSLVLAILFSIYGIMTISPLPDYIIKP- 277 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 K+ + G+ GG G++G+ +GP+ + L+ + K+ Sbjct: 278 --KKKAKVSSVVALVGIFGGWIAFGVVGIILGPIAIGLLLALIDAWREISTRQPSKV 332 >gi|226364629|ref|YP_002782411.1| hypothetical protein ROP_52190 [Rhodococcus opacus B4] gi|226243118|dbj|BAH53466.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 427 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 14/307 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ K S ++ + + + + F+ + + L + + Sbjct: 96 PLVDWLQGKGVPRSA-AVLVVLIGSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQ--- 151 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + WL+D P ++ S +S++ + A+ G IF L Sbjct: 152 IQGWLTDGPFHFSEDQIRQAGDSVVKSIQENRQQLTSGA-----LTTATVVGEIFTGALL 206 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + L FF G I + + L + + +A + Sbjct: 207 T----LFTLIFFLYGGTQIWEFVTRLVPSTSRRRVRLAGSEGFGSLIGYVRATVAVAAAD 262 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + +G+ + GVP + L + I A IP GA ++ + L+ A + Sbjct: 263 AVGIGAGLAILGVPLALPLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGI 322 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L+P L+G ++L L + G+ G++G + ++AL+ + Sbjct: 323 IIGVMQLEAHVLQPLLLGRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRS 382 Query: 345 SIMAIKE 351 + A E Sbjct: 383 LLSADPE 389 >gi|183599400|ref|ZP_02960893.1| hypothetical protein PROSTU_02873 [Providencia stuartii ATCC 25827] gi|188021642|gb|EDU59682.1| hypothetical protein PROSTU_02873 [Providencia stuartii ATCC 25827] Length = 357 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 114/359 (31%), Gaps = 14/359 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + + ++ + ++F AP+L A+++ + WP + + + S Sbjct: 10 RRRFADPQAVALFTLLIVGFCIIFFFSNILAPLLVAIVLAYLLEWPTH--LLERIGCSRV 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + +L + + LV + + + +P A Sbjct: 68 VAVSIILTLFAGISAMVILIIAPTAWQQGINLVGDLP---KMVTRFNEFAQTLPERYPAL 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L+ ++ + + + + + +FF +D Sbjct: 125 VDAGIIDMMADNLRSRLSGVAESVVKMSVASLIG-----VFTLAIYTVLVPLMMFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + K+ + + I + G + G+ + + + Sbjct: 180 KQKIISSVQKVLPR-NRLLVGKVWVEMNQQITNYLRGKVTEMVIVGVCTYAGFAYFDLRY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRP 298 V L V+ + +IP GA V + L + I + L + + + P Sbjct: 239 SVLLSVLVGVSVLIPYIGAVAVTIPVVLVALFQWGIGSDFWSLIIVYLVIQGLDSNLFVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L L +V G G+F L LI + E+++K+ Sbjct: 299 LLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVINVWPEDTSESQQKLE 357 >gi|325264631|ref|ZP_08131361.1| putative membrane protein [Clostridium sp. D5] gi|324030293|gb|EGB91578.1| putative membrane protein [Clostridium sp. D5] Length = 398 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 115/347 (33%), Gaps = 8/347 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSVM 71 +++ + L + F A I+ + + K+ ++ V + Sbjct: 30 LVLDALAFVLRIVFPFLLGGAIAFILNVPMHFLEKTLFYNKKGKVWVQRLARPLSLVLTI 89 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMW-ASELWTKHLSH 129 + + + + + ++ V + Q +P + W+ ++ L Sbjct: 90 LFVLGVISLVIFVVVPKLGSTVISLGTTIQDFVPKMQHWVEELFDNNKEIVSLVNDVQID 149 Query: 130 PQSLKILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L F K + A + ++ +F L R I + Sbjct: 150 WDKLLNGIMEFFKNGAGSVLGSTFTVAKSIVSGVTTFVIAFVFACYILLQKERLNIQIRK 209 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + + K S G + A+ G + A + +P + +GV Sbjct: 210 IMYAYMKKDLVKKVLDVCSLTYKTFSSFLTGQCVEAVILGTMFVIAMSVFRLPYALLVGV 269 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A A+IP V +L++ A + + I + P +VG + Sbjct: 270 LIAFTALIPIFGAFIGCFVGAFLILMVAPMKALMFVIMFLVLQQIEGNLIYPKVVGSSVG 329 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + + G MG++G+ + +++++ + + ++ NK Sbjct: 330 LPSIWVLAAVSIGGSLMGVVGMLVFIPVVSVLYTLLRNNVYGRLANK 376 >gi|319937570|ref|ZP_08011975.1| hypothetical protein HMPREF9488_02811 [Coprobacillus sp. 29_1] gi|319807410|gb|EFW04019.1| hypothetical protein HMPREF9488_02811 [Coprobacillus sp. 29_1] Length = 337 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 123/342 (35%), Gaps = 14/342 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + I ++ V Y F P A++ F P+ + + V Sbjct: 1 MKRTKVIGLICVVIYCFVLKYMFHVIF-PFAFAVVCYFVMKPLIDRLEKCFHIQRSAIGV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + L LF YG+ K+ + + + +P + Sbjct: 60 SLLLVIYLILAILLGCLFTYGVFFTIHFFEKIPMYYEDML--------LPFLEQLTIWVQ 111 Query: 125 KHL--SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +H + + + FL + ++ F++ I + Y S +I+ FFF D Sbjct: 112 QHFPILMNEDYLLALQNFLGQSLLNVAGSFSTVITQIPI-YLFSFFLFVISTFFFMLDYE 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L S+ + +I K + I+ +L + + + + Sbjct: 171 EMKGNLLSICSQHVMNSFVRIKNKCLKSLWVYVKCQLILMSICFFILLIGFAVMRMSHPL 230 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +TA++ +P G I + I L++G A +FL + + +V L P ++ Sbjct: 231 LYAFVTALLDSLPFIGVGIVLIPLCIVYLLQGAYLKAFYIFLIY-LIINVVRSLLEPRIM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +K+P ++ + G++G+ + P+ M+LI Sbjct: 290 NKQMKIPSFLLLLSMMVHLYFFGMIGVILSPIHMSLIYGFLD 331 >gi|308174162|ref|YP_003920867.1| hypothetical protein BAMF_2271 [Bacillus amyloliquefaciens DSM 7] gi|307607026|emb|CBI43397.1| RBAM_021860 [Bacillus amyloliquefaciens DSM 7] Length = 356 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 112/311 (36%), Gaps = 10/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P++ + ++ + PI K + + LF++ L + Sbjct: 41 FPPIVLSGVLYYLCRPIVRVLHEKVKLPEGIAILAIYAVTAGLFVLFLYTAGPAVQKQFA 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + W+ + W + H S K ++ +G I Sbjct: 101 AFTDHIPELS---AKAENWIRHL-----QDSKWFSRIQHEDSFKKAADKAANYSGS--IA 150 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S + ++ + AL++ ++G ++L L K+I + + + Sbjct: 151 DSLSSLAGAAANAAITAAIIPFALYYMLKEGNKAPRRLLRLLPEKHQKEGKQILQDMDEA 210 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G +++ G+++ + Y++ G+ + LG + +IP P T + + Sbjct: 211 LSSYIQGQLLVSFCVGVLVTTGYFIIGLDYPLVLGAFAMVTNLIPFIGPWIGTFPGVIVG 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + I + + + P ++G + + L F L+ + G+ G+ + Sbjct: 271 LFDSPTRAVLVVIVVVIVQQLESQLISPQIMGRKLDIHPLTIIFLLLAAGKFSGIAGMLL 330 Query: 331 GPVLMALIAVI 341 A+ VI Sbjct: 331 AIPGYAVAKVI 341 >gi|156742454|ref|YP_001432583.1| hypothetical protein Rcas_2485 [Roseiflexus castenholzii DSM 13941] gi|156233782|gb|ABU58565.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 435 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 118/355 (33%), Gaps = 17/355 (4%) Query: 9 QGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I RW ++ + + S L+ + P + L++ + P F + Sbjct: 54 RLIARWSLVALAVYSIGWMLWTTRPVLIPFIIGLVLAYLMAPAVDFFDRWMP--RWLSIL 111 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKV---VLANQHGIPVPRWLSDIPGGMWASE 121 + + + + +++ L+ ++ + R D Sbjct: 112 VVYILGFLGIAATFALIIPPLIEQVERLIHQLPSFREVQTFIDSIIRQYRDQVPPSLQQP 171 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +SL+ +T+L+ G + + + L I + I LF+ D Sbjct: 172 IEDSLANLLRSLQNNIDTYLQRGGA--FLLNQLIQLLNTVTFILGFISLPIWLFYVLYDK 229 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW---LAGV 238 + L + + + IV +V+ G I+ + GL +G + G Sbjct: 230 HRGRVFFNQLVHPRARSDFWNVWDIVNRVLGGYIRGQIILCVSVGLAVGIGLVGLEMLGF 289 Query: 239 P---SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 P + L +I + IP P + L + + L + + Sbjct: 290 PLGDYILVLSLIAGVTEFIPVLGPTIGAIPGVILGFGISPTAGIAVLLLYIAVQQLENSL 349 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L P ++G + + ++ GL G+ + +A + ++K + + ++ Sbjct: 350 LVPRIIGESVGVHPAVLTVAMIVMGTLFGLFGILLAAPAVATVRDLFKYTYLRLE 404 >gi|253564021|ref|ZP_04841478.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947797|gb|EES88079.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161674|emb|CBW21214.1| putative transmembrane protein [Bacteroides fragilis 638R] Length = 379 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 128/365 (35%), Gaps = 20/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R I ++V L L G P A +I + +P+ F K Sbjct: 1 MERKKITFDSFIRGSICCALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYY-GMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S +++ + + + + L +L + EM + +V +G S Sbjct: 61 FKSRIISIFCALFSITIVGISLFYLLVPPMLAEMGRMNDLLVTYLTNGTY-----SSGTV 115 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMII 172 SE KH+ +ILSE + + +P+ + I S I ++ Sbjct: 116 PPTLSEFIHKHIDLQALNRILSEENIMNTIKETVPKLWALVAESINILFSVFASFIILLY 175 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F D SI++ L + + + + + F G +A G++ Sbjct: 176 VVFILL-DYESIAEGWLHLLPGKYRTFASNLVNDIQDGMNRYFRGQAFVAFCVGILFSIG 234 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P +ALG+ + M+P I F + ++ G F + Sbjct: 235 FLIIDFPMAIALGLFIGALNMVPYLQIIGFLPTIVLAILKAADTGENFWVILAGALIVFI 294 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D L P ++G L L +G+LG+ I L L+ ++ I Sbjct: 295 VVQAIQDGFLVPRIMGKITGLNPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFI 354 Query: 347 MAIKE 351 + ++ Sbjct: 355 INKEK 359 >gi|192360496|ref|YP_001981496.1| membrane protein, PerM family [Cellvibrio japonicus Ueda107] gi|190686661|gb|ACE84339.1| membrane protein, PerM family [Cellvibrio japonicus Ueda107] Length = 401 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 112/329 (34%), Gaps = 24/329 (7%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA------TVSVMCLFIVPLLFLFYY 84 AP+++A++I F + + IA ++ + LFI+P+++ Sbjct: 74 LAPMMAAMVIAFLMQGMVTRLRQWGMGH-NLAVTIAFVVLLVSLGALLLFIMPIMW--NQ 130 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + EL V+ + + +P +L+ + + +F TN Sbjct: 131 LVRFFNELPRMVIEGQELLMGLPERYPQFLSERQLEQLFASMTAEISGMGQRVLSFSVTN 190 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + +I + I +FFF +D I H P K+ Sbjct: 191 IPMLIG------------LMIYLILVPILVFFFLKDSSLIMAWCARFLPHHRPV-MAKVW 237 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFT 263 + + + + G I + G V A+ G+ L + + +IP GA + Sbjct: 238 QEMNQQFANYVRGKVIEIVIVGAVSYVAFICLGLNYAALLAIAVGLSVVIPFIGAAVVTL 297 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V++ + + + ++D L P L + L + ++ Sbjct: 298 PVALVAYFQWGWSAPFIYLMLAYTIIQVLDGNVLVPLLFSEAVNLHPVAIILAVLVFGGL 357 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G G+F L L+ I +A++E Sbjct: 358 WGFWGVFFAIPLATLVKAILYAWPIAVQE 386 >gi|170767574|ref|ZP_02902027.1| permease PerM [Escherichia albertii TW07627] gi|170123908|gb|EDS92839.1| permease PerM [Escherichia albertii TW07627] Length = 353 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLILFVGILLLMAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLSMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMVVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|294676369|ref|YP_003576984.1| hypothetical protein RCAP_rcc00812 [Rhodobacter capsulatus SB 1003] gi|294475189|gb|ADE84577.1| protein of unknown function UPF0118, transmembrane [Rhodobacter capsulatus SB 1003] Length = 367 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 121/351 (34%), Gaps = 14/351 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + ++ + L+ L P L I + P+ + S Sbjct: 5 VRSQITIWGLSAAVLALVLWKLGDVLLPFLVGGAIAYFLDPLADRLE-RLGLSRALATTS 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + +V L + + ++ LV P + + G + ++ Sbjct: 64 IALIATLGIVVLALAVAPLLVRQLIGLVETA----------PAIATRLQGFLTSTFPSMM 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + S + + M ++ + I+ + + F+ D + Sbjct: 114 EHGSIINESLTSLGNAVKARGGELAQGLLSSAMTLVNAVVFIVVVPVVTFYMLLDWDRMV 173 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+D+L +++ R + +V+ G + + G + AG+ + G Sbjct: 174 AQIDTLLPLDHAPTIRQLGRDIDRVLSGFVRGQVSVCLILGAFYAAGLMAAGLSFGLLAG 233 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 I + IP + A++I L + G+ + + AI F+ + P LVG Sbjct: 234 AIAGALTFIPYVGALVGGALAIGLALFQFWGDWMSIGLVAGIFAIGQFLEGNVITPRLVG 293 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L L F L G +G+ + + A+I V+ + +I ++ + Sbjct: 294 NSVGLHPLWLIFALSAFGTLFGFVGMLVAVPVSAVIGVLIRFAIEHYRQGR 344 >gi|326202288|ref|ZP_08192157.1| sporulation integral membrane protein YtvI [Clostridium papyrosolvens DSM 2782] gi|325987406|gb|EGD48233.1| sporulation integral membrane protein YtvI [Clostridium papyrosolvens DSM 2782] Length = 353 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 125/326 (38%), Gaps = 5/326 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I +S+ +L FFAP + ALI+ + + P+ + + + S A ++ + M L + Sbjct: 21 FAVIYLSMSYLLPFFAPFVIALIVSYINEPV-IKLLQRLKISRKAAAAVSLLFTMSLLGL 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L E+ L + + L + + ++L Sbjct: 80 VLTVGILKMYNELIVLQDNLTKYSSDISVKINGLIHKATLFYNGLPDQVTSTITKNLISF 139 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 SE I + ++ + +I I+ +F D SIS + Sbjct: 140 SEKI--GLIITSVIQYVINTVSSIPRLTVFVIVTILGTYFISSDKKSISSFFYRQLPFSW 197 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + K + F + I+ + + ++ V + ++ + IP Sbjct: 198 RKNIVSLKKDTFKALLGYFKAILILMGFTFIEVSIGLFILNVDYAFLIALLVGLSDAIPI 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + ++ +I G++ A L + + + ++ + + P +VG I L L T F Sbjct: 258 MGTGVVMVPWILWTVISGDMPLALGLSIIYVLGI-LIRQIMEPKIVGSQIGLHPLVTLFA 316 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 + G++ G++G+F+GP+ + ++ + Sbjct: 317 MYIGLKFFGIIGMFVGPISIIVVKKL 342 >gi|15790438|ref|NP_280262.1| HtlA [Halobacterium sp. NRC-1] gi|169236174|ref|YP_001689374.1| hypothetical protein OE3054R [Halobacterium salinarum R1] gi|10580930|gb|AAG19742.1| Htr-like protein [Halobacterium sp. NRC-1] gi|167727240|emb|CAP14026.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 382 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 122/365 (33%), Gaps = 33/365 (9%) Query: 1 MRETMLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M +T ++ W I + +L Y + F + + + + P+Y SS Sbjct: 1 MGDTRIDRGRAAWWAIGATLTAALVYVVYTFVGTFVLGFFLYYATRPVYRRVDRHLRSSS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 V V + + ++ L Y + ++EL + V + A Sbjct: 61 VAAVVSLLVLALPV----VVLLSYTTAVGIQELTRVLNAPQIDLTTVEALVQPYVDVSRA 116 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L P I+ R A ++ + + +I F+ R Sbjct: 117 VQDPQSLLGQPSVR----------AAINTTLRSAGQYAGFLGTAFVHLFAVITIAFYLLR 166 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL---- 235 D +++ S + + + + F G + A G++ + + Sbjct: 167 DDTRLAEWFHSRFADSDGV-VRAYTAAIDADFSNIFFGNILFAFITGVIASITFNVLQIV 225 Query: 236 ----AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK------GNIFNATCLFLW 284 +P +G++T ++IP G + + + +L + G F A + Sbjct: 226 FPSSLSIPYPTLMGLLTGAASLIPVVGIKLVWIPLLGWLAVAAARSGGGYGFVAVFGVVA 285 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + FI D +RP++ G L V G G G+F+GP+++ + + Sbjct: 286 AVVIDFIPDLVVRPYVSGR--DLHLGLVMLAYVFGPLIWGWYGIFLGPMVLVFVVHFARL 343 Query: 345 SIMAI 349 + + Sbjct: 344 VLPEL 348 >gi|237746880|ref|ZP_04577360.1| permease [Oxalobacter formigenes HOxBLS] gi|229378231|gb|EEO28322.1| permease [Oxalobacter formigenes HOxBLS] Length = 359 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 123/319 (38%), Gaps = 11/319 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P ++ I+ + PI SK+ + +IA + VM L I + + ++ + Sbjct: 33 TPFIAGAILAYALNPIVDWLRSKRIGTLRLPRLIAVIIVMLLLI---AIVTAFALIMIPM 89 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF--I 149 L+ + + + +++ + + KIL+E F+ + + Sbjct: 90 LIREWPMLYEQIPAFIAKVNNYLSPILNELGIQIPADNAGIKKILTEQFVPKGDGVWKSL 149 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A G L + ++I + + LF+ +D + ++L + + SR V Sbjct: 150 IASAKFGGTAVLTWAWNLILIPVVLFYLLKDWHIMMRKLRDMIPRRWVTRAVSFSREVNS 209 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP---GGAPISFTAVS 266 ++ G ++ + LAG + +G++T ++A IP ++ + Sbjct: 210 MLAQYLRGQLLVMVILSSYYSITLALAGYNVALPVGIMTGMLAFIPYIGICFGLALAITA 269 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L G T ++G F D L P LVG I+L L F L+ + G Sbjct: 270 TLLQFTGMEAWITLGIIYGFGYSF--DGLLMTPKLVGDRIQLHPLIVIFALLAFGQLFGF 327 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + A+++V +K Sbjct: 328 VGILLALPSSAILSVAYKH 346 >gi|153854815|ref|ZP_01996049.1| hypothetical protein DORLON_02047 [Dorea longicatena DSM 13814] gi|149752722|gb|EDM62653.1| hypothetical protein DORLON_02047 [Dorea longicatena DSM 13814] Length = 385 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 111/349 (31%), Gaps = 13/349 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------EESSTFLAVIATVSV 70 +++ + F+ P L I F + K + + I+ + V Sbjct: 30 VVISAFQFVLNIVYPFLLGGAIAFALSVPMNFVERKLFTERKISEKYKRKYARGISLMLV 89 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSH 129 + L + + + ++ + + + Q IP + W +L Sbjct: 90 IAGVTGILAMIIFGLLPQLAGTFANLGKSIQEFIPQVQGWADHWFHNNKEIMNVVNNLEF 149 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-- 187 + + + NG + + + + + + Q Sbjct: 150 DWNKIMEAAAGFLKNGAGSVLETTINTAKNIIGAVGTFFIAFVFAVYILLQKEKLRIQAK 209 Query: 188 --LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + K G + A+ G + L +P + G Sbjct: 210 KVLFAFVRKGRAEAVLEVLALTYKTFSGFLTGQCVEALILGAMFVITMTLFRLPYALLTG 269 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A A++P AV +L+ + F A + + I + P +VG + Sbjct: 270 IVIAFTALVPVFGAFIGCAVGAFLIFMVSPFKALMFIVLFLVLQQIEGNLIYPHVVGNSV 329 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP + + G MG++G+ I LM+++ +++E + K Sbjct: 330 GLPSIWVLAAVSVGGSLMGIVGMLIFIPLMSVVYALFREVVYIKLRQKN 378 >gi|23099624|ref|NP_693090.1| hypothetical protein OB2169 [Oceanobacillus iheyensis HTE831] gi|22777854|dbj|BAC14125.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 368 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 125/353 (35%), Gaps = 14/353 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + ++V++YF F P+L A I+ P+ +K +I Sbjct: 11 RAILVIGLTITVIVAIYFSFPFIYPILIAYILASLFQPMVRGIENKLNFPKIPAIIITVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF L L K+ QH + + + ++ + S Sbjct: 71 CFLTLFTGALFLAITELYQGTIFLADKIPTHYQHFVLYLENMFNTHILPMYEKVLSYIDS 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-----------YCLSIIFMIIALFFF 177 Q + + ++ T D I + F + + +I+F++IA Sbjct: 131 LDQGYQETVKNYIAT-LSDLIASGGASFLQVTISNIPMFIAAIPSSVTNIVFILIAACMI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + I + + KI+ + F I+ ++ + Sbjct: 190 SYEMDRIHSFFKEIFPARIQSIQNKIASHFKLAVVGYFRAQLILVFTTACIILIGLLILQ 249 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + + + AI +IP G I F I+ I GN L L + I+ + L Sbjct: 250 VEHPLTIVLFAAIADIIPYVGTGIIFIPWIIFSFITGNYSLTIGLSLLYGFVV-ILRQIL 308 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P ++ I + L G+ G++ +G +G+F+ P+L+ L + + + + Sbjct: 309 EPKVLSSSIGIHPLVMLIGMFIGLKVLGFIGIFLSPILLVLFKGLIETGVFHL 361 >gi|295094550|emb|CBK83641.1| Predicted permease [Coprococcus sp. ART55/1] Length = 464 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 109/335 (32%), Gaps = 8/335 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVMCLFIVPLLFLFY 83 L F A ++ + K+ V +S +C+ V L F Sbjct: 41 ILMPFVIGFAIAFVVNVPMKGLEKVLFKNKDSRLYRFRRPVCLILSFLCIIAV-LTFAIT 99 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRW--LSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + EM + ++ + + + + + + +L + Sbjct: 100 MIIPEMSKTITMFAEKLPSAMDDIQRKAIKLMKDQPEIVDKIKSININWDALISNVVGIV 159 Query: 142 KTNGIDFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 K G + AS +D + + F L + L ++ Sbjct: 160 KNGGSSVLSSTFSIASSVVGAVVDVLVGLFFACYILAQKETLEKQVKGVLYAVFREEKAD 219 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + K G + A GL+ + +P + + +I A+ A+IP Sbjct: 220 RFIQTCVLADKTFSKFISGQCLEACILGLMFFITMTIFRIPYALTVSIIIAVFALIPVVG 279 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +++ + A + + I + P +VGG + LP + ++ Sbjct: 280 AFVGCFAGTIMILVEDPKRAIVFLIIFVVLQQIEGNFIYPHVVGGSVGLPSIWVLVAVML 339 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +G+LG+ I L +++ + +E ++ +K Sbjct: 340 GGDMLGILGMLIFVPLFSVLYAMSEEYVVKRLRDK 374 >gi|188586396|ref|YP_001917941.1| protein of unknown function UPF0118 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351083|gb|ACB85353.1| protein of unknown function UPF0118 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 368 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 123/352 (34%), Gaps = 30/352 (8%) Query: 12 MRWMIMFIILVSLYFLKG-----------FFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +I+ II LY+L F P L A ++ + P K Sbjct: 17 TSVLIVIIIFAVLYWLLSTAVILRSQIINFLLPFLFAFVVAYILKPAVDYMEENKIPR-- 74 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++++ L+ + FL + G +V++V P++ DI + Sbjct: 75 ------ILAILILYAIIGSFLVFVGGRAFATIVNEVQKLISI---APQYARDIQFFLMDL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFI--------PRFASRFGMIFLDYCLSIIFMII 172 ELW + P + + + F + + LS++ I Sbjct: 126 ELWIERHDLPIMVTETIRENIAEAETELTEYLDRIVDVESLLAFALNIFGHFLSLVAFPI 185 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 LF+F +D I + L L F + R + + I + II GL+ Sbjct: 186 ILFYFLKDTDLIKKNLSFLIPGRFRKRFLFAFRDINRTIGAYIRSQIIICGFIGLLTYLG 245 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GV + LG+ I +IP P S + + A + + I I Sbjct: 246 LMILGVDFALVLGIFAGITNIIPYFGPFIGAIPSTVVALLQTPTLAIKVIILITIIQQIE 305 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P + G + + L L+ G + G+LG+ + ++A+ V+ + Sbjct: 306 SQIVAPQVFGKNLAIHPLAVITVLIAGGQFFGILGMILAVPVLAITRVVVRH 357 >gi|24113821|ref|NP_708331.1| putative permease [Shigella flexneri 2a str. 301] gi|30063867|ref|NP_838038.1| putative permease [Shigella flexneri 2a str. 2457T] gi|110806423|ref|YP_689943.1| putative permease [Shigella flexneri 5 str. 8401] gi|24052909|gb|AAN44038.1| putative permease [Shigella flexneri 2a str. 301] gi|30042122|gb|AAP17848.1| putative permease [Shigella flexneri 2a str. 2457T] gi|110615971|gb|ABF04638.1| putative permease [Shigella flexneri 5 str. 8401] gi|281601894|gb|ADA74878.1| putative permease perM [Shigella flexneri 2002017] Length = 353 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPVLMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|331663166|ref|ZP_08364076.1| putative permease [Escherichia coli TA143] gi|331058965|gb|EGI30942.1| putative permease [Escherichia coli TA143] Length = 181 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 1/141 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 FI+P+ L + L+ K + + +P WL+ IP +L Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGD 136 Query: 134 KILSETFLKTNGIDFIPRFAS 154 E+ + R+AS Sbjct: 137 GDHGESPPLYWHHHHLVRWAS 157 >gi|325917145|ref|ZP_08179375.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536625|gb|EGD08391.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 346 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 102/337 (30%), Gaps = 23/337 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L+ L V A+++ + S + S + + + Sbjct: 12 RVIVVLALVACAWMLWTLSDLLLMVFGAIVVAVLLRAVSSWLTRRTRLSDGWALALVVIV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F L E+ L + Q V WL+ P G EL Sbjct: 72 LTAGFSALLWLFGSQLASEVGALQRTLP---QAWTRVHDWLAAGPLGPAVEEL------- 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQ 187 +N FA + L ++ + YR G + Sbjct: 122 -----TRQAPARVSNLAPRAGAFALSITGGVANLFLVLVGAVYLAAQPHLYRRGALL--- 173 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L A + +R G I + G + G W G+P +ALG++ Sbjct: 174 ---LLPAHVRATTDDALQASGTALRLWLRGQLIAMVVVGALTGLGLWALGIPGALALGIV 230 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P PI +I L + A + I L P + + L Sbjct: 231 AGLLDFVPIVGPILAAIPAILLGFTVSPQMALATAALFVVVQQIEGNLLLPLIQQRTVDL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P + F L G +G G+ + L + V+ K Sbjct: 291 PPVLLLFSLFGIGMLLGPPGVLLAAPLTVVGYVLIKR 327 >gi|319792186|ref|YP_004153826.1| hypothetical protein Varpa_1504 [Variovorax paradoxus EPS] gi|315594649|gb|ADU35715.1| protein of unknown function UPF0118 [Variovorax paradoxus EPS] Length = 427 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 112/342 (32%), Gaps = 20/342 (5%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ +L S++ L+ F P++ +L++ + P+ A I Sbjct: 75 LVVLAVLASVFALQWGQAVFIPLMLSLLLTYALSPLVELLHRWHLPRWIGAAFILVGLFG 134 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--------LSDIPGGMWASELW 123 + + Y +LV + +A Q R L + E Sbjct: 135 GI-----GWTGYSLSGNASQLVDSLPVAAQKLGQAMRRDKGASATPLESVQQAAAQLEKA 189 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + + + + + + L + +F G + Sbjct: 190 AEENSARVASRRGVARVIIERPGFNVRDYLLSGTVGLLSALGQFTLVAFLTYFALCSGDT 249 Query: 184 ISQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++L + + + + I L ++ GL G A+W G+ + Sbjct: 250 FRRKLIKITGSSLQKKKVTVHVLDDITRNIERYLLVQIFTSVLVGLATGLAFWAIGLENA 309 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 G+I A+ +IP G+ I A + ++ ++ + I+ L P+ Sbjct: 310 AVWGIIAAVTNLIPYIGSVIVLAAAGLVAFLQFNSLQMGLAVAGTSLAIHTIIGNLLLPW 369 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L ++ + F G++ G+ GL +G + +I I Sbjct: 370 LTSRTSRMNPVAVFVGVIFWGWLWGIWGLLLGIPITMVIKSI 411 >gi|288870499|ref|ZP_06114307.2| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288866964|gb|EFC99262.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 377 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 125/348 (35%), Gaps = 20/348 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I+ +I +++ + F+ FF P + II + P+ + + ++ Sbjct: 11 RLILNIVIPLLVIWLVCFIGPRLLKFFLPFVIGWIIAMIANPLVKFLEKRVKIVRKHSSM 70 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKV--------VLANQHGIPVPRWLSDIPGG 116 + V+V+ L I L F+ + E V + + + + V R L +P G Sbjct: 71 MIVVAVLALIITLLYFVISKLVSETVGFVGDIPKYYESASIEVQKMLLSVERLLQFLPQG 130 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S+ + H L+ + + A + I I + + Sbjct: 131 --VSDSVNQFFGHIGEYLNLAVQKIASPT----VTVAGNVVKSIPAALVYTIVTIFSSYL 184 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F + I Y+K + + V ++ FL I +VL + + + Sbjct: 185 FIVNRDKILDFFKKYMPEGGSKYYKYLRKDVRHLVGGYFLAQFKIMFVVAVVLAAGFLVL 244 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V + + VI A + +P G ++ L G+ + A + + ++ + Sbjct: 245 RVDYALLIAVIVAFLDFLPVLGTGTILVPWAVIRLFSGDTYFALWMLALYVLTQ-VLRRV 303 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P +VG + L L T L G + G+ G+ + + L +++ Sbjct: 304 IEPKIVGDTMGLDPLATLLFLYLGFKFNGIAGMVLAVPIGMLFLNLYE 351 >gi|313650953|gb|EFS15353.1| hypothetical protein SF2457T_0579 [Shigella flexneri 2a str. 2457T] Length = 350 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 7 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 66 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPVLMDAG 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 126 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 177 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 235 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 236 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 296 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 342 >gi|331648138|ref|ZP_08349228.1| putative permease PerM [Escherichia coli M605] gi|331684135|ref|ZP_08384731.1| putative permease PerM [Escherichia coli H299] gi|281179544|dbj|BAI55874.1| putative transport protein [Escherichia coli SE15] gi|330912263|gb|EGH40773.1| putative permease PerM ( YfgO) [Escherichia coli AA86] gi|331042998|gb|EGI15138.1| putative permease PerM [Escherichia coli M605] gi|331079087|gb|EGI50289.1| putative permease PerM [Escherichia coli H299] Length = 353 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|111017108|ref|YP_700080.1| hypothetical protein RHA1_ro00086 [Rhodococcus jostii RHA1] gi|110816638|gb|ABG91922.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 478 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 108/319 (33%), Gaps = 15/319 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +G + A + P S + + AV +F++ L + Sbjct: 168 RGVLVLIAVAAFLAIGLEPAVSWLVRH--GFPRWAAVAT------VFVLAFAVLAGFLAA 219 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +V++ + P +L + + LS L+ L + Sbjct: 220 AIPPMVTQGGALVHN---APDYLGHL----EQRYPVLEELSTRFHLQDELRRALDASNAP 272 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + +++ +F D I + L + I + Sbjct: 273 MVVGGLVGAGKFVFSAISGTVIVVVLTAYFLADFAHIRSSIYRLAPNSRRPRTILIGDEI 332 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + LG +I++ ++ VP + L V+ A++ +IP V Sbjct: 333 FAKVGGYVLGNLLISLITAVLTFVWLVAFDVPYPLLLAVLVAVLDLIPVVGSTLAGVVVA 392 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + ++ + ++ D L P ++G +K+P + T ++ G +G++G Sbjct: 393 LVALTVSLLVSLATIVFFIALRLFEDYLLVPRIIGRTVKVPPMVTVVAVLIGGALLGIVG 452 Query: 328 LFIGPVLMALIAVIWKESI 346 + + A + ++ +E++ Sbjct: 453 ALLAIPVAAAVLLLARETV 471 >gi|328554105|gb|AEB24597.1| hypothetical protein BAMTA208_12160 [Bacillus amyloliquefaciens TA208] gi|328912497|gb|AEB64093.1| UPF0118 membrane protein yueF [Bacillus amyloliquefaciens LL3] Length = 356 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 112/311 (36%), Gaps = 10/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P++ + ++ + PI K + + LF++ L + Sbjct: 41 FPPIVLSGVLYYLCRPIVRVLHEKVKLPEGIAILAIYAGTAGLFVLFLYTAGPAVQKQFA 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + W+ + W + H S K ++ +G I Sbjct: 101 AFTDHIPELS---AKAENWIRHL-----QDSKWFSRIQHEDSFKKAADKAANYSGS--IA 150 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S + ++ + AL++ ++G ++L L K+I + + + Sbjct: 151 DSLSSLAGAAANAAITAAIIPFALYYMLKEGNKAPRRLLRLLPEKHQKEGKQILQDMDEA 210 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G +++ G+++ + Y++ G+ + LG + +IP P T + + Sbjct: 211 LSSYIQGQLLVSFCVGVLVTTGYFIIGLDYPLVLGAFAMVTNLIPFIGPWIGTFPGVIVG 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + I + + + P ++G + + L F L+ + G+ G+ + Sbjct: 271 LFDSPTRAVLVVIVVVIVQQLESQLISPQIMGRKLDIHPLTIIFLLLAAGKFSGIAGMLL 330 Query: 331 GPVLMALIAVI 341 A+ VI Sbjct: 331 AIPGYAVAKVI 341 >gi|325290064|ref|YP_004266245.1| protein of unknown function UPF0118 [Syntrophobotulus glycolicus DSM 8271] gi|324965465|gb|ADY56244.1| protein of unknown function UPF0118 [Syntrophobotulus glycolicus DSM 8271] Length = 349 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 113/306 (36%), Gaps = 9/306 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + L++ + P+ +KK +A++ ++F + + + L Sbjct: 31 PFILGLVLAYLLNPLVCWLEAKKIGRKYAIALVFIAI--------IVFFAFVFFVLLPAL 82 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 ++ + + L + S L L + + ++ F Sbjct: 83 YLELSRLSAMLPKMMDNLFKYMESIKLSFLQAGLPGEVIKLYDEKIIYAQGFATRWLVNF 142 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + I + ++ + +F D ++Q + L + W+ + + + +I Sbjct: 143 LNDIPGILVSLT-YLVLSPVLAIYFLADWRRMTQTMIWLVPRKYRNSWRHLLKEINLIIV 201 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + G I A+ G+++G L G + +G+I I +IP P+ S+ L + Sbjct: 202 NYIHGNLIDAVLVGVIIGIGAALLGTEYALLIGIICGITNIIPYFGPLIGAVPSLMLALS 261 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + A + + I I + P L+ + L L F L+ G + GLLG+ + Sbjct: 262 NSPIMAVKILVLILIVQQIDGNLINPKLMSDKVGLRPLTVVFSLLAGEKLAGLLGMLVAI 321 Query: 333 VLMALI 338 L A++ Sbjct: 322 PLTAIM 327 >gi|308048984|ref|YP_003912550.1| hypothetical protein Fbal_1267 [Ferrimonas balearica DSM 9799] gi|307631174|gb|ADN75476.1| protein of unknown function UPF0118 [Ferrimonas balearica DSM 9799] Length = 355 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 106/346 (30%), Gaps = 12/346 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 RE +PQ + +I+ + +YF P+L A++ + + + Sbjct: 10 REKFSDPQAVTLAVILLVGFAVIYFYGSLIMPLLVAVVFAYMLESPVGWMTRQGIPRTLS 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +++ + + + L V LA + V +W + I Sbjct: 70 ASLVLVLFAGLMLVATFGLLPAL-------WRQGVALATELPSMVSQWQNLIMTLPEQYP 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + L T + + + + + I + + +FFF +D Sbjct: 123 TLIDEHQLASLMANFNNSLLST--GQNLVSQSLSSLVDLVALMVYAILVPLLMFFFLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + K++ + I + G I + G ++ + Sbjct: 181 DELMSSFGRFIPD-NRDLAKQVWGEMNVQIGNYIRGKVIEILIIGTASYLTFFFMDLRYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPF 299 LG + + +IP GA + V++ + I + + +D L P Sbjct: 240 ALLGALVGLSVLIPYIGATVVTVPVALVGFFQWGISPEFGYLMLAYGIIQAIDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L + ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPVAIIVAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 345 >gi|229827713|ref|ZP_04453782.1| hypothetical protein GCWU000182_03102 [Abiotrophia defectiva ATCC 49176] gi|229787912|gb|EEP24026.1| hypothetical protein GCWU000182_03102 [Abiotrophia defectiva ATCC 49176] Length = 385 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 112/345 (32%), Gaps = 18/345 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSF-------ISKKEESSTFLAVIATVSVMCLFIVPL 78 + +P+++ LII + P + I + A V + + I+ + Sbjct: 41 VVYKILSPLVTGLIIAYIIDPFVTFLKKTVFADIKNENTKKKLSVTTALVGIAIIIILLM 100 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L ++ ++ V + + L Sbjct: 101 VALIPQIIVSIQTFVKNINTYVES-------LQHFLKTASVEAAKRNIDISGLIRFGDDT 153 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I + + + ++ D + L + + Sbjct: 154 LSMIGRKIPENFNGILNTSISISKAIFDLFIAMFLAIYYLADKDRLKGSFSRLLKRIIKE 213 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA----YWLAGVPSHVALGVITAIMAMI 254 K + S + I +G+++G A +AG+P V + ++ + + Sbjct: 214 DKYKAFAGFWERCNSILIRYIAFDIIDGIIVGVANFIFMSIAGIPYSVLISLVVGVTNLA 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI + ++L+ N +A ++ I I L+P L GG + +P + Sbjct: 274 PTFGPIVGAIIGGFVLVLVNPLHALWFIIFTIILQTIDGYVLKPKLFGGSLGVPGVWILI 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ G R +G+ G+ + A++ I+ + I +E++ Sbjct: 334 SIIVGSRILGVTGILLAIPFAAIVDFIYHDLIFQGARKREELEKQ 378 >gi|15832609|ref|NP_311382.1| permease [Escherichia coli O157:H7 str. Sakai] gi|16130418|ref|NP_416988.1| predicted inner membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|74313019|ref|YP_311438.1| putative permease [Shigella sonnei Ss046] gi|82544940|ref|YP_408887.1| permease [Shigella boydii Sb227] gi|82777872|ref|YP_404221.1| putative permease [Shigella dysenteriae Sd197] gi|89109299|ref|AP_003079.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|157157181|ref|YP_001463815.1| PerM family permease [Escherichia coli E24377A] gi|157161953|ref|YP_001459271.1| PerM family permease [Escherichia coli HS] gi|168748451|ref|ZP_02773473.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4113] gi|168756262|ref|ZP_02781269.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4401] gi|168761099|ref|ZP_02786106.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4501] gi|168768582|ref|ZP_02793589.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4486] gi|168773596|ref|ZP_02798603.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4196] gi|168778456|ref|ZP_02803463.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4076] gi|168787836|ref|ZP_02812843.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC869] gi|168798861|ref|ZP_02823868.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC508] gi|170019223|ref|YP_001724177.1| hypothetical protein EcolC_1183 [Escherichia coli ATCC 8739] gi|170082103|ref|YP_001731423.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170684284|ref|YP_001744676.1| PerM family permease [Escherichia coli SMS-3-5] gi|187731235|ref|YP_001881284.1| putative permease, PerM family [Shigella boydii CDC 3083-94] gi|188494088|ref|ZP_03001358.1| putative permease, PerM family [Escherichia coli 53638] gi|191169210|ref|ZP_03030965.1| putative permease, PerM family [Escherichia coli B7A] gi|193064715|ref|ZP_03045793.1| putative permease, PerM family [Escherichia coli E22] gi|193068364|ref|ZP_03049327.1| putative permease, PerM family [Escherichia coli E110019] gi|194427318|ref|ZP_03059868.1| putative permease, PerM family [Escherichia coli B171] gi|194432082|ref|ZP_03064371.1| putative permease, PerM family [Shigella dysenteriae 1012] gi|194437683|ref|ZP_03069779.1| putative permease, PerM family [Escherichia coli 101-1] gi|195936636|ref|ZP_03082018.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807106|ref|ZP_03249443.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4206] gi|208813929|ref|ZP_03255258.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4045] gi|208818576|ref|ZP_03258896.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4042] gi|209395768|ref|YP_002271962.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4115] gi|209919969|ref|YP_002294053.1| putative transport protein [Escherichia coli SE11] gi|217327918|ref|ZP_03444001.1| permease, PerM family [Escherichia coli O157:H7 str. TW14588] gi|218555018|ref|YP_002387931.1| putative permease [Escherichia coli IAI1] gi|218696120|ref|YP_002403787.1| putative permease [Escherichia coli 55989] gi|218700950|ref|YP_002408579.1| putative permease [Escherichia coli IAI39] gi|218705992|ref|YP_002413511.1| putative permease [Escherichia coli UMN026] gi|238901658|ref|YP_002927454.1| putative inner membrane protein [Escherichia coli BW2952] gi|253772615|ref|YP_003035446.1| hypothetical protein ECBD_1195 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162467|ref|YP_003045575.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|254794438|ref|YP_003079275.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256017359|ref|ZP_05431224.1| predicted inner membrane protein [Shigella sp. D9] gi|256021821|ref|ZP_05435686.1| predicted inner membrane protein [Escherichia sp. 4_1_40B] gi|260845123|ref|YP_003222901.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260856587|ref|YP_003230478.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260869182|ref|YP_003235584.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261223074|ref|ZP_05937355.1| predicted inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259374|ref|ZP_05951907.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291283713|ref|YP_003500531.1| putative permease perM [Escherichia coli O55:H7 str. CB9615] gi|293405929|ref|ZP_06649921.1| permease PerM [Escherichia coli FVEC1412] gi|293410888|ref|ZP_06654464.1| conserved hypothetical protein [Escherichia coli B354] gi|293415756|ref|ZP_06658399.1| permease PerM [Escherichia coli B185] gi|293446846|ref|ZP_06663268.1| permease [Escherichia coli B088] gi|298381677|ref|ZP_06991276.1| permease [Escherichia coli FVEC1302] gi|300820841|ref|ZP_07100991.1| hypothetical protein HMPREF9346_00654 [Escherichia coli MS 119-7] gi|300897626|ref|ZP_07116031.1| hypothetical protein HMPREF9552_01838 [Escherichia coli MS 198-1] gi|300921425|ref|ZP_07137785.1| hypothetical protein HMPREF9540_05041 [Escherichia coli MS 115-1] gi|300922199|ref|ZP_07138335.1| hypothetical protein HMPREF9548_00476 [Escherichia coli MS 182-1] gi|300930130|ref|ZP_07145552.1| hypothetical protein HMPREF9550_02421 [Escherichia coli MS 187-1] gi|300940265|ref|ZP_07154862.1| hypothetical protein HMPREF9530_05022 [Escherichia coli MS 21-1] gi|300951805|ref|ZP_07165619.1| hypothetical protein HMPREF9541_05109 [Escherichia coli MS 116-1] gi|300958880|ref|ZP_07170986.1| hypothetical protein HMPREF9547_04570 [Escherichia coli MS 175-1] gi|301023878|ref|ZP_07187609.1| hypothetical protein HMPREF9551_02146 [Escherichia coli MS 196-1] gi|301024715|ref|ZP_07188358.1| hypothetical protein HMPREF9534_04007 [Escherichia coli MS 69-1] gi|301329015|ref|ZP_07222042.1| hypothetical protein HMPREF9535_03707 [Escherichia coli MS 78-1] gi|301644483|ref|ZP_07244480.1| hypothetical protein HMPREF9543_01134 [Escherichia coli MS 146-1] gi|307139127|ref|ZP_07498483.1| putative permease perM [Escherichia coli H736] gi|307312513|ref|ZP_07592146.1| protein of unknown function UPF0118 [Escherichia coli W] gi|309784770|ref|ZP_07679403.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309794463|ref|ZP_07688886.1| hypothetical protein HMPREF9348_01654 [Escherichia coli MS 145-7] gi|312973269|ref|ZP_07787441.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643110|ref|ZP_08344245.1| putative permease PerM [Escherichia coli H736] gi|331653918|ref|ZP_08354919.1| putative permease PerM [Escherichia coli M718] gi|331669235|ref|ZP_08370083.1| putative permease PerM [Escherichia coli TA271] gi|331678480|ref|ZP_08379155.1| putative permease PerM [Escherichia coli H591] gi|84028850|sp|P0AFJ0|PERM_ECO57 RecName: Full=Putative permease perM gi|84028929|sp|P0AFI9|PERM_ECOLI RecName: Full=Putative permease perM gi|1788838|gb|AAC75546.1| predicted inner membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|1805554|dbj|BAA16382.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|13362825|dbj|BAB36778.1| putative permease [Escherichia coli O157:H7 str. Sakai] gi|73856496|gb|AAZ89203.1| putative permease [Shigella sonnei Ss046] gi|81242020|gb|ABB62730.1| putative permease [Shigella dysenteriae Sd197] gi|81246351|gb|ABB67059.1| putative permease [Shigella boydii Sb227] gi|157067633|gb|ABV06888.1| putative permease, PerM family [Escherichia coli HS] gi|157079211|gb|ABV18919.1| putative permease, PerM family [Escherichia coli E24377A] gi|169754151|gb|ACA76850.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|169889938|gb|ACB03645.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170522002|gb|ACB20180.1| putative permease, PerM family [Escherichia coli SMS-3-5] gi|187428227|gb|ACD07501.1| putative permease, PerM family [Shigella boydii CDC 3083-94] gi|187770714|gb|EDU34558.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4196] gi|188017034|gb|EDU55156.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4113] gi|188489287|gb|EDU64390.1| putative permease, PerM family [Escherichia coli 53638] gi|189003164|gb|EDU72150.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4076] gi|189356636|gb|EDU75055.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4401] gi|189362303|gb|EDU80722.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4486] gi|189368419|gb|EDU86835.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4501] gi|189372357|gb|EDU90773.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC869] gi|189378577|gb|EDU96993.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC508] gi|190900755|gb|EDV60549.1| putative permease, PerM family [Escherichia coli B7A] gi|192927598|gb|EDV82214.1| putative permease, PerM family [Escherichia coli E22] gi|192958316|gb|EDV88756.1| putative permease, PerM family [Escherichia coli E110019] gi|194414639|gb|EDX30911.1| putative permease, PerM family [Escherichia coli B171] gi|194419611|gb|EDX35691.1| putative permease, PerM family [Shigella dysenteriae 1012] gi|194423489|gb|EDX39480.1| putative permease, PerM family [Escherichia coli 101-1] gi|208726907|gb|EDZ76508.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4206] gi|208735206|gb|EDZ83893.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4045] gi|208738699|gb|EDZ86381.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4042] gi|209157168|gb|ACI34601.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4115] gi|209763588|gb|ACI80106.1| putative permease [Escherichia coli] gi|209763590|gb|ACI80107.1| putative permease [Escherichia coli] gi|209763592|gb|ACI80108.1| putative permease [Escherichia coli] gi|209763594|gb|ACI80109.1| putative permease [Escherichia coli] gi|209763596|gb|ACI80110.1| putative permease [Escherichia coli] gi|209913228|dbj|BAG78302.1| putative transport protein [Escherichia coli SE11] gi|217320285|gb|EEC28710.1| permease, PerM family [Escherichia coli O157:H7 str. TW14588] gi|218352852|emb|CAU98651.1| putative permease [Escherichia coli 55989] gi|218361786|emb|CAQ99385.1| putative permease [Escherichia coli IAI1] gi|218370936|emb|CAR18757.1| putative permease [Escherichia coli IAI39] gi|218433089|emb|CAR13984.1| putative permease [Escherichia coli UMN026] gi|238862515|gb|ACR64513.1| predicted inner membrane protein [Escherichia coli BW2952] gi|242378091|emb|CAQ32864.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|253323659|gb|ACT28261.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974368|gb|ACT40039.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253978535|gb|ACT44205.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|254593838|gb|ACT73199.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257755236|dbj|BAI26738.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257760270|dbj|BAI31767.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257765538|dbj|BAI37033.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|260448428|gb|ACX38850.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|284922440|emb|CBG35527.1| putative permease [Escherichia coli 042] gi|290763586|gb|ADD57547.1| Putative permease perM [Escherichia coli O55:H7 str. CB9615] gi|291323676|gb|EFE63104.1| permease [Escherichia coli B088] gi|291428137|gb|EFF01164.1| permease PerM [Escherichia coli FVEC1412] gi|291433404|gb|EFF06383.1| permease PerM [Escherichia coli B185] gi|291471356|gb|EFF13840.1| conserved hypothetical protein [Escherichia coli B354] gi|298279119|gb|EFI20633.1| permease [Escherichia coli FVEC1302] gi|299880632|gb|EFI88843.1| hypothetical protein HMPREF9551_02146 [Escherichia coli MS 196-1] gi|300314482|gb|EFJ64266.1| hypothetical protein HMPREF9547_04570 [Escherichia coli MS 175-1] gi|300358626|gb|EFJ74496.1| hypothetical protein HMPREF9552_01838 [Escherichia coli MS 198-1] gi|300396446|gb|EFJ79984.1| hypothetical protein HMPREF9534_04007 [Escherichia coli MS 69-1] gi|300411659|gb|EFJ94969.1| hypothetical protein HMPREF9540_05041 [Escherichia coli MS 115-1] gi|300421438|gb|EFK04749.1| hypothetical protein HMPREF9548_00476 [Escherichia coli MS 182-1] gi|300448968|gb|EFK12588.1| hypothetical protein HMPREF9541_05109 [Escherichia coli MS 116-1] gi|300454906|gb|EFK18399.1| hypothetical protein HMPREF9530_05022 [Escherichia coli MS 21-1] gi|300461974|gb|EFK25467.1| hypothetical protein HMPREF9550_02421 [Escherichia coli MS 187-1] gi|300526594|gb|EFK47663.1| hypothetical protein HMPREF9346_00654 [Escherichia coli MS 119-7] gi|300844649|gb|EFK72409.1| hypothetical protein HMPREF9535_03707 [Escherichia coli MS 78-1] gi|301077228|gb|EFK92034.1| hypothetical protein HMPREF9543_01134 [Escherichia coli MS 146-1] gi|306907436|gb|EFN37940.1| protein of unknown function UPF0118 [Escherichia coli W] gi|308121919|gb|EFO59181.1| hypothetical protein HMPREF9348_01654 [Escherichia coli MS 145-7] gi|308927140|gb|EFP72614.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309702771|emb|CBJ02102.1| putative permease [Escherichia coli ETEC H10407] gi|310331864|gb|EFP99099.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|315061811|gb|ADT76138.1| predicted inner membrane protein [Escherichia coli W] gi|315137116|dbj|BAJ44275.1| putative permease perM [Escherichia coli DH1] gi|315615736|gb|EFU96368.1| conserved hypothetical protein [Escherichia coli 3431] gi|320176259|gb|EFW51320.1| hypothetical protein SDB_01232 [Shigella dysenteriae CDC 74-1112] gi|320180479|gb|EFW55410.1| hypothetical protein SGB_02379 [Shigella boydii ATCC 9905] gi|320185191|gb|EFW59971.1| hypothetical protein SGF_02727 [Shigella flexneri CDC 796-83] gi|320188825|gb|EFW63484.1| hypothetical protein ECoD_03818 [Escherichia coli O157:H7 str. EC1212] gi|320200054|gb|EFW74643.1| hypothetical protein ECoL_02890 [Escherichia coli EC4100B] gi|320640997|gb|EFX10481.1| putative permease perM [Escherichia coli O157:H7 str. G5101] gi|320646279|gb|EFX15206.1| putative permease perM [Escherichia coli O157:H- str. 493-89] gi|320651784|gb|EFX20164.1| putative permease perM [Escherichia coli O157:H- str. H 2687] gi|320657170|gb|EFX24979.1| putative permease perM [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662776|gb|EFX30108.1| putative permease perM [Escherichia coli O55:H7 str. USDA 5905] gi|320667580|gb|EFX34495.1| putative permease perM [Escherichia coli O157:H7 str. LSU-61] gi|323156097|gb|EFZ42256.1| hypothetical protein ECEPECA14_1872 [Escherichia coli EPECa14] gi|323159346|gb|EFZ45331.1| hypothetical protein ECE128010_4397 [Escherichia coli E128010] gi|323169065|gb|EFZ54742.1| hypothetical protein SS53G_0606 [Shigella sonnei 53G] gi|323170238|gb|EFZ55891.1| hypothetical protein ECLT68_5126 [Escherichia coli LT-68] gi|323177386|gb|EFZ62974.1| hypothetical protein ECOK1180_3872 [Escherichia coli 1180] gi|323184449|gb|EFZ69824.1| hypothetical protein ECOK1357_2170 [Escherichia coli 1357] gi|323377608|gb|ADX49876.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323936385|gb|EGB32675.1| hypothetical protein ERCG_02401 [Escherichia coli E1520] gi|323944714|gb|EGB40781.1| hypothetical protein EREG_03729 [Escherichia coli H120] gi|323961287|gb|EGB56899.1| hypothetical protein ERGG_02238 [Escherichia coli H489] gi|323970985|gb|EGB66234.1| hypothetical protein ERHG_02956 [Escherichia coli TA007] gi|324020093|gb|EGB89312.1| hypothetical protein HMPREF9542_01215 [Escherichia coli MS 117-3] gi|324118163|gb|EGC12060.1| hypothetical protein ERBG_01897 [Escherichia coli E1167] gi|326340288|gb|EGD64092.1| hypothetical protein ECF_04004 [Escherichia coli O157:H7 str. 1125] gi|326344973|gb|EGD68717.1| permease PerM [Escherichia coli O157:H7 str. 1044] gi|331039908|gb|EGI12128.1| putative permease PerM [Escherichia coli H736] gi|331048767|gb|EGI20843.1| putative permease PerM [Escherichia coli M718] gi|331064429|gb|EGI36340.1| putative permease PerM [Escherichia coli TA271] gi|331074940|gb|EGI46260.1| putative permease PerM [Escherichia coli H591] gi|332087939|gb|EGI93064.1| hypothetical protein SB521682_2872 [Shigella boydii 5216-82] gi|332089723|gb|EGI94824.1| hypothetical protein SD15574_2893 [Shigella dysenteriae 155-74] gi|332092738|gb|EGI97807.1| hypothetical protein SB359474_2899 [Shigella boydii 3594-74] gi|332100710|gb|EGJ04056.1| PerM family permease [Shigella sp. D9] Length = 353 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|326789823|ref|YP_004307644.1| hypothetical protein Clole_0713 [Clostridium lentocellum DSM 5427] gi|326540587|gb|ADZ82446.1| protein of unknown function UPF0118 [Clostridium lentocellum DSM 5427] Length = 417 Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 116/356 (32%), Gaps = 27/356 (7%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIY--------SSFISKKEESSTFLAVIATVSVM 71 IL + AP+L L+I + PI F + I+ V+V Sbjct: 41 ILAFFKGIISIIAPILYGLLIAYLFNPIMIFFENYFIKWFKPSTVNQKKAIRSISIVAVY 100 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLA------------NQHGIPVPRWLSDIPGGMWA 119 I ++ +F Y + ++ E + + A N V + +S +P + Sbjct: 101 ICIIGTVILMFRYLVPQITENIKDLSAALPDYANNLEEKINALEKSVNQSISGLPYQLDT 160 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S+++T T N + + A ++ + ++ L Sbjct: 161 SQVFTMIDPA-----KYLNTDFLGNIVSNLMGQAMSIVSSLFNWVMGLVIAFYVLMQKES 215 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +L + ++ F+G I + G + + P Sbjct: 216 FSYGTKRLCYTLLSRQKADKLIAVFSEGHEIFIKFFVGKFIDSFIIGAICFVGLSILDNP 275 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I ++ MIP G + I L G A + ++ + L P Sbjct: 276 YAILLSFIVGVLNMIPYFGPLLGAIPAVIITLFTG-FMPAVVVGIFIFLLQQFDGLVLGP 334 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++G I L G++ G G LG+F ++A++ + + K+ Sbjct: 335 KILGDSIGLSPFWIISGILIGGALWGPLGMFFASPIIAVLLKNLNRYMDRVLSQKD 390 >gi|323941248|gb|EGB37433.1| hypothetical protein ERDG_02162 [Escherichia coli E482] Length = 353 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFATTLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|238651085|ref|YP_002916943.1| putative permease PerM-like protein [Rickettsia peacockii str. Rustic] gi|238625183|gb|ACR47889.1| putative permease PerM-like protein [Rickettsia peacockii str. Rustic] Length = 351 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 119/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|57339636|gb|AAW49805.1| hypothetical protein FTT0479 [synthetic construct] Length = 403 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + V+ Sbjct: 42 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 98 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 99 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRI 158 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 159 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 218 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 219 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 277 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 278 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L + K + N Sbjct: 338 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADINL 393 >gi|306833392|ref|ZP_07466519.1| probable permease [Streptococcus bovis ATCC 700338] gi|304424162|gb|EFM27301.1| probable permease [Streptococcus bovis ATCC 700338] Length = 372 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 122/331 (36%), Gaps = 12/331 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV---IATVSVMCLFIVPLLFLFYYG 85 F A I+ +Y ++ ++ L I+ + FI+ + +LF Sbjct: 41 PFLIGAGIAYIVNIVMS-LYEMLYTRVIKNRILLKAKRAISMILAYLTFILLISWLFSIV 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++ ++ + G V ++ ++ A++ + + + + + Sbjct: 100 LPDLISSINSLLKIDTTG--VANFIKEV-SDNKATKELLDYFGNSSDITSTFSEYSQQIL 156 Query: 146 IDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + L++ ++ + + +Q + L + Y +K+ Sbjct: 157 NQVLSVLTGLLTSVSTIASTVLTVFVSLVFSIYVLASKEQLGRQFNLLIDTYLGTYAEKV 216 Query: 204 ---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I+ F+G T+ A+ G + + +L P +G++ A A+IP Sbjct: 217 HYVLDILHLRFHGFFVGQTLEAMILGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAY 276 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 277 IGATIGFILIATQSVSQAFLFLVYLVVLQQFEGNIIYPRVVGGSIGLPGMWVLMAITIGG 336 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+LG+ + L A + I K+++ ++ Sbjct: 337 ALWGILGMLVAVPLAASLYQIIKDNVAKRQQ 367 >gi|239996076|ref|ZP_04716600.1| putative permease [Alteromonas macleodii ATCC 27126] Length = 357 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 113/359 (31%), Gaps = 14/359 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P M +++ + L G PVL A +I + WP+ + S T Sbjct: 10 RRKFSDPDAAMLLILILLTTAVLLLWGGLIMPVLVAAVIAYLLDWPVCR--LVNVGVSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ + + + I+ L+ L + L+ + L Q W+ +P Sbjct: 68 LACVVVMLGFITITILTLIGLVPIISKQSVNLIQETPLIWQK---AQEWILTLPDKYPDY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L +T A + +I + + +FF +D Sbjct: 125 VQVYQIHQMMEGLNDKLVEVGETLISASFSNIA-----NLAALLVYVILVPLMVFFMLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L ++ + I + G I I G V + L + Sbjct: 180 KLFFLDSISRLLPKERRL-ITQVGHEMNSQIANYIRGKVIEIIIVGAVSCVTFVLMDLRY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRP 298 + LGV+ +IP GA + V++ + + I L + I + L P Sbjct: 239 AILLGVLVGFSVLIPYIGAAVVTIPVAVVAMFQWGISPEFWYLMIAYGIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L L ++ G G+F L L+ + E+ Sbjct: 299 LLFSEAVSLHPLYIIVAVLVFGGLWGFWGVFFAIPLATLVKAVITAWSSNPVIVPEEAK 357 >gi|67458793|ref|YP_246417.1| permease PerM-like protein [Rickettsia felis URRWXCal2] gi|67004326|gb|AAY61252.1| Permease PerM homolog [Rickettsia felis URRWXCal2] Length = 351 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 122/352 (34%), Gaps = 11/352 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L + ++ + +L +++++ Sbjct: 61 IYLIFLSIFFLSLTILVPI-------IYGQIFTFINNIPKYKNYLQAEILPPIMAKIYSI 113 Query: 126 HLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +K F+ + + I R+ +I ++ + + + I LF+F RD Sbjct: 114 EPDIADKIKNSLSDFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + SL +I + ++ + G I + A+ + G+ + Sbjct: 174 IIANMKSLLPIKTRPKTLEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALL 233 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++T + +IP + I L G + + + L P ++ Sbjct: 234 LGILTGFLVIIPFLGTFISFLLTLIIGYLNFGVTSKLLYIMIIYLVGNICESYILTPKII 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L L F + G++G+F + + ++ I K +K Sbjct: 294 GDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|300903504|ref|ZP_07121429.1| hypothetical protein HMPREF9536_01636 [Escherichia coli MS 84-1] gi|301302846|ref|ZP_07208974.1| hypothetical protein HMPREF9347_01424 [Escherichia coli MS 124-1] gi|331664050|ref|ZP_08364960.1| putative permease PerM [Escherichia coli TA143] gi|300404536|gb|EFJ88074.1| hypothetical protein HMPREF9536_01636 [Escherichia coli MS 84-1] gi|300841781|gb|EFK69541.1| hypothetical protein HMPREF9347_01424 [Escherichia coli MS 124-1] gi|315256510|gb|EFU36478.1| permease, PerM family [Escherichia coli MS 85-1] gi|331059849|gb|EGI31826.1| putative permease PerM [Escherichia coli TA143] Length = 353 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|152965066|ref|YP_001360850.1| hypothetical protein Krad_1098 [Kineococcus radiotolerans SRS30216] gi|151359583|gb|ABS02586.1| protein of unknown function UPF0118 [Kineococcus radiotolerans SRS30216] Length = 396 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 70/197 (35%), Gaps = 1/197 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ D I A+ + A FF+ +G I L L Sbjct: 149 SDNRDAIVAGATTVAATAGHLVAGFFITLFATFFYLLEGRRIWSWLLHLMPQPARDPLDD 208 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 +R + ++A+ +G + + VP V LG++ + A IP GA +S Sbjct: 209 AARQSWLTLVHYMRATVVVALVDGAGVAIGAAVLQVPLAVPLGLVVFLGAFIPIVGALLS 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L+ A + + + L+PFL+G + + L + G Sbjct: 269 GVVAVLVALVAQGPVIALIMLGVILLVQQVESHLLQPFLMGRAVAVHPLAVILSVAAGAT 328 Query: 322 TMGLLGLFIGPVLMALI 338 G++G L+A++ Sbjct: 329 VFGIVGALFAVPLVAVL 345 >gi|134299818|ref|YP_001113314.1| hypothetical protein Dred_1971 [Desulfotomaculum reducens MI-1] gi|134052518|gb|ABO50489.1| protein of unknown function UPF0118 [Desulfotomaculum reducens MI-1] Length = 362 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 107/326 (32%), Gaps = 4/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P + A+ I F P+ +K S ++ ++ F+ + L Sbjct: 38 FIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMFLLIIFFVTIISLLLLRL 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E+ L + Q +P +S+ S N Sbjct: 98 ITELINLSKSIPFIIQEIQYWVE--KSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNL 155 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + II +A +F +D S++ + + + Sbjct: 156 LAAALDTLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIK 215 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V S I+ + S ++ G + +G++ +IP G Sbjct: 216 EVFNAFISYIKAQGILVSISTFISISGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILP 275 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ +I G I L + I + + + L +V + L L T L G R +G Sbjct: 276 WIVWSIISGEIAFGLKLLVLY-IVILVARQLLETKVVADNLGLHPLATLVALFFGFRILG 334 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 +G+ +GP+L+ I I K I + + Sbjct: 335 FVGMIVGPILLIAIQAIVKAGIQSPR 360 >gi|219682959|ref|YP_002469342.1| hypothetical protein BLA_0467 [Bifidobacterium animalis subsp. lactis AD011] gi|219620609|gb|ACL28766.1| putative membrane protein [Bifidobacterium animalis subsp. lactis AD011] Length = 519 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 97/319 (30%), Gaps = 15/319 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ AL + P+ I +V ++ + IV + + +M +V Sbjct: 49 IVIALFLALAVEPLVIRLIRH-GWKRGVASVTCLAGLLVIVIVLMALFGNMFVQQMISMV 107 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + L L +K + + A Sbjct: 108 KGLPDLYNQFAAFVDAKTHFK------------LPEMNDLGGEIMKNIKGSWVTDFAGQA 155 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 M L L++ ++ F+ G + + + + + +V I Sbjct: 156 VSTTMGVLGQILNLTTALMVAFYISIAGPKLRRSVCQWIAPRSQRRFLMVWTVVQDQISG 215 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLI 271 +I+A + + VP + L + I++ +P G I ++ Sbjct: 216 FLFSRSILAAINAACMSVFLMIIKVPYWLPLALFCGIVSQFVPTLGTYIGGALPVLFAWG 275 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + I A + ++ + I + L P + + L F ++ G G F+ Sbjct: 276 ERGIGYAIGVVVFITVYQQIENLVLSPKISERTMDLNPCIAFLTVLFFGSIFGAAGAFLA 335 Query: 332 PVLMALIAVIWKESIMAIK 350 + A I V+ K ++ Sbjct: 336 LPITASIQVLLKVAMKRYP 354 >gi|60680148|ref|YP_210292.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|265765290|ref|ZP_06093565.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60491582|emb|CAH06334.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|263254674|gb|EEZ26108.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 379 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 128/365 (35%), Gaps = 20/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R I ++V L L G P A +I + +P+ F K Sbjct: 1 MERKKITFDSFIRGSICCALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYY-GMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S +++ + + + + L +L + EM + +V +G S Sbjct: 61 FKSRIISIFCALFSITIVGISLFYLLVPPMLAEMGRMNDLLVTYLTNGAY-----SSGTV 115 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMII 172 SE KH+ +ILSE + + +P+ + I S I ++ Sbjct: 116 PPTLSEFIHKHIDLQALNRILSEENIMNTIKETVPKLWALVAESINILFSVFASFIILLY 175 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F D SI++ L + + + + + F G +A G++ Sbjct: 176 VVFILL-DYESIAEGWLHLLPGKYRTFASNLVNDIQDGMNRYFRGQAFVAFCVGILFSIG 234 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P +ALG+ + M+P I F + ++ G F + Sbjct: 235 FLIIDFPMAIALGLFIGALNMVPYLQIIGFLPTIVLAILKAADTGENFWVILAGALIVFI 294 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D L P ++G L L +G+LG+ I L L+ ++ I Sbjct: 295 VVQAIQDGFLVPRIMGKITGLNPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFI 354 Query: 347 MAIKE 351 + ++ Sbjct: 355 INKEK 359 >gi|222152996|ref|YP_002562173.1| membrane protein [Streptococcus uberis 0140J] gi|222113809|emb|CAR41881.1| putative membrane protein [Streptococcus uberis 0140J] Length = 374 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 118/333 (35%), Gaps = 6/333 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F A I+ Y +S+ + + +S++ + + LF+ + Sbjct: 40 LPFLYGAALAYIVNIVMS-AYEKLLSRFLRGNHLFHLKRAISMILAYFTFIAILFWIVSI 98 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +L++ + + L A ++ + + + Sbjct: 99 VIPDLIASINTMMSFDTSSIKELIRDLSHNKALARLINYVGGDAQVTKTISNYSQQLLRQ 158 Query: 148 FIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI-- 203 F+ + + L +++ + + + + +Q + L + Y ++I Sbjct: 159 FLSVLTNILTSVTLIASAIINVFVAFVFSLYVLGNKEQLCRQGNLLVDTYAGKYAQRIHY 218 Query: 204 -SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ R F+ TI A+ G + +L +P +GV+ A A++P Sbjct: 219 LVELLHDRFRGFFVSQTIEAMILGSLTAVGMFLFKLPFAATIGVLVAFTALLPVVGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L++ ++ A ++ I + P +VGG I LP + + G Sbjct: 279 VTIGFVLIMTQSLSQAIFFVIFLIILQQFEGNLIYPRVVGGSIGLPAMWVLMAITIGASL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ I L A + +++I + ++K Sbjct: 339 RGVVGMIIAVPLAATCYQMIRDNIEKKQAIQKK 371 >gi|294011289|ref|YP_003544749.1| putative permease [Sphingobium japonicum UT26S] gi|292674619|dbj|BAI96137.1| putative permease [Sphingobium japonicum UT26S] Length = 384 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 115/315 (36%), Gaps = 13/315 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P+ +AL+I P + S A+ A ++ + + L+ + Sbjct: 42 FFLPLTAALVIAIALVPFLEWMERRSVPSP-LAALTAVIAFLLVANTALVLIVVPAADWF 100 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + L ++ + P+ + S + + E + P + + + + F Sbjct: 101 RLLPERLPKIQNNLAPLIDFYSQL--QRFVDETVQMLATGPVAAAQTAAVDAPRSLLQFA 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGEHLFPAYWKKISRIVP 208 A + ++F ++ ++FF + ++ ++S G ++ + V Sbjct: 159 ATSAPA-------AIIQMVFALLIIYFFLAGWTRLRRRTINSRGSFDGAMAVARVIQNVV 211 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVS 266 + L + I + GL + A WL G+PS + G I A++ +P P+ + Sbjct: 212 DATSAYVLTIATINLCLGLAVAFALWLIGMPSPLMWGGIVALLNFVPYFGPMLAAALLAL 271 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L++ +++ A + + P ++G + + L L G Sbjct: 272 GGLMVFDDVWRALLPAALQVGFHLVEANVVTPTILGRRLTMNPLLILVSLTFWGWVWGTP 331 Query: 327 GLFIGPVLMALIAVI 341 G +G L+ +I + Sbjct: 332 GALLGVPLLIIIQTV 346 >gi|114321629|ref|YP_743312.1| hypothetical protein Mlg_2482 [Alkalilimnicola ehrlichii MLHE-1] gi|114228023|gb|ABI57822.1| protein of unknown function UPF0118 [Alkalilimnicola ehrlichii MLHE-1] Length = 359 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 106/326 (32%), Gaps = 11/326 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 APVL++L++ + + +V +F+ FL ++ Sbjct: 38 LAPVLASLVLAYLLEGFVRYLERWRVPR--------LAAVTVVFLSFTAFLLALFLVLFP 89 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++V + + + + + + + L + Sbjct: 90 VLYRQLVQLVEQLPAILARGQALLLQLPEHYPQLFSEAQMREIIDGLRRELIDWAQRVVT 149 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F+ + ++ + + ++ + +FFF +D + Q L ++ R V Sbjct: 150 SFSFQSVVVIVTLLVYMVLVPFMVFFFLKDKRLMLQWLSDHLPRDRGL-ASEVWREVDLQ 208 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I + G + I V + L G+ + L V+ + ++P GA + V+I Sbjct: 209 IGNYVRGKFVEIIIVWAVTFITFSLFGLQFAMLLAVMVGLSVIVPYVGAAVVTLPVAIIA 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + + +D L P L + L + ++ G G+ Sbjct: 269 YFQWGVSPEFAWLMVAYFIIQALDGNVLVPLLFSEAVNLHPVAIIVAILVFGGVWGFWGV 328 Query: 329 FIGPVLMALIAVIWKESIMAIKENKE 354 F L LI + K A ++ Sbjct: 329 FFAIPLATLIQAVIKAWPSAASHREQ 354 >gi|13476595|ref|NP_108165.1| putative permease [Mesorhizobium loti MAFF303099] gi|14027357|dbj|BAB53626.1| putative permease [Mesorhizobium loti MAFF303099] Length = 366 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 107/316 (33%), Gaps = 13/316 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + LY P ++ +++ + P+ + S V+ ++ + + ++ + Sbjct: 7 LALFLYMFSNILLPFVAGMVLAYFLDPVADRL-QRLGLSRFMATVVILITFLIVLVLAFV 65 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L +M + K+ L + L K + L+ + Sbjct: 66 ILIPVLATQMADFAGKLPEYLTR-------LQSLITSFDPKWLEQKFGVNANGLRDGLNS 118 Query: 140 FLKTNGIDFIPRFASRF--GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + F S + G+ + + + F+ D + +DS Sbjct: 119 LLTSGFGLLTTVFTSIWSSGVALVSVVSLFVVTPVVAFYMLLDWDRMVAVIDSWVPRDNV 178 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A + I+R + G + + G + + L G+ + +G+ +++ IP Sbjct: 179 ATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPYV 238 Query: 258 APISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 ++ +++ + + + + I FI L+P LVG + L + F Sbjct: 239 GSLTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMF 298 Query: 315 GLVGGVRTMGLLGLFI 330 L G +GL I Sbjct: 299 ALFAFGALFGFVGLLI 314 >gi|324008590|gb|EGB77809.1| permease, PerM family [Escherichia coli MS 57-2] Length = 353 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFSIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRPW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|15615171|ref|NP_243474.1| hypothetical protein BH2608 [Bacillus halodurans C-125] gi|10175229|dbj|BAB06327.1| BH2608 [Bacillus halodurans C-125] Length = 352 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 118/333 (35%), Gaps = 2/333 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + I++++ YF+ P+++ALI P K + F ++ Sbjct: 6 TKRNVLIALTILILVIAAYFILPVSLPLVAALITAMILSPAVHYLHVKTKLKRNFSVMVV 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +CL + ++ + + +V + + Sbjct: 66 FTLFVCLIGLCGYYVVTTVITQGVTIVENIPQYINDINRAWLLFQRDLEHRYEDLPPEFV 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + Y ++II +IALF F + + + Sbjct: 126 YEINLQVTDTLNKLRQDLADRDWIGDITSLVTSVPGYLVTIIVYLIALFLFMLELPRLKE 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ S +S + V+ +++I +V L + + Sbjct: 186 KVYSYLSEKTQDKVSFMSSRLSYVVSGFIKAQFLVSIIIFVVSLVGLLLIVPEYALLMAF 245 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ IP G+ +++ LI GN+ T L + A L I+ +T+ P ++G I Sbjct: 246 VIWIIDFIPIIGSIAILGPWALFQLIAGNVAVGTQLLIL-AAILLIIRRTVEPKVMGQHI 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L T + G+ G++G +GP+++ Sbjct: 305 GLSPLATLIAMYIGLMLFGVVGFIVGPLIVIAF 337 >gi|307692769|ref|ZP_07635006.1| hypothetical protein RbacD_07268 [Ruminococcaceae bacterium D16] Length = 386 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 115/321 (35%), Gaps = 6/321 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L AP ++ALI P+ S +++ V + L L L Y Sbjct: 39 LLSLLAPFVAALITAAILHPVVRWLRDTLGGSRKLWSLLVLVLLFGLMGAALGGLVYAAG 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ LV + + + L I W + + + E T Sbjct: 99 AQLISLVQSWDDLLANLEGIFQQLEQIFARFWDLVPPALNETVDSVWDSVLEWLKNTLPG 158 Query: 147 DF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + +A + + L++I I+A + D + + A+ ++ Sbjct: 159 MLEGLVNYAKDKALSLPSFGLALIIYIMASYLLTADYPDLRTAAARRTDRRLLAFLIQVR 218 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 ++++G +L +++ P + L ++ A+M IP GA Sbjct: 219 DTALAAFGGYLKAEFLLSVGVFFILLGGFFIIHQPYGLLLALVLAVMDFIPIIGAGTVMV 278 Query: 264 AVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L GN+ A + +WG I LF + P VG L + + + G+R Sbjct: 279 PWAVIDLFTGNLGGAIRLMVIWGLIALFR--RVGEPKFVGDQTGLSPILSLVSIYVGMRL 336 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 G+LG+ +GP ++ + + K Sbjct: 337 GGVLGMILGPTVLLIALNLVK 357 >gi|261253578|ref|ZP_05946151.1| permease PerM [Vibrio orientalis CIP 102891] gi|260936969|gb|EEX92958.1| permease PerM [Vibrio orientalis CIP 102891] Length = 354 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 124/348 (35%), Gaps = 14/348 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ +S+ T ++ Sbjct: 15 DPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVVQ--LSRVGIPRTLAVIL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L IV + L ++ L++ + + + ++S++P + Sbjct: 73 VILGFISLMIVAIFGLVPTIWQQVGNLINDIPTMY---VGLQGFISELPH----RYPELE 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +SL ++ + G + + + + +I + + +FF +D + Sbjct: 126 NFQIVESLVTNAKNQVIGMGETVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKEEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 EMASGMLPR-NRRLANKVWHEMNEQISNYIRGKVMEILIVGSVSYITFAILDLRYAVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA V+I L G L + I + L P L Sbjct: 244 VAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L L+ +W +E Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHEEE 351 >gi|77360080|ref|YP_339655.1| permease (PerM) [Pseudoalteromonas haloplanktis TAC125] gi|76874991|emb|CAI86212.1| putative permease (PerM family) [Pseudoalteromonas haloplanktis TAC125] Length = 357 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 117/348 (33%), Gaps = 14/348 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++ ++ LYF+ PVL ALII + WP+ + + VI Sbjct: 15 DPHSVTLLFLLLALVALLYFIGSLIVPVLVALIIAYLLDWPVLH--LERFGLRRFTATVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + +L + + L + + G +L +P + + Sbjct: 73 VMLIFTGIMLTLILVIGPVLWQQTSNLFQETPHMVEQG---KSFLLALPAQYPSLITAEQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +++ F + + + + + +I + + +FF +D +S Sbjct: 130 VQTIVLTVETKVIEF-----GQVVLSVSLTSLKDAVAWLIYLILVPLLVFFMLKDKLELS 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ + + I + G + G V A+ + + LG Sbjct: 185 HSIAKLIPQQRRLIM-QVWNEMNQQIMNYIRGKVFEILIVGSVSFIAFTVLDLRYAALLG 243 Query: 246 VITAIMAMIPG-GAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA + ++ L G + + I + L P L Sbjct: 244 VLVGFSVLIPFVGAALVTIPVAAVALFQFGIETQFWTILIIYGIIQALDGNVLVPLLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L +L+ + +E Sbjct: 304 AVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALINAWSSTQEE 351 >gi|315635043|ref|ZP_07890324.1| PerM family permease [Aggregatibacter segnis ATCC 33393] gi|315476305|gb|EFU67056.1| PerM family permease [Aggregatibacter segnis ATCC 33393] Length = 352 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 114/342 (33%), Gaps = 13/342 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + I+ VS+YF AP+L A+++ + WP+ K + A++ Sbjct: 15 DPQAMGLAAILLFGFVSIYFFSDLIAPLLVAIVLAYLLEWPV-RLLNEKLKCPRLVAAML 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 S + L V +L L ++ L+S + W +P Sbjct: 74 VLGSFISLVFVVVLVLIPNLWAQLANLLSDLPHMFNR---FNEWFLSLPERYPELIDAQT 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S ++K + ++ + + + + + ++ FF +D + Sbjct: 131 VESIFGTVKEKILSLGESALKLSLASIMNLVTLGIYAFLVPLMV-----FFLLKDKRQLI 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + + I + G + + V + + G+ + L Sbjct: 186 DGVSRFLPR-NRTLASKVWVEMQQQIANYIRGKLLEILVVTAVTYAIFLTFGLNYPLLLA 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V ++P GA + V + + + G+ + + + + L PFL Sbjct: 245 VAVGFSVLVPYIGAVLVTIPVVLVAIFQFGDTHTFWYILIAFVVSQLLDGNLLVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L L ++ G G+F L L+ + Sbjct: 305 VVNLHPLIIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 346 >gi|296185457|ref|ZP_06853867.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|296050291|gb|EFG89715.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 340 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 113/311 (36%), Gaps = 13/311 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + + II +T P + ++ + F AV ++ + + L + E + Sbjct: 37 LFISFIIAYTLRP-MNKYMEQNGIRKKFAAVSLICILILITMTIFLLIVPSAFKESLNIS 95 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + + L I + + I + I A Sbjct: 96 YTIDKIQKIIDNLYLKLKPISNNKTIYAVMNNVSIKINNQLI--------SLFSKIFDSA 147 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 G +SI + I ++F DG +I+ +L + KKIS+ + K++ Sbjct: 148 LNIGQN----IVSIAVIPIISYYFLADGDNIANKLLNFFPINSRNMVKKISKDIDKILGR 203 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 + ++ G+V + + + L ++ A +IP P+ +I++ + Sbjct: 204 YIVSQLLLCAFIGIVTFAILIFLHIDFPIILSILNAFFNIIPYFGPVFGAVPAIFIALIK 263 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A + +W + I L P + G + + L LV G + G LG+ + Sbjct: 264 SPQKAMWVLIWLYLLQQIEGNILSPKITGDSVNMHPLMVIILLVVGGKIAGFLGMILAIP 323 Query: 334 LMALIAVIWKE 344 + +I VI+++ Sbjct: 324 VGVMIKVIYED 334 >gi|226355657|ref|YP_002785397.1| hypothetical protein Deide_07790 [Deinococcus deserti VCD115] gi|226317647|gb|ACO45643.1| Conserved hypothetical protein; putative membrane protein [Deinococcus deserti VCD115] Length = 372 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 112/329 (34%), Gaps = 19/329 (5%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 A +I + + P+ + + + V+ +FI +LV Sbjct: 45 FAVAFLIAYLTNPLLNWLQRGRVRR-----GLGVFFVLLVFIGIFGLAGMLLATVSGQLV 99 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQSLKILSETFLKTNGIDFIP-- 150 + L W E L + + L ++ +++ G + +P Sbjct: 100 QLFEKLPDLIGTFGQTLDR--WSQWLGERGIGGLDNVRERLIASAQEYVQNIGQNIVPIL 157 Query: 151 RFASRFGMIFLDYCLSII-------FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + A + LSI +++ + D ++ + + ++ Sbjct: 158 QNALNSSGTLFNSLLSIGGIFGHVLLILLLSVYLMLDYSRVNSAILHAFPRPWQPRILEL 217 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-- 261 S +V + G +IA G+ + LAG+PS A+G + ++P PI Sbjct: 218 SDLVGTAVGGYVRGQLLIAAFIGVFVWLGLSLAGIPSAAAIGFLAGAFNIVPYLGPIIGA 277 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A+ + L + + + + A I L P+++ L + ++ GV Sbjct: 278 TPALLLALTLPNVVLKIILVVVVFAAANQIESNVLSPYILSKTTDLHPITVLMAILVGVA 337 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 MG G + +AL+ ++ ++ + Sbjct: 338 LMGFAGALLAVPTVALVKLLLQKYYYPSR 366 >gi|34541553|ref|NP_906032.1| hypothetical protein PG1950 [Porphyromonas gingivalis W83] gi|34397870|gb|AAQ66931.1| membrane protein, putative [Porphyromonas gingivalis W83] Length = 386 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 125/354 (35%), Gaps = 13/354 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +++ I+ + L+G P + I+ + P+ + FL+VI Sbjct: 13 RTARLFFIILLVGGIMAIVIGLRGILIPFCLSWILAYVLMPLVRFVQYRLHFRFRFLSVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + I F + ++E VSK + Q L +P + ++ Sbjct: 73 TVLVFISALI---FFAILSLVPAVEEEVSKTITLLQQYRIDENLLQMLPA--PIRKFLSE 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR--DGFS 183 S K +S L N + + + + IF I L+F + D Sbjct: 128 SGSMNDLFKGISYEKLMENSKEIFGQLNKLVSGTISLFSYTTIFFIGVLYFIFILFDFEK 187 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +L + I + V K + S F G +IA+ G++L Y + P V Sbjct: 188 LGKGFVNLFPVGHRIRVRSILKEVDKNMNSYFRGQALIALCVGILLSIGYKIIDFPLGVT 247 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGA--IELFIVDKTLR 297 LG+ ++ +IP + + ++ G F G I I D L Sbjct: 248 LGLFIGMLNLIPYLQIVGLIPIVFLSVLKAAQTGQNFFVVLALGIGVMMIVQVIQDTILT 307 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P ++G + + + +G GLFI L + ++K ++ + Sbjct: 308 PNIMGKRMGMSPAMILLSISIWGSLLGFFGLFIALPLTMSLYSVYKRYVIQDPK 361 >gi|260767738|ref|ZP_05876673.1| permease PerM [Vibrio furnissii CIP 102972] gi|260617247|gb|EEX42431.1| permease PerM [Vibrio furnissii CIP 102972] Length = 357 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 130/354 (36%), Gaps = 14/354 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+F +++YF AP+L A+++ + WP+ + + + S TF ++ Sbjct: 15 DPHAVSLVAILFFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVQ--LCRWKISRTFAVIL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + + + + L ++ L++ + L D + + E+ Sbjct: 73 VIVAFIGVMLFAVFGLVPTIWQQIVNLINDIPNMYTGLQKFIATLPDRYPELASLEIVEP 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ ++ + + + + A+ + +I + + +FF +D + Sbjct: 133 IMNNAKNKALSMGESVVKGSLASLVSIAT--------LAVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + I + G + + G V + + + V L Sbjct: 185 RIVRGVLPR-NRKLATEVWHEMNQQISNYIRGKVLEILIVGGVSYVTFAVLELRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA + V+I L + G L + I + L P L Sbjct: 244 VAVGFSVLIPYIGAAVVTVPVAIVALFQWGVTPEFYYLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L + ++ G G+F L L+ +WK +E + + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPPQTSA 357 >gi|239948342|ref|ZP_04700095.1| permease [Rickettsia endosymbiont of Ixodes scapularis] gi|239922618|gb|EER22642.1| permease [Rickettsia endosymbiont of Ixodes scapularis] Length = 351 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 119/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S F + I Sbjct: 1 MNRTAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISDKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYRQIFTFINNIPKYKNYLQAEI-----LPPIMAKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + L P ++G Sbjct: 236 ILTGFLVIIPFIGTFISFLLTLIIGYLTFGMTAKLLYIMIIYLVGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F ++ + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIVGITKILLLNLIKFYKSSK 345 >gi|168208880|ref|ZP_02634505.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170712888|gb|EDT25070.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] Length = 377 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 114/333 (34%), Gaps = 8/333 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMC 72 I+ LY G P + + I F S +F + + + Sbjct: 31 IMNFLYKFLGIIKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + +Q + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ LS+I I L + + + Sbjct: 151 KEILKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ ++ ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGKMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIMDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|159900573|ref|YP_001546820.1| hypothetical protein Haur_4060 [Herpetosiphon aurantiacus ATCC 23779] gi|159893612|gb|ABX06692.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 404 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 44/369 (11%), Positives = 122/369 (33%), Gaps = 21/369 (5%) Query: 3 ETMLNPQGIMRWMI-MFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEES 58 +T+ + + + RW I F I + + L P + L+ + P+ + Sbjct: 11 KTIPSWRDLARWTITAFAIWLVAWLLWRTGNQLLPFVVGLVFAYLLLPLVNKLERWI--- 67 Query: 59 STFLAVIATVSVMCLFIVP-LLFLFYYGMLEMKELVSKVVLANQHGIPV-----PRWLSD 112 + A++ V + +L++ + ++ + ++ + +W Sbjct: 68 PRWAAILVVYIVGLGIVTGSILYIVPPAIDQVNGFGKSLPEFYKNTLEPKINEGLKWYRS 127 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 ++ + +LK + +++T + F + + + + Sbjct: 128 EVPDEIQEDIDKQVSKGITTLKENATNYVETGVNGILNGLGVIF--QTIIFLAGFLIIPF 185 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 LF+ D L + + I +V + G + + ++ Sbjct: 186 WLFYVLLDERKGKAALIRMIPKAVRTDVLTVLSIFDRVFSAYIRGQLTLGLIIAIMSYIG 245 Query: 233 YWLAG------VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 W+ +P + L ++ +IP PI ++ + + ++ + Sbjct: 246 LWIVDLVMPGEIPYKLLLALVAGFTELIPVIGPIIGAIPAVIVGLTTSLPMGLVVAGLYI 305 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I + L P ++G +++ LV GLLG+ I + A+ ++ Sbjct: 306 VIQQIENNFLVPRIIGAIVEIHEAVLMLLLVIAGTVSGLLGVIIFAPMAAVARDSYQYIT 365 Query: 347 MAIKENKEK 355 +++ + Sbjct: 366 GRLRQPNDP 374 >gi|157738009|ref|YP_001490693.1| acid membrane antigen A [Arcobacter butzleri RM4018] gi|157699863|gb|ABV68023.1| acid membrane antigen A [Arcobacter butzleri RM4018] Length = 348 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 125/349 (35%), Gaps = 24/349 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ + F + ++++ + + K ++ + T+++ LF + Sbjct: 12 ILLLFFMVELFNPFLKAIFVSVLLTIATSSLTLHLEHKLKKR-IVATSVMTIALAALFFL 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P+L+ ++ +V++ N I + L L + Sbjct: 71 PILYCILSFATFFNQVDQQVLVKNLDEIKL-----------LVHNLSMDFTFLNDFLNNI 119 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + I ++ G + + II +++ FFF I+ + L + Sbjct: 120 TSKIDVGKTVQDIVSISANLGKNSVKFMFDIILILVFFFFFTLYTTQIATFIRDLLP-IK 178 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + V+ + AI EG + G G + GV+ ++IP Sbjct: 179 KEDSIILFHESSSVMTVVLYSTLVTAIFEGFLFGFFLTFFGYDG-LLFGVLYGFASLIPV 237 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVG--------GPIK 306 G I + ++IY + NA + ++ + + I D ++P ++ P Sbjct: 238 VGGVIMWLPIAIYEASINSFTNALIIAIYSIVVISIIADTFIKPMIINYINKKIIKTPTN 297 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L FF +V G+ T G G+ IGP +++L I + KE Sbjct: 298 VNALLIFFSIVAGLSTFGFWGMIIGPAMVSLFISIMNLLKKYSDDFKES 346 >gi|302389699|ref|YP_003825520.1| protein of unknown function UPF0118 [Thermosediminibacter oceani DSM 16646] gi|302200327|gb|ADL07897.1| protein of unknown function UPF0118 [Thermosediminibacter oceani DSM 16646] Length = 349 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 129/354 (36%), Gaps = 28/354 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG--------FFAPVLSALIIGFTSWPIYSSFI 52 MR + + + + +F +L+ L L P ++I +T P+ Sbjct: 1 MRVKFFHDRIFIYRLFLFTVLILLAILIYRVRNKLSNVLLPFGVGILIAYTLNPVVLFLT 60 Query: 53 SKKEESSTFLAV-----IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 +K + + +A+ + +++V +++VP++ +++ ++ V + Sbjct: 61 AKGFKRNVAVALIYFILLCSLAVAMIYLVPVIITELNLLIDAVPFYAREVQYFVYEFR-K 119 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 ++S +P G E+ +++ +S+ + L + + + S Sbjct: 120 NYMSSLPAG--IQEVIDRNIDQMESILLDLLQNLVSILLGW------------FSGLFSF 165 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I I F+ +D + + R V + G +++ G+ Sbjct: 166 ILGPILGFYILKDLDRLKNSMTRYIPAEHRDRVFHWVRKVDSTLGRYVRGQLTVSLIVGI 225 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + A + G+ + +G++ I +IP P+ ++ + + + L A+ Sbjct: 226 LTSLALYSLGIDFALLIGILAGITNIIPYFGPVIGAVPAVAIALLKEPGKVPWVVLAFAL 285 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P +VG + L + L+ G G+ GL + AL+ I Sbjct: 286 IQQVESGIISPHIVGENLGLHPITVILSLLIGGTFFGVWGLILAVPATALLKAI 339 >gi|167770880|ref|ZP_02442933.1| hypothetical protein ANACOL_02233 [Anaerotruncus colihominis DSM 17241] gi|167666920|gb|EDS11050.1| hypothetical protein ANACOL_02233 [Anaerotruncus colihominis DSM 17241] Length = 369 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 115/333 (34%), Gaps = 7/333 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 S+ L FF V+ A ++ +++ + + + ++ +S L + Sbjct: 35 ASVRLLMPFFIGVVLAFVLNGVMETFEKHVFADLPRRFPRRAGLVRPLSLISTYLLVLAA 94 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS--ELWTKHLSHPQSLKI 135 L+ L + + ++ E + + L+ W E + + L Sbjct: 95 LVVLGWTVVPQLGESAITLGRNIPAYLNSLAELAARFQHEWVLPPEFYEQLTGWLSGLAD 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F+ + + FA+ FG + + +I I L + + + Sbjct: 155 FLLNFI-AEFVPYALNFAASFGGGIVTLVIGVIVSIHVLLTKEQLLSQARRLNRAFLPPK 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + R G + A+ G V + P V +GV+ + +IP Sbjct: 214 AADSIASAASVAAGTFRRYVSGQALDALIVGAVSVIGLSVLRFPYAVLIGVVMGVTNVIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + +L+ + A L+ I + + P ++GG + LP L F Sbjct: 274 FFGPFIGAVPGVLILLMADPIKAIWYILFVVIVQQVDGNIIAPKVIGGSVGLPPLWVLFA 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G G+ G+ +G L A + ++ ++ A Sbjct: 334 VTVGGNLFGIAGMILGVPLFATVYILLGRAVRA 366 >gi|17232430|ref|NP_488978.1| hypothetical protein alr4938 [Nostoc sp. PCC 7120] gi|17134076|dbj|BAB76637.1| alr4938 [Nostoc sp. PCC 7120] Length = 379 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 115/339 (33%), Gaps = 17/339 (5%) Query: 13 RWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+ + +++SLY L + +A+++ T + F + ++A Sbjct: 5 QWIGLIALILSLYILWQIKEVLLLMFAAVVLATTLNRLAKRFQRS-GMKRGWAVMLAVAI 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + EL +V + W++++ ++ Sbjct: 64 FFAVVVGFFWLIVPPFAEQFNELTYRVPQGFER---FNAWINEL--RTRIPAQLVPYIPD 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 SL ++ F+ + ++ + ++ ++ D + + Sbjct: 119 LNSLIQQAQPFINRVLGSSFAIVSGSLEVVLKVLLVLVLTGMLLA-----DPIAYRKVFV 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + G I GL+ + GV + +ALGV+ Sbjct: 174 RLFPSFYRRRVDGILDQCEVSLEGWVTGAVIAMGVVGLMSVVGLSILGVKAALALGVLAG 233 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP G +S L+ + + + + I + P ++ + L Sbjct: 234 FLNLIPNLGPTLSVVPAMAIALLD-SPWKVVAVLILYFIIQQAESNFITPIVMAQQVSLL 292 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + V G LGLF+ + + ++A IW + ++ Sbjct: 293 PAVTLISQLFFVTFFGFLGLFLA-LPLTVVAKIWVQEVL 330 >gi|113476303|ref|YP_722364.1| hypothetical protein Tery_2702 [Trichodesmium erythraeum IMS101] gi|110167351|gb|ABG51891.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 353 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 107/290 (36%), Gaps = 16/290 (5%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F+ K ++ + + + +V + L + ++ + K+ P WL Sbjct: 55 FLQKHGGKRHRAVILVFLVALVIMLVLGVILIPLLLEQLTGFIEKL----------PSWL 104 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSII 168 + + + W P +L +++ + I F + + I+ Sbjct: 105 ESGNKQLESFDQWASKYQLPINLTVITNKLTERLSSQLQDITGEIISFVLNMVGRIFDIL 164 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 I+ F+ G + + + + + + + + ++ FLG ++A G+ Sbjct: 165 ITIVITFYLMLHGDRLWNGIFNWLPNHLDIH---VRTSLKQNFQNYFLGQAMLACLMGVS 221 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + G P + G+ +M ++P G + T VS+ L+ N + + + + Sbjct: 222 MTLGLLFTGTPFGLLFGIGIGLMTLVPFGTALGVTIVSL-LITLENFWLGIKVLIVIVLI 280 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + P ++G L + L+ G++ G+LGL I + + Sbjct: 281 EQAIENFVAPRILGSFTGLNPVWIVLSLLVGMQVWGVLGLLIAVPVAGFV 330 >gi|225026409|ref|ZP_03715601.1| hypothetical protein EUBHAL_00658 [Eubacterium hallii DSM 3353] gi|224956246|gb|EEG37455.1| hypothetical protein EUBHAL_00658 [Eubacterium hallii DSM 3353] Length = 392 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 130/328 (39%), Gaps = 20/328 (6%) Query: 33 PVLSALIIGFTS---WPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFL 81 P++ LI+ F ++ +K ++ T L++ AT++ + L I + + Sbjct: 58 PIMVGLILAFVLNVPMKMFERLFAKLKKKYPQLKKIPVTSLSLFATLACIVLLIGIVYTM 117 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 F G++ + V + N +P+WLS + + ++ ++ K+L++ Sbjct: 118 FVPGLVASVRSIYNVFMEN-----MPKWLSWLRSNGMDTAWISREVTSWDFNKLLTQITG 172 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + ++++ I + S+++Q + Sbjct: 173 NVGNVGNALGKVVDATTSAFGVAMNVMMGFIIAIYVLLSKVSLTRQCKKMIYAHLSKNHA 232 Query: 202 K----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 IS +V + F G I A+ GL++ A+ + +P + V+TAI++ IP Sbjct: 233 DKICYISSLVNETYSKFFSGQCIEAVILGLLIFIAFTVFRLPYANLIAVLTAILSFIPYI 292 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + L++ + + + + FI ++ + P +VGG + L L T + Sbjct: 293 GAFASCFIGALLIVMVDPWKGLLSIVVYQVVQFIENQFIYPRVVGGSVGLAPLWTLSAAL 352 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKES 345 G G +G+ + A++ V+ K+ Sbjct: 353 IGGNLFGAIGMIFAIPVTAVLYVLLKDD 380 >gi|171912266|ref|ZP_02927736.1| conserved hypothetical transmembrane protein [Verrucomicrobium spinosum DSM 4136] Length = 407 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 113/332 (34%), Gaps = 17/332 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ L GF P++ A + S+P+ +SK+ +A+ TV + L + Sbjct: 26 VIVVIAGLKAGAGFLVPIVVAFFLSVLSFPLMHWLMSKRLPH--MVALFVTVGAIVLTLG 83 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + + V V + + G W E + + Sbjct: 84 LTVYAGASLLRKFQSEVPGYVHKLKSYVDQT--------GAWLEERGVEGAKDTANQVFD 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCL----SIIFMIIALFFFYRDGFSISQQLDSLG 192 T + + + + S I +++ + F + + + + Sbjct: 136 VPTIISLATNQDVVKNVASMVGTTFGTVATWLGSTIIVLVVMMFILMEAPGTTSRASVVE 195 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + P + I+ T+I+ G+ W + + G++ Sbjct: 196 QAGGPNLAVLLQSATD--IQKYLGVKTLISAATGVAAFILCWSFNLKYPLLWGILAFAFN 253 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G+ + I L++ + A + + A+ F +D +P L+G + L Sbjct: 254 YIPAVGSTAAGIPAVIEALVQHGVGPAVGVAIGYAVINFCLDSLWQPMLMGRRFGISGLV 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G+F+ L ++ VI + Sbjct: 314 IVLSVIFWGWLWGPAGMFLAVPLTMMMKVILE 345 >gi|323967937|gb|EGB63349.1| hypothetical protein ERJG_00967 [Escherichia coli M863] gi|323977329|gb|EGB72415.1| hypothetical protein ERFG_00851 [Escherichia coli TW10509] gi|327252143|gb|EGE63815.1| hypothetical protein ECSTEC7V_2990 [Escherichia coli STEC_7v] Length = 353 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + + + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|91793005|ref|YP_562656.1| hypothetical protein Sden_1649 [Shewanella denitrificans OS217] gi|91715007|gb|ABE54933.1| protein of unknown function UPF0118 [Shewanella denitrificans OS217] Length = 360 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 108/317 (34%), Gaps = 12/317 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ +++ + T A + + + L ++ L + L++ + G+ Sbjct: 54 WPVAQ--VARIGVNRTTGASLVLILFIGLVLLMAFGLVPSLWKQGAALITDLPSMLDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 S + E +++ + + L T + R + L Sbjct: 112 QTVTVYSQQYPQFISQE-------QIEAMILELKKLLDTEHLLDFGRQLLGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKQELIASSKRFFPS-KRDLARKVWFEMNQQIFNYIRGKVIEIVV 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + + + LGV+T +IP GA + +++ + + + Sbjct: 224 VGVASYIFFAVMDLRYAALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNVLVPLLFSDAVDLHPVLIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KESIMAIKENKEKISSN 359 ++ + K+ S Sbjct: 344 NAWPNDQQQTQPKLDSE 360 >gi|188995746|ref|YP_001929998.1| probable permease [Porphyromonas gingivalis ATCC 33277] gi|188595426|dbj|BAG34401.1| probable permease [Porphyromonas gingivalis ATCC 33277] Length = 386 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 125/354 (35%), Gaps = 13/354 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +++ I+ + L+G P + I+ + P+ + FL+VI Sbjct: 13 RTARLFFIILLVGGIMAIVIGLRGILIPFCLSWILAYVLMPLVRFVQYRLHFRFRFLSVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + I F + ++E VSK + Q L +P + ++ Sbjct: 73 TVLVFISALI---FFAILSLVPAVEEEVSKTITLLQQYRIDENLLQMLPA--PIRKFLSE 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR--DGFS 183 S K +S L N + + + + IF I L+F + D Sbjct: 128 SGSMNDLFKGISYEKLMENSKEIFGQLNKLVSGTISLFSYTTIFFIGVLYFIFILFDFEK 187 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +L + I + V K + S F G +IA+ G++L Y + P V Sbjct: 188 LGKGFVNLFPVGHRIRVRSILKEVDKNMNSYFRGQALIALCVGILLSIGYKIIDFPLGVT 247 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGA--IELFIVDKTLR 297 LG+ ++ +IP + + ++ G F G I I D L Sbjct: 248 LGLFIGMLNLIPYLQIVGLIPIVFLSVLKAAQTGQNFFVVLALGIGVMMIVQVIQDTILT 307 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P ++G + + + +G GLFI L + ++K ++ + Sbjct: 308 PNIMGKRMGMSPAMILLSISIWGSLLGFFGLFIALPLTMSLYSVYKRYVIQDPK 361 >gi|26248851|ref|NP_754891.1| putative permease PerM [Escherichia coli CFT073] gi|227887521|ref|ZP_04005326.1| permease PerM [Escherichia coli 83972] gi|300981820|ref|ZP_07175752.1| permease, PerM family [Escherichia coli MS 45-1] gi|301046368|ref|ZP_07193529.1| permease, PerM family [Escherichia coli MS 185-1] gi|26109257|gb|AAN81459.1|AE016764_141 Putative permease perM [Escherichia coli CFT073] gi|227835871|gb|EEJ46337.1| permease PerM [Escherichia coli 83972] gi|300301650|gb|EFJ58035.1| permease, PerM family [Escherichia coli MS 185-1] gi|300408897|gb|EFJ92435.1| permease, PerM family [Escherichia coli MS 45-1] gi|307554513|gb|ADN47288.1| putative permease [Escherichia coli ABU 83972] gi|315292422|gb|EFU51774.1| permease, PerM family [Escherichia coli MS 153-1] Length = 353 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRPW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLSMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|329115640|ref|ZP_08244362.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] gi|326695068|gb|EGE46787.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] Length = 374 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 106/338 (31%), Gaps = 7/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I + ++ + V ++++ + + + +V+C I Sbjct: 42 AVIALVVWLMGDVLMVVFASVLCAVVLHGLSKILVRHLRLPYGWA----LSAVICGLIGS 97 Query: 78 LLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +FL + G + E + Q + L P G L Q+ Sbjct: 98 AVFLVWNSGPAMISEALRLQDALRQQETALRSTLQSTPTGQMILNYLPASLGGHQAGGGD 157 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + I + +++ ++IA +F + L Sbjct: 158 TSSL--ASLGSRIAGSMTGILGSAFGAIGTLLVVLIAGLYFAMSPAVYANGFLRLVPVSK 215 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + + + G ++ + G + G W GVP +ALGV+ + IP Sbjct: 216 RPKVRDLLLRAGQTLWAWVAGQSLDMLVVGTLSGLGLWFIGVPLALALGVLAGLCNFIPY 275 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I ++ L + + + ++ F+ L P + +++P T Sbjct: 276 IGAIMGAVPALLLALSLGTRETIMVAVLYSVIQFLEGNVLAPVIQRHAVQMPPALTVLSQ 335 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G GL L A++ + E + Sbjct: 336 TLFGAILGFPGLIFASPLTAVLMATLDGLTPKLDEKDQ 373 >gi|266623985|ref|ZP_06116920.1| putative membrane protein [Clostridium hathewayi DSM 13479] gi|288864202|gb|EFC96500.1| putative membrane protein [Clostridium hathewayi DSM 13479] Length = 410 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 116/352 (32%), Gaps = 21/352 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-----------SSTFLAVIATVSV 70 L G PV+ ++ + PIY+ S E AT Sbjct: 38 AGLKAFIGILMPVIYGAVLAYLLLPIYNRTRSLLEGWIAKGIKKEKTIRGLSKAGATAVS 97 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + V + LF+ + ++ + + ++ + WL + + E K + Sbjct: 98 LIVLFVIVAGLFWMVIPQIYTSIMTLQEGLGENINNLALWLQKLLEDNPSLE--QKVIPM 155 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGFSISQ 186 + E +L T+ + + S L L +I+ +I + + ++S Sbjct: 156 YDEVTNQLENWLTTSLVPNVSTVISGLSSGLLSVVLALKNILIGVIVMVYLLNIKETLSA 215 Query: 187 QLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + + P + R V +V G + ++ G++ +P + Sbjct: 216 QGKKIIYSVLPLRMANQFIEELRFVHRVFGGFITGKLLDSLIIGIICFVCLNWMKMPYVL 275 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + VI + +IP P S +L++ + ++ + L P ++G Sbjct: 276 LVSVIVGVTNVIPFFGPFIGAVPSAFLILLVSPMKCLYFLIFIVLLQQFDGNILGPKILG 335 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP F ++ G +G+ I A+ + + KE Sbjct: 336 QSTGLPSFWVLFSILLFGGLFGFVGMIIAVPTFAVGYSMLTGLVNRALRKKE 387 >gi|91211813|ref|YP_541799.1| putative permease PerM [Escherichia coli UTI89] gi|110642655|ref|YP_670385.1| putative permease PerM [Escherichia coli 536] gi|117624677|ref|YP_853590.1| putative permease PerM [Escherichia coli APEC O1] gi|191172962|ref|ZP_03034497.1| putative permease, PerM family [Escherichia coli F11] gi|218559417|ref|YP_002392330.1| permease [Escherichia coli S88] gi|218690608|ref|YP_002398820.1| putative permease [Escherichia coli ED1a] gi|237704999|ref|ZP_04535480.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300997972|ref|ZP_07181903.1| permease, PerM family [Escherichia coli MS 200-1] gi|306814441|ref|ZP_07448603.1| putative permease [Escherichia coli NC101] gi|331658631|ref|ZP_08359575.1| putative permease PerM [Escherichia coli TA206] gi|91073387|gb|ABE08268.1| putative permease PerM [Escherichia coli UTI89] gi|110344247|gb|ABG70484.1| putative permease PerM [Escherichia coli 536] gi|115513801|gb|ABJ01876.1| putative permease PerM [Escherichia coli APEC O1] gi|190906826|gb|EDV66430.1| putative permease, PerM family [Escherichia coli F11] gi|218366186|emb|CAR03932.1| putative permease [Escherichia coli S88] gi|218428172|emb|CAR09086.2| putative permease [Escherichia coli ED1a] gi|222034201|emb|CAP76942.1| permease perM [Escherichia coli LF82] gi|226901365|gb|EEH87624.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294490984|gb|ADE89740.1| putative permease, PerM family [Escherichia coli IHE3034] gi|300304073|gb|EFJ58593.1| permease, PerM family [Escherichia coli MS 200-1] gi|305851835|gb|EFM52287.1| putative permease [Escherichia coli NC101] gi|307625955|gb|ADN70259.1| putative permease [Escherichia coli UM146] gi|312947066|gb|ADR27893.1| putative permease [Escherichia coli O83:H1 str. NRG 857C] gi|315288094|gb|EFU47494.1| permease, PerM family [Escherichia coli MS 110-3] gi|315300458|gb|EFU59688.1| permease, PerM family [Escherichia coli MS 16-3] gi|320196325|gb|EFW70949.1| hypothetical protein EcoM_01718 [Escherichia coli WV_060327] gi|323188215|gb|EFZ73508.1| hypothetical protein ECRN5871_3547 [Escherichia coli RN587/1] gi|323949486|gb|EGB45374.1| hypothetical protein ERKG_04023 [Escherichia coli H252] gi|323955730|gb|EGB51488.1| hypothetical protein ERLG_02994 [Escherichia coli H263] gi|324011198|gb|EGB80417.1| permease, PerM family [Escherichia coli MS 60-1] gi|331054296|gb|EGI26323.1| putative permease PerM [Escherichia coli TA206] Length = 353 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRPW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|257869328|ref|ZP_05648981.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803492|gb|EEV32314.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 351 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 119/351 (33%), Gaps = 24/351 (6%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW ++ + L+ L+ +L I + + + K S L+++ + V+ Sbjct: 17 RWTVLIFLCGILFLLRSMMTIILLTFIFTYLIYKLVQLIRKKVNVSIKLLSIVLYLIVVA 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + + +LV V Q L + + S+ K Sbjct: 77 LVYLVITKYAPILLNQSAQLVKSVTDFYQKADSNNELLEYLLHLVQTSDYVQKI------ 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS---ISQQLD 189 NG+ + + FG + L +S + FFF D SQ Sbjct: 131 ----------QNGVVVVINYLYNFGELALTVLISFLLS----FFFMIDNKKTVAFSQLFL 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 F ++R + S +IAI ++ A + G P ++L ++ Sbjct: 177 QGSASWFFEDVYYLARKFTRAFGSVIETQLLIAIVNTVITVLALAVMGFPQLLSLAMMIF 236 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++IP I ++ G + + + L + L P L+ ++P Sbjct: 237 FLSLIPVAGVIISCIPLTFIAYTIGGLNDVVYVLLIIIFVHALESYVLNPRLMSHKTEIP 296 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 TF L G G+ GL +G L + + K + N K S + Sbjct: 297 MFYTFIVLYLGEHLFGIWGLIVGIPLFTFLLDLMKIKQVPSIRNALKKSES 347 >gi|313124985|ref|YP_004035249.1| permease [Halogeometricum borinquense DSM 11551] gi|312291350|gb|ADQ65810.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 333 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 116/330 (35%), Gaps = 31/330 (9%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + + + L+ V ++ + + WP+ + + + S + +AT Sbjct: 12 LFVLAGVAAAFLLRSVLGTVFFSVTVAYLLWPVRQAVVRR-GWSPRAASGLATAGAFLAV 70 Query: 75 IV---PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + PL + Y + LV + + + + Sbjct: 71 LAGLTPLAIVVYLRFDSLTTLVGLLPSNLSFELFGMTYALTL------------------ 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T + ++ + A+ + + + ++ G Q ++ Sbjct: 113 -------AEVTTFTVAYLRQLATVVAAATPVLLVKVTLFVFLVYSLLYHGEDAQQAALAV 165 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + + ++ A G ++ ++ G + V L + A++ Sbjct: 166 VPSSYQSAARALNSRARDTLFAIYVLQAATAAGTFVLAVPVFFFLGYDAVVTLATVAAVL 225 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P G + ++ Y L G+ A + + GA+ ++ D +RP L +P Sbjct: 226 QFVPIVGPTLLLLGLAAYQLALGHTVQALLVVTVGGALVAWLPDVLIRPPLAKQTADIPG 285 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 F G GG T+G +G+ GP+++ L Sbjct: 286 SLYFVGFFGGTLTLGAVGIVAGPLVVGLFV 315 >gi|145589942|ref|YP_001156539.1| hypothetical protein Pnuc_1762 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048348|gb|ABP34975.1| protein of unknown function UPF0118 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 329 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 6/313 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P L+A I+ + P + ++ S A ++ + + + L E+ Sbjct: 5 FTPFLAAFILAYILRPAFLWLERRRVPSP-LAAGLSIIFGLGIVGAILSLFIGLLKTEVP 63 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + ++ + WL + + W + + + Sbjct: 64 MIKEQLPTWIANTQ---AWLGPKLADLHINMDWGHLKTLASQKISEHISENADELMSTTL 120 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G + ++ + ++ +F+ D Q + +L ++ + Sbjct: 121 DTVLMSGSSVITGFVNAVLILFVMFYLLIDWAQFFQYIKNLVPPRAQETIHHLAMHTDGL 180 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY-- 268 + GM I+ L G+ VALG+ TA+M +IP ++I Sbjct: 181 LSQYLNGMVIVISIMSAFYSIGLSLIGLKGAVALGIFTALMIVIPYIGITIGFTLAIISA 240 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LL G + + F+ L P LVG I L + F L+ + G G+ Sbjct: 241 LLQFGPQKELVAVMGLYGLGQFLEGFILTPRLVGERIGLHPVVVLFALLLFGKLFGFFGV 300 Query: 329 FIGPVLMALIAVI 341 + + A+ V+ Sbjct: 301 LLALPISAVSLVM 313 >gi|146296898|ref|YP_001180669.1| hypothetical protein Csac_1893 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410474|gb|ABP67478.1| protein of unknown function UPF0118 [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 351 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 119/336 (35%), Gaps = 19/336 (5%) Query: 14 WMIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIA 66 +++FI V +F+ P + AL + + P+ K + S L+ I Sbjct: 15 ILLIFIAFVIYFFINIKTFWPILLPFIIALFLSYLLKPVVDFLEVKIKSRDISILLSFIF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T S+ L V + LF M ++ + + + + + E+ + Sbjct: 75 TFSIAILIFVYFIPLFITEMKQLTQNIPEYISVFNKWFKDVDSKLSNKLNIDLEEILRSN 134 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +++ + L + + I F+ +D I + Sbjct: 135 SINFEAISKQ------------VLTTLLNILKNLYSNILYYLLIPIISFYILKDWSKIVK 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + I + KV+ + AI G++ + + V LG+ Sbjct: 183 WIKWILPEKYRKEGISIFNDINKVLHQYIRAQLLDAIIIGILSFLGFSILSVRYAALLGI 242 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 IT I +IP PI + ++ + + + A + ++ + I + P ++G + Sbjct: 243 ITGIGNLIPYFGPIFSSIPAVVIALSDSYIKAIVVVVFLIVLQQIDSFLISPRIIGSRLG 302 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L L+ + G + +F L A+I +I+ Sbjct: 303 LHPLTIIIVLIISNKLFGFISMFFAIPLAAVIKIIF 338 >gi|254519283|ref|ZP_05131339.1| permease [Clostridium sp. 7_2_43FAA] gi|226913032|gb|EEH98233.1| permease [Clostridium sp. 7_2_43FAA] Length = 343 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 113/311 (36%), Gaps = 13/311 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + I+ + P+ + K + S + +++ I+ + + E + Sbjct: 40 IFIGFILAYALKPLRDTISEKFKLSKKISSTSIILTIFLGLILLSYIVIPSIIRESYNIG 99 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + ++ +I + +++ + S + F + + Sbjct: 100 YILDNID-------EYVKNIVYKLNLNDI-SFFESIYNQISEEVNIFFSKVTDNLLENL- 150 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 M+ + +S+ + I ++F DG I +L + K++ + KV+ Sbjct: 151 ----MVCFESLVSLAIVPIVTYYFLVDGDLIYNKLLLILPTEKRIIAKRVISHIDKVLSR 206 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 + ++++ G + + V + LG+ I+ ++P PI +I++ + Sbjct: 207 YIISQLLLSLIIGALTFIVLVIIDVKFALILGIFNGILNIVPYFGPIIGGVPAIFVALME 266 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A + + I L P + G + + L+ G + GL+G+ + Sbjct: 267 SPNKALWTLIAIFLIQQIEGNILSPKITGDSTNMHPIIIIILLLVGEKLGGLIGMIVAVP 326 Query: 334 LMALIAVIWKE 344 + ++ VI+ + Sbjct: 327 IGVIVKVIYDD 337 >gi|326795245|ref|YP_004313065.1| hypothetical protein Marme_1981 [Marinomonas mediterranea MMB-1] gi|326546009|gb|ADZ91229.1| protein of unknown function UPF0118 [Marinomonas mediterranea MMB-1] Length = 356 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 111/347 (31%), Gaps = 12/347 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + N + ++ +++ ++ L F G APVL A+++ F + K Sbjct: 9 IKRYLSNEEVVVFMLLLTACILVLAFWGGILAPVLIAVVLAFLLQGGVTRL-KKVGLGHN 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I V + + + + + V+ + L+ + Sbjct: 68 LSVSIVFVLFVSSCSLFIGVMVPIIWRQAVRFVNDLPRMFLDLQIFLEALAKQNSAYVSE 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + ++ F+ + ++ + + +FF +D Sbjct: 128 SAIQEVINTVTNEL--------AGLGQWVVSFSLSSIPSLFSLAIYLVLVPLVMFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L S H + + I+ + I + G I + G+V +W G+ Sbjct: 180 QKKIVAYLTSWLPH-ERSMMRNIAHEMNDQIANYVRGKVIEMLVVGVVSYIVFWFLGLRY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRP 298 L ++ + +IP GA V + + N +F + + L P Sbjct: 239 AELLALLVGLSVLIPYIGAAAVTVPVVLVAFYQHGTSNEFWYVFGAYLVVQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L ++ G G+F L L+ I Sbjct: 299 LLFSEAVNLHPLAIIVAVLFFGGIWGFWGIFFAIPLATLVKAIINAW 345 >gi|53711948|ref|YP_097940.1| putative permease [Bacteroides fragilis YCH46] gi|52214813|dbj|BAD47406.1| putative permease [Bacteroides fragilis YCH46] Length = 379 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 128/365 (35%), Gaps = 20/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R I ++V L L G P A +I + +P+ F K Sbjct: 1 MERKKITFDSFIRGSICCALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYY-GMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S +++ + + + + L +L + EM + +V +G S Sbjct: 61 FKSRIISIFCALFSITVVGISLFYLLVPPMLAEMGRMNDLLVTYLTNGAY-----SSGTV 115 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMII 172 SE KH+ +ILSE + + +P+ + I S I ++ Sbjct: 116 PPTLSEFIHKHIDLQALNRILSEENIMNTIKETVPKLWALVAESINILFSVFASFIILLY 175 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F D SI++ L + + + + + F G +A G++ Sbjct: 176 VVFILL-DYESIAEGWLHLLPGKYRTFASNLVNDIQDGMNRYFRGQAFVAFCVGILFSIG 234 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P +ALG+ + M+P I F + ++ G F + Sbjct: 235 FLIIDFPMAIALGLFIGALNMVPYLQIIGFLPTIVLAILKAADTGENFWVILAGALIVFI 294 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D L P ++G L L +G+LG+ I L L+ ++ I Sbjct: 295 VVQAIQDGFLVPRIMGKITGLNPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFI 354 Query: 347 MAIKE 351 + ++ Sbjct: 355 INKEK 359 >gi|315648858|ref|ZP_07901953.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] gi|315275826|gb|EFU39178.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] Length = 343 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 141/339 (41%), Gaps = 9/339 (2%) Query: 17 MFIILVSLYFLKGFF---APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I + L+ L G F AP L A++I P+ + + + A + + L Sbjct: 6 LIFIGLGLFLLYGMFTVGAPFLLAIVIAIALEPLNRLLMKRLRLNRIAAATATSTLFLLL 65 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQS 132 LL + G+ +LV A Q+ +L I + L+ + Sbjct: 66 L---LLLAYLIGLQVFNQLVEYWSRAPQYFEGANEFLQHTIIQAQDMLNGISPGLADSLT 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + + ++ + F + ++ I +A++ F ++ +++ SL Sbjct: 123 EFMSNISSYVQSLVNSVSSTFLSFAKTLPNLFVTFIVFCVAVYLFAFSLDTMRERVLSLF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + ++ + K I I+++ ++ + G+ +A+ ++ I+ Sbjct: 183 DETSQSQVNEVLLSLKKSIFGFLRAQLILSLFTYVITLLGLLILGINYPLAIALLVTIVD 242 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G S+YLL G++F L ++ I + ++ + L P ++G + + LP Sbjct: 243 ILPILGVGSVLVPWSVYLLATGDVFTGLGL-IFLFILITVIRRVLEPKVIGDAVGIGALP 301 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G + +G++G FIGP+++ + + + K + IK Sbjct: 302 ALVSMYVGFKLVGVIGFFIGPLVVIIYSAMRKAGLFQIK 340 >gi|313610346|gb|EFR85574.1| YubA [Listeria monocytogenes FSL F2-208] Length = 228 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 81/201 (40%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + L+I+ + LF+ +DG + L + A+ +++ Sbjct: 5 SSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQ 64 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I S G I+++ G++L Y + G+P + L +I A +++P P +I + Sbjct: 65 ISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIA 124 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + + L + + + K + P ++G +K+ + F ++ G+LG+ Sbjct: 125 IVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGILGVIF 184 Query: 331 GPVLMALIAVIWKESIMAIKE 351 A++ VI + K Sbjct: 185 AVPGYAVLKVIVTHVFIWFKR 205 >gi|170696850|ref|ZP_02887946.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|170138024|gb|EDT06256.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] Length = 658 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 120/349 (34%), Gaps = 20/349 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 QG++ + ++ +LYF + PV A+++ F P+ + K ++V+ V Sbjct: 25 QGLITLAVGVTVVAALYFAREILIPVTLAILLSFLVAPLANLLGRIKLGH--VVSVLLAV 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS----DIPGGMWASELWT 124 ++ IV L + + ++ + + + + I L+ + G L Sbjct: 83 TMSLSVIVVLGGVIAAQITDLAIGIPRYQASIDNKISAVHGLTVEKLNRLAGAAGQALQR 142 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIP-----------RFASRFGMIFLDYCLSIIFMIIA 173 + PQ+ + + + +P + A R + + + + Sbjct: 143 ATVDQPQATRNSAPSASGVQQPAVLPVEVREPSQTPFQLARRVLSPVVRPLETAFIVFVV 202 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + L + + F+ I G G+V+G Sbjct: 203 TIVILLQRDDLRDRAIRLLGSRDLHRTTTAMDEAARRLSRYFVSQLGINAGVGIVIGIGL 262 Query: 234 WLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + GVPS V G++ A++ ++P G + A ++ + A + I + Sbjct: 263 SIIGVPSPVLWGILAALLRLVPYVGIWISAILATALAAAVSPEWSMAIWSLVLFLIVELL 322 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 V + + P L G L + G +GL + P+ + L+ Sbjct: 323 VGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLV 371 >gi|163754904|ref|ZP_02162025.1| hypothetical protein KAOT1_02782 [Kordia algicida OT-1] gi|161324971|gb|EDP96299.1| hypothetical protein KAOT1_02782 [Kordia algicida OT-1] Length = 362 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 128/351 (36%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +F++L LY ++ + A +I PI + + +T + Sbjct: 12 KALAVILGVFLLLYFLYKIQVVIVYIAIAAVISLIGRPIVGVLKRRLKFRNTIAVIFTMT 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ LF+ ++ + L + Q I + + L TK++ Sbjct: 72 IMIGLFVGLIMMFIPLVAEQGHNLSLLNIEELQGNI-------ENLYEQISGYLSTKNID 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 QS+K IP F + ++ + ++ ++ FF +D + + Sbjct: 125 LDQSIKE--SKIFANIDYALIPNFFNALISGLGNFSIGLLSVLFISFFLLKDSKLLEDGM 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + W + + ++ F+G+ I ++ A + G+ + + + + Sbjct: 183 LVLVPNNKEQRWSRSFEKIKDLLSRYFVGLVFQIIILFVIYTIALLIFGISNAIVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTL-RPF 299 A++ +IP P+ + + L + N I T + + ++D L +P Sbjct: 243 ALLNLIPYIGPLFSGILMMVLCMTSNLEADFSEVILPNTIGVMIFFLIAQLIDNFLSQPL 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F ++ G++G+ + I VI KE + K Sbjct: 303 IFSNSVKSHPLEIFLVIIIWGILFGIIGMVVAVPSYTAIKVILKEFLSDNK 353 >gi|32475947|ref|NP_868941.1| membrane protein- a permease [Rhodopirellula baltica SH 1] gi|32446490|emb|CAD76326.1| putative membrane protein-putative a permease [Rhodopirellula baltica SH 1] Length = 384 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 118/358 (32%), Gaps = 39/358 (10%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM-- 71 + + ++Y+L+ P + AL I PI ++ + A + + Sbjct: 18 ILTAIALTAAVYWLRSVLIPFVVALFIVSGITPILDFLQARLNVNRIVAAGVTFALAIGG 77 Query: 72 CLFIVPLLFLFYYGMLEMKELV-------------------SKVVLANQHGIPVPRWLSD 112 + ++L M E +L ++ +++ G ++D Sbjct: 78 TFLVGMSIWLSMAQMSEEGKLYRMRVSEIVSNAEDWLHENVAERFESSEVGERSEAAVAD 137 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + + P L + L+ F+ + + I ++I Sbjct: 138 L-VEESEATVVPAERQEPDELLANAAADLRDQLEAFLRNAVATLSSELFQLGSTSIVILI 196 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +FF +L ++ V + +RS T+I++ G+V G A Sbjct: 197 YVFFLLLG-------------NLSGYGENTLAYQVDRQVRSYLFVKTMISLATGIVFGMA 243 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPI---SFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 WL GVP + G++ ++ IP PI I L G++ Sbjct: 244 LWLFGVPMALTFGLLAFLLNYIPNIGPILASILPLPFILLHPDGSMLWMIIAIAVTCSIQ 303 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESI 346 L P L+G L + L+ G+ G+F+ P+ A+ + + + Sbjct: 304 VASGNLLEPKLMGNSADLHPVVILLALMFWGTLWGITGMFLATPITAAIKIALDRMDV 361 >gi|332073204|gb|EGI83683.1| hypothetical protein SPAR50_0852 [Streptococcus pneumoniae GA17570] Length = 343 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 108/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 11 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLIWGMVIGVVYLLPIL 70 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 71 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 124 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 125 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 184 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 185 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 244 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 245 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 304 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 305 VGMIVAVPTYSILKEI 320 >gi|209542427|ref|YP_002274656.1| hypothetical protein Gdia_0244 [Gluconacetobacter diazotrophicus PAl 5] gi|209530104|gb|ACI50041.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 376 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 113/340 (33%), Gaps = 11/340 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ ++++S++ + V +A +I + + + +LA+ V V+ Sbjct: 44 AILLAVMVLSIWLIGDVLMVVFAATLIAVILHNLAAMVERRTRL-PYWLALSLVVVVLLA 102 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQS 132 I L + + E A + I + + G + AS + L + PQS Sbjct: 103 AIGGLGWSSGPAIAE---------QATRLRIALTTQAHSLRGQLNASTMGRTVLDYLPQS 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L I + ++ ++IA +F L L Sbjct: 154 LGGNQAGGGDNGMGSRIAGSMTGVLSSAFGAAGTLAVILIAGLYFALSPALYVNGLLRLI 213 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + + + + G + + G++ G W GVP +ALGV+ + Sbjct: 214 PPGHRPAARTLLLVAGRTLWAWTAGQALDMLVVGILSGVGLWFIGVPLALALGVVAGMAN 273 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP +I L + + A F + P + +++P T Sbjct: 274 FIPYIGAFIGAVPAILLGLSQGTREGLLVMALYAAIQFFEGNVMAPLIQRHAVQMPPGLT 333 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GL GL + L A + + + + E Sbjct: 334 ILSQTVFGTILGLPGLVLASPLTAALLAMMDRATPPLDEE 373 >gi|117620612|ref|YP_856210.1| PerM family permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562019|gb|ABK38967.1| putative permease, PerM family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 356 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 116/342 (33%), Gaps = 14/342 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++++ L+ AP+L AL++ + WP+ + + S T + Sbjct: 15 DPDAVTLFLLLVACFAVLWLFGDLLAPLLVALVMAYLLEWPVSR--LQRAGLSRTLATSL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + L L + L + H ++ +P Sbjct: 73 ILLLFIALTAMAFLGLIPTLASQGLNLAKESPAMLSH---AQDYVRTLPE----QYPELI 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ +++ + T G + S + + + I + + +FF +D + Sbjct: 126 NVTLVETIIDNIRQRILTGGEQLVSASLSSL-INVVAILIYAILVPLMVFFMLKDKQILM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ + + I + G I + G++ A+ + G+ V L Sbjct: 185 GGLRRFLPR-NRTLVNRVWVEMNEQILNYIRGKVIEILIVGVISYVAFAMLGLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA V++ L + G T L + + + L P L Sbjct: 244 VAVGFSVLIPYIGAAAVTVPVAMVALFQWGLTPEFTWLMVVYTVIQVLTGNVLEPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L+ + Sbjct: 304 ALNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVLNAW 345 >gi|78043486|ref|YP_359395.1| hypothetical protein CHY_0537 [Carboxydothermus hydrogenoformans Z-2901] gi|77995601|gb|ABB14500.1| putative membrane protein [Carboxydothermus hydrogenoformans Z-2901] Length = 351 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 124/333 (37%), Gaps = 13/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSV 70 +R + + L+ Y ++ F P + A + + WP+ ++ +K+ + F + + + Sbjct: 10 LRVAGIVVALIFFYRIRAVFFPFILAGFLAYLLHWPV--EWLERKKINRGFGIFLLYLVL 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F + ++ EL++ + NQ + R + I G E+ L Sbjct: 68 GIMIFLITKFFLPSFIKQINELIAVLPGYLNQVQEFLDRQQAGIDRGSLPPEIKKSLLIQ 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 SL+ LK+ + + I ++ +D ++ + + Sbjct: 128 IDSLEKSVAGILKSLLATL---------WGISSHLFDFLLAPILAYYILKDVHNLKKNIL 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 F ++ V G +I + G++ G ++ +P LG++ Sbjct: 179 GYLPVDFRDEAIIFLKVCDHVFGRFIKGHLLICLTVGILTGLILYILKIPYSFLLGLLAG 238 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IM ++P PI + + L + L + I L P ++G + L Sbjct: 239 IMELVPYFGPILASIPILALALLKGKVLFIKTLLAIVLIQQIEGNVLAPKILGDSLGLHP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L F L+ G G+LG+ + + A++ ++ Sbjct: 299 LTVIFLLLCGFNLGGVLGMILAVPVAAVVRNLY 331 >gi|305666559|ref|YP_003862846.1| hypothetical protein FB2170_09836 [Maribacter sp. HTCC2170] gi|88708828|gb|EAR01063.1| hypothetical protein FB2170_09836 [Maribacter sp. HTCC2170] Length = 362 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 124/343 (36%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++L+ LY ++ A + A + PI + + ++T + + ++ + Sbjct: 20 IALLLLFLYKIQSVLAYLAIAAVASLLGRPIVLFLRRRLKFNNTIAVIATMILLIGIIAG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + L + A Q +++ + S I Sbjct: 80 IIALFIPLLVSQGQNLSLLNIDALQ---------ANVENLYRQVTEYFSLSSMEIEQGIK 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 FIP F + F + + + ++ FFF +D + L Sbjct: 131 GSEIFANLDFGFIPNFLNSFVGVLGSLSIGLFSVLFIAFFFLKDSKLFEEGLLVFIPDNK 190 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + KK + ++ FLG+ + + ++ + ++ G+ + + + + A++ +IP Sbjct: 191 ESRLKKSINTIKDLLSRYFLGLVLQILILFIIYSTVLFIFGIENAIVIAFLCALLNLIPY 250 Query: 257 GAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 PI + + L + N I T + G + +VD +PF+ +K Sbjct: 251 VGPIIGGVLMMTLTMTSNLGYDFSTVILPKTIYVMIGFVIGQLVDNFFSQPFIFSNSVKS 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G G+ G+ I I VI KE + K Sbjct: 311 HPLEIFLVIIIGGLLFGITGMIIAVPGYTAIKVILKEFLADNK 353 >gi|255326282|ref|ZP_05367368.1| hypothetical membrane protein [Rothia mucilaginosa ATCC 25296] gi|255296736|gb|EET76067.1| hypothetical membrane protein [Rothia mucilaginosa ATCC 25296] Length = 428 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 104/347 (29%), Gaps = 16/347 (4%) Query: 14 WMIMFIILVSLYFLKGFF-----APVLS---ALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + V L + A V A+ I PI S + Sbjct: 89 FGFLMTVGVGLALFAYYIFNNVGALVGWVTGAIFIALGLDPIVRRLESW-GIKRGIGVIA 147 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + + Q+ I W ++ S + Sbjct: 148 VLAGFAGAVTGLVMTIGPVISEQASKFIQYAPGIYQNTIDS-DWYHELDQRFNISTWVNE 206 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ ET ++ ++ G +I ++ +F +I Sbjct: 207 NIP------KFLETTFSSSQVNSFMSSLVSAGSTLAQSVTGVIIVLFLSLYFLTSMDTIK 260 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L K I+ + + + + +G ++A+ V G + Sbjct: 261 AWGVRLAPASKRVRVKYITDKITESVGNYVMGQALVAVLNAFVAFFIMLFVGFSFPQLMA 320 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+A IP + ++ +L+ A + + L + + P ++ + Sbjct: 321 LVVMILAFIPLVGGVIALILTSLILLTQGWSLALWFAVAYFLYLQVEAYLISPRIMARAV 380 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P + G G+LG I A + ++ +E + ++ Sbjct: 381 SVPAGVAIISVAAGGALWGVLGALIAIPAAASMLILVREVFIPRQDQ 427 >gi|215487785|ref|YP_002330216.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|312967770|ref|ZP_07781985.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|215265857|emb|CAS10266.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|312287967|gb|EFR15872.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 353 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 113/346 (32%), Gaps = 12/346 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQSIGCSRPWA 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +++ + V L ++ + L + + + N+ P M A Sbjct: 70 TSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGI 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 130 IDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP GA + V + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|291570815|dbj|BAI93087.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 351 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 119/353 (33%), Gaps = 22/353 (6%) Query: 3 ETMLNPQGIMRWMIMFII-LVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEES 58 E + ++R++++F + F+ F + A I F Sbjct: 10 ENFFSNSRLVRYLLLFAFGWAFIQFIAYFETIIIVFVFAAIFAFLLNYPVQWLQKY---- 65 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 T + + +V L L ++ V Q P L + Sbjct: 66 --------TSHTVAVVVVFSTSLLLLIGLLATLGLAIVSELQQFVTQAPDLLDSFVNLLD 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E K+ + +L L E + F F + L + I +++ FF Sbjct: 118 QIETLLKNANIRVNLDFLQEDLKQEVSNLF--GFGTAAVGKILSGLVEFIIILVVTFFML 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +G + S FP+ + + + F G I+++ G Y + Sbjct: 176 LNGEQLWASFQSF----FPSNIEDFTLSLRNNFLGFFRGRLILSVFFGFSAFFVYLILQA 231 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + L + + +IPG +S +++ I + + ++ + I + L P Sbjct: 232 PYPLFLATLVGVFDLIPGVGATIGIILSAIIVLPKGILISLQVIVYCVLLQQIEENILMP 291 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ + L + FF L+ G R G LGLF+ + A+I +K+ Sbjct: 292 RIMQNSVNLNPVVIFFALLLGARIAGFLGLFLSIPIAAVIVGFVNIKNAEVKQ 344 >gi|304393250|ref|ZP_07375178.1| membrane transporter [Ahrensia sp. R2A130] gi|303294257|gb|EFL88629.1| membrane transporter [Ahrensia sp. R2A130] Length = 353 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 120/328 (36%), Gaps = 15/328 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + +LY +GFF P+ A++ T P+ F + S T V+ L + Sbjct: 13 FIILFTAALYLARGFFLPIAVAVVFALTMSPVIRFFTRRGVPSP------VTAFVLVLIL 66 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V L Y + + + + A + G + L+ + + A + K + + + Sbjct: 67 VGFGVLAIYTL--VIPMADWIERAPEIGNQLKEKLAALKPSLQAVQEAQKEVEAATAGEG 124 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + G F AS L ++ ++ L F G +L + + Sbjct: 125 RAVQKVAVEGPGFFAYAASSV----LAGITMLVITLVLLTFLLASGDMFYAKLVQAFDSM 180 Query: 196 FP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I+ + + + + II G+V+ +L G+P+ G + + + Sbjct: 181 KDKKRALRIAHDMERDVSRYLFTIAIINASLGVVIAIGLYLLGMPTPYIWGAVAGLANFM 240 Query: 255 PGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P I ++ ++ + A + + FI + + P +VG ++L + Sbjct: 241 PYVGAILGLGAATAVAVVSFDTLAPALTIAAFYFSCTFIEGQFITPTVVGRRLELNAVAV 300 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F + G++G I L+ ++ Sbjct: 301 FISVAFWAWLWGIVGALIAVPLLVILKT 328 >gi|170738761|ref|YP_001767416.1| hypothetical protein M446_0413 [Methylobacterium sp. 4-46] gi|168193035|gb|ACA14982.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 679 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 113/356 (31%), Gaps = 30/356 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I +I+ +LYF + P+ A+++ F WP+ + A I + CL Sbjct: 33 LLIAALIVAALYFGREILIPIAIAVLLSFVLWPL---VSLLRRLRLGRTASIGLSVLTCL 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT--KHLSHPQ 131 +V LL L ++ +L S + + L + P G A + + KHL Sbjct: 90 GVVGLLTLVIGL--QVADLGSNLPQYQRTIERKLENLREGPVGSIAGYMRSIGKHLQQAG 147 Query: 132 SLKILSETFLKTNGIDFIPR---------------------FASRFGMIFLDYCLSIIFM 170 S+ P A R L + + Sbjct: 148 SIPEDKAKPQDPTAPRPAPSVQNPDKPVLVEVRERELTPLELAERLLSPALAPLATTGIV 207 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L F + +L L + + FL + G G+ +G Sbjct: 208 FVVLMFILGQREDLRDRLIRLAGSSDLHRTTVAMNDAARRLSRFFLVQLALNAGFGVAIG 267 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 W+ GVPS + G+ TA+M +P + + L + L + Sbjct: 268 IGLWIIGVPSPILWGIFTALMRFVPYVGAFLSALLPLLLAAAVDPGWHMVLATAALFLIL 327 Query: 291 --IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IV + + P L G L + G +GL + L + V+ + Sbjct: 328 EPIVGQVVEPLLYGHSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 383 >gi|325677165|ref|ZP_08156832.1| integral membrane protein [Rhodococcus equi ATCC 33707] gi|325552038|gb|EGD21733.1| integral membrane protein [Rhodococcus equi ATCC 33707] Length = 401 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 108/310 (34%), Gaps = 13/310 (4%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + ++ + ++A V + + L F+ + + +L + + WL+ Sbjct: 74 LHRRGVPRSAAVLVAVVGTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTK---AQEWLT 130 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 P ++ + ++++ E A+ G IF L+ + Sbjct: 131 QGPLHFSEDQIRHAGDNVVKAIQSNQEALTSGA-----LTTATVIGEIFAGAFLT----L 181 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L FF G + + + + + R + +A + + +G+ Sbjct: 182 FTLVFFLYGGNQVWEFVTRIIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGA 241 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + GVP + L + + A IP GA ++ + L+ + A + + Sbjct: 242 GLAILGVPLALPLASLVFVGAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQ 301 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L+P L+G ++L L + G+ G++G + ++A + + Sbjct: 302 LEGHVLQPLLLGRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGDT 361 Query: 351 ENKEKISSNF 360 + E++ + Sbjct: 362 DEAEEVYESL 371 >gi|317492767|ref|ZP_07951192.1| hypothetical protein HMPREF0864_01956 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919290|gb|EFV40624.1| hypothetical protein HMPREF0864_01956 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 354 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 118/356 (33%), Gaps = 14/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + I+ + +YF G AP+L A+++ + WP + + S Sbjct: 10 RRRFTDPQAVALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHK--LQLIGFSRV 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + ++ + + + L++ + + + + +P S Sbjct: 68 WAVIAVLIVFGGITLLSVFVIAPAVWQQGFNLMADMP---KMVTRFYEFAATLP-----S 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + + + + + L + +I + + +FF +D Sbjct: 120 RYPALVDAGIIDMVVENIRAKMAVMGESVVKLSLASLVGLLTLAIYLILVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + I + G + + G+ + + + Sbjct: 180 KEQMLNAVRRVLPRDRGLAGQVWIE-MNQQITNYIRGKVLEMVVVGIATYLVFLVVDLHY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V I L + + LF+ + + L P Sbjct: 239 ALLLAVLVGFSVLIPYIGAVLVTIPVVIVALFQWGLGADFWTLFIAYLVVQGLDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + + Sbjct: 299 LLFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDEFISEAD 354 >gi|182417136|ref|ZP_02948509.1| permease [Clostridium butyricum 5521] gi|237667128|ref|ZP_04527112.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378978|gb|EDT76484.1| permease [Clostridium butyricum 5521] gi|237655476|gb|EEP53032.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] Length = 374 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 117/334 (35%), Gaps = 12/334 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P + AL+ + P+ F K +F + ++ + V L F + + Sbjct: 43 LSPFIYALVCAYVLNPVVKCFERKFNIKRSFAIAATYLILVGIVFVGLFFTIPSIIDSIL 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + ++ + + V ++ +EL T+ S S T + +D + Sbjct: 103 NITGEIP---NYMVKVQELINMSLSNERINELITQ--SGLLSSIQNIATQIGNVSMDLLQ 157 Query: 151 RFAS---RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG--EHLFPAYWKKISR 205 FA ++ L + I L +D + + + + + R Sbjct: 158 DFALYLLSLTSNLVNIVLGFLISIYVL--IEKDNIAKMAKTLTYMSLKEKNGSRLVSFIR 215 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 K+I I ++ G + + VP L +I I MIP P+ + Sbjct: 216 TYNKMIGMYVGIKAIDSMIIGSLALIGLTILKVPYAPLLALIVGITNMIPYFGPLVGIVI 275 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 S + + + A + + L P L+G + + L FG+ G +G Sbjct: 276 SFVVTLFSSPLQAVVVAMLLFALQQFDAWYLEPKLIGKKVGVSPLGIIFGVTLGGGILGP 335 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G+ +G MA + + + + KE+ +++ Sbjct: 336 VGMILGSPTMATARIYYNKLVDRFKESNKELVEK 369 >gi|42783519|ref|NP_980766.1| hypothetical protein BCE_4473 [Bacillus cereus ATCC 10987] gi|42739448|gb|AAS43374.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 356 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ + Y Sbjct: 43 ITPFLIACFIAYLLHPLIEKIHKEGMPR--------TLAILLIYILFFGGIGYGIYKGTP 94 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++ ++ N+ + G+ T + K+ I + Sbjct: 95 VVIKQLQEINEQFPQFTKMYDSWMDGVTEQ---TANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGIAIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVGGIVGLLI 331 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 332 SVPILAVIRTV 342 >gi|238897271|ref|YP_002922948.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465026|gb|ACQ66800.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 354 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 124/354 (35%), Gaps = 20/354 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + +I+ LYFL G AP+L A+++ + WP +S + S Sbjct: 10 RRHFTDPQVVALLIILVGGFCILYFLSGILAPLLVAIVLAYLLEWP--TSKLQVLGCSRL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + ++ + + + L S + L+ Sbjct: 68 CAVSIIQALFVGVGLLAIFVVVPNVWQQGMNLTSDMPKMLNQFNNFSSTLTK-------- 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T + + + D + + + + L + +I + + +FF +D Sbjct: 120 RYPTLVDAGIVDMIADNLRNRLAGVGDSVVKISLASLIGLLTLAIYLIVVPLMVFFLLKD 179 Query: 181 GFSIS---QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + Q++ L WK++++ + IR L M I+A+ +W+ Sbjct: 180 KKQMLNNFQKILPRDRSLAGKVWKEMNQQITNYIRGKVLEMVIVAVA----TYLVFWILD 235 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKT 295 + + L V+ +IP GA I V + + + I + L + + + Sbjct: 236 MRYSLLLAVLVGFSVLIPYIGAVIVTIPVVLVAMFQWGIDAHFWTLLIAYLVVQALDSNL 295 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P L + L L ++ G G+F L +L+ + + + Sbjct: 296 LVPVLFSEAVNLHPLMIILSVIIFGGLWGFWGVFFAIPLASLVKAVIQAWPKEL 349 >gi|188584262|ref|YP_001927707.1| hypothetical protein Mpop_5076 [Methylobacterium populi BJ001] gi|179347760|gb|ACB83172.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 675 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 110/363 (30%), Gaps = 34/363 (9%) Query: 11 IMRWMIMFIILVSLYFL-KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + MI+F I+V+ FL + P+ A+++ F P+ + + +A + Sbjct: 26 LASSMIVFAIIVAGLFLGREVLIPIAIAVLLSFVLGPLVNFLRRLRLGR-----AVAVLV 80 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + L +++ EL V + L + G + + + Sbjct: 81 SVLLAAGIIAALATVIGVQVAELAQDVPRYQRTIERKVEGLREGTLGRTMDYIANINRAI 140 Query: 130 PQSLKILSETFLKTNGIDFIP--------------------------RFASRFGMIFLDY 163 Q + E K A+ Sbjct: 141 HQGGEENKEAAEKARREQAARDSTRKTEPEPPKPMLVQVEERRPSPLELATTVLSPVAQP 200 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + +I+ L F + +L L + + FLG + Sbjct: 201 LATAGIVIVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNS 260 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCL 281 G+V+G W+ GVPS V G+ +M +P +++ + Sbjct: 261 AFGVVIGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVVAT 320 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FL AI IV + + P + G L + G +GL + L + V+ Sbjct: 321 FLLFAIVEPIVGQIIEPLVYGHSTGLSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVL 380 Query: 342 WKE 344 + Sbjct: 381 GRH 383 >gi|257870155|ref|ZP_05649808.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257804319|gb|EEV33141.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 391 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 111/338 (32%), Gaps = 7/338 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + P L LI+ + P+ +KK + I + ++ + + Sbjct: 35 ISFLFDPFFVIISTLIPPFLFGLILYYLFNPLVDRLETKKIPRIVSIGGIYLLILLVIVL 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L +L++ P G ++ ++ Sbjct: 95 AGFQLYPIIQKQTTDLINQFPDLIADFERNADSFLANTPFGAQIDQITDTLQKVANNIMD 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + +T S +++ I FF R+ L S+ Sbjct: 155 FIGDYWQTGAAGL-----SSIFSTISTLFIALFTGPIIAFFLLRNPNKFYYSLLSIVPPR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + I +I + + G I + G + + L G+ L + I+ +IP Sbjct: 210 FRKDFNTIVKIADLQVGAFLKGQIISSFILGGIYWVIFLLIGLEYASILAIAAGILCIIP 269 Query: 256 GGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P ++++ + + L W A++L D + P ++G +++ + Sbjct: 270 YIGPFIVFFPALFIAAQDSTGMLIKFLIAWFAVQLLHGDLVV-PRVMGDRLQIHPITILV 328 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ V+ K+ Sbjct: 329 VLLVMGDLMGIVGVIFGIPIYCLLKVLVVYGFRKFKQR 366 >gi|332179279|gb|AEE14968.1| protein of unknown function UPF0118 [Thermodesulfobium narugense DSM 14796] Length = 341 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 120/340 (35%), Gaps = 14/340 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ I + L+ K F VL ALI P KK F ++I SV+ + Sbjct: 13 LLIAITIFLFVFKDFIIQVLLALIFAIVLSPPVDFLEKKKIPR-FFGSLIVFFSVISFMV 71 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L E+++LV+ P +L + + Sbjct: 72 IIYLLTAPILNFEIQKLVASF----------PEYLKNFDDAFQNFLANLQINPGHYIWLN 121 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L L+ + ++I + G D +S + I FF +D +++ + + Sbjct: 122 LILQKLRDHFQEWIGNVLNVVGASTFDLINKAISWLVFPILTLFFMKDLPILAKGILEIF 181 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +I + IR+ G I+++ G + G + G+ + LG + AI+ Sbjct: 182 PQSKRTLITEIGSCLTHGIRAYVKGQLILSVIIGFLTGLGLFFLGIEYFLLLGFLAAILE 241 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP P+ + ++ + I + A + ++ + + + P ++ I +P Sbjct: 242 FIPYLGPMLASIPALIISIAISPLKAFIVLIFYIVLHQLEGVIIAPNIMSKSIDVPPSLV 301 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + G+ + L A+ +++ N Sbjct: 302 IIVLTIAAALGSIPGMLLSIPLTAISKSLYEYWQKNRTNN 341 >gi|312135146|ref|YP_004002484.1| hypothetical protein Calow_1121 [Caldicellulosiruptor owensensis OL] gi|311775197|gb|ADQ04684.1| protein of unknown function UPF0118 [Caldicellulosiruptor owensensis OL] Length = 354 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 120/359 (33%), Gaps = 16/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISK 54 M L + + + II + +YF P L AL + + P +K Sbjct: 1 MHIIKLVKRYFTDILFIAIIAIVIYFFANMKAFWPILIPFLIALFLSYLLKPCVDFLETK 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 I+ + + + + Y + +++ I + + Sbjct: 61 IRSRD-----ISILIWFAIIFGITVMVCVYFIPLFVNETKQLIQNVPEYIALIQKWFYEI 115 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++L + I +E K F+ L + + I Sbjct: 116 DSKLLNKLNIDIKEILNANSINTEAVSKQTLSIFL-----NIVKSISSNILYYLLIPIIS 170 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ RD + + L + I + +V+ G + A+ GL+ + Sbjct: 171 FYILRDWKRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAVIVGLLSFFGFS 230 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L V LGVIT I +IP PI + ++ + + + A + ++ + + Sbjct: 231 LLSVRYAALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVVFLVLLQQVDSF 290 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 291 IISPRVIGSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|54027467|ref|YP_121709.1| hypothetical protein nfa54930 [Nocardia farcinica IFM 10152] gi|54018975|dbj|BAD60345.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 422 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 98/301 (32%), Gaps = 13/301 (4%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + ++ V + L + F+ + + +L +V + + WL + Sbjct: 72 QRLGVPRWIGVFVSLVGSLGLVAGIMTFVVEQFVAGVPQLSDEVTASIHK---IQDWLIN 128 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 P + ++ + ++++ ++ + A + + Sbjct: 129 GPPHLSDEQIRNAGDALVKAIQSNQDS---------VTSGALTTATVIGHILTGTFLTLF 179 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L FF G I + + + + + + +A + + +G+ Sbjct: 180 ILIFFLYSGDQIWEFVTRIVPTKHRERVRLAGELGFGTLVGFVRATVAVAAVDAIGIGAG 239 Query: 233 YWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + GVP + L + I A IP GA ++ L+ + A + + + Sbjct: 240 LAILGVPLALPLASLVFISAFIPIIGAFLAGFIAVFIALVTKGLVTALIVLGIIIAVMQL 299 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+P L+G + + L + G+ G+ G + +A++ + + E Sbjct: 300 ESHVLQPLLLGRAVSIHPLAVVLAIAAGLVLGGIAGGLLAVPFVAVMNTAIRSLLAESPE 359 Query: 352 N 352 Sbjct: 360 E 360 >gi|154496526|ref|ZP_02035222.1| hypothetical protein BACCAP_00818 [Bacteroides capillosus ATCC 29799] gi|150274159|gb|EDN01250.1| hypothetical protein BACCAP_00818 [Bacteroides capillosus ATCC 29799] Length = 415 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 115/334 (34%), Gaps = 9/334 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT---VSVMCLFIVPLLFLFYYGMLE 88 P+L + + + S + S A+ + V ++ FI L L Sbjct: 81 TPLLLGCALAYVLNILMSFYERHYFTHSVSPAIRKSRRPVCMLAAFITLAAGLILILNLV 140 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWA--SELWTKHLSHPQSLKILSETFLKTNGI 146 + EL S V L + P L++ G M A +L + + K+ T G+ Sbjct: 141 LPELFSCVNLLLRQIPPAANSLANWLGTMDAVPEDLLASLRNVDWASKLEQIISFLTTGV 200 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL----FPAYWKK 202 I A ++ F +I + + Q + + + + Sbjct: 201 GNIIGTAVSAVSSVFSGLVTAFFALIFSIYLLLGKERLGSQFNRIIKRYMSTGLCSNVHH 260 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + ++ + +G A+ G + + +P G + A A+IP Sbjct: 261 VLSVLNECFHKYIVGQCTEALILGGLCTLGMLILQLPYATMTGAVIAFTALIPVAGAYIG 320 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V ++++ + A ++ I + + P +VG + LP + + G Sbjct: 321 AGVGAFMILTVSPIKAIIFLIFIVILQQLEGNLIYPRVVGSSMGLPGIWALAAVTVGGGV 380 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ + L A + + +E + I +E + Sbjct: 381 MGIPGMLLCVPLAAAVYKLLREDVNRIPNKEEAL 414 >gi|309779659|ref|ZP_07674418.1| acetyltransferase, GNAT family [Ralstonia sp. 5_7_47FAA] gi|308921600|gb|EFP67238.1| acetyltransferase, GNAT family [Ralstonia sp. 5_7_47FAA] Length = 352 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 126/344 (36%), Gaps = 8/344 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ Q + ++ I V ++ L+ P L +I + P +++ Sbjct: 2 SALIRRQAWLWGLVALAIGVLMWALRPVLTPFLLGALIAYMLQPGVEWL-ARRGLPRWIA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ + + + + +F E +L +K+ + WL P Sbjct: 61 ALVMILCFAAMAALLVTLMFAVVQTEGPQLQAKIPAL---LATLNAWLR--PKLAVFGLG 115 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L H + L + N I ++ G L +++ + + LF+ D Sbjct: 116 VDLDLPHLRDLLAGPRYGGEGNSAIAIWQYLRTSGNAMLTVVGNVVLVPLVLFYLLYDRH 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++++SL + A + + +++ G ++ + A LAG + Sbjct: 176 QMFRRMESLVPRRWLAKTQAFVIDIDRMLSQYLRGQLLVMVVLAAFYPIALTLAGFEIAL 235 Query: 243 ALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG+ T + IP G A AV +L G+++ + + + + + L P L Sbjct: 236 PLGLFTGLAVFIPYVGFAAGLALAVLAAVLQFGDLYGIGAVAVVYGLGQILENVFLTPRL 295 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G I L L F L+ G G+ + A++A +E Sbjct: 296 IGERIGLHPLAVIFALLAFGHLFGFFGVLLALPASAVLAAALRE 339 >gi|291452564|ref|ZP_06591954.1| integral membrane protein [Streptomyces albus J1074] gi|291355513|gb|EFE82415.1| integral membrane protein [Streptomyces albus J1074] Length = 358 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 114/333 (34%), Gaps = 33/333 (9%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW--------PIYSSFISKKEESSTF 61 + W ++ +++ + ++ + + A +I P++ + + + + Sbjct: 7 RVAGWCVVLLLVTGVAWVAVWLCVLFRAAVIPVLLALLGTALLTPLHRRLLRMRVQR-SL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + +V+ + + + ++V+ LA Q + Sbjct: 66 AAGLTCAAVLVVVGGATYIVVLALVDSGDQIVASAKLAAQD----------------VAG 109 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L + G S G++ + + ++ +FFF RDG Sbjct: 110 FLGADEASLDDLASNARELFDRFGGPAASGVISGLGLVAQAGAMG-VLAVLLVFFFIRDG 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L ++ + I R + + G T+IA+ +G++ L GVP Sbjct: 169 DRVVGSLRTMAPGHVGEITEAIGRRAYRAVEGFMRGTTMIALIDGVLTTIGLLLLGVPGA 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV----DKTLR 297 LG + I A IP +++ + + + W + +F+V L+ Sbjct: 229 AGLGALVFIGAYIPYLGAFVSGVLAVLVALAD---RGVVIAAWTLLVIFLVQMLEGNVLQ 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P + +++ + G G++G+ + Sbjct: 286 PVIQSRTVQMHPAVVLVAITAGATVGGVIGVLL 318 >gi|88657814|ref|YP_507702.1| hypothetical protein ECH_0910 [Ehrlichia chaffeensis str. Arkansas] gi|88599271|gb|ABD44740.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Arkansas] Length = 379 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 125/352 (35%), Gaps = 14/352 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R +I+ I++ ++ +K AP +A+I+ + P+ + + S I +S Sbjct: 19 VTRSVIVLAIVLVMFVIKPVLAPCCTAMIMAYLLNPLVDKL-QRFKLSRQLSVAIILLSS 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVL-----ANQHGIPVPRWLSDIPGGMWASELWTK 125 +C+ I L+ ++ L+ ++ I + + + I + + Sbjct: 78 LCVIIAFLVSFIPLAYSQLLSLIKFLMEKVPLIHKDSIISLLQKYNMIDYEEVSDAIKLP 137 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI------IALFFFYR 179 S L + L + +F+ + + LF+ Sbjct: 138 QASLKSLLHYENIKPLVSIFGNFLKNLDGILFSAINSSISISYTISIILITPLLLFYILC 197 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + SI + D+L + + + ++ + +VI + G + + + L + Sbjct: 198 NWPSIVESADALVPVKYQSIARLYTKKIDQVISAYIRGQLSVCFIMAVYYIICFSLVKLK 257 Query: 240 SHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +G ++ IM IP PI + + +L + + + + + Sbjct: 258 YFLIIGFVSGIMTFIPYIGPISCAILSSITTMLQFNDWTMCGVVVTMFIVGQLVESNIIT 317 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P L+G + + + G++ +G G+ + + A++ V + I Sbjct: 318 PLLIGKRVDIHPIWIIIGMITCGSQIGFTGVLLSIPITAIVGVFVRALIAHY 369 >gi|319404185|emb|CBI77778.1| permease protein [Bartonella rochalimae ATCC BAA-1498] Length = 385 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 118/344 (34%), Gaps = 13/344 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + +V ++ L P ++ +++ + PI F K F ++ Sbjct: 27 MKKQIFFWLGTLIFFIVFMFILGSILFPFIAGIVLAYFLNPIVQIFE-KIGIHRVFGTIL 85 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +F+V L+ L ++++ +S + + + S + Sbjct: 86 ITLFIIIIFVVSLIILIPIISGQIQQFISNGLPIYVNR------IQTFFVEHNFSWVRRY 139 Query: 126 HLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S P L + L + I + + G ++ + + F+ D Sbjct: 140 FDSDPNELHTNIKVLLGQSSDFITSLLNSLLKSGKSIVNIISLFVVTPVVTFYILLDWPH 199 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +DS + + + + + G + + + G+ + Sbjct: 200 MVEVVDSWIPRSHLTTVRSLFHEMDRAVAGFVRGQGTVCLILAGYYAIGLTITGLNFALL 259 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G+ +++ IP + +SI + N + + I FI L+P Sbjct: 260 IGMFVGLISFIPYIGTMIGFILSIGVAWVQFYPDNWGWVIIVMIVFFIGQFIEGYILQPK 319 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG + L + F L G G+ + A+I V+ + Sbjct: 320 LVGSSVGLHPVWLMFALFAFGSLFGFTGMLVAVPAAAIIGVLVR 363 >gi|307709108|ref|ZP_07645567.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307620054|gb|EFN99171.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 369 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 103/311 (33%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + + PI + + + ++ +++ ++ +++L + ++ Sbjct: 42 MIPFLLGGFLYYLTNPIVNFLQKYFKINRIIGILLTLCALVWGLVIGVVYLLPILVNQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L++ + LS P + LS + N ++ + Sbjct: 102 SLIATSQTIYSRLQDLIMDLSTYPAFQNLD------IQATIQQLNLSYVDILQNILNSVT 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L II + L +F DG L+ + + + + Sbjct: 156 NSVGSVLSALFSTVLIIIMTPVFLVYFLLDGNKFLPMLERTVLKRDKLHIAGLLKNLNAT 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G+ I AI G + Y + G+ + + + + +IP P I Sbjct: 216 IARYISGVAIDAIIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYVGPSIGLIPMIIAN 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + ++ I + L P +VGG +K+ + L+ G++G+ + Sbjct: 276 VFTDPHRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLLSSNIYGVIGMIV 335 Query: 331 GPVLMALIAVI 341 +++ I Sbjct: 336 AVPTYSILKEI 346 >gi|153006305|ref|YP_001380630.1| hypothetical protein Anae109_3462 [Anaeromyxobacter sp. Fw109-5] gi|152029878|gb|ABS27646.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 418 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 51/376 (13%), Positives = 125/376 (33%), Gaps = 23/376 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLK-GFFAPVLSALIIGFTSWPIYSSFISKKEES----ST 60 Q + +++ ++ +++ + P + A + + P+ S + Sbjct: 18 PRAQLLALTAVIWALVAAIFVIAWPVLLPFVLAALAAYVIDPLISRLARTRVGGHAVPRW 77 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPG--- 115 V+ + + L + + +F E + ++ P + W I Sbjct: 78 GAVVVVYLGIGALAYLAGVSIFPQIYREAVRGLVELRDFLASVTPEKIDAWARAIDAFLE 137 Query: 116 ------------GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 G ++ L+ + + + + + F+ Sbjct: 138 QYGIPVDVLPYEGPRQGARFSVDLAAGIAAALRDASESMRGRVGDVVAFSRAILAGTFQA 197 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 I + + F D I + ++L ++++ + + G I + Sbjct: 198 MFFSILLFMLTAFISMDAPRIVRFFETLFPTQARDDFRRLLHGIDSGLAGVVRGQLTIML 257 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 G++ + VP ALG + I+ ++P G +S + + L G + A Sbjct: 258 VNGVLTLIGLLVIQVPFAFALGALATILYVVPIFGTILSSIPIVLLALTAGGLSKALLAL 317 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 W + + L P ++G K+ + LV G RT GL+G + + +++ I+ Sbjct: 318 GWILVIHALEAYVLNPKIMGDASKIHPVLIVLALVIGERTWGLVGALLAVPVASVVVAIF 377 Query: 343 KESIMAIKENKEKISS 358 + + E E+ + Sbjct: 378 RFLHRKLAELDERAAQ 393 >gi|22537260|ref|NP_688111.1| hypothetical protein SAG1102 [Streptococcus agalactiae 2603V/R] gi|22534128|gb|AAM99983.1|AE014242_12 membrane protein, putative [Streptococcus agalactiae 2603V/R] Length = 377 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 124/336 (36%), Gaps = 19/336 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI----ATVSVMCLFIVPLLFLF 82 + F A II +Y K + S L I + + FI +++LF Sbjct: 39 IFPFLMGAGIAYIINIVMS-VYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLF 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ---SLKILSET 139 + ++ +S +++ + + + ++++ SE+ + +L S+ Sbjct: 98 SIVIPDLISSLSSLLVIDTGALA--KLVNNLNENKQISEVLNYMGTDKDLVSTLSGYSQQ 155 Query: 140 FLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK + S L+ +S IF I L + + +Q + L + Sbjct: 156 ILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVL----ANKEQLGRQFNLLIDTYLG 211 Query: 198 AYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I+ + F+ T+ A+ G + + P + +GV+ A A+I Sbjct: 212 STGKTFHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALI 271 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + L+ ++ A L+ + + P +VGG I LP + Sbjct: 272 PVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLM 331 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G G+LG+ + + A I I K+ I+ + Sbjct: 332 AITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQ 367 >gi|34581399|ref|ZP_00142879.1| putative permease perM homolog [Rickettsia sibirica 246] gi|28262784|gb|EAA26288.1| putative permease perM homolog [Rickettsia sibirica 246] Length = 351 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 118/350 (33%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTVIFWLVFLGFFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLMIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|313903596|ref|ZP_07836986.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] gi|313466149|gb|EFR61673.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] Length = 458 Score = 80.3 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 109/314 (34%), Gaps = 5/314 (1%) Query: 17 MFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++ + L F + A ++ F P S + ++ V L Sbjct: 37 AGVLWLAWWVLSHFGRTLTLLGLAGVLAFLLEPAVSFLERGMRSRALAALLLYLAFVALL 96 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + +++L + +EL V Q L + PQ L Sbjct: 97 ALG-VVYLAGPIKEQAQELFWSVPRYRQQVAEAVPVLQKYMELLREFLARYGVSVEPQDL 155 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I +++ ++I++ + DG +++Q+ Sbjct: 156 AGQFLQRVAGSTNRILAGLTAVVTGIGTTLANAVLVLVISI-YLVVDGSGLNRQMLGYLP 214 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ + +V G ++ + G+V+G L G+P LGVI +M + Sbjct: 215 ARYRRPVRRAQAVALRVFGGYLRGQLLLGLIIGVVVGIGLSLLGIPYPALLGVIAGVMEL 274 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + +I + + + L+ + + L P + G + L L T Sbjct: 275 LPIVGAVLGAIPAILVALFQPWPAVLYVTLFFIVVQQVEGNLLVPRITGQAVGLHPLATL 334 Query: 314 FGLVGGVRTMGLLG 327 L+ G G+LG Sbjct: 335 LALLAGYEVAGILG 348 >gi|315637759|ref|ZP_07892961.1| acid membrane antigen A [Arcobacter butzleri JV22] gi|315477980|gb|EFU68711.1| acid membrane antigen A [Arcobacter butzleri JV22] Length = 348 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 125/349 (35%), Gaps = 24/349 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ + F + ++++ + + K ++ + T+++ LF + Sbjct: 12 ILLLFFMVELFNPFLKAIFVSVLLTIATSSLTLHLEHKLKKR-LVATSVMTIALAALFFL 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P+L+ ++ +V++ N I + L L + Sbjct: 71 PILYCILSFATFFNQVDQQVLVKNLDEIKL-----------LVHNLSMDFTFLNDFLNNI 119 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + I ++ G + + II +++ FFF I+ + L + Sbjct: 120 TSKIDVGKTVQDIVSISANLGKNSVKFMFDIILILVFFFFFTLYTTQIATFIRDLLP-IK 178 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + V+ + AI EG + G G + GV+ ++IP Sbjct: 179 KEDSIILFHESSSVMTVVLYSTLVTAIFEGFLFGFFLTFFGYDG-LLFGVLYGFASLIPV 237 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVG--------GPIK 306 G I + ++IY + NA + ++ + + I D ++P ++ P Sbjct: 238 VGGVIMWLPIAIYEASINSFTNALIIAIYSIVVISIIADTFIKPMIINYINKKIIKTPTN 297 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L FF +V G+ T G G+ IGP +++L I + KE Sbjct: 298 VNALLIFFSIVAGLSTFGFWGMIIGPAMVSLFISIMNLLKKYSDDFKES 346 >gi|76787648|ref|YP_329808.1| hypothetical protein SAK_1187 [Streptococcus agalactiae A909] gi|76562705|gb|ABA45289.1| membrane protein, putative [Streptococcus agalactiae A909] Length = 377 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 126/344 (36%), Gaps = 19/344 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI----ATVSVMCLFIVPLLFLF 82 + F A II +Y K + S L I + + FI +++LF Sbjct: 39 IFPFLMGAGIAYIINIVMS-VYERLYVKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLF 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ---SLKILSET 139 + ++ +S +++ + + + ++++ SE + +L S+ Sbjct: 98 SIVIPDLISSLSSLLVIDTGALA--KLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQ 155 Query: 140 FLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK + S L+ +S IF I L + + +Q + L + Sbjct: 156 ILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVL----ANKEQLGRQFNLLIDTYLG 211 Query: 198 AYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I+ + F+ T+ A+ G + + P + +GV+ A A+I Sbjct: 212 STGKTFHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALI 271 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + L+ ++ A L+ + + P +VGG I LP + Sbjct: 272 PVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLM 331 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+ + + A I I K+ I+ + + + + Sbjct: 332 AITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRART 375 >gi|146302325|ref|YP_001196916.1| hypothetical protein Fjoh_4598 [Flavobacterium johnsoniae UW101] gi|146156743|gb|ABQ07597.1| protein of unknown function UPF0118 [Flavobacterium johnsoniae UW101] Length = 363 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 119/351 (33%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+L LY ++ + +LI+ + P+ +K + S++ A + Sbjct: 13 RALATILVIGIVLYFLYEIQTVIVYLCVSLILCLIANPLVLFLKNKLKFSNSMAAATTII 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + +L + + L + + E + Sbjct: 73 FFIFLIVGFILLFVPLIISQANNLA---------LLDTAHLQTKFMETEKHLEEYFNIQH 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I + RF + D + ++ + FFF +D Q Sbjct: 124 IDLNKVIKDSKLTSVLDFSYFTRFINSIINFMADMGMGLVSVFFITFFFIKDQTIFKDQA 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ F+G+ + I ++ + G + + + Sbjct: 184 RRILPDSNEDKILNSITKINHLLTRYFIGLLLQLIVVFILYLIVLLIFGNKNAFVIAFLC 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLI--------KGNIFNATCLFLWGAIELFIVDKTL-RPF 299 AI+ +IP PI T ++ L + + I T + G + + +D + +P Sbjct: 244 AILNIIPYLGPIIGTTLAAILTMISMIGQDFQSEILPKTIYVVIGFLVVQAIDNNISQPI 303 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L F ++ T G++G+ I +I VI KE K Sbjct: 304 ISSKSVNSHPLEIFLIILISGITFGIVGMIIAVPAFTMIKVILKEFFPNNK 354 >gi|297561747|ref|YP_003680721.1| hypothetical protein Ndas_2803 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846195|gb|ADH68215.1| protein of unknown function UPF0118 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 441 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 107/313 (34%), Gaps = 14/313 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A+ + PI + +K IA + + +F + + + L Sbjct: 91 PVILAVFLTALLMPIANGL-RRKGLGRGLSTTIALLVGLIVFGGVISLIVTPAIQGFGPL 149 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V V A L DI L+T + + + T D + Sbjct: 150 VDSVTSAITE-------LQDIRLPFVDPALFTDMIDDAWAQIQS----MITENQDQLLSG 198 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A + + I+ +I +F G + L +L + + V+ Sbjct: 199 AWTATSAVISVLVGIVLIIALTVYFVHSGDQLMDWLVTLLPARSRPGMRHAGDVAYGVMG 258 Query: 213 STFLGMTIIAIGEGLVLGSAYWLA-GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 G+ + + + +G A + + + L V+T + A +P GA ++ ++ Sbjct: 259 RYVRGVAAVGFFDAVGIGIALVIFLDINLAIPLIVLTFVGAFLPIIGAFLTGLLAALVAF 318 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A + + + P + G + LP G+ G G+ G+F+ Sbjct: 319 VTEGWVVALIIVGAVLLVQQLESNVFAPRIYGASLDLPSPVVLIGISVGAVVGGIPGMFL 378 Query: 331 GPVLMALIAVIWK 343 ++A++A + + Sbjct: 379 STPVVAVLAALLR 391 >gi|88811527|ref|ZP_01126782.1| hypothetical protein NB231_12349 [Nitrococcus mobilis Nb-231] gi|88791416|gb|EAR22528.1| hypothetical protein NB231_12349 [Nitrococcus mobilis Nb-231] Length = 373 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 121/358 (33%), Gaps = 11/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + +++ L + F+ APV+++L+I + + S + + Sbjct: 10 RHLNDPQVVALALVLLGGLGIILFMGDMLAPVIASLVIAYLLEDLVQSLERYRVPRRMGV 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + + +V L + +LV + HG + +P Sbjct: 70 VLVFFLFIAVVLLV-FFALIPLISRQFAQLVENLPDILDHGQMA---ILRLPEKYPQFFS 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + L+ S G + + + + ++ + ++ + +FFF D Sbjct: 126 VDQVKTLMEELRSESLQI----GRNVLASISFQSVVMLFMGAIYLVLVPFMVFFFLMDKE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L + + I V I S G + + G+V + L G+ Sbjct: 182 QIQAWLSRFLP-VHRSLIATIWCEVDAQIGSYVRGKLLEIVIVGVVTYVTFALLGLQFAA 240 Query: 243 ALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V T + +IP G A ++ I G + + I + L P L Sbjct: 241 LLAVATGLSVIIPYVGAAVVTAPVAVIGYFQFGPSSEFVWVLIAYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +KL + ++ G G+F L LI I E K + Sbjct: 301 FSEIVKLHPVAIIIAILVFGGIWGFWGVFFAIPLATLIRAIILAWPGFADEADSKDAH 358 >gi|293399736|ref|ZP_06643882.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306136|gb|EFE47379.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 390 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 102/322 (31%), Gaps = 2/322 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 LK F ++ A + + + +A + ++ ++ I + ++ Sbjct: 47 LLKPFIYGIMMAFVFNLPMKYFMKKLPASLGKGKRAVAALLSLIIIIGVITFIFWIVMPQ 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ ++ + + + E K + + NG Sbjct: 107 VIHSVTTLANALPGYLEEVQKN--IQTAIENKQIPEEVLKQIETYAMDIQKMAVNIVKNG 164 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + AS F + ++++ + R + L + Y K++ Sbjct: 165 LPHLIDMASGFASSIANIFMALVIAVYLTISKNRLITQAKEFLYAFTSKRVNEYLLKVAH 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G + AI G++ + P L VI +IP I + Sbjct: 225 LTNVTFANFVTGQLVEAIIIGILCYIGCLILQFPYAPILSVIIGCTNIIPIFGAIFGVGL 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 S L+ + L+G + P +VG + L L F + G G Sbjct: 285 SALLVAFVDPLQGIFFILFGICLQQFESNLIYPRVVGNTVGLSGLWVLFAITVGGGFFGF 344 Query: 326 LGLFIGPVLMALIAVIWKESIM 347 G+ +G + ++I + +E + Sbjct: 345 AGMLLGLPIFSIIYALLREEMH 366 >gi|269797532|ref|YP_003311432.1| hypothetical protein Vpar_0468 [Veillonella parvula DSM 2008] gi|269094161|gb|ACZ24152.1| protein of unknown function UPF0118 [Veillonella parvula DSM 2008] Length = 373 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 113/335 (33%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ I F + + L+++ + + + + + L Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKCDSGWKYKIRRPLSLLLSFVTISVIVYFIARL 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ V + Q W+ I + + T + Sbjct: 101 ALPQLIHSMSII--VAASPQLYTDFQTWMQHITETIPMASNQTIIDALSGENLAKYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G +I L+ L +IF + L R + L + + Sbjct: 159 GTKGGTYIVNAMGTVLSWTLNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVS 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ + + F+G I A+ G+++G WL + + + + +IP Sbjct: 219 YVTRVAVQTFSNFFVGQFIDALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 279 GGIIGAVMLLTVSPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMLIGVPLVATCYKLIMTDVDGRLASNEGL 373 >gi|168490308|ref|ZP_02714507.1| membrane protein [Streptococcus pneumoniae SP195] gi|183571357|gb|EDT91885.1| membrane protein [Streptococcus pneumoniae SP195] Length = 369 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 108/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLIWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 271 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 331 VGMIVAVPTYSILKEI 346 >gi|220931616|ref|YP_002508524.1| Sporulation integral membrane protein YtvI [Halothermothrix orenii H 168] gi|219992926|gb|ACL69529.1| Sporulation integral membrane protein YtvI [Halothermothrix orenii H 168] Length = 355 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 121/337 (35%), Gaps = 6/337 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ +IL+ +F+ +F+P + A I+ P+ K + +I V ++ + Sbjct: 14 VFVIGVILLKYFFI--YFSPFIIAAILASLINPVVDRLDEKIPVNRGLAVIIVLVLLISI 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ ++ LE+ L+ + + G + + S +L Sbjct: 72 LVLIIILGVSQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQELDISPSVKDAL 131 Query: 134 KILSETFLKTNGIDFIPRF--ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + IA +F RD I+Q + L Sbjct: 132 NNNLQMIYNAIKNGLVKGINGTLNLLGKLPMLLTILFLSFIATYFISRDKDKINQFIMKL 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K+ + + I+ G++ G + G + +G+ +A++ Sbjct: 192 FPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHYALIIGISSALL 251 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP G + F IY +I GN+ A L + + + ++G + + L Sbjct: 252 DLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGA-EGKVMGDNLGVHPL 310 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T L G R MG++G +GP ++ +I + I+ Sbjct: 311 ATMIALYVGYRVMGMIGFIMGPAILVIIKALINAEII 347 >gi|197302448|ref|ZP_03167503.1| hypothetical protein RUMLAC_01176 [Ruminococcus lactaris ATCC 29176] gi|197298346|gb|EDY32891.1| hypothetical protein RUMLAC_01176 [Ruminococcus lactaris ATCC 29176] Length = 418 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 105/324 (32%), Gaps = 10/324 (3%) Query: 16 IMFIILVSLYF------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++F IL + F L GF P + I+ + P+ + + + + + + Sbjct: 14 LLFSILATAAFIVIGIRLIGFLMPFVIGWIVASIATPLVNWLEKRMKIVKKLGSALIVIL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS--ELWTKHL 127 V+ I+ F + E+ L+ + + G++ E Sbjct: 74 VLAAIILVSYFAVSRLVTEVTGLIRDFPDLYEQTETGLEKIGQTLSGVFVRLPEGIQNGW 133 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + A +S I MI++ +FF + Sbjct: 134 TSLVENLDDYMGNLMSKVSEPTVTAAGNAAKKVPYMLVSFIVMIMSAYFFIVQREDVIHW 193 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + F I L+L + + V + + Sbjct: 194 MKGIAPEAVTKRMAMVMDNLKYAVGGYFKAQFKIMGIVFLILLAGLGFLKIHYFVLIAFL 253 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A + +P G + ++Y + G A L + + V + ++P LVG + Sbjct: 254 IAFLDFLPFFGTGTAMIPWAVYEVFMGEYKVAAALLIIYVVTQA-VRQLIQPKLVGDSVG 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFI 330 L L T L G R G++ + + Sbjct: 313 LNPLVTLLLLYIGYRVGGVIWMIL 336 >gi|169833984|ref|YP_001694326.1| membrane protein [Streptococcus pneumoniae Hungary19A-6] gi|172079628|ref|ZP_02709700.2| membrane protein [Streptococcus pneumoniae CDC1873-00] gi|183603137|ref|ZP_02710328.2| membrane protein [Streptococcus pneumoniae CDC1087-00] gi|183603448|ref|ZP_02717170.2| membrane protein [Streptococcus pneumoniae CDC3059-06] gi|183603463|ref|ZP_02715105.2| membrane protein [Streptococcus pneumoniae CDC0288-04] gi|221231652|ref|YP_002510804.1| hypothetical protein SPN23F_07960 [Streptococcus pneumoniae ATCC 700669] gi|225854381|ref|YP_002735893.1| membrane protein [Streptococcus pneumoniae JJA] gi|225856539|ref|YP_002738050.1| membrane protein [Streptococcus pneumoniae P1031] gi|225858673|ref|YP_002740183.1| membrane protein [Streptococcus pneumoniae 70585] gi|225861234|ref|YP_002742743.1| membrane protein [Streptococcus pneumoniae Taiwan19F-14] gi|307127576|ref|YP_003879607.1| membrane protein [Streptococcus pneumoniae 670-6B] gi|168996486|gb|ACA37098.1| membrane protein [Streptococcus pneumoniae Hungary19A-6] gi|172042061|gb|EDT50107.1| membrane protein [Streptococcus pneumoniae CDC1873-00] gi|183571061|gb|EDT91589.1| membrane protein [Streptococcus pneumoniae CDC1087-00] gi|183574547|gb|EDT95075.1| membrane protein [Streptococcus pneumoniae CDC0288-04] gi|183576959|gb|EDT97487.1| membrane protein [Streptococcus pneumoniae CDC3059-06] gi|220674112|emb|CAR68631.1| putative membrane protein [Streptococcus pneumoniae ATCC 700669] gi|225721093|gb|ACO16947.1| membrane protein [Streptococcus pneumoniae 70585] gi|225722598|gb|ACO18451.1| membrane protein [Streptococcus pneumoniae JJA] gi|225725554|gb|ACO21406.1| membrane protein [Streptococcus pneumoniae P1031] gi|225726469|gb|ACO22320.1| membrane protein [Streptococcus pneumoniae Taiwan19F-14] gi|301794007|emb|CBW36405.1| putative membrane protein [Streptococcus pneumoniae INV104] gi|301799865|emb|CBW32440.1| putative membrane protein [Streptococcus pneumoniae OXC141] gi|301801697|emb|CBW34403.1| putative membrane protein [Streptococcus pneumoniae INV200] gi|306484638|gb|ADM91507.1| membrane protein [Streptococcus pneumoniae 670-6B] gi|327390226|gb|EGE88569.1| hypothetical protein SPAR5_0835 [Streptococcus pneumoniae GA04375] gi|332077287|gb|EGI87749.1| hypothetical protein SPAR148_0823 [Streptococcus pneumoniae GA17545] Length = 343 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 108/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 11 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 70 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 71 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 124 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 125 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 184 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 185 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 244 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 245 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 304 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 305 VGMIVAVPTYSILKEI 320 >gi|307704895|ref|ZP_07641786.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307621509|gb|EFO00555.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 369 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 103/311 (33%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + + PI + + + ++ +++ ++ +++L + ++ Sbjct: 42 MIPFLLGGFLYYLTNPIVNFLQKYFKINRIIGILLTLCALVWGLVIGVVYLLPILVNQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L++ + LS P + LS + N ++ + Sbjct: 102 SLIATSQTIYSRLQDLIVDLSTYPAFQNLD------IQATIQQLNLSYVDILQNILNSVT 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L II + L +F DG L+ + + + + Sbjct: 156 NSVGSVLSALFSTVLIIIMTPVFLVYFLLDGNKFLPMLERTVLKRDKLHIAGLLKNLNAT 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G+ I AI G + Y + G+ + + + + +IP P I Sbjct: 216 IARYISGVAIDAIIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYVGPSIGLIPMIIAN 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + ++ I + L P +VGG +K+ + L+ G++G+ + Sbjct: 276 VFTDPHRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLLSSNIYGVIGMIV 335 Query: 331 GPVLMALIAVI 341 +++ I Sbjct: 336 AVPTYSILKEI 346 >gi|260889294|ref|ZP_05900557.1| sporulation integral membrane protein YtvI [Leptotrichia hofstadii F0254] gi|260860705|gb|EEX75205.1| sporulation integral membrane protein YtvI [Leptotrichia hofstadii F0254] Length = 378 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 117/339 (34%), Gaps = 9/339 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ +++ + L F P AL + + P K + S +I+ V+ + + Sbjct: 18 IALILLVVFIAFKLGIFLFPFTIALFLSILTRPFTRFLEKKLKLSKKLSTIISIVTFLII 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + + + E+ +L + ++ I W ++ + + + Sbjct: 78 FFGAIGWGSLKLISEIYKLSQNLNNYSE--IAQKLWSDNMTKIDTYLGNFPSGFTRQVND 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I S + + + F L I I+A FF D I L+ Sbjct: 136 TINSFISSGSARLGIFIKGLINFITSIPTLILYICITILATFFISLDRDEIVAFLEQQLP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL-----VLGSAYWLAGVPSHVALGVIT 248 + I + V+ S I+ + ++ VP + + ++ Sbjct: 196 KSWLDKVFNIKTDMFTVLGSYIKAQIILMTICFFELLIWLNLLSFLKLNVPYPLLMSILI 255 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ +P GA +I +I L + L V + L P LV + + Sbjct: 256 CIIDTLPILGAGTILIPWAIISFALSDIKLGIMLIIIYLFVLS-VRQMLEPKLVSQNLGV 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L T + G + G++G IGPV+M ++ ++ + Sbjct: 315 HPLITLISMYSGFKIFGVIGFLIGPVVMIILKNVFSREL 353 >gi|331003812|ref|ZP_08327304.1| hypothetical protein HMPREF0491_02166 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412004|gb|EGG91401.1| hypothetical protein HMPREF0491_02166 [Lachnospiraceae oral taxon 107 str. F0167] Length = 417 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 122/328 (37%), Gaps = 21/328 (6%) Query: 31 FAPVLSALIIGFTSWPIYSS-----------FISKKEESSTFLAVIATVSVMCLFIVPLL 79 + VL +++ F P+Y K ++S + +IAT++ + + I+ + Sbjct: 52 VSSVLYGVVMAFLMAPVYDKITVWVSEILSSLFPKWKKSGKYAKMIATLACLVILILVVF 111 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + E+ ++ V+ G+ + WL DI +L + + + Sbjct: 112 TLIMMIIPELANSITNVISYAPSGMENLENWLKDILNKNP--DLERLIIGNYLDISERLS 169 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYC---LSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F TN + + + L+ ++II ++ + + ++ Q + + Sbjct: 170 DFATTNVLPNVNTYVKNLSSGVLNALGVIVNIIIGMMVMMYLLNMKTTLVSQAKKIVYAV 229 Query: 196 FPAYWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I++ F +G I +I GL+ + +P + + V+ + Sbjct: 230 AGVRVGNEIVTEARYIKNMFEKFIVGKIIDSIIIGLINYIFMAVIHMPYALLISVVVGVT 289 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P SI LL+ + A +W + + + P ++G LP Sbjct: 290 NVIPFFGPFIGAVPSIVLLLLISPITALQFAIWILVLQQVDGNIIGPKILGQTTGLPSFW 349 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIA 339 F ++ G++G+ I A+I Sbjct: 350 VLFSILLFGGLFGIVGMIIAVPTWAIIY 377 >gi|260772301|ref|ZP_05881217.1| permease PerM [Vibrio metschnikovii CIP 69.14] gi|260611440|gb|EEX36643.1| permease PerM [Vibrio metschnikovii CIP 69.14] Length = 357 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 106/325 (32%), Gaps = 14/325 (4%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 AP+L A+++ + WP+ + + T ++ + L +V L + ++ Sbjct: 39 IAPLLVAIVLAYLLEWPVTQ--LCRLGIPRTLSVLVIVSLFLGLMLVALFGIVPTIWQQV 96 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++ + + +++ +P S + K + + ++ + Sbjct: 97 INLINDIPNMYN---DLQNFIASLPERYPELANLQIIESLVNNAKNKALSMGESVVKGSL 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 S + +I + + +FF +D + + K+ + + Sbjct: 154 ASLVS-----LATLAVYLILVPMLVFFLLKDKQEMMSIASGVLPR-NRRLATKVWLEMNQ 207 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I + G + + G V + + + L V +IP GA V+I Sbjct: 208 QISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLAVAVGFSVLIPYIGAAAVTIPVAIV 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + + L + I+D L P L + L + ++ G G Sbjct: 268 GLFQWGLTPQYYTLLIAYFIIQILDGNVLVPILFSEAVNLHPVAIIIAVLVFGGLWGFWG 327 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 +F L L+ +W E Sbjct: 328 VFFAIPLATLVKAVWHALPSNDDET 352 >gi|239980705|ref|ZP_04703229.1| integral membrane protein [Streptomyces albus J1074] Length = 359 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 112/333 (33%), Gaps = 33/333 (9%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW--------PIYSSFISKKEESSTF 61 + W ++ +++ + ++ + + A +I P++ + + + + Sbjct: 8 RVAGWCVVLLLVTGVAWVAVWLCVLFRAAVIPVLLALLGTALLTPLHRRLLRMRVQR-SL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + +V+ + + + ++V+ LA Q + Sbjct: 67 AAGLTCAAVLVVVGGATYIVVLALVDSGDQIVASAKLAAQD------------VAGFLGA 114 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L + F I + + ++ +FFF RDG Sbjct: 115 DEASLDDLASNARELFDRFGGPAASGVISGLGLVAQAGAMG-----VLAVLLVFFFIRDG 169 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L ++ + I R + + G T+IA+ +G++ L GVP Sbjct: 170 DRVVGSLRTMAPGHVGEITEAIGRRAYRAVEGFMRGTTMIALIDGVLTTIGLLLLGVPGA 229 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD----KTLR 297 LG + I A IP +++ + + + W + +F+V L+ Sbjct: 230 AGLGALVFIGAYIPYLGAFVSGVLAVLVALAD---RGVVIAAWTLLVIFLVQMLEGNVLQ 286 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P + +++ + G G++G+ + Sbjct: 287 PVIQSRTVQMHPAVVLVAITAGATVGGVIGVLL 319 >gi|296140794|ref|YP_003648037.1| hypothetical protein Tpau_3110 [Tsukamurella paurometabola DSM 20162] gi|296028928|gb|ADG79698.1| protein of unknown function UPF0118 [Tsukamurella paurometabola DSM 20162] Length = 414 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 114/325 (35%), Gaps = 19/325 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I + ++ V ++ + F++ PV+ A+++ WP + F +A Sbjct: 37 SIRIVAVAAMLFVVVWVIGEFWSILLPVMLAVLLCTVLWPPVRWLRDR-----GFPPALA 91 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTK 125 T +V+ L + L + + ++ + G+ + W+ P + ++ Sbjct: 92 TATVLLLALGILGGIIGAIAPSITSQSQQIADSAVAGVRKIQEWVQGPPLNLQDEQISNF 151 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S Q L+ +E+ I ++++ + + FFF +DG Sbjct: 152 VNSITQKLQSSAES---------IASGVFTGVSAAGSVVVAVVMVAMLTFFFLKDGDKFL 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + ++++ + + +G + VP AL Sbjct: 203 PWMRRHSGTPISEHLVELLSRIWATLGGFIRTQALVSLIDAVFIGLGLVILDVPLAYALA 262 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT + IP GA ++ + L+ A + L + L P L Sbjct: 263 VITFLGGFIPIVGAFVAGALAVVVALVTNGFTTALLVLLVVIAVQQLEGNVLSPMLQSRS 322 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + + G G++G F Sbjct: 323 MNLHPVVVLLAIAFGGTQFGIIGAF 347 >gi|224283818|ref|ZP_03647140.1| hypothetical protein BbifN4_08325 [Bifidobacterium bifidum NCIMB 41171] gi|313140972|ref|ZP_07803165.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313133482|gb|EFR51099.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 534 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 111/338 (32%), Gaps = 19/338 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVS 69 +I+ + ++ G + ++ ++I P+ S + + ++ + Sbjct: 35 TVIVVFAAIFVWTSWGKISTIVLDVVISIFIALAVEPLVVSMVRH-GWKRGLASAVSLIG 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L + ++ +V + + + + + Sbjct: 94 LAVIVMALLTLFGNMFVQQLISMVKGLPSIYTEIVDA------------VKQYTSFDMPK 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++L + ++T+ I A M + L+++ +++ ++ G + + L Sbjct: 142 IENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLLTVLMVTYYISAAGPKMRRSLC 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +V + I +I+A + VP + L + Sbjct: 202 QWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATCTAVFLEIIHVPYWLPLALFCG 261 Query: 250 IMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I++ +P G I ++ ++ + ++ + I + L P + + L Sbjct: 262 IVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFIIVYQQIENLILSPKVSQRTMDL 321 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F ++ G LG F+ + A + I+K Sbjct: 322 NPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVY 359 >gi|118443011|ref|YP_877809.1| permease [Clostridium novyi NT] gi|118133467|gb|ABK60511.1| permease [Clostridium novyi NT] Length = 368 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 115/332 (34%), Gaps = 9/332 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L + P A I + P+ F K F +I + ++ + + Sbjct: 30 VFASGLSVVLSILTPFFWAFGIAYILNPLMIYFEKKFNLKRCFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L++ + + I W S L + + + Sbjct: 90 TIISPAIISNVGKLLNDMPIY---VIKTQAWFYATINKFNLSN--NTTLIQFANKGLTNI 144 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T T+ + A + F L +IF I + +D S + + +F Sbjct: 145 TTTLTDSLKSFLNVALSNAIDFTSSFLKMIFGFIISVYILKDKESFQRNAKNFLYCIFKK 204 Query: 199 Y----WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V + +G +I ++ G++ + P + + ++ I MI Sbjct: 205 ESIDSFLTFGNEVNVIFSQYIIGKSIDSLIIGILCAIGLAILQAPYVLLISLLVGITNMI 264 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P ++ + + + A + ++ I L P ++G + + Sbjct: 265 PYFGPFIGMIPAVLITVFYSPIKAVWVLIFIVILQQFDGWVLGPKILGDKVGVSPFWIIL 324 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ G T G+LG+F+G ++A+I + + + Sbjct: 325 AILVGGGTFGVLGMFLGVPIIAVIKTLLQRFV 356 >gi|186477237|ref|YP_001858707.1| hypothetical protein Bphy_2488 [Burkholderia phymatum STM815] gi|184193696|gb|ACC71661.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 358 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 120/331 (36%), Gaps = 8/331 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I + + L+ L P L I+ + P + ++ A + + + + Sbjct: 21 IALAVGILLWLLSPVLTPFLLGAILAYILQPGVAWMTRRRVPR-GLAASLMILFFVAIVT 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + E+ +L +V + H + WL+ P + + + + + Sbjct: 80 LLGLLVLGVIQKEVPQLKQQVPMFFSH---LHGWLT--PKLAVLGVSDSLDFASIRDMVM 134 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + +++ + + LF+ D ++ ++ Sbjct: 135 GQLEGSAQTVALYAWTSIRTSSNVMITVVGNVVMVPLVLFYLLYDWNAMLARVRGFIPRR 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A ++R + ++ G ++ + +A ++AG + +G+ T + IP Sbjct: 195 WFAKTIHLARDMDHMLSQYLRGQLLVMGVLAVFYAAALYIAGFEIALPVGIFTGLAVFIP 254 Query: 256 --GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G A A+ LL GN + + + + + L P LVG I L L Sbjct: 255 YLGFATGLVLALLAALLQFGNWYGFGAVAVIYGVGQILESFFLTPRLVGERIGLHPLAVI 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + G G+ + + A+++V + E Sbjct: 315 FALLAFGQLFGFFGVLLALPVSAMLSVAFHE 345 >gi|77408721|ref|ZP_00785453.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|77413019|ref|ZP_00789221.1| putative membrane protein [Streptococcus agalactiae 515] gi|77160917|gb|EAO72026.1| putative membrane protein [Streptococcus agalactiae 515] gi|77172696|gb|EAO75833.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|319745113|gb|EFV97438.1| permease [Streptococcus agalactiae ATCC 13813] Length = 377 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 126/344 (36%), Gaps = 19/344 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI----ATVSVMCLFIVPLLFLF 82 + F A II +Y K + S L I + + FI +++LF Sbjct: 39 IFPFLMGAGIAYIINIVMS-VYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLF 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ---SLKILSET 139 + ++ +S +++ + + + ++++ SE + +L S+ Sbjct: 98 SIVIPDLISSLSSLLVIDTGALA--KLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQ 155 Query: 140 FLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK + S L+ +S IF I L + + +Q + L + Sbjct: 156 ILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVL----ANKEQLGRQFNLLIDTYLG 211 Query: 198 AYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I+ + F+ T+ A+ G + + P + +GV+ A A+I Sbjct: 212 STGKTFHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALI 271 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + L+ ++ A L+ + + P +VGG I LP + Sbjct: 272 PVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLM 331 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+ + + A I I K+ I+ + + + + Sbjct: 332 AITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRART 375 >gi|309792249|ref|ZP_07686721.1| hypothetical protein OSCT_2672 [Oscillochloris trichoides DG6] gi|308225790|gb|EFO79546.1| hypothetical protein OSCT_2672 [Oscillochloris trichoides DG6] Length = 395 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 122/364 (33%), Gaps = 19/364 (5%) Query: 9 QGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + RW+++ ++ + +L G P + +++ + P+ + ++ + Sbjct: 14 RRVARWLLVLAAMLLIGWLLLSASGALTPFIIGIVLAYLLLPLVNRLNARMP--RWAAIL 71 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-------PVPRWLSDIPGGM 117 + + + + + ++ ++ +L+S + Q + L+ +P M Sbjct: 72 VVYLGTLIVLVGFFAYIVPPLANQISQLISALPTIAQIQNWSELVMEEYQQILATVPESM 131 Query: 118 WAS-ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 A E L + + + G+ + + + + L + LF+ Sbjct: 132 RAEVEQNIAVLVNNGVTTLRTNFVTYMQGLGTFLINSLLSVVNTVTFLLGFFLIPFWLFY 191 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + LD + + + I+ + G I+ + G G ++ Sbjct: 192 VLMDQQAGVAALDRMLPDWLRPDFWGLVNIIDYDVSGYVRGQLILGLAVGSAAGVGLFIL 251 Query: 237 -----GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 V + L V+ ++P PI ++ L + + + + + Sbjct: 252 ELFGMKVDYILLLAVVAGFTELVPVIGPILGAVPAVILGFMDSPTTGIAVVILYILIQQL 311 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L P +VG + L LV + GLLG + L A+ ++ + E Sbjct: 312 ENNFLVPRIVGDSVGLHPAILMVLLVVCSQVFGLLGAILSAPLGAISRDLFSYLYGRLSE 371 Query: 352 NKEK 355 Sbjct: 372 PPSP 375 >gi|209524938|ref|ZP_03273483.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] gi|209494587|gb|EDZ94897.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] Length = 351 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 128/353 (36%), Gaps = 22/353 (6%) Query: 3 ETMLNPQGIMRWMIMFII-LVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEES 58 E L+ ++R++++F + F+ F + A I F S Sbjct: 10 ENFLSNSRLVRYLLLFAFGWAFIQFIAYFQTIIIVFVFAAIFAFLLNYPVQWLQKYT--S 67 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 T V+ ++ + L I + L + E+++ VS+ + + + + Sbjct: 68 HTVAVVVVFLTSLLLLIGLVATLGLAIVSELQQFVSQAPDLLDSFVNLVDQIETLLKN-- 125 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ Q + LK + + G I L + I +++ FF Sbjct: 126 ---------ANIQVDLDFLQEDLKQEVSNLFSFGTAAVGKI-LSGLVEFIIILVVTFFML 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +G + S FP+ + ++ + F G I+++ G Y + Sbjct: 176 LNGEELWASFQSF----FPSNIEDLTLSLRNNFLGFFRGRLILSVFFGFSAFFVYLILQA 231 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + L + + +IPG +S +++ I + + ++ + I + L P Sbjct: 232 PYPLFLATLVGVFDLIPGVGATIGIILSAIIVLPKGILISLQVIVYCVLLQQIEENILMP 291 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ + L + FF L+ G R G LGLF+ + A+I +K+ Sbjct: 292 RIMQNSVNLNPVIIFFALLLGARIAGFLGLFLSIPIAAVIVGFVNIKNAGVKQ 344 >gi|37519773|ref|NP_923150.1| hypothetical protein glr0204 [Gloeobacter violaceus PCC 7421] gi|35210764|dbj|BAC88145.1| glr0204 [Gloeobacter violaceus PCC 7421] Length = 368 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 124/360 (34%), Gaps = 22/360 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + ++ W+++ + + + F + + A II F + + Sbjct: 1 MPMLTNLQRTLLTWLLLVAAGWAALQVLEYFREFISVFVIAGIIAFLLSYPVALLSKRL- 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 F AV+ S + + L + + Q +P + Sbjct: 60 --PRFAAVLVVYSSAGVVVGTLAVALGPLVSQQTA---------QLIASLPDIIRSGSLQ 108 Query: 117 MWASELWTKHLSHPQSLKILSETF---LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + A W ++L P + L F L+ + F + L+ I +++ Sbjct: 109 LEAFLKWARNLGLPVDVDRLVGGFGLRLQEQLQVITSPQSVEFLLGTFTGVLNFILILVI 168 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F+ +G + ++ + + + +R F G ++ + L+L Y Sbjct: 169 AFYMLLEGEKLWREAIGFLPANIRLRFSESLQYN---LRGFFTGQLVLGLFMALLLTPTY 225 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 VP + L + M +IP + + + + N++ A + + I D Sbjct: 226 LFLNVPFGLVLALFVGTMELIPFIGATLGIGLVVIICLTQNLWLALWVLAASVLIQQIKD 285 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P ++G L + F L+ G + GLLG+ + + +I +++ ++ + Sbjct: 286 NVLAPRILGNFTGLSPVLIFGALLIGAKIAGLLGVLLAIPISGVIKSLYETLAVSDPPPR 345 >gi|319784360|ref|YP_004143836.1| hypothetical protein Mesci_4677 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170248|gb|ADV13786.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 105/314 (33%), Gaps = 19/314 (6%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y P ++ +++ + P+ + S V+ ++ + + ++ + L Sbjct: 48 YVFSAILLPFVAGMVLAYFLDPVADRL-QRLGLSRFMATVVILITFLIVLVLAFVILIPV 106 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLKILSETFLK 142 +M + K+ P +L+ + + + + + L Sbjct: 107 LATQMADFAGKL----------PEYLTRLQSLITSFDPKWLEQKFGVNANSLRDGLNSLL 156 Query: 143 TNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T+G F+ + GM + + + F+ D + +D Sbjct: 157 TSGFGFVTTVFTSLWSSGMALVSVVSLFVVTPVVAFYMLLDWDRMVAVIDGWVPRDNVQT 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + I+R + G + + G + + L G+ + +G+ +++ IP Sbjct: 217 VRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFGILIGLFAGLISFIPYVGS 276 Query: 260 ISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ +++ + + + + I FI L+P LVG + L + F L Sbjct: 277 LTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMFSL 336 Query: 317 VGGVRTMGLLGLFI 330 G +GL I Sbjct: 337 FAFGALFGFVGLLI 350 >gi|121535964|ref|ZP_01667758.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] gi|121305456|gb|EAX46404.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] Length = 341 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 118/327 (36%), Gaps = 13/327 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ ++ P + A ++ + P + + + + + I+ L Sbjct: 23 FLWRVRSGLYPFILAFLLAYLLNPAVCYLENH-GLRRIWAIAVVYAVLFSIIILGGSRLV 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E++ G P ++ + A + ++ P SL+ + L Sbjct: 82 PLLIREIEAF----------GRDFPAIVARVEDLAQALQWQYQNSVLPYSLRQALDKTLL 131 Query: 143 TNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + G I L + + + I F+ D I ++L L + Sbjct: 132 LLQGEVQAFVSGLVGGIITLLSHFIGLAITPILAFYMLHDWHEIKERLLFLLPPYWRHEA 191 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I R V KV+ G +AI GL++ +L V + +G+I ++ +IP Sbjct: 192 VMIFRDVDKVLAGVIRGQITVAIIVGLLVSLGLYLLNVRYALMIGIIAGLLDVIPYFGAF 251 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++ L + + + A + + + + + P ++G + L L F L G Sbjct: 252 IGASPAVTLALLESPWLALKVGILFLVIHQLEGTVIGPKVLGENVGLHPLSVIFALFVGG 311 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIM 347 GL G+ +G + AL V + + Sbjct: 312 ELAGLAGMLLGVPVAALAKVFGRHLVR 338 >gi|225571246|ref|ZP_03780244.1| hypothetical protein CLOHYLEM_07335 [Clostridium hylemonae DSM 15053] gi|225160077|gb|EEG72696.1| hypothetical protein CLOHYLEM_07335 [Clostridium hylemonae DSM 15053] Length = 386 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 123/361 (34%), Gaps = 26/361 (7%) Query: 12 MRWMIMF--IILVSLY----------FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES- 58 +R +I+F I+++ L+ F+ P + I F + S Sbjct: 11 IRGLIIFTAIVVLCLWEYNKVFDILAFVFHILFPFILGGAIAFVLNVPMNFVERHLFGSD 70 Query: 59 --------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRW 109 S ++ + V+ L + + + + ++ + + + Q IP V Sbjct: 71 KVRKSKVLSKMARPVSMLIVLLLVFSVIGIVMFILIPQLGRTFANLGESIQAFIPRVQTR 130 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP----RFASRFGMIFLDYCL 165 +D+ W L + + + +G + A + + Sbjct: 131 AADLFHNNKEVMKWVNDLEFDWNKVMDAGIEFFRSGAGSVLDSTITAAKSIVSGIATFFI 190 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + +F L + + L + ++ + S G + A+ Sbjct: 191 AFVFACYVLLQKEKLNIQAKKVLFAFVRRGRAEAALEVFSLTYSTFSSFLTGQCVEAVIL 250 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G + + L +P + +G++ A A+IP AV +L+ + A Sbjct: 251 GGMFVVSMALFRLPYALLVGIVIAFTALIPIFGAFIGCAVGAFLIFMVDPVKALVFVALF 310 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + I + P +VG + LP + + G MG++G+ I +++++ +++E Sbjct: 311 LVLQQIEGNLIYPHVVGNSVGLPSIWVLAAVSIGGSLMGIVGMLIFIPVVSVVYALFREI 370 Query: 346 I 346 + Sbjct: 371 V 371 >gi|148997048|ref|ZP_01824702.1| hypothetical protein CGSSp11BS70_09810 [Streptococcus pneumoniae SP11-BS70] gi|168575531|ref|ZP_02721467.1| membrane protein [Streptococcus pneumoniae MLV-016] gi|307067471|ref|YP_003876437.1| putative permease [Streptococcus pneumoniae AP200] gi|147756748|gb|EDK63788.1| hypothetical protein CGSSp11BS70_09810 [Streptococcus pneumoniae SP11-BS70] gi|183578514|gb|EDT99042.1| membrane protein [Streptococcus pneumoniae MLV-016] gi|306409008|gb|ADM84435.1| Predicted permease [Streptococcus pneumoniae AP200] Length = 369 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 109/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGVFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 271 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 331 VGMIVAVPTYSILKEI 346 >gi|15894954|ref|NP_348303.1| permease [Clostridium acetobutylicum ATCC 824] gi|15024639|gb|AAK79643.1|AE007677_5 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509091|gb|ADZ20727.1| permease [Clostridium acetobutylicum EA 2018] Length = 341 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 105/319 (32%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L +L A +I +T P + + KK S+ A S+ I+ + FL Sbjct: 30 ILSEIIYIILVAFLIAYTVKPFHKCLV-KKGLSARKSAAFLLGSLTLFCILFMFFLVPSI 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E + + + + L GM S + Sbjct: 89 FKETLNINMTKNEIQYYIDFLNKKLKPTLQGMAGETFIVTIYSKFNNELRE--------- 139 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I F M + I + I ++F DG +I ++ + + KKI Sbjct: 140 ---IVSKLFNFVMSIGKNIVDIAIVPIISYYFLADGENIRNKILVIFPLSYRKLVKKIMC 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V V+ + I+ GL+ + V + L ++ + +IP PI Sbjct: 197 DVDNVLSKYNVTQIILCTFVGLLTFIILIVFKVDYPIILSIVNGLFNIIPYFGPIFGAIP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + + I I + P + G I + L L+ G + G Sbjct: 257 AIIIAFLHSTKVGIYTTVCLYIVQIIEGNLIAPKITGESIDMHPLIVIILLIAGEKIAGF 316 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + +I VI+++ Sbjct: 317 WGMILAIPVGVIIKVIYED 335 >gi|92109323|ref|YP_571611.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] gi|91802405|gb|ABE64779.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] Length = 801 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 108/331 (32%), Gaps = 12/331 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L LY+ + P+ A +I F P + ++ + V+V+C + Sbjct: 40 VLLTGLYYGRQILIPLAIAFLITFALNPPVTWL-ARLGLPRLLATSLVMVTVVCALVGLG 98 Query: 79 LFLFY---YGMLEM----KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L +E+ +++K+ Q+ + + + P Sbjct: 99 TILGTQVRSIAVELPAYQSTILTKLADLRQNLKAPGLFDGVLKIFERVQKEVELKDDRPA 158 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + A + + + + ++I +F D + + L Sbjct: 159 EGSPLPQRVEIVPEPQTPFEQAFAWLVRSAEPLATSGIILIFVFLALLDSADLRDRFLRL 218 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F I ++ R + ++ + G+ L + W+ GVP + G + AIM Sbjct: 219 LGGNFHRSTDAIQEAGARISRYLLMQ-LLVNVSYGVPLATGLWIIGVPGALLWGAVGAIM 277 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPF 309 +P P+ I L + + L+ I + I + P L G L Sbjct: 278 RFVPYIGPLIAAIFPIALAFAVDSGWSMLLWSVALIVMLELISSNIVEPLLYGSSTGLSA 337 Query: 310 LPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + G LGL + P+ + L+ Sbjct: 338 ISLIAAATLWTVLWGPLGLILSTPLTVCLLV 368 >gi|52426013|ref|YP_089150.1| PerM protein [Mannheimia succiniciproducens MBEL55E] gi|52308065|gb|AAU38565.1| PerM protein [Mannheimia succiniciproducens MBEL55E] Length = 355 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 120/350 (34%), Gaps = 17/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ + I+F V++YF AP+L AL++ + S K + ++ Sbjct: 15 DPQAMGLAAILFFGFVAIYFFSDLIAPLLIALVLAYLLEMPISFLSDKLKLPRFLSILLI 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I+ + L + + L S + +W+ +P + Sbjct: 75 LGGFIAVTILMIFGLIPTLINQTVNLFSDLPNMLNLS---HQWVMSLPESYPELVDYQMI 131 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S +++ + F ++ +F+ M + + + + +FF +D + Sbjct: 132 DSLFITIREKTLAFGESA-----VKFSLSSLMNLVTIGIYAFLVPLMVFFMVKDQDELIA 186 Query: 187 QLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L W+++ + IR + I+A+ V + G+ + Sbjct: 187 GFSRFLPKNRTLASKVWQEMQLQIANYIRGKLFEILIVAV----VSYIIFLFFGLRYPLL 242 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLV 301 L V + +IP GA + V++ + + + I ++D L P+L Sbjct: 243 LAVAVGLSVLIPYIGAVLVTIPVALVAIFQFGATPTFGYLMTAYIVSQLLDGNLLVPYLF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L L ++ G G+F L L+ + E Sbjct: 303 SEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSNEDE 352 >gi|257066949|ref|YP_003153205.1| hypothetical protein Apre_1463 [Anaerococcus prevotii DSM 20548] gi|256798829|gb|ACV29484.1| protein of unknown function UPF0118 [Anaerococcus prevotii DSM 20548] Length = 407 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 46/369 (12%), Positives = 124/369 (33%), Gaps = 25/369 (6%) Query: 15 MIMFIILVSLYFL----------KGFFAPVLSALIIGFTSWPIYSSFISKKEES------ 58 ++ +I +++ P++ L+I F + F K Sbjct: 19 FLLILIFFGFWYIDSVKGLLLTTYSVLRPIVYGLVIAFIINLPMNFFQEKLFCRFIDKDK 78 Query: 59 -STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWL--SDIP 114 ++V++ + +F + + + E+ ++ ++ + +L + Sbjct: 79 HRKLISVLSLLLAWIIFFAVVTLILTVLIPELANAITSLIDNIPVFFDRLIEYLNNQRLF 138 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + A + + +L FL F+ + S ++I+ I Sbjct: 139 KEVSAEISAKINSLNVDNLTSELRKFLDGKNWGFVSK-TSSILNSVSQTIITIVMGFIFS 197 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL----GMTIIAIGEGLVLG 230 F+ + ++ + + F K + K+ ++F + + GL+ Sbjct: 198 FYVSLNKKTLQTNTNKIILANFEEEKVKQINYIAKLSYNSFARFLETKLLSCLSLGLICF 257 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + +P + ++ +IP PI T V + L+ + + ++ Sbjct: 258 IGMLILRLPMPAMISILVGAFDIIPYFGPIIATGVGMILIFIQSPAQSLVFLIFVLAIQQ 317 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G LP + F + G G+ G+ + + +I + ++S Sbjct: 318 VQESIIYPLVIGKHQGLPAIWIFLSVFVGGGLFGIFGMLVSMPIATVIYTLVEDSTKRKL 377 Query: 351 ENKEKISSN 359 + KE + Sbjct: 378 KTKEISEED 386 >gi|71066178|ref|YP_264905.1| PerM family permease [Psychrobacter arcticus 273-4] gi|71039163|gb|AAZ19471.1| probable permease protein, PerM family [Psychrobacter arcticus 273-4] Length = 367 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 115/331 (34%), Gaps = 9/331 (2%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY + P + A ++ + P+ ++ ++ ++ L +L Sbjct: 26 LYLMMPVIVPFVFAFVLAYLFNPLVKRLSKYI--KRWIAIIVVYSTITLSMVMLLWWLIP 83 Query: 84 YGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ + + V W + + ++L ++ K Sbjct: 84 TLWHQLQAAWDYLPQLLTWYNEVVREWFAS---NSRIRLPELESKGFSETLVEYMQSNYK 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + M F++ I+ + I F+F + + + Sbjct: 141 FEDASTMMSQILASSMNFINNAGLIVLVPILTFYFLFNWDQRLHTWKMAIPAPYCKKVIQ 200 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 I++ + + + G ++ + G + L G+ + +G++ I + +P G I Sbjct: 201 IAQECDRALMAFIKGQLLVMVLLGAIYAVQLQLIGLELGLIIGMVAGIASFVPYLGFGIG 260 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGG 319 F A I L + + + GA + L+P L+G I L L F ++ G Sbjct: 261 FVAAIIACLFQFGLDWTYLSLIVGAFLIGQAAEGYILQPLLLGDKIGLSPLWVIFSVLAG 320 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +G +G+ I + A++ V+++ + + Sbjct: 321 ASLLGFVGMLIALPVSAVLNVLFRHFYVHYQ 351 >gi|157828826|ref|YP_001495068.1| hypothetical protein A1G_05375 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801307|gb|ABV76560.1| hypothetical protein A1G_05375 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 351 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 118/350 (33%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTVIFWLVFLGLFISGFMLISDAIKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILAILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K ++ Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSQ 345 >gi|310287916|ref|YP_003939174.1| hypothetical protein BBIF_1395 [Bifidobacterium bifidum S17] gi|309251852|gb|ADO53600.1| conserved hypothetical protein [Bifidobacterium bifidum S17] Length = 534 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 110/338 (32%), Gaps = 19/338 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVS 69 +I + ++ G + ++ ++I P+ S + + ++ + Sbjct: 35 TVIAVFAAIFVWTSWGKISTIVLDVVISIFIALAVEPLVVSMVRH-GWKRGLASAVSLIG 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L + ++ +V + + + + + Sbjct: 94 LAVIVMALLTLFGNMFVQQLISMVKGLPSIYTEIVDA------------VKQYTSFDMPK 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++L + ++T+ I A M + L+++ +++ ++ G + + L Sbjct: 142 IENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLLTVLMVTYYISAAGPKMRRSLC 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +V + I +I+A + VP + L + Sbjct: 202 QWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATCTAVFLEIIHVPYWLPLALFCG 261 Query: 250 IMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I++ +P G I ++ ++ + ++ + I + L P + + L Sbjct: 262 IVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFIIVYQQIENLILSPKVSQRTMDL 321 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F ++ G LG F+ + A + I+K Sbjct: 322 NPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVY 359 >gi|270292857|ref|ZP_06199068.1| membrane protein [Streptococcus sp. M143] gi|270278836|gb|EFA24682.1| membrane protein [Streptococcus sp. M143] Length = 371 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 104/312 (33%), Gaps = 8/312 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + PI + K + + +I +++ +V +++L + ++ Sbjct: 42 MIPFLLGGFFYYLTNPIVTFLEKKCKVNRLIGVLITLCALIGTIVVGVVYLLPILINQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF-LKTNGIDFI 149 L+ + L D+ + + ++ ++ + N ++ + Sbjct: 102 SLI-------VSSQNIYSRLQDLIYDLSMNPIFQNIDIQKTIQQLNLSYVDILQNILNSV 154 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 L +I + L +F DG L+ + + + + Sbjct: 155 SNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKFLPMLERTVLKHDKLNFSSLLKNLNA 214 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I G+ I A+ G + Y G+ + + + + +IP P I Sbjct: 215 TIARYISGIAIDAVIIGCLAYIGYSTIGLKYALVFAIFSGLANLIPYVGPSIGLIPMIIA 274 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + ++ I + L P +VGG +K+ + L+ G++G+ Sbjct: 275 NVFTDPHRVLIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLLSSNIYGVIGMI 334 Query: 330 IGPVLMALIAVI 341 + +++ I Sbjct: 335 VAVPTYSILKEI 346 >gi|15803016|ref|NP_289046.1| putative permease [Escherichia coli O157:H7 EDL933] gi|25307074|pir||G85892 probable permease perM [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12516881|gb|AAG57603.1|AE005479_1 putative permease [Escherichia coli O157:H7 str. EDL933] Length = 353 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ ++F G AP+L A+++ + WP S Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWP-TVRLQSIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + L + + + N+ P M A Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLV---------GLLTIAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGL-AXQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIIXSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|315179430|gb|ADT86344.1| permease PerM [Vibrio furnissii NCTC 11218] Length = 357 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 120/354 (33%), Gaps = 14/354 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+F +++YF AP+L A+++ + WP+ K Sbjct: 15 DPHAVSLVAILFFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVQLCRWKIPR-------- 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T +V+ + + + + + + + ++V + L + Sbjct: 67 -TFAVILVIVAFIGVMLFAVFGLVPTIWQQIVNLINDIPNMYTGLQKFIATLPDRYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L + + ++ + G + + I + +I + + +FF +D + Sbjct: 126 SLEIVEPIMNNAKNKALSMGESVVKGSLASLVSIAT-LAVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + I + G + + G V + + + V L Sbjct: 185 RIVRGVLPR-NRKLATEVWHEMNQQISNYIRGKVLEILIVGGVSYVTFAVLELRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA + V+I L + G L + I + L P L Sbjct: 244 VAVGFSVLIPYIGAAVVTVPVAIVALFQWGVTPEFYYLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L + ++ G G+F L L+ +WK +E + + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPPQTSA 357 >gi|239944747|ref|ZP_04696684.1| hypothetical protein SrosN15_27395 [Streptomyces roseosporus NRRL 15998] gi|239991212|ref|ZP_04711876.1| hypothetical protein SrosN1_28166 [Streptomyces roseosporus NRRL 11379] gi|291448209|ref|ZP_06587599.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351156|gb|EFE78060.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 388 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 111/352 (31%), Gaps = 22/352 (6%) Query: 13 RWMIMFIILVSLYFLK--------GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 R M++ + L + + L G VL A + P S+ Sbjct: 7 RAMVLALALYACFQLSSWAFDQLIGLLTNVLIAFFLALAIEPAVGRMASR-GIRRGLATF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + ++ L ++ ++V + I W++ + Sbjct: 66 LVFLGLTIFGVGFVVLLGSMLAGQIVDMVDEFPKYIDSVI---NWVNQTFHTELSRVEVQ 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L H L + +++ + + + G +F + + F+F DG + Sbjct: 123 DSLLHSDWL----QKYVQNSATGVLDVSTTVIGGLFRLLTIFLF-----SFYFAADGPRL 173 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L S+ + I ++A+ G+ + GVP AL Sbjct: 174 RRALCSVLPPARQTEVLRAWEIAVDKTGGYIYSRGLMALISGVAHYILLVILGVPYAPAL 233 Query: 245 GVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +++ IP A+ + + + + A + + I + L+P L Sbjct: 234 AVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVIYQQFENYVLQPKLTAK 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + F ++ G +G +G + +A + + + Sbjct: 294 TVDIHPAVAFGSVIAGTALLGAVGALVAIPAIATLQAFLGAYVKRYDVTDDP 345 >gi|251782288|ref|YP_002996590.1| hypothetical protein SDEG_0877 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390917|dbj|BAH81376.1| hypothetical protein SDEG_0877 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127187|gb|ADX24484.1| hypothetical protein SDE12394_04950 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 375 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 108/285 (37%), Gaps = 8/285 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + +L++ + + P + + + Sbjct: 80 ICMLLAYLTFFILITWIISIVI---PDLIASISTLTKFDTPSIKEVVNQLEHNKLLARVI 136 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 K++ L ++ + FI + + + +++ + + + Sbjct: 137 KYIGGDAKLTQTITSYSQQLLKQFIGVLTNILTSVTVIASAIINLFISFVFSLYVLANKE 196 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ +Q ++L + Y ++I ++ F+ T+ A+ G + + +L +P Sbjct: 197 SLCRQGNTLVDTYTGKYAQRIHYLVDLLHHRFHGFFVSQTLEAMILGTLTTTGMFLLQLP 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 257 FAGTIGVLVAFTALIPVVGASIGAAIGFVLIMTQSMSQAIVFIVFLIILQQIEGNFIYPR 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +VGG I LP + + G G++G+ I L A + + K+ Sbjct: 317 VVGGSIGLPAMWVLMAITIGASLRGIVGMIIAVPLAATLYQVIKD 361 >gi|210615412|ref|ZP_03290539.1| hypothetical protein CLONEX_02755 [Clostridium nexile DSM 1787] gi|210150261|gb|EEA81270.1| hypothetical protein CLONEX_02755 [Clostridium nexile DSM 1787] Length = 372 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 111/330 (33%), Gaps = 5/330 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I++ + L FF P + I F + P+ + + + I ++V+ + Sbjct: 22 ILFIVIGIKLLW-FFMPFVIGWFIAFIANPLVCWLEKRLKIVKKLGSAIIIIAVLAGVVS 80 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLK 134 L F E+ L++ + + + G+ E + + Sbjct: 81 ALYFGISKLADEVGSLITNFPQMYSELEKGMKDIGESFQGVFRLLPEGIQTGWNAVVANL 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L + A +S I I+A +FF + + + Sbjct: 141 DNTMGNLIGKISEPTVEAAGNLAKSIPSILVSTIVTIVAAYFFIAERDEVIVWFKKITPK 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + F I I G++L + + V L ++ A + + Sbjct: 201 PIQQRMTLVIDNLKYAVGGYFKAQFKIMIVVGVILFIGFEIMQVNYSALLAILIAFLDFL 260 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G + ++Y ++ G+ L + + +V + ++P LVG + + L Sbjct: 261 PVFGTGTAIWPWAVYKVLSGDYKMTIMLLVLYGVTQ-LVRQLIQPKLVGDGLGMQPLVAL 319 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L G + LLG+ + + ++K Sbjct: 320 VLLFVGYKVGSLLGMIFAVPVGMIAINMYK 349 >gi|150009942|ref|YP_001304685.1| putative permease [Parabacteroides distasonis ATCC 8503] gi|255012811|ref|ZP_05284937.1| putative permease [Bacteroides sp. 2_1_7] gi|149938366|gb|ABR45063.1| putative permease [Parabacteroides distasonis ATCC 8503] Length = 415 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 132/360 (36%), Gaps = 23/360 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+ + L+ P L A ++ + P F K S L+++A + Sbjct: 46 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 105 Query: 69 SVMCLFIVPLLFLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I L+ + E + + + + VP W ++L Sbjct: 106 VTLGLLITLLIVMVVPSIAAEADKTLELIRTHDPGEGHVP----------LIPHSWMEYL 155 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-----YCLSIIFMIIALF-FFYRDG 181 + + E K N + + + A + I + + ++I+F+I+ F F D Sbjct: 156 ESNVNFAQIMELLSKENLLKAVKQIAPQLWSILSNTFSILFSITIVFVILLYFIFILLDY 215 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ L + + + ++ V + F G ++IA+ G++L + + P Sbjct: 216 EKIANGWIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGILLAIGFKIINFPLA 275 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKT 295 V LG+ ++ +IP I + + L+ G F L I I D Sbjct: 276 VTLGLFIGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGLAILVLGIVQCIQDLY 335 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G + L L +G +GL I L L +K I+ + Sbjct: 336 LTPRIMGKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEYNELDS 395 >gi|309806960|ref|ZP_07700942.1| putative membrane protein [Lactobacillus iners LactinV 03V1-b] gi|308166580|gb|EFO68777.1| putative membrane protein [Lactobacillus iners LactinV 03V1-b] Length = 334 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 115/329 (34%), Gaps = 4/329 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L F+ V+ A + + PI K + + V+ + I+ + L Sbjct: 5 LTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILILIVNTLLP 64 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + K L+ G R L P +S+ QS+ + Sbjct: 65 VIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILFNT----GK 120 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + ++++ LFF +D I+ L S + K+ Sbjct: 121 ASFNLFLENLFGAVNVISMLIVTLLTAPFILFFMLKDSKKINPYLTSFMPPRLQNVFSKL 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + S G I+A G++ Y G+ + L ++ A + +IP + Sbjct: 181 LHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIPYFGTLISL 240 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + I + +F+ IE I + + P ++G +K+ + T L+G Sbjct: 241 IPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILLLIGANSVA 300 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GLLG+ + A I +I + ++N Sbjct: 301 GLLGVIFAIPIYAGIKIIVVQVFDYYRKN 329 >gi|284053786|ref|ZP_06383996.1| hypothetical protein AplaP_20212 [Arthrospira platensis str. Paraca] Length = 351 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 118/353 (33%), Gaps = 22/353 (6%) Query: 3 ETMLNPQGIMRWMIMFII-LVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEES 58 E + ++R++++F + F+ F + A I F Sbjct: 10 ENFFSNSRLVRYLLLFAFGWAFIQFIAYFETIIIVFVFAAIFAFLLNYPVQWLQKY---- 65 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 T + + +V L L ++ V Q P L + Sbjct: 66 --------TSHTVAVVVVFSTSLLLLIGLLATLGLAIVSELQQFVSQAPDLLDSFVNLVD 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E K+ + L L E + F F + L + I +++ FF Sbjct: 118 QIETLLKNANIQVDLDFLQEDLKQEVSNLF--GFGTAAVGKILSGLVEFIIILVVTFFML 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +G + S FP+ + + + F G I+++ G Y + Sbjct: 176 LNGEELWASFQSF----FPSNIEDFTLSLRNNFLGFFRGRLILSVFFGFSAFFVYLILQA 231 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + L + + +IPG +S +++ I + + ++ + I + L P Sbjct: 232 PYPLFLATLVGVFDLIPGVGATIGIILSAIIVLPKGILISLQVIVYCVLLQQIEENILMP 291 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ + L + FF L+ G R G LGLF+ + A+I +K+ Sbjct: 292 RIMQNSVNLNPVVIFFALLLGARIAGFLGLFLSIPIAAVIVGFVNIKNAEVKQ 344 >gi|297617177|ref|YP_003702336.1| sporulation integral membrane protein YtvI [Syntrophothermus lipocalidus DSM 12680] gi|297145014|gb|ADI01771.1| sporulation integral membrane protein YtvI [Syntrophothermus lipocalidus DSM 12680] Length = 373 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 127/358 (35%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY-------------- 48 + + + +++ ++F+ L+S+Y L + P++ A+++ + + Sbjct: 4 QLARSVRTLVKTAVVFLALLSVYLLFRYVLPLVGAILVAIPGYVLPFLVALLLALLIEPL 63 Query: 49 -SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + ++ + V L + + E+ L + +H + + Sbjct: 64 ARFLNYRLRLRRGWAVFLSLLLVWGTAGFLLTYFVSRLIGELIGLYKVI---TEHSVSIT 120 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS---RFGMIFLDYC 164 ++ G L + Q S + + F + Sbjct: 121 NTIARALGQAELFYLRLNLPDNVQESIRNSLLQYLSGLEKILSGSVDVLIDFLVGLPGLF 180 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + + +A FF RD + L + + + + + +++ Sbjct: 181 VFFLISTVATFFILRDWNKLRSGFFELLPDSWKITVRTVIKDLFNAFTGFLKAYSLLVTV 240 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ L GV + LG++T ++ ++P G + F I+ I G AT L + Sbjct: 241 TGIETIVGLKLLGVEYALTLGLVTGLLDILPVLGPGVLFVPWIIFSYITGASGFATGLLI 300 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I + V + L P LVG I L L T L G++ +G GL +GPV++ L Sbjct: 301 LYGILVA-VRQVLEPKLVGDSIGLHPLATLVSLYIGLKLLGPAGLVLGPVMVILYLAC 357 >gi|328957089|ref|YP_004374475.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] gi|328673413|gb|AEB29459.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] Length = 364 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 112/317 (35%), Gaps = 9/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A + + P+ K + ++ +F++ L F+ + Sbjct: 39 FVSTLFTPLIVAGFLYYLLNPVIGQLEKIKIKRKY--------GIIIVFLLFLGFVAFLA 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTN 144 + + L+ +V + L D + + L LS + Sbjct: 91 VSVIPNLIEQVGQLITSIPSFLKTLEDFSNELLQGPMLENFDLEKSLGTMDLSIENIANT 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + I + I LF+ ++DG + + ++ Sbjct: 151 IFTTLTASVGTLVGALANTTIVIFTVPIILFYMFKDGKHFRPAVAKFFPKEYRGQMIELL 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + I S G ++ + + Y + G+P + LG+I + +IP P A Sbjct: 211 GQMNETIASYISGQALVCLFVAIFTYLGYLITGMPYGLLLGIIAGVTNIIPYIGPYIGAA 270 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++++ + + A + L + I + P ++G + + L L+ G Sbjct: 271 PAVFIALTISPTQALLVALVVLVVQQIDSAFISPNVIGKTLSIHPLTIIVLLLVAGNIAG 330 Query: 325 LLGLFIGPVLMALIAVI 341 +LG+ +G A++ I Sbjct: 331 ILGMILGVPTYAVVKTI 347 >gi|251793815|ref|YP_003008547.1| PerM [Aggregatibacter aphrophilus NJ8700] gi|247535214|gb|ACS98460.1| PerM [Aggregatibacter aphrophilus NJ8700] Length = 352 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 112/342 (32%), Gaps = 13/342 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + I+ +++YF AP+L A+++ + WP+ +++K + LA Sbjct: 15 DPQAMGLAAILLFGFIAIYFFSDLIAPLLVAIVLAYLLEWPV--RLLNEKLKCPRLLA-- 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + L + ++V+ + WL +P Sbjct: 71 TTLVIGTFTGLVFLVVLVLLPNLWTQMVNLLSDLPHMFNKFNEWLLSLPE---RYPDLID 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + E L AS M + + + + +FF +D + Sbjct: 128 TKTVESIFGSVKEKILGLGESALKLSLASL--MNLVTLGIYAFLVPLMVFFLLKDKRQLM 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + I + G + V + + G+ + L Sbjct: 186 DGVSRFLPR-NRTLASAVWVEMQQQISNYIQGKLVEIFVVAAVTYMIFLIFGLNYPLLLA 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V I ++P GA + V + + + G+ + + + + L PFL Sbjct: 245 VAVGISVLVPYIGAVLVAIPVVLVAIFQFGDTHTFWYIVIAFVVSQLLDGNLLVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L L ++ G G+F L L+ + Sbjct: 305 AVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 346 >gi|169335805|ref|ZP_02862998.1| hypothetical protein ANASTE_02231 [Anaerofustis stercorihominis DSM 17244] gi|169258543|gb|EDS72509.1| hypothetical protein ANASTE_02231 [Anaerofustis stercorihominis DSM 17244] Length = 406 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 124/343 (36%), Gaps = 19/343 (5%) Query: 31 FAPVLSALIIGFTSW----PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 PVL II F + +Y+ + V+++V+VM + I+ + + Y + Sbjct: 60 LKPVLIGFIIAFFLYQPVDNLYNRINKHSKFKDGTNRVLSSVAVMIIAILIITLIVYIVL 119 Query: 87 LE-MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + S + + + +++D+ + + ++ T + N Sbjct: 120 PSTITSITSLITSIQDNMGSIESFVTDLTKHPMVVNILNFFNIDITTSSGVNATLV--NM 177 Query: 146 IDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + F + G ++ +S+ I + D ++ +Q+ + E +F Sbjct: 178 LSFAKTWVEGIGTNLVNATMSVGKTVYNVFIAIFLALYMLIDKDTLLRQVSRVSEAVFSE 237 Query: 199 YW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ + G I ++ G + + ++ + + I I MI Sbjct: 238 RIYGRVSYVLDLMNYMFFKFLSGKAICSLIVGAMGMALAYIFKIKYASLIAFIITITNMI 297 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G S SI+ +I G + L I L P ++G + L Sbjct: 298 PLFGPIFSVIPCSIFAMISGGPIQGIIMVLIIIFIQQIDQNVLAPKILGDVVGLNGFWVI 357 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++ G++G+ IG + A++ ++ + +M K+ + Sbjct: 358 VSIIFCGSLFGVVGMVIGIPIFAVLKILMGQWLMDRKDENKPP 400 >gi|114562932|ref|YP_750445.1| hypothetical protein Sfri_1757 [Shewanella frigidimarina NCIMB 400] gi|114334225|gb|ABI71607.1| protein of unknown function UPF0118 [Shewanella frigidimarina NCIMB 400] Length = 360 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 108/317 (34%), Gaps = 12/317 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ +S+ S T A I V + L I+ L + LV+ + G+ Sbjct: 54 WPVAQ--MSRLGISRTAAATIVLVVFLGLMIILTFGLVPSIWRQGVSLVTDLPSMIDKGM 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + R S A S S+ L T + + + + L Sbjct: 112 IIVREFS-------ADYPQFVSASQLDSMMEEINKMLDTQHLIDLGKQILGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKEFLLNGSKRFFPSNRGL-ARKVWFEMDQQIFNYIRGKVIEIVI 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + + G+ LGV+T + +IP GA + +++ + + Sbjct: 224 IGVASYIFFAIMGLRYSALLGVLTGLSVLIPYVGATLVTLPIALVAFFQWGFSAEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNVLVPLLFSDAVDLHPVVIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KESIMAIKENKEKISSN 359 ++ + K S Sbjct: 344 NAWPNNQEQQRVKFDSE 360 >gi|262377526|ref|ZP_06070748.1| phytochrome sensor protein [Acinetobacter lwoffii SH145] gi|262307582|gb|EEY88723.1| phytochrome sensor protein [Acinetobacter lwoffii SH145] Length = 509 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 124/349 (35%), Gaps = 31/349 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++I +++ +LYF + F P+ A+++ F P+ S K+ + A+ + + Sbjct: 18 MAGFVIAAVVMTALYFGRDIFIPLALAILLAFLLSPLVSRL--KRWGCPQWAAIGLVMCL 75 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 F L Y +++ +L ++ Q+ + + L + +W + Sbjct: 76 TLSF---LGGTATYLGVQLGKLSQELP---QYQDTIQQKLKMLENYRQGPSMWDGAIQTF 129 Query: 131 QSLKILSETF----------------LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 +++ +T L+ + + ++ + +FM++ L Sbjct: 130 DTVEDSIDTPEQETEDPNVQNVKVVGLEPTSEEAALDWLNKILNPLAIIGIVFLFMVLIL 189 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F +G + + L + K I + ++ + G+ + Sbjct: 190 F----NGKDLHDRFLKLLGGNLNIGTDALDD-AGKSIGTYLRMQLLVNVTYGIPMAIGLL 244 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIV 292 L GVP+ + G++ +M +P PI I L + L+ I + I Sbjct: 245 LIGVPAAIMWGLVAVVMRFVPYVGPIVSAIFPITLAFAVDPGWDMVLWTVALILVLELIS 304 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P+L G L L G +GL + L A + V+ Sbjct: 305 NNVIEPWLYGESTGLSTLAIILAATFWTTLWGPVGLILSTPLTACLLVL 353 >gi|94967597|ref|YP_589645.1| hypothetical protein Acid345_0566 [Candidatus Koribacter versatilis Ellin345] gi|94549647|gb|ABF39571.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 394 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 114/304 (37%), Gaps = 15/304 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ S S +I V + + + E ++L G Sbjct: 82 PVVSRLAGWMRNSRGLAILIVYVLLFVAVTIAGALIGPRIFSEGQKL----------GQQ 131 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF--ASRFGMIFLDY 163 +P + G A L ++H +T L ++ + + A L Sbjct: 132 LPDLYDKVASGNIAFTLGSRH-GWSAETSQRLKTLLVSHQDEIVSAISSAGTRTAAMLTN 190 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSL-GEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 II + I F +D + L ++ GE ++ ++ V ++ ++A Sbjct: 191 IGWIIIIPILGAFLLKDKRDLRLSLQNIVGEPRKREFFGQLITDVDAMLSQFVRAQLLLA 250 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL 281 I GLV +A + VP LG + ++ +P G I+ + N + + Sbjct: 251 IISGLVYTAALSVLQVPYAYILGAVGGLLEFVPLVGPAIAAVGIVGVCFGTPNFHHTLWV 310 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + + D + P L+GG ++L L T FG++ G G+LG+++ +MA I ++ Sbjct: 311 VVFLGVWRLLQDYVISPRLLGGKVELHPLLTIFGVLAGGEVAGVLGIYLSVPVMATIRIL 370 Query: 342 WKES 345 + Sbjct: 371 FIHW 374 >gi|148655693|ref|YP_001275898.1| hypothetical protein RoseRS_1556 [Roseiflexus sp. RS-1] gi|148567803|gb|ABQ89948.1| protein of unknown function UPF0118 [Roseiflexus sp. RS-1] Length = 407 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 115/357 (32%), Gaps = 20/357 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I + + + + ++G P ++A I + P+ + + + Sbjct: 13 TIKLITVALLGALFFWLIRGLGNVLVPFVAAAITAYLFNPLITWLNRRTRIGRAIWIGVL 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + L E L +++ L + E+ + Sbjct: 73 YIVIGIIIYGLWRTLGPAIEREYSGLQAQIPHTLNLVQQELLLLKHVSIAGIDIEVAPVN 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + ++L +P I + L + +I F+ + I + Sbjct: 133 EALREALADFGRR---------LPEHVPHLVAIAFETLLLFVTYLIVTFYLLLEAPRIVE 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + A + + + +++ G ++ + A + GV + LG+ Sbjct: 184 WTYGLVPAPYRAEIRALGSQIDRILAGYVRGTLMLIPIMATLTTIALMILGVRYALVLGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRP 298 +T I+ IP P S ++I + + A + L + D + P Sbjct: 244 VTGILETIPLIGPWSAAGIAIIVALFQAPAPWGWPAWLIAGAIGLTYFVLRMFEDNFIIP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VG + L + F ++ G G GLF+ + A+ ++ + + + + Sbjct: 304 HVVGPAVHLHPMLVIFAILAGGALGGPFGLFVSIPVAAIARLLLRYLYYKLIDAPDP 360 >gi|92119311|ref|YP_579040.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] gi|91802205|gb|ABE64580.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] Length = 782 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 116/337 (34%), Gaps = 25/337 (7%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L LY+ + P+ A +I F P + ++AT VM + L Sbjct: 40 VLLGGLYYGRQILIPLAIAFLITFALNPPVTWLARLGLPR-----LLATSLVMVTVVCTL 94 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L +++ + ++ V L+D+ + A L+ + L + ++ E Sbjct: 95 VGLGTILGTQVRSIAVELPAYQST---VLTKLADLRQNLKAPGLFDRVLKIFERVQKEVE 151 Query: 139 TFLKTNGIDFIPR-------------FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +P+ A + M + + ++I +F D + Sbjct: 152 LKDNRPAEGSLPQRVEIVPEPQTPFEQAFAWLMRSAEPLATSGIILIFVFLALLDFADLR 211 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L F I ++ R + ++ I G++L + W+ VP + G Sbjct: 212 DRFLRLLGGNFHRSTDAIQEAGARISRYLLMQ-LLVNISYGVLLATGLWIIAVPGALLWG 270 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGG 303 + AIM +P P+ I L + + L+ I + I + P L G Sbjct: 271 AVGAIMRFVPYIGPLIAAIFPITLAFAVDSGWSMLLWSVALIVMLELISSNIVEPLLYGS 330 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 L + G LGL + P+ + L+ Sbjct: 331 STGLSAISLIAAATLWTVLWGPLGLILSTPLTVCLLV 367 >gi|15902821|ref|NP_358371.1| hypothetical protein spr0777 [Streptococcus pneumoniae R6] gi|116516125|ref|YP_816255.1| hypothetical protein SPD_0768 [Streptococcus pneumoniae D39] gi|148988292|ref|ZP_01819739.1| hypothetical protein CGSSp6BS73_05680 [Streptococcus pneumoniae SP6-BS73] gi|148993687|ref|ZP_01823134.1| hypothetical protein CGSSp9BS68_05315 [Streptococcus pneumoniae SP9-BS68] gi|149007182|ref|ZP_01830846.1| hypothetical protein CGSSp18BS74_05016 [Streptococcus pneumoniae SP18-BS74] gi|149010494|ref|ZP_01831865.1| hypothetical protein CGSSp19BS75_04047 [Streptococcus pneumoniae SP19-BS75] gi|182683788|ref|YP_001835535.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|194398662|ref|YP_002037509.1| hypothetical protein SPG_0796 [Streptococcus pneumoniae G54] gi|237650528|ref|ZP_04524780.1| hypothetical protein SpneC1_07370 [Streptococcus pneumoniae CCRI 1974] gi|237822667|ref|ZP_04598512.1| hypothetical protein SpneC19_10283 [Streptococcus pneumoniae CCRI 1974M2] gi|298231088|ref|ZP_06964769.1| hypothetical protein SpneCMD_10508 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255725|ref|ZP_06979311.1| hypothetical protein SpneCM_09065 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503121|ref|YP_003725061.1| permease [Streptococcus pneumoniae TCH8431/19A] gi|303255290|ref|ZP_07341361.1| hypothetical protein CGSSpBS455_07411 [Streptococcus pneumoniae BS455] gi|303260393|ref|ZP_07346362.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|303262750|ref|ZP_07348688.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|303265039|ref|ZP_07350953.1| membrane protein [Streptococcus pneumoniae BS397] gi|303267131|ref|ZP_07353000.1| membrane protein [Streptococcus pneumoniae BS457] gi|303269373|ref|ZP_07355144.1| membrane protein [Streptococcus pneumoniae BS458] gi|15458373|gb|AAK99581.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076701|gb|ABJ54421.1| membrane protein, putative [Streptococcus pneumoniae D39] gi|147761220|gb|EDK68187.1| hypothetical protein CGSSp18BS74_05016 [Streptococcus pneumoniae SP18-BS74] gi|147764975|gb|EDK71904.1| hypothetical protein CGSSp19BS75_04047 [Streptococcus pneumoniae SP19-BS75] gi|147925973|gb|EDK77047.1| hypothetical protein CGSSp6BS73_05680 [Streptococcus pneumoniae SP6-BS73] gi|147927767|gb|EDK78790.1| hypothetical protein CGSSp9BS68_05315 [Streptococcus pneumoniae SP9-BS68] gi|182629122|gb|ACB90070.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|194358329|gb|ACF56777.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|298238716|gb|ADI69847.1| possible permease [Streptococcus pneumoniae TCH8431/19A] gi|302597759|gb|EFL64834.1| hypothetical protein CGSSpBS455_07411 [Streptococcus pneumoniae BS455] gi|302636072|gb|EFL66569.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|302638428|gb|EFL68894.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|302641091|gb|EFL71467.1| membrane protein [Streptococcus pneumoniae BS458] gi|302643339|gb|EFL73617.1| membrane protein [Streptococcus pneumoniae BS457] gi|302645399|gb|EFL75632.1| membrane protein [Streptococcus pneumoniae BS397] Length = 369 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 108/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 271 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 331 VGMIVAVPTYSILKEI 346 >gi|148262888|ref|YP_001229594.1| hypothetical protein Gura_0813 [Geobacter uraniireducens Rf4] gi|146396388|gb|ABQ25021.1| hypothetical protein Gura_0813 [Geobacter uraniireducens Rf4] Length = 173 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 1/103 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I + S + L F ++ A +I T+WP+ + TV ++ + Sbjct: 18 LFIGILTAASFWILHPFLTALVWATMIVVTTWPVMLRIQKRLRGKRALAVTAMTVGLLLV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPG 115 F +P + E+V+ + P P W+ +P Sbjct: 78 FSIPFTLAVINIIDWSDEIVTWSKSLATFTVSPPPAWVEQLPV 120 >gi|27365255|ref|NP_760783.1| putative permease PerM [Vibrio vulnificus CMCP6] gi|27361402|gb|AAO10310.1| Putative permease PerM (= YfgO) [Vibrio vulnificus CMCP6] Length = 356 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 123/352 (34%), Gaps = 14/352 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ V++YF AP+L A+++ + WP+ + + T + Sbjct: 15 DPHAVSLVAILLFGFVTIYFFGHLLAPLLVAIVLAYLLEWPVAQ--LRRFGVPRTVGVIA 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ L L ++ L++ V + ++++ +P Sbjct: 73 VILLFIGLMLIALFGLIPTIWTQVGNLINDVPNMYNG---LQQFIASLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ + G + + + + +I + + +FF +D + Sbjct: 126 NLQIVEAIVTNAKNKVLGMGESVVKGSLASL-ISIATLAVYLILVPLLVFFLLKDKEEMM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L K+ + + I + G + + G V + + + L Sbjct: 185 RMASGLLPK-NRNLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGISTEFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ +WK + + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSQDEHEAQP 355 >gi|108802917|ref|YP_642854.1| hypothetical protein Rxyl_0061 [Rubrobacter xylanophilus DSM 9941] gi|108764160|gb|ABG03042.1| protein of unknown function UPF0118 [Rubrobacter xylanophilus DSM 9941] Length = 383 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 101/281 (35%), Gaps = 1/281 (0%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V+V+ LF + L L + L +++L + V + + + + +L Sbjct: 87 LAILVTVLGLFGLVALALLFLIPLLIEQLTNFVRITPAIAASATEFFGSLDDLLNRRDLP 146 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + ++ + R F + + ++ ++ + D Sbjct: 147 LQLPESFVSDLVRDLFDRAQQILEGMIRNLIGFISGAFSFAVGVLGVLFVAIYLLIDVRK 206 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + H + +++ + G+ + +G + +A W+ GVP + Sbjct: 207 VKAAYLRMVPHRYRWDARELWDAFGVSLSRYLGGLLFVVAVQGALSAAALWVLGVPYPIL 266 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG ++ A++P G + I LI A + L P + G Sbjct: 267 LGAWVSVTAIVPYLGPFLGAIPAIIVALIFTTPTTAVLTVIAYIAIQQFEGNFLTPRIQG 326 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +++ + ++GG + G++G+ ++A++ V Sbjct: 327 RALQVHPIIVLLAVIGGGQIAGIVGILFAVPVLAILRVFVD 367 >gi|283832132|ref|ZP_06351873.1| permease, PerM family [Citrobacter youngae ATCC 29220] gi|291071762|gb|EFE09871.1| permease, PerM family [Citrobacter youngae ATCC 29220] Length = 354 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 121/351 (34%), Gaps = 22/351 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPI----YSSFISKKE 56 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLIILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTVRLEHIGCSRRWA 69 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S + + + +M ++P+ + G+ ++++ + + +PR + Sbjct: 70 TSIVLVVFVGILLLMAFVVMPVAW--QQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDA 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + S ++ D + +++ + L + ++ + + +FF Sbjct: 128 GIIDAMAENMRSRMLTM------------GDSVVKYSLASLVGLLTLAVYLVLVPLMVFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D + + + ++ + + + I + G + + G+ + L Sbjct: 176 LIKDKGQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMVVVGVATWLGFLLF 234 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+ + L V+ +IP GA + V + L G F I + Sbjct: 235 GLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGN 294 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P L + L L +V G G+F L LI + Sbjct: 295 LLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVMHAW 345 >gi|302522271|ref|ZP_07274613.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302431166|gb|EFL02982.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 444 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 113/347 (32%), Gaps = 21/347 (6%) Query: 17 MFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ L G VL A + P S ++ + + Sbjct: 12 ALLLIACFQLGTWAFHRLTGLLINVLIAFFLALAIEPAVSWMSAR-GMRRGAATGLVFLG 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + L +++ +V ++ V +W++ G + +EL + Sbjct: 71 VLIFAAGFVTLLGSMLAGQIQNMVEDFP---KYLDSVIKWVN----GTFHTELSRLEVQD 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + +++ + + A G +F L + F+F DG + + L Sbjct: 124 SVLHSDWLQRYVRNSASGVLDVSAQVLGGLFQLLTLL-----LFAFYFAADGPRLRRALC 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ A + I ++A+ G+ + G+P ALGV Sbjct: 179 SVLPPAKQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYILFQALGIPYAPALGVWVG 238 Query: 250 IMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++ IP A+ + + + + A + ++ I + L+P L + + Sbjct: 239 LVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLVFVVIYQQFENYLLQPKLTARTVDIH 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++ G +G +G + +A + + + Sbjct: 299 PAVAFGSVIAGTALLGAVGALVSIPAVATLQAFLAAYVKRYDVTDDP 345 >gi|255693730|ref|ZP_05417405.1| putative membrane protein [Bacteroides finegoldii DSM 17565] gi|260620481|gb|EEX43352.1| putative membrane protein [Bacteroides finegoldii DSM 17565] Length = 377 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 122/334 (36%), Gaps = 16/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S L++ + ++ V + +L Sbjct: 31 LSGVLLPFFIAWLIAYMIYPLVKLFQYKLRLKSRILSIFCALFLISAIGVTVFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ +ILSE + Sbjct: 87 --VPPMISEMSRMNDLLVTYLTNGAGNNVPKNLSEFIHEYVDLQALNRILSEENILAAIK 144 Query: 147 DFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D +I++ L + + + + Sbjct: 145 DTVPRLWTLLAESLNILFSIFTSFIILLYVVFILL-DYEAIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VRDVQDGMNKYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFF 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F A+ I D L P ++G L L Sbjct: 264 PTVLLAILKAADTGENFWIIIACALAVFAVVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|25011220|ref|NP_735615.1| hypothetical protein gbs1169 [Streptococcus agalactiae NEM316] gi|76797902|ref|ZP_00780164.1| EpsX [Streptococcus agalactiae 18RS21] gi|77410564|ref|ZP_00786925.1| membrane protein, putative [Streptococcus agalactiae CJB111] gi|23095644|emb|CAD46828.1| Unknown [Streptococcus agalactiae NEM316] gi|76586739|gb|EAO63235.1| EpsX [Streptococcus agalactiae 18RS21] gi|77163512|gb|EAO74462.1| membrane protein, putative [Streptococcus agalactiae CJB111] Length = 377 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 126/344 (36%), Gaps = 19/344 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI----ATVSVMCLFIVPLLFLF 82 + F A II +Y K + S L I + + FI +++LF Sbjct: 39 IFPFLMGAGIAYIINIVMS-VYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLF 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ---SLKILSET 139 + ++ +S +++ + + + ++++ SE + +L S+ Sbjct: 98 SIVIPDLISSLSSLLVIDTGALA--KLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQ 155 Query: 140 FLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK + S L+ +S IF I L + + +Q + L + Sbjct: 156 ILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVL----ANKEQLGRQFNLLIDTYLG 211 Query: 198 AYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I+ + F+ T+ A+ G + + P + +GV+ A A+I Sbjct: 212 STGKTFHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALI 271 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + L+ ++ A L+ + + P +VGG I LP + Sbjct: 272 PVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLT 331 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+ + + A I I K+ I+ + + + + Sbjct: 332 AITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRART 375 >gi|326693108|ref|ZP_08230113.1| permease [Leuconostoc argentinum KCTC 3773] Length = 367 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 110/323 (34%), Gaps = 16/323 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS----TFLAVIATVSVMCLFIVPLLFL 81 F+ FAP++ A + + P+ S K VI + + + + L+ L Sbjct: 40 FISTVFAPLVVAGFLYYILKPLVSLIQKIKIRGKVIPHQLAVVITFLGFLAMIVGALVVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ LV+ + I + SE + H +T + Sbjct: 100 VPTLIQEITNLVNALPSFLNDA-------QRIATEVVKSEWFDAL--HFSVEVEQVKTAV 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYC---LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 F+ A G + ++++ + + LF+ DG + + L Sbjct: 151 GKYAGSFLTVTAGTLGTVTSTVTTVTINLVTIPVILFYMLSDGNRLVPAIQKLFPARHAE 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ + I G I G + Y L G P LG+I I ++P Sbjct: 211 TISELTTKMDTTIEKYISGQAIEMGFVGASMAIGYLLIGQPYAWLLGIIAGITNIVPYLG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + + I + + P ++G + + L L+ Sbjct: 271 PWIGVVPALIIASTQSWKQVVLVLIVMTIVQQLDGNFIYPNVIGKSLAIYPLTIMILLMV 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + + A++ V+ Sbjct: 331 AGNLWGIVGMILIVPVYAILRVV 353 >gi|256369147|ref|YP_003106655.1| permease, putative [Brucella microti CCM 4915] gi|255999307|gb|ACU47706.1| permease, putative [Brucella microti CCM 4915] Length = 382 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 110/326 (33%), Gaps = 20/326 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G M + ++F+++ S L P ++ + + + P+ K S +++ + Sbjct: 20 GAMAFFVLFLVVFSSVLL-----PFVAGMALAYFLDPVADRLE-KVGLSRLAASIVILLI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+ L+ + ++ + +S + + SE K++ Sbjct: 74 FLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLA--------NRDSEWLKKYIGI 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + L G F+ G +D + + F D + Sbjct: 126 DSTVIQQNLSSLLQQGAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFCMLLDWDRMVN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS ++I+R + + G + + G L G+ + +G Sbjct: 186 SIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP A++I + + + + + FI L+P LVG Sbjct: 246 FAGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGS 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 306 SVGLHPVWLMFALFAFGSLFGFTGML 331 >gi|152979696|ref|YP_001345325.1| hypothetical protein Asuc_2044 [Actinobacillus succinogenes 130Z] gi|150841419|gb|ABR75390.1| protein of unknown function UPF0118 [Actinobacillus succinogenes 130Z] Length = 354 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 116/344 (33%), Gaps = 17/344 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ + I+ ++LYF G AP+L AL++ + + +K + + Sbjct: 15 DPQAMGLAAILLFGFIALYFFSGLIAPLLIALVLAYLLEIPINFLNAKFKIPRLLAITLI 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L V + L + + L+S + + W++ +P + Sbjct: 75 LGGFIGLVAVIVFGLLPNLVGQTVNLLSDLPNMFNK---LHEWVATLPEHYPELVDYQLI 131 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S S + F ++ + + + + + + +FF +D ++ Sbjct: 132 DSLFSSTREKILAFGESAVKFSLSSIVNLVSIGIYAFLVPL-----MMFFMLKDKQALLS 186 Query: 187 QLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + HL W ++ + + IR L + I+A V + + + Sbjct: 187 GVTKFLPKNRHLASQVWTEMQQQIANYIRGKLLEIAIVA----AVTYVIFLFFQLRYPLL 242 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V I +IP GA I V++ + G + I + L PFL Sbjct: 243 LAVAVGISVLIPYVGAVIVTIPVALVAFFQFGAQATFWYIMTAYIISQLLDGNLLVPFLF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L L ++ G G+F L L+ + Sbjct: 303 SEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 346 >gi|313892846|ref|ZP_07826425.1| putative membrane protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442600|gb|EFR61013.1| putative membrane protein [Veillonella sp. oral taxon 158 str. F0412] Length = 373 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 114/335 (34%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ I F + + L+++ + + + + + + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKSESGWRYKIRRPLSLVLSFVTISVIVYFIARM 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ V + Q W+ + + + T + + Sbjct: 101 ALPQLVHSMSII--VASSPQLYTDFQTWMQHLTETIPMASNQTLMDTLSGESIVKYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G +I L+ L +IF I L R + + + + Sbjct: 159 GTKGGTYIVNAMGTVLSWTLNIGLGLIFAIYMLLDKERLMMQGKRIVKAYASDEWVNRVS 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ + + F+G I A+ G+++G WL + + + + +IP Sbjct: 219 YVTRVAVQTFSNFFVGQFIDALILGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 279 GGVIGAVMLLTVSPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMLIGVPLVATCYKLLMSDVDERLASNEGL 373 >gi|291087264|ref|ZP_06571876.1| putative permease [Clostridium sp. M62/1] gi|291075616|gb|EFE12980.1| putative permease [Clostridium sp. M62/1] Length = 398 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 105/327 (32%), Gaps = 13/327 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFLFYY 84 P I F S K I+ + + L ++ + + Sbjct: 37 PFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLTIILVAGVIILVMFG 96 Query: 85 GMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ + + ++ + IP + W+ + L I L Sbjct: 97 VIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQFQSDQAIKWGISLLG 156 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 NG+ + + + ++ Q+ + P Sbjct: 157 NGVGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKENLHLQVRKVIFAFIPKQKADA 216 Query: 204 SRIVPKVIRSTFL----GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + TF G + A+ G++ + +P + +G++ A A++P Sbjct: 217 ILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKMPYALLIGILIAFTALVPIFGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 AV +L+ N A + + I + P +VGG + LP + + G Sbjct: 277 FIGCAVGSFLIFMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSVGLPSIWVLAAVTIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 MG++G+ I L+++ I++E + Sbjct: 337 GNLMGIIGMLIFIPLVSVFYTIFREFV 363 >gi|170759096|ref|YP_001787178.1| hypothetical protein CLK_1238 [Clostridium botulinum A3 str. Loch Maree] gi|169406085|gb|ACA54496.1| putative membrane protein [Clostridium botulinum A3 str. Loch Maree] Length = 364 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 113/320 (35%), Gaps = 9/320 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A I + P+ F +K + F +I + V+ L I+ + + + Sbjct: 43 LVPFTWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFINTFVPKIIKNIG 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L I +W +D ++ ++ ++ L +N + Sbjct: 103 DLFVHSPDYINQTI---QWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI--SNLTNTFL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKISRI 206 + F + + +F +I + D S+ + L LF + + Sbjct: 158 NTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALFGGKNYSKILSFFKE 217 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V +G +I ++ GL+ + VP + I I MIP P + Sbjct: 218 VDIVFSKYIIGKSIDSLIIGLMCFAGLTTMKVPYAALISFIVGITNMIPYFGPFIGMIPA 277 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + N A + ++ I L P ++G + L + F + G T G++ Sbjct: 278 FIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIGGGTFGVM 337 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ + A+I + + I Sbjct: 338 GMFLSVPIAAIIKIYLDKYI 357 >gi|327314452|ref|YP_004329889.1| hypothetical protein HMPREF9137_2236 [Prevotella denticola F0289] gi|326944170|gb|AEA20055.1| putative membrane protein [Prevotella denticola F0289] Length = 359 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 131/363 (36%), Gaps = 16/363 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M++T+ + I +I ++ + + L G P A ++ + +PI K Sbjct: 1 MKQTITFDKFIRWALIALAVITAGFIINALSGALLPFFIAWLLAYLLYPIVKFVQYKLHV 60 Query: 58 SSTFLAVIATVSVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 L++I T++ + I LF+ + + L+ + + Sbjct: 61 PGRVLSIIITLAFVAAVITAIFLFIVPPMIDQFDRLMHVANRYLHETTHANNISAMVQRW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + + + + + C+++++M FF Sbjct: 121 VMENQFEIEKFLKSPDFTNAIKTAMPKLFS--VIGQTASIVISVIASCITLLYM----FF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++++ + +W +++ V + + + G ++++ G + + + Sbjct: 175 ILLDYETLTENWIKIFPKRVRPFWAGLAQDVERELNNYIRGQGLVSLCLGALFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELF 290 P + +GV+ I+ ++P + + L+ G F A+ Sbjct: 235 DFPMAIGMGVLIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFGSALAVFAVVQI 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL + L LI W+ + K Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGSLLGFIGLIVALPLTTLIIAYWQRYVTKEK 354 Query: 351 ENK 353 E + Sbjct: 355 EEQ 357 >gi|322387990|ref|ZP_08061597.1| membrane protein [Streptococcus infantis ATCC 700779] gi|321141263|gb|EFX36761.1| membrane protein [Streptococcus infantis ATCC 700779] Length = 387 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 116/337 (34%), Gaps = 1/337 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ I + + F + V+ +I+ + + + + E+ + ++ + + Sbjct: 36 IFILSKISFLFFPVIDFLSVVMLPVILSGLLFYLLNPLVDLMEKYKINRVLAISIIFIII 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+ ++ L +++V + R + D+ + + L + Sbjct: 96 AILLIIGLAVAIPNLQRQVVIFAQNVPSYLEDADRVIGDL-VTKRLPDDFRPQLEQVLAN 154 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T +N + S +++I M LF+ RDG + + Sbjct: 155 FSTQATAWASNISSKAVNWVSALISGTSQVIVALIIMPFMLFYLLRDGKGLRDYITQFLP 214 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + K+ V + + + G +A+ ++ + + G+ V LG+ + + Sbjct: 215 NKLREPVGKVLSEVNQQLSNYVRGQITVAVIVAIMFIIFFKIIGLRYAVTLGITAGFLNL 274 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P ++ L + + + +E I + + P ++G + + + Sbjct: 275 VPYLGSFLAMIPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPITIL 334 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ G+ G+ +G + A V+ K Sbjct: 335 FVLLTSGSMFGIWGVLLGIPIYASAKVVISAIFDWYK 371 >gi|289167764|ref|YP_003446033.1| membrane protein [Streptococcus mitis B6] gi|288907331|emb|CBJ22168.1| membrane protein [Streptococcus mitis B6] Length = 369 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 101/311 (32%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + + PI + + + ++ +++ ++ +++ + ++ Sbjct: 42 MIPFLLGGFLYYLTNPIVNFLQKYFKINRIIGILLTLCALVWGLVIGVVYFLPILINQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L++ + LS P + LS + N ++ + Sbjct: 102 SLIATSQTIYSRLQDLIVDLSTYPAFQNLD------IQATIQQLNLSYVDILQNILNSVT 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L II + L +F DG L+ + + + + Sbjct: 156 NSVGSVLSALFSTVLIIIMTPVFLVYFLLDGHKFLPMLERTVLKRDKLHIAGLLKNLNAT 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G+ I AI G + Y + G+ + + + + +IP P I Sbjct: 216 IARYISGVAIDAIIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYVGPSIGLIPMIIAN 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + ++ + + L P +VG +K+ + L+ G++G+ + Sbjct: 276 IFTDPHRMLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVIGMIV 335 Query: 331 GPVLMALIAVI 341 +++ I Sbjct: 336 AVPTYSILKEI 346 >gi|163737418|ref|ZP_02144835.1| hypothetical protein RGBS107_17843 [Phaeobacter gallaeciensis BS107] gi|161388944|gb|EDQ13296.1| hypothetical protein RGBS107_17843 [Phaeobacter gallaeciensis BS107] Length = 355 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 121/342 (35%), Gaps = 18/342 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I V L+ L P + I + PI S S T + TV M LF+V Sbjct: 16 AVVIAVVLWALGDVLLPFVLGAAIAYLIDPIADRLES-MGLSRTAATAVITVFAMLLFVV 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + +M +L + A ++ + + + Sbjct: 75 ILLVVVPTLIYQMLDLAKVLPEAFKNL------------RDFVQQQAPSLFDEGSRAQQT 122 Query: 137 SETFLKTNGIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +T I G ++ + + + + + D + ++D L Sbjct: 123 IVSIAQTLQSKAIGVLEGVVGSAVSLVNVLILFVIVPVVAVYLLLDWDRMVARIDELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + KV+ S GM + + G A L G+ +A+G I ++ I Sbjct: 183 DHAPTIRELAARIDKVLASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + ++I L + G+ ++ + AI I L P LVG + L + Sbjct: 243 PYLGALIGGVLAIGLALFQFWGDWWSIGMVAGVFAIGQVIEGNFLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + VI + + +++ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVIARFLVEQYLDSR 344 >gi|325964271|ref|YP_004242177.1| permease [Arthrobacter phenanthrenivorans Sphe3] gi|323470358|gb|ADX74043.1| putative permease [Arthrobacter phenanthrenivorans Sphe3] Length = 418 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 85/225 (37%), Gaps = 1/225 (0%) Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + ++ + A + ++ MI+ LFFF +DG I Sbjct: 181 EQLDQARQGIVEFATSSQVRSGAITGLSVVTEFFAGAALMIVILFFFLKDGAKIWNFFLR 240 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 A +++ +V+ G I+A+ + + +G+A + VP + L +I I Sbjct: 241 PFSGAREAKLRRVGSRTLEVLGGYVRGTAIVALVDTVAIGAALLIMQVPLALPLAIIVFI 300 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP GA ++ ++ L+ A + + L+P ++G ++L Sbjct: 301 GAFIPLVGATVAGILAALVALVANGPVVALIVVAVVIAVNQLEGDLLQPIVMGKSLQLHA 360 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L G G++G + L A+ I + ++ Sbjct: 361 LVILMALTAGTILAGIVGAVLSVPLAAVAWAIIQVWTAEDPNLED 405 >gi|293605887|ref|ZP_06688257.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815674|gb|EFF74785.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 439 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 107/332 (32%), Gaps = 9/332 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + +L SL + F PV+ A+++ + P + + I + +M + Sbjct: 97 TLTVLAVLFSLKMAQEFIVPVVMAIVVAYALDPAVALMERVRVPRP-----IGIMLLMAI 151 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L L Y ++ +V + ++ L+ G + + Sbjct: 152 IAIGLAGLVYATQSQVSSIVEALPEISRKISRTVGGLTSGHGSLLERLKGAASVLQDTGG 211 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + F + I + +FF G + ++ + Sbjct: 212 TPSGRQVVVAKSDAGLSEFLLWGSKGLAAFLGQAIMSVFLVFFLLLSGNAFKRKFVKVAG 271 Query: 194 HLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I M + + G++ A+ + G+ + V+ + Sbjct: 272 KTLSQKKISVHMLDQINSSIHMYMAMMLVTNVALGVLSWGAFRMLGLENAATWAVVAGAL 331 Query: 252 AMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP G ++ I L++ G I A + + ++ + ++ G K+ Sbjct: 332 HIIPYFGPLLTAVGTGIAALMQFGEIGPALQVAGSSVVIALLIGVLVTTWMSGRIAKMNS 391 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + F L+ G+ G + + + V+ Sbjct: 392 VAVFIVLLLFTWLWGIWGTLLSVPIAFIAKVV 423 >gi|37680691|ref|NP_935300.1| permease [Vibrio vulnificus YJ016] gi|320155639|ref|YP_004188018.1| putative permease PerM ( YfgO) [Vibrio vulnificus MO6-24/O] gi|37199440|dbj|BAC95271.1| predicted permease [Vibrio vulnificus YJ016] gi|319930951|gb|ADV85815.1| putative permease PerM (YfgO) [Vibrio vulnificus MO6-24/O] Length = 356 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 123/352 (34%), Gaps = 14/352 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ V++YF AP+L A+++ + WP+ + + T + Sbjct: 15 DPHAVSLVAILLFGFVTIYFFGHLLAPLLVAIVLAYLLEWPVAQ--LRRFGVPRTVGVIA 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ L L ++ L++ + + ++++ +P Sbjct: 73 VILLFIGLMLIALFGLIPTIWTQVGNLINDIPNMYNG---LQQFIASLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ + G + + + + +I + + +FF +D + Sbjct: 126 NLQIVEAIVTNAKNKVLGMGESVVKGSLASL-ISIATLAVYLILVPLLVFFLLKDKEEMM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L K+ + + I + G + + G V + + + L Sbjct: 185 RMASGLLPK-NRNLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGISTEFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ +WK + + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSQDEHEAQP 355 >gi|153816489|ref|ZP_01969157.1| hypothetical protein RUMTOR_02742 [Ruminococcus torques ATCC 27756] gi|317500769|ref|ZP_07958986.1| hypothetical protein HMPREF1026_00929 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089753|ref|ZP_08338647.1| hypothetical protein HMPREF1025_02230 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846185|gb|EDK23103.1| hypothetical protein RUMTOR_02742 [Ruminococcus torques ATCC 27756] gi|316897862|gb|EFV19916.1| hypothetical protein HMPREF1026_00929 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403636|gb|EGG83191.1| hypothetical protein HMPREF1025_02230 [Lachnospiraceae bacterium 3_1_46FAA] Length = 380 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 135/376 (35%), Gaps = 22/376 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLK--------GFFAPVLSALIIGFTSWPIYSSFIS 53 +E M + ++ + I+ +I + Y L G P L I F S F Sbjct: 5 KENMKKMRELIVFTIILLIALWNYKLLFEWIGFAFGIVTPFLIGGGIAFVLNVPMSFFEE 64 Query: 54 KKEESST---------FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 + ++ V + I ++ + + + E+ + V + Q + Sbjct: 65 TLFGNKRVKEKKLAKRLARPLSLVLTIVAVIGVVVLVMFVVIPELAQTVLSLGKTIQAFV 124 Query: 105 PVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA----SRFGMI 159 P + +L ++ W +L + S NG + Sbjct: 125 PEAQHFLEELFTDNSEIRAWLNNLDVDLDKLLDSVIAFFRNGAGNVLNSTVYAIGSIVNG 184 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + ++ +F L + G + + + + + + K+ + K + G Sbjct: 185 VTTFVIAFVFACYILLQKEKLGVQVKKVMHAFLKEKWEKRCLKVCTLTSKTFSNFLTGQC 244 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + A+ G + A L +P + +GV+ A A+IP V +L++ + A Sbjct: 245 LEALILGSMFFVAMSLFKMPYALLVGVLVAFTALIPIFGAFIGCVVGAFLILMVDPLQAL 304 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + I + P +VG + LP + + G MG++G+ I L++++ Sbjct: 305 FFVIMFLVLQQIEGNLIYPKVVGNSVGLPSIWVLAAVTIGGSLMGVVGMLIFIPLVSVVY 364 Query: 340 VIWKESIMAIKENKEK 355 +++ES+ E K++ Sbjct: 365 TLFRESVYKRLEQKQR 380 >gi|111657945|ref|ZP_01408653.1| hypothetical protein SpneT_02000864 [Streptococcus pneumoniae TIGR4] Length = 343 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 107/316 (33%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + PI + + + +I +++ ++ +++L Sbjct: 11 VLNTIMIPFLLGGFFYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 70 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 71 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 124 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 125 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 184 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 185 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 244 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 245 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 304 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 305 VGMIVAVPTYSILKEI 320 >gi|161502354|ref|YP_001569466.1| hypothetical protein SARI_00387 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863701|gb|ABX20324.1| hypothetical protein SARI_00387 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 355 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 ATSIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLVFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|298484321|ref|ZP_07002483.1| membrane protein [Bacteroides sp. D22] gi|298269511|gb|EFI11110.1| membrane protein [Bacteroides sp. D22] Length = 360 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 125/336 (37%), Gaps = 16/336 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMIYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ ++LSE + Sbjct: 87 --VPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEENILATIK 144 Query: 147 DFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D +I++ L + + + + Sbjct: 145 DTVPRVWTLLAESLNILFSILASFIILLYVIFILL-DYEAIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 MG+LG+ I L L+ ++ I+ ++NK Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEKNK 359 >gi|294792910|ref|ZP_06758056.1| putative membrane protein [Veillonella sp. 6_1_27] gi|294455855|gb|EFG24219.1| putative membrane protein [Veillonella sp. 6_1_27] Length = 373 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 114/335 (34%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ I F + + L+++ + + + + + + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKCDSGWKYKIRRPLSLLLSFVTISVIVYFIARM 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ V + Q W+ I + + T + Sbjct: 101 ALPQLIHSMSII--VAASPQLYTDFQTWMQHITETIPMASNQTIIDALSGENIAKYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G +I L+ L +IF + L R + L + + + Sbjct: 159 GTKGGTYIVNAMGTVLSWTLNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVSRVS 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ + + F+G I A+ G+++G WL + + + + +IP Sbjct: 219 YVTRVAVQTFSNFFVGQFIDALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ + +A + I I + P +VG + LP L F ++ G Sbjct: 279 GGIIGAVMLLTVSPMDALIYVIILEILHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMLIGVPLVATCYKLIMTDVDGRLASNEGL 373 >gi|154687227|ref|YP_001422388.1| YubA [Bacillus amyloliquefaciens FZB42] gi|154353078|gb|ABS75157.1| YubA [Bacillus amyloliquefaciens FZB42] Length = 386 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 116/333 (34%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK PV+ I+ + PI + K + ++ + ++ L + Sbjct: 42 FIFTPIIVLLKTIALPVILTGIVYYLLNPIVD-ILEKIRVKRVYSILLLYLIIIGLITIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + V + G + ++ + L Sbjct: 101 VVSIIPFLKEQIMSLIDNLPKYVDI---VEDQTKSLIGSDFVNQAQKTMNINISDLANKV 157 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + G + + +SI+ + LF+ +DG + + Sbjct: 158 SAQAATIANSTFTGVGNFIGALT-EVIISIVTVPFILFYLLKDGKKLPIYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTMLSEMNHRLSSYIRGQVIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSVVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + + K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPLMLLKLAIVWTVVQLVEGKLISPQIMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+I V+ K Sbjct: 337 TAGKLFGVVGIILAIPGYAVIKVVTTHLFDWFK 369 >gi|1620467|emb|CAA67775.1| membrane protein [Streptococcus pneumoniae] Length = 369 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 113/318 (35%), Gaps = 10/318 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + I G++I AI G + Y + G+ + + + + +IP G I Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + I + + + + + + + VD L P +VG +K+ + L+ Sbjct: 271 MIIANIFT--VPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIY 328 Query: 324 GLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 329 GVVGMIVAVPTYSILKEI 346 >gi|332076154|gb|EGI86620.1| hypothetical protein SPAR68_0878 [Streptococcus pneumoniae GA41301] Length = 328 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 107/311 (34%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + + PI + + + +I +++ ++ +++L + ++ Sbjct: 1 MIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLS 60 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ + V + D+ L + +L + + N ++ + Sbjct: 61 SL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNILNSVS 114 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + L +I + L +F DG L+ + + + + Sbjct: 115 NSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLKNLNAT 174 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G++I AI G + Y + G+ + + + + +IP P I Sbjct: 175 IARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIPMIIAN 234 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + ++ + + L P +VG +K+ + L+ G++G+ + Sbjct: 235 IFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIV 294 Query: 331 GPVLMALIAVI 341 +++ I Sbjct: 295 AVPTYSILKEI 305 >gi|237718220|ref|ZP_04548701.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452404|gb|EEO58195.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 360 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 125/336 (37%), Gaps = 16/336 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P A +I + +P+ F K S +++ ++ ++ + V L +L Sbjct: 31 LSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVIGVTLFYLL---- 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++S++ N + + SE +++ ++LSE + Sbjct: 87 --VPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEENILAAIK 144 Query: 147 DFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D +PR + I S I ++ +F D +I++ L + + + + Sbjct: 145 DTVPRVWTLLAESLNILFSILASFIILLYVIFILL-DYEAIAEGWLHLLPNKYRTFASNL 203 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G ++A G++ + + P +ALG+ + M+P I F Sbjct: 204 VHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFL 263 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F AI I D L P ++G L L Sbjct: 264 PTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGLNPAIILLSLS 323 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 MG+LG+ I L L+ ++ I+ ++NK Sbjct: 324 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEKNK 359 >gi|237732470|ref|ZP_04562951.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908009|gb|EEH93927.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 354 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 121/351 (34%), Gaps = 22/351 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPI----YSSFISKKE 56 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLIILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTVRLEHIGCSRRWA 69 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S + + + +M ++P+ + G+ ++++ + + +PR + Sbjct: 70 TSIVLVVFVGILLLMAFVVMPVAW--QQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDA 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + S ++ D + +++ + L + ++ + + +FF Sbjct: 128 GIIDAMAENMRSRMLTM------------GDSVVKYSLASLVGLLTLAVYLVLVPLMVFF 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D + + + ++ + + + I + G + + G+ + L Sbjct: 176 LIKDKGQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMVVVGVATWLGFLLF 234 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDK 294 G+ + L V+ +IP GA + V + L G F I + Sbjct: 235 GLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGN 294 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P L + L L +V G G+F L LI + Sbjct: 295 LLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVMHAW 345 >gi|168216347|ref|ZP_02641972.1| putative membrane protein [Clostridium perfringens NCTC 8239] gi|182381331|gb|EDT78810.1| putative membrane protein [Clostridium perfringens NCTC 8239] Length = 366 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 4/336 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILTVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSE 138 +L + EL+ + V ++I E +L H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTN---YVQNLFTEIMASFKVPEGINSYLPHGDTNKLITFI 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + T +++ A +++ + I L + S+ + Sbjct: 151 GSMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKDLGN 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +I+ + I + I ++ G++ + + L V+ I MIP Sbjct: 211 EILEFIKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V ++ + + A + ++ I L P L+G + L G+ Sbjct: 271 PFIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTL 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G +G+ +G +M++I + + I + E Sbjct: 331 GGAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|212693716|ref|ZP_03301844.1| hypothetical protein BACDOR_03236 [Bacteroides dorei DSM 17855] gi|237709238|ref|ZP_04539719.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724467|ref|ZP_04554948.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265754915|ref|ZP_06089829.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663737|gb|EEB24311.1| hypothetical protein BACDOR_03236 [Bacteroides dorei DSM 17855] gi|229437026|gb|EEO47103.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229456623|gb|EEO62344.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234526|gb|EEZ20105.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 378 Score = 79.5 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 127/366 (34%), Gaps = 21/366 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + + +R ++ ++++ + +L G P A +I + +P+ F K Sbjct: 1 MLQKKITFDSFIRGILTAVVIIGILYLVNQLSGVLLPFFVAWLIAYLIYPMVIFFQHKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSD 112 + +++ + V+ I ++E +KEL+++ + +P +++ Sbjct: 61 LKNRVISIFVVLLVLLSIITLAFIGLVPPIIEEFGKLKELLTEYFIEGSKQAAIPGTVAN 120 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 L + + L + ++ I + S I ++ Sbjct: 121 F-IKEHIDMLKIHEALNENNFANTMRNVLPQ-----VWTLLTQSVNIVVSVFTSFIILLY 174 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 FF D +I++ L +I V + F G +A G++ Sbjct: 175 T-FFILLDYEAIARGWIKLVPIKHREMTIRIVTDVQDGMNKYFRGQAFVAFCVGILFSIG 233 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCL--FLWGA 286 + + P + G+ ++ M+P I+F + L+ G F FL Sbjct: 234 FLIIDFPLAIGFGLFIGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFC 293 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I I D + P ++G L L MG++G+ I +L+ ++ I Sbjct: 294 IVQIIQDGLIVPKVMGKITGLNPAIILLSLSVWGALMGIVGMIIALPCTSLMLSYYQRYI 353 Query: 347 MAIKEN 352 ++ Sbjct: 354 RIKEKE 359 >gi|222480000|ref|YP_002566237.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452902|gb|ACM57167.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 341 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 121/315 (38%), Gaps = 29/315 (9%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC--LFIVPLLFLFYYGMLEMKE 91 V+ A+ + + +PI + + ++ + + +VPLL++ Y E+ E Sbjct: 31 VVFAVTVAYVLYPICQWLVGRGLSRRIACVGTTVIAFVAAAILVVPLLYVLYRRRAELIE 90 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 ++ ++ +P + EL + + + + ++ ++ + Sbjct: 91 ILEQIPDV-------------VPISVGGFELVIEMVPYVAAAEV------------WVRQ 125 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A L ++ ++ S+ + + + ++ + + Sbjct: 126 VALALAAAAPRLVLELVVFTFLVYGLLYRPGSVEAAVFGVVPAEYHDIPTRLHERTRETL 185 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 S ++ A G ++ +W G S V L VI ++ IP G + A+++ L Sbjct: 186 YSIYVLQAATAAGTSVLAFVVFWALGYGSPVLLAVIAGVLQFIPIIGPSVLVVALAVGDL 245 Query: 271 IKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + A + + G + + V D +R L ++ F G VGG+ T+G +GL Sbjct: 246 LVEETGRAIAVLVLGLVLVSFVPDAVIRTQLADWTGRISPGLYFVGFVGGILTLGAVGLI 305 Query: 330 IGPVLMALIAVIWKE 344 +GP++++L+ + Sbjct: 306 VGPLVVSLLLEVIDM 320 >gi|311064797|ref|YP_003971522.1| hypothetical protein BBPR_1452 [Bifidobacterium bifidum PRL2010] gi|310867116|gb|ADP36485.1| Conserved hypothetical membrane spanning protein with DUF20 domain [Bifidobacterium bifidum PRL2010] Length = 534 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 110/338 (32%), Gaps = 19/338 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVS 69 +I + ++ G + ++ ++I P+ S + + ++ + Sbjct: 35 TVIAVFAAIFVWTSWGKISTIVLDVVISIFIALAVEPLVVSMVRH-GWKRGLASAVSLIG 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L + ++ +V + + + + + Sbjct: 94 LAVIVMALLTLFGNMFVQQLISMVKGLPSIYTEIVDA------------VKQYTSFDMPK 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++L + ++T+ I A M + L+++ +++ ++ G + + L Sbjct: 142 IENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLLTVLMVTYYISAAGPKMRRSLC 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +V + I +I+A + VP + L + Sbjct: 202 QWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATCTAVFLEIIHVPYWLPLALFCG 261 Query: 250 IMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I++ +P G I ++ ++ + ++ + I + L P + + L Sbjct: 262 IVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFIIVYQQIENLILSPKVSQRTMDL 321 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F ++ G LG F+ + A + I+K Sbjct: 322 NPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVY 359 >gi|282848785|ref|ZP_06258179.1| putative membrane protein [Veillonella parvula ATCC 17745] gi|282581499|gb|EFB86888.1| putative membrane protein [Veillonella parvula ATCC 17745] Length = 373 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 113/335 (33%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ I F + + L+++ + + + + + + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKCGSGWKYKIRRPLSLLLSFVTISVIVYFIARM 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ V + Q W+ I + + T + Sbjct: 101 ALPQLIHSMSII--VAASPQLYTDFQTWMQHITETVPMASNQTIIDALSGENIAKYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G +I L+ L +IF + L R + L + + Sbjct: 159 GTKGGTYIVNAMGTVLSWTLNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVS 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ + + F+G I A+ G+++G WL + + + + +IP Sbjct: 219 YVTRVAVQTFSNFFVGQFIDALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 279 GGIIGAVMLLTVSPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMLIGVPLVATCYKLIMTDVDGRLASNEGL 373 >gi|212638351|ref|YP_002314871.1| putative permease [Anoxybacillus flavithermus WK1] gi|212559831|gb|ACJ32886.1| Predicted permease [Anoxybacillus flavithermus WK1] Length = 372 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 124/339 (36%), Gaps = 12/339 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ L SLY++ P L AL I F P+ K + ++ + ++ L Sbjct: 16 IFVIIAGLASLYYVSTLTYPFLIALAITFFINPVVDVLEKKAKMPRALAVIVVLIFLLAL 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHP 130 + L + + L + V + I + ++++ IP + L+ + Sbjct: 76 VAGLVTLLVAEIVTGTQYLATVVPNHFQKLVIYIEQFVASQIIPLYNQLATLFKNLDTSQ 135 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMI-------FLDYCLSIIFMIIALFFFYRDGFS 183 Q + + + T + +F ++ IF ++A FF +D + Sbjct: 136 QDTIMTNIQSVGTKIATTVGQFIQNILQNIPSIIGWLPNFATIFIFSLLATFFISKDWYR 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L K+ + K + + L++ + V + Sbjct: 196 LKALFQKLLPTKVQTSTTKVFAELKKALFGFLKAQATLISITTLIVLVGLLVLRVEYAIT 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +I I+ ++P G + F +Y + GN A L + + L + + P L+ Sbjct: 256 IALIIGIVDVLPYLGTGLVFVPWIVYAAMSGNTHFAIGLGVLYVVVLVQ-RQVMEPKLLS 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L L T L G + +G LGL +GPVL+ + + Sbjct: 315 SNIGLDPLATLIALFVGFKLIGFLGLIVGPVLLVIGRTL 353 >gi|90414071|ref|ZP_01222054.1| putative permease PerM [Photobacterium profundum 3TCK] gi|90324866|gb|EAS41394.1| putative permease PerM [Photobacterium profundum 3TCK] Length = 356 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 113/339 (33%), Gaps = 14/339 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ ++YF AP+L A+++ + WP+ + + T ++ Sbjct: 15 DPHAVSLIAILLGGFFTIYFFGNLIAPLLVAIVLAYLLEWPVMR--LERLGLPRTVAVLV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L ++ L ++ + V + ++S +P + Sbjct: 73 VLLIFASLMVMAFFGLVPTIWHQVGNFAADVPTMFN---DLQHYVSSLPERYPDFVQPHQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ +L+ ++ + S + +I + + +FF +D + Sbjct: 130 AITFMTTLREKVMGLGESVVKGSLASLVS-----LATIAVYLILVPLLVFFLLKDKDEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G G+ + + + V LG Sbjct: 185 ATMSGILPK-NRRLTSKVGAEMNEQISNYIRGKVTEIFIIGIASYITFAVMDLRYAVLLG 243 Query: 246 VITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA V+ + L G + L + + L P L Sbjct: 244 VLVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPDFWWLLAAYGVIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|304570643|ref|YP_832075.2| hypothetical protein Arth_2596 [Arthrobacter sp. FB24] Length = 398 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 106/320 (33%), Gaps = 11/320 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +++AL I P+ +K I + + + + + F + + Sbjct: 90 IVTALFIALGLDPVVRWLEGRKLPRP-----IGILVSVTVLVSAVAGFFATLIPTI---- 140 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 V Q PRW+ D + + + + + L + + + I Sbjct: 141 --VQQVTQVVQEAPRWIQDFIDSDFFRSVDDQFGVRERITQELEKFVNNPDAMGGIFGGV 198 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 FG + + +++ +F ++ + L A + +S + + + Sbjct: 199 VGFGSTVANGLFGTLIVLVLSLYFLAALPAMKKWGYRLAPRSRRARVEALSEEITGSVGN 258 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G +A+ + GVP V L + A++A IP + + + + Sbjct: 259 YVIGQACVALLNATFAFIVMSIVGVPFAVLLAFVVALLAFIPLVGGMIAGVLVTLIALTA 318 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + L + P ++ + +P ++ G +G+LG I Sbjct: 319 GWQTALVYAICYFAYLQFEAYFISPRIMQKAVAVPGAVAVISVIAGGSLLGVLGALIAIP 378 Query: 334 LMALIAVIWKESIMAIKENK 353 A + ++ KE + ++ Sbjct: 379 TAAAVMLLVKEIFIVRQDKH 398 >gi|313905990|ref|ZP_07839344.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] gi|313469174|gb|EFR64522.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] Length = 454 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 23/337 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE----------------SSTFLAVIATVSVMCLF 74 P+L I + P+ S +A + V+ Sbjct: 103 LRPLLIGFAIAYLLDPLAGRLEKVLNGVKKKLRKPNAKKPMGSSRGLAVALAWLVVLTAI 162 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ + + + +LVS + + L + + S S Sbjct: 163 VL-VASMIVSTISHSVQLVS-LNSLDSLVYSFADTLKSFSKSITGALKQMHIPSAEISSY 220 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + G + + IF +I +F DG + + Sbjct: 221 TQKLGETISKGFSEMATGMLFSLKNVTGIVSTTIFALIFGIYFMLDGEGLKHYWGHVYHS 280 Query: 195 LFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + +V G + + +V+ A L GV V +G++T I Sbjct: 281 LVSDSVSRRTSDLIKNADRVFSGYIRGQFLDGVFIAVVITIALSLCGVKYAVIIGILTGI 340 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++P G+ I++T + L+ +I + + I + P L+ I + Sbjct: 341 GNLVPYLGSFIAYTTTILVCLVSFDIKRMIIAIIVIFVVQTIDGNVVNPKLLSSSISIHP 400 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L+ G GLLG+ + AL+ + +++ I Sbjct: 401 MLVIASLIIGAAIGGLLGMLLAVPSGALVKIYFEKFI 437 >gi|157144583|ref|YP_001451902.1| hypothetical protein CKO_00303 [Citrobacter koseri ATCC BAA-895] gi|157081788|gb|ABV11466.1| hypothetical protein CKO_00303 [Citrobacter koseri ATCC BAA-895] Length = 353 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 113/347 (32%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWP-TVRLEAIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V V L ++ + + + + + N+ P M A Sbjct: 69 ATSIVLIVFVGILLLMAFVVMPVAWQQGIYLIRDMPGMLNKLSDYAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + L ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLTLGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLIKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAGQVWME-MNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|300723562|ref|YP_003712867.1| putative permease [Xenorhabdus nematophila ATCC 19061] gi|297630084|emb|CBJ90721.1| putative permease (PerM family) [Xenorhabdus nematophila ATCC 19061] Length = 355 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 120/358 (33%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I+ +I+ + +YF G APVL+A+++ + WP + K S Sbjct: 10 RRRFTDPQVIVLSVILLVGFGIIYFFNGILAPVLAAIVLAYLLEWPTVQ--LEKLGCSRA 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I M + + +L + + L S +P L+ Sbjct: 68 LSVSIVLTVFMGISSLVILIVAPTVWQQGLNLFS----------DLPNMLNRFNVYAHTL 117 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + ++++ + + + +F+ + L + +I + + +FF Sbjct: 118 PARYPALVDAGIIDMIADNLRSKISLAGESVFQFSVASLIGLLTLAIYLILVPLMVFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L + K + + + I + G I + + G+ Sbjct: 178 KDKNQMVAALQRVLPRNHGLAGK-LWNEMNQQITNYIRGKVTEMIILTVCTYIVFAFFGL 236 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTL 296 + L V+ + +IP + T I L G + LF+ + + L Sbjct: 237 NYSLLLAVLVGLSVLIPYIGTVIVTIPVIIVALFQWGLGADFWTLFIAYLVVQGLDGNLL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L + L L ++ G G+F L LI + E ++ Sbjct: 297 VPILFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLIKAVIHVWPEDKIEGEK 354 >gi|162455165|ref|YP_001617532.1| hypothetical protein sce6883 [Sorangium cellulosum 'So ce 56'] gi|161165747|emb|CAN97052.1| membrane protein, putative [Sorangium cellulosum 'So ce 56'] Length = 485 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 1/204 (0%) Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +LK N + + R ++ ++ + I + L Sbjct: 213 AYLKENSLAVL-RIGQAIATAISRGIFNLFMTLMLAGYIILTHEKILRFFRELWHPTSRD 271 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + R + + + G +I + G++ +WL + L V+ +M++IP Sbjct: 272 SFDRFLRRLDRGLSGVVRGQLLICLVNGVLSAIGFWLFDLKYWPILSVLAGVMSLIPIFG 331 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + ++ + + + A + W + L P ++G K+ + L+ Sbjct: 332 SILSSIPAVLIGLTQSFGTAVGVLAWIVGIHQLEANFLNPKIIGDAAKIHPVLVVLALLV 391 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G + G ++L I+ Sbjct: 392 GEHFFQITGALFAVPCLSLAQTIF 415 >gi|163853611|ref|YP_001641654.1| hypothetical protein Mext_4214 [Methylobacterium extorquens PA1] gi|163665216|gb|ABY32583.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 652 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 107/368 (29%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLASALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WA 119 + ++ ++ L + E +L + + + L Sbjct: 71 AVLLVVVLAFGL-----LGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF---------------------IPRFASRFGM 158 S+ ++ + + + + + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRSGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|269957420|ref|YP_003327209.1| hypothetical protein Xcel_2637 [Xylanimonas cellulosilytica DSM 15894] gi|269306101|gb|ACZ31651.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 421 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 109/332 (32%), Gaps = 15/332 (4%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I + L+ LK PV AL++ P+ + ++ V + Sbjct: 28 LLIGTAVAAVLWVMGQLKTIIVPVAVALLLSVLLRPVRDGLERRARFPRGLATAVSVVGL 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + EL + V V WL++ P G+ + ++ Sbjct: 88 VVVVGALISLAGQQIVAGFAELADQAVAGFNE---VRNWLAEGPLGIDSGQITEYWDQFA 144 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S +G + A + + + L FF DG +I L + Sbjct: 145 DSFT--------GDGASGLLSGALGAATTVGHLLVGALIALFCLIFFLVDGRAIWTWLVN 196 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + R + + ++A+ + +G + LGV+ I Sbjct: 197 LLPVNARERMHQAGRRGVVTLSAYVRTQILVALVDAAGIGIGAAFFVPKLALPLGVLVFI 256 Query: 251 MAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P I A++ + +L+ A + I L+PFL+G + L Sbjct: 257 GSFVPIVGAIVTGAIACVVVLVSQGWVAALIMLAIVLAVQQIEGHVLQPFLMGHAVSLHP 316 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + G G++G L A++ + Sbjct: 317 VAVVLVVAAGSLAAGIIGALFAVPLAAVLNTV 348 >gi|148273430|ref|YP_001222991.1| AI-E2 family membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831360|emb|CAN02316.1| conserved membrane protein, AI-E2 family [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 411 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 119/335 (35%), Gaps = 17/335 (5%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ ++ V + L+ P+ A+++ PI + I+ + V Sbjct: 55 LLILGVLGVVAWLVIQLEYVVIPLFLAIVLAALLVPISNWMQRHHVP-KWLAVAISEIGV 113 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + L ++ + + +L+D P + +L + Sbjct: 114 IVAVAALVYLVTTQIIGQYDSLRAQTLTRY---ADLRGFLTDGPLQLSEQQLNDAYAQAV 170 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ + L A ++ ++ + F DG + + + Sbjct: 171 DAVQRDAGALLSG---------ALSVTSSLGHVLTGVLLVLFSTLFILIDGAGMWRWVVR 221 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L L + +++ ++A+ + + + + GVP + +GV+ + Sbjct: 222 LFPRLARPAVDGAGKAGWSTLQNFVKVQVLVALIDAVGIAGGAAIIGVPLAIPIGVLVFL 281 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP + +++++ L+ + A + + + L+P ++G +K+ Sbjct: 282 GSFIPIVGAVVTGTLAVFVALVYNGLTQALIMVGIVLLVQQVEGHVLQPLIMGSVVKVHP 341 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + G G+ G F L+A + + K Sbjct: 342 LAVVLSVAAGGMVAGIAGTFFAVPLVATLNSMVKH 376 >gi|220935418|ref|YP_002514317.1| permease [Thioalkalivibrio sp. HL-EbGR7] gi|219996728|gb|ACL73330.1| permease [Thioalkalivibrio sp. HL-EbGR7] Length = 368 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 114/331 (34%), Gaps = 9/331 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + Q + + + +Y+L+ P L A + + P+ E Sbjct: 4 QPGAASQRLTLLLFFAAAGLLVYWLRPILTPFLLAALFAYLGNPLVLRLQR--EGRRWKW 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS--DIPGGMWAS 120 + T +V+ +F++ L L + + L ++ + W +P Sbjct: 62 RLPRTAAVILVFLLLFLGLLLAVLTLVPVLQRELARFLEWLPQWLAWFRAEALPWLENRF 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS--RFGMIFLDYCLSIIFMIIALFFFY 178 L + +L L + G + S R G + + L+++ + + F+ Sbjct: 122 GLPLEG-PEMGTLSGLLSEHWQQAGEWALGALGSMGRSGGLVFAWLLNLVLVPVVTFYLL 180 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RD + L L +I R V+ + G ++ I W AG+ Sbjct: 181 RDWERLVAALHGLLPRSIEPRVVRIVRESDAVLATFIRGQLLVMISLAAFYAVGLWFAGL 240 Query: 239 PSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +A+GV +++ +P G V+ LL + + + + + L Sbjct: 241 DLAIAVGVTAGLVSFVPYLGVIVGVGLGVAAALLQSTDPWLLIWVLAVFGVGQLLESLVL 300 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 P+LVG I L + F ++ G + G G Sbjct: 301 TPWLVGDRIGLHPVAVIFAVLAGGQLFGFFG 331 >gi|225180849|ref|ZP_03734297.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] gi|225168330|gb|EEG77133.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] Length = 350 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 124/347 (35%), Gaps = 15/347 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 P + ++ I+ L+F+ ++ + +I ++ P+ + K S + Sbjct: 12 PLIVRTLAVILTIIAVLWFVHKISWVIGILVVSTMIVYSISPLSNYLTRKGVPHSVSVLS 71 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + F+ L EM+ L + A + +P L I M + + Sbjct: 72 VYLLLLFSAFLF-FYLLIPTLTNEMRALARYL--ATDYSYLLPEILLQIDQLMASENIHQ 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 Q+L + + + T + ++ ++ +++ RD + Sbjct: 129 ALQDVAQNLPNMLQQAVFTMTL---------VTGSIFSGLTEVLIVLFLVYYMLRDLSHV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + +I+ + + G + G++ G A + G+P + L Sbjct: 180 KRGIVRLFPPAWRKESTHVLQIIDLKVGAYLRGNLLRCTAVGIITGIALAIVGMPFALML 239 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++ I+ +I P ++ L + N + + + + L P L+G Sbjct: 240 GILAGILNIIVYIGPYLAGIPAVLLALTPNTPHPILIVVLYVTVQAVDAFLLTPNLLGKA 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L L+ G +G++G + + A I VI + + Sbjct: 300 VDLRPFTVIISLLIGGTLLGVIGFLLAIPVAATIKVIIYHYYLKEDQ 346 >gi|149026354|ref|ZP_01836509.1| hypothetical protein CGSSp23BS72_01657 [Streptococcus pneumoniae SP23-BS72] gi|147929316|gb|EDK80315.1| hypothetical protein CGSSp23BS72_01657 [Streptococcus pneumoniae SP23-BS72] Length = 369 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 108/316 (34%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + + + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRIQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 271 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 331 VGMIVAVPTYSILKEI 346 >gi|294795119|ref|ZP_06760254.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294454481|gb|EFG22855.1| putative membrane protein [Veillonella sp. 3_1_44] Length = 373 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ I F + + L+++ + + + + + + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKCDSGWKYKIRRPLSLLLSFVTISVIVYFIARM 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ V + Q W+ I + + T + Sbjct: 101 ALPQLIHSMSII--VAASPQLYTDFQTWMQHITETIPMASNQTIIDALSGENIAKYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G +I L+ L +IF + L R + L + + Sbjct: 159 GTKGGTYIVNAMGTVLSWTLNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVS 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ + + F+G I A+ G+++G WL + + + + +IP Sbjct: 219 YVTRVAVQTFSNFFVGQFIDALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ +A + + I + P +VG + LP L F ++ G Sbjct: 279 GGIIGAVMLLTVGPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMLIGVPLVATCYKLIMTDVDGRLASNEGL 373 >gi|254563547|ref|YP_003070642.1| membrane transport protein [Methylobacterium extorquens DM4] gi|254270825|emb|CAX26830.1| putative membrane transport protein [Methylobacterium extorquens DM4] Length = 652 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 107/368 (29%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WA 119 + ++ ++ L + E +L + + + L Sbjct: 71 AVLLVVVLAFGL-----LGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF---------------------IPRFASRFGM 158 S+ ++ + + + + + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRTGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|158336770|ref|YP_001517944.1| hypothetical protein AM1_3638 [Acaryochloris marina MBIC11017] gi|158307011|gb|ABW28628.1| conserved membrane protein [Acaryochloris marina MBIC11017] Length = 351 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 124/358 (34%), Gaps = 25/358 (6%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 L ++R++++F + + +G + A I+ F Sbjct: 13 LTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQWLKRFLPH--GV 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + L L+ + + + + +ELV+ V + R Sbjct: 71 AATVVFMVGLLLLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQ------------ 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYR 179 + + + ++I I S G ++ + +I + + FF Sbjct: 119 --AEQMLAARDVQIDFGAIEAKFRDQVIESIGSSVGVIQGIVNNLIDLILVAVVSFFMLL 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I + L A + + + + F G ++A+ + + VP Sbjct: 177 DGGRIWKWLLRGLPK---ASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVP 233 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ I MIPG + +L+ ++ A + + + I + L P Sbjct: 234 VPLILAVVAGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPR 293 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++ +++ + FF L+ G R GL+GLF+ + ++ + K+S Sbjct: 294 VMQNSLQMNPVVLFFALLIGSRLAGLVGLFLSIPIAGVLLSLMDNDTEEDDNEFSKVS 351 >gi|254391817|ref|ZP_05007012.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|326443835|ref|ZP_08218569.1| hypothetical protein SclaA2_22348 [Streptomyces clavuligerus ATCC 27064] gi|197705499|gb|EDY51311.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 397 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 103/320 (32%), Gaps = 14/320 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A I P + ++ + ++ + ++ L ++ +V Sbjct: 47 AFFIALAIEPAVARMAAR-GVRRGLATFLVFFGLLSAAVGFVVMLGSMLADQIVTMVEDF 105 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q+ V W++ + +EL + +++++ + + A+ Sbjct: 106 P---QYLDSVISWINQ----TFETELSRVEVQDSVLRSDWLQSYVEDSATGVLDVSATVL 158 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G +F + + F+F DG + + + S+ A + I Sbjct: 159 GGLFRLLTIFLF-----SFYFAADGPRLRRTICSVLPPAKQAEVLRAWEIAVDKTGGYIY 213 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 ++A+ G + GVP AL V +++ IP A+ + + N Sbjct: 214 SRGLMALISGGAHYVLLEVLGVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNP 273 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + + + L+P L + + F ++ G MG +G I + Sbjct: 274 WYAVWVLGFVVVYQQFENYVLQPKLTARTVDIHPAVAFGSVIAGTALMGAVGALIAIPAV 333 Query: 336 ALIAVIWKESIMAIKENKEK 355 A + + + Sbjct: 334 ATLQAFLGAYVRRYDVTDDP 353 >gi|220931418|ref|YP_002508326.1| predicted permease [Halothermothrix orenii H 168] gi|219992728|gb|ACL69331.1| predicted permease [Halothermothrix orenii H 168] Length = 351 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 122/339 (35%), Gaps = 15/339 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ I+ + +K P + + + P+ + + + L Sbjct: 15 LLVLGGIIYFILLIKKVLLPFVFGTFLAYLFNPLITFLRKRNISR-----------ITAL 63 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +I+ L+ L + + + L + + + +P++++ + + + + P+ + Sbjct: 64 YILILVVLILFISISIFILPIFIRELEELTVTLPKYVNSLEKYVEYVNREYRRIHLPEVI 123 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSISQQLDS 190 K + + L +FI F ++ Y +S+ I ++ +D I + Sbjct: 124 KEVIDQAL-AKLENFILNFIENLTTSVINSLTYIVSLFISPIITYYILKDYEEIQSSFLN 182 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K R + K+ G ++I G+ L V ++ LG++ I Sbjct: 183 IVPKKYRKPVLKSGREISKIFVGFLRGQIWVSIIVGVFSTLGLMLFKVKFYLLLGILAGI 242 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 MIP P+ ++ + + A + + ++ + + P + + L L Sbjct: 243 TNMIPYFGPVIGAIPAVMIAFLSSPVKAFGVIILFSLIQQVESSIIGPKIFSNRVGLHPL 302 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ G GL + + VI+K I I Sbjct: 303 TIIFVLLAGADIFDGWGLIFAVPVAGSLKVIFKIFIEQI 341 >gi|308174808|ref|YP_003921513.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|307607672|emb|CBI44043.1| putative integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|328554762|gb|AEB25254.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208] gi|328913116|gb|AEB64712.1| putative integral inner membrane protein [Bacillus amyloliquefaciens LL3] Length = 386 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 116/333 (34%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK PV+ I+ + PI + K + ++ + ++ L + Sbjct: 42 FIFTPIIVLLKTIALPVILTGIVYYLLNPIVD-ILEKLRVKRVYSILLLYLIIIGLISIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + V + G + ++ + L Sbjct: 101 IVSIIPFLKEQIMSLIDNLPKYVDI---VEDQTKSLIGSDFVNQAQKTMNINISDLANKV 157 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + G + + +SI+ + LF+ +DG + + Sbjct: 158 SAQAATIANSTFTGVGNFIGALT-EVIISIVTVPFILFYLLKDGKKLPFYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTMLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSVVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + + K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPLMLLKLAIVWTVVQLVEGKLISPQIMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+I V+ K Sbjct: 337 TAGKLFGVVGIILAIPGYAVIKVVTTHLFDWFK 369 >gi|119486999|ref|ZP_01620871.1| hypothetical protein L8106_18821 [Lyngbya sp. PCC 8106] gi|119455928|gb|EAW37062.1| hypothetical protein L8106_18821 [Lyngbya sp. PCC 8106] Length = 376 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 124/336 (36%), Gaps = 11/336 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ ++ ++++ + P+ +++ ++ ++++ L + Sbjct: 35 WQLQSLIVLLMISVVLAASIVPLVDWAEAQRIPR-WLAVILVYLTLIAGLTGFGLVIGPR 93 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ LV ++ L ++ + + L+ E + + ++ ++++ Sbjct: 94 VFDQISLLVRQLPLFSERIVDIASALAS-----RLGEDTPALIEDLIDTQSVTNWIIRSS 148 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + S+I + + D ++ + L L + + Sbjct: 149 QQLLLRSY--SITRGIVGGVFSLIIALFVSGYMVADSNTLIKSLVQLFPYPWNERLNAQV 206 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPIS-F 262 V + + G +++ G+ G+ + LG I + +IP PI Sbjct: 207 SQVSRRMGGYIRGRLLVSGILGVATTMGLGFLGLREFALGLGAIAGVTNLIPFLGPILGA 266 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I L KG L L+ I + L P LVG + + L ++GGV+ Sbjct: 267 IPALIVALAKGGFLFFWVLLLY-VIAQNVETYVLDPLLVGTSVGVHPLFQLLSVLGGVQV 325 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+LG I P A +A + + + KE +E++ Sbjct: 326 LGILGALIVPPWFAGVAALVENLYLKPKEEQEQLKK 361 >gi|170727235|ref|YP_001761261.1| hypothetical protein Swoo_2891 [Shewanella woodyi ATCC 51908] gi|169812582|gb|ACA87166.1| protein of unknown function UPF0118 [Shewanella woodyi ATCC 51908] Length = 394 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 108/335 (32%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ + + LAV+ + Sbjct: 12 KGFAIMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPVIGWLTKLRVPRA--LAVLFLM 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + + E + + W Sbjct: 70 VFIVMMGLWLAQVVGSSINEFSSQLPQYRDQLVDQFG-----------------WVIEKL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ I E L + ++ +I+ + F + ++ ++L Sbjct: 113 RTFNIIITKEQVLAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFMLFESETLPKKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + + T+++IG G+++G + GV + GV+ Sbjct: 173 HFALDD--PDMRMQQIDKFLQSVNQYMVIKTLVSIGTGVIVGVGLAIIGVDYALLWGVVA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGATGLLYLGTNTVMGNVIEPKYMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L F L+ +G +G+ + P+ M + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIAL 325 >gi|322370756|ref|ZP_08045312.1| permease [Haladaptatus paucihalophilus DX253] gi|320549714|gb|EFW91372.1| permease [Haladaptatus paucihalophilus DX253] Length = 399 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 124/352 (35%), Gaps = 31/352 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + LV+ + F V+ + + + PIY + A+ + + Sbjct: 19 VFVLLLALVAGFVTYSFVGLVVLGVFGYYATRPIYRRLRVITDSDGVIAALT-----LLV 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +P++ L +Y ++ + + + V +L +P L + PQ Sbjct: 74 VFLPIVLLTFYAGFQLFQQAQQAFGGTANSTLVTNYLGALPKAQQERVL--AAMQQPQQF 131 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++T + ++ G I L I + +FF ++ +S L L Sbjct: 132 VSNPQKTVQTVLHSGLRVTSAVIGGIML-----IALSVTLAYFFLKNDDQLSSGLTQLFG 186 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL--------AGVPSHVALG 245 + V + + S F G + + L+ +AYW VP L Sbjct: 187 G-KDTTAYAYAVAVDEDLESVFFGNLLFIVVMSLIAAAAYWGTNVVAPGDLHVPMVFVLA 245 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNA-------TCLFLWGAIELFIVDKTLR 297 +T + ++IP + + V YL I+ L ++ + + L+ Sbjct: 246 FLTGVASLIPIVVGKLVYLPVVGYLGIQAVNAGGDYLVFVGGVLVVYFLLLDTLPQTFLQ 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P++ G + + + F + G G G F+ P+L L+ + + + Sbjct: 306 PYITGRQLDM--VMMMFAYLLGPILFGWYGFFLLPILFILMLEAVRIVLPEL 355 >gi|75760499|ref|ZP_00740536.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491999|gb|EAO55178.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 215 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 73/191 (38%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L + + + +F+ ++DG + + SL + +I + + + + G ++ I Sbjct: 23 LVVFTVPVIVFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIF 82 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G Y + +P LG+I A +IP P A ++ + + + A + + Sbjct: 83 VGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIII 142 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I + P ++ + + L ++G G++G+ + + A+ + Sbjct: 143 VTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSN 202 Query: 345 SIMAIKENKEK 355 + K + Sbjct: 203 LVRLFKTKRSN 213 >gi|168204285|ref|ZP_02630290.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|169342966|ref|ZP_02863994.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169298875|gb|EDS80949.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|170664060|gb|EDT16743.1| putative membrane protein [Clostridium perfringens E str. JGS1987] Length = 377 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 114/333 (34%), Gaps = 8/333 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMC 72 I+ LY G P + + I F S +F + + + Sbjct: 31 IMNFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + +Q + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ LS+I I L + + + Sbjct: 151 KEILKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ ++ ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGKMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|222480504|ref|YP_002566741.1| hypothetical protein Hlac_2094 [Halorubrum lacusprofundi ATCC 49239] gi|222453406|gb|ACM57671.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC 49239] Length = 348 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 112/344 (32%), Gaps = 43/344 (12%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I V + L F ++ + + + + PIY E A + ++V ++ Sbjct: 19 VLITAVVAFVLYSFVGAIVVGIFLYYATRPIYRWIDQWT-EHPDLSATVTLLTVGLPILL 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + G+ E+ + + L E L L Sbjct: 78 ILAYATFVGIREIDQFFAIANL----------------------EQLRTVLEPYVDLVSG 115 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 SE + A F + L + F+ RD + I+Q EH Sbjct: 116 SEEQGLFGILRDNVSRARGFASSATVWLLRLFVSFTLAFYLLRDDYKIAQWFRRSFEH-- 173 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--------GVPSHVALGVIT 248 V + + + G I GL+ S Y++ GV LG++T Sbjct: 174 QPAAVTFVEQVDADLTTIYTGNLITIGASGLLAVSTYYVLDIIAPAGTGVQFPFLLGLLT 233 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIK-------GNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +IP G + + + YL+ + F + + I D +R ++ Sbjct: 234 GVATLIPAIGMKLIYYPYTGYLVWQVVSKGEGSLWFPVVFFLVTVVVVDVIPDFFIRSYV 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G +L V GV G G+F P+++ + ++ Sbjct: 294 SKG--ELNMGLLLLTYVLGVVAFGWYGVFFAPIVLVVFIHFVRD 335 >gi|313672439|ref|YP_004050550.1| hypothetical protein Calni_0474 [Calditerrivibrio nitroreducens DSM 19672] gi|312939195|gb|ADR18387.1| protein of unknown function UPF0118 [Calditerrivibrio nitroreducens DSM 19672] Length = 356 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 10/333 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++F++++ L+ A +I + P+ K + F ++ + + Sbjct: 17 LLFLLVIFYVKLQSVINMFAIAFLISYLLIPLVHFVEDKLKIGRVFSVILIFSVFSGMVV 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L+ + E+ L + I ++DI T S Sbjct: 77 LFLIIVIPLLYAEIFNLFKNLSSYAVIFI---EKINDIFKKYNYQLDLTALKQLMLSKLN 133 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L ++ + + L + I +F+F +D I ++ S + Sbjct: 134 EHGSELFKGSLNILTSIITSIST-----LLGFFVIPILVFYFLKDFEFIFKKGVSFIKTR 188 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ F G ++ G++ G L G+ A+G I+ +++ IP Sbjct: 189 LRIDIDYYNYQFNSILKGYFRGQLMVCFILGILYGVVDLLVGIKGGFAIGFISGLLSFIP 248 Query: 256 GGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I+ +++ I L G+I + + + + L P LVG + L + Sbjct: 249 YLGFITGFVSSIIISYLQFGDILHPLLVVVGFMLVQSFESYFLTPKLVGEHLGLHPIAVI 308 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F L G MG+ G+ + L A I ++ + + Sbjct: 309 FALFAGGYLMGIGGMILSIPLAAFIKIVINKFL 341 >gi|258654182|ref|YP_003203338.1| hypothetical protein Namu_4059 [Nakamurella multipartita DSM 44233] gi|258557407|gb|ACV80349.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 409 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 110/314 (35%), Gaps = 21/314 (6%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ ++ + P+ AL++ T P+ I + + +LA + V + I Sbjct: 64 VVVAAGIHAVPDLIGPIFLALVLTITVDPLRGMMIRR--GAPRWLATLVVVIGVYAIIFG 121 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L+ G+ + L+ + Q + + L+ + Sbjct: 122 LVIAAAVGVAQFVGLMPQYADQLQTELTGVK----------------SWLAGMGVTQEQI 165 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++ L + I + + ++ S+ F+I L F DG S+++ P Sbjct: 166 QSMLSSVDKSSILSYIASLLSSVMNVFTSLFFIITLLIFLAVDGSVFSERMVKHRPGREP 225 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 A R F TI ++ G+A + G+P+ ++ + IP Sbjct: 226 AL--NALGQFAAGTRKYFAVATIFGGIVAVLDGAALVIMGIPAAGLWALLAFVTNYIPNI 283 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I ++ L+ G + + + FI+ L+P VG + L +F L Sbjct: 284 GFIIGLIPPALLGLLVGGPSLMIWVIVVYCVLNFIIQSVLQPKFVGDAVGLTTTMSFLSL 343 Query: 317 VGGVRTMGLLGLFI 330 + +G LG + Sbjct: 344 ILWAFLLGPLGAIL 357 >gi|322376424|ref|ZP_08050917.1| membrane protein [Streptococcus sp. M334] gi|321282231|gb|EFX59238.1| membrane protein [Streptococcus sp. M334] Length = 369 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + + P S + + ++ +++ ++ +++L + ++ Sbjct: 42 MIPFLLGSFLYYLTNPFVSFLQKYFKINRIIGILLTLCALVWGLVIGVVYLLPILVNQLT 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L++ + LS P + LS + N ++ + Sbjct: 102 SLIATSQTIYSRLQDLIVDLSTYPAFQNLD------IQANIQQLNLSYVDILQNILNSVT 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L II + L +F DG L+ + + + + Sbjct: 156 NSVGSILSALFSTVLIIIMTPVFLVYFLLDGHKFLPMLERTVLKRDKLHIAGLLKNLNAT 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G+ I AI G + Y + G+ + + + + +IP P I Sbjct: 216 IARYISGVAIDAIIIGCLTFIGYSVIGLKYALVFAIFSGLANLIPYVGPSIGLIPMIIAN 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + ++ I + L P +VGG +K+ + L+ G++G+ + Sbjct: 276 VFTDPHRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLLSSNIYGVIGMIV 335 Query: 331 GPVLMALIAVI 341 +++ I Sbjct: 336 AVPTYSILKEI 346 >gi|317499359|ref|ZP_07957627.1| ATP synthase F0 [Lachnospiraceae bacterium 5_1_63FAA] gi|316893328|gb|EFV15542.1| ATP synthase F0 [Lachnospiraceae bacterium 5_1_63FAA] Length = 375 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 107/327 (32%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL-FLFYY 84 + F A II K ++ L++I + + I+ + + Sbjct: 41 VVFPFILGSCVAFIINVPMSFFERKLFYKLKKGKRSLSLIMAIVSIVGVILLVSRLIIPE 100 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + +L + + + + + + + TFL+ Sbjct: 101 LVDTIFKLSNNIPEYVKEIQALLE--KTSMNKPMVHKYVNQITFDWDKISGELITFLQDG 158 Query: 145 GIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + S + + L +F + AL + + + L + Y Sbjct: 159 ATSMLNSTVSAITDVVQFIVSFALGFVFALNALLQKEKLSMQVKKVLVAFLPERVAKYIV 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ R+ S G + A+ G ++ ++ L G+P V + V +M++IP Sbjct: 219 RVGRLSNNAFSSFLSGQCLEAVILGCLIFASMKLLGLPYAVLIAVFIGVMSLIPIIGGFI 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V + L+ + A + + + P +VG + LP + + G Sbjct: 279 GCWVGVLLIFMVDWKQAIIFIIMFVVVQQFEGNVIYPHVVGNSVGLPAIWVLVAVTIGGN 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 G++G+ +++ ++ E + Sbjct: 339 IAGIVGMIFSIPFCSVLYQLFSEIVNK 365 >gi|54310026|ref|YP_131046.1| putative permease PerM [Photobacterium profundum SS9] gi|46914465|emb|CAG21244.1| putative permease PerM [Photobacterium profundum SS9] Length = 356 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 117/349 (33%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + + T ++ Sbjct: 15 DPHAVSLIAILLGGFLTIYFFGNLIAPLLVAIVLAYLLEWPVMR--LERLGLPRTVAVLV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L ++ L ++ S V + ++S +P + Sbjct: 73 VLLIFAGLMVMAFFGLVPTIWHQVGNFASDVPTMFN---DLQHYVSSLPERYPDFVQPHQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ ++L+ ++ + S + +I + + +FF +D + Sbjct: 130 AITFMETLREKVMGLGESVVKGSLASLVS-----LATIAVYLILVPLLVFFLLKDKDEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G G+ + + + V L Sbjct: 185 ATMSGILPK-NRRLTSKVGAEMNEQISNYIRGKVTEIFIIGIASYITFAVMDLRYAVLLS 243 Query: 246 VITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA V+ + L G + L + + L P L Sbjct: 244 VLVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPDFWWLLAAYGVIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +W + ++ Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALPSSEPDD 352 >gi|88706616|ref|ZP_01104319.1| conserved hypothetical protein, membrane (DUF20) [Congregibacter litoralis KT71] gi|88699112|gb|EAQ96228.1| conserved hypothetical protein, membrane (DUF20) [Congregibacter litoralis KT71] Length = 383 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 116/324 (35%), Gaps = 17/324 (5%) Query: 11 IMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + RW ++F + + Y L+ P + + G+ P+ + S TF ++ Sbjct: 16 VNRWPLVFAVFAAMAVLFYILEPILLPFVLGALTGYLGDPLVDRVEER-GGSRTFGVILV 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L +V L F + ++ L+ ++ + WL D+ S Sbjct: 75 FLFFTTLSLVALFFAVPVLLQQLDGLIGRI-------PVLYAWLRDVAVPWLQSRTLVTG 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGFS 183 + PQ + SR L L +I + + F+ RD Sbjct: 128 ANLPQIDWSAQLLENWQSLGKVTATTISRITGSGLGLLLGMANIALVPVVAFYLMRDWDD 187 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I++++ L + A +++ R +V+ + G I+ G + + +LAG+ + Sbjct: 188 IAERILHLMPKAWQAGTQQMVREADEVVGAFLRGQFIVMCALGALYAAGLYLAGIELALL 247 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG+I + +++P I S+ + + I L P LV Sbjct: 248 LGLIAGLASIVPYLGFIVGITASLIAAWLQFHEPLPLLYVAAVFGVGQLIESMVLTPVLV 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGL 325 G I L + F L+ G + G Sbjct: 308 GDRIGLHPVMVIFALMAGGQLAGF 331 >gi|167040126|ref|YP_001663111.1| hypothetical protein Teth514_1488 [Thermoanaerobacter sp. X514] gi|307724555|ref|YP_003904306.1| hypothetical protein Thet_1415 [Thermoanaerobacter sp. X513] gi|166854366|gb|ABY92775.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X514] gi|307581616|gb|ADN55015.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X513] Length = 341 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 126/349 (36%), Gaps = 20/349 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKEESS 59 I + ++F+I+ + L F +P + +I + P+ K S Sbjct: 2 QIKKTYLLFLIIGATGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPM-----VKFFNSK 56 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F ++ + V + +LF +Y + L+++ + Q + + + Sbjct: 57 GFSISLSILLVFLIVASGILFFSFYIV---PLLINEFIALLQMIPFYAEEIQKLLIQLKF 113 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L +L + N + A + + L + II + I F+F + Sbjct: 114 NYL--SYLPPQVEKVLDKNLGSLNNAFTYHIDSAFKSVITILKDAVDIIIIPIVTFYFLK 171 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++++ + + + I + + K++ I+ + L V Sbjct: 172 DKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLIKVK 231 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ I+ +IP PI ++ + + ++ + + + + + P Sbjct: 232 YAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFITPK 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A+I I E + Sbjct: 292 IMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIEIFIE 340 >gi|18309525|ref|NP_561459.1| permease [Clostridium perfringens str. 13] gi|18144202|dbj|BAB80249.1| probable permease [Clostridium perfringens str. 13] Length = 377 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 113/333 (33%), Gaps = 8/333 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMC 72 I+ LY G P + + I F S +F + + + Sbjct: 31 IINFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + +Q + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ LS+I I L + + + Sbjct: 151 KEILKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|282165362|ref|YP_003357747.1| hypothetical protein MCP_2692 [Methanocella paludicola SANAE] gi|282157676|dbj|BAI62764.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 380 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 139/369 (37%), Gaps = 29/369 (7%) Query: 12 MRWMI--MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+I ++L+ L+ + F ++ A+ I + + PI + + T L + + Sbjct: 11 AKWLIFGAALVLLLLWVMWPFLTVIVYAVFIYYIARPIKRMLQPHIK-NETLLVTVCMLL 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV---PRWLSDIPGGMWASELWTKH 126 ++ ++ + + + + L++ + L + P+ +S+I + + + Sbjct: 70 LVLPLLLIIGYTLLLALSQFNALITGIGLQSLPEGPLSNMSNVVSEIQRNFTMENIMSGN 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + I + + G +D + +I+ +F+ R+ + Sbjct: 130 FGAIVPQDLYEALQGYGSSIANLQQLVISTGSTIVDIIFKLFLVIVIVFYMLREDEKLVS 189 Query: 187 QLDSLGEHLFPAYWK---KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG------ 237 L S L Y K R V + + F G + + ++ + + + Sbjct: 190 WLKSTFPSLMAEYDGMLLKYGRAVDEDLEKIFFGNILSIVFFAILAATVFSVLNMFAPPG 249 Query: 238 --VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC---------LFLWG 285 +PS + +G++ + A++P G I + +Y+L+ + + Sbjct: 250 MSIPSPILMGILCGVSALLPVVGMYIVIVPLLLYVLVISLMAGTFFPNIVFYIMMVAAIM 309 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + D LRPF+ ++ F + G G+ GLFIG +++ L+ ++ Sbjct: 310 IFVEVLPDFVLRPFM--SSGRVHTGLLMFAYILGPIVFGIAGLFIGAIVLVLLTHYFRIV 367 Query: 346 IMAIKENKE 354 + AI E Sbjct: 368 VPAISRESE 376 >gi|307152495|ref|YP_003887879.1| hypothetical protein Cyan7822_2636 [Cyanothece sp. PCC 7822] gi|306982723|gb|ADN14604.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 370 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 109/311 (35%), Gaps = 13/311 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + +L+A ++ F Y+ K AV + +FI+ + L +++ + Sbjct: 36 ISILLTAALMAFLLN--YAVMALKLILPRPIAAVFVYLGAALIFIIVGVTLLPPVVIQGR 93 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L+ + G S + + + G+ + Sbjct: 94 QLLIGLPELIAQGQQQLNTFQAWSVDHNLPFDLQLITSDLFNRIQTQARIIASTGLGLVL 153 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ L +I +++ F+ DG + L S P +++ + K Sbjct: 154 --------GTFNWFLDVILILVISFYMLIDGERLWDGLTSF---FSPKIQDQLTISLEKN 202 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 ++ G I+ + + L A+ L P + V +M ++P + + +L Sbjct: 203 LQRFVTGQLILGLFMSVSLTVAFRLLNTPYFLLFAVFIGLMELLPFIGATLGIGIVVIIL 262 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 N + A + + I I D + P ++G L + F L+ G + G LG+ + Sbjct: 263 AFINWWLAVKVLIVSVIIQQIKDNLISPRIMGNLTGLSPVIIFMALLLGAKIGGFLGVIL 322 Query: 331 GPVLMALIAVI 341 L ++ + Sbjct: 323 AIPLTGVVKGL 333 >gi|254414198|ref|ZP_05027965.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196178873|gb|EDX73870.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 370 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 119/324 (36%), Gaps = 10/324 (3%) Query: 38 LIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 +++ T PI +S ++ + ++ + + + + +++ L ++ Sbjct: 40 VVLAATLAPIINSAQQ-LGIPRWLAVLLVYLGLLTILVGVGVLIGPTVAQQIQRLFRRLP 98 Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + + + + + SE + Q+L + + + Sbjct: 99 DYLE---VLESLIDRLAVRLGISEPIISQIFDTQTLTNWA-----IRSSQQLVVRSYGVT 150 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 FL LS+I + + + + + SL + + V + + + G Sbjct: 151 RGFLGGILSVILALFLSGYMLSGAKRLIKGIVSLFPKPWDDRLAAQVKPVSRRMGNYIQG 210 Query: 218 MTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 +++ G+ + + G+ + LGVI +IP P+ ++ + I + Sbjct: 211 RVLVSGILGVAITIGLKVLGITEFALGLGVIAGGTNLIPFFGPVLGAIPALIVAIAQGGW 270 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 +FL I + L P LVG +++ L +VGG + +G++G I P +A Sbjct: 271 TFLWVFLLFVIIQNVETYVLDPLLVGSSVRVHPLYQLLAVVGGAQVLGIIGALIVPPWIA 330 Query: 337 LIAVIWKESIMAIKENKEKISSNF 360 +V+ + + K E+ ++ Sbjct: 331 GASVLLENLYLQPKRQAEQQAAAL 354 >gi|313205129|ref|YP_004043786.1| hypothetical protein Palpr_2671 [Paludibacter propionicigenes WB4] gi|312444445|gb|ADQ80801.1| protein of unknown function UPF0118 [Paludibacter propionicigenes WB4] Length = 361 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 134/330 (40%), Gaps = 16/330 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +L LY +G P++ A II P+ +S + +A+I T+ +M L IV Sbjct: 21 LSALLAILYIAQGIIVPLVFAFIIAILLHPVVKFLVSIRINR--IMAIIITLLLMALIIV 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L Y + + S +L + + + + S+ + + + Sbjct: 79 AFIALIYKEAVSFSD--SWPLLVKKFTAILDDTIQ------YTSQYFNIRPALIHTWITK 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ L T I + G L +++ + L++ + + + L + Sbjct: 131 TQHELVTINSTLIGQTLVTVGSSVATMLLVPVYIFVILYY----QPLLIEFVHRLFDEAH 186 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + I+ VI+ LG+ I AI G++ L G+ + LGV+ A++ +IP Sbjct: 187 QNQVRSITTKTKSVIQHYLLGLIIEAIIVGILNTVGLLLLGIQYAILLGVLGALLNLIPY 246 Query: 257 GAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I + + L+ K + + A +F I + + P +V +K+ L + Sbjct: 247 IGGIIAVGLFMMVALVTKESSWFALYVFGVHTFIQIIDNDYIVPKIVASKVKINALFSIV 306 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G G+ G+F+ L+A++ VI+ Sbjct: 307 VVLVGNALWGVPGMFLSLPLLAIVKVIFDH 336 >gi|168210323|ref|ZP_02635948.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|168214514|ref|ZP_02640139.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|182626553|ref|ZP_02954301.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|170711626|gb|EDT23808.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170714004|gb|EDT26186.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|177908141|gb|EDT70707.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 366 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 4/336 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSE 138 +L + EL+ + V ++I E +L H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTN---YVQNLFTEIMASFKVPEGINSYLPHGDTNKLITFI 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + T +++ A +++ + I L + S+ + Sbjct: 151 GSMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKDLGN 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +I+ + I + I ++ G++ + + L V+ I MIP Sbjct: 211 EILEFIKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V ++ + + A + ++ I L P L+G + L G+ Sbjct: 271 PFIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTL 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G +G+ +G +M++I + + I + E Sbjct: 331 GGAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|325680866|ref|ZP_08160404.1| putative membrane protein [Ruminococcus albus 8] gi|324107646|gb|EGC01924.1| putative membrane protein [Ruminococcus albus 8] Length = 439 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 104/337 (30%), Gaps = 19/337 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVSVMCLFIVPLLFLF 82 PV L+I F + PI + + F+ +I+ + LF+ + L Sbjct: 49 PVTWGLVIAFLTNPIMEKTSALLRKFYKTDEQRTKRKGFIKIISVIITELLFLGVMTGLV 108 Query: 83 YYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ + V ++ V +W++ + E + + + Sbjct: 109 AIVVPELIKSVMEIFDNTGSIVASVQKWINKFLRNYPSLEQAATKWLSDFNTDLGTIYDN 168 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 ++ I A + ++ L +I + + + Q+ + + Sbjct: 169 VKPMLENILTGAWGVVTVVKNFLLGLIVSV----YMLCSKEKLLAQIKKIIISITKKRTC 224 Query: 202 KIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + V G I + GL+ + G+P + V+ + +IP Sbjct: 225 QKIMSVCSQANTVFSGFITGKLIDSTIIGLICFIGLTIMGMPYSTMISVLIGVTNIIPFF 284 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + L++ ++ + L P ++G LP L+ Sbjct: 285 GPLIGAVPTSLLILLLEPKKCIIFVIFIIVLQQFDGNILGPKILGDSTGLPGFWVLISLL 344 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ + AL + S+ K Sbjct: 345 VFGGLFGFVGMVMAVPTSALAYSFLRSSVEEKLRRKN 381 >gi|319775891|ref|YP_004138379.1| putative permease PerM [Haemophilus influenzae F3047] gi|319896573|ref|YP_004134766.1| permease perm homolog [Haemophilus influenzae F3031] gi|329123740|ref|ZP_08252300.1| PerM family permease [Haemophilus aegyptius ATCC 11116] gi|317432075|emb|CBY80425.1| putative permease PerM homolog [Haemophilus influenzae F3031] gi|317450482|emb|CBY86699.1| Putative permease PerM homolog [Haemophilus influenzae F3047] gi|327469939|gb|EGF15404.1| PerM family permease [Haemophilus aegyptius ATCC 11116] Length = 349 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 117/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEMPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L + L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAIFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPKNYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + +K + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFK-VWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|240141033|ref|YP_002965513.1| putative membrane transport protein [Methylobacterium extorquens AM1] gi|240011010|gb|ACS42236.1| putative membrane transport protein [Methylobacterium extorquens AM1] Length = 652 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 107/368 (29%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WA 119 + ++ ++ L + E +L + + + L Sbjct: 71 AVLLVVVLAFGL-----LGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF---------------------IPRFASRFGM 158 S+ ++ + + + + + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTKSETNAPLGTAERPMQVEIHAPRTGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|229815777|ref|ZP_04446102.1| hypothetical protein COLINT_02826 [Collinsella intestinalis DSM 13280] gi|229808693|gb|EEP44470.1| hypothetical protein COLINT_02826 [Collinsella intestinalis DSM 13280] Length = 387 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 103/303 (33%), Gaps = 4/303 (1%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + +K + V++ V V+ + + E+ V +P Sbjct: 69 LVERLPEEKRPQPGLVTVVSIVLVLIAIAGVAVMAVTMLVPELIASARTVAPLLAERLPE 128 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + G + + + + L G+ I + S Sbjct: 129 IERVLAAEGVDVDKLMAWLQPAAGSASRSQGLQGLMNFGLGSIATSVFAAARSTVSVVSS 188 Query: 167 IIFMIIALFFFYRD----GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 +F + + G +++ +D+ + + ++ + G + A Sbjct: 189 TVFAFVIAVYVLASKRVLGRQVNRMMDAHLAPRHASRIRHVAALATDTYSKFLSGQCLEA 248 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 G ++ A+ L +P +G +TA+ A +P + A+ +L + + A Sbjct: 249 CILGTLIFIAFSLFRLPYAGLIGFLTAVFAFVPYVGAFASCAIGAFLTLLASPGQAIICV 308 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + F+ ++ + P +VG + L L T + G + G++G+ ++A++ + Sbjct: 309 IVYLAVQFVENQFIYPHVVGSSVGLSALWTLIAALVGGKLFGIVGIVFFIPIVAVLYELV 368 Query: 343 KES 345 ++ Sbjct: 369 RQW 371 >gi|110798580|ref|YP_694976.1| hypothetical protein CPF_0522 [Clostridium perfringens ATCC 13124] gi|110673227|gb|ABG82214.1| putative membrane protein [Clostridium perfringens ATCC 13124] Length = 377 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 112/333 (33%), Gaps = 8/333 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIATVSVMC 72 I+ LY G P + + I F +F + + + Sbjct: 31 IMNFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNGKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + +Q + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ LS+I I L + + + Sbjct: 151 KEILKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|255282958|ref|ZP_05347513.1| membrane protein Lmo0908 [Bryantella formatexigens DSM 14469] gi|255266497|gb|EET59702.1| membrane protein Lmo0908 [Bryantella formatexigens DSM 14469] Length = 409 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 116/338 (34%), Gaps = 20/338 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE---------SSTFLAVIATVSVMCLFIVPLLFL 81 P L +I F P+ I ++A + V+ + ++ +L++ Sbjct: 74 LMPFLLGTLIAFILNPLIKWLIKLLSGPCRIKSQKVCKFTAIILAYLLVLGVIVICILYI 133 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ + E+V+ + + L D SEL + F+ Sbjct: 134 VPQVVVSLTEIVANIPKLYEMTYDFFDNLQDRFPNADVSELQKIVDDILPDFVNTLKNFV 193 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + + +++ ++II + + D + + + + P + Sbjct: 194 -SGLIPAVYNMSVSIAKGLVNFVIAIIVSV----YMLTDKKDLKRSMKRILYCFVPVDYI 248 Query: 202 ----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 +I + + +G I + G++ + +P + + VI I MIP Sbjct: 249 PKTLEILSECNSIFTNFIVGKAIDSTIIGVLCFILMSIFSMPYALLISVIVGITNMIPYF 308 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I I LLI + A + + L P ++G + L L + Sbjct: 309 GPFIGAVPGVIILLII-DPLTALGFAVLIFLLQQFDGLYLGPKILGDTVGLKPLWIIISI 367 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G+LG+F+ ++A++ + + E + Sbjct: 368 TVGGSLAGVLGMFLSVPVVAVLRYLLNLYLEYRLEKRH 405 >gi|15900756|ref|NP_345360.1| hypothetical protein SP_0873 [Streptococcus pneumoniae TIGR4] gi|14972346|gb|AAK75000.1| membrane protein [Streptococcus pneumoniae TIGR4] Length = 369 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 107/316 (33%), Gaps = 6/316 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGGFFYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I I + ++ + + L P +VG +K+ + L+ G+ Sbjct: 271 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGV 330 Query: 326 LGLFIGPVLMALIAVI 341 +G+ + +++ I Sbjct: 331 VGMIVAVPTYSILKEI 346 >gi|254509168|ref|ZP_05121267.1| permease PerM [Vibrio parahaemolyticus 16] gi|219547919|gb|EED24945.1| permease PerM [Vibrio parahaemolyticus 16] Length = 356 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 122/348 (35%), Gaps = 14/348 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ +S+ T ++ Sbjct: 15 DPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSQ--LSRLGVPRTLAVIL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L +V + L ++ L++ + + + +++++P E + Sbjct: 73 VILGFSSLMLVAVFGLVPTIWQQVGNLINDIPTMY---VGLQSFIAELPHRYPELENFQI 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K + +T + S + +I + + +FF +D + Sbjct: 130 VESLVTNAKNQAIGMGETVVKGSLASLVS-----LATLAVYLILVPLLVFFLLKDKQEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 EMASGVLPR-NRRLANKVWHEMNEQISNYIRGKVMEILIVGGVSYVTFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+ + L G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L L+ +W +E Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHDEE 351 >gi|148656415|ref|YP_001276620.1| hypothetical protein RoseRS_2291 [Roseiflexus sp. RS-1] gi|148568525|gb|ABQ90670.1| protein of unknown function UPF0118 [Roseiflexus sp. RS-1] Length = 424 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 115/347 (33%), Gaps = 15/347 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++II L+ + P + L++ + P F + Sbjct: 53 ALALYIIGSMLWSTRPVLIPFVIGLVLAYLMAPAVDFFDRWMP--RWLAILAVYALGFLG 110 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----IPGGMWASELWTKHLSH 129 + + ++ L+ ++ ++ + V + +P + + + Sbjct: 111 IAATFALIIPPLVEQVARLIRQLPSFSEVQMFVDSVVKQYRDQVPPSLQ-QPIEDSLANL 169 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +SL+ +T+L+ G + + + L I + I LF+ D + Sbjct: 170 LRSLQNNIDTYLQRGGA--FLLNQLIQLLNTVTFILGFISLPIWLFYVLYDKQQGRVFFN 227 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW---LAGVP---SHVA 243 L A + + I+ V+ G I+ + GL +G + G P + Sbjct: 228 QLVHPRARADFWNVWEIINNVLGGYIRGQIILCVAVGLAVGIGLVGLEMLGFPLGDYVLV 287 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L +I + IP P + L + + + + + L P ++G Sbjct: 288 LALIAGVTEFIPVLGPTIGAIPGVILGFGISPTAGFAVLILYIAVQQLENSLLVPRIIGE 347 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + ++ GLLG+ + +A ++K + + ++ Sbjct: 348 SVGVHPAVLTVAMIVMGTLFGLLGILLAAPAVATTRDLFKYAYLRLE 394 >gi|68248846|ref|YP_247958.1| putative permease PerM-like protein [Haemophilus influenzae 86-028NP] gi|145632482|ref|ZP_01788216.1| lipoprotein NlpI [Haemophilus influenzae 3655] gi|145635144|ref|ZP_01790849.1| lipoprotein NlpI [Haemophilus influenzae PittAA] gi|229844941|ref|ZP_04465078.1| hypothetical protein CGSHi6P18H1_04272 [Haemophilus influenzae 6P18H1] gi|68057045|gb|AAX87298.1| putative permease PerM homolog [Haemophilus influenzae 86-028NP] gi|144986677|gb|EDJ93229.1| lipoprotein NlpI [Haemophilus influenzae 3655] gi|145267565|gb|EDK07564.1| lipoprotein NlpI [Haemophilus influenzae PittAA] gi|229812075|gb|EEP47767.1| hypothetical protein CGSHi6P18H1_04272 [Haemophilus influenzae 6P18H1] Length = 349 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 117/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEMPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPKNYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + +K + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFK-VWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|91789419|ref|YP_550371.1| hypothetical protein Bpro_3565 [Polaromonas sp. JS666] gi|91698644|gb|ABE45473.1| protein of unknown function UPF0118 [Polaromonas sp. JS666] Length = 356 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 125/345 (36%), Gaps = 11/345 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ T +I + +V+L+ L P + A ++ + P+ + S + Sbjct: 1 MQFTHTQKSVAAWCLIAALAVVALWLLGPVLTPFVVAAVLAYALTPLVNRLDSLGKGRLP 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + V + + ++ LFL + +++K + + +P+ + W + Sbjct: 61 RVVAVLLVEFLFIVVLLGLFLL------IVPIMAKELPLLREQVPLLADRLNTELAPWLA 114 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFF 177 + + S+K +L N D S G + L + + + +ALF+ Sbjct: 115 KFGFRVSLDVASIKAFVLKYLNANFEDVFGSLLSSLKLGGSVALAIMGNAVLIPVALFYL 174 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D S + L + + V+ G ++ + + + L G Sbjct: 175 LMDWNSFVARALELVPPRLREGFDSFTSEADSVLGQYLRGQLLVMLIMAVFYATGLALFG 234 Query: 238 VPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + V +GV T + IP G A+ +L ++ + + + I Sbjct: 235 LDLAVPIGVFTGLAMFIPYLGFGLGLVLAMLAGVLEFASLKALVMVAVVYGLGQVIESLY 294 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L P LVG I L L F L+ + G +G+ + + A++ V Sbjct: 295 LTPRLVGERIGLHPLAVIFALLAFGQMFGFVGVLVALPVSAVLLV 339 >gi|225010757|ref|ZP_03701226.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-3C] gi|225005128|gb|EEG43081.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-3C] Length = 362 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 127/360 (35%), Gaps = 21/360 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEE 57 M +++ + I+ IL LYFL ++ A I+ PI +K Sbjct: 1 MNAKIISSGILRALAIVVAILAGLYFLNAITTVLVYIVIAAIVSLIGRPIALFLKNKLRF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + T A+ ++ + + + + + + + L + + I G+ Sbjct: 61 NRTIAAISTMAILLGILSMLIALVVPLLVQQGENLSLLNIKGLKSSITDLYAEITAYFGL 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L+ + + + T ++ +P F + + ++ + + FFF Sbjct: 121 ENNSLFAQFQD---------SSLITTLSLEQLPAFFNAVLGLLGNFGAGLFSVAFISFFF 171 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + K+ + ++ FLG+ + ++ + Sbjct: 172 LKDSELFENGILMWVPSKENLKTKEAFAKIKSLLSRYFLGLLFQILILFVIYSIVLSVFS 231 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--------TCLFLWGAIEL 289 VP+ + + + A++ +IP PI + ++L + + + T + G I Sbjct: 232 VPNAMVIAFLCALLNLIPYVGPIVGGMLMMFLTMSSQLGASFNEIILPKTTYVMIGFIIG 291 Query: 290 FIVDKTL-RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +VD L +P + +K L F ++ G G+ G+ + L I V+ K Sbjct: 292 QLVDNFLSQPLIFSKSVKSHPLEIFLIILCGGLLWGVTGMVVAIPLYTAIKVVLKVFFTE 351 >gi|15602996|ref|NP_246068.1| hypothetical protein PM1131 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721477|gb|AAK03215.1| PerM [Pasteurella multocida subsp. multocida str. Pm70] Length = 354 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 117/350 (33%), Gaps = 13/350 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + + I+ +S+YF AP+L A+++ + WPI K + I Sbjct: 15 DPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPI-RVLTEKLKFPRLLSTAI 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L +V +L + LV+ + + WL +P + Sbjct: 74 IFGGFLGLILVIVLVFIPTLWTQTLNLVTDLPHMFNK---LNEWLLSLPEHYPELVDYQT 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ F ++ + S + + + ++ FF +D + Sbjct: 131 IDSVLSTVRSKILGFGESALKFSLTSLLSLVTLGIYAFLVPLMV-----FFLLKDKTELI 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + I + G I V + + + + L Sbjct: 186 ASVSRFLPR-NRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYSLLLA 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V + ++P GA + +++ + + I + + I+D L PFL Sbjct: 245 VAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L L ++ G G+F L L+ + ++ + Sbjct: 305 AVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR 354 >gi|118466956|ref|YP_884090.1| hypothetical protein MAV_4969 [Mycobacterium avium 104] gi|118168243|gb|ABK69140.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 382 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 98/290 (33%), Gaps = 15/290 (5%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + + L F+ + + L +V + + RWL Sbjct: 64 WLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTR---RWL 120 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P + + ++ + + ++L + A + + + + Sbjct: 121 INGPAHLRSEQIDSAGNAAIEALHNNQAK---------LTSGALSTAATVTELVTAAVLV 171 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L FF G +I + + + + + ++A+ + +G Sbjct: 172 LFTLIFFLYGGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVG 231 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + G+P + L + + A IP + F AV + LL KG I A Sbjct: 232 AGLAIMGIPLALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKG-IVYALITLGLLVAV 290 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L+P ++G + + L + G G++G + +A + Sbjct: 291 NQIEAHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFL 340 >gi|218548074|ref|YP_002381865.1| permease [Escherichia fergusonii ATCC 35469] gi|218355615|emb|CAQ88226.1| putative permease [Escherichia fergusonii ATCC 35469] gi|324112983|gb|EGC06959.1| hypothetical protein ERIG_02588 [Escherichia fergusonii B253] gi|325496477|gb|EGC94336.1| permease [Escherichia fergusonii ECD227] Length = 353 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 121/346 (34%), Gaps = 12/346 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + + ++ E Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAY----LLEWPTARLESIGCS 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ ++ ++ + LL F + ++ + + + + + +P A Sbjct: 66 RSLATSLVLIVFVGILLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALM 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++++ + D + +F+ + L + ++ + + +FF +D Sbjct: 126 DAGIIDAMAENMRTRMLSI-----SDSVVKFSLASLVGLLTLAVYLVLVPLMVFFLIKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 181 QQMLNAVRRVLPRNRGLAG-QVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP GA + V + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAW 345 >gi|41409738|ref|NP_962574.1| hypothetical protein MAP3640 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398570|gb|AAS06190.1| hypothetical protein MAP_3640 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 382 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 98/290 (33%), Gaps = 15/290 (5%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + + L F+ + + L +V + + RWL Sbjct: 64 WLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTR---RWL 120 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P + + ++ + + ++L + A + + + + Sbjct: 121 INGPAHLRSEQIDSAGNAAIEALHNNQAK---------LTSGALSTAATVTELVTAAVLV 171 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L FF G +I + + + + + ++A+ + +G Sbjct: 172 LFTLIFFLYGGRNIWRYVVQIVPAHARDRVHEAGSAGYGSLIGYVRATFLVALTDAAGVG 231 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + G+P + L + + A IP + F AV + LL KG I A Sbjct: 232 AGLAIMGIPLALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKG-IVYALITLGLLVAV 290 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L+P ++G + + L + G G++G + +A + Sbjct: 291 NQIEAHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFL 340 >gi|283786108|ref|YP_003365973.1| putative permease [Citrobacter rodentium ICC168] gi|282949562|emb|CBG89178.1| putative permease [Citrobacter rodentium ICC168] Length = 354 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 119/347 (34%), Gaps = 14/347 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L ++++ + WP + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVSIVLAYLLEWP-TVRLEAIGCSRR- 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AT V+ +F+ LL + M + + + + LSD + Sbjct: 68 ----LATSVVLIVFVGILLLMALVVM---PVAWQQGIYLIRDMPGMLNKLSDFAATLPRR 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ T + T G D + +++ + L + ++ + + +FF +D Sbjct: 121 YPALMDAGIIDAMAENMRTRMLTLG-DSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWKEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTLPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L +V G G+F L LI + Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|18309570|ref|NP_561504.1| permease [Clostridium perfringens str. 13] gi|168207396|ref|ZP_02633401.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|18144247|dbj|BAB80294.1| probable permease [Clostridium perfringens str. 13] gi|170661234|gb|EDT13917.1| putative membrane protein [Clostridium perfringens E str. JGS1987] Length = 366 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 4/336 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSE 138 +L + EL+ + V ++I E +L H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTN---YVQNLFTEIMASFKVPEGINSYLPHGDTNKLITFI 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + T +++ A +++ + I L + S+ + Sbjct: 151 GSMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKNLGN 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +I+ + I + I ++ G++ + + L V+ I MIP Sbjct: 211 EILEFVKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V ++ + + A + ++ I L P L+G + L G+ Sbjct: 271 PFIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTL 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G +G+ +G +M++I + + I + E Sbjct: 331 GGAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|218532471|ref|YP_002423287.1| hypothetical protein Mchl_4584 [Methylobacterium chloromethanicum CM4] gi|218524774|gb|ACK85359.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 652 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 107/368 (29%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WA 119 + ++ ++ L + E +L + + + L Sbjct: 71 AVLLVVVLAFGL-----LGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF---------------------IPRFASRFGM 158 S+ ++ + + + + + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRTGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|74318271|ref|YP_316011.1| putative permease [Thiobacillus denitrificans ATCC 25259] gi|74057766|gb|AAZ98206.1| putative permease [Thiobacillus denitrificans ATCC 25259] Length = 389 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 108/324 (33%), Gaps = 18/324 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P++ A+II + P ++ ++ L + L Y E Sbjct: 55 FIPLVLAVIISYALAPPMRLL-----GRLHVPQIVGASLLLALIVGAGGSLAYSLRDEAI 109 Query: 91 ELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF- 148 ++ + A + V + ++ + G + + + S+ + Sbjct: 110 GMIETLPQAAKKLRRTVQKEIAGLESGAIGNVQEAASQIERAARETASDPVVPRGVTRVQ 169 Query: 149 -------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + L + ++ FF G + ++L + F Sbjct: 170 IEEPRFRLEDYLWNGTLGALSIVSLAVMVLFLAFFMMISGDTYRRKLVQISGPAFSKKKI 229 Query: 202 --KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 ++ + I+ L GL +A+ GV GV+ ++ +IP GA Sbjct: 230 TLQVLNEISVQIQRYLLVQAFAGAIVGLATWAAFSWLGVEHAALWGVVAGVLNIIPYLGA 289 Query: 259 PISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I ++ LL G++ A + + + L P+L G ++ + F G++ Sbjct: 290 VIVAGGAALVGLLQFGSVSTALTVGGVSLVINSLEGYLLMPWLTGRANRMNAVVIFIGVL 349 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G GL +G +M I I Sbjct: 350 FWGWLWGAWGLLLGMPIMIAIKAI 373 >gi|16331809|ref|NP_442537.1| hypothetical protein sll0597 [Synechocystis sp. PCC 6803] gi|1001769|dbj|BAA10607.1| sll0597 [Synechocystis sp. PCC 6803] Length = 375 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 107/309 (34%), Gaps = 10/309 (3%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + +K + + + + + LL + + ++ +L+ + + G Sbjct: 71 RILVEKGLKRPWAVASVLLIALVVISLFLLIVIPLAIDQLGQLLDNLPGWFRSGNAQLLM 130 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L W +E + Q L + L F + G + + ++ + Sbjct: 131 LQ-----AWVNEHYANLQVDLQPLISQAIEKLSRILNSFGNQLLGLVG-VTISTSINGLI 184 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +++ F G I + S H + + + ++ F I+A + Sbjct: 185 LLVLTIFLVLGGEKIWDGIFSWFPH---PWQRDLQNLIRDTFEGYFATQAILAGILSVAQ 241 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + L P + + + +IP + +S +S+ L+++ N + + L I Sbjct: 242 MVVFTLLQAPYAILFAITIGLSTLIPFASALSIIVISLLLMLE-NFWLGVKILLAAVIVG 300 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I D + P L+G L L G + G+LGL + L ++I Sbjct: 301 QINDNVISPRLMGNRTGLNPAWIIVSLFVGSKLGGVLGLLVAVPLASVIKATSDRLRGLP 360 Query: 350 KENKEKISS 358 K++ E+ + Sbjct: 361 KKSGEQPAE 369 >gi|300864368|ref|ZP_07109241.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337643|emb|CBN54387.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 345 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 124/350 (35%), Gaps = 23/350 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIG-----FTSWPIYSSFISKKEESST 60 LN ++R++++F + L +F V+ I S+P+ S S Sbjct: 13 LNNSTLVRFLLLFASGWAFLTLLAYFETVIVVFTIASLVAFLLSYPV-RSLKRFLPHGS- 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + + + + + + ++L+ + P+ L Sbjct: 71 -AVTLVFLLSIIIVVSLSVTVGVTLLSQGQQLIDSITEFVNALAPLSDRLEGF------- 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q + E L+T + I + ++ IF+ FF D Sbjct: 123 ----LRERNLQVNLRVIEEQLRTQALGGIVSSITLL-QTVFTNVITFIFITAVSFFMLLD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q + + ++ +R + + F I+ + + V Sbjct: 178 GERLWQLMLNFLPK---HLHRRFARTIERNFLGFFQAQIILMLFLVTASFIVLLILNVRF 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L VI +IPG A+ ++++ N + A + + I I D + P + Sbjct: 235 ALILAVILGAFDLIPGIGATLGIALVFFIVLAQNYWLAFKVLIACIILQQIQDNIIHPRI 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L + FF L+ G R GLLG+F+ L +I ++ M + Sbjct: 295 MKNSLNLNPVVVFFALLVGARAAGLLGIFLAIPLAGVIVSWFEIEEMKGE 344 >gi|172039635|ref|YP_001806136.1| hypothetical protein cce_4722 [Cyanothece sp. ATCC 51142] gi|171701089|gb|ACB54070.1| hypothetical protein cce_4722 [Cyanothece sp. ATCC 51142] Length = 365 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 124/346 (35%), Gaps = 18/346 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-----LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 M PQ I+ ++ ++ L + G + +L+A +I F + Sbjct: 1 MNSWFSRPQKILVTWLLILVTGWLTIKTLSYIGGLISLILTASLIAFLLNYPVRGLKTVL 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + A + + + + I + L + + K+L++K+ + G L + Sbjct: 61 P--RSLAATLVYLGAIFIVIFLAITLLPPVVNQGKQLITKLPSLLEEGEQQLVTLQALIN 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 TK+L I + ++ + +I +I+ F Sbjct: 119 --------TKNLPIDLEFLASQILTKIEAQTKDIASTGFGLVLGTFNWFIDLIVVIVVSF 170 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + DG I + + + P ++ + K ++ G I+ + + L A+ L Sbjct: 171 YMLLDGEKIWKSIINF---FSPQIRGVLTTTLEKNLQRFLTGQLILGLFMAVSLTIAFRL 227 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P + V IM ++P +L N + A + + I + D Sbjct: 228 LGIPFFLLFAVFIGIMEILPFIGATLGIGTVTIILTFINWWLAVQVLVTAVIIQQVKDNL 287 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P ++G LP + F L+ G + GLLG+ + L +I I Sbjct: 288 IAPRIMGNLTGLPPVMIFIALLLGAKIGGLLGVILAIPLTGVIKGI 333 >gi|315032078|gb|EFT44010.1| conserved hypothetical protein [Enterococcus faecalis TX0017] Length = 366 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 118/344 (34%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTISLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|124484941|ref|YP_001029557.1| hypothetical protein Mlab_0113 [Methanocorpusculum labreanum Z] gi|124362482|gb|ABN06290.1| protein of unknown function UPF0118 [Methanocorpusculum labreanum Z] Length = 346 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 119/340 (35%), Gaps = 22/340 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ I L L + + AL + P++ I + + F A I T V+ + Sbjct: 14 ILVVLIFLAILVVSWNYIFLFILALSVAVVFLPLHRKMIKRIP--APFSAGILTTFVLAV 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + + + + I + + HL+ Sbjct: 72 IIGICVGIVVVVSSDF------------------EYFMSIFQTIINTVTNMLHLTDGNDF 113 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +K + P FA + + +I ++ G I L S+ Sbjct: 114 SLKIVDEVKNILLTMFPSFALSAAQMIPAVIIDMILFYSLVYLSIICGDRIWADLCSVIP 173 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ ++ S ++ IA + + + L G + + A+ A+ Sbjct: 174 AGSMDNVLLMAKKTKDILFSIYVVHVFIAFLTFFLAYAFFLLLGYGHEIFFSTMCALFAL 233 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + V IY L G+I G + + D +RP L G +K+ + Sbjct: 234 IPVLGPLMVIIFVGIYALCLGDIRGVILTATLGYFLTCVLTDLIIRPKLTGKRVKIRPML 293 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F G GG MGLLG +GPVL+ L ++ I ++ Sbjct: 294 MFVGFFGGAMAMGLLGFVLGPVLLILGLTAYEIFIKEGRK 333 >gi|253576668|ref|ZP_04853995.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843878|gb|EES71899.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 364 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 119/330 (36%), Gaps = 9/330 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+ + + + PI KK +S++ ++++ + + ++ Sbjct: 41 IVPLTISGFLYYLLRPIVQFLERKKLNR--------VLSILLIYLLFAGVITIFLIVVWP 92 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L +++ + + L + + + + + T + ++ I Sbjct: 93 PLRRQIIEFMNNVPKMINGLQTQFNDIRDNRYLSMVTNETSPELMSKVTEYLNSAMEAIS 152 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + S D+ + + + I L++ ++ ++ L + + + + + Sbjct: 153 GYLSHVVTFLNDFVIVVGTVPILLYYMLKEDERVTPLLVRMLPSRYRRDGASVIHEIDNM 212 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 ++ G I A+ + +WL G+P + L V+ A+ IP + + + Sbjct: 213 LKGFIAGRMISAMLLAFMSFIGFWLIGLPYPLLLAVVGALFNFIPYFGALLGAIPCVIVA 272 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + + I + P++ G I + L T L+ G+LG+ + Sbjct: 273 FTVSPSMVFWVIVIVVVAQQIEGNLISPYIYGKTINIHPLTTIVLLLVAGDFGGILGMIL 332 Query: 331 G-PVLMALIAVIWKESIMAIKENKEKISSN 359 PV M L ++ K + E E+++ + Sbjct: 333 AIPVYMMLKIIVLKAHKLYFAEKIEELTES 362 >gi|167037464|ref|YP_001665042.1| hypothetical protein Teth39_1051 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115878|ref|YP_004186037.1| hypothetical protein Thebr_1078 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856298|gb|ABY94706.1| protein of unknown function UPF0118 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928969|gb|ADV79654.1| protein of unknown function UPF0118 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 341 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 126/349 (36%), Gaps = 20/349 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKEESS 59 I + ++F+I+ + L F +P + +I + P+ K S Sbjct: 2 QIKKTYLLFLIIGATGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPM-----VKFFNSK 56 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F ++ + V + +LF +Y + L+++ + Q + + + Sbjct: 57 GFSIFLSILLVFLIVASGILFFSFYIV---PLLINEFIALLQMIPFYAEEIQKLLIQLKF 113 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L +L + N + A + + L + II + I F+F + Sbjct: 114 NYL--SYLPPQVEKVLDKNLGSLNNAFTYHIDSAFKSVITILKDAVDIIIIPIVTFYFLK 171 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++++ + + + I + + K++ I+ + L V Sbjct: 172 DKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLIKVK 231 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ I+ +IP PI ++ + + ++ + + + + + P Sbjct: 232 YAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFITPK 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A+I I E + Sbjct: 292 IMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIEIFIE 340 >gi|330829202|ref|YP_004392154.1| Permease PerM [Aeromonas veronii B565] gi|328804338|gb|AEB49537.1| Permease PerM [Aeromonas veronii B565] Length = 356 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 115/342 (33%), Gaps = 14/342 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++++ ++ AP+L AL++ + WP+ + K S T + Sbjct: 15 DPDAVTLFLLLVFCFTIIWLFGDLLAPLLVALVMAYLLEWPVAR--LQKAGLSRTLATSV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + LL L + + L + H R L D + L Sbjct: 73 ILILFIAVAVASLLGLIPTLVSQGINLAKEAPAMLTHAQDYVRTLPDKYPELIDVSLVET 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + L + + + + + +I + + +FF +D + Sbjct: 133 VIDNIRQRILSGGEHLVSASLSSLV--------NVVAIMIYLILVPLMVFFMLKDKRVLM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + ++I + G I + G+ + L G+ V L Sbjct: 185 GSLRRFLPRNRTLVNRVWVEMNNQII-NYIRGKVIEILIVGIATYVPFALMGLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V +IP GA + V++ L + + + + + +D L P L Sbjct: 244 VAVGFSVLIPYIGAAVVTVPVAMVALFQWGLTPEFAWLMVAYLVIQALDGNLLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L+ + Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVINAW 345 >gi|168334446|ref|ZP_02692621.1| hypothetical protein Epulo_05699 [Epulopiscium sp. 'N.t. morphotype B'] Length = 385 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 115/342 (33%), Gaps = 18/342 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE-----------SSTFLAVIATVSVMCLFIVPLL 79 PV++ II + Y+ K + + +A++ +++ L + L Sbjct: 40 LMPVITGFIIAYILKGPYNFVRDKVLRMSSKDTQTIQTTKSVIALVMAYTLVILVLTILA 99 Query: 80 FLFY-YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L ++ L+S + + D G + + ++ + + + Sbjct: 100 ILVIPQLWNSIQSLISTLPDQIDILFARFQGFLDDMDGRLDTSVDSEIYTQLEEAWVTVM 159 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY---RDGFSISQQLDSLGEHL 195 F+ D IP + I I I +++F R +S+ L + Sbjct: 160 NFVSAILTDVIPAVLNGIVEITTSITNMIFAFIFSVYFLTGKERLSSQMSRILYAYLPKA 219 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ISRI + G A G++ + +P V + VI +IP Sbjct: 220 RAERILYISRITNNSFTNFINGQVAEAFILGILCFVGMLIFKMPYAVLVSVIIGATNIIP 279 Query: 256 -GGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 G + +L+ N A ++ + I + P +VG I LP + Sbjct: 280 IFGPIFGSIPATFIVLMDDPSNPMMAVWFVVFILVMQRIDGDIIYPRVVGDSIGLPGVFV 339 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +V G GL G+ IG L A+ + KE KE Sbjct: 340 MLAIVIGSGLWGLTGMIIGVPLAAVFYRLIKEGTNLRLAEKE 381 >gi|90581674|ref|ZP_01237463.1| putative permease PerM [Vibrio angustum S14] gi|90437158|gb|EAS62360.1| putative permease PerM [Vibrio angustum S14] Length = 361 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 118/339 (34%), Gaps = 14/339 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + +I+ +++YF P+L A+++ + WP+ ++K T I Sbjct: 15 DPHAVSLVVILLGGFLTIYFFGSLITPLLVAIVLAYLLEWPVAR--LNKLGMPRTLSVAI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L ++ L L ++ L + V + ++S +P + Sbjct: 73 VLLVFAGLMVLALFGLVPTIWHQITNLSADVPKMFN---DLQIYVSSLPERYPDFVQPAQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +L+ ++ + S + +I + + +FF +D + Sbjct: 130 VVDLMNTLREKVLGLGESVVKGSLASLVS-----LATIGVYLILVPLLVFFLLKDKDEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ K+ + + I + G I G+ + + + V LG Sbjct: 185 RTLLNVLPK-NRRLASKVGSEMNQQISNYIRGKVTEIIIVGIASYVTFEVMDLRYAVLLG 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA V++ L + L L I + L P L Sbjct: 244 VLVGLSVLIPYIGAAAVTVPVAMVGLFQWGWTPDFWWLLLAYGIIQMLDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|322378404|ref|ZP_08052858.1| membrane protein [Helicobacter suis HS1] gi|322380085|ref|ZP_08054341.1| aminoacylase [Helicobacter suis HS5] gi|321147492|gb|EFX42136.1| aminoacylase [Helicobacter suis HS5] gi|321149160|gb|EFX43606.1| membrane protein [Helicobacter suis HS1] Length = 351 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 140/366 (38%), Gaps = 29/366 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + LY + F +L A ++ T + + F + F +++ Sbjct: 1 MRPVYFFWLLFGIAFYWMLYLYEDFLMDLLIAGLLCVTVFWLKEFFDKHM--RNLFSSLL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEM--KELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ ++PL FL Y M + L N+ + ++ D P Sbjct: 59 CVLVLLSCLVIPLYFLIYKSMDFVFHLNLERLSFFINKFKTDLLMYVQDFP--------- 109 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + Q + + +I F+S G L + + +++ LF + G + Sbjct: 110 ----TLSQYAHKILSNVSAQALMSYILHFSSDIGKYSLKFASDTVMVLVFLFLCFFYGQT 165 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + K I R V ++R L I + +G+ + ++ Sbjct: 166 FYSYILEVLP-FEKIQSKGIFREVAGILRVVLLTSIINVVLQGVAFAGLVVWFKLDW-LS 223 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV 301 LGV+ + A+IP G + + V+ Y + +GNI A + L+ I + ++D ++P+L+ Sbjct: 224 LGVLYGLSALIPIVGGALVWIPVAFYEMYRGNITGAVVIALYSLILIGGLIDSLIKPWLI 283 Query: 302 GG--------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +K+ + FF ++ G+ G G+ +GP + A V+ + Sbjct: 284 GFIKRRVLKISLKINEILIFFSILAGISKFGFWGIAVGPTITAFFIVLLRVYEKVFTSTA 343 Query: 354 EKISSN 359 K+ S Sbjct: 344 RKMPSQ 349 >gi|323248844|gb|EGA32770.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 338 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 111/332 (33%), Gaps = 14/332 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +P+ I +I+ L+F G AP+L A+++ + WP + + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRW 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V L ++ + + + + + N+ P M A Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ +K + + L + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLV---------GLLTLAVYLVLVPLMVFFLVKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+ + L G+ Sbjct: 180 KEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ +IP GA + V + L G F I + L P Sbjct: 239 SLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L + L L +V G G+F Sbjct: 299 VLFSEAVNLHPLVIILSVVIFGGLWGFWGVFF 330 >gi|268326230|emb|CBH39818.1| conserved hypothetical membrane protein, DUF20 family [uncultured archaeon] Length = 354 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 132/358 (36%), Gaps = 35/358 (9%) Query: 14 WMIMFIILVSL--YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W+I+ +I ++L Y L F ++ + + + + P+Y F+ + + + Sbjct: 10 WLILGLISIALLVYVLFRFCDVIIYGIFLYYVARPVYRGFVKRYKYERVGA-----FISL 64 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++PL+ + Y + + ++ +I + + ++ Sbjct: 65 FFIVLPLVLIGIYTL--STAYIELSKFLGHIDFGYTNYVDEI---VKRIKEIASSINMAD 119 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++++ + I + F+ + D+ L + + ++ +DG + + Sbjct: 120 ISNLITQGDKWSVYITHLSAFSGTM-SGYFDFPLKLFLTFVIAYYLLKDGAKLMAWITDT 178 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VPSHVA 243 KK V + + G + AI LV ++L +P + Sbjct: 179 FLGGKTELAKKFFDDVDSALYQVYFGNILTAILTALVAVVTFYLLNLIAPPQLLIPYPIL 238 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV---------- 292 G++ I IP G + + ++ YL ++ N L W I LFIV Sbjct: 239 FGILCGIGIFIPIVGVKLIWVPLTFYLGVQ-AYLNGILLTSWWFILLFIVVMFLVVDSVP 297 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + LRP++ + + GV G LGLF+GP+++ + A K + ++ Sbjct: 298 EYALRPYISKKY--VHVGALLLAYIFGVCIFGFLGLFLGPMILIIAASFMKIVLPELR 353 >gi|306820468|ref|ZP_07454104.1| possible permease [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551543|gb|EFM39498.1| possible permease [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 360 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 107/323 (33%), Gaps = 14/323 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT-------VSVMCLFIVPLLFLFY 83 P + + P+ K ++ + L+++ ++V LF++P++ Sbjct: 32 LTPFFWGIGFAYILNPLMIFIEKKSKKKNRVLSLLLVYAIFFGILTVFSLFVIPVITQNI 91 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E K + IP L I G E + +++ Sbjct: 92 KDLYEKSSTFPKTIYEYIEKIPNKELLLGISGIEQLLEENSSNITKWLLNF-------SN 144 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + I A F L++ L + I L+ + + + + + + Sbjct: 145 GTLSSIVGTAFSFTSKLLNFVLGLFVSIYFLYEKEKLIDYMKKVIRAFAKKKKADLIIDY 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + +G I + G++ + + + L +I ++ MIP P Sbjct: 205 FSKVNSYFYNFLVGKLIDSTIIGILCFIGMSVLKLRYALLLSIIVGVLNMIPYFGPFMGA 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S+ + + + A L+ + L P ++G + L F ++ G Sbjct: 265 VPSVIITLIYSPIQALWAALFILVLQQFDGWYLGPKILGDTVGAKPLFIIFSILVGGSFA 324 Query: 324 GLLGLFIGPVLMALIAVIWKESI 346 G LG+ + L + ++W + Sbjct: 325 GPLGMLLAVPLFKSLFMLWDTFL 347 >gi|228999177|ref|ZP_04158759.1| hypothetical protein bmyco0003_37340 [Bacillus mycoides Rock3-17] gi|228760794|gb|EEM09758.1| hypothetical protein bmyco0003_37340 [Bacillus mycoides Rock3-17] Length = 358 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 115/318 (36%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P L A I + P+ + T++++ ++I+ L Y Sbjct: 42 IFVFKVAITPFLIACFIAYLLHPLIEKLYKEGMPR--------TLAILLIYILFFGGLGY 93 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++++ N+ P+++ M T + K+ Sbjct: 94 GIYKGTPVVIAQLQEINK---QFPQFMKMYDSWMDGVTEQTDNFPSFIHEKVKQIFVGIE 150 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D + + + + Sbjct: 151 MKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHVFWKFVPSKWRSTGQVL 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 211 AKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIVGVTDIIPYFGPILGA 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 271 IPTLMIAATVSTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEIG 330 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 331 GIVGLLIAVPILAVIRTV 348 >gi|266623643|ref|ZP_06116578.1| putative membrane protein [Clostridium hathewayi DSM 13479] gi|288864557|gb|EFC96855.1| putative membrane protein [Clostridium hathewayi DSM 13479] Length = 386 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 109/341 (31%), Gaps = 15/341 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L GF +P L ++ F + L L + Sbjct: 37 MLFGFISPFLLGGVMAFILNVPMRRIEKMLPMKENSR----LRRPIGLVFTLLFVVGLLL 92 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ + +P +L+ + G + + + + Sbjct: 93 LVIFVVMPQLFETFMSLQNSIPVFLAGVKKGAEDLFAQNPEILDYINGIQIDWKSFSEDV 152 Query: 146 IDFIPRFASRFGMIFLDYCLS-------IIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 I F+ AS + +S ++ + ++S Q+ L P Sbjct: 153 IGFLSSGASTVLNSTITAAVSIVSGVTTFGIALVFAIYILLQKETLSAQMKKLMRAFLPD 212 Query: 199 YWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V + +TF G + A+ G + + +P + +GV+ A A+I Sbjct: 213 RVTEHVLSVAGLAYNTFSHFLTGQCLEAVILGTMFFLTLSVLRLPYALLIGVLIAFTALI 272 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + +L++ +A I I + P +VG + LP + Sbjct: 273 PIFGAFIGCVIGAFLMLMVKPLDALLFVAVFFILQQIEGNLIYPHVVGNSVGLPSIWVLV 332 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G MG++G+ I L +++ + + ++ A E K + Sbjct: 333 AVTIGGSAMGIVGMLIFIPLCSVLYSLLRGTVYARLEKKNQ 373 >gi|313885294|ref|ZP_07819045.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619400|gb|EFR30838.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] Length = 377 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 121/358 (33%), Gaps = 21/358 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI---------YSSFISKKEESSTFLA 63 +I+ +L LK F + A I+ I + S FLA Sbjct: 28 HQVILAFFRTALSVLKPIFIGGVLAFILNIIMKQIEKIYFTESDAKWVKKTRRPVSLFLA 87 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I + V+ + ++ +LE+ + K+V Q I P A+E + Sbjct: 88 IITVLLVLVFVLNLVIPQLVSVVLEIVNAIPKLVNQVQSFIVDHE--DFFPPLAQAAENF 145 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 Q++ FL + I + L ++ I ++ + Sbjct: 146 -----DIQNITGRLVGFLNNLSQNLIGGTLATI-TTTLSGIVNGILALMLAIYILLSKEK 199 Query: 184 ISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +++Q LG+ PA W + + + G I A+ G ++ + P Sbjct: 200 LAEQFKRLGQAYLPATWCRRLHYVLDVANRSFTGFIGGQLIEALIIGSLVSIGMMIFRFP 259 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G +T + A+IP V L+ + ++ + I + P Sbjct: 260 YPSMIGALTGVTAVIPVLGAYISGIVGFLLISVQSPLQGLAFLVFIIVLQQIEGNIIYPK 319 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +VGG + LP L + G G++G+ + + + + K + + + I Sbjct: 320 VVGGKLGLPALWILVAVTVGGGLFGIVGMLFAVPITSTLYTLIKNDVAYREAQMQPIK 377 >gi|319649707|ref|ZP_08003863.1| hypothetical protein HMPREF1013_00467 [Bacillus sp. 2_A_57_CT2] gi|317398869|gb|EFV79551.1| hypothetical protein HMPREF1013_00467 [Bacillus sp. 2_A_57_CT2] Length = 352 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 119/322 (36%), Gaps = 10/322 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 YF+ P++ A I P+ +K + + +I + + + F+ Sbjct: 21 AVFYFILPVSVPLIVAFITALILEPVVKLLQNKIKINRRVSVLITFLGFVLFIGLSGYFI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E +LV + WL A++ K L + ++FL Sbjct: 81 TTKVITEAIKLVENAPMYINEIT--KAWLRAEADFSNAAKDLPKDLVD--EISNQIQSFL 136 Query: 142 KTNGIDFIP----RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 D + +Y +S I +IALF F D + + L + Sbjct: 137 NKTKNDLVAYVNIDSLKALLTNIPNYLVSFIVYLIALFLFLIDLPRLRKGLYNHLTEKTA 196 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV-ALGVITAIMAMIPG 256 K ++ + V F ++++ +V + +I I + Sbjct: 197 DKVKFMTSRLSYVGFGFFKAQFLVSVIIFIVSLIGLLFINPEMALIMSIIIWIIDFIPII 256 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G+ + +++ L+ G++ T L + A+ L I+ +T+ P ++G I L L T + Sbjct: 257 GSIVILGPWALFHLLTGDLAMGTQLAILAAVLL-IIRRTVEPKVMGTHIGLSPLATLIAM 315 Query: 317 VGGVRTMGLLGLFIGPVLMALI 338 G++ +G+LG IGP+L+ Sbjct: 316 YLGLKLIGILGFIIGPLLVIAF 337 >gi|317124038|ref|YP_004098150.1| hypothetical protein Intca_0896 [Intrasporangium calvum DSM 43043] gi|315588126|gb|ADU47423.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 379 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 97/297 (32%), Gaps = 17/297 (5%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 PI A + V+ + + + EL ++V + Sbjct: 69 PISRRLARAMP--VGLAAGTTVLGVILIVSALFTLIGQQFSSGLSELTAEVATGLE---Q 123 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + WL T ++ + + + + + A+ G+ + Sbjct: 124 IRDWLRT-----------TFSITDSEFDRYFENLREGVSNSGNLGQTAADVGLTATHFIA 172 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + ALFFF DG I + L + RI + + I+A+ + Sbjct: 173 GMFIALFALFFFLYDGPRIWAWIVRLFPRVSRPRVDSSGRIAWDQLSAFVRATIIVALVD 232 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLW 284 + + + VP A+GV+ + A IP + AV++ L L+ A + Sbjct: 233 AVGIALGATVLKVPFAFAIGVLVFLFAFIPIVGALLSGAVAVILALVSHGFGVALIMLAV 292 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+P L+G + + L + G G++G A++ + Sbjct: 293 VIAVQQLESHVLQPVLLGHAVSIHPLAVILAIAAGSTVAGIVGALAAVPFAAVLNAV 349 >gi|301114839|ref|XP_002999189.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262111283|gb|EEY69335.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 922 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 78/211 (36%), Gaps = 10/211 (4%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK---ISR 205 + + F+ + F I +LF+ + ++ E L P K + R Sbjct: 324 LVFLVFTLVIAFVSLGIRSFFFISSLFYLLC---TNWDPIERFVEDLLPIQIDKRPDVVR 380 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 + KVI F +A +V ++ + +T ++++P P + Sbjct: 381 SLRKVIEGVFFLPLKMASIHAIVTMVSFTIVNADFMYLATTVTFFISIVPIIPPYLVCVP 440 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I + + +I A LF + ++D+ L + L + +V GV G Sbjct: 441 WVISIGLTSSIIKALALFAVQYVAFTVLDEMLY---EKSIVALNAYVSALSVVFGVYVFG 497 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ GP+++ + + S I+ +++ Sbjct: 498 FEGVIFGPLIVCGVTFAYDVSNHGIQAAQDE 528 >gi|77405853|ref|ZP_00782936.1| membrane protein, putative [Streptococcus agalactiae H36B] gi|77175563|gb|EAO78349.1| membrane protein, putative [Streptococcus agalactiae H36B] Length = 377 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 122/334 (36%), Gaps = 19/334 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI----ATVSVMCLFIVPLLFLF 82 + F A II +Y K + S L I + + FI +++LF Sbjct: 39 IFPFLMGAGIAYIINIVMS-VYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLF 97 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ---SLKILSET 139 + ++ +S +++ + + + ++++ SE + +L S+ Sbjct: 98 SIVIPDLISSLSSLLVIDTGALA--KLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQ 155 Query: 140 FLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK + S L+ +S IF I L + + +Q + L + Sbjct: 156 ILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVL----ANKEQLGRQFNLLIDTYLG 211 Query: 198 AYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + K I+ + F+ T+ A+ G + + P + +GV+ A A+I Sbjct: 212 STGKTFHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALI 271 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + L+ ++ A L+ + + P +VGG I LP + Sbjct: 272 PVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLT 331 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G G+LG+ + + A I I K+ I+ Sbjct: 332 AITIGGALWGILGMLLAVPVAATIYQIVKDHIIK 365 >gi|186686551|ref|YP_001869747.1| hypothetical protein Npun_F6544 [Nostoc punctiforme PCC 73102] gi|186469003|gb|ACC84804.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 354 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 113/338 (33%), Gaps = 19/338 (5%) Query: 16 IMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + ++ +LY L ++ A +I + F+ K +S ++ ++ Sbjct: 20 LAVMLAAALYILYQLLPVLELLVIAALIALILRTLL-RFLQKLVKSQDVAVLLLIGLIIG 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 +V + E ++L+ +P +L+ + G + + Sbjct: 79 FVVVLATVVVPSVTFESQKLIK----------TLPTYLNRLTGDVEQLRQKFTFIPDISQ 128 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I N D + F L+ + ++ +I + D S+ + + L Sbjct: 129 ALIQLR-----NLTDHLLGGVPVFLGEALNLTIELVATLILALYMAYDPNSLVKGILRLV 183 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +K+I + +R G I I G + G+PS + G+I + Sbjct: 184 PRRHHQRFKRILKACETRLRGWIFGTGIAMIFLGAGATFGLLILGIPSALPFGIIAGLFE 243 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP + + + + + + + + I ++P ++G + + + Sbjct: 244 IIPYFGSVIGAFLPALVALSISPLKLVFVLILFFVMNQIDAHVVQPLVMGQQVNIHPVMV 303 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + G +G+ + A+I + E K Sbjct: 304 IVTFLVMGKLFGFIGVLLAVPAAAVIITLIDEFTPEEK 341 >gi|157826034|ref|YP_001493754.1| hypothetical protein A1C_04960 [Rickettsia akari str. Hartford] gi|157799992|gb|ABV75246.1| hypothetical protein A1C_04960 [Rickettsia akari str. Hartford] Length = 351 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNITAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGLIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + + +P M L Sbjct: 61 IYLIFLSMFFLSLTILVPIIYGQIFTFINNIPKYKNYLQAEI-----LPPIMAKIYLIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLTNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 TNMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTIIGIDLAILLG 235 Query: 246 VITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + L P ++G Sbjct: 236 IVTGFLVIIPFLGTFISFLLTLIISYLTFGINTKLLYIMIIYLVGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|297156749|gb|ADI06461.1| hypothetical protein SBI_03340 [Streptomyces bingchenggensis BCW-1] Length = 403 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 117/348 (33%), Gaps = 22/348 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLK--------GFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M++ + LV+ Y L G +L A + P ++ Sbjct: 34 PRWLPRAMVLALALVACYRLATWAFDQLTGLLLNILIAFFLALAIEPAVDRMAAR-GVRR 92 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + ++ L ++ +V ++ + W+++ + Sbjct: 93 GVATGLVFLGILIGVAGFFTLLGSMLADQIMTMVEDFP---KYLDQLVIWVNE----TFH 145 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +EL + +++++ + + + A G +F +++ F+F Sbjct: 146 TELSRVEIQDSVLHSDWLQSYVRNSANNVLDVSAQVLGGLFRVLTVTLF-----AFYFAA 200 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ GVP Sbjct: 201 DGPRLRRALCSVLPPTRQAEVLRAWEIAVAKTGGYIYSRGLMALISGVAHYVLLEWLGVP 260 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + A + ++ I + L+P Sbjct: 261 YAPALAVWVGLISQFIPTIGTYLAGALPMLIAFTVEPWYALWVLVFVVIYQQFENYLLQP 320 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + + +F ++ G +G +G I A + I Sbjct: 321 RITARTVDIHPAVSFGSVIAGTALLGAVGALIAIPATATLQAFLGAYI 368 >gi|253997588|ref|YP_003049652.1| hypothetical protein Mmol_2223 [Methylotenera mobilis JLW8] gi|253984267|gb|ACT49125.1| protein of unknown function UPF0118 [Methylotenera mobilis JLW8] Length = 360 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 133/358 (37%), Gaps = 20/358 (5%) Query: 6 LNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFIS----------K 54 +N W++ + +V + Y L P L A I+ + + P+ + + Sbjct: 1 MNKHTNTAWLVAVLSVVGIIYLLGPILTPFLIAAILAYIANPLVNKIEAIQCNSIAKKLS 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDI 113 + S T V+ V + + + LL + E +L K+ N + WL Sbjct: 61 FKPSRTIATVLVLVLLFAVLTIILLIMIPLLQHEFVQLSQKIPAYLNTAKTSLEPWLQKN 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G T+ + N I S GM + + +++ + + Sbjct: 121 FGIS------TEIDPTQIQAILTENWKTTGNFAKNIALSLSSHGMTIIGWLGNVVLIPLV 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+ D + Q++ +L ++I+ + V+ G + + + + Sbjct: 175 LFYLLVDWNILLQKISTLLPRSLIGKTQEIAADIDAVLAEFLRGQLTVMLLMSVFYATGL 234 Query: 234 WLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 WL G+ + +G+++ ++ IP G A +L GN+ + + + I + Sbjct: 235 WLVGLEFALPIGILSGLLGFIPYLGFGLGLTLAAISGVLQYGNLNDLIPVLIVFGIGQLV 294 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P+LVG I L L F L+ G + G G+ + + A IAV ++ + Sbjct: 295 ESMALTPWLVGDRIGLHPLVVIFALMAGGQLFGFAGILLALPVSAAIAVGFRHAKQKY 352 >gi|95928937|ref|ZP_01311682.1| protein of unknown function UPF0118 [Desulfuromonas acetoxidans DSM 684] gi|95134838|gb|EAT16492.1| protein of unknown function UPF0118 [Desulfuromonas acetoxidans DSM 684] Length = 370 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 116/320 (36%), Gaps = 20/320 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+L +LI F P+ ++ + + + + + L ++ +L Y Sbjct: 44 FVPLLLSLIAAFLLDPLVNAMEKRHIPRTRAIFSVFFMISATLLLL-GSWLIPYTQNMWD 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+S I R A W P + ++T + Sbjct: 103 SLLSDFPRYTSQLITYLR---------EAQASWQSRF--PFLEQYDLTQTVRTTAEQVLS 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + L +I + I FFF RDG +I + L SL + + +S +V + Sbjct: 152 FILVQTPKSALKLGSLMILVPIFSFFFLRDGTTIMRGLTSLAPNRYFEMAHDLSFLVSRQ 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-----FTAV 265 + G I A G+V+ + L + LG+ I +IP PI Sbjct: 212 MAHFVRGRIIEAAIIGIVVATGLSLTDIRYAPLLGLFAGITNLIPYIGPIVGMIPGILIA 271 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKT-LRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ L + G + + L+ I I+D L P L+ L + +V G + G Sbjct: 272 AVDLGLGGQFWW--IVILYILIAQVILDNFILIPILISRVANLHPVLVILAIVMGGKLYG 329 Query: 325 LLGLFIGPVLMALIAVIWKE 344 +LG+ IG + + + + E Sbjct: 330 VLGMIIGVPIASAFKIAFIE 349 >gi|325579227|ref|ZP_08149183.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] gi|325159462|gb|EGC71596.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] Length = 348 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 114/341 (33%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +++YF AP+L A+++ + + K + Sbjct: 11 RRLSDPQAMGLLAILLFGFIAIYFFSDLIAPLLIAIVLAYLLEMPINFLTKKLKFPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + L ++ L + L+S + + WL +P Sbjct: 71 TLIIFGGFLTLALLIFFGLVPTLWNQTISLLSDLPAMFNK---LHEWLLALPEHYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +T + + + F ++ I M + + + + +FF +D Sbjct: 128 YTMIDTFFSAARAKILGFGESAVKLSITSL-----MNLVSLGIYAFLVPLMMFFMLKDKT 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + K+ + + I + G + + G+V + G+ + Sbjct: 183 ELLAGVSRFLPK-NRLLASKVWNEMQQQIANYIHGKLLEILIVGVVTYIIFLSFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L V + ++P GA + V++ + + I + ++D L P+L Sbjct: 242 LLSVAVGLSVLVPYIGAVLVTIPVALVAMFQFGISPTFWYLIVAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEVVNLHPLVIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|325270826|ref|ZP_08137416.1| permease [Prevotella multiformis DSM 16608] gi|324986837|gb|EGC18830.1| permease [Prevotella multiformis DSM 16608] Length = 355 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 127/360 (35%), Gaps = 14/360 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M +T+ + I +I IL + L G P A ++ + +PI + Sbjct: 1 MAQTITFDKFIRWALIALAILAVGFIINALSGVLLPFFVAWLLAYLLYPIVKFVQYRLHV 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 L+++ T+ + I + M+ + + V H LS I Sbjct: 61 PGRALSILVTLLFVAAVITAIFLFIVPPMIGQIDRLMHVANRYMHETTHTDSLSAI---- 116 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + LK T + + + I L S I ++ +FF Sbjct: 117 VQRWVMENQIEIERYLKSPDFTNTLKTAMPKLFSVIGQTASIVLSIIASCITLLY-MFFI 175 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D +++++ + +W +++ V + + + G ++++ G++ + + Sbjct: 176 LLDYETLTEKWIKIFPRNVRPFWAGLAQDVERELNNYIRGQGLVSLCLGILFCIGFTIID 235 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELFI 291 P + +G++ I+ ++P + L+ G F A+ + Sbjct: 236 FPMAIGMGILVGILNLVPYLHTFALIPTVFLALLKAADTGQNFWIIFGSALAVFAVVQVL 295 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +D + P ++G + L L +G +GL I L LI W+ + ++ Sbjct: 296 MDMVITPKIMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEEQ 355 >gi|220908232|ref|YP_002483543.1| hypothetical protein Cyan7425_2839 [Cyanothece sp. PCC 7425] gi|219864843|gb|ACL45182.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 363 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 117/316 (37%), Gaps = 21/316 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 FA +++A ++ F S ++ + + ++ +++ L + + + Sbjct: 47 PLFAVIITASLLAFLLNYPVSWIEAQGGKRAPASVIVFLLAITILIGLGVTLVPVALAQ- 105 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK------ 142 A Q + +P WL + A W + + P + + L Sbjct: 106 ----------AQQLAVRLPEWLEKGRQQIVALSQWAEAMGFPLDIDAIGTQLLDRLRDQL 155 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 A LD ++II II F+ ++G + + L + + Sbjct: 156 QALTQGALNLAVGTVSSVLDALVNIILTIILTFYLLQNGDELWRSLIEWLPVKIQQPFSQ 215 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R+ ++ FLG I++ + L Y L VP + + ++ + P G + Sbjct: 216 TIRL---SFQNYFLGQLILSTCIAIGLVPTYLLLKVPFGLLFSLAIGLLTLFPFGGTVGN 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + + ++ +I+ + G I I + + P ++G L + F ++ G + Sbjct: 273 ILVGLLVGLQ-DIWLGLRAVIAGIIVQHIFENFVAPRVIGSVTGLNPVWVFLAILAGAKI 331 Query: 323 MGLLGLFIGPVLMALI 338 GLLG+ I + A+I Sbjct: 332 SGLLGVVIAVPMAAVI 347 >gi|257454111|ref|ZP_05619385.1| permease [Enhydrobacter aerosaccus SK60] gi|257448589|gb|EEV23558.1| permease [Enhydrobacter aerosaccus SK60] Length = 408 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 131/349 (37%), Gaps = 7/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + I +Y L+ P L A I+ + P+ K ++ + Sbjct: 16 KRLFISLFLVAIGYIIYQLQSVILPFLVAFILSYAINPLVQKLQDKAHIRRWVAILLVYL 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHL 127 S + + L +L +++ V A + R W+ Sbjct: 76 STGLMIGLILWWLIPLVWEQLQSAWKYVPTAIDYYNNTLRGWVRS--HTPIRLPAMQVRD 133 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L E + T+ F GM ++ ++ + I +F+F + + Sbjct: 134 MSKGLVDFLKENYNITDARSFFTNLMLS-GMNIINVAGIVVLVPILMFYFLYNWDERLVK 192 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + +I++ + + S G ++ + G+V L G+ + +G++ Sbjct: 193 MRHMIPNRYIPSVYRIAKESDEALMSFIKGQLLVMVLLGMVYAVQLQLIGLKVGLIIGMM 252 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G + F A I L + + + + GA + L+P L+G Sbjct: 253 AGIASFVPYLGFTLGFIAAIIAGLFQFGVDWVHLVLIVGAFMVGQAVEGYVLQPLLLGDK 312 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F ++ G G+ G+ I L A++ V+++ + + +E + Sbjct: 313 IGLSPLWVIFAVLAGAALAGIAGMLIALPLAAVLNVLFQHAYDSYRETE 361 >gi|302335232|ref|YP_003800439.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] gi|301319072|gb|ADK67559.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] Length = 435 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 23/354 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE------ESSTFLAVIATVS 69 I + SL ++ +P++ + +P F + V+ + Sbjct: 38 IADAVGTSLAWVYAIVSPLIVGGLAAILLYPGVKWFARRLGRVPLLSGREKLRHVLGVLL 97 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V F++ L L + + + ++ N + + G W L+ Sbjct: 98 VCVCFVLALSVLVALLLSVITGSIHRIRFENLESLA-----QYLAYGADGLYRWLIRLTT 152 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFL-------DYCLSIIFMIIALFFFYRDGF 182 + + F+ G + +++F I + D Sbjct: 153 SLGVPPDDVNAALEHAETFVFGDGDGLGQTLTKGVTAVRNAASTMVFAAIFAVYLMVDAP 212 Query: 183 SISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + L + V G I A+ GL++G + + GV Sbjct: 213 HLASYWNGVLRSLMGERGYGRFAEFRADVVFAFTGYMRGQFIDAVLVGLMVGVSLTVVGV 272 Query: 239 PSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +G+ T I +IP PI + ++ G+I + F+ + + Sbjct: 273 DFAPVIGIATGIGNLIPYIGPIVSYVLTVAVCVVNGDIGRLVVAAAVLLVIQFVDGQVIN 332 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P ++ +++ + L G R G+LG+FI AL + +++ + + Sbjct: 333 PKILSDSVEVHPILVLVALTAGGRLGGVLGMFIAVPCAALAKIYFEKFVAWRRR 386 >gi|189468268|ref|ZP_03017053.1| hypothetical protein BACINT_04664 [Bacteroides intestinalis DSM 17393] gi|189436532|gb|EDV05517.1| hypothetical protein BACINT_04664 [Bacteroides intestinalis DSM 17393] Length = 376 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 126/365 (34%), Gaps = 21/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R +I+ I++ + L G P A +I + +P+ S F K Sbjct: 1 MERKKITFDSFIRAVILGAIIIGVLMLLKRLSGVLLPFFLAWLIAYLIYPLVSFFQHKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSD 112 + +++ + + + +L M++ +K+L+ + VP LS+ Sbjct: 61 LKNRIISIFCALLTLTVIGSVAFYLLVPPMIQEFLRVKDLLIEYFSTTHTASNVPTTLSE 120 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + S L L T K + S + + + ++ Sbjct: 121 FIRQNIDLHILEQMFSQENILDALKVTVPK------LWSLISESINLLFGFFTVFLILLY 174 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F D SIS+ L + I V + F G ++A+ G++ Sbjct: 175 IVFILL-DYESISEGWAHLMPKKYRKTVTGILNDVKDGMNRYFRGQALVALCVGILFSIG 233 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIE 288 + + P + LG+ + M+P I F + ++ G+ F Sbjct: 234 FLIIDFPLAIGLGLFIGALNMVPYLQIIGFVPTIMLAILKAADTGDNFWIIIASAAAVFI 293 Query: 289 LFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + D L P ++G L L MG+LG+ I L L+ ++ I Sbjct: 294 VVQIIQDGYLVPRIMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRYI 353 Query: 347 MAIKE 351 + + Sbjct: 354 INQEN 358 >gi|325859632|ref|ZP_08172765.1| putative membrane protein [Prevotella denticola CRIS 18C-A] gi|325482912|gb|EGC85912.1| putative membrane protein [Prevotella denticola CRIS 18C-A] Length = 359 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 125/363 (34%), Gaps = 16/363 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKE- 56 M++T+ + I +I ++ + L G P A ++ + +PI K Sbjct: 1 MKQTITFDKFIRWALIALAVITVGFIINALSGALLPFFIAWLLAYLLYPIVKFVQYKLHV 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I V + LF+ + + L+ + + Sbjct: 61 PGRVLSIIITLAFVAAIITAIFLFIVPPMIDQFDRLMHVANRYLHETTHANNISAMVQRW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + + + + + C+++++M FF Sbjct: 121 VMENQFEIEKFLKSPDFTNAIKTAMPKLFS--VIGQTASIVISVIASCITLLYM----FF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++++ + +W +++ V + + + G ++++ G + + + Sbjct: 175 ILLDYETLTENWIKIFPKRVRPFWAGLAQDVERELNNYIRGQGLVSLCLGALFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELF 290 P + +GV+ I+ ++P + + L+ G F A+ Sbjct: 235 DFPMAIGMGVLIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFGSALAVFAVVQI 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL + L LI W+ + K Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGSLLGFIGLIVALPLTTLIIAYWQRYVTKEK 354 Query: 351 ENK 353 E + Sbjct: 355 EEQ 357 >gi|150017277|ref|YP_001309531.1| hypothetical protein Cbei_2417 [Clostridium beijerinckii NCIMB 8052] gi|149903742|gb|ABR34575.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 393 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 117/343 (34%), Gaps = 19/343 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE-----------SSTFLAVIATVSVMCLFIVPLL 79 P++ +II + +PI S + ++ +I V ++ +F +L Sbjct: 51 IKPLIFGIIIAYLLYPITRSIETFLKQNKLYKLEKASTRRIIAIMITYVLIIGIFSGLIL 110 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ ++ + + + + + S L + + + I Sbjct: 111 GIYFMIGGQISNNTTIINMTQHISLYLKSNSFSTESIKGTLDRLDNSFIDNIKPYIISGI 170 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ-----QLDSLGE 193 +L+ + S M + ++ + +D G+ Sbjct: 171 IYLQRYVESNLGNMTSYI-MSIGSGVATFFIALVISIYLLKDSEYFIGLWNKLYYLVFGK 229 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + R+V +V G + A G++ A + G+ +G+I I M Sbjct: 230 SILGSKIIYVFRVVHEVFAKYLRGQLLEAFFVGVLSAIALSIVGIDYAFVIGIIAGISNM 289 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G I +I L+ G + + I + L P +VG + L + T Sbjct: 290 IPYVGPIIGTILAAIMGLLSGAPIRIVYAIVAMLVVQQIDNNLLAPKIVGNSVGLHAVFT 349 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ G GLLG+ + + A V++ E +++ Sbjct: 350 MMAILIGGNVGGLLGMLLAVPVAASFKVLFNNWYENYIEKQKQ 392 >gi|325106347|ref|YP_004276001.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324975195|gb|ADY54179.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 354 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 118/353 (33%), Gaps = 25/353 (7%) Query: 1 MRETMLNP---QGIMRWMIMFIILVSLYFL-KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M +M P Q + ++ I LV + L K +P++ + + +P+ F + + Sbjct: 1 MDTSMKQPPFYQKLAMVLVALIALVYIAVLGKEVLSPLIFSFLFAILLYPLCRFFEKRCK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 ++++ + + + + L ++ W++ Sbjct: 61 LPRGLASILSVIVFLGIILGIFYLLGTQFRSLSEDWPQFKEQVIYAIDSSQDWVAKTFNI 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIA 173 + +L +L + G L L ++F I Sbjct: 121 DRSHQL----------------NYLTDAAKKLLSSSTVVIGATVLSISSILLFLVFTFIY 164 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF I L ++ + ++ V +IR +G+ I + + Sbjct: 165 TFFILLYRTLIVDFLTAVFKEKHLNIVHEVLEQVQYIIRKYLIGLMIQIVIVSTITCLVL 224 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 WL G+ LG++T I+ +IP + I A + + + Sbjct: 225 WLIGIKYAFLLGLLTGIINIIPYIGIFTAMLLSALITFATTATFSKALIVIVALIGIHAL 284 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P +VG +K+ T G+ G G+ G+F+ ++A++ +++ Sbjct: 285 DSNILLPTVVGSKVKINAFVTVLGVFIGEMIWGIPGMFLSIPIIAVMKIVFDR 337 >gi|196248998|ref|ZP_03147698.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] gi|196211874|gb|EDY06633.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] Length = 341 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 114/340 (33%), Gaps = 4/340 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW+I+ ++L + +L + P+L AL P Sbjct: 1 MRRWIIIVLLLAFVLWLLPYSVPLLLALATALLLEPSIRRLQENYRLKRVHAVTAIFTLF 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L FL + ++ L K+ V L ++S + + + Sbjct: 61 LVIVGFSLYFLIVILVQQVMALSQKLPYVFSEATKVLDELIQT-WQSYSSSIPQEIIDSL 119 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + L + + I + + + ++ALF D + Q + Sbjct: 120 ERSVNTVQQMLLSFATNLTQSLVHYIAAI-PAFFIHFLVYLVALFLICLDLPQLKQGIRR 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K + ++ + + + GV + I + Sbjct: 179 YLSERTHQRLSMVVSQLSKAGVGFIKAQFLFSLITFFLALAGLLILGVDYAALMAFIIVV 238 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P G I +I G+ L + + + +V + + P + + + Sbjct: 239 VDILPILGTGSVLVPWGIISIINGSTGLGIGLIVL-FVIITVVRRIIEPKVFSTNLGISP 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + G + +GLLG FIGPV++ L+ + K ++ Sbjct: 298 LAALVSVYLGFQILGLLGAFIGPVIVILVETLVKAGVIKW 337 >gi|218132750|ref|ZP_03461554.1| hypothetical protein BACPEC_00611 [Bacteroides pectinophilus ATCC 43243] gi|217992476|gb|EEC58479.1| hypothetical protein BACPEC_00611 [Bacteroides pectinophilus ATCC 43243] Length = 376 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 117/336 (34%), Gaps = 21/336 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--------SKKEESSTFLAVIAT 67 I + +S+ ++ AP + A + + + + T A++ Sbjct: 28 ISIAVFLSIRYILPLAAPFVLAFFLSVL---LENKVTALADTAHGRLFRGNKTAAAIVIV 84 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA----NQHGIPVPRWLSDIPGGMWASELW 123 ++ + + L Y+ + E++ L+S + H + + G+ ++ Sbjct: 85 TALTAAAAIVIGALGYFAISEIRGLISNYDYYCRMCDAHVLQACERMDGWL-GLEIGRMY 143 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + SLK + + + +AS L + +II+ + RD Sbjct: 144 GMVCNGVDSLKESFDGGRMASAMGTSFAYASAAMKKMLLLAGAFFMLIISTVYMSRD--- 200 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ F + + ++ F II +V + + G P V Sbjct: 201 MNSYRKWKKNTRFREEADVLWSALARLGNVYFKTQLIIICCTAVVCTTGLLIIGNPYAVV 260 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G+ ++ +P G SI ++ GN+++A L I F + L L+G Sbjct: 261 IGIAIGLLDALPFFGTGTVLIPWSIMAVLGGNVWHAAVLMTVYVITYFERE-ILEAKLMG 319 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + + + G+ G G +GPV LI Sbjct: 320 KGLDISPVTMMAAIYIGLLVYGFWGFVLGPVSYCLI 355 >gi|218961458|ref|YP_001741233.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] gi|167730115|emb|CAO81027.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 353 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 113/325 (34%), Gaps = 10/325 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 +F ++ A I + P S F K+ + + + + + L Sbjct: 21 FFYHPIIYYLIYAFIFSYILDPFVSWFERKRFPR-WLAVLTIYLIIAGIIALFTSRLVPA 79 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF---- 140 + + L + + Q +++ +P E + + L + + Sbjct: 80 LVQQGNNLFNILSSGEQLT---GQYIITLPFIRRIYEFLQELDAQIPGLGMAPKLIEILD 136 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + IP+ I + + FF +D + + + + + + + Sbjct: 137 QANVFLAKIPKLLIDNYKKIFSTISIIFTVPLISFFLLKDKYKLRKGIVKMFSNRYFELC 196 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + R + I + + I G++ +A + GVP + +G + +IP P Sbjct: 197 IIMMRKIDSTIGNFLRAILFEIIAVGILASTALTIVGVPYSILIGATAGVANIIPYFGPF 256 Query: 261 SFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 A+++ L G I +A + L I I + + P +VGG I + L L+ Sbjct: 257 LGGALAVVTVLFNGGTILSAITVILAMYIVQLIDNNIVYPVVVGGTINMHPLLVLLTLIA 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G G+L + I L+ L + K Sbjct: 317 GGWYGGILWMLISVPLVYLTYNLIK 341 >gi|158338720|ref|YP_001519897.1| hypothetical protein AM1_5628 [Acaryochloris marina MBIC11017] gi|158308961|gb|ABW30578.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 385 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 116/334 (34%), Gaps = 19/334 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATV 68 I+ + +L + +F ++ ++I + + +S + S +A++A Sbjct: 28 ILALNFWTLASISNYFGVLIGIIVIASLLAFLLNYPVSWCVQRGLRREPASIIVALLAIS 87 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + I+ + F L + Q I + + + + + L + Sbjct: 88 ILFGIGIILIPIAFNQAQQLANRLPDWLESGRQQLILLSQQVEERGVSLNLDVLAVQAFD 147 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q + A LD + ++ II F+ + G + L Sbjct: 148 RLQGQL--------QALTKSLLNIALGTVSSVLDILIDVLVTIILTFYLLQHGDELWDSL 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +S + ++ F+G + I VL + + VP + G+ Sbjct: 200 IDWLPE---ESQQPVSETLRSSFQNYFIGQLLFGICMTSVLVPTFLILKVPFGLLFGLTI 256 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 MA+IP G + V+ + ++ NI+ L + I+D + P ++G L Sbjct: 257 GTMALIPFGGTVGIILVTCLVTLQ-NIWLGLKLLAAAVVVQQILDNLVAPRILGTMTGLN 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 F ++ G + GL+G+ I +I Sbjct: 316 PAWVFISILIGAKAGGLIGVVIAVPTAVVIKTAL 349 >gi|29376343|ref|NP_815497.1| hypothetical protein EF1798 [Enterococcus faecalis V583] gi|227553608|ref|ZP_03983657.1| permease [Enterococcus faecalis HH22] gi|256853348|ref|ZP_05558718.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|294779172|ref|ZP_06744581.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300860743|ref|ZP_07106830.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29343806|gb|AAO81567.1| hypothetical protein EF_1798 [Enterococcus faecalis V583] gi|227177256|gb|EEI58228.1| permease [Enterococcus faecalis HH22] gi|256711807|gb|EEU26845.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|294453732|gb|EFG22125.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300849782|gb|EFK77532.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|323480953|gb|ADX80392.1| conserved hypothetical protein [Enterococcus faecalis 62] gi|327535361|gb|AEA94195.1| hypothetical protein OG1RF_11508 [Enterococcus faecalis OG1RF] Length = 384 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 126/373 (33%), Gaps = 28/373 (7%) Query: 11 IMRWMIMFIILVSLYF-------------LKGFFAPVLSALIIGFTSWPIYSSFISKK-- 55 ++R++ + ++V L G +P ++ +I + Sbjct: 12 VVRFLFVMALIVGYLLITNYQHFVHSVSGLLGILSPFITGFVIAYLLSGSQKKIEGLLER 71 Query: 56 -------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + ++ + ++ +F++ L ++ + + +L + + H + Sbjct: 72 VPLPVVKKAKHGLSVLLLYLIILFIFVLTLNYIVPLLISNLVDLANSLPTFYDHMVQFVM 131 Query: 109 WLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 L D I + L + L++ T + + FL+ L+ Sbjct: 132 SLEDKGILKTAAIEKYLNSVLKDLSPERFLNQ---WTQALFSLGTLTKNVSSFFLNAFLT 188 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +I I AL F + + L + K+ + A G Sbjct: 189 LIISIYALVFKQSILTFVEKAAHKLLSEKVYKQTQTWLNTTNKIFYKFISCQFLDACIIG 248 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + V V LG++ I MIP G+ + + L G + A + L Sbjct: 249 VSSTILLSILNVKFAVTLGILLGICNMIPYFGSIFASIVAGVITLFTGGVTQAITVLLVL 308 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I I + P ++G + + + + G G+LG+F+ + A+I +I E Sbjct: 309 LILQQIDGNIIGPRIMGDALNVNPILIIVSITIGGAYFGVLGMFLAVPVAAIIKIIVSEW 368 Query: 346 IMAIKENKEKISS 358 + KEN + + S Sbjct: 369 LNESKENDKIVDS 381 >gi|86142667|ref|ZP_01061106.1| permease [Leeuwenhoekiella blandensis MED217] gi|85830699|gb|EAQ49157.1| permease [Leeuwenhoekiella blandensis MED217] Length = 367 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 117/343 (34%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ LY ++ + A +I P+ + + + + A+ + V+C+ Sbjct: 22 IVFVIWFLYQIQAVLIFICIAAVISLIGRPVVNFLKHQCKFGAVAAAITTLLMVICVISG 81 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + + +H I G+ L + Sbjct: 82 ILALFIPILIDQSEHISKINFEEVKHNINRLNVEFSRAMGVDQVTLIE---------GLK 132 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F+K I IP F + F + ++ +I FF +D + Sbjct: 133 QSDFIKNFDISVIPTFINSILGNFSSLIVGLLSVIFISFFLLKDSHLLLDSFLVFANTGE 192 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ +++ FLG+ + + + +P+ A+ + A++ ++P Sbjct: 193 ERRFRRVFHKTKQLLSRYFLGILLQLMILFTIYAILLVSFQIPNAFAIALFCAMLNVVPY 252 Query: 257 GAPISFTAVSIYLLIKGNIFN--------ATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 P+ V + L+I GN G ++D + +P + G +K Sbjct: 253 IGPVVGGVVMMLLVISGNFTADFQEVILPKMIYVFIGYCIAQLIDNFINQPLIFGSSVKS 312 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F +V G+ G+ + I VI KE + K Sbjct: 313 HPLEIFLVIVIAGLIFGIFGMVVAIPAYTAIKVIAKEFLSEYK 355 >gi|227501244|ref|ZP_03931293.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227216645|gb|EEI82049.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 405 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 113/342 (33%), Gaps = 19/342 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-------------FLAVI 65 ++L + + ++ A II + + + ++ Sbjct: 37 LLLGAYSVFRPIMYGLVIAFIINLPMNFFQEKLFGRLIDKNKHRTLVLALSLSLSWIIFF 96 Query: 66 ATVSVMCLFIVP-LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++M +P L+ + + + K++ + + +++ + ++ Sbjct: 97 GLFTIMLTVFIPELVAAISSLIDNIPVFMDKLIEYLNNQKLFNQIAAEVINKLNKLDI-E 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 SL + L + F+S + + + SI + RDG Sbjct: 156 NITKDITSLVNGKDMGLLSKTSSLFNSFSSWLMSVIMGFFFSIYVSMNKKA--LRDGS-- 211 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + + + +++ F + + G + L +P + Sbjct: 212 NKLFYANFDDKTVEHINYFAKLTYDSFSRFFETKLLSCLSIGTICFIGMLLLKLPMAGMI 271 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ +IP P+ T + + L+ + A ++ + +K L P ++G Sbjct: 272 AILVGAFDIIPYFGPLIATGIGVILIFIQSPSQALVFLVFVLAIQQLQEKILYPLVIGKR 331 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + F + G G++G+ + +I + +++I Sbjct: 332 QGLPAIWIFISVFIGAGLFGIVGMVTSMPIATVIYNLIQDNI 373 >gi|108763996|ref|YP_635383.1| hypothetical protein MXAN_7270 [Myxococcus xanthus DK 1622] gi|108467876|gb|ABF93061.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 396 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 8/212 (3%) Query: 141 LKTNGIDFIPRFASRFGMIFL-------DYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L G+DF+ R L + + LFFF +D + + + Sbjct: 166 LFEKGLDFLKSNLGRITTGVLAGANFAAQAVAGGLLTVTLLFFFVKDTERLGGWVLARVS 225 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + G+ I+A+ + + +G+ + GVP + L +T + Sbjct: 226 PSRRDTVRAVGLRAWGTLSGYLRGVVIVALVDAVGIGAGLAIIGVPLVLPLAALTFVGGF 285 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P GA ++ + LI +A + + L P ++G + L + Sbjct: 286 FPVIGATLAGVVAVLVALITNGPLDALLVLAVVLGVQQLESNVLEPVVMGRAVPLHPVVI 345 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G G+ G F+ + A+++ E Sbjct: 346 LLSITAGGVLFGVAGAFLSVPVAAVLSAAGNE 377 >gi|146300706|ref|YP_001195297.1| hypothetical protein Fjoh_2957 [Flavobacterium johnsoniae UW101] gi|146155124|gb|ABQ05978.1| protein of unknown function UPF0118 [Flavobacterium johnsoniae UW101] Length = 366 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 131/352 (37%), Gaps = 24/352 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + P I+ ++ Y K PVL A + PI++ +K + Sbjct: 1 MTQPLKLPFYAKLACILVSLISFAYIFCIAKDILTPVLLAFLFAVLLLPIFTFLNTKLKF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A+I + + L+F+ Y + + AN I + +++ + Sbjct: 61 PRHLAAIICMAVFLSFIVGILVFISYQVTYMANDFDTIKKNANSFIIEIHKFIRE----- 115 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL---DYCLSIIFMIIAL 174 + + + +L + D + ++ G + D L +II Sbjct: 116 -----------NFEISIGDQKKYLDSVTKDSVKNGQAKLGSAIISISDVLLDSTIIIIYT 164 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F F L L + K I + I + + + I I ++ G W Sbjct: 165 FLFLIYKEHFKLFLAKLISKENHSVLKDILSQIKVSINNYIVSLIIEMIVVSVLTGLGLW 224 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIV 292 + G+ + LG+IT I+ +IP + +++ + G+ I + + I FI Sbjct: 225 IIGIKYFILLGLITGILNLIPYIGILVAGIITVLASLTGSAEISMILGILIVNIIVQFID 284 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L P ++ +++ + G++ G G+ G+F+ L+A++ +I+ Sbjct: 285 NNLLVPLIINTKVEINAFVSIMGIIVGGAAAGISGMFLAIPLLAILKIIFDR 336 >gi|225874023|ref|YP_002755482.1| hypothetical protein ACP_2444 [Acidobacterium capsulatum ATCC 51196] gi|225792597|gb|ACO32687.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 642 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 102/363 (28%), Gaps = 38/363 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ +LYF + F P+ ALI+ F P+ + T ++ + + Sbjct: 22 LALVIAALYFGRDIFIPLAMALILSFLLTPLAERVEHRLHLRRTPSVILVAIVAFGCMAI 81 Query: 77 PLLFLFYYG----------------------------MLEMKELVSKVVLANQHGIPVPR 108 + + + + ++ A G P P Sbjct: 82 IGWVVAAQLLTVVDALPNYRDNIQAKIDAIHAPAKGPVAQAVRSIQEISNALSSGAPQPA 141 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP-----RFASRFGMIFLDY 163 ++ + L+ S+ + + G I L Sbjct: 142 PAPEVQLPSFRRMTRADLEKEILRLQAESQANTNKGPTPVMVVSPPVSETAYLGTILLPV 201 Query: 164 CLSIIF---MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + M++ + + ++ L + + I + Sbjct: 202 VKPLGILAAMLVFTVYMLLRREDLRNRVLLLAGVGHINVMSQALNDAAERISRYLRMNVL 261 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNA 278 + G G V+G +L VP+ GV+ +M ++P G L + ++ Sbjct: 262 VNAGFGAVVGIGLYLLHVPNATLWGVLVGLMRLVPYFGIWAAGSVTFIFTLAVFPGWWHP 321 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + ++ P+ G + L + G GL + L + Sbjct: 322 LFVAMMLVAIELLISNFFEPWFYGSHTGVSSLALLVSAIVWTILWGWAGLILSTPLTVCL 381 Query: 339 AVI 341 VI Sbjct: 382 IVI 384 >gi|116611251|gb|ABK03975.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24] Length = 371 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 106/320 (33%), Gaps = 11/320 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +++AL I P+ +K I + + + + + F + + Sbjct: 63 IVTALFIALGLDPVVRWLEGRKLPRP-----IGILVSVTVLVSAVAGFFATLIPTI---- 113 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 V Q PRW+ D + + + + + L + + + I Sbjct: 114 --VQQVTQVVQEAPRWIQDFIDSDFFRSVDDQFGVRERITQELEKFVNNPDAMGGIFGGV 171 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 FG + + +++ +F ++ + L A + +S + + + Sbjct: 172 VGFGSTVANGLFGTLIVLVLSLYFLAALPAMKKWGYRLAPRSRRARVEALSEEITGSVGN 231 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G +A+ + GVP V L + A++A IP + + + + Sbjct: 232 YVIGQACVALLNATFAFIVMSIVGVPFAVLLAFVVALLAFIPLVGGMIAGVLVTLIALTA 291 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + L + P ++ + +P ++ G +G+LG I Sbjct: 292 GWQTALVYAICYFAYLQFEAYFISPRIMQKAVAVPGAVAVISVIAGGSLLGVLGALIAIP 351 Query: 334 LMALIAVIWKESIMAIKENK 353 A + ++ KE + ++ Sbjct: 352 TAAAVMLLVKEIFIVRQDKH 371 >gi|301155545|emb|CBW15013.1| predicted inner membrane protein [Haemophilus parainfluenzae T3T1] Length = 348 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 114/343 (33%), Gaps = 11/343 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +++YF AP+L A+++ + + K + Sbjct: 11 RRLSDPQAMGLLAILLFGFIAIYFFSDLIAPLLIAIVLAYLLEMPINFLTKKLKFPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + L ++ L + L+S + + WL +P Sbjct: 71 TLVIFGGFLTLALLVFFGLVPTLWNQTISLLSDLPAMFNK---LHEWLLALPEHYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +T + + + F ++ I M + + + + +FF +D Sbjct: 128 YTMIDTFFSAARAKILGFGESAVKLSITSL-----MNLVSLGIYAFLVPLMMFFMLKDKT 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + K+ + + I + G + + G+V + G+ + Sbjct: 183 ELLAGVSRFLPK-NRLLASKVWNEMQQQIANYIHGKLLEILIVGVVTYIIFLSFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L V + ++P GA + V++ + + I + ++D L P+L Sbjct: 242 LLSVAVGLSVLVPYIGAVLVTIPVALVAMFQFGISPTFWYLIVAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L L ++ G G+F L L+ + Sbjct: 302 FSEVVNLHPLVIIISVLIFGGLWGFWGVFFAIPLATLVKAVLN 344 >gi|302558676|ref|ZP_07311018.1| integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302476294|gb|EFL39387.1| integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 447 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 106/318 (33%), Gaps = 19/318 (5%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES---STFLAVIATVSV 70 + ++ +++ L + V + A + + +++ + + Sbjct: 115 LLVLAGTVWVLMRIISAVQLVVLAFVASLLITALLQPTVARLRRYGVPRGPATALTALFG 174 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ + M + L ++ + WL + P + ++ + Sbjct: 175 FVVIGLIGWFVTWQVMENIDHLAGQIQDGIDE---LRNWLLNSPFHVTDKQINEIAKNLR 231 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ +E + ++ I+ + + F DG I + Sbjct: 232 EAVGANTEQITSAGLEGV---------TVVVEALTGILLAVFSTLFLLYDGKRIWEWSLK 282 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + G I+A+ + + +G + VP V L V + Sbjct: 283 LVPAAARPGVAGAGPAAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFIFL 342 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP + A+++ + L+ +F + + I L+PF++G +++ Sbjct: 343 FSFIPLVGAVVSGALAVVVGLVTQGVFTGVMVLVVVLAVQQIEGHILQPFILGRAVRVHP 402 Query: 310 LPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 403 LAVVLAVASGGMVAGIGG 420 >gi|260588950|ref|ZP_05854863.1| putative membrane protein [Blautia hansenii DSM 20583] gi|260540729|gb|EEX21298.1| putative membrane protein [Blautia hansenii DSM 20583] Length = 379 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 116/334 (34%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F A I+ + SK + + L + + LF+V +L++ Sbjct: 41 IVFPFLLGAAMAFILNVPMSFMEKRLFSKTKGKAKKLKRPICLVLAILFVVAILWIVLLV 100 Query: 86 ML--EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ + S V I + RW DI E+W L I + Sbjct: 101 VIPEVASTVASLSVNIEAALIKLQRWAMDIFEDNKQIEVWIASLQFDWDGIIHTAFGFLK 160 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK-- 201 NG + ++ ++ + + ++ Q+ + F Sbjct: 161 NGAGNVLNSTMTVAKTVINSVMNFCVAFVFACYILLQKEKLAVQIRKILYAFFSKKVVTK 220 Query: 202 --KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I+ + K + G A+ G + + + P + +GV+ A A+IP Sbjct: 221 VLDIASLSYKTFANFVTGQCCEAVILGTMFFISMSILRFPYALLVGVLIAFTALIPIFGA 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + +L++ + A + + + + P +VGG + LP + + G Sbjct: 281 FIGCFLGTFLILVADPMKAIAFVILFLVLQQVEGNLIYPHVVGGSVGLPSIWVLVAVTVG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 MG++G+ + + +++ +++E + + + Sbjct: 341 GSLMGIVGMLVFIPICSVLYALFREMVYKRLKER 374 >gi|212634763|ref|YP_002311288.1| hypothetical protein swp_1944 [Shewanella piezotolerans WP3] gi|212556247|gb|ACJ28701.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 360 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 107/323 (33%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + ++ I P+ + K LAV+ + Sbjct: 12 KGFAISAFIVVILAGIKTASPIVVPFVLSVFIAVICNPVINWLTRHKAPR--GLAVLMLM 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L L + E + + W Sbjct: 70 VFIVLMGLWLASLVGTSINEFSKQLPFYRDQLIEQFS-----------------WIVDKL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++I E L + ++ +I+ + F + S+++ Sbjct: 113 AALNIQISKEQILAYFDPGIALSMTTNMLTGVGSVMANLFLIILTVVFMLFESNGFSRKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L K+I R + V + + ++++G G ++G ++ GV + GVI Sbjct: 173 -HLALDDPDMRLKQIDRFLHSVNQYMVIKT-LVSLGTGFIVGLGLYIIGVDYALLWGVIA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A + L I+ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVLLAFIQIGPGAAGAVALLYLGTNTIMGNVVEPRYMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLL 313 >gi|160938088|ref|ZP_02085445.1| hypothetical protein CLOBOL_02983 [Clostridium bolteae ATCC BAA-613] gi|158439082|gb|EDP16837.1| hypothetical protein CLOBOL_02983 [Clostridium bolteae ATCC BAA-613] Length = 415 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 112/343 (32%), Gaps = 21/343 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVMCLFIVPLL 79 P++ ++ + PIY+ E + T+ + L I + Sbjct: 47 LMPIIYGAVLAYLMLPIYNKTRVYTTEKLKRCIKDGHTADSLAKAAGTLVSLLLLIAIVC 106 Query: 80 FLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 LF+ + ++ ++ ++ + WL + E + + + Sbjct: 107 GLFWMVIPQIYTSIIGLQESLGENINNLSLWLMKMFEDNPTIE--QTIMPFYEQAATEFQ 164 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +L T+ + + + L +I+ +I + +F ++S Q + L Sbjct: 165 NWLTTDLVPNMSKIIGELSTGLLSVVTVVKNILIGVIVMVYFLNIKDTLSAQSKKIVYSL 224 Query: 196 FPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 R V G + ++ G++ A +P + + VI + Sbjct: 225 LKLKDANRLVSEVRFAHSVFGGFITGKLLDSLIIGIMCFFAMQFLKMPYVLLVSVIIGVT 284 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P S +L++ + ++ + L P ++G LP Sbjct: 285 NVIPFFGPFIGAVPSAFLILLVSPMKCLYFLIFILVLQQFDGNILGPKILGDSTGLPSFW 344 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F ++ G +G+ I L A+I + + + K+ Sbjct: 345 VLFSILLFGGLFGFVGMIIAVPLFAVIYRLTATYVSSALRKKD 387 >gi|86605937|ref|YP_474700.1| hypothetical protein CYA_1254 [Synechococcus sp. JA-3-3Ab] gi|86554479|gb|ABC99437.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 412 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 119/299 (39%), Gaps = 9/299 (3%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGM 117 +L V+ +S + L + + + + L++++ + + W++D+ G Sbjct: 59 PRWLGVVVYLSFIAGIAGLALLMGPTVVTQTQRLLARLPSYLERLQLLADTWIADLAGVD 118 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 A+ + L PQSL + + + F L L+++ + + Sbjct: 119 PAALDYLNQLLDPQSLMNWA-----VRSGQQLLVQSFDFTRGLLGGLLTVVLTLFISGYM 173 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + Q L L + + + + + + + G +++ G+++ + G Sbjct: 174 LVSGSDLVQGLVELFPYPWNERLAQQVQPMAQRMGGYIQGRVLVSAILGVMIAVSLRFLG 233 Query: 238 V-PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + +ALGVI +IP G + + +++G L L+ + Sbjct: 234 LSEFALALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILY-VAVQNLETYV 292 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L P LVG +++ L ++GG + +G++G I P +A +AV+ + + K+ E Sbjct: 293 LDPLLVGSSVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYLKPKQEAE 351 >gi|114047909|ref|YP_738459.1| hypothetical protein Shewmr7_2417 [Shewanella sp. MR-7] gi|113889351|gb|ABI43402.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 366 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 12/303 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + V + + ++ L + L++ + G+ Sbjct: 54 WPVAQML--KLGINRTTGASLVLVLFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L+ +SE + + L T + I + + L Sbjct: 112 QTLQGLATQYPQFVSSEQLNL-------MVAELKKLLDTQHLLDIAKQLIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVI 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + G+ LGV+T + +IP GA + +++ + + + Sbjct: 224 VGVASYIFFAFMGLRYSALLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KES 345 Sbjct: 344 NAW 346 >gi|89075007|ref|ZP_01161452.1| putative permease PerM [Photobacterium sp. SKA34] gi|89049246|gb|EAR54810.1| putative permease PerM [Photobacterium sp. SKA34] Length = 361 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 118/339 (34%), Gaps = 14/339 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + +I+ +++YFL P+L A+++ + WP+ ++K T I Sbjct: 15 DPHAVSLVVILLGGFLTIYFLGSLITPLLVAIVLAYLLEWPVAR--LNKLGMPRTLSVAI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L ++ L L ++ L + V + ++S +P + Sbjct: 73 VLLVFASLMVLALFGLVPTIWHQITNLSADVPKMFN---DLQIYVSSLPERYPDFVQPAQ 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +L+ ++ + S + +I + + +FF +D + Sbjct: 130 VVDLMNTLREKVLGLGESVVKGSLASLVS-----LATIGVYLILVPLLVFFLLKDKDEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ K+ + + I + G I G+ + + + V L Sbjct: 185 RTLLNVLPK-NRRLASKVGSEMNQQISNYIRGKVTEIIIVGIASYVTFEVMDLRYAVLLS 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + +IP GA V++ L + L L I + L P L Sbjct: 244 VLVGLSVLIPYIGAAAVTVPVAMVGLFQWGWTPDFWWLLLAYGIIQMLDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|222150878|ref|YP_002560031.1| hypothetical protein MCCL_0628 [Macrococcus caseolyticus JCSC5402] gi|222120000|dbj|BAH17335.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 376 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 103/321 (32%), Gaps = 14/321 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+L + + P K+ + +++ + + F+ + Sbjct: 53 PLLLGGFLYYIVVPFQDKLEEKRHLKRWQSVTLIMIALCLIIGLLFSFVGPIVSKQTNNF 112 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG--IDFIP 150 + + + S + P+++K ++ I Sbjct: 113 IHNYPAIQRE------------FQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV 160 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A F F+ +I + L + +D + + + + + + K Sbjct: 161 TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKT 220 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +RS G ++I GL+L + Y + G+ V L + + +IP P +I + Sbjct: 221 LRSYIQGQVTVSIILGLLLLAGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIA 280 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + + + + P ++G + + L ++ G + + Sbjct: 281 LIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPLTIITVILAAGNLGGFFAILV 340 Query: 331 GPVLMALIAVIWKESIMAIKE 351 A++ I + M +E Sbjct: 341 AVPTYAVLKTIVRNFYMHRQE 361 >gi|163851489|ref|YP_001639532.1| hypothetical protein Mext_2065 [Methylobacterium extorquens PA1] gi|218530296|ref|YP_002421112.1| hypothetical protein Mchl_2339 [Methylobacterium chloromethanicum CM4] gi|163663094|gb|ABY30461.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] gi|218522599|gb|ACK83184.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 370 Score = 78.3 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 106/310 (34%), Gaps = 14/310 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +++ LY L+ P ++ L + + P+ + AT+ ++ F+ Sbjct: 11 ILAVVVFLLYELREVMLPFVAGLALAYLLDPLADRLERLGLGR-----LAATLLILAGFV 65 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + L + ++ +V + + + + G + + + L+ Sbjct: 66 VGFVVLLIIVVPLAAGQIASLVNSLPTMVGRLQSILVERAGPLLQRIGGTEVVN--ELQS 123 Query: 136 LSETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + G F+ S + + ++ + F+ D + LD Sbjct: 124 SVGTLVGQGGAWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIAALDGWVP 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++++ + + G +++ + G +L G+ V +G+I+ + Sbjct: 184 PRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMISGFLTF 243 Query: 254 IPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP G +S + G+ + + F+ + P LVG + L Sbjct: 244 IPYVGTLTGFLLSVGVALVQWWPSGDWLHIGLTVGVFLVGQFLEGNVISPKLVGDSVGLH 303 Query: 309 FLPTFFGLVG 318 + F L+ Sbjct: 304 PVWLMFALLA 313 >gi|296114291|ref|ZP_06832945.1| hypothetical protein GXY_00868 [Gluconacetobacter hansenii ATCC 23769] gi|295979052|gb|EFG85776.1| hypothetical protein GXY_00868 [Gluconacetobacter hansenii ATCC 23769] Length = 425 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 113/356 (31%), Gaps = 19/356 (5%) Query: 1 MRETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR T ++ + ++ + + +LYF P++ AL++ K + Sbjct: 32 MRHTRMDLKTACLLVLCILAVFYTLYFAASIILPMILALVVNLLLSSPMRFLHLKLKLPK 91 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--------- 110 A++ + V + + + + + A +L Sbjct: 92 PLAALVLILGVFGVV----GAIGTAISVPAAGWIERAPEAMNALGERLAFLRGPIHLLNT 147 Query: 111 --SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + I M + H + F S + + Sbjct: 148 ASARIESFMNIAGSHLDHATKAGGDDAEHIVMSTAPASGGFDSFGSSLLLGTRAFVGQFF 207 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGL 227 MI+ LFF G S+ ++ + +I+ + + + +TII GL Sbjct: 208 TMILMLFFLLAQGDSLLRRFVEIMPTFADKRRTVQIAYQIERNVSLYLATITIINFLVGL 267 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWG 285 WL G+P+ + GV+ ++ IP P+ + L ++ AT Sbjct: 268 ANMLQCWLLGMPNPLLWGVMAFLLNYIPIIGPMMGITIYFLVGLFTFPSVLQATLPPAIY 327 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P ++ L + L+ G+ G F+ L+A+ +I Sbjct: 328 LCIHLTEGETITPMVLARRFTLNPVLVMGSLMFWDWLWGIGGAFLSVPLLAVFKII 383 >gi|323492363|ref|ZP_08097516.1| hypothetical protein VIBR0546_11014 [Vibrio brasiliensis LMG 20546] gi|323313410|gb|EGA66521.1| hypothetical protein VIBR0546_11014 [Vibrio brasiliensis LMG 20546] Length = 354 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 121/350 (34%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ +S+ T ++ Sbjct: 15 DPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVVQ--MSRLGIPRTLAVIL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L IV + L ++ L++ + I + +++++P E + Sbjct: 73 VILGFTSLMIVAIFGLVPTIWQQVGNLINDIPTMY---IGLQGFIAELPQRFPELEHFQI 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + K + +T + S + +I + + +FF +D + Sbjct: 130 VEPLVTNAKNQAIGMGETVVKGSLASLVS-----LATLGVYLILVPLLVFFLLKDKDEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + L + V L Sbjct: 185 EMASGVLPR-NRRLATKVWHEMNEQISNYIRGKVMEILIVGGVSYITFALLDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W +E Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHEEETP 353 >gi|303229262|ref|ZP_07316057.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] gi|303231297|ref|ZP_07318033.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302514027|gb|EFL56033.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302516035|gb|EFL57982.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] Length = 373 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 116/335 (34%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ + F + + L++I + + L + + + Sbjct: 41 FVPLIVGACMAFVLDILVVRYERWLWPHIKSGWRYKIRRPLSIILSFVTISLIVYFIARM 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ L+ V A Q + +W+ + + + T + + Sbjct: 101 AVPQLVHSITLI--VSAAPQLYLDFQQWIYHLSNTVPLASNPTVLNTLNGESIVNYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G ++ ++ L +IF I L R + L + + Sbjct: 159 GTKGGTYVVNTMGTILSWTVNIALGLIFAIYMLLDKERLMSQGKRILKAYASDTWVNRVT 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++++ + S F+G I A+ G+++G W+ + + + + +IP Sbjct: 219 YVAKVAVQTFSSFFVGQFIDALILGIMVGVTLWICNISYATTIACVIGLTGLIPLVGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 279 GGLMGAVILLTISPMDALIYVIILEVLHQIESNVIYPKIVGNSVGLPGLWVFAAVIIGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMIIGVPLVATCYKLLMTDVEERLASNEGL 373 >gi|328880350|emb|CCA53589.1| integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 371 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 122/354 (34%), Gaps = 17/354 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ + V+L+ + ++ P++ AL + +WP+ + F+ + A Sbjct: 21 SAEALLVALMAGVALWIVGRMWSVVWPLVVALFLTTLTWPL-TRFLRRHGWPPAVAAGAV 79 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TVS + L + + + EL VV Q + W + P + E+ Sbjct: 80 TVSFVLLVAGIVALIAVPVASQSGELSRGVVEGIQR---LREWAAGPPLNIGEDEISGAL 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + ++ + + ++ + +FFF +DG Sbjct: 137 DTAMARVQDSVGSMVTAVATGV---------GTVFSGLVTAFLALFLMFFFLKDGPRFVP 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + + + I + +++G W+ VP + L V Sbjct: 188 WLTRQLPGRLAVDVPVVVERSWYTLGAFVRSQAFVGILDAVLIGLGLWILDVPLVLPLAV 247 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + A +P GA + + L+ + +A + + + +P + + Sbjct: 248 LTFVSAFVPIVGALFAGLVAVLIALVSNGVTDALIVLAVIVVVQQLEGNVFQPMIQSRGL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G + + AL+AV+W + E+ + S+ Sbjct: 308 GLHAAVVLLAVTLGGSLAGIVGSLLAVPVAALVAVVWNYLREQLGEDSPEPESD 361 >gi|226310975|ref|YP_002770869.1| hypothetical protein BBR47_13880 [Brevibacillus brevis NBRC 100599] gi|226093923|dbj|BAH42365.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 376 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 4/231 (1%) Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + L+ I + T + N I + + + I+ FF Sbjct: 135 QLDQGYQEKLASTVGSAISTITNVGQNLIVKFLDGLKNLLLSLPNMATVSVISIMGAFFI 194 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + L + +I + + + ++ + Sbjct: 195 SKDFSLWEARARRLLPTGVNSRLDQIFIDLRNALFGFVKAQLTLISLTAAIVIIGLLVMR 254 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKT 295 V + +G+IT ++ ++P G F IY+ KGN L L+G + +F + Sbjct: 255 VEYAITIGLITGLVDLLPYLGTGTVFVPWIIYMFFKGNYTMVIGLSILYGVVLIFR--QI 312 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P +V + L L T L G++ G LGL IGPV + +I + K ++ Sbjct: 313 IEPKVVAENVGLDPLLTLVALFVGLQLFGFLGLIIGPVSLVMINALVKANV 363 >gi|317049091|ref|YP_004116739.1| hypothetical protein Pat9b_2883 [Pantoea sp. At-9b] gi|316950708|gb|ADU70183.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 352 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 125/352 (35%), Gaps = 18/352 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ I I+ + L+F G AP+L A+++ + WP + + S T Sbjct: 10 RRRFSDPQAIGLVAILLAAFLILFFFSGLLAPLLVAVVLAYLLEWPTVR--LERVGCSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + I V + +V +L + + L +P L+ + Sbjct: 68 WASSIVLVLFGGIVLVMVLIVAPVAWQQGINLTR----------DLPNMLNKLYLFAAGL 117 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + I+ E T + + +++ + + + ++ + + +FF Sbjct: 118 PKRYPALVDAGIIDIVVENLRSRLTGLGESLVKYSLASLVGLMTLMIYLVLVPLMVFFLL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + + + + + I + G + + G+V A+ L G+ Sbjct: 178 KDKEQMLNAVRRVLPRNRGLAGV-VWQEMNQQITNYIRGKVLEMVAVGVVSWLAFLLLGL 236 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + L V+ + +IP GA + V + L G + +F+ + + L Sbjct: 237 NYALLLAVLVGVSVLIPYIGAMLVTIPVIGVGLFQWGLGSDFWTMFVVYLVVQGLDGNIL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P L + L L +V G G+F L LI + + Sbjct: 297 VPILFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVRAWPEE 348 >gi|300866882|ref|ZP_07111557.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335132|emb|CBN56719.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 354 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 129/323 (39%), Gaps = 19/323 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++L+ + + ++A ++ F +P++ F+ + V+ + + +V Sbjct: 26 LLLLVFEYFRSLITVFVTATVLSFLLDYPVH--FLRRYGVKRQQAVVLVLCLFLLILVVL 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + ++ ELV+++ P W++ W K+ + P L+ + Sbjct: 84 AVTLAPIILGQLNELVTRL----------PSWINSGAEQFETLHNWAKNRNLPIDLRGFA 133 Query: 138 ETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + I + L ++ ++ F+ G + L Sbjct: 134 KQLSERFSTQLQSIIGQILTVVLGAAGSLLDLMITVVLTFYLLLHGQRLWDGLFQWFP-- 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 P +I + + ++ F+G +A GL + A+ + VP + G+ IM +IP Sbjct: 192 -PELGSQIRESLRRNFQNYFIGQATLATFMGLSMTVAFLILQVPFGLLFGLAVGIMTLIP 250 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA +S + VS+ + + N + + + +++ + P L+GG L + F Sbjct: 251 LGAGLSISIVSLLMALN-NFWLGMKVLAVATVLDQVIENGIAPRLLGGFTGLNPVWIFIS 309 Query: 316 LVGGVRTMGLLGLFIGPVLMALI 338 L+ + GL+GL + + I Sbjct: 310 LLIATKVGGLIGLLVAVPIAGFI 332 >gi|167768068|ref|ZP_02440121.1| hypothetical protein CLOSS21_02612 [Clostridium sp. SS2/1] gi|167710397|gb|EDS20976.1| hypothetical protein CLOSS21_02612 [Clostridium sp. SS2/1] Length = 375 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 106/324 (32%), Gaps = 6/324 (1%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL-FLFYYGML 87 F A II K ++ L++I + + I+ + + + Sbjct: 44 PFILGSCVAFIINVPMSFFERKLFYKLKKGKRSLSLIMAIVSIVGVILLVSRLIIPELVD 103 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +L + + + + + + + TFL+ Sbjct: 104 TIFKLSNNIPEYVKEIQALLE--KTSMNKPMVHKYVNQITFDWDKISGELITFLQDGATS 161 Query: 148 FIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S + + L +F + AL + + + L + Y ++ Sbjct: 162 MLNSTVSAITDVVQFIVSFALGFVFALNALLQKEKLSMQVKKVLVAFLPERVAKYIVRVG 221 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R+ S G + A+ G ++ ++ L G+P V + V +M++IP Sbjct: 222 RLSNNAFSSFLSGQCLEAVILGCLIFASMKLLGLPYAVLIAVFIGVMSLIPIIGGFIGCW 281 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V + L+ + A + + + P +VG + LP + + G G Sbjct: 282 VGVLLIFMVDWKQAIIFIIMFVVVQQFEGNVIYPHVVGNSVGLPAIWVLVAVTIGGNIAG 341 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 ++G+ +++ ++ E + Sbjct: 342 IVGMIFSIPFCSVLYQLFSEIVNK 365 >gi|229006725|ref|ZP_04164359.1| hypothetical protein bmyco0002_36270 [Bacillus mycoides Rock1-4] gi|228754586|gb|EEM03997.1| hypothetical protein bmyco0002_36270 [Bacillus mycoides Rock1-4] Length = 315 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 112/311 (36%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ L Y Sbjct: 6 ITPFLIACFIAYLLHPLIEKLYKEGMPR--------TLAILLIYILFFGGLGYGIYKGTP 57 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +++++ N+ P+++ M T + K+ I + Sbjct: 58 VVIAQLQEINK---QFPQFMKMYDSWMDGVTEQTDNFPSFIHEKVKQIFVGIEMKIQALL 114 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D + + + +++ + K Sbjct: 115 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHVFWKFVPSKWRSTGQVLAKEIDKS 174 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 175 LGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIVGVTDIIPYFGPILGAIPTLMIA 234 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 235 ATVSTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEIGGIVGLLI 294 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 295 AVPILAVIRTV 305 >gi|188579575|ref|YP_001923020.1| hypothetical protein Mpop_0304 [Methylobacterium populi BJ001] gi|179343073|gb|ACB78485.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 650 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 109/351 (31%), Gaps = 16/351 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LY+ + F P++ A+++ F P+ SF+ + +IA + Sbjct: 22 RGLLTLAVGVVVIAALYYGREVFIPLVLAILLSFVLAPV-VSFLRRMYLGRVPSVIIAVL 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L +L Q + L + H + Sbjct: 81 LALSIILGIGAVLGTQVASLATDLPRYQTTVQQKLSGLQEGLLGRANALLQRINHQVHDA 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRF-------------ASRFGMIFLDYCLSIIFMIIALF 175 ++ + G + A ++ ++ +++ + Sbjct: 141 SQKASAAGTTAERSVGGETPKAQLVRVQEPDPSPLTLAHNILGPIVEPLTTVGIVLVVVV 200 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + +L L + + FL + G+++G W Sbjct: 201 FLLMQREDLRNRLIRLFGSRDLHRTTVAMDDAASRLGTYFLAQLGMNAAFGVLIGLGLWA 260 Query: 236 AGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GVPS + GV +A+M +P V++ + A I + Sbjct: 261 IGVPSPILWGVFSALMRFVPYIGAFISGLLPVALAAAVDPGWSMAIWTAALFLIAEPLFG 320 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P L G L + G +GL + + V+ + Sbjct: 321 HVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPVGLILATPFTVCLVVLGRH 371 >gi|160933907|ref|ZP_02081294.1| hypothetical protein CLOLEP_02769 [Clostridium leptum DSM 753] gi|156866580|gb|EDO59952.1| hypothetical protein CLOLEP_02769 [Clostridium leptum DSM 753] Length = 420 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 115/350 (32%), Gaps = 12/350 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-------WPIYSSFISKKEE--SSTFLAVIATVS 69 I ++ FF + A ++ + + + + ++ ++ Sbjct: 45 FITGAISLAAPFFIGIAIAFVVNVLLKFYEEKAFAFLNKRNGRIWKKIRRGVCIFLSFLT 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +LF+ + +K L + + + ++ L Sbjct: 105 FVLVIGGIILFVVPELVNSVKVLTDNAPSYINRLMQET---TKLLEKWNVTQEQINALKL 161 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + T + TN + + +S IF + L + ++ + + Sbjct: 162 DWSSILTQATQVTTNFMGSVFNITVNVANGIFIMAMSFIFCMYMLVNKEKLTTNLKRVMY 221 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + K+ + G A ++ + +P + + I A Sbjct: 222 AYLPNRVAKRTIDVAILSNKIFSNFVRGQLTEACIWFFLIYLGMTVLRLPYALLISAIVA 281 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++IP P + ++L+ N ++ ++ I I + P +VG I LP Sbjct: 282 LCSLIPIIGPYISMFTAGFILLLVNPWHTLTYLIFFLILQQIEGNLIYPRVVGTSIGLPG 341 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + ++ G++G+ +G ++I + + A K + Sbjct: 342 IWVLLAIILCGNLFGMVGILLGIPTFSVIYTLLRGDTSARLRKKRLTTEQ 391 >gi|145299611|ref|YP_001142452.1| permease PerM [Aeromonas salmonicida subsp. salmonicida A449] gi|142852383|gb|ABO90704.1| permease PerM [Aeromonas salmonicida subsp. salmonicida A449] Length = 356 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 114/342 (33%), Gaps = 14/342 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++++ L+ G AP+L AL++ + WP+ + + S + Sbjct: 15 DPDAVTLFLLLVACFAVLWLFGGLLAPLLVALVMAYLLEWPVSR--LQRAGLSRALATSL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + ++ LL L + + L + H R L + + L Sbjct: 73 VLLLFIAVTVMALLGLIPTLVSQGINLAKESPSMLAHVQDYVRTLPEKYPEVIDVTLVET 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + L + + + + + +I + + +FF +D + Sbjct: 133 IIDNIRQRILSGGEHLVSASLSSLV--------NVVAILIYLILVPLMVFFMLKDKQELM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + ++I + G I + G+ + L G+ L Sbjct: 185 GGLRRFLPRNRTLVNRVWVEMNDQII-NYIRGKVIEILIVGVATYIPFALMGLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +IP GA V++ L + G T L + + + L P L Sbjct: 244 VAVGFSVLIPYIGAAAVTVPVAMVALFQWGLTPEFTWLMVAYLVIQALDGNLLVPLLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L+ + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVINAW 345 >gi|54027201|ref|YP_121443.1| hypothetical protein nfa52270 [Nocardia farcinica IFM 10152] gi|54018709|dbj|BAD60079.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 390 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 112/335 (33%), Gaps = 16/335 (4%) Query: 20 ILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +++ + L+ G ++ +L + F P + ++ + + ++ + + Sbjct: 27 LVLGFWVLQRLQGLLTVLMISLFLAFAIEPAVNWLAAR-GMRRGPATGLVFLGLVAVVVA 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + ++ LV V W++ + E K+ + Sbjct: 86 FFGALGALLVDQVTTLVQNAPDY---ADQVVDWINRTFRTQLSGEDIEKYATE---WSDK 139 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E +L A G + + +++ F+F DG + SL Sbjct: 140 LEGYLVG-----FAGNAWGIGTAAVGALFQALGVLLFTFYFAADGPRFRNAVCSLLPPRR 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP 255 + + I + ++A+ + +A + GVPS +AL + +++ IP Sbjct: 195 QVHVLRAWDIAVEKTGGYIYSRGLLALCSAIAHYAALRVLGVPSALALALWVGVVSQFIP 254 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 A+ I + + + +A L + + + L+P + + + F Sbjct: 255 TVGTYLAGAIPIVVALVHDPGSALWLLGFIVLYQQFENYVLQPRITATTLDMHPAVAFGA 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G +G G + + A + + + Sbjct: 315 VLAGAALLGATGALLAIPVTATVQAFAGAYVRRYE 349 >gi|311113400|ref|YP_003984622.1| hypothetical protein HMPREF0733_11731 [Rothia dentocariosa ATCC 17931] gi|310944894|gb|ADP41188.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length = 440 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 100/317 (31%), Gaps = 8/317 (2%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A+ I PI S + VI +S + ++++ + V + Sbjct: 132 AIFIALGLDPIVRKLES-FGVKRSAGVVIVVLSFAAIISGLVVWIVPIISAQASSFVYRA 190 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q I I + ++ + + E+ ++ + Sbjct: 191 PAIYQDFIDS-DTFKRIDDVLHVNDWVNNN------VPKFLESLTSSSAVGGFMSNLITA 243 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G I ++ +F +I L ++++ + + + + Sbjct: 244 GSTIAQILTGTIIVLFLSLYFLSSMRTIKAWGSRLAPASKRERVEELTERITGAVGNYVM 303 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G ++A+ + G + V I+A IP ++ + +L+ Sbjct: 304 GQGVVAVLNATFALITMIILGFSFPQLVAVFVLILAFIPLVGGVAALVLVSLILLTQGWQ 363 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + + I L I + P ++ + +P + G G+LG I + A Sbjct: 364 MSVTFAIAYFIYLQIEAYVISPRIMSKAVSVPGGVAIIAVAAGGALWGVLGALIAIPVAA 423 Query: 337 LIAVIWKESIMAIKENK 353 + ++ KE + ++++ Sbjct: 424 SLLILVKEVFIPRQDHR 440 >gi|289578242|ref|YP_003476869.1| hypothetical protein Thit_1040 [Thermoanaerobacter italicus Ab9] gi|289527955|gb|ADD02307.1| protein of unknown function UPF0118 [Thermoanaerobacter italicus Ab9] Length = 339 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 125/333 (37%), Gaps = 24/333 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKEESS 59 + + + F+I+ ++ L F +P A ++ + P F + K S+ Sbjct: 2 QVKKIYLFFLIIAAIGLLYFFIKNWVSIKNILSPFFIAGLVAYLLNP-MVKFFNSKGLST 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F ++ + V ++ ++F + EM ++ + P ++ ++ + Sbjct: 61 FFSILLVFLIVTLGILIFSFYIFPLMINEMIAFITMI----------PFYIEELQNILIQ 110 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPR--FASRFGMIFLDYCLSIIFMIIALFFF 177 + P + + + L T F R A + + L + I + I F+F Sbjct: 111 LKF-NYFSYLPPQFEKVLDKNLNTLNNLFASRVDMAFKSTVAILKNVIDAILVPIITFYF 169 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D ++++ + + + + R + K++ ++I G++ L Sbjct: 170 LKDKNLFKKEIEKIIPSKYHCSFFTLLRKIDKILSKYIRAQIYLSIFVGILTSIGLSLIK 229 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +G++T ++ +IP PI ++ L ++ + + I + + Sbjct: 230 IKYAFLVGLLTGVLNIIPYIGPILSIIPAVLLGFLDSLSKGIWALVVCLLVQQIENAFIT 289 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P ++ + L + F L+ G T LG FI Sbjct: 290 PKILSDSVGLHPITVIFSLIAGGGTFWHLGAFI 322 >gi|318059209|ref|ZP_07977932.1| integral membrane protein [Streptomyces sp. SA3_actG] gi|318079386|ref|ZP_07986718.1| integral membrane protein [Streptomyces sp. SA3_actF] Length = 367 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 116/338 (34%), Gaps = 21/338 (6%) Query: 11 IMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ ++ + V ++ LK P+L A++ P+YS + + + A I Sbjct: 27 VLLLLVTGVAAVGIWLCVELKTAVTPILLAVLGTALLRPLYSLLVHRVHVQRSLAAGITC 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V+ + + ++++ + + W T Sbjct: 87 AAVVAAVGGAGYIVTSAIVDNGQQILDSIRSGIED------------AASWVGAEDTSLD 134 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L F T I + + + + + ++ +FFF RD + Sbjct: 135 DITHNARQLLNKFGGTAATGVINGLS-----VVGSFVATAVLALLLMFFFLRDAGRALRG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + ++R + + G TIIA+ + + + GVP + LG + Sbjct: 190 LRELSPGDSSDLVEAMARRAYQAVAGFMHGTTIIALIDATFITIGLLVLGVPGALGLGAL 249 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP GA +S + L A + + L+P + ++ Sbjct: 250 VFLGAYIPYLGAFLSGAVAILVALADRGFVIALWVLGVVLAVQVLEGHLLQPVVQSRTVQ 309 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G G+LG+ + L A I++E Sbjct: 310 MHPAVVMVTITAGASLAGILGMLLAVPLTAAAFGIFRE 347 >gi|262404511|ref|ZP_06081066.1| permease PerM [Vibrio sp. RC586] gi|262349543|gb|EEY98681.1| permease PerM [Vibrio sp. RC586] Length = 356 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 120/350 (34%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ + +YF AP+L A+++ + WP+ +S+ T +I Sbjct: 15 DPHAASLVAILLFGFIIIYFFGNLIAPLLVAIVLAYLLEWPVAQ--LSRLRIPRTLAVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V L + + E+ Sbjct: 73 VITMFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQKFITTLPERYPELAHFEIVES 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S+ ++ + + + + A+ + +I + + +FF +D + Sbjct: 133 VISNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + V L Sbjct: 185 RMASGILPR-NRKLATKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPEFYTLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +WK E++ Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLDDESE 353 >gi|312141448|ref|YP_004008784.1| integral membrane protein [Rhodococcus equi 103S] gi|311890787|emb|CBH50106.1| putative integral membrane protein [Rhodococcus equi 103S] Length = 383 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 107/310 (34%), Gaps = 13/310 (4%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 ++ + ++A V + + L F+ + + +L + + WL+ Sbjct: 56 QHRRGVPRSAAVLVAVVGTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTK---AQEWLT 112 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 P ++ + ++++ E A+ G IF L+ + Sbjct: 113 QGPLHFSEDQIRHAGDNVVKAIQSNQEALTSGA-----LTTATVIGEIFAGAFLT----L 163 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L FF G + + + + + R + +A + + +G+ Sbjct: 164 FTLVFFLYGGNQVWEFVTRIIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGA 223 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + GVP + L + + A IP GA ++ + L+ + A + + Sbjct: 224 GLAILGVPLALPLASLVFVGAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQ 283 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L+P L+G ++L L + G+ G++G + ++A + + Sbjct: 284 LEGHVLQPLLLGRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGDT 343 Query: 351 ENKEKISSNF 360 + E++ + Sbjct: 344 DEAEEVYESL 353 >gi|258650461|ref|YP_003199617.1| hypothetical protein Namu_0195 [Nakamurella multipartita DSM 44233] gi|258553686|gb|ACV76628.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 486 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 109/339 (32%), Gaps = 15/339 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I +I + L ++ + A ++ P+ S+ + +A Sbjct: 162 VLIAYITFLVLDSIRDTLVMIAIATLLAIGLDPLVSAMTKRGLRRGAGVA---------- 211 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +V L L + + VP ++D+ L + Sbjct: 212 -VVFLGLLLVIAAAIYAIIPPIINEVGSFVATVPTLINDLQTNDTVQGLDQRFGLLEALR 270 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + I + +F D ++ ++I +F I L Sbjct: 271 NSNIVQSLGSGAAGGILSASFTVATVFAD----LLIVLILTLYFLAGFPRIKAAGYRLVP 326 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + K + G TIIAI GLV G + G+P A+G+ A++ Sbjct: 327 ASRRVRVSDLGDRILKQMGGYLSGATIIAIQAGLVAGIFSSIIGLPYPWAIGLGAAVLDF 386 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP PI + + ++ + L P ++ + + Sbjct: 387 IPVVGPIIVGVSITLIGFTQGLGIGIISGVFYLCQHLFEAYWLYPRVMRRTVNISTGGVV 446 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+ G + + A I +I +E IM ++E Sbjct: 447 VAILIGASLLGVTGAILAVPVAAAIMLIVREVIMPMQER 485 >gi|113970680|ref|YP_734473.1| hypothetical protein Shewmr4_2345 [Shewanella sp. MR-4] gi|113885364|gb|ABI39416.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 366 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 12/303 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + V + + +V L + L++ + G+ Sbjct: 54 WPVAQML--KLGINRTTGASLVLVLFLGIVVVLTFGLIPSVWRQGVSLMTDLPSMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L+ +S+ + + L T + I + + L Sbjct: 112 QTLQGLATQYPQFVSSDQLNL-------MVAELKKLLDTQHLLDIAKQLIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVI 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + G+ LGV+T + +IP GA + +++ + + + Sbjct: 224 VGVASYIFFAFMGLRYSALLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KES 345 Sbjct: 344 NAW 346 >gi|254561252|ref|YP_003068347.1| permease [Methylobacterium extorquens DM4] gi|254268530|emb|CAX24487.1| putative permease (PerM family) [Methylobacterium extorquens DM4] Length = 370 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 106/310 (34%), Gaps = 14/310 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +++ LY L+ P ++ L + + P+ + AT+ ++ F+ Sbjct: 11 ILAVVVFLLYELREVMLPFVAGLALAYLLDPLADRLERLGLGR-----LAATLLILAGFV 65 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + L + ++ +V + + + + G + + + L+ Sbjct: 66 VGFVVLLIIVVPLAAGQIASLVNSLPTMVGRLQSILVERAGPLLQRIGGTEVVN--ELQS 123 Query: 136 LSETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + G F+ S + + ++ + F+ D + LD Sbjct: 124 SVGTLVGQGGAWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIAALDGWVP 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++++ + + G +++ + G +L G+ V +G+I+ + Sbjct: 184 PRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMISGFLTF 243 Query: 254 IPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP G +S + G+ + + F+ + P LVG + L Sbjct: 244 IPYVGTLTGFLLSVGVALVQWWPSGDWLHIGLTVGVFLVGQFLEGNVISPKLVGDSVGLH 303 Query: 309 FLPTFFGLVG 318 + F L+ Sbjct: 304 PVWLMFALLA 313 >gi|110802261|ref|YP_697882.1| hypothetical protein CPR_0554 [Clostridium perfringens SM101] gi|110682762|gb|ABG86132.1| putative membrane protein [Clostridium perfringens SM101] Length = 366 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 116/336 (34%), Gaps = 4/336 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSE 138 +L + EL+ + V ++I E +L H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTN---YVQNLFTEIMASFKVPEGINSYLPHGDTNKLITFI 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + T +++ A +++ + I L + S+ + Sbjct: 151 GSMVTLLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKNLGD 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +I+ + I + I ++ GL+ + + L V+ I MIP Sbjct: 211 EILEFIKILNEKIGTYVGIKAIDSLIIGLLAFVGLTVIKSEYALLLSVLVGITNMIPYFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V ++ + + A + ++ I L P L+G + L G+ Sbjct: 271 PFIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTL 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G +G+ +G +M++I + + I + E Sbjct: 331 GGAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|168212573|ref|ZP_02638198.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|170715715|gb|EDT27897.1| putative membrane protein [Clostridium perfringens CPE str. F4969] Length = 377 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 113/333 (33%), Gaps = 8/333 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMC 72 I+ LY G P + + I F S +F + + + Sbjct: 31 IMNFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + +Q + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ L++I I L + + + Sbjct: 151 KEILKVTSQIVGTSLGYLLDFTLGITYGVINFFLALILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|229846326|ref|ZP_04466434.1| hypothetical protein CGSHi7P49H1_06635 [Haemophilus influenzae 7P49H1] gi|260582877|ref|ZP_05850662.1| lipoprotein NlpI [Haemophilus influenzae NT127] gi|229810419|gb|EEP46137.1| hypothetical protein CGSHi7P49H1_06635 [Haemophilus influenzae 7P49H1] gi|260094090|gb|EEW77993.1| lipoprotein NlpI [Haemophilus influenzae NT127] Length = 349 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 117/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ VS+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFVSIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPKNYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + +K + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFK-VWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|15895697|ref|NP_349046.1| permease [Clostridium acetobutylicum ATCC 824] gi|15025448|gb|AAK80386.1|AE007743_8 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509847|gb|ADZ21483.1| permease [Clostridium acetobutylicum EA 2018] Length = 339 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 118/346 (34%), Gaps = 24/346 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----SSTFLA 63 + R + ++ YF + +L I+ + ++ +S + +A Sbjct: 10 KESFKRGAFLVLLAAFFYFCRSIMNFILLTFIVTYLISSLHGFIVSNLRKYIKVREGLIA 69 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V ++ + ++ + E +V++ + S+L Sbjct: 70 LLLYVLIIAVIVLVFYNYVPVIVRETTNIVNQATNFYNT--------------IDTSDLG 115 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG-- 181 T + L G+ +I FA FG + L+ L+ + +LFF G Sbjct: 116 TLGKYIQPMITKLDIGSYTKQGLSYIIEFAKNFGKVSLNLFLAFVL---SLFFVLEKGTI 172 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + Y+ +IAI ++ A + G P+ Sbjct: 173 KKFGKKFEKSKLSTMYEYFVYYGNNFLNSFGKVIKAQILIAIVNAVLSSIALAIMGFPNL 232 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG + ++++IP G IS +S + L + I L P L Sbjct: 233 MTLGFMIFVLSLIPVAGVIISLVPLSFIAFNINGFTEVIYVILMVVVIHCIESYFLNPKL 292 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + KLP TF L+ MG GL +G L + +++ + Sbjct: 293 MSSKTKLPIFFTFIILIVSGDFMGTWGLLLGIPLFMFLLDVFEVKV 338 >gi|162147067|ref|YP_001601528.1| hypothetical protein GDI_1272 [Gluconacetobacter diazotrophicus PAl 5] gi|161785644|emb|CAP55215.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 439 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 122/348 (35%), Gaps = 7/348 (2%) Query: 1 MRETMLNPQGI-MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R + +PQ I + + + + +LYF P++ AL++ ++ Sbjct: 56 VRRSRFDPQTICLLILTVLAVFYTLYFAAAIILPIVLALVVNLLLSAPMRVLHTRLHLPK 115 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T A++ + V + + + + H + R + I Sbjct: 116 TLSALVLILGVFGVVGAIGTAISVPAAGWIARAPQTMAALQTHLAVLHRPIQMIQAANDR 175 Query: 120 SELWTKHLSHPQSLKILSETFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 E + +S Q + L ++ + F S + + + M++ LFF Sbjct: 176 IENFLSVVSGRQGGGGGGQVVLLAPSSSPGGGLGTFGSSVLLGTRAFVGQLFTMMLMLFF 235 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 G S+ ++ + +I+ + + + +TII + GL W+ Sbjct: 236 LLAQGDSLLRRFVEIMPTFADKRRAVQIAYQIERNVSLYLTTITIINVLVGLANMLQCWV 295 Query: 236 AGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G+P+ + GV+ ++ IP P+ + L + + A + Sbjct: 296 FGMPNPLLWGVLAFLLNYIPIIGPLTGIVIYFVVSLFVFPSALQALLPPTVYLCIHLMEG 355 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P ++ L + L+ G+ G F+ ++A+ +I Sbjct: 356 ETITPMVLARRFTLNPVLVMGSLMFWDWLWGVWGAFLSVPMLAVFKII 403 >gi|168187612|ref|ZP_02622247.1| permease [Clostridium botulinum C str. Eklund] gi|169294517|gb|EDS76650.1| permease [Clostridium botulinum C str. Eklund] Length = 368 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 118/340 (34%), Gaps = 9/340 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L + P A I + P+ F K F +I + ++ + + Sbjct: 30 VFASGLSIVISILTPFFWAFGIAYILNPLMLYFEKKFNLKRCFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L++ + + I W S L + + + Sbjct: 90 TIISPAIINNVGKLLNDMPIY---VIKTQAWFYTTINKFNLSN--NTTLIQFANKGLTNI 144 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ----QLDSLGEH 194 T T+ + A + F L +IF I + +D S + L + + Sbjct: 145 TTTLTDSLKSFLNVALSNAIDFTSSFLKMIFGFIISVYILKDKESFQKNAKNFLYCVFKK 204 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V + +G +I ++ G++ + P + + ++ I MI Sbjct: 205 ESVDSFLTFGNEVNIIFSQYIIGKSIDSLIIGILCAIGLAILQTPYVLLISLLVGITNMI 264 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P ++ + + + A + L+ + L P ++G + + Sbjct: 265 PYFGPFIGMIPAVLITVFYSPIKALWVLLFILVLQQFDGWVLGPKILGDKVGVSPFWIIL 324 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G T G+LG+F+G ++A+I + + I ++K Sbjct: 325 AILVGGGTFGVLGMFLGVPIIAIIKTLLQRFITRRLKSKN 364 >gi|269118864|ref|YP_003307041.1| hypothetical protein Sterm_0225 [Sebaldella termitidis ATCC 33386] gi|268612742|gb|ACZ07110.1| protein of unknown function UPF0118 [Sebaldella termitidis ATCC 33386] Length = 345 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 101/320 (31%), Gaps = 16/320 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P +S+ II + P K + VI + + ++ + + + Sbjct: 42 LVPFISSFIIVYCLMPFIDVLSKKLRINKKISIVIVFSIFILFLLYIVISILPLVIKQFN 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ V +E +S+ +L +N ++ I Sbjct: 102 GLIRYFVNNQGQ------------IQKEINEFLDGTNIDLKSVVGKVREYLFSNSMNLIN 149 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + F +F ++ IF ++ LF + SI L + + + Sbjct: 150 SSIALFSGLFSFMFMTPIFTVMLLFSY----DSIKTGLRKSLIRNKKRNILPLLKDIDDA 205 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G + ++ V +I + +IP P + Sbjct: 206 VGKYIKVTLLDCFIIGTLSSIVFYFLKVDYMQLFSIIIGVGNLIPFIGPFISIVPVLIYA 265 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++ + + + I ++P+L + + + T ++ G G++G FI Sbjct: 266 ATKSLNLFISILVIITVLQGIEANIVKPWLTSKSVNIHPITTLLVILIGGSLFGIIGAFI 325 Query: 331 GPVLMALIAVIWKESIMAIK 350 + +I +I++ IK Sbjct: 326 AIPVYIIIKLIFQFYRKKIK 345 >gi|126698629|ref|YP_001087526.1| hypothetical protein CD1045 [Clostridium difficile 630] gi|255091987|ref|ZP_05321465.1| hypothetical protein CdifC_04920 [Clostridium difficile CIP 107932] gi|255305971|ref|ZP_05350143.1| hypothetical protein CdifA_05210 [Clostridium difficile ATCC 43255] gi|255313721|ref|ZP_05355304.1| hypothetical protein CdifQCD-7_05208 [Clostridium difficile QCD-76w55] gi|255516403|ref|ZP_05384079.1| hypothetical protein CdifQCD-_04772 [Clostridium difficile QCD-97b34] gi|260682669|ref|YP_003213954.1| hypothetical protein CD196_0922 [Clostridium difficile CD196] gi|115250066|emb|CAJ67886.1| putative sporulation integral membrane protein [Clostridium difficile] gi|260208832|emb|CBA61754.1| putative membrane protein [Clostridium difficile CD196] Length = 350 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I ++ + +Y + AP II PI +K + ++ + + + Sbjct: 19 FCIYTLLFIFIYKAFPYIAPFFLGAIIALMINPISQKLENKFRINKGISTLVLSFLAVAI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + M E+ ++ + + + + S + Q + Sbjct: 79 VSTVTTIIVINSMKELMGFLNNISANPEDISNTIMYFLNKINDFMKSFQEIANFDVEQLV 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S ++ + + II + IA +F +D I ++ Sbjct: 139 NKFSGEVMQIT--KNLLTSILGLATSIPYIIIFIITLFIATYFIAKDLDKIENSFYNMFT 196 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + + TI+ + ++ L G+ + +G + A+M + Sbjct: 197 VDVRKKVKNVKKEAGLSLVGYIRAYTILMAITFFAIWGSFALFGLKYGLIVGFVGALMDL 256 Query: 254 IPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP I + V +Y + N F A + + L ++ + L P LV + L L T Sbjct: 257 IPFLGIITIYLPVIVYYFLIKNYFIAISMTVI-FFVLSLIREILEPKLVSVNVGLNPLAT 315 Query: 313 FFGLVGGVRTMGLLGLFI 330 + G++ G++G+ Sbjct: 316 LAAIFIGIQVKGIIGVIF 333 >gi|220918636|ref|YP_002493940.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219956490|gb|ACL66874.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 412 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 80/210 (38%), Gaps = 1/210 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + F+ + ++ + + F D I + +++ + A +++ + Sbjct: 178 VVAFSRAILAGTIQTLFFVVLLFMLTAFISMDAPRILRWFETVVPSHWRADLRRLRAGID 237 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + G I + G++ + VP ALG + ++ ++P G +S + + Sbjct: 238 AGLSGVVRGQLTIMVVNGILTLIGLLVLKVPFAFALGFLAFVLYIVPIFGTILSSVPIVL 297 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L G A W + + L P ++G ++ + LV G R+ G++G Sbjct: 298 LALTGGGPTKALLALGWITVVHALEAYVLNPKIMGDAARIHPVLIVLALVVGERSFGIVG 357 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + +++ +++ E E+ + Sbjct: 358 ALLAVPVASVVVAVFRFLHRKQVELDERAA 387 >gi|2506918|sp|P43969|PERM_HAEIN RecName: Full=Putative permease perM homolog Length = 349 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 116/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPKNYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + + + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFXRW-KEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|297243766|ref|ZP_06927696.1| permease of the PurR regulon [Gardnerella vaginalis AMD] gi|296888187|gb|EFH26929.1| permease of the PurR regulon [Gardnerella vaginalis AMD] Length = 529 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 106/341 (31%), Gaps = 19/341 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAV 64 + ++ I+ + + L+F + ++ ++I P+ I + Sbjct: 45 RALIYVAIVTFVSIFLWFAWNSISFIVFDVVISIFIALAMEPLVVRLIKH-GWRRGVASG 103 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + + L ++ +V + + Sbjct: 104 FTLTGLLVVISLLLALFGNLFAQQVVSMVMGLPDLYNQ------------FANFVLHYTG 151 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + L + ++T+ + A + L ++ +I+ ++ G ++ Sbjct: 152 FKMPNIEQLGMEILKHVQTSWVVDFAGQALNTTWGLMTVLLDLLTIIMVTYYISAAGPAM 211 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + I +V + I S I+A + + +P + L Sbjct: 212 RRSMCRWMNPQAQRRFLFIWSVVQEQISSFLFSRIILAAINAVGTAIFLIVMNIPYWLPL 271 Query: 245 GVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + I++ +P G + + A ++ I I + + P + Sbjct: 272 SLFCGIVSQFVPTIGGYLGGALPILVAWGSNGFGAAVATLIFITIYQQIENMVISPKISE 331 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L F ++ G LG F+ + A + I++ Sbjct: 332 KTMDLNPAVAFISVLVMGAVFGALGAFLALPVTASLQAIFR 372 >gi|293365480|ref|ZP_06612189.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|307703436|ref|ZP_07640378.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291315848|gb|EFE56292.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|307622843|gb|EFO01838.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 364 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 112/326 (34%), Gaps = 7/326 (2%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ +I F + + ++++ +F+ +L + +L + L Sbjct: 41 LIYGAVIAFVLNVPMKKIEQFLVKMKVKAELCRPIAMVLVFLALILIVIGLLVLILPTLS 100 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + V L + LS S + + I F+ Sbjct: 101 QTISQLGTVLSTVLTKLGKLLDSSEFVT--KDMLSTIVSGIQGESSSISQALIGFLSGLT 158 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY----WKKISRIVPK 209 S G ++ +I+ F F +++ L + L P + ++ + Sbjct: 159 SNIG-NIFSSLMNAFLIIVFTFSFLSSKEHLAEMTSRLLKVLLPEKVVIKLTYVGQVALE 217 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + I A+ G+++ Y L G+P V G+ +++ IP P+ V Sbjct: 218 TYDQFLMSQLIEAVIIGVMVAVGYSLFGLPYGVMTGIFAGVLSFIPYVGPMIACVVGAIF 277 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + A L + I + P +VG I LP L T G GLLG+ Sbjct: 278 IFTVSPTQALLSILLYQVIQLIEGNLIYPRVVGQSIGLPALFTLAAASIGGNLFGLLGMI 337 Query: 330 IGPVLMALIAVIWKESIMAIKENKEK 355 + A+I + KE ++A + +K Sbjct: 338 FFTPIFAVIYRLVKEFVVAKENQLDK 363 >gi|110634425|ref|YP_674633.1| hypothetical protein Meso_2075 [Mesorhizobium sp. BNC1] gi|110285409|gb|ABG63468.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 385 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 117/330 (35%), Gaps = 14/330 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + + LYF + FF PV+ A ++ T PI A ++ ++ Sbjct: 33 VFLILFVAGLYFARDFFMPVVIAFLMAMTLTPIVRFL-----GKRGIPAALSATLLVFAS 87 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L Y + ELV L + + K + Sbjct: 88 WSAIGMLGYAMSGPVIELVDDAPRIGSELRQRVAELRRPLEDVMEASEQIKEATEAADEP 147 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + GI SR L ++ ++ F G +++ Sbjct: 148 GVQRVVIAQPGI------ISRAAGNLLSVATTVGITLVLTLFLLASGTLFYEKIVQSFGA 201 Query: 195 LFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L +I V + + L + +I G+ +G W GVP+ + GV A++ Sbjct: 202 LSDKKRALRIVFDVEREVSRYLLTIALINSALGVTVGIGLWGLGVPNALVWGVAAAVLNF 261 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P GA ++F V+I L+ L L+ A+ + + + P ++G ++L + Sbjct: 262 LPYVGAIVTFGLVAIISLVTFESLYFAMLPPLYVALCNTLEGQFVTPLVLGRRLELNAVA 321 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G++G I L+ ++ V Sbjct: 322 IFIAVAFWSWLWGIVGALIAVPLLVVVKVF 351 >gi|227518987|ref|ZP_03949036.1| permease [Enterococcus faecalis TX0104] gi|227073559|gb|EEI11522.1| permease [Enterococcus faecalis TX0104] Length = 383 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 126/372 (33%), Gaps = 27/372 (7%) Query: 11 IMRWMIMFIILVSLYF-------------LKGFFAPVLSALIIGFTSWPIYSSFISKKE- 56 ++R++ + ++V L G +P ++ +I + + Sbjct: 12 VVRFLFVMALIVGYLLITNYQHFVHSVSGLLGILSPFITGFVIAYLLSGSQKKIEGLLKI 71 Query: 57 -------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 ++ + ++ +F++ L ++ + + +L + + H + Sbjct: 72 PLPVVKKAKHGLSVLLLYLIILFIFVLTLNYIVPLLISNLVDLANSLPTFYDHMVQFVMS 131 Query: 110 LSD--IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 L D I + L + L++ T + + FL+ L++ Sbjct: 132 LEDKGILKTAAIEKYLNSVLKDLSPERFLNQ---WTQALFSLGTLTKNVSSFFLNAFLTL 188 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I I AL F + + L + K+ + A G+ Sbjct: 189 IISIYALVFKQSILTFVEKAAHKLLSEKVYKQTQTWLSTTNKIFYKFISCQFLDACIIGV 248 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + V V LG++ I MIP G+ + + L G + A + L Sbjct: 249 SSTILLSILNVKFAVTLGILLGICNMIPYFGSIFASIVAGVITLFTGGVTQAITVLLVLL 308 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I I + P ++G + + + + G G+LG+F+ + A+I +I E + Sbjct: 309 ILQQIDGNIIGPRIMGDALNVNPILIIVSITIGGAYFGVLGMFLAVPVAAIIKIIVSEWL 368 Query: 347 MAIKENKEKISS 358 KEN + + S Sbjct: 369 NESKENDKIVDS 380 >gi|322392109|ref|ZP_08065571.1| membrane protein [Streptococcus peroris ATCC 700780] gi|321145009|gb|EFX40408.1| membrane protein [Streptococcus peroris ATCC 700780] Length = 369 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 113/338 (33%), Gaps = 8/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + + PI + + + ++ + ++ Sbjct: 29 AIITPFVSVVNTIMIPFLLGGFLYYLTNPIVIFLEKECKINRIIGILLTLFVLFGSIVIG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+S + LS P + LS Sbjct: 89 VVYLLPILINQLSSLISSSQGIYGRLQDLVIELSKYPTFQEID------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALVSTVLIIIMTPVFLIYFLLDGHKFLPMLERSVLKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 + + + I G++I A+ G + Y + G+ + + + + +IP Sbjct: 203 RNISGLLKNLNSTISRYISGVSIDALIIGCLAYIGYSVIGLRYALVFAIFSGLANLIPYV 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I + I L + ++ I + L P +VGG +K+ + L Sbjct: 263 GPSIGLIPMVISNLFT-DPQKMIIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLL 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G++G+ + +++ I K + +KE Sbjct: 322 LLSSNIYGVVGMIVAVPTYSILKEISKFLARLYENHKE 359 >gi|240138654|ref|YP_002963126.1| putative permease (PerM family) [Methylobacterium extorquens AM1] gi|240008623|gb|ACS39849.1| putative permease (PerM family) [Methylobacterium extorquens AM1] Length = 370 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 102/315 (32%), Gaps = 24/315 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS------ 69 I+ +++ LY L+ P ++ L + + P+ A + ++ Sbjct: 11 ILAVVVFLLYELREVMLPFVAGLALAYLLDPLADRLERLGLGR--LAATLLILAGFVVGF 68 Query: 70 -VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + +VPL ++ + + + P L I G +EL + + Sbjct: 69 VVLLIIVVPLAAGQIASLVNSLPTMVWRLQSILVERAGP-LLQRIGGTEVVNELQSSVGT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 FLK+ + ++ + F+ D + L Sbjct: 128 LVGQGGAWFLAFLKSLWTG---------SQALVSIASLLVVTPVVAFYVLHDWDRMIAAL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D ++++ + + G +++ + G +L G+ V +G+I+ Sbjct: 179 DGWVPPRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMIS 238 Query: 249 AIMAMIPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + IP G +S + G+ + + F+ + P LVG Sbjct: 239 GFLTFIPYVGTLTGFLLSVGVALVQWWPSGDWLHIGLTVGVFLVGQFLEGNVISPKLVGD 298 Query: 304 PIKLPFLPTFFGLVG 318 + L + F L+ Sbjct: 299 SVGLHPVWLMFALLA 313 >gi|193214208|ref|YP_001995407.1| hypothetical protein Ctha_0489 [Chloroherpeton thalassium ATCC 35110] gi|193087685|gb|ACF12960.1| protein of unknown function UPF0118 [Chloroherpeton thalassium ATCC 35110] Length = 404 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 126/348 (36%), Gaps = 7/348 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + R + +IL ++F L G +P + + + + P+ + K+ + Sbjct: 45 PLRDSEYGRRLLWSSVILFFIWFVTALSGLLSPFIISFTLAYLFDPMVNWLCKKRVPR-S 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A T+ + + ++ + ++ L+ + + + + V LS + Sbjct: 104 VAAFFITMFGIGGLALLIILVVPEVSRQIMALLGLIKILPERTLDVINALSKWEFFDRLN 163 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + DF A + ++IIF+ I F+F D Sbjct: 164 LDVEMMEKQLSGLVTSRVGDIGKLTADFATSLALSI-PKVISTIMNIIFIPILSFYFLND 222 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I L + + + + + + + G II E ++ + L G+ Sbjct: 223 FETIRDTLYKILPNTYTQTVHRYVDVAGTIFKQYLRGYLIIMTLEIILYTIIFSLIGIKY 282 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRP 298 + L +I M +P +++ ++ GN LF L + + L P Sbjct: 283 PLVLAIIAGAMLFVPYIGIFISVSLTALVIALGNGEGQIYLFTGLTYLTIQSVENFFLIP 342 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +VG ++L + F +V +G +G+ I + A + I++ + Sbjct: 343 KIVGSRVQLNPILLFLAIVLFGYFIGFVGILIAVPVSAFLVAIFRHKV 390 >gi|312969714|ref|ZP_07783897.1| inner membrane domain protein [Escherichia coli 1827-70] gi|310337999|gb|EFQ03088.1| inner membrane domain protein [Escherichia coli 1827-70] Length = 168 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 48/128 (37%), Gaps = 1/128 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A + +WP+ + ++ T+ ++ + Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 FI+P+ L + L+ K + + +P WL+ IP +L Sbjct: 78 FIIPIALLVNSIVDGSGPLI-KAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGR 136 Query: 134 KILSETFL 141 + ++ L Sbjct: 137 RSWRKSAL 144 >gi|285808297|gb|ADC35828.1| hypothetical protein [uncultured bacterium 89] Length = 349 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 114/336 (33%), Gaps = 25/336 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT--VSVMCL 73 ++ + + +Y ++ + AL+ + P+ S T +A + V + Sbjct: 17 LVLLAMSMVYLIRHTLFIFVIALLFAYLLSPLVDFLDRLFPSSRTRTPALALAYILVTGI 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I L + + E ++++ G W L Sbjct: 77 LIGGGFMLGTRAVDQANEFITRIPEVVGKAKNFAP-----KDGSWLGRLLENTEDQLAQR 131 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG- 192 +L G I + + I+ + I FF +D S+ + L + Sbjct: 132 INDVLHYLPALGKGVI---------SVAETLVLIVVVPIFSFFLLKDASSLRKSLLEMMG 182 Query: 193 ----EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L ++ ++ + +R+ ++ + + A AG P + L I Sbjct: 183 TGSHRELMEDLADDVNLLLAQYVRALA----LLCLTTFTIFALAAEFAGAPYPLLLAGIA 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A + IP P++ + I + + + + + I D + P L+ ++L Sbjct: 239 AGLEFIPMVGPLTAAVLIIVINLIAGYPHILGVLAFLGIYRIFQDYVVAPRLMSAGMELH 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L FG+ G G+ G F+ +A+I ++++ Sbjct: 299 PLMVMFGVFAGAEVGGIPGTFLSVPAVAMIRIVYRR 334 >gi|256964900|ref|ZP_05569071.1| membrane protein [Enterococcus faecalis HIP11704] gi|307272991|ref|ZP_07554238.1| hypothetical protein HMPREF9514_01757 [Enterococcus faecalis TX0855] gi|256955396|gb|EEU72028.1| membrane protein [Enterococcus faecalis HIP11704] gi|306510605|gb|EFM79628.1| hypothetical protein HMPREF9514_01757 [Enterococcus faecalis TX0855] Length = 366 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALLSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|312111198|ref|YP_003989514.1| hypothetical protein GY4MC1_2166 [Geobacillus sp. Y4.1MC1] gi|311216299|gb|ADP74903.1| protein of unknown function UPF0118 [Geobacillus sp. Y4.1MC1] Length = 342 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 26/348 (7%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +I +++ LY ++ +L I F + + + + ++ V+V+ Sbjct: 16 RIVIFSVLIFILYLVRSILNIILLTFIFSFLMNGLVDFISKRIRINRKIIVLLLYVAVVS 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + E+ +L+ ++ + Sbjct: 76 ILVYGVVKYLPVVINEISQLIKQLTEFYSKPQDNIVF---------------------NY 114 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + T ++F + ++ L I+ +I FF + I + Sbjct: 115 IIEQLKHYEITTYLNFGMTYLIKYFSDIGSVGLQILLALILSLFFLLEKERIISFTNRFK 174 Query: 193 EHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ ++ R + IIA + + W+ P LG++ Sbjct: 175 YSKISPFYNELEYFGRKFVRTFGKVIEAQFIIATVNMAITVAGLWIMDFPQLFGLGILIF 234 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP G IS + G I + + A+ + L P L+ LP Sbjct: 235 FLGLIPVAGVIISLFPLCFIAYSIGGIMKVVYVLIMIAVIHALEAYVLNPKLMSSKTNLP 294 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 TF L+ G+ GL +G PV + ++ V+ +++ +++ ++ Sbjct: 295 VFYTFIVLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDDDE 342 >gi|229824112|ref|ZP_04450181.1| hypothetical protein GCWU000282_01416 [Catonella morbi ATCC 51271] gi|229786466|gb|EEP22580.1| hypothetical protein GCWU000282_01416 [Catonella morbi ATCC 51271] Length = 379 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 118/335 (35%), Gaps = 12/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK-------EESSTFLAVIATVSVMCLFIVPLLFLFY 83 P+++ I + + + + ++ + F++ ++ + Sbjct: 39 LGPIINGAIFAYILNLLMVRYEGLLTKVQGQVPGVKSLKRPVSMFLSLLTFVLAVIMILV 98 Query: 84 YGMLEMKELVSKVVLANQ-----HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++ +S+ + + + + P + + Sbjct: 99 LVLPQLSTAISRFIEVIPGVSTWLQRAIEEYDAYFPQLQTLMSQLNINWGSLIQQSMTVL 158 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L +N ++ + ++ LS++ + L R + + + + Sbjct: 159 NTLSSNFLNITFNTITGVASNTINSILSLMVALYILGSKERLLLQGKRVIMAYLKPSHAQ 218 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 I R++ + + F+GMT+ I G ++ A + +P LGVI +MA+IP Sbjct: 219 TLLDIIRLMNESFTNFFVGMTLEGIILGSLVTVAASIFNLPYAGMLGVIAGVMALIPIIG 278 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 AV +L+ + A + I + + + P +VGG I LP L Sbjct: 279 GYISAAVGTLMLLAVSPSQALFYLVMVIIIMQLEGNLIYPRVVGGSIGLPGLWVLVAFTV 338 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G MG+ G+ +G L A + + ++ ++ + Sbjct: 339 GGGLMGISGMILGIPLAATLYKLLGRDVLMREKRQ 373 >gi|213857376|ref|ZP_03384347.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 200 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +I+ L+ ++ F A I +WP+ + ++ T+ ++ L Sbjct: 18 LFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQ- 131 F++P+ L + L+ V +P WL++IP G W L Sbjct: 78 FVIPVALLVNSIVDGSGPLI-HAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGS 136 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ ++ T I F+ + A+ G + L ++F + Y G ++ + Sbjct: 137 AIMAKVRPYIGTTTIWFVGQ-AAHIGRFMMHCALMLLFSAL----LYWRGEQVAMGIRHF 191 Query: 192 GEHLFPAYW 200 L Sbjct: 192 ACRLAAKRG 200 >gi|197123871|ref|YP_002135822.1| hypothetical protein AnaeK_3480 [Anaeromyxobacter sp. K] gi|196173720|gb|ACG74693.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 412 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 80/210 (38%), Gaps = 1/210 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + F+ + ++ + + F D I + +++ + A +++ + Sbjct: 178 VVAFSRAILAGTIQTLFFVVLLFMLTAFISMDAPRILRWFETVVPSHWRADLRRLRAGID 237 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + G I + G++ + VP ALG + ++ ++P G +S + + Sbjct: 238 AGLSGVVRGQLTIMVVNGVLTLIGLLVLKVPFAFALGFLAFVLYIVPIFGTILSSVPIVL 297 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L G A W + + L P ++G ++ + LV G R+ G++G Sbjct: 298 LALTGGGPTKALLALGWITVVHALEAYVLNPKIMGDAARIHPVLIVLALVVGERSFGIVG 357 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + +++ +++ E E+ + Sbjct: 358 ALLAVPVASVVVAVFRFLHRKQVELDERAA 387 >gi|307289338|ref|ZP_07569293.1| hypothetical protein HMPREF9505_02708 [Enterococcus faecalis TX0109] gi|306499705|gb|EFM69067.1| hypothetical protein HMPREF9505_02708 [Enterococcus faecalis TX0109] gi|315163738|gb|EFU07755.1| conserved hypothetical protein [Enterococcus faecalis TX1302] Length = 366 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPAVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|262170855|ref|ZP_06038533.1| permease PerM [Vibrio mimicus MB-451] gi|261891931|gb|EEY37917.1| permease PerM [Vibrio mimicus MB-451] Length = 356 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 123/353 (34%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T VI Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTVAVVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQ---QFITSLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 126 HLEIVESVISNAKNKVLGMGETVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + I G V + + + V L Sbjct: 185 RMASGVLPR-NRKLATKVWEEMNQQISNYIRGKVLEIIIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYVGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ +WK E + +I Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLEDEPEARI 356 >gi|257063512|ref|YP_003143184.1| predicted permease [Slackia heliotrinireducens DSM 20476] gi|256791165|gb|ACV21835.1| predicted permease [Slackia heliotrinireducens DSM 20476] Length = 492 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 128/353 (36%), Gaps = 23/353 (6%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ I+ Y L+ + V+ A + F + F SK A+ V Sbjct: 27 IGIVVIVAGIGYVLRILSTPLSIVMWATLFVFILRSPVAFFESKGIPRVWGTAISYVVMF 86 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L + L+ + + + E A +P W +++ + A+ H+ Sbjct: 87 AVLSV--LVAIMFSPTDGIGE------QAENFIASIPGWATNVADWINANYDQYAHMFDE 138 Query: 131 QSLKILSETFLKTNGIDF------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +++ ++FL + F + + IIF +I F+ + ++ Sbjct: 139 TTVREWLDSFLSSMSAWANELASASATSILDFTSGLANSLMIIIFGLIVAFWILMELPAM 198 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + F + + V + + ++ + G+ G + +A VP+ L Sbjct: 199 GREFRRMVPDRFSDDVEMLYLTVTQAMGGYVRATLVVCLSIGVACGLVFGIASVPNAAVL 258 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +I A++ +IP G I V+ L G I A +F+ I IV ++P L+ Sbjct: 259 ALIAAVLNVIPVVGHWIGLFLVTGIALFSGPIT-AVIVFVSTLIIQEIVYMLIQPKLMSN 317 Query: 304 PIKLPFLPTFFGLVG----GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + + G G++G +G ++ +A I K + E Sbjct: 318 SVDVHPALVIVAMFIGSSAGTALAGIVGSIVGMLISIPVAAILKSLFVYYYER 370 >gi|169830798|ref|YP_001716780.1| hypothetical protein Daud_0614 [Candidatus Desulforudis audaxviator MP104C] gi|169637642|gb|ACA59148.1| protein of unknown function UPF0118 [Candidatus Desulforudis audaxviator MP104C] Length = 358 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 113/326 (34%), Gaps = 10/326 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ ++ P L AL+I P + + ++ + Sbjct: 24 LIVLFYIARYMLPILLPFLVALMISLLIEPAVRLLQERLRFPRPLAVIGVIFVLLAVVGA 83 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTKHLSHPQSL 133 L + E+ L S + + L D I G + S Sbjct: 84 LLTAAALRLVAELGHLSSLLPYHVANFRRTFEGLLDDAVIFYGRLPPAMVNYIDGLLASA 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 E FL+ + + ++ +A +FF RD + + Sbjct: 144 VKSLEGFLRGALDASLG-----LLSTVPFMIVVLMITFVATYFFSRDNEKLREAWIRAIP 198 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + A I R F ++ + + + GVP V++G++T I + Sbjct: 199 EPWGARSLLIVREGFGAFIRFFRAQFVLVSITTAITITGLLIIGVPYAVSIGIVTGIFDL 258 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G F + ++ G+ A LF+ AI LF V +L +V + + L Sbjct: 259 LPILGPTTIFVPWIAWCVLTGSYSLALKLFVLYAI-LFTVRASLEAKVVSMNLGIHPLAV 317 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALI 338 + G++ MG+LGL +GP+L+ ++ Sbjct: 318 LVAMYIGLKVMGILGLILGPILVVVV 343 >gi|24374396|ref|NP_718439.1| permease PerM, putative [Shewanella oneidensis MR-1] gi|24348962|gb|AAN55883.1|AE015725_5 permease PerM, putative [Shewanella oneidensis MR-1] Length = 361 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 12/303 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + + + + ++ L + L++ + G+ Sbjct: 54 WPVAQML--KLGINRTTAASLVLIIFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L+ + E + + L T + I + + L Sbjct: 112 QTVQGLATQYPQFISVEQLNL-------MVAELKKLLDTQHVLDIAKQLIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVI 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + G+ LGV+T + +IP GA + + + + + + Sbjct: 224 VGVASYILFAFMGLSYSALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+LG+F L +L+ + Sbjct: 284 LGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVFGGLWGVLGVFFAIPLASLVKAVI 343 Query: 343 KES 345 Sbjct: 344 NAW 346 >gi|229545594|ref|ZP_04434319.1| permease [Enterococcus faecalis TX1322] gi|229549782|ref|ZP_04438507.1| permease [Enterococcus faecalis ATCC 29200] gi|255972511|ref|ZP_05423097.1| predicted protein [Enterococcus faecalis T1] gi|256619288|ref|ZP_05476134.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256762780|ref|ZP_05503360.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256959202|ref|ZP_05563373.1| membrane protein [Enterococcus faecalis DS5] gi|256961703|ref|ZP_05565874.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|257079238|ref|ZP_05573599.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257084957|ref|ZP_05579318.1| membrane protein [Enterococcus faecalis Fly1] gi|257087079|ref|ZP_05581440.1| membrane protein [Enterococcus faecalis D6] gi|257090112|ref|ZP_05584473.1| predicted protein [Enterococcus faecalis CH188] gi|257419521|ref|ZP_05596515.1| predicted protein [Enterococcus faecalis T11] gi|257422339|ref|ZP_05599329.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|293383408|ref|ZP_06629321.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293388939|ref|ZP_06633424.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|307269611|ref|ZP_07550949.1| hypothetical protein HMPREF9498_01744 [Enterococcus faecalis TX4248] gi|307275742|ref|ZP_07556882.1| hypothetical protein HMPREF9521_01371 [Enterococcus faecalis TX2134] gi|307291763|ref|ZP_07571635.1| hypothetical protein HMPREF9509_02062 [Enterococcus faecalis TX0411] gi|312901794|ref|ZP_07761062.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312903549|ref|ZP_07762729.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312907764|ref|ZP_07766755.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910382|ref|ZP_07769229.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|312950907|ref|ZP_07769817.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229305051|gb|EEN71047.1| permease [Enterococcus faecalis ATCC 29200] gi|229309252|gb|EEN75239.1| permease [Enterococcus faecalis TX1322] gi|255963529|gb|EET96005.1| predicted protein [Enterococcus faecalis T1] gi|256598815|gb|EEU17991.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256684031|gb|EEU23726.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256949698|gb|EEU66330.1| membrane protein [Enterococcus faecalis DS5] gi|256952199|gb|EEU68831.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256987268|gb|EEU74570.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256992987|gb|EEU80289.1| membrane protein [Enterococcus faecalis Fly1] gi|256995109|gb|EEU82411.1| membrane protein [Enterococcus faecalis D6] gi|256998924|gb|EEU85444.1| predicted protein [Enterococcus faecalis CH188] gi|257161349|gb|EEU91309.1| predicted protein [Enterococcus faecalis T11] gi|257164163|gb|EEU94123.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|291079199|gb|EFE16563.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081720|gb|EFE18683.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|306497215|gb|EFM66760.1| hypothetical protein HMPREF9509_02062 [Enterococcus faecalis TX0411] gi|306507618|gb|EFM76748.1| hypothetical protein HMPREF9521_01371 [Enterococcus faecalis TX2134] gi|306514084|gb|EFM82664.1| hypothetical protein HMPREF9498_01744 [Enterococcus faecalis TX4248] gi|310626792|gb|EFQ10075.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310631056|gb|EFQ14339.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310633425|gb|EFQ16708.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311289655|gb|EFQ68211.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|311291129|gb|EFQ69685.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315027953|gb|EFT39885.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315029470|gb|EFT41402.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315036687|gb|EFT48619.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315144894|gb|EFT88910.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315147495|gb|EFT91511.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315152250|gb|EFT96266.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315156051|gb|EFU00068.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315157800|gb|EFU01817.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315162384|gb|EFU06401.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315167426|gb|EFU11443.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315169473|gb|EFU13490.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315174798|gb|EFU18815.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315575992|gb|EFU88183.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315577896|gb|EFU90087.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315580712|gb|EFU92903.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 366 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|332175167|gb|AEE24421.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 353 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 116/347 (33%), Gaps = 23/347 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++I ++++ + L FF +L I S K S FL + ++ L Sbjct: 21 FLIAWLVVTNGKILLTFFGGIL----IAVLFRESASWIGHKTGFKSKFLLPVTIIAPFVL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + +EL+ ++ A+ + LS +P G E T S + Sbjct: 77 LGLFFAYTAPQISAQGEELMERIPQADT---YINEHLSGLPWGTQLKENLTNLSSADSEV 133 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + S L+ S IF + F + + +L Sbjct: 134 ST-------------VVNAVSSVFSSTLNGFGSFIFALFLGLFLAVNPDWYIKGAVTLVP 180 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ + + + + G++ W G + LGVI A+++ Sbjct: 181 PARRERIREVLGACGRALSGWLVAKIASMVLVGILTTLGLWALGTDLALVLGVIAALLSF 240 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G + F ++ +I G + + I L P L LP T Sbjct: 241 IPNIGPILGFIPAAMVSVITGLDTL-LYVSILYVAVQMIESYVLTPMLQAELADLPPALT 299 Query: 313 FFGLVGGVRTMGLLGLFI-GPVLMALIAVIWKESIMAIKENKEKISS 358 F V +G+ G+ + P+ +A + I K + I E + Sbjct: 300 LFAQVALGAMVGMAGILLAAPLCVAAMVFINKLYVEDILEKPNENRQ 346 >gi|315149794|gb|EFT93810.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 361 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 116/341 (34%), Gaps = 15/341 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G G+LG+F+ + A+I +I E + KEN +K Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKK 360 >gi|222053922|ref|YP_002536284.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221563211|gb|ACM19183.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 347 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 102/322 (31%), Gaps = 16/322 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF+ + +L++L++ + P+ K L +I L + + Y Sbjct: 27 YFIHHTLSALLTSLVLAYLLNPLLKYLELKGLGRLPALGIIYVALAAILTVSSFILAPYL 86 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLK 142 G +P ++ ++ G + W +L + + Sbjct: 87 G-----------HQLQTLKDTIPYYVLNLKGELTQWQFQLSPYYSGEEGIWLLQRGKESF 135 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ++I I +FF + L Sbjct: 136 DRMTQALSGLGYNRLTAIFYGIFNLILAPILIFFMLLYKQMCKDMVKRLIPLGHRRQMID 195 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPI 260 + R + + +GM I ++ A W+ + V G++ +++P G Sbjct: 196 LGRRINSSLERFIIGMAIDCTLVAILTAFALWMLDIQFAVLNGLLAGFASVVPILGVTIA 255 Query: 261 SFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + I G+I A L+ I + I ++P ++ ++L L F ++ Sbjct: 256 VIPPLLIGYAQTGDISVIAKVCLLYFIINVIIEGNLIKPLVMRHTLRLNPLVVIFAVMAM 315 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 MG G+ + L A++ + Sbjct: 316 GELMGFWGIVLAIPLAAVVKIC 337 >gi|302554573|ref|ZP_07306915.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302472191|gb|EFL35284.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 388 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 115/357 (32%), Gaps = 22/357 (6%) Query: 8 PQGIMRWMIMFIILVSLYFL--------KGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M++ + LV+++ L G +L A + P S S+ Sbjct: 2 PRWLPRAMVLALTLVAVFQLGSWAFHQLTGLLINILIAFFLALAIEPAVSWMASR-GVRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + V+ + + L ++ +++ + + Sbjct: 61 GLATFVVFIGVIIVAAGFVTLLGSILADQIIKMIEGF-------PAYLDSVIHWINTHFN 113 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++L + +++ + + A G +F ++ + + F+F Sbjct: 114 TDLKRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVIGGLF-----QLLTIALFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + + S+ A + I ++A+ G+ VP Sbjct: 169 DGPRLRRAICSVLPPARQAEVLRAWEIAVNKTGGYIYSRGLMALISGVAHFVLLQALDVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V +++ IP A+ + + + + A + ++ + + L+P Sbjct: 229 YAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLMFVVVYQQFENYVLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + +F ++ G +G +G I +A + + + Sbjct: 289 KLTSRTVDIHPAVSFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|254777409|ref|ZP_05218925.1| hypothetical protein MaviaA2_22461 [Mycobacterium avium subsp. avium ATCC 25291] Length = 382 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 98/290 (33%), Gaps = 15/290 (5%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + + L F+ + + L +V + + RWL Sbjct: 64 WLDRHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTR---RWL 120 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P + + ++ + + ++L + A + + + + Sbjct: 121 INGPAHLRSEQIDSAGNAAIEALHNNQAK---------LTSGALSTAATVTELVTAAVLV 171 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L FF G +I + + + + + ++A+ + +G Sbjct: 172 LFTLIFFLYGGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVG 231 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + G+P + L + + A IP + F AV + LL KG I A Sbjct: 232 AGLAIMGIPLALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKG-IVYALITLGLLVAV 290 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L+P ++G + + L + G G++G + +A + Sbjct: 291 NQIEAHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFL 340 >gi|311031355|ref|ZP_07709445.1| Predicted permease [Bacillus sp. m3-13] Length = 373 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 121/342 (35%), Gaps = 20/342 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 S ++L P + AL++ F P+ + + ++ +++ + + Sbjct: 24 FSFFYLFSIAYPFIIALVLAFLINPLVNLLEKNGRLPRSLAVFLSIMALFATVVG----V 79 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++E+ + + L+ + + SL+ + L Sbjct: 80 VTLLIVEIVSGTEYLAKVVPGHFETLVVYVEQFVVNNILPLFNQVSTMFHSLEEGQQQSL 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSI--------------IFMIIALFFFYRDGFSISQQ 187 TN + A+ G + ++ IF ++A FF +D + + + Sbjct: 140 LTNIENIGGTVATTVGEFIQSFLTNLPKLLTWIPSVATVLIFSLLATFFISKDWYKLRGR 199 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + K+ + K + +++ + V + + +I Sbjct: 200 FKKITPVKAQGSLTKVFVSLKKAFFGFMRAQATLISITTIIVLIGLLILRVEYAITVALI 259 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +IP G + F I+L I GN+ A L + I + + + + P ++ I Sbjct: 260 IGLVDLIPYLGTGLIFVPWIIFLAISGNLPLAIGLGILYLIVI-VQRQLMEPKILSSSIG 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L L T L G + +G LGL +GPV + + +W ++ Sbjct: 319 LDPLATLVSLFVGFQLIGFLGLIVGPVTVVIFNTLWNAGVIK 360 >gi|168216394|ref|ZP_02642019.1| putative membrane protein [Clostridium perfringens NCTC 8239] gi|182381448|gb|EDT78927.1| putative membrane protein [Clostridium perfringens NCTC 8239] Length = 377 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 121/334 (36%), Gaps = 10/334 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMC 72 I+ LY G P + + I F S +F + + + Sbjct: 31 IMNFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +LF+ + + L++ + L+ +++ + + + L+ Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNLW 150 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + ++ + T+ + ++ F +++ L++I I L + + + Sbjct: 151 KEILKVTSQIVGTS-LGYLLDFTLGITYGVINFFLALILAIYMLASKEILISQLKLIIYA 209 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ ++ ++ LG A+ G++ + +P + + V+ + Sbjct: 210 FVSKNKADRIIELGKMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGV 269 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 270 TALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSAL 329 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 330 WVMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|13474074|ref|NP_105642.1| hypothetical protein mlr4869 [Mesorhizobium loti MAFF303099] gi|14024826|dbj|BAB51428.1| mlr4869 [Mesorhizobium loti MAFF303099] Length = 390 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 124/336 (36%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +F+ + +LYF + FF PV+ A ++ T PI + K+ A + + Sbjct: 31 RSLLVGIFIFMTVYALYFGRAFFMPVILAFLLALTLTPI-VRLLRKRGIPEVVSATLLVL 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +C+ + L + + S + + R L I E T+ Sbjct: 90 LSICVLAIAGYLLSGPVIDLLNNTSSIGQQLTERLAQLRRPLEKIMQVSHQVEQMTETSQ 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P K+ S L S+ + + F G +++ Sbjct: 150 EPGVQKVAVAQ----------SGILSSAASNILSAGTSLTIIFVLSLFLLASGTMFYEKI 199 Query: 189 DSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ V + I L +TII G G V+G W G+P+ + GV Sbjct: 200 IQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTVIGLGLWALGMPNPLVWGVA 259 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPI 305 A+ +P GA ++ V++ LI + + L + +V+ + P +VG + Sbjct: 260 AALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRL 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + F + G +G + L+ +I V Sbjct: 320 EINAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVF 355 >gi|257065925|ref|YP_003152181.1| hypothetical protein Apre_0411 [Anaerococcus prevotii DSM 20548] gi|256797805|gb|ACV28460.1| protein of unknown function UPF0118 [Anaerococcus prevotii DSM 20548] Length = 402 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 109/338 (32%), Gaps = 16/338 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMCLFIVPLLF 80 F P + +I + + F K + S ++ V ++C I+ L Sbjct: 42 FQPFIIGGMIAYLVSIPMNYFERKLRANFPDKKYRKRISALSLFVSWVLIICCLILFLNI 101 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + ++ + S +A + + S + Sbjct: 102 LIPRIVAVIFSFFNRWPEFIRETYETLN--SHAITRPYADKFYEYVNSFGWYEVRNAVMN 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS----QQLDSLGEHLF 196 T+ + + ++I +I+ F + + + +L Sbjct: 160 FITDKKTNLFSLTTGVLNSVSSSLITIFTIIVFSIFVLIYKDMLKTNGTRIIYALMSEKK 219 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 Y K+ + + I + + ++ G+P+ + + + +IP Sbjct: 220 ADYINKVLSLSYNTFKDYIFSRLIAVVTLSALTFVGMFIMGIPNAGVISLFVGVSDLIPI 279 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 PI +S ++ + A ++ I I + + P + G I LP + + Sbjct: 280 FGPIVGAGLSAVIIFLESPVKALIFLIYDVIIQQIQENIIYPAIAGEKIGLPAVWVLAAI 339 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G+ G+ IG + ++I ++ E I + KE Sbjct: 340 TIGGSLFGIWGMLIGIPVASVIYTLFHEFIDNKLKAKE 377 >gi|169343072|ref|ZP_02864099.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169298982|gb|EDS81056.1| putative membrane protein [Clostridium perfringens C str. JGS1495] Length = 366 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 115/336 (34%), Gaps = 4/336 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSE 138 +L + EL+ + V ++I E +L H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTN---YVQNLFTEIMASFKVPEGINSYLPHGDTNKLITFI 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + T +++ A +++ + I L + S+ + Sbjct: 151 GSMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKNLGN 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + I+ + I + I ++ GL+ + + L V+ I MIP Sbjct: 211 EILEFINILNEKIGTYVGIKAIDSLIIGLLAFVGLTVIKSEYALLLSVVVGITNMIPYFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V ++ + + A + ++ I L P L+G + L G+ Sbjct: 271 PFIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTL 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G +G+ +G +M++I + + I + E Sbjct: 331 GGAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|325833632|ref|ZP_08166081.1| putative membrane protein [Eggerthella sp. HGA1] gi|325485556|gb|EGC88025.1| putative membrane protein [Eggerthella sp. HGA1] Length = 429 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 114/339 (33%), Gaps = 14/339 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--S 59 R ++ + ++ +++ L V+ +++I F + Sbjct: 16 RSFLIVWTIVGGILLTGVLVYLFNILSVPIGIVIWSIVIVFCLRGPVNKLEKLGVPRVAG 75 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH----GIPVPRWLSDIPG 115 T +A + V+ L + + + + L+ + Q G + +D+ Sbjct: 76 TTIAYVLMFVVLALVGLLMFSPAFGVGDQFTNLIESIPGYVQTIAGWGNDLYTRYADVLQ 135 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L ++ + TF + + + G ++ +++ F ++ F Sbjct: 136 NDTVQTWINNALD---AIVSWASTFARDSANGVVA-----IGTGLVNTFVALGFALVVAF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + + ++ L + + +V+ G + G+ + Sbjct: 188 WILMELPQLGRECMRLVNPKRHEDLEMLHVTFTRVMGGYIKGTLLQCAIIGVGCVVLFGA 247 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P++ ALG I ++ +IP P A++ + + + + A IV Sbjct: 248 IGIPNYAALGGIAGLLNIIPIVGPWLGGALAAIVGVFVSPWIAVIALGGTIAIQQIVYTF 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + P ++ + + T L+ G G + F G ++ Sbjct: 308 ISPKIMANSVDVHPALTLIALMAGSAIGGAMSGFTGSLV 346 >gi|295400285|ref|ZP_06810264.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|294977560|gb|EFG53159.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] Length = 342 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 26/348 (7%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +I +++ LY ++ +L I F + + + + ++ V+V+ Sbjct: 16 RIVIFSVLIFILYLVRSILNIILLTFIFSFLMNGLVDFISKRIRINRKIIVLLLYVAVVS 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + E+ +L+ ++ + Sbjct: 76 ILVYGVVKYLPVVINEISQLIKQLTEFYSKPQDNIVF---------------------NY 114 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + T ++F + ++ L I+ +I FF + I + Sbjct: 115 IIEQLKHYEITTYLNFGMTYLIKYFSDIGSVGLQILLALILSLFFLLEKERIISFTNRFK 174 Query: 193 EHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ ++ R + IIA + + W+ P LG++ Sbjct: 175 YSKISPFYNELEYFGRKFVRTFGKVIEAQFIIATVNMAITVAGLWIMDFPQLFGLGILIF 234 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP G IS + G I + + A+ + L P L+ LP Sbjct: 235 FLGLIPVAGVIISLFPLCFIAYSIGGIMKVVYILIMIAVIHALEAYVLNPKLMSSKTNLP 294 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 TF L+ G+ GL +G PV + ++ V+ +++ +++ ++ Sbjct: 295 VFYTFIVLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDDDE 342 >gi|75906781|ref|YP_321077.1| hypothetical protein Ava_0558 [Anabaena variabilis ATCC 29413] gi|75700506|gb|ABA20182.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 362 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 124/328 (37%), Gaps = 17/328 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + ++ YF F L+A++ ++P+ F + + T VI + + LF + Sbjct: 26 LLSVLFRYFQSPFTILSLAAILAFLLNYPV--KFFERARITRTQAVVIVLLVTLTLFGIL 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + + +L++K+ P WL+ + E + K P L+++S Sbjct: 84 AVTLVPMLIDQTVQLLNKI----------PDWLTASQANLEHFERFAKQRRLPLDLRVVS 133 Query: 138 ETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A L L+ I +++ F+ G + L +L Sbjct: 134 NQINASIQSVVQQLASGAVGLAGTLLSGLLNFILVVVLAFYMLIYGDRVWYGLMNLLPSK 193 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K ++ ++ FL ++ + + L + + VP + ++ I +IP Sbjct: 194 IRLPLTKSLQLN---FQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFAILIGISELIP 250 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + L++ N + A + + I I D L P L+G I L + F Sbjct: 251 FIGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLGPKLLGNFIGLNPIWIFVA 310 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G GLLG + + I + Sbjct: 311 ILMGYEIAGLLGTLVAVPIAGTIKGTFD 338 >gi|78223969|ref|YP_385716.1| hypothetical protein Gmet_2773 [Geobacter metallireducens GS-15] gi|78195224|gb|ABB32991.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 350 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 114/337 (33%), Gaps = 26/337 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + ++L++ + + + +L++L+I + P K Sbjct: 1 MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERKGLGRIP 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A++ + +F L L Y +++ VPR++ ++ Sbjct: 61 AIAILYLCIAVIMFFS-LFALIPYLNHQLEAF----------PRAVPRYVQNL---ERVM 106 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG-------MIFLDYCLSIIFMIIA 173 E+W LS T+L + D + + A L +++ I Sbjct: 107 EVWKARLSPYYG--SDEGTWLIASAQDSLKKLALDVSGKGYQELKAALFGLFNLVLAPIL 164 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +FF + H ++++ + + + + G++ A Sbjct: 165 VFFMLSSKQFFKDLILRFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALAL 224 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELF 290 +L G+ + G + +++P G ++ ++ Y + + I + Sbjct: 225 YLLGIEFPLLNGFVAGFASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVI 284 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 I ++P L+ G ++L L F L+ MG G Sbjct: 285 IEGNLIKPLLMRGTLRLNPLAVVFALMALGELMGFWG 321 >gi|323496843|ref|ZP_08101880.1| hypothetical protein VISI1226_21744 [Vibrio sinaloensis DSM 21326] gi|323318102|gb|EGA71076.1| hypothetical protein VISI1226_21744 [Vibrio sinaloensis DSM 21326] Length = 357 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 124/349 (35%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ +S+ T V+ Sbjct: 15 DPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSQ--LSRLGVPRTLAVVL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L +V + L ++ LV+ + + + +++++P + + Sbjct: 73 VILGFSSLMLVAVFGLVPTIWQQVGNLVNDIPTMY---LGLQSFIAELPQRYPELDNFQI 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K + +T + S + +I + + +FF +D + Sbjct: 130 VESLVTNAKNQAIGMGETVLKGSLASLVS-----LATLAVYLILVPLLVFFLLKDKQEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + +K + + + I + G + + G V + + + V L Sbjct: 185 EMASGILPRNRRLAYK-VWHEMNEQISNYIRGKVMEILIVGGVSYVTFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+ + L G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +W +++ Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHDEDD 352 >gi|302544660|ref|ZP_07297002.1| integral membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302462278|gb|EFL25371.1| integral membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 369 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 117/346 (33%), Gaps = 11/346 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + V+L+FL ++ ++ LIIG + AV A+ + Sbjct: 32 LLVLGMTAVALWFLGQMWS-IVWPLIIGLLLTTLTWPLTRFLRGHGWPPAVAASAVTVLF 90 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +V + + + V Q V W + P + +++ S L Sbjct: 91 LLVATGVVALIAVPVASQSGELVDGVTQGMHKVREWAAGPPLNIDDAQIAQATDSAAARL 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + T + ++ + + +FFF +DG L Sbjct: 151 QKSASSMVTTVVTGV---------NAVVGGLVTAVLALFLMFFFLKDGPRFLPWLARQLP 201 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + ++ + + + +G + GVP + L V+T + A Sbjct: 202 GRLATDVPTVAARAWDTLGAFVRSQALVGLLDAVFIGLGLLILGVPLVLPLAVLTFVSAF 261 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GA + + ++ +A + + +P + + L Sbjct: 262 VPIVGALFAGFVAVLIAMVANGPMDALITLAIIVVVQQLEGNVFQPMIQSRGLGLHAAVI 321 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + + ALIAVIW + + ++ Sbjct: 322 LLAVTLGASLAGVVGSLLAVPVAALIAVIWNYLREQLSDPLQEPEH 367 >gi|291546514|emb|CBL19622.1| Predicted permease [Ruminococcus sp. SR1/5] Length = 293 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 5/232 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +P + L + + S G I I A + + Sbjct: 29 IMKLVDQVQFNPDQAIKWGISLLGNGAGNMMNTTMSAVGSIVSGLATFFIAFSFACYVLF 88 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL----GMTIIAIGEGLVLGSAYW 234 + + Q+ + P V + TF G + A+ G + Sbjct: 89 QK-EKLHVQIRKVFFAFLPKKKADAFLKVCSLTYRTFANFLAGQCLEAVILGCMFVVILS 147 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P + +GV+ A A+IP AV +L+ N A + + I Sbjct: 148 ILRIPYALLIGVLIAFTALIPIFGAFIGCAVGSFLIFMVNPKQAILFIIVFLVLQQIEGN 207 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P +VG + LP + + G MG++G+ + L+++ I++E + Sbjct: 208 LIYPHVVGESVGLPSIWVLAAVTIGGNLMGIVGMLVFIPLLSVFYTIFREFV 259 >gi|295699812|ref|YP_003607705.1| hypothetical protein BC1002_4201 [Burkholderia sp. CCGE1002] gi|295439025|gb|ADG18194.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 88/216 (40%), Gaps = 4/216 (1%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSLGEHLFPAY 199 G D A G+ + ++I+++ I F +DG + +L Sbjct: 133 ETGSDKAVPLARSLGLGVVHAASNLIYLVLIPILSFLLIKDGERMRDAFLALLNRRHRVL 192 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 W +I V ++ + +++ G A+ L GVP L V ++ +P P Sbjct: 193 WSEIVDDVNVLLSKYVRALLFLSLATLFGYGVAFSLLGVPYAFLLAVSAGLLEFVPFAGP 252 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ A+++ + + + L ++ + D L P+L+ +++ GL+ G Sbjct: 253 LAAVAITLVVAVFSGYPHLLWLVIFIGLYRLFQDYVLNPYLMSEGVEVSPFLVIVGLLAG 312 Query: 320 VRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKE 354 + G+ G+F+ PV+ L VI + + +++ Sbjct: 313 DQLGGVAGIFLAVPVIATLKIVIGRARVFYSASHEQ 348 >gi|325263797|ref|ZP_08130530.1| membrane protein [Clostridium sp. D5] gi|324030835|gb|EGB92117.1| membrane protein [Clostridium sp. D5] Length = 449 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 49/384 (12%), Positives = 115/384 (29%), Gaps = 34/384 (8%) Query: 9 QGIMRWMIMFIILVSLYFLK-----------------GFFAPVLSALIIGFTSWPIYSSF 51 Q R M +F+++ + G P++ L I + PI Sbjct: 36 QKFSRGMTIFVVIAACIIFYFALLRLPAISGVFKEIFGVLKPIVYGLAIAYLLNPIVDFV 95 Query: 52 ISKKEE---------------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 S + ++ + I + +++++ V Sbjct: 96 EEHLRPFLEKKLQDQKRIHAISRGTGIFAGVLVLLFIIIALFNMMIPELYGSIRDMILTV 155 Query: 97 VLANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + D G S + + Q+ + + Sbjct: 156 PSQLNQLVDKVMEMNSQDSTLGQLLSNILKEATDFIQTWMRTDLLNQINVVMSNLTVGVI 215 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 L+ + II I LF + + + ++ + ++ ++ Sbjct: 216 NIISELLNVVIGIIISIYVLFSKEKFASQSKKLVYAVFKPSHANMILHLTIKSNEIFGGF 275 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 +G I + G++ + +P + + VI + +IP P S L++ + Sbjct: 276 IIGKIIDSAIIGVLCFIGLSMLKMPYTLLVSVIVGVTNVIPFFGPYIGAIPSAILIMLTD 335 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 L+ + + + P ++G L F ++ G G++G+ +G Sbjct: 336 PKMGIYFILFILVLQQLDGNVIGPKILGDSTGLSAFWVVFAILLGGGLFGVIGMILGVPT 395 Query: 335 MALIAVIWKESIMAIKENKEKISS 358 A+I I I + E K+ + Sbjct: 396 FAVIYYIINMLINHMLEKKKLPTE 419 >gi|315650632|ref|ZP_07903691.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487107|gb|EFU77430.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 411 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 120/328 (36%), Gaps = 21/328 (6%) Query: 31 FAPVLSALIIGFTSWPIYSS-----------FISKKEESSTFLAVIATVSVMCLFIVPLL 79 + V +++ F + P+Y K ++ IAT++ + + I + Sbjct: 46 VSSVFYGVVMAFLTAPVYDKISDRLAKIFSSLFPKWKKPIKLAKFIATLACLVILIFVIF 105 Query: 80 FLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + E+ +S V+ +G + + WL DI +L + + Q + Sbjct: 106 ALIMMIIPELVNSISNVINYAPNGMLKLEDWLKDILNKNP--DLEKLVIGNYQDISDRLS 163 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYC---LSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F TN + + + L+ ++II ++ + + +++ Q + + Sbjct: 164 DFATTNVLPNVNTYIKNLSSGVLNALGVIVNIIIGMMVMMYLLNMKTTLASQAKKIVYAI 223 Query: 196 FPAYWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I+ F +G I +I G++ + +P + + V+ + Sbjct: 224 AGVKIGNEIVTEARYIKDMFEKFIVGKIIDSIIIGIINYIFMAVIHMPYALLISVVVGVT 283 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P SI LL+ + A +W + + + P ++G LP Sbjct: 284 NVIPFFGPFIGAIPSIVLLLLISPLTALQFAVWILVLQQVDGNIIGPKILGQTTGLPSFW 343 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIA 339 F ++ G++G+ I A+I Sbjct: 344 VLFSILLFGGLFGIVGMIIAVPTWAIIY 371 >gi|52081417|ref|YP_080208.1| membrane protein YtvI [Bacillus licheniformis ATCC 14580] gi|52786793|ref|YP_092622.1| YtvI [Bacillus licheniformis ATCC 14580] gi|319647325|ref|ZP_08001547.1| YtvI protein [Bacillus sp. BT1B_CT2] gi|52004628|gb|AAU24570.1| conserved membrane protein YtvI [Bacillus licheniformis ATCC 14580] gi|52349295|gb|AAU41929.1| YtvI [Bacillus licheniformis ATCC 14580] gi|317390672|gb|EFV71477.1| YtvI protein [Bacillus sp. BT1B_CT2] Length = 371 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 102/340 (30%), Gaps = 12/340 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + Y+ P + ALI+ P I + Sbjct: 16 LFLTAVCGAVGYYSFPLTYPFVIALILAIMINPFVEWLDKLTGFPRGVNVGIVLFGFLTA 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L + + L + L +EL + Sbjct: 76 GAGFLTLVVAEIVSGTAYLAKILPLQFNKAALYIESFFTNQIMPLYNELAAFFDGLEAAQ 135 Query: 134 KILSETFLKTNGIDFIPRFAS----------RFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + T ++ G + A F + +IF ++A FF +D Sbjct: 136 QESIITQVQNLGSELASGTALLLSKILETVPLFFAFLPNMAAVLIFSLLATFFISKDLHK 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + S+ + + + + + + +++ + V VA Sbjct: 196 IQNKARSVLPDRLISGAAAVYAELKRALAGFVKAQLTLVAMTMVLVLIGLSVLKVNHAVA 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + ++ ++P G F +YL + A L + I + + + P ++ Sbjct: 256 IAFLIGLVDLLPYLGTGSVFVPWIVYLAAAKQLPLAIGLGILY-IVVLVFRQLAEPKILS 314 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L T L G + G LGL +GP L+ LI ++ Sbjct: 315 RSIGLHPLGTLIALFAGFKLFGFLGLIMGPALLVLIQALF 354 >gi|325267983|ref|ZP_08134630.1| permease [Kingella denitrificans ATCC 33394] gi|324980524|gb|EGC16189.1| permease [Kingella denitrificans ATCC 33394] Length = 358 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 123/336 (36%), Gaps = 8/336 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ L ++Y L P + A ++ + P+ K + + ++ + Sbjct: 14 IIGIAVIGSFLFAVYHLSDVLTPFIVAAVLAYILNPLVCKIE-KLGINRSRASMWVMLFT 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L + LL + + ++ ++ ++ + +P + + Sbjct: 73 FFLIVALLLVIVPMLLQQLHLIIQRIPKLVDYVQT-----QALPWLNQKFDKHIILDENT 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + + + G ++I + + L++F D + + Sbjct: 128 ITAWLRANASVIQGNLQKTLPAVMQSGGALASGLSNLILLPLLLYYFLLDWSHWEDGVRT 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + +I+ + V+ G ++ + G++ G+ L G+ S A+G++ I Sbjct: 188 MIPRRYLDGYNRIAGNMDTVLGEFLRGQLMVMLIMGMLYGTGLMLTGLDSGFAIGMVAGI 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLP 308 + +P + ++ + L +WG + + + P +VG I L Sbjct: 248 LVFVPYLGAFTGLLLATLAAVLQFNTWGGLLAVWGVFAVGQLLESFLITPKIVGDRIGLS 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + G +G+ I L A+ V+ +E Sbjct: 308 PFWVIFSLMAFGQLFGFVGMLIALPLAAICLVLIQE 343 >gi|331083327|ref|ZP_08332440.1| hypothetical protein HMPREF0992_01364 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404408|gb|EGG83953.1| hypothetical protein HMPREF0992_01364 [Lachnospiraceae bacterium 6_1_63FAA] Length = 379 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 116/334 (34%), Gaps = 6/334 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F A I+ + SK + + L + + LF+V +L++ Sbjct: 41 IVFPFLLGAAMAFILNVPMSFMEKRLFSKTKGKAKKLKRPICLVLAILFVVAILWIVLLV 100 Query: 86 ML--EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ + S V I + RW DI E+W L I + Sbjct: 101 VIPEVASTVASLSVNIEAALIKLQRWAMDIFEDNKQIEVWIASLQFDWDGIIHTAFGFLK 160 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK-- 201 NG + ++ ++ + + ++ Q+ + F Sbjct: 161 NGAGNVLNSTMTVAKTVINSVMNFCVAFVFACYILLQKEKLAVQIQKILYAFFSKKVVTK 220 Query: 202 --KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I+ + K + G A+ G + + + P + +GV+ A A+IP Sbjct: 221 VLDIASLSYKTFANFVTGQCCEAVILGTMFFISMSILRFPYALLVGVLIAFTALIPIFGA 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + +L++ + A + + + + P +VGG + LP + + G Sbjct: 281 FIGCFLGTFLILVADPMKAIAFVILFLVLQQVEGNLIYPHVVGGSVGLPSIWVLVAVTVG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 MG++G+ + + +++ +++E + + + Sbjct: 341 GSLMGIVGMLVFIPICSVLYALFREMVYKRLKER 374 >gi|32471020|ref|NP_864013.1| permease [Rhodopirellula baltica SH 1] gi|32396722|emb|CAD71687.1| predicted permease [Rhodopirellula baltica SH 1] Length = 412 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 119/334 (35%), Gaps = 9/334 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 MR + ++L +LY+ + PV +A+++ T PI + S A+ ++ Sbjct: 23 MRICAVMLVLYALYYARSLVIPVATAIVLYLTLRPI-VRHAKRIGVPSPVGAIGIIAGIL 81 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + +A Q + L D+ EL Sbjct: 82 LTLGLGTYLVLEPAKETIGAAPQHLAVAKQKLSFITDRLKDVDQAT--EELAETEDVAAG 139 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + ++ G + L+I + L+F G + + + Sbjct: 140 EVASEKPVPVEIKQPTWTSGWSYLSGTGNVVSFLTICIAL--LYFLLATGDDLLRSVMRS 197 Query: 192 GEHLFPAYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ V + + S ++ I G G+ + W+ G+PS + GV+ Sbjct: 198 LPNFSSRRKLVEVIENVQEGLGSYLAQVSAINAGLGVCVAVVMWMLGMPSPIMWGVMAFA 257 Query: 251 MAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP I + + LL + A + L + + + P ++G + + Sbjct: 258 FNFIPIVGAIAGALIIFFVALLNFEPTYYAFVVTLAFMTLTSLEGQFITPAILGRSMSMS 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + F +V G++G+F+ P+L+A Sbjct: 318 PVLVFLSIVVWGWMWGIMGVFLSVPILIAARMAC 351 >gi|145637214|ref|ZP_01792876.1| lipoprotein NlpI [Haemophilus influenzae PittHH] gi|148827377|ref|YP_001292130.1| hypothetical protein CGSHiGG_03820 [Haemophilus influenzae PittGG] gi|260580878|ref|ZP_05848703.1| lipoprotein NlpI [Haemophilus influenzae RdAW] gi|145269659|gb|EDK09600.1| lipoprotein NlpI [Haemophilus influenzae PittHH] gi|148718619|gb|ABQ99746.1| hypothetical protein CGSHiGG_03820 [Haemophilus influenzae PittGG] gi|260092501|gb|EEW76439.1| lipoprotein NlpI [Haemophilus influenzae RdAW] gi|301168892|emb|CBW28486.1| predicted inner membrane protein [Haemophilus influenzae 10810] gi|309972617|gb|ADO95818.1| Putative permease (PerM family) [Haemophilus influenzae R2846] Length = 349 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 117/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPKNYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + +K + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFK-VWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|301168518|emb|CBW28108.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 348 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 109/346 (31%), Gaps = 17/346 (4%) Query: 1 MRETMLNPQGIMRWMI---MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M+ M P+ + + + L SL+ P+ A ++ P+ + + Sbjct: 1 MQRAMSKPEKVRLVFFILGLILFLFSLWLFPRVSIPLSVAYVVSLIFNPV-VPMVMRFGL 59 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + I ++++ LF PL+ + E + + + + L+ Sbjct: 60 KKSTSVNIVFLAILFLFTYPLIKITPTITNEAQNVQYYLPKVESFLKTEYKNLTSKIEEK 119 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + L + + T + ++ + + +FF Sbjct: 120 TGYVVGNEILDNSLDYGQKATTEILLQVPKYLGSIIEWI-----------FLVPLFVFFI 168 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG + + + +S + + + A G+++ + Sbjct: 169 LKDGKEFKSNFLKIVPNSMFERFYYLSHQFNRQLGDYIFAKFVEASIVGIIITTGLLFLD 228 Query: 238 VPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KT 295 V + LG++ +IP PI I+ L + I +D Sbjct: 229 VRFALLLGLVAGFTNVIPYLGPIIGTIPAIIFGLAEYGWGPTFGAITILYIVANAIDIAL 288 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P LV + L L ++ G G++G+ I L A +I Sbjct: 289 VFPILVSKIVNLHPLMVVISVILGSTFFGVVGMIISIPLAAAFKLI 334 >gi|89514122|gb|ABD74918.1| hypothetical protein [Sinorhizobium fredii] Length = 122 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 64/121 (52%) Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + G +T +++ +P P+ + +V++ L I+G ++ + + WG + + +D + P Sbjct: 1 PQALLFGFLTFVLSFVPIDPPLVWGSVALGLFIRGAVWWSFFVAAWGLLLVSSIDNVIGP 60 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +++G P L FFG +GGV G +G+F+GP L+A+ ++ A E + + Sbjct: 61 YVLGKTDNRPVLLGFFGFLGGVVAFGFIGIFLGPTLLAVAYSLFLGWTTAEVEERRHPTE 120 Query: 359 N 359 Sbjct: 121 Q 121 >gi|255100081|ref|ZP_05329058.1| hypothetical protein CdifQCD-6_04695 [Clostridium difficile QCD-63q42] Length = 350 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I ++ + +Y + AP II PI +K + ++ + + + Sbjct: 19 FCIYTLLFIFIYKAFPYIAPFFLGAIIALMINPISQKLENKFHINKGISTLVLSFLAVAI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + M E+ ++ + + + + S + Q + Sbjct: 79 VSTVTTIIVINSMKELMGFLNNISANPEDISNTIMYFLNKINDFMKSFQEIANFDVEQLV 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S ++ + + II + IA +F +D I ++ Sbjct: 139 NKFSGEVMQIT--KNLLTSILGLATSIPYIIIFIITLFIATYFIAKDLDKIENSFYNMFT 196 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + + TI+ + ++ L G+ + +G + A+M + Sbjct: 197 VDVRKKVKNVKKEAGLSLVGYIRAYTILMAITFFAIWGSFALFGLKYGLIVGFVGALMDL 256 Query: 254 IPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP I + V +Y + N F A + + L ++ + L P LV + L L T Sbjct: 257 IPFLGIITIYLPVIVYYFLIKNYFIAISMTVI-FFVLSLIREILEPKLVSVNVGLNPLAT 315 Query: 313 FFGLVGGVRTMGLLGLFI 330 + G++ G++G+ Sbjct: 316 LAAIFIGIQVKGIIGVIF 333 >gi|328675694|gb|AEB28369.1| Putative permease PerM (YfgO) [Francisella cf. novicida 3523] Length = 368 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 118/356 (33%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + V+ Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 73 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSTLKTSLEELSVKYPTILTEDRI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 133 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYVGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L +K K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMLRNHLKGKKTQTDINL 367 >gi|293375475|ref|ZP_06621754.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325842418|ref|ZP_08167677.1| putative membrane protein [Turicibacter sp. HGF1] gi|292645875|gb|EFF63906.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325489646|gb|EGC92009.1| putative membrane protein [Turicibacter sp. HGF1] Length = 362 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 107/313 (34%), Gaps = 10/313 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A ++ + P+ I + + + + + + + E+ Sbjct: 49 LFPFLIAFLLAYVIHPL-ILCIDRLRLPRVLSVFLFYLFIFGSLYGVISWFLPTILRELH 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +LV + + + I + + L S T ++ Sbjct: 108 DLVMNLPTY----LEAIQTQIMIFDQKFNLNVSQYFLGDYSSWMSTLTTHMREITGWTFN 163 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S G ++II + IALF+F +D + L + F + I+ ++ + Sbjct: 164 MIFSIIGS-----LVNIIIVPIALFYFLKDFEKMMHGLLKIVPRRFRHHAVSIAGLLDES 218 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G+ +I + ++ +AG+ + GV+ + IP P + Sbjct: 219 LGSYIRGVFLIMVTLSIIATILLMIAGIDYALLFGVLIGLTDFIPFIGPFIGAIPVVVFA 278 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + + AI I L+PF++G + + L +V MG G+F Sbjct: 279 LSISWNKVIIVIIILAILQCIEANFLQPFIIGRNLDMHPLLIMMIMVVAATIMGFQGVFF 338 Query: 331 GPVLMALIAVIWK 343 + +I + Sbjct: 339 ALPVFLMIRTFSR 351 >gi|114328699|ref|YP_745856.1| hypothetical protein GbCGDNIH1_2035 [Granulibacter bethesdensis CGDNIH1] gi|114316873|gb|ABI62933.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 438 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 116/341 (34%), Gaps = 21/341 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++F + ++L+ P + A I + P+ + A + +++ L + Sbjct: 96 VLFAVWLTLHLFASILLPFVMAGGIAYFLDPLAGRLE-RLGLPRGVAAGLLIAAMILLGL 154 Query: 76 VPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L L+ + ++ L+S++ WL + + P + Sbjct: 155 LFALLLYPLIVAQLGILLSRLPAYVALVRDTAIDWLGRV-----------QERLGPGFVD 203 Query: 135 ILSETFLKTNGIDFIPRFASRF------GMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + F G + ++ + F+ RD ++ Sbjct: 204 AKLQDVVSVQAGSLLTVFGRALSRVIGGGFALFNVLTVLVVTPVVAFYLLRDWPKAVARV 263 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + +R + +++ + G + + G+ G+ + LG+ T Sbjct: 264 DLWLPRRYAGVVRAQAREINRILSAWLRGQALCCLMLGVFYAVGLSFVGLDLGLLLGLAT 323 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIK 306 I++ IP + A S L + + G + + + P +G ++ Sbjct: 324 GILSFIPYVGTVLGGAGSFALAMAQFHDWNRVALVAGVFLAGQILENYVIYPRFLGDRVE 383 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + F L G G LG+ + + A+I V+ + + Sbjct: 384 LHAVWVIFALFAGGAAFGFLGVLLAVPMAAVIGVLSRFWLR 424 >gi|16080168|ref|NP_390994.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311057|ref|ZP_03592904.1| hypothetical protein Bsubs1_16941 [Bacillus subtilis subsp. subtilis str. 168] gi|221315383|ref|ZP_03597188.1| hypothetical protein BsubsN3_16852 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320300|ref|ZP_03601594.1| hypothetical protein BsubsJ_16825 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324583|ref|ZP_03605877.1| hypothetical protein BsubsS_16971 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928520|sp|O32086|YUBA_BACSU RecName: Full=UPF0118 membrane protein yubA gi|2635600|emb|CAB15094.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 388 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F + +SI+ + LF+ +DG + + + + Sbjct: 170 TGVGNFIGALTEIIISIVTVPFILFYLLKDGRKLPVYILKFVPTRLKEQTYTVLSEMNHR 229 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G I++ G +L Y + G+ L VI A +++P P +I + Sbjct: 230 LSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIA 289 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + L + I I K + P ++G + + + F L+ + G++G+ + Sbjct: 290 IVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIIL 349 Query: 331 GPVLMALIAVIWKESIMAIK 350 A+ VI K Sbjct: 350 AIPGYAVAKVITTHLFDWFK 369 >gi|321312655|ref|YP_004204942.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|320018929|gb|ADV93915.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 388 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F + +SI+ + LF+ +DG + + + + Sbjct: 170 TGVGNFIGALTEIIISIVTVPFILFYLLKDGRKLPVYILKFVPTRLKEQTYTVLSEMNHR 229 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G I++ G +L Y + G+ L VI A +++P P +I + Sbjct: 230 LSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIA 289 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + L + I I K + P ++G + + + F L+ + G++G+ + Sbjct: 290 IVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIIL 349 Query: 331 GPVLMALIAVIWKESIMAIK 350 A+ VI K Sbjct: 350 AIPGYAVAKVITTHLFDWFK 369 >gi|258626151|ref|ZP_05720999.1| permease PerM, putative [Vibrio mimicus VM603] gi|258581506|gb|EEW06407.1| permease PerM, putative [Vibrio mimicus VM603] Length = 396 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 122/353 (34%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T VI Sbjct: 55 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTVAVVI 112 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 113 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQ---QFITSLPE----RYPELA 165 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 166 HLEIVESVISNAKNKVLGMGETVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKQEML 224 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + I G V + + + V L Sbjct: 225 RMASGVLPR-NRKLATKVWEEMNQQISNYIRGKVLEIIIVGTVSYITFAILDLRYSVLLA 283 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 284 VAVGLSVLIPYVGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPILFSE 343 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ +WK E + I Sbjct: 344 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLEDEPEASI 396 >gi|302876888|ref|YP_003845521.1| hypothetical protein Clocel_4095 [Clostridium cellulovorans 743B] gi|302579745|gb|ADL53757.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 387 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 116/341 (34%), Gaps = 10/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA-----VIATVSV 70 ++ ++ L F A I+ + F + L + + + Sbjct: 35 VLGVLSYCYTLLLPFILGGCIAFILNIPMNYFSNKFSRVQGNKLGSLVRKGNKIFSLILS 94 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSH 129 L + ++ + + ++ E ++ ++ + V W+ ++ + Sbjct: 95 FVLVLGVIILVLALVIPQIAETAKRLPTTFENASVIVKSWIENVDWLSNDIINKINVIEI 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + NG + FL+ ++ ++ + D ++S+Q Sbjct: 155 DWNSVFNEIKSSVFNGAGSMISSTIGVATSFLNGVVNFSLGLVFSIYLLLDKENLSKQCK 214 Query: 190 SLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + P +I+ + K + G + A+ G + + P + + Sbjct: 215 KILYAFLPKEKVVSILEIASLANKTFSNFLTGQCVEAVILGFLFFVTMSILHFPYAMVVS 274 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V A A+IP + +L++ N A + + I + P +VG + Sbjct: 275 VFIACTALIPVFGAFIGGGLGFFLIVMDNPTKALLFLVLFLVLQQIEGNLIYPRVVGNSV 334 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G + MGL G+ I L ++ V++++++ Sbjct: 335 GLPSMWVLVAITLGGKLMGLTGMLIFIPLCSVAYVLFRKAV 375 >gi|300812578|ref|ZP_07092995.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496451|gb|EFK31556.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 377 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 7/247 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L+ + + S +L+ G + + + + F +I + Sbjct: 127 LESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIFAIY 186 Query: 177 FYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F DG I+ L +L K + G I A GL++ A Sbjct: 187 FLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRAFSGYIRGQIIDAFIVGLLVSLA 246 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +A VP + +G++T + +IP PI + I A + + + + + Sbjct: 247 MLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAI 306 Query: 293 D-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L P L+ I + L ++ G G +G+ I + AL+ ++ I ++ Sbjct: 307 DGNILNPKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPIGALLKTEFERLIAYRQK 366 Query: 352 NKEKISS 358 EK Sbjct: 367 QLEKSKE 373 >gi|260779371|ref|ZP_05888263.1| permease PerM [Vibrio coralliilyticus ATCC BAA-450] gi|260605535|gb|EEX31830.1| permease PerM [Vibrio coralliilyticus ATCC BAA-450] Length = 358 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 116/349 (33%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ +S+ T ++ Sbjct: 15 DPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSQ--LSRLGIPRTLSVIL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L +V + L ++ L++ + L + + Sbjct: 73 VILGFTSLMMVAVFGLVPTIWQQVGNLINDIPSMYTG-------LQKVIAELPQRYPELD 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +SL ++ + G + + I + +I + + +FF +D + Sbjct: 126 NFQIVESLVTNAKNQVIVMGETVVKGSLASLVSIAT-LAVYLILVPLLVFFLLKDKQEMI 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + I + G + + G V + + + V L Sbjct: 185 AMASGVLPR-NRKLATKVWHEMNDQISNYIRGKVMEILIVGGVSYVTFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+ + L G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +W ++ Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSNDEDE 352 >gi|150025670|ref|YP_001296496.1| putative transporting permease [Flavobacterium psychrophilum JIP02/86] gi|149772211|emb|CAL43687.1| Putative transporting permease [Flavobacterium psychrophilum JIP02/86] Length = 362 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 125/351 (35%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + ++L LY ++ ++ +LI+ + P K + S+T V Sbjct: 12 KALLIIVAIAMLLFFLYQIQSVIIYLIVSLILTLITSPFVGFLKRKLKFSNTIAVVFTMF 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M F+ ++ + + + L + ++ +++ + Sbjct: 72 LLMLTFVGLIMMFVPLILAQSENLSLLDTKSIENSATQL---------TNQFKIYLTNHH 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +FIP + + + + ++ FFF +D + + Sbjct: 123 INAGNLLNFSSLTSKINFNFIPTILNSILGTISSFGMGLASVLFITFFFLKDKIIFTNGM 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ F+G+ I ++ + GV + + + Sbjct: 183 KIILPDNHEEKILNSFTKINEMLSRYFIGLLIQLSIVFILYLIVLLIFGVENAFVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLI--------KGNIFNATCLFLWGAIELFIVDKTL-RPF 299 A++ ++P P+ + ++ L + + +I T ++G + ++D + +P Sbjct: 243 ALLNIVPYVGPLIGSVLAAILTMISNLGGDFQNDILPTTLYVMFGFWVVQLIDNNISQPL 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L F + G+ G+ I ++ VI KE + K Sbjct: 303 IFSKSVNSHPLEIFLVTLISGFLFGITGMIIAIPFYTMLKVIAKEFLPENK 353 >gi|110800682|ref|YP_695022.1| hypothetical protein CPF_0568 [Clostridium perfringens ATCC 13124] gi|110675329|gb|ABG84316.1| putative membrane protein [Clostridium perfringens ATCC 13124] Length = 366 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 116/336 (34%), Gaps = 4/336 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSE 138 +L + EL+ + V ++I E +L + + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTN---YVQNLFTEIMASFKVPEGINSYLPYGDTNKLITFI 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + T +++ A +++ + I L + S+ + Sbjct: 151 GSMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIVFGKNLGN 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +I+ + I + I ++ G++ + + L V+ I MIP Sbjct: 211 EILEFVKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V ++ + + A + ++ I L P L+G + L G+ Sbjct: 271 PFIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTL 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G +G+ +G +M++I + + I + E Sbjct: 331 GGAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|312144391|ref|YP_003995837.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] gi|311905042|gb|ADQ15483.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] Length = 352 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 122/325 (37%), Gaps = 8/325 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P+L ++ + + P+ K + T++V+ F+ + Sbjct: 36 VLSFVLLPLLFSIFLYYLLRPLVIILEKKIKIR--------TIAVIISFLAAASIITLII 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 L + + + + +I + + L +L+ ++ + Sbjct: 88 YLGGNIIYEQSRELGGSYELIYSSIVEIFENIRDFINIERGLIDDFNLRERLISYTDSII 147 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L I+ + LF+ +D I Q+ + + +++ Sbjct: 148 MRLSTYNYMGIFSSLTNIGLIILLIPFVLFYLLKDDKEIYQKTIEMIPGSKRKQIEVLAQ 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ ++++ V+ + + + S + L +I I ++IP P Sbjct: 208 DIDKLLSDFITSQLLVSLFTAFVMLIGFLIIRLASPLVLALIVLITSLIPIIGPAIGILP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + +I A + + I ++ +RP + G + + L F ++ GV GL Sbjct: 268 ALFIALTESIITALLVIIIFIIAQYLEGNLIRPLIQGKSMDIHPLVVLFVVLTGVYLFGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 +G I L A++ +I++E I+ K Sbjct: 328 IGALISVPLYAVLRLIYQERILKKK 352 >gi|307546172|ref|YP_003898651.1| hypothetical protein HELO_3582 [Halomonas elongata DSM 2581] gi|307218196|emb|CBV43466.1| conserved hypothetical protein [Halomonas elongata DSM 2581] Length = 371 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 112/331 (33%), Gaps = 12/331 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 AP L+AL+I F + ++ ++V+ +F+ L L ++ + Sbjct: 41 LAPFLTALVIAFLLQGAVNGLTRRRVPH--------LLAVLLVFLGFLGILLAMALILLP 92 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + +++V Q + + + A Q+ ++ + G Sbjct: 93 LIWNQLVNLLQETPRMFASGQSLLDDLQARYPQLITPDQIQTWIGMAGREVTQLG-QRAL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + L + ++ + I +FF +D + SL +I + Sbjct: 152 SLSLSSLGNVLSLIIYLVLVPILVFFMLKDRDRLVGFAVSLLPQ-RRELMTRIWHEMDDQ 210 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I + G I I G V + G+P L V+ + +IP GA ++ V+ Sbjct: 211 IANFVRGKFIEIIIVGSVSFFTFMFFGLPYSALLAVLVGLSVLIPYIGAAVATLPVAAVA 270 Query: 270 -LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + + + L P L + L + ++ G G+ Sbjct: 271 GFHFGISDQFVYVLIAYGVIQALDGNVLVPVLFSEAVNLHPVSIILAVLFFGGIWGFWGI 330 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F L L+ + I++ +E++S+ Sbjct: 331 FFAIPLATLLKALVYAWPRGIQQRREEVSAE 361 >gi|270293100|ref|ZP_06199311.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270279079|gb|EFA24925.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 362 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 112/332 (33%), Gaps = 7/332 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + ++ +I F + + ++++ +F+ +L + + Sbjct: 34 LFDVISTLIYGAVIAFVLNVPMKKIEQYLVKLKVKAELRRPIAMVLVFLALILIVIALLV 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L + L + V L + G LS S + + I Sbjct: 94 LVLPTLAQTISQLGTVLSTVLTQLEKLLGSSEFVT--KDMLSTIVSGIQGQSSSISQALI 151 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY----WKK 202 F+ S G ++ +I+ F F ++ L + P Sbjct: 152 GFLSGLTSNIG-NIFSSLMNAFLIIVFTFLFLSSKEHLAAMTSRLLKVFLPEKVVIKLTY 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I ++ + + I A+ G+++ Y + G+P V G+ +++ IP P+ Sbjct: 211 IGQVALETYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGVMTGIFAGVLSFIPYVGPMIA 270 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + + A L + I + P +VG I LP + T G Sbjct: 271 CVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQSIGLPAIFTLAAASIGGNL 330 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GLLG+ + A+I + KE ++A + + Sbjct: 331 FGLLGMIFFTPIFAVIYRLVKEFVVAKENQLD 362 >gi|72162280|ref|YP_289937.1| hypothetical protein Tfu_1881 [Thermobifida fusca YX] gi|71916012|gb|AAZ55914.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 435 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 132/355 (37%), Gaps = 21/355 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ +IL +++ PV+ A+ + P + I+ + Sbjct: 52 RLLIIGVVIALILWGAIYIRVVTIPVILAVFVTALLMPPTQWLRDR-GLGRGLSTTISVL 110 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F + + + +V+ + N+ + + + + W Sbjct: 111 GAVIIFGGVVTLIVLPAISGFDAIVASI---NESVVTLQQIAASFGMDDQLINEW----- 162 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ +++ N I A + + + II +I+ +F G + + + Sbjct: 163 -----IASAQQWIQRNSSQLISG-AWAGAVAVGEVLVGIILVIVLTIYFVHSGDELMRWV 216 Query: 189 DSLG----EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 SL + ++ + +R L I AIG G VL +W + + L Sbjct: 217 RSLFPSATRRALRDAGELTYDVIGRYVRGVALVGLIDAIGIGAVLLFVFW-DDLSLVMPL 275 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T I A +P GA ++ + L+ ++ A + + + P + G Sbjct: 276 VILTFIGAFLPVIGAFLAGLVSVLVALVVEGLWMAVVVLAGTIAVQQLESHIIAPRIYGR 335 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++LP + G G+ G F+ ++A++AV+ + ++ + ++ + Sbjct: 336 SLELPSAVVLLSISVGSIIGGITGAFLATPVVAVLAVLLRNRPFTVEASAQEQET 390 >gi|257792294|ref|YP_003182900.1| hypothetical protein Elen_2556 [Eggerthella lenta DSM 2243] gi|317490215|ref|ZP_07948703.1| hypothetical protein HMPREF1023_02403 [Eggerthella sp. 1_3_56FAA] gi|257476191|gb|ACV56511.1| protein of unknown function UPF0118 [Eggerthella lenta DSM 2243] gi|316910709|gb|EFV32330.1| hypothetical protein HMPREF1023_02403 [Eggerthella sp. 1_3_56FAA] Length = 429 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 114/339 (33%), Gaps = 14/339 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--S 59 R ++ + ++ +++ L V+ +++I F + Sbjct: 16 RSFLIVWTIVGGILLTGVLVYLFNILSVPIGIVIWSIVIVFCLRGPVNKLEKLGVPRVAG 75 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH----GIPVPRWLSDIPG 115 T +A + V+ L + + + + L+ + Q G + +D+ Sbjct: 76 TTIAYVLMFVVLALVGLLMFSPAFGVGDQFTNLIESIPGYVQTIAGWGNDLYTRYADVLQ 135 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L ++ + TF + + + G ++ +++ F ++ F Sbjct: 136 NDTVQTWINNALD---AIVSWASTFARDSANGVVA-----IGTGLVNTFVALGFALVVAF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + + ++ L + + +V+ G + G+ + Sbjct: 188 WILMELPQLGRECMRLVNPKRHEDLEMLHVTFTRVMGGYIKGTLLQCAIIGVGCVVLFGA 247 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P++ ALG I ++ +IP P A++ + + + + A IV Sbjct: 248 IGIPNYAALGGIAGLLNIIPIVGPWLGGALAAIVGVFVSPWIAVIALGGTIAIQQIVYTF 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + P ++ + + T L+ G G + F G ++ Sbjct: 308 ISPKIMANSVDVHPALTLIALMAGSAIGGAMSGFTGSLV 346 >gi|182625054|ref|ZP_02952831.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|177909674|gb|EDT72100.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 377 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 112/333 (33%), Gaps = 8/333 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIATVSVMC 72 I+ LY G P + + I F +F + + + Sbjct: 31 IMNFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNGKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + +Q + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ L++I I L + + + Sbjct: 151 KEILKVTSQIVGTSLCYLLDFTLGITYGVINFFLALILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILKR 363 >gi|159026346|emb|CAO86435.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 124/344 (36%), Gaps = 38/344 (11%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLS-----ALIIGFTSWPIYSSFISKKEESS 59 LN ++R++++F SL L +F +++ A++ ++P+ Sbjct: 10 TLNNSILVRYLLLFGCGWSLIILINYFYGIIAIFTGSAILAALLNYPV-VWLSRYLP--R 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA--NQHGIPVPRWLSDIPGGM 117 I T+ L + + + + K L+ + A Q +P +L + Sbjct: 67 GLAIAITTIVAFILLFRLVTGIGLEAVSQGKGLLFNLTDALGQQDFLPFKDFLDRLDLNK 126 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L T + + +F + + Sbjct: 127 MVGTLQTGLAT------------------------GLSIVQGVFSSVFTGVFGAVISVYM 162 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L L PAY ++ ++ + G ++ + + ++ L G Sbjct: 163 LIDGDKLWRGFLQL---LPPAYRERFAKSFRQSFLGFIRGQLLLMLFLSVTSFLSFSLLG 219 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + + L I ++ IPG GA + V+I + A F+ + + I D + Sbjct: 220 IQYGLILAGILGVIDAIPGIGATLGILLVTILTFTSQGLTIAVKAFIVCVVLVQIQDNII 279 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 RP ++G ++L + F L G R GLLG+F+ + +IA+ Sbjct: 280 RPKVMGNALELNPVILFLSLFIGERIAGLLGVFLSIPIAGMIAI 323 >gi|85715997|ref|ZP_01046974.1| hypothetical protein NB311A_14310 [Nitrobacter sp. Nb-311A] gi|85697195|gb|EAQ35076.1| hypothetical protein NB311A_14310 [Nitrobacter sp. Nb-311A] Length = 683 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 118/361 (32%), Gaps = 30/361 (8%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ +++ LY + F P++ A+++ F P+ + + V+ Sbjct: 20 DRALTAVVVAALVICGLYVGREIFVPIVLAVLLSFVLAPLVDILERWHFPRAASVPVVVL 79 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + +F L + E++ L + L Q + L + Sbjct: 80 LAFIAIF-----ALGGLIVREVRGLAESLPLYQQTMQQKIQSLRALTMTGPLDRAAELLQ 134 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASR------FGMIFLDYCLSIIFMIIALFF----- 176 + + + + + A L I +I+ Sbjct: 135 NLDKEISGPQNQPSPSAAGSPSSKTADHVEPIPVLVRSPPQSALENISALISPLLHPLAI 194 Query: 177 -----------FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ ++ + G + + I ++ R + + + A G Sbjct: 195 VGIVIVFVIFILFQREDLRNRFIKLAGSNDLQSATAAIDDAAGRLSRLFLMQVLLNA-GF 253 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+++ + L GVPS + G++ AIM +P P + L I + + L+ Sbjct: 254 GVIVAAGLLLIGVPSAILWGILAAIMRFVPYVGPFIAAFFPLTLAIAVDPGWSMLLWSGA 313 Query: 286 AIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I L +V + P LVG L + G +GL + L + V+ + Sbjct: 314 LILLTELVVGQVFDPLLVGHSSGLSPVAVVVSATFWTALWGPIGLVLATPLTICLVVLGR 373 Query: 344 E 344 Sbjct: 374 H 374 >gi|117920098|ref|YP_869290.1| hypothetical protein Shewana3_1651 [Shewanella sp. ANA-3] gi|117612430|gb|ABK47884.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 366 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 101/303 (33%), Gaps = 12/303 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + V + + ++ L + L++ + G+ Sbjct: 54 WPVAQML--KLGINRTTGASLVLVLFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L+ +SE + + L T + I + + L Sbjct: 112 QTLQGLATQYPQFVSSEQLNL-------MVAELKKLLDTQHLLDIAKQLIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVI 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + G+ LGV+T + +IP GA + + + + + + Sbjct: 224 VGVASYIFFAFMGLRYSALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KES 345 Sbjct: 344 NAW 346 >gi|168186309|ref|ZP_02620944.1| permease [Clostridium botulinum C str. Eklund] gi|169295736|gb|EDS77869.1| permease [Clostridium botulinum C str. Eklund] Length = 368 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 105/331 (31%), Gaps = 9/331 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A II + PI + + + VM L + + + Sbjct: 43 LMPFILAFIIAYILNPIMKFIEKRIRLNRGASISCTYILVMSLITIFSIIIIPKVFNSGI 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++++ + Q + IP +S L + I + + + G+ + Sbjct: 103 DMINNIPDFAQKMYSWTS--NHIPSKFMSSG---SILRNNSGKWIEKLSVMSSQGLSVVL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 +++ +I I L+ + ++ + + + + + V + Sbjct: 158 STIVSTTTSLINFIFGLIISIYMLYDKEKFQEISTKLIYIVLKKEKGNKFISFIKTVHTM 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIY 268 + + I + G++ + P + L +I + MIP P I Sbjct: 218 VGTYIGIKAIDSFIIGVICFIGLMIFKTPYVLILSIIVMVTNMIPYFGPFMGMIPPFVIN 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + A + ++ + L P LV + + G+ G++G+ Sbjct: 278 IFY--DPKKALGILIFLILLQQFDAWILEPKLVSNSVGVSPFLVILGITIFGSLFGVIGM 335 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +MA++ + + + E + Sbjct: 336 LLASPIMAVLNIYLGKWFRSKVNQYESSQNQ 366 >gi|116671651|ref|YP_832584.1| hypothetical protein Arth_3105 [Arthrobacter sp. FB24] gi|116611760|gb|ABK04484.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24] Length = 389 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 87/231 (37%), Gaps = 1/231 (0%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + A + ++ M++ LFFF +DG I Sbjct: 135 DGEQIEQARAAIVDFAASSQVRSGAITGLSVITEFLAGASLMVVILFFFLKDGTGIWNFF 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 A ++ +V+ G I+A+ + L +G+A + VP + L +I Sbjct: 195 LRPYTGAREAKLRRSGARTIQVLGDYVRGTAIVALVDTLAIGTALLILNVPLAIPLAIIV 254 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P GA ++ ++ L+ A + + + L+P ++G ++L Sbjct: 255 FIGAFVPIVGATVAGILAALVALVANGPVVALVVVIVVIAVNQLEGNLLQPVVMGKSLQL 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L L G G++G + L A++ I + K+ S+ Sbjct: 315 HALVILLALTAGTILAGIIGAVLSVPLAAVVWAIIQVWTTDEKDQAPAGSA 365 >gi|170783027|ref|YP_001711361.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157597|emb|CAQ02795.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 381 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 115/334 (34%), Gaps = 17/334 (5%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I + +++ L K P L L++ P+ ++ ++ +LA+ +T+ Sbjct: 45 LVIGIAVAAAVWLLVAVKEVVIPFLIGLLVCALLQPLVAALRRRRW--PAWLAITSTLLG 102 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I L+ L + + + A + V L+ P + S+ S Sbjct: 103 TAVVISGLVLLLVAQIRTGIPTLQR--EAMERFESVRDLLAQPPFNVVPSDYDALLASAG 160 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++L+ E L G+ + + DG I + + S Sbjct: 161 KALENSREALL---------TGVLDAGLGVGHLVTGALLAFFTIVIVLIDGRGIWRFVVS 211 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + R + + +A G + +G A WL G+P + + V+ + Sbjct: 212 VFPRRARPAIDGAGRAGWGTLSAFTRVQIFVAAGNAVGIGIAAWLLGLPLAIPIAVLVFL 271 Query: 251 MAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP I A ++ L+ A + + + L+P ++GG + + Sbjct: 272 ASFIPVVGAIVSGAFAVVIALVFVGPLQAAIMLVAVIGVHLLESHVLQPLVMGGAVHVHP 331 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G +A + V+ + Sbjct: 332 LAVVLSVAAGSYVGGVAGALFAVPAVATLNVMVR 365 >gi|319762825|ref|YP_004126762.1| hypothetical protein Alide_2134 [Alicycliphilus denitrificans BC] gi|330824904|ref|YP_004388207.1| putative phytochrome sensor protein [Alicycliphilus denitrificans K601] gi|317117386|gb|ADU99874.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans BC] gi|329310276|gb|AEB84691.1| putative phytochrome sensor protein [Alicycliphilus denitrificans K601] Length = 787 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 19/339 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I +I+ LYF + P++ A ++ F P+ + + + +++ Sbjct: 31 LVIAALIIAGLYFGRTILVPLVLAFLLSFVLAPLVDRLRRLRVPDVAAVLAVVLATLLV- 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQH---GIPVPRWLSDIPGGMWASELWTKHLSHP 130 L E + L +++ + R PG ++ T + Sbjct: 90 ----LGAGATLVANEARALSAELPSYQSTIRGKLRNLRKQMRAPGMFDGAK-RTLDIVQR 144 Query: 131 QSLKILSETFLKTNGIDFI------PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + T + + + A +++ + F D + Sbjct: 145 EVDAATPATPAAVQKVQVLPPPVSPAQQAMAALGSVSGPLADAALVLVFVVFILLDRVDL 204 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L L + ++ R + + + A G+ L + W GVP + Sbjct: 205 RDRLLRLWGRDLHRATDAMDEAGGRITRYLTMQLLVNATY-GIPLAAGLWFIGVPGALLW 263 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVG 302 GV+ A+M +P P+ +A + L + + L+ G I + I + + P+L G Sbjct: 264 GVLAAVMRFVPYVGPLISSAFPVALAFAVDPGWSLVLWTIGLIAVLELISNNVVEPWLYG 323 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 L + G +GL + P+ + L+ V Sbjct: 324 ASTGLSVMSLIVSATFWTALWGPVGLVMSTPLTVCLLVV 362 >gi|239982689|ref|ZP_04705213.1| hypothetical protein SalbJ_24884 [Streptomyces albus J1074] Length = 429 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 22/356 (6%) Query: 8 PQGIMRWMIMFIILVSLYFL--KGF------FAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M+M + LV+ + L F +L A + P S ++ Sbjct: 25 PRWLPRAMVMALALVAAFQLGTWAFHQLTSLLINILIAFFLALAVEPAVSWMAAR-GMRR 83 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + L ++ ++V ++ V W++ + Sbjct: 84 GLATAAVFLGLLVASAGFVTLLGSMLAGQIVDMVEDFP---KYLDSVISWINQTFHTDLS 140 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L H L+ + L ++ +++ F+F Sbjct: 141 RLEVQDSLVHSDWLRRYVQNS---------ATGVLDISAQLLGGLFQLLTLVLFAFYFAA 191 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G GVP Sbjct: 192 DGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLQWLGVP 251 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + + A + + + + L+P Sbjct: 252 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYMLQP 311 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + + F ++ G +G +G I +A + + + E Sbjct: 312 KLTAKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVRRYDVHDE 367 >gi|83590483|ref|YP_430492.1| hypothetical protein Moth_1647 [Moorella thermoacetica ATCC 39073] gi|83573397|gb|ABC19949.1| Protein of unknown function UPF0118 [Moorella thermoacetica ATCC 39073] Length = 345 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 100/273 (36%), Gaps = 2/273 (0%) Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I+ L L + L V N+ +P + +I G + ++ P Sbjct: 64 ILILYLFILALSLPVFFFVLPQLVRELNEFIAQLPSFTVEIEGLVQGFYQRYHQVALPAG 123 Query: 133 LKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ L + + ++ + R A + + L S + + ++ RD I + Sbjct: 124 LRRLVDDSITNVSSALQEGARHAVQALIDLLAGLASFLLAPVLAYYLLRDSEQIGRAASH 183 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + +V+ S G ++++ G + G L G V LGV+ + Sbjct: 184 LLPIQVKEDILGLWAEIDQVLTSFIRGHLLVSLIVGCLTGVGLALTGSEYAVILGVVVGL 243 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP P+ T I L + + A + I L P ++G + L L Sbjct: 244 ADLIPYFGPLIGTVPVIALSLLVSKKAAIMALAVMLVVQQIEGSFLAPRILGTSVGLHPL 303 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L+ G G GL + L A+ ++ K Sbjct: 304 IIIFALLAGGELWGAAGLILAVPLTAIGYILVK 336 >gi|157803500|ref|YP_001492049.1| hypothetical protein A1E_01595 [Rickettsia canadensis str. McKiel] gi|157784763|gb|ABV73264.1| hypothetical protein A1E_01595 [Rickettsia canadensis str. McKiel] Length = 351 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 126/341 (36%), Gaps = 11/341 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ I+ + + I + + P A II + P + SK + S+ F + I Sbjct: 1 MSKTAILWLVFLGIFISGFMLISDAVKPFFIAFIISYLLQPTINFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L + ++ + + ++++ Sbjct: 61 IYLIFLNIFFLSLTILVPI-------IYGQIFTFIHNIPKYKNYFQGEILPPIMVKIYSI 113 Query: 126 HLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +K F+ + + I R+ +I ++ + ++ + I LF+F RD + Sbjct: 114 EPDIAYKIKDSLSNFINSIFTILSSIANNLWRYTIITINIFVLLLLIPIILFYFLRDWNN 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + + SL +I + ++ + G I + A+ + G+ + Sbjct: 174 IIENMKSLLPIKSRNKILEIISEINDLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALL 233 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLV 301 LG++T + +IP G I+F I + ++ + + I + L P ++ Sbjct: 234 LGILTGFLVIIPFIGTFIAFLLTLIIGYVTFSMTAKLLYIMMIYLVGNICESYVLTPKII 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G I L L F + G++G+F + + ++ Sbjct: 294 GDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILL 334 >gi|237736730|ref|ZP_04567211.1| permease [Fusobacterium mortiferum ATCC 9817] gi|229420592|gb|EEO35639.1| permease [Fusobacterium mortiferum ATCC 9817] Length = 362 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 114/330 (34%), Gaps = 10/330 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+ PV+ A I PI + K + ++ V L + + + + Sbjct: 38 GYLVPVIYAFFITIFLEPIVTIIEKKLKIRRILAVLLTIFLVFVLVGIFIGIIAPQVIES 97 Query: 89 MKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K+L K+ + I + + + + + + +L+ GI Sbjct: 98 IKDLYGKLPAMQGRLEIYAGELIEYLKRKGLLLMGDDEIKASITNFIKENMKYLQDFGIS 157 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + +G+ + + F D + ++++ +F K + Sbjct: 158 VLWNIV-WWGIALTKFFIGFFLA----FLILIDKEYFVRFINNIFSIIFEREKAKSIMVF 212 Query: 208 PKVIRSTFL----GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R L G I++ G++ +L+G P + G++ + MIP I Sbjct: 213 LGESREVLLKFVWGRIIVSTAVGIITFLVMFLSGTPYALLSGIMIGVGNMIPYIGSIIAG 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 A+++ L+ F L L I + + P +V + + ++ G Sbjct: 273 AIAVLLVGLAEPFKLIFLGLAILIAQTVDGWVIGPKIVSETVGMGTFWVVVAILIGGSLF 332 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +G+F G ++ +++ + + ++ Sbjct: 333 GPVGMFFGVPAFGILKLVYIKLLNKRGDSN 362 >gi|94266678|ref|ZP_01290353.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93452666|gb|EAT03223.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 362 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 113/355 (31%), Gaps = 12/355 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ ++ +++ + L F AP+L+A+II + + + Sbjct: 15 DPQAVILTLLLLTGALVLVFFGRMLAPLLTAIIIAYLLEGPIAWMEERLGVRRLVGVSCV 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 L +V L +F ++ +L+ ++ G V + E + Sbjct: 75 LALFFLLVLVSALTVFPVLWTQLADLLKEIPHYLARGQQVL---------LNLPERYPVI 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + + + + ++ + +FF +D I Sbjct: 126 TEEQVRELVGTIRNQVGALGQHVLAISLASVVNIITLLVYLVLVPFLVFFLLKDKDLIMN 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + A + + R + + + G + G + ++ + V V L Sbjct: 186 WISLRLPRERGA-AQDLWRDLDAQMGNYVRGKFWEILIVGGITFISFTILRVDYAVLLAT 244 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGP 304 +T + ++P GA + V + + + + L + I + L P L Sbjct: 245 LTGLSVLVPYVGAVVVTIPVLLVGYFQWGVGSELAWLLIAYGIIQTLDGNVLNPLLFAKA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + ++ G G+F L L+ + +E+ + Sbjct: 305 VNLHPVAIIGAILIFGGLWGFWGIFFAIPLATLVNALIITWPRNPDPEEEEAQAQ 359 >gi|20807695|ref|NP_622866.1| permease [Thermoanaerobacter tengcongensis MB4] gi|20516244|gb|AAM24470.1| predicted permease [Thermoanaerobacter tengcongensis MB4] Length = 339 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 124/348 (35%), Gaps = 15/348 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYF-----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + W ++ + + ++ +K +P ++++ + P F SK Sbjct: 1 MKNKVYIIWFLIVLGIFYIFIKNWVSIKSILSPFFVSILMAYLLNPFVRYFTSK------ 54 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 T S++ +F + + + L+ ++ + R L+ + + Sbjct: 55 --GFTLTFSILTVFFIVAAAILIFSYYVFPILIGELASFVKVAPKYLRELNSVLNHFKFN 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + +++ F S G L + I+ + I F+F +D Sbjct: 113 YLSNLPPNIESAVEKNLNVLTAGVASSIDTFFKSAVG--MLKGFVDIVIIPILTFYFLKD 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 Q++ L + + V +++ ++I G G L V Sbjct: 171 KDIFLTQVECLIPLKYREKIFSLLFKVDRILSKYLRAQAYLSIFVGAFTGLGLALVKVRY 230 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGVI I+ +IP PI ++ + + +IF F + + + + P + Sbjct: 231 AFLLGVIAGILNIIPYIGPILSILPAVAIGLMDSIFKGLWAFAICLLIQQVENVFVTPKV 290 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +G + L + F L+ G G+ GL + A++ ++ E + Sbjct: 291 MGDSVGLHPVTVIFVLILGEELFGVWGLLFSVPVAAILKEVFTEIFLD 338 >gi|225028666|ref|ZP_03717858.1| hypothetical protein EUBHAL_02945 [Eubacterium hallii DSM 3353] gi|224953976|gb|EEG35185.1| hypothetical protein EUBHAL_02945 [Eubacterium hallii DSM 3353] Length = 399 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 125/363 (34%), Gaps = 17/363 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKE--------ES 58 GI+ ++F + V + LKG P L ++ + P+ + K ++ Sbjct: 23 GILCAFVLFKMPVIISVLKGITEILKPFLYGVVFAYLLAPLCNKIEEKLFQIFPKAKTKA 82 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGM 117 F+ IA V +C+ I + + + ++ + V K++ Q I V W+ + Sbjct: 83 RRFICFIAIVISLCVAIAVIWLIIMMIIPQVWDSVMKIIQMVPQKLIVVNNWIEHMLENQ 142 Query: 118 W-ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + S +S + I S L +I ++ + Sbjct: 143 PELQAYFEEFSSQAESNIDSLLNVDTIQKVQSIINSLSVQLFGVLGVVKNIFLGLLISAY 202 Query: 177 FY----RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 G L + + ++ R K+ +G I + GL+ + Sbjct: 203 LLGSRKLFGAQAGLILHGVFSDKWAKIIEEEIRYTDKMFNGFLVGKIIDSAIIGLLCFAG 262 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G + + VI I +IP P LL+ N + ++ + + Sbjct: 263 TSIMGFEAPAFISVIIGITNIIPFFGPFIGAIPCGLLLLLENPMHCLYFIIFIFVLQQLD 322 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P ++G + F ++ G++G+ IG L A+I I ++ + Sbjct: 323 GNVIGPKILGNTTGVSSFWVLFAILLFGGMWGVVGMVIGVPLFAVIYDIIRKLVYRGLRK 382 Query: 353 KEK 355 ++ Sbjct: 383 HKR 385 >gi|295399259|ref|ZP_06809241.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] gi|294978725|gb|EFG54321.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] Length = 341 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 104/326 (31%), Gaps = 4/326 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 FL + P++ AL P + + + FL Sbjct: 15 LFLLPYSLPLVFALATALLLEPAVQHLQTHYRLKRVHAVTAVFSLFLIIVGFAFYFLIVI 74 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ K+ V ++S + + +S ++ + L Sbjct: 75 LVQQIMTFSQKLPHFLSEATAVFNKFIQT-WESYSSSIPKEIISSLENSVETIQRLLLEF 133 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F + + + ++ALF D + +++ I Sbjct: 134 ATNLTQSIV-HFITSIPGFLIHFLVYLVALFLISLDLPKLKKRIKKYLSERTHQRLAMIV 192 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + K ++++ + L V V + ++ ++ ++P G Sbjct: 193 AQLSKAGIGFIKAQFLLSLITFFLALVGLLLLKVDYAVMMALLIVVVDILPILGTGSVLV 252 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + I + GN L + + + +V + + P + + + L + G + + Sbjct: 253 PLGIISIANGNSGLGAGLIVL-FLIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQLL 311 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAI 349 G +GLFIGP L+ L+ + K ++ Sbjct: 312 GFIGLFIGPALVILLEAMIKAGVIKF 337 >gi|312110140|ref|YP_003988456.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] gi|311215241|gb|ADP73845.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] Length = 341 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 105/326 (32%), Gaps = 4/326 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 FL + P++ AL P + + + FL Sbjct: 15 LFLLPYSLPLVFALATALLLEPAVQHLQTHYRLKRVHAVTAVFSLFLIIVGFAFYFLIVI 74 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ K+ V ++S + + +S ++ + L Sbjct: 75 LVQQIMTFSQKLPHFLSEATAVFNKFIQT-WESYSSSIPKEIISSLENSVETIQRLLLEF 133 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F + + + ++ALF D + +++ I Sbjct: 134 ATNLTQSIV-HFITSIPGFLIHFLVYLVALFLISLDLPKLKKRIKKYLSERTHQRLAMIV 192 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFT 263 + K ++++ + + L V V + ++ ++ ++P G Sbjct: 193 AQLSKAGIGFIKAQFLLSLITFFLALAGLLLLKVDYAVMMALLIVVVDILPILGTGSVLV 252 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + I + GN L + + + +V + + P + + + L + G + + Sbjct: 253 PLGIISIANGNSGLGAGLIVL-FLIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQLL 311 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAI 349 G +GLFIGP L+ L+ + K ++ Sbjct: 312 GFIGLFIGPALVILLEAMIKAGVIKF 337 >gi|167461645|ref|ZP_02326734.1| hypothetical Membrane Spanning Protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 371 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 119/322 (36%), Gaps = 13/322 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+ + +I P ++ F+++K I+T S + L + + L + ++ Sbjct: 37 APLFWSFVIFLMIEP-FARFLNRKGLRKGLATTISTFSFIILILAFVTVLGLFLTNQVAS 95 Query: 92 LVSKVVLANQ--------HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 L+ K+ + + + ++P + + + ++ T Sbjct: 96 LIEKIPGYANIIQHQIAGTTTYIQKKMQNLPPDTL--DKFQEFANNLTETATKFTTAFLK 153 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +DF F F ++ + II FF + S + + + Sbjct: 154 GILDFFKGGLLSFFTSFSGIMVNFVVGIILAFFLSLEIESWKKGARRKISPSLLNTFTFL 213 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 V K + I+ +++ + + V + ++L ++ ++ ++P G F Sbjct: 214 KENVGKGVSGYIKSQLILVSITFVIVLVSLIILRVENALSLSIMAGVIDVLPLLGISAFF 273 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 IYL I N A L + I L +V + + P + G + + F ++ + Sbjct: 274 IPWIIYLFIINNYPLAIALSIVLGITL-LVRQIMEPKITGQALGVSPFTMFAFMIVSLSV 332 Query: 323 MGLLGLFIGPVLMALIAVIWKE 344 G+ G I PVL+ + ++KE Sbjct: 333 FGVFGFIISPVLLITLKALYKE 354 >gi|330469819|ref|YP_004407562.1| hypothetical protein VAB18032_29456 [Verrucosispora maris AB-18-032] gi|328812790|gb|AEB46962.1| hypothetical protein VAB18032_29456 [Verrucosispora maris AB-18-032] Length = 425 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 112/327 (34%), Gaps = 18/327 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 G V+ AL + P + +A + L L Sbjct: 116 AGILVLVVIALFLAVGLHPAVVRLCAWGLPRGLAVAAVT-----------LTVLALLAAG 164 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + + V + Q +P +L + ++L + ++ + + + Sbjct: 165 VLALVPPIVTQSGQFLDQLPSYLDTLRRNEAVNDLVVRFDLMRRAQEAANADVVGRALGG 224 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + FG +F + ++ + ++F + + +L + I + Sbjct: 225 VLGGAQLVFGTVFRVLTVLVLTIYFLVYF-----DRMRELGYALVPRSRRERVQLIGDEI 279 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 + + +G IA+ G+ + G+P AL V+ A+ +IP GA + VS Sbjct: 280 LTKVGAYMVGALSIAVLAGVTTFVFALIVGLPYPFALAVVVAVTDLIPQIGATLGAVIVS 339 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + ++ + I + + P ++ + + + + GV +G++ Sbjct: 340 LVGFAT-DPSVGIACVVFFVVYQQIENYLIYPKIMRRSVHVNEVAALVAALLGVSLLGVI 398 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENK 353 G I +A +I +E ++ ++ + Sbjct: 399 GALIAIPTVAATQLILREVVLPRQDAR 425 >gi|326804323|ref|YP_004322141.1| hypothetical protein HMPREF9243_2032 [Aerococcus urinae ACS-120-V-Col10a] gi|326651024|gb|AEA01207.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a] Length = 404 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 99/303 (32%), Gaps = 1/303 (0%) Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI-PGG 116 V+A ++++ + + L + + + + + Q + D+ P Sbjct: 76 RRPIAIVLALLTILAIIALTLGLIIPQLVAVVTNFMEILPRLFQSLDRLLERYEDLYPEI 135 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + + L ++ I + + ++II L Sbjct: 136 VSYMGNLDLNWQNMVRRTVSFAQGLTSSLIGSTIGAVTSVASWIVTIFIAIIITFYILMS 195 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 R G + + + + + + G + A G ++G W+ Sbjct: 196 KERLGQQFHRLTKAYLKDKRYNQIHYVLAMANDAFYNFIAGEVVEAAILGCMVGFGMWIF 255 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G P +GV+T + A+IP + L++ + A ++ + I + Sbjct: 256 GFPYASMIGVLTGVTAIIPLLGAYISGGLGFLLILMHSPVQALLFVVFIVVVQQIEGNLI 315 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG + LP + + G MG+ G+ IG + + + K + + + Sbjct: 316 YPKVVGNSLGLPGMWVLIAVTVGGGLMGVAGMLIGVPIASAGYRLLKFDVNYREAKAQAP 375 Query: 357 SSN 359 Sbjct: 376 DDQ 378 >gi|315303146|ref|ZP_07873817.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] gi|313628477|gb|EFR96939.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] Length = 360 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 114/358 (31%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R + +I LY L+ +L I + + + + + + ++ Sbjct: 23 LQNKSVKRVGVFLLITFILYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 82 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + ++ + ++ +LV Sbjct: 83 LYVFIAAVIVLVFVKYIPVLGDQVNQLVKFGNSFFTT---------------------DS 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L+ F + + +++ ++ FF + Sbjct: 122 NNDFINYIVRLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKDHLI 181 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + IIA+ ++ A W+ G P + Sbjct: 182 SFTNQFSTSKIGFIYDEVKFFGAKFVGTFGKVIEAQFIIALVNAVLTTIALWILGFPQLM 241 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + + + L P L+ Sbjct: 242 TLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILIVVIVIHALESYVLNPKLM 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ I++ K+ IS Sbjct: 302 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTGQEEIEQPKDTISH 359 >gi|325983248|ref|YP_004295650.1| hypothetical protein NAL212_2698 [Nitrosomonas sp. AL212] gi|325532767|gb|ADZ27488.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 602 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 129/360 (35%), Gaps = 19/360 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ +L + + + ++L LY+ + PV ++++ F PI + + Sbjct: 1 MKKNLLVTNNVSMLIALALVLGFLYWARIIVIPVALSILLTFLLTPIVAWLQQRGVARVV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV-----------SKVVLANQHGIPVPRW 109 +A+ A++++ + ++ + + + +++ ++ GI Sbjct: 61 AVALAASLALSSIVGA--IWGVTSQIGSLLDTYPQYENNILSKLNQITERDRDGILDKLQ 118 Query: 110 L--SDIPGGMWASELWTKHLSHPQS--LKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + I + + +L P KI ++ + F L+ Sbjct: 119 VVTERITEKLTNNPAIEDNLPIPADKKEKIEAQPVRIVDDGPFQLSQLWSVFGPMLEPLA 178 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + +I+ + F + + ++ SL A+ + + + L +I +G Sbjct: 179 NAGLIIVLVCFMLLNREDLRDRVISLIGVEQLAHTTRAFEDAGERVSRYLLMQLLINLGY 238 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + WL GVP G A++ IP G + +++ LL+ + A + Sbjct: 239 GIAVALGLWLLGVPYAALWGFFGALLRYIPYLGAWLTAILPITLSLLLSPDWSLAIMVLA 298 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + I + + P L G I + + G +GL + L I V+ + Sbjct: 299 MFCVLELITNMIIEPMLYGRGIGVSQAALLVCVAFWTWLWGPIGLILASPLTVCIVVLGR 358 >gi|187932049|ref|YP_001892034.1| PerM family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712958|gb|ACD31255.1| PerM family protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 368 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + V+ Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 73 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDQI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 133 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADINL 367 >gi|332141566|ref|YP_004427304.1| putative permease [Alteromonas macleodii str. 'Deep ecotype'] gi|327551588|gb|AEA98306.1| putative permease [Alteromonas macleodii str. 'Deep ecotype'] Length = 357 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 101/318 (31%), Gaps = 14/318 (4%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 PVL A +I + WP+ + T I V + + I+ L+ L + Sbjct: 39 IMPVLVAAVIAYLLDWPVCR--LVNVGLGRTIACGIVMVGFITITILTLVGLVPIISKQS 96 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + L Q W+ +P ++ + + +T Sbjct: 97 VNLIQETPLIWQK---AQEWILTLPDKYPDYVQVSQIHQMMEGINEKLVEVGETLISASF 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A + +I + + +FF +D + L ++ + Sbjct: 154 SNIA-----NLAALLVYVILVPLMVFFMLKDKLFFLDGISRLLPKERRL-ITQVGHEMNS 207 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I + G I I G+V + L + + LGV+ +IP GA + V++ Sbjct: 208 QIANYIRGKVIEIIIVGVVSCVTFVLMDLRYAILLGVLVGFSVLIPYIGAAVVTIPVAVV 267 Query: 269 LLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + I L + I + L P L + L L ++ G G Sbjct: 268 AMFQWGISPEFWYLMIAYGIIQALDGNLLVPLLFSEAVSLHPLYIIVAVLVFGGLWGFWG 327 Query: 328 LFIGPVLMALIAVIWKES 345 +F L L+ + Sbjct: 328 VFFAIPLATLVKAVVTAW 345 >gi|296331537|ref|ZP_06874007.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675700|ref|YP_003867372.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151304|gb|EFG92183.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413944|gb|ADM39063.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 388 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F + +SI+ + LF+ +DG + + + + Sbjct: 170 TGVGNFIGALTEIIISIVTVPFILFYLLKDGKKLPVYILKFVPTRLKEQTYTVLSEMNHR 229 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G I++ G +L Y + G+ L VI A +++P P +I + Sbjct: 230 LSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIA 289 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + L + I I K + P ++G + + + F L+ + G++G+ + Sbjct: 290 IVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIIL 349 Query: 331 GPVLMALIAVIWKESIMAIK 350 A+ VI K Sbjct: 350 AIPGYAVAKVITTHLFDWFK 369 >gi|164688740|ref|ZP_02212768.1| hypothetical protein CLOBAR_02387 [Clostridium bartlettii DSM 16795] gi|164602216|gb|EDQ95681.1| hypothetical protein CLOBAR_02387 [Clostridium bartlettii DSM 16795] Length = 363 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 118/332 (35%), Gaps = 13/332 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L A II P+ K + ++++ ++ + ++ + Sbjct: 35 VLGSILTPFLIAFIIAAILNPLIKFSCKKLHINRAIISILFVLTFYTVASFIIILIGSKL 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ ++ L + L ++ D +L+ + S S + L + Sbjct: 95 LVLLQSLFT--TLPQFFTTYFEPYIRDT--FTHFEKLFLSLDPNVISALEESSSSLISTL 150 Query: 146 IDFIPRFASRFGMIFLDYCLSI-------IFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +F+ +F++ + +I + II FF D I + Sbjct: 151 GNFVSKFSTMVVSYVSGFATTIPAIFLKTVITIIVTFFITIDFEKIINFIKRQLPESASK 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 K+ + + + L +I + + +P+ + + V+ AI ++P G Sbjct: 211 PIKESKKFITTTLFKCLLSYVLILSITFTEIAIGLTILQIPNAILIAVVIAIFDILPVLG 270 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 +I L+ GN + + I I + P LVG + L + T + Sbjct: 271 TGGIMIPWAIIALLYGNYTIGIGVAILYIIITIIR-NIIEPKLVGQQVGLHPVVTLISMF 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+ +G +G+ P+ +AL+ + + I+ I Sbjct: 330 VGLHFLGFIGMLGLPITIALLRYLNDKGIVKI 361 >gi|260584716|ref|ZP_05852462.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] gi|260157739|gb|EEW92809.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] Length = 362 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 112/332 (33%), Gaps = 7/332 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + ++ +I F + + ++++ +F+ +L + + Sbjct: 34 LFDVISTLIYGAVIAFVLNVPMKKIEQYLVKLKVKAELRRPIAMVLVFLALILIVIALLV 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L + L + V L + G LS S + + I Sbjct: 94 LVLPTLAQTISQLGTVLSTVLTQLGKLLGSSEFVT--KDMLSTIVSGIQGQSSSISQALI 151 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY----WKK 202 F+ S G ++ +I+ F F ++ L + P Sbjct: 152 GFLSGLTSNIG-NIFSSLMNAFLIIVFTFLFLSSKEHLAAMTSRLLKVFLPEKVVIKLTY 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I ++ + + I A+ G+++ Y + G+P V G+ +++ IP P+ Sbjct: 211 IGQVALETYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGVMTGIFAGVLSFIPYVGPMIA 270 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + + A L + I + P +VG I LP L T G Sbjct: 271 CVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQSIGLPALFTLAAASIGGNL 330 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GLLG+ + A+I + KE ++A + + Sbjct: 331 FGLLGMIFFTPVFAVIYRLVKEFVVAKENQVD 362 >gi|218462338|ref|ZP_03502429.1| putative transmembrane protein [Rhizobium etli Kim 5] Length = 508 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 2/173 (1%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 L S+ +I+ + F + + + L + + + + L Sbjct: 100 LLGPIASLGLIIVVVIFMLLEREELRDRFIRLVGYGDLHRTTEAIQEAGSRVARYLLMQL 159 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 ++ G+ L W G+P+ G++ ++ +P P+ T + ++L + + Sbjct: 160 VVNCAYGVPLALGLWTVGIPNPALWGMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSL 219 Query: 280 CLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L++ + + + P+L G L L + G +GL + Sbjct: 220 VLWVAAIFVVLELTSNNVIEPWLYGSRTGLSPLAIIVAAIFWAWLWGPVGLVL 272 >gi|89894517|ref|YP_518004.1| hypothetical protein DSY1771 [Desulfitobacterium hafniense Y51] gi|89333965|dbj|BAE83560.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 357 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 126/352 (35%), Gaps = 3/352 (0%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+E + +I FI++ + Y+ FAP + AL+ P + + + Sbjct: 4 MKEFAKKVAVTLLVIIAFILIPLVAYYALPHFAPFIFALVFALLLEPFNQWLMKWPKINR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A I+ + F++ FL E EL+ + + + + Sbjct: 64 PVAANISYFVFLGGFLLLAYFLITKITSEAYELIKFIQRNIPNIQFWFNDANQRINELIM 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 Q++ + N + + ++++ IAL+ Sbjct: 124 VLPPEMVAQINQTITGFANQLSSINLLSTWGAQTISITASIPIFFITLLIFFIALYMINL 183 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + ISQ+ S + + + +++ +V + + Sbjct: 184 NLHHISQRFFSYFKKESKPKAIAVLSDLRNATIGFLKAQVVLSTFTYIVSLGGLLILDMR 243 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ I+ ++P G I L+ G+IF+ L L I + ++ K + P Sbjct: 244 YALVLALLIVIVDILPILGTGSVLVPWGIVLITLGDIFSGLGLILL-FIVITVLRKIIEP 302 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++G I L L T + G + MG+LG+F+ P+L+ + K ++ + Sbjct: 303 KILGERIGLGPLSTLISIWVGFKVMGVLGVFLAPLLIIFYKALVKAKVIQYR 354 >gi|256396649|ref|YP_003118213.1| hypothetical protein Caci_7547 [Catenulispora acidiphila DSM 44928] gi|256362875|gb|ACU76372.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 392 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 99/301 (32%), Gaps = 16/301 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + ++ A+ P+ + +++ + + V+ LF + +F E+ Sbjct: 84 LSVLMLAVFFATALDPMVTGLVNR-GLRRGLAVFVVAMGVLALFAGFVAVIFPPIDREVN 142 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI- 149 L++ + P +L+D+ + L + L ++++ +N + Sbjct: 143 SLINAI----------PGYLNDL----RNKSTYLGKLENKYHLIEKVKSWINSNKAGTLD 188 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G + I F+F + I L +++ + Sbjct: 189 LNGILGAGKAVFSLLTGTLAGIALTFYFVANMPGIKNFAYHLVPVRRRPRVSELTDRILA 248 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + +G IIA G +P ALG++ A+ ++P AV + Sbjct: 249 QVGKYVIGQMIIASIAGFFTWIWAMAWSIPYPAALGLVVALFGLVPVVGSSIGGAVVTLV 308 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + ++ A + D + P + + + + T ++ G G++G Sbjct: 309 ALTVSLKVAIFTLAYYVAARLAEDYLIAPRVNRRTVDVHPMVTILAVLVGAALFGIVGAL 368 Query: 330 I 330 + Sbjct: 369 V 369 >gi|254822894|ref|ZP_05227895.1| hypothetical protein MintA_23394 [Mycobacterium intracellulare ATCC 13950] Length = 380 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 104/310 (33%), Gaps = 13/310 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ ++ + + + L F+ + + L +V + + RWL Sbjct: 64 WLDRRGLPRGGAVALVLLGGFAILGGILAFVILQFIDGLPGLTEQVTQSIESTR---RWL 120 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P + + ++ + + ++L + A + + + + Sbjct: 121 INGPAHLRSEQIDSAGNAAIEALHNNQAK---------LTSGALSTAATVTELVTAAVLV 171 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L FF G +I + + + + + ++A+ + +G Sbjct: 172 LFTLIFFLYGGRNIWRYVVQIIPAHVRDRVHEAGNAGYGSLIGYVRATFLVALTDAAGVG 231 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+P + L + + A IP GA IS + L+ I A Sbjct: 232 TGLAIMGIPLALPLASLVFLGAFIPLIGALISGLLAVVVALLAKGIVYALITLGVLIAVN 291 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+P ++G + + L + G G++G + +A + ++ + Sbjct: 292 QMEAHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPN 351 Query: 350 KENKEKISSN 359 E + + + Sbjct: 352 PEAEAEKQTE 361 >gi|163749189|ref|ZP_02156439.1| hypothetical protein KT99_20149 [Shewanella benthica KT99] gi|161331259|gb|EDQ02148.1| hypothetical protein KT99_20149 [Shewanella benthica KT99] Length = 265 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 64/205 (31%), Gaps = 7/205 (3%) Query: 9 QGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R ++F+++V Y ++ F PVL II + + A Sbjct: 24 ESAIRIGLLFMLIVWTYDIIRPFVIPVLWGAIIAVALMSLTHKLEKAFKGRRGLAATALA 83 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKH 126 V + L ++P + + + + + + + ++DIP G E+W Sbjct: 84 VIGVALLVIPFVLVSGSIFDGVSRTIEVLQSGDVQISGPTQRVADIPVIGDKLYEIWALF 143 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + +KT S + I + F IS Sbjct: 144 STNLEKAVQHFLPEIKTAVGTIAAVIGSSLAT-----LMMFIISLAIAAGFMSHAEKISD 198 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVI 211 + + + ++ + I Sbjct: 199 AVSIIAVRVAGQNGEQWITLTAATI 223 Score = 41.4 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + AT +W + + D L+P L+G + +P G +GG+ T Sbjct: 218 LTAATIFTIW-VLIAGVSDNFLKPLLMGRGVDVPMPVILIGAIGGMLT 264 >gi|241895354|ref|ZP_04782650.1| permease [Weissella paramesenteroides ATCC 33313] gi|241871328|gb|EER75079.1| permease [Weissella paramesenteroides ATCC 33313] Length = 384 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 105/321 (32%), Gaps = 15/321 (4%) Query: 30 FFAPVLSALIIG----FTSWPIYSSFISKKEE-----SSTFLAVIATVSVMCLFIVPLLF 80 F V LII + P+ + S + I + ++ + + +L Sbjct: 40 FIGAVFVPLIISGFLYYILNPVVVALQKIPLGKVKHVSRGWAITIVMLLLLGILVALVLT 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + ++ L+ + + LS I + L+ + Sbjct: 100 LLPALVDQISGLIKNIPVLVDTIQHWGNQLSKINFSKEYG-----IDFNLDKLQQEVQNI 154 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 KT ++ + + ++ I + + + DG ++ + + + Sbjct: 155 GKTVVSGMATSLSAVIAKLT-GFTVTAITVPVMTIYMLNDGHKLAPFVQKVFPERQRSRI 213 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I + K + G + I G+ Y++ G + LGV I MIP P Sbjct: 214 SDILGRLNKTLAQYISGQVVEMIFVGVFTAVGYFVIGQKYALLLGVFAGITNMIPYVGPY 273 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++++ I +I+ + I I + P ++G + + L L+ Sbjct: 274 IGLVPALFVAITDSIWQVVWVIAVVLIVQQIDSNLIYPRVMGASLHIHPLTIIVLLLAAG 333 Query: 321 RTMGLLGLFIGPVLMALIAVI 341 G+ G+ + A+I I Sbjct: 334 NIAGIAGMILAVPFYAVIRTI 354 >gi|197301411|ref|ZP_03166492.1| hypothetical protein RUMLAC_00143 [Ruminococcus lactaris ATCC 29176] gi|197299568|gb|EDY34087.1| hypothetical protein RUMLAC_00143 [Ruminococcus lactaris ATCC 29176] Length = 459 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 62/182 (34%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 L++ + +I I LF + + + ++ + ++ +G Sbjct: 223 ILNFIIGMIVSIYVLFSKEKFMCQAKKLVYAIFRPTKANLILHVGSKSNEIFGGFIIGKI 282 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 I + G++ + +P + + VI + +IP P S L+ + Sbjct: 283 IDSAIIGVLCFIGLSILNIPYTLLVSVIVGVTNVIPFFGPYIGAIPSALLIFLADPVKGV 342 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + L P ++G L F ++ G+ G+ +G A+I Sbjct: 343 YFVIFIILLQQFDGNILGPKILGNSTGLSAFWVVFSILIAGGLFGIPGMLLGVPTFAVIY 402 Query: 340 VI 341 I Sbjct: 403 YI 404 >gi|322384232|ref|ZP_08057942.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151124|gb|EFX44441.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 374 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 119/322 (36%), Gaps = 13/322 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+ + +I P ++ F+++K I+T S + L + + L + ++ Sbjct: 40 APLFWSFVIFLMIEP-FARFLNRKGLRKGLATTISTFSFIILILAFVTVLGLFLTNQVAS 98 Query: 92 LVSKVVLANQ--------HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 L+ K+ + + + ++P + + + ++ T Sbjct: 99 LIEKIPGYANIIQHQIAGTTTYIQKKMQNLPPDTL--DKFQEFANNLTETATKFTTAFLK 156 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +DF F F ++ + II FF + S + + + Sbjct: 157 GILDFFKGGLLSFFTSFSGIMVNFVVGIILAFFLSLEIESWKKGARRKISPSLLNTFTFL 216 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 V K + I+ +++ + + V + ++L ++ ++ ++P G F Sbjct: 217 KENVGKGVSGYIKSQLILVSITFVIVLVSLIILRVENALSLSIMAGVIDVLPLLGISAFF 276 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 IYL I N A L + I L +V + + P + G + + F ++ + Sbjct: 277 IPWIIYLFIINNYPLAIALSIVLGITL-LVRQIMEPKITGQALGVSPFTMFAFMIVSLSV 335 Query: 323 MGLLGLFIGPVLMALIAVIWKE 344 G+ G I PVL+ + ++KE Sbjct: 336 FGVFGFIISPVLLITLKALYKE 357 >gi|254373997|ref|ZP_04989479.1| hypothetical protein FTDG_00154 [Francisella novicida GA99-3548] gi|151571717|gb|EDN37371.1| hypothetical protein FTDG_00154 [Francisella novicida GA99-3548] gi|328676638|gb|AEB27508.1| Putative permease PerM (YfgO) [Francisella cf. novicida Fx1] Length = 368 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + V+ Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 73 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 133 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADINL 367 >gi|50843048|ref|YP_056275.1| hypothetical protein PPA1574 [Propionibacterium acnes KPA171202] gi|289426485|ref|ZP_06428228.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289428705|ref|ZP_06430388.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|295131123|ref|YP_003581786.1| hypothetical protein HMPREF0675_4641 [Propionibacterium acnes SK137] gi|50840650|gb|AAT83317.1| conserved membrane protein, UPF0118 [Propionibacterium acnes KPA171202] gi|289153213|gb|EFD01931.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289158103|gb|EFD06323.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|291376946|gb|ADE00801.1| conserved hypothetical protein [Propionibacterium acnes SK137] Length = 433 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKK 55 E + G+ + I+ + + + + F AP+ L + T++PI++ + K Sbjct: 78 EVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHK 137 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + ++ + + + +L S IP Sbjct: 138 CPR-WISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSY-----------------IPQ 179 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 180 MEKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMI 239 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 240 FMVMDTPQMHDRLRMAGSRKPDVVLA--LESFASGIRKYWLVTTVFGLIVALFDWAALLI 297 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP G I ++ L K A + + ++ F++ Sbjct: 298 IGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQS 357 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 358 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 393 >gi|56707621|ref|YP_169517.1| PerM family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256861|ref|YP_514223.1| PerM family protein [Francisella tularensis subsp. holarctica LVS] gi|110670092|ref|YP_666649.1| PerM family protein [Francisella tularensis subsp. tularensis FSC198] gi|115315242|ref|YP_763965.1| PerM family protein [Francisella tularensis subsp. holarctica OSU18] gi|118497169|ref|YP_898219.1| PerM family protein [Francisella tularensis subsp. novicida U112] gi|134302443|ref|YP_001122413.1| PerM family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156503035|ref|YP_001429100.1| PerM family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009246|ref|ZP_02274177.1| PerM family protein [Francisella tularensis subsp. holarctica FSC200] gi|194323467|ref|ZP_03057244.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|208778962|ref|ZP_03246308.1| conserved hypothetical membrane protein [Francisella novicida FTG] gi|224456691|ref|ZP_03665164.1| PerM family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254368137|ref|ZP_04984157.1| permease perM [Francisella tularensis subsp. holarctica 257] gi|254370138|ref|ZP_04986144.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874441|ref|ZP_05247151.1| perM family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|290954339|ref|ZP_06558960.1| PerM family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312226|ref|ZP_06803025.1| PerM family protein [Francisella tularensis subsp. holarctica URFT1] gi|56604113|emb|CAG45112.1| PerM family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89144692|emb|CAJ80023.1| PerM family protein [Francisella tularensis subsp. holarctica LVS] gi|110320425|emb|CAL08495.1| PerM family protein [Francisella tularensis subsp. tularensis FSC198] gi|115130141|gb|ABI83328.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|118423075|gb|ABK89465.1| PerM family protein [Francisella novicida U112] gi|134050220|gb|ABO47291.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134253947|gb|EBA53041.1| permease perM [Francisella tularensis subsp. holarctica 257] gi|151568382|gb|EDN34036.1| hypothetical protein FTBG_01242 [Francisella tularensis subsp. tularensis FSC033] gi|156253638|gb|ABU62144.1| putative membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|194322322|gb|EDX19803.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|208744762|gb|EDZ91060.1| conserved hypothetical membrane protein [Francisella novicida FTG] gi|254840440|gb|EET18876.1| perM family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158778|gb|ADA78169.1| PerM family protein [Francisella tularensis subsp. tularensis NE061598] Length = 368 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + V+ Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 73 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 133 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADINL 367 >gi|302877160|ref|YP_003845793.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|307687859|ref|ZP_07630305.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|302580017|gb|ADL54029.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] Length = 349 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 118/339 (34%), Gaps = 6/339 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ I+ ++++ + P + A + I K + ++ A I T Sbjct: 10 KSLIFFILFTIVFITIFGTIQYTLPFVLAFLFSLLLKRPTKYLIEKGKLKTSLAAFITTT 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGG-MWASELWTKH 126 + I +L Y + E+K L V R W +D+ Sbjct: 70 IFCIVVIGLILLSINYLISELKSLTYNVTDIVTVNFDYIRKWFNDLVDSYNNLDPTLLDA 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + + + + + I+F I + +F +D S Sbjct: 130 INKNLASQSSKLSNYAVSLSSSVVSYLFGIISSLPTLLTLILFTIFSTYFITKDIVS-KD 188 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 K+ ++ L + + L GV L + Sbjct: 189 LTSKYKNMPNRNLITKLLENSKNMLGKYLLAYIFLLFMTFCENLIGFSLLGVDYAFLLSL 248 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ ++P G I + + + L++GN L + ++ + L P L+ + Sbjct: 249 LCGVLDLLPIVGMIIVYIPLILTYLLQGNWIMVIALLFLYTFVM-LIRQVLEPKLLSSTL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+ + + + G++ G LG+F +L+ + I++E Sbjct: 308 KIHPVASLAAIFIGLKAYGFLGMFYCIMLL-VFYNIFRE 345 >gi|255655063|ref|ZP_05400472.1| hypothetical protein CdifQCD-2_05080 [Clostridium difficile QCD-23m63] gi|296451050|ref|ZP_06892792.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296880597|ref|ZP_06904559.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] gi|296260057|gb|EFH06910.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296428551|gb|EFH14436.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] Length = 350 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I ++ + +Y + AP II PI +K + ++ + + + Sbjct: 19 FCIYTLLFIFIYKAFPYIAPFFLGGIIALMINPISQKLENKFHINKGISTLVLSFLAVAI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + E+ ++ + + + + S + Q + Sbjct: 79 VSTVTTIIVINSVKELMGFLNNISANPEDISNTIMYFLNKINDFMKSFQEIANFDIEQLV 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S ++ + + II + IA +F +D I ++ Sbjct: 139 NKFSGEVMQIT--KNLLTSILGLATSIPYIIIFIITLFIATYFIAKDLDKIENSFYNMFT 196 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + + TI+ + ++ L G+ + +G + A+M + Sbjct: 197 VDVRKKVKNVKKEAGLSLVGYIRAYTILMAITFFAIWGSFALFGLKYGLIVGFVGALMDL 256 Query: 254 IPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP I + V +Y + N F A + + L ++ + L P LV + L L T Sbjct: 257 IPFLGIITIYLPVIVYYFLIKNYFIAISMTVI-FFVLSLIREILEPKLVSVNVGLNPLAT 315 Query: 313 FFGLVGGVRTMGLLGLFI 330 + G++ G++G+ Sbjct: 316 LAAIFIGIQVKGIIGVIF 333 >gi|302520594|ref|ZP_07272936.1| integral membrane protein [Streptomyces sp. SPB78] gi|302429489|gb|EFL01305.1| integral membrane protein [Streptomyces sp. SPB78] Length = 367 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 116/338 (34%), Gaps = 21/338 (6%) Query: 11 IMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ ++ + V ++ LK P+L A++ P+YS + + + A I Sbjct: 27 VLLLLVTGVAAVGIWLCVELKTAVTPILLAVLGTALLRPLYSLLVHRAHVQRSLAAGITC 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V+ + + ++++ + + W T Sbjct: 87 AAVVAAVGGAGYIVTSAIVDNGQQILDSIRSGIED------------AASWVGAEDTSLD 134 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L F T I + + + + + ++ +FFF RD + Sbjct: 135 DITHNARQLLNKFGGTAATGVINGLS-----VVGSFVATAVLALLLMFFFLRDAGRALRG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + ++R + + G TIIA+ + + + GVP + LG + Sbjct: 190 LRELSPGDSSDLVEAMARRAYQAVAGFMHGTTIIALIDATFITIGLLVLGVPGALGLGAL 249 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP GA +S + L A + + L+P + ++ Sbjct: 250 VFLGAYIPYLGAFLSGAVAILVALADRGFVIALWVLGVVLAVQVLEGHLLQPVVQSRTVQ 309 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G G+LG+ + L A I++E Sbjct: 310 MHPAVVMVTITAGASLAGILGMLLAVPLTAAAFGIFRE 347 >gi|297191665|ref|ZP_06909063.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721600|gb|EDY65508.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 390 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 103/311 (33%), Gaps = 14/311 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A + P ++ + +V+ + ++ L ++ E+V Sbjct: 39 AFFLALAIEPAVGRMAAR-GMRRGLATFLVFFAVLIAGVGFVVLLGSMLAGQIVEMVEDF 97 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q+ V RW++ + +EL + +++ + + A+ Sbjct: 98 P---QYLDSVIRWINT----TFHTELSRVEVQDSLLRSDWLRKYVQNSATGVLDVSATVL 150 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G +F ++ + + F+F DG + + L S+ + I Sbjct: 151 GGLF-----KLLTIFLFSFYFAADGPRLRRALCSVLPPAKQTEVLRAWEIAVDKTGGYLY 205 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 ++A+ G+ + VP AL V +++ IP A+ + + + Sbjct: 206 SRGLMALISGVAHYILLEILEVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDP 265 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + I + L+P L + + F +V G +G +G I + Sbjct: 266 WYALWVLGFVVIYQQFENYVLQPKLTARTVDIHPAVAFGSVVAGTALLGAVGALIAIPAV 325 Query: 336 ALIAVIWKESI 346 A + + Sbjct: 326 ATLQAFLGAYV 336 >gi|182435547|ref|YP_001823266.1| hypothetical protein SGR_1754 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776182|ref|ZP_08235447.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|178464063|dbj|BAG18583.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656515|gb|EGE41361.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 371 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 99/330 (30%), Gaps = 14/330 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G VL A + P ++ + ++V + ++ L Sbjct: 29 LIGLLTNVLIAFFLALAIEPAVGRMAAR-GMRRGLATFLVFLAVTIFGLGFVVLLGSMLA 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ++V + I W++ + L H L+ + Sbjct: 88 GQIVDMVDEFPKYIDSVI---NWVNQTFRTELSRVEVQDSLLHSDWLQKYVQNS------ 138 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 L ++ + + F+F DG + + L S+ + I Sbjct: 139 ---ATGVLDVSTTVLGGLFRLLTIFLFSFYFAADGPRLRRALCSVLPPARQTEVLRAWEI 195 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAV 265 ++A+ G+ + GVP AL V +++ IP A+ Sbjct: 196 AVDKTGGYIYSRGLMALISGVAHYVLLVILGVPYAPALAVWVGLVSQFIPTIGTYLAGAL 255 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A + + I + L+P L + + F ++ G +G Sbjct: 256 PMLIAFTVDPWYALYVLGFVVIYQQFENYVLQPKLTAKTVDIHPAVAFGSVIAGTALLGA 315 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G + +A + + + Sbjct: 316 VGALVAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|291546175|emb|CBL19283.1| Predicted permease [Ruminococcus sp. SR1/5] Length = 326 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 83/263 (31%), Gaps = 10/263 (3%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V WL+ + W +L +S + +L + + FLD + Sbjct: 14 VENWLNSVVEKGW--KLNPDMISQINQYSSRLQEYLTNTILPQMQFMMKNISASFLDLLV 71 Query: 166 ---SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS----RIVPKVIRSTFLGM 218 + + I + D + + P W R K G Sbjct: 72 FLKNFLIGAIVSLYILADKEGFVAKAKMAVYAVLPTKWATFLVHSMRFTHKTFGGFISGK 131 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 + + G++ + G P + + VI + +IP P L++ + + Sbjct: 132 ILDSAIIGVLCYVGTSIIGTPYAILVSVIVGVTNVIPFFGPYLGAVPCFLLILLVDPIQS 191 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMAL 337 ++ I L P ++G L ++ G G+ G+ +G PV L Sbjct: 192 LYFLIFILILQQFDGNILGPKILGESTGLSSFMVIVAIMVGGGLFGVPGMIVGVPVFAVL 251 Query: 338 IAVIWKESIMAIKENKEKISSNF 360 A +WK ++ E + F Sbjct: 252 NAAVWKLIGRSLDEKDMSADAEF 274 >gi|227530354|ref|ZP_03960403.1| possible permease [Lactobacillus vaginalis ATCC 49540] gi|227349734|gb|EEJ40025.1| possible permease [Lactobacillus vaginalis ATCC 49540] Length = 374 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 128/362 (35%), Gaps = 30/362 (8%) Query: 5 MLNPQGIMRWM---IMFIILVSL--------YFLKGF-------FAPVLSALIIGFTSWP 46 ++N + W+ I+F+ + +L + K F F P+L + + + P Sbjct: 2 IMNREKFYHWLFWPIVFLTIATLIFVCTKIQFIFKPFWTFLSVVFVPLLLSGFLYYMLNP 61 Query: 47 IYSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQ 101 I + + K + +++ V ++ + + + L + E+ +LV+ + + Sbjct: 62 ILNLIVKIKIGKFRINRGIASLLIVVLLILIIVWGISALIPPVVKEISQLVNHLPQTVSG 121 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + P + + H L ++ LK + + Sbjct: 122 LQSLMNDTIKHSPLKHVDLNAYYRQFDH--QLAAYAQKILKG-----LSERVGDIIGMVT 174 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + + I + + LF+ +DG + + ++ + + S G I Sbjct: 175 NITVVTITVPVMLFYMLKDGSKLVPAIQKWLSPHHAKEVNQLLGKMNNTLSSYIAGQVIE 234 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 + G+ Y + P + LG++ + +IP P A ++++ + + Sbjct: 235 CLFVGVFTSIGYLIIHEPLALVLGIVAGLCNIIPYVGPYIGIAPALFVSLTMAPDKLIWV 294 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + + P ++G +K+ L L+ G+ G+ + A++ + Sbjct: 295 IVVVLIVQQVDGNIIYPNIIGKTLKIHPLTIIVLLLAAGHIAGIAGMILCIPFYAVLKTV 354 Query: 342 WK 343 + Sbjct: 355 VE 356 >gi|330889390|gb|EGH22051.1| permease [Pseudomonas syringae pv. mori str. 301020] Length = 289 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 107/279 (38%), Gaps = 6/279 (2%) Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSE 138 + ++ + L ++ + + WL +P L + +SE Sbjct: 1 MMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKAAISE 60 Query: 139 TFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 61 HMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLPRQRE 120 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A++P Sbjct: 121 GQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAIVPYM 180 Query: 258 APISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + V+ G+++ + I + L P LVG I L + F Sbjct: 181 GFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPVAVIF 240 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G G G+ + + A+I V+ + K+++ Sbjct: 241 AILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 279 >gi|332185811|ref|ZP_08387558.1| hypothetical protein SUS17_883 [Sphingomonas sp. S17] gi|332014169|gb|EGI56227.1| hypothetical protein SUS17_883 [Sphingomonas sp. S17] Length = 409 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 113/317 (35%), Gaps = 13/317 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P+ +AL+I PI ++ S+ A++ + + + + L + Sbjct: 70 FFLPLTTALVIAIALVPILEWLERRRVPSA-LAALMCVLLFLIVANIALAAIIVPATDFF 128 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + L S++ + P+ S++ + ++ + S P + ++ ++ Sbjct: 129 RLLPSRIGRIQDNLAPLLDLYSNL--ERYVNKALRQVASTPIRQPQTAAVSPPSSILELA 186 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW-KKISRIVP 208 A + +F ++ +FF + ++ A ++ + V Sbjct: 187 ATSAP-------GLIVQFLFGVLVVFFVLSGWTRMRRETIRGRTSFDGAMATARVIQEVV 239 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVS 266 + + +TII + G + A L G+P + G I A++ IP P+ Sbjct: 240 DDVSAYLGTITIINLALGGAVAGALSLFGMPYPLMWGGIVALLNYIPYFGPVIGALLLAV 299 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L+ +I+ A + + P +VG + + + L G + Sbjct: 300 GGLMTFNDIWVALAPPAIMYGMHLVEANLITPLIVGHRLTISPVLILVSLSFWGWVWGTV 359 Query: 327 GLFIGPVLMALIAVIWK 343 G + L+ ++ + K Sbjct: 360 GALLAVPLLIILQTVLK 376 >gi|148825479|ref|YP_001290232.1| hypothetical protein CGSHiEE_01890 [Haemophilus influenzae PittEE] gi|148715639|gb|ABQ97849.1| hypothetical protein CGSHiEE_01890 [Haemophilus influenzae PittEE] Length = 349 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 117/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L + L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAIFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPENYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + +K + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFK-VWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYSL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|291485556|dbj|BAI86631.1| hypothetical protein BSNT_04582 [Bacillus subtilis subsp. natto BEST195] Length = 388 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F + +SI+ + LF+ +DG + + + + Sbjct: 170 TGVGNFIGALTEIIISIVTVPFILFYLLKDGKKLPVYILKFVPTQLKEQTYTVLSEMNHR 229 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G I++ G +L Y + G+ L VI A +++P P +I + Sbjct: 230 LSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIA 289 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + L + I I K + P ++G + + + F L+ + G++G+ + Sbjct: 290 IVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIIL 349 Query: 331 GPVLMALIAVIWKESIMAIK 350 A+ VI K Sbjct: 350 AIPGYAVAKVITTHLFDWFK 369 >gi|149910488|ref|ZP_01899128.1| permease PerM [Moritella sp. PE36] gi|149806448|gb|EDM66420.1| permease PerM [Moritella sp. PE36] Length = 355 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 115/356 (32%), Gaps = 14/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 +E +P + ++++ +YF P L A+++ + WP+ + + S T Sbjct: 10 QERFSDPHAVTLFLLLVFGFSVIYFAGSLITPFLVAIVLAYLLDWPLIR--LMRLGLSRT 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + VI + + + ++ L L + LV + + G L ++ + Sbjct: 68 WATVIILLLFVTMMVMLTLGLIPTVWHQGVTLVKAMPTMLKQGQEFLLMLPQENPDIFNA 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 EL Q + S + + + A+ + I + + +FF +D Sbjct: 128 ELIKAASLAVQDHVVKSGEMILSASFASLFDIAAI--------LIYSILVPLLVFFMLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L S+ ++ + I + G I G ++ + Sbjct: 180 KTILVKALVSILPQ-NRRLAMEVWTEMNGQIANYIRGKVFEIIIVGFCTWLVFFFTDLQY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V+ +IP GA V + L G T + + I + L P Sbjct: 239 AALLAVLVGFSVLIPYIGAAAVTVPVMVVGLFQWGLTPEFTYMMVAYGIVQALDGNLLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L + ++ G G+F L L+ + E Sbjct: 299 LLFSEAVNLHPVAIIMSVLVFGGLWGFWGVFFAIPLATLVKAVLNAWPKRGDTPAE 354 >gi|328544000|ref|YP_004304109.1| Permease, putative [Polymorphum gilvum SL003B-26A1] gi|326413744|gb|ADZ70807.1| Permease, putative [Polymorphum gilvum SL003B-26A1] Length = 420 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 116/347 (33%), Gaps = 16/347 (4%) Query: 2 RETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + M + I WM+ + +V + P ++ + + + P+ + S Sbjct: 58 DDRMTLRRQIQFWMLSLLAFIVFMLVFSAVLLPFVAGMALAYLLDPVADRLE-RVGMSRL 116 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + LF + LL L ++ + ++ + R L + + Sbjct: 117 WATLTILLVFVLLFALFLLLLVPVLGNQLLGFLDRL-------PGLVRALHTLVTETFGD 169 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L T + L+ + + + G + + + F+ Sbjct: 170 RLSTLAGLDIKDLQSSLGDIMSKAASWLGGLMQSVWSGGQALVSILSLFVVTPVVAFYLL 229 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + ++D ++++R + + G + + GL L G+ Sbjct: 230 LDWDRMVARIDGWLPRPHVETIRRLAREMDAAVAGFVRGQVSVCVLLGLFYAIGLMLVGL 289 Query: 239 PSHVALGVITAIMAMIPGGAPI----SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +G+ +++ IP I AV++ + + A+ F+ Sbjct: 290 NFGLLIGIGAGLVSFIPFVGAILGFVVSMAVALVQFWP-DWPLIAAVAAVFAVGQFLEGN 348 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+P LVG + L + F L G +G+ + A++ V+ Sbjct: 349 ILQPKLVGDSVGLHPVWLMFALFAFGSLFGFVGMLVAVPAAAMVGVL 395 >gi|83594849|ref|YP_428601.1| hypothetical protein Rru_A3520 [Rhodospirillum rubrum ATCC 11170] gi|83577763|gb|ABC24314.1| Protein of unknown function UPF0118 [Rhodospirillum rubrum ATCC 11170] Length = 434 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 128/333 (38%), Gaps = 14/333 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + ++ + ++LV LYF + P++ AL++ PI + +++ Sbjct: 74 LRQQLTTVRWLLTGLFAMMLLVFLYFGRDVLMPIVLALLLALMLSPI-VRLLRRRKVPEG 132 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV+ T+ F +L + + + + + L + + + Sbjct: 133 VAAVVVTLG----FAAGMLLIGFTISGPVATWLEDAPSIGKRIAHKLSSLRESFDVVLDA 188 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + S + G + + A F + ++I+ + FF Sbjct: 189 SRQVEEAADTSSKDNTDRVVMAQPG--LLVKAADSLASGFTTFGVTIVITL----FFLAS 242 Query: 181 GFSISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++++ + ++ R + + S L + +I G G+ +G A WLAG+P Sbjct: 243 GSMFTEKIVHVMPLFRDKLRVLRVVRDIETEVSSYLLTVAMINAGLGVAVGCALWLAGMP 302 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLR 297 + G + ++ +P G+ I + V++ + ++ A L + + L Sbjct: 303 NAFLWGGMAMVLNFLPYIGSMIGISLVALVSFVTFDSLGQALIPPLSYLAVTSVEGQFLT 362 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P +VG ++L L ++ G++G I Sbjct: 363 PAIVGRRLELNALSVMLAVLFWAWLWGIVGALI 395 >gi|323484731|ref|ZP_08090090.1| hypothetical protein HMPREF9474_01841 [Clostridium symbiosum WAL-14163] gi|323691799|ref|ZP_08106056.1| hypothetical protein HMPREF9475_00918 [Clostridium symbiosum WAL-14673] gi|323401968|gb|EGA94307.1| hypothetical protein HMPREF9474_01841 [Clostridium symbiosum WAL-14163] gi|323504165|gb|EGB19970.1| hypothetical protein HMPREF9475_00918 [Clostridium symbiosum WAL-14673] Length = 373 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 109/336 (32%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-ISKKEESSTFLAVIATVSVMCLF 74 ++ I + + F A I+ + + + + +++ + + L Sbjct: 31 VLVFIGWIIRLVFPFLCGSAIAFILNVPMRFVETRLPEKRVRKHRRVISLTVALLFVILI 90 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + FL + + + ++ + V + +L Sbjct: 91 LGIVFFLVVPQITDTLVSLKDLIPQFFMNVQVMLEKKFGEYPEIVEYINNINLQIDWKDT 150 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 T G + M + I + ++++Q L Sbjct: 151 FEKIAGFVTTGAGTVLSSTLTAAMSIASGIATFGIAFIFAIYILLQKENLARQFKKLFYA 210 Query: 195 LFPAY----WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 FP + +I R+ + G A+ G + L +P + +GV+ A Sbjct: 211 YFPERAVNEFIRICRMAEQTFSKFLAGQCTEAVILGTMFFITLSLLRLPYSLLIGVLIAF 270 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+IP A+ I+L + N A + + I + P +VG + LP + Sbjct: 271 TALIPIFGAFIGCAIGIFLTLVVNPVQAVWFTIVFFVLQQIEGNLIYPHVVGNSVGLPSI 330 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G MG++G+ I L +++ + +E + Sbjct: 331 WVLAAVSIGGSMMGVVGMLIFIPLCSVVYALVREDV 366 >gi|229494105|ref|ZP_04387868.1| hypothetical protein RHOER0001_1153 [Rhodococcus erythropolis SK121] gi|229318467|gb|EEN84325.1| hypothetical protein RHOER0001_1153 [Rhodococcus erythropolis SK121] Length = 385 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 93/300 (31%), Gaps = 16/300 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +G ++ AL + P+ + + + + + + L+ + Sbjct: 76 RGMLILIVVALFLAVGIEPMIVWLERR-HFRRWIAVTVVLLGIAVMLALFLVAAITPLVE 134 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + ++ S H +SD+ E T L S Sbjct: 135 QGRQFASHAPELLTHIRDRYPIVSDLDEKYHLEEHLTTQLDGSGSA-------------- 180 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + + +F D I L L H I + Sbjct: 181 -LATGLLGAGRAVFSAVADAGIVAVLTTYFLIDYPRIRTNLYRLVPHSRRPRAIAIGDQI 239 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + LG +I++ + + + VP + L ++ A++ +IP V Sbjct: 240 LAGVGGYVLGNVLISVITAVCTFAWLLIFDVPYPLILALLVALLDLIPIVGSTIAGVVVA 299 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + ++ A + + D L P ++G + +P L T ++ G +G++G Sbjct: 300 LVSLTVSVPTALATVAFFIALRLLEDYLLVPKIIGKTVAVPALVTVVAVLLGGALLGIVG 359 >gi|302562443|ref|ZP_07314785.1| integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302480061|gb|EFL43154.1| integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 365 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 113/328 (34%), Gaps = 14/328 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ L++ +WP + F+ ++ + A + TV + + + E +L Sbjct: 47 PLIVGLLLTTLTWPP-TRFLRRRGMAPALAASLVTVLFLLVAAGTAALIAVPVTSESGKL 105 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 VV QH L + G + + + + + I Sbjct: 106 ADGVVEGVQH-------LREWAAGPPLNIGEAQIAGAFDTATARIQ-----DSAGAIATT 153 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A ++ + + +FFF +DG L ++ + Sbjct: 154 AVTGVSTVFSGVVTAVLALFLMFFFLKDGPRFLPWLARQLPGRLATDVPAVAARCWDTLG 213 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + ++ + + + +G WL VP + L V+T + A +P GA + + L+ Sbjct: 214 AFVRSQALVGLLDAVFIGLGLWLLNVPLVLPLSVLTFVSAFVPIVGALFAGFVAVLIALV 273 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + NA + + + +P + + L + + G G++G + Sbjct: 274 SNGLMNALLVLAVIVVVQQLEGNVFQPMIQSRGLGLHAVVVLLAVTLGGSVAGIVGSLLA 333 Query: 332 PVLMALIAVIWKESIMAIKENKEKISSN 359 + AL+AV+W + + + ++ Sbjct: 334 VPVAALLAVVWNYLREQLADPPREPRAD 361 >gi|217977145|ref|YP_002361292.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] gi|217502521|gb|ACK49930.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] Length = 382 Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 82/219 (37%), Gaps = 6/219 (2%) Query: 141 LKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + F G + ++ + F+ D + +DSL Sbjct: 139 LVNQAAQWAGTFVKSIWSSGAALISLVSLLVLTPVVAFYMLLDWDKMIATVDSLVPLRHR 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 A ++++R + + G +++ + GL G L G+ + +G+ ++ IP Sbjct: 199 ATVRELAREIDAALAGFLRGQSLVCLFLGLWYGVGLSLIGLNFGLLIGITAGFLSFIPYV 258 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIE--LFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + ++ +++G + G + F+ L P LVGG + L + F Sbjct: 259 GSLTALVLSAVIAIVQGWPEWRLMIMALGVVVSGQFLEGNILSPKLVGGSVGLHPVWLIF 318 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ G GL I A VI + ++ + +K Sbjct: 319 ALLAFGSLFGFTGLIIAVPCAAAFGVILRFAVRRYRSSK 357 >gi|226311109|ref|YP_002771003.1| hypothetical protein BBR47_15220 [Brevibacillus brevis NBRC 100599] gi|226094057|dbj|BAH42499.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 343 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 127/342 (37%), Gaps = 4/342 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + +I+ ++L FL + P L AL+ P+ I + + + A Sbjct: 2 TIRKMIILLLVLAVGLFLLPYSIPFLLALLTAILVEPLVLFLIKRLRTNRMSAVITAFFL 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F + L ++ +++ +L ++ +QH + + + + L + +S Sbjct: 62 FLISFGIVLYWIGTQIVIQGIDLAQRLPAYSQHIFELVESYL-MSWETYYASLPAETVSE 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 QS+ +++ T+ + + I + +S I ++ALF D + Sbjct: 121 IQSVFAGLKSWALTSAST-VAKGILGVAAIIPGFLISTIIYLVALFLISLDLPKLRAGFM 179 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + + I+++ + + V + ++ Sbjct: 180 RMFTVSAREKVEVVISQLNRATLGFLRAQIILSLMTFALSLLGLLILQVKYAAVISLMIV 239 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + ++P G +IY + GN A L + + + +V + + P ++ + + Sbjct: 240 FVDILPILGTGSFLVPWAIYTFLMGNSSLAIGLIVI-FLVITVVRRIIEPKILASNLGIS 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + G + +G GL +GP L+ + + K + K Sbjct: 299 ALAALVSMFLGFQVLGFFGLILGPALVIIYEALRKAGFLNFK 340 >gi|261418248|ref|YP_003251930.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|297529102|ref|YP_003670377.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] gi|319767792|ref|YP_004133293.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] gi|261374705|gb|ACX77448.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|297252354|gb|ADI25800.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] gi|317112658|gb|ADU95150.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] Length = 372 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 12/312 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ + K + + + + + L + + L V Q I Sbjct: 48 PLVDALERKAKMPRWLAVSVTLIMLFAAVAGLVTLLVAEIVSGTQYLARVVPEKFQALIT 107 Query: 106 VPRWL---SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 IP + ++ + Q + + + + F Sbjct: 108 YMETFVADQIIPIYKDLAGMFKSLSATQQDTIMQNIQAVGKKIGTTVGEFVQSILQNIPQ 167 Query: 163 YCL-------SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 IF ++A FF +D + + K + + + + Sbjct: 168 LLAWLPNAATVFIFSLLATFFISKDWRRLVRMAQQWLPTKARTSGKTVFLDLKRALFGFI 227 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 + +++ + V + + +I + ++P G I F IY + G+ Sbjct: 228 KAQATLISITTVIVLIGLLILRVDYAITIALIIGFVDLLPYLGTGIVFVPWIIYTMASGD 287 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 I A L + + L + + P ++ I L L T L G + +G LGL GPV Sbjct: 288 IPFAIGLGVLYVVVLVQ-RQIMEPKVLSSTIGLDPLATLIALFVGFKLLGFLGLIAGPVA 346 Query: 335 MALIAVIWKESI 346 + +I + ++ Sbjct: 347 LVIIRTLHSANV 358 >gi|89070129|ref|ZP_01157458.1| Lipocalin-related protein and Bos/Can/Equ allergen [Oceanicola granulosus HTCC2516] gi|89044246|gb|EAR50392.1| Lipocalin-related protein and Bos/Can/Equ allergen [Oceanicola granulosus HTCC2516] Length = 356 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 121/330 (36%), Gaps = 14/330 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + V L+FL P L + P+ + F + TV + +F Sbjct: 16 ALVFAVVLWFLGDALTPFLLGGAFAYILDPVADRLE-RLGMRRLFAVITITVLAILVF-- 72 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L + +++L + A + I + WL+ +L + + Q L + Sbjct: 73 -VLLVLLVVPTLVRQLTQLIETAPELFIRLRDWLA-----ARFPDLVDEGSTIRQQLASI 126 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ET G + A + F++ + ++ + + F+ D + ++D+L Sbjct: 127 GETIAARGGE--MLSAALSSALSFVNVLVLLVIVPVVTFYLLLDWDRMVARIDTLLPREH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ + + + S G ++ + +G + L G+ V +G ++ IP Sbjct: 185 APTIRRLASEIDETLSSFIRGQGLVMLIQGTFYAVSLMLVGLQFGVVVGAFAGLVTFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I A++I L + G + F+ L P LVG + L + Sbjct: 245 VGAIVGGALAIGLALFQFWGEWHMIALVAAIFFGGQFLEGNILTPLLVGDSVGLHPVWLL 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L G +GL + + A++ V+ + Sbjct: 305 LALAIFGAIFGFVGLLVAVPVAAMLGVLTR 334 >gi|330960589|gb|EGH60849.1| permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 260 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 88/214 (41%), Gaps = 3/214 (1%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + A+ + + + +++ + + F+ RD ++ ++ L K Sbjct: 37 GDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLPRQREGQIVK 96 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ +V+ + G ++ +G G++ + L G+ + +GVI + A++P + Sbjct: 97 LAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAIVPYMGFVIG 156 Query: 263 TA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V+ G+++ + I + L P LVG I L + F ++ G Sbjct: 157 IGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPVAVIFAILAG 216 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+ + + A+I V+ + K+++ Sbjct: 217 GELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 250 >gi|55378747|ref|YP_136597.1| HTR-like protein [Haloarcula marismortui ATCC 43049] gi|55231472|gb|AAV46891.1| HTR-like protein [Haloarcula marismortui ATCC 43049] Length = 394 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 117/348 (33%), Gaps = 32/348 (9%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFL----------AVIATVSVMCLFIVPLL 79 F ++ + + + S PIY S A + F+V + Sbjct: 31 FLPTLVFTVFLYYASRPIYRRLGRLPLPKSFLKRAVPYQKQVHAAATIFFFLLPFVVLVG 90 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS-HPQSLKILSE 138 + + E++ + L + P G A +++ L+ P + L Sbjct: 91 YTLVLVIPELQSFFGEGGLGAAYLSQFQELQGGSPPGPLADLGFSEVLAMGPAEVIDLLR 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + L + M ++ DG + + Sbjct: 151 NATVQSWLGRVSDTLIGSLSLLTSLLLRVFIMFAGTYYLLTDGPRLVGWFLDTFD--GSG 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VPSHVALGVITAI 250 ++ + V + + S G + A+ G++ + L +P +G +T I Sbjct: 209 VLREYAAAVDEELSSILFGNILNALVTGVIGIFVFSLYNLVAPGSVQIPFAPLVGALTGI 268 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--------FIVDKTLRPFLV 301 ++IP G I + V++ L + + T W A+ L I D +RP++ Sbjct: 269 GSLIPVVGMKIVYLPVAVLLAVSAVVTGQTAALAWVALFLVVTLVVVDTIPDFLIRPYVS 328 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G F + G G G+F+GP+L+ L A ++ + I Sbjct: 329 GDLT--HVGLLMFAYILGPIAFGFYGIFLGPMLLVLAAQFFRIIVPYI 374 >gi|114563724|ref|YP_751237.1| hypothetical protein Sfri_2557 [Shewanella frigidimarina NCIMB 400] gi|114335017|gb|ABI72399.1| protein of unknown function UPF0118 [Shewanella frigidimarina NCIMB 400] Length = 404 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 101/315 (32%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + IIL + P + + + P + +L++I + + L + Sbjct: 20 VVIILAGIKTASPIVVPFVLSAFLAVICNPAIVLMTRYRI--PKWLSIILMMGFIVLMGL 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L + E + + K W +++I Sbjct: 78 WLASLVGSSVTEFSKEMPKYREQLIEQFA-----------------WILEKLQDFNIQIS 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L + + ++ +I+ + F + S+ ++ L Sbjct: 121 QQKVLDYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSMPRKF-HLALDAP 179 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 K+I + + V + + ++++ +V+G + GV + VI + IP Sbjct: 180 DKRLKQIDKFLQSVNQYMVIKT-LVSLATAVVVGIGLTIIGVDYALLWAVIAFLFNYIPN 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + I+ A L ++ + P +G + L L F Sbjct: 239 IGSIIAAIPAVLLAFIQMGPGAAGITGLLYVGTNMVMGNMVEPRFMGRGLGLSTLVVFLS 298 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 299 LIFWGWLLGSVGMLL 313 >gi|241664037|ref|YP_002982397.1| hypothetical protein Rpic12D_2453 [Ralstonia pickettii 12D] gi|240866064|gb|ACS63725.1| protein of unknown function UPF0118 [Ralstonia pickettii 12D] Length = 356 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 119/346 (34%), Gaps = 14/346 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + L L L P + A I+ + P + Sbjct: 7 SQETKRTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRVPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V + L I+ L + ML + ++ + + A + +P + EL Sbjct: 62 ----VLGVFLMILVLTVVGVALMLLILAVLQREIPAIREQLPGMLAKLNAFLSPKLDELG 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 L+ L L + D + R + G + + I +F+ D Sbjct: 118 LHVSFDFPGLRALLTEQLAASPDDVVARVLTYLRVSGSAAVQVLGLFFLVPIVMFYLLMD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++++ + ++++ ++ G I+ + + + LAG Sbjct: 178 WNMLMRRVETAVPRRWLPKARELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDV 237 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ T + IP A+ LL GN++ + + I F+ L P Sbjct: 238 ALPVGIFTGLAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LVG I L L L+ + G G+ + + A++ V ++ Sbjct: 298 RLVGERIGLHPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343 >gi|218135136|ref|ZP_03463940.1| hypothetical protein BACPEC_03041 [Bacteroides pectinophilus ATCC 43243] gi|217990521|gb|EEC56532.1| hypothetical protein BACPEC_03041 [Bacteroides pectinophilus ATCC 43243] Length = 387 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 110/354 (31%), Gaps = 24/354 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----------ESSTFLA------ 63 + + FL P + I F + S T A Sbjct: 31 VFAGIEFLWDLIFPFVLGAAIAFLLNLPMRGIEKLLKKFMPLIQGKNNSKTSAAERLLRP 90 Query: 64 --VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T + I ++ + ++ E + + +A WL E Sbjct: 91 VSLLLTFGCVIAVISIVIGVVLPQLVSTMESIGQAFMA--WLPQFQDWLQKTFADNPEIE 148 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S NG I M + + ++ + Sbjct: 149 KYIGDVQIDWVAVFDSVKNFIFNGATNILSHTFSATMGIISGVTTFFIAVVFACYILMQK 208 Query: 182 FSISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + Q+ + + F ++ + ++ S G + A G + + Sbjct: 209 EKLESQVRRIIKVTFSEKTVGKINYVASLTHRIFCSFITGQCLEACILGFMFFICMLIFR 268 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + + V+ A MA+IP V L++ + F A + + I + Sbjct: 269 LPYALLIAVLIAFMALIPIVGAFIGCIVGALLILLIDPFKALFFVIMFLVLQQIEGNLIY 328 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P +VGG + LP + + G MG++G+ + L+++I + + ++ Sbjct: 329 PHVVGGSVGLPSIWVLMAVTIGGSLMGIVGMLVFIPLVSVIYSLIGSWVRQREK 382 >gi|54113873|gb|AAV29570.1| NT02FT1096 [synthetic construct] Length = 368 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + V+ Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 73 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 133 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADINL 367 >gi|309781371|ref|ZP_07676107.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Ralstonia sp. 5_7_47FAA] gi|308919784|gb|EFP65445.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Ralstonia sp. 5_7_47FAA] Length = 356 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 119/346 (34%), Gaps = 14/346 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + L L L P + A I+ + P + Sbjct: 7 SQETKRTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRVPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V + L I+ L + ML + ++ + + A + +P + EL Sbjct: 62 ----VLGVFLMILVLTVVGVALMLLILAVLQREIPAIREQLPGMLAKLNAFLSPKLDELG 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 L+ L L + D + R + G + + I +F+ D Sbjct: 118 LHVSFDFPGLRALLTEQLAASPDDVVARVLTYLRVSGSAAVQVLGLFFLVPIVMFYLLMD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++++ + ++++ ++ G I+ + + + LAG Sbjct: 178 WNMLMRRVETAVPRRWLPKARELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDV 237 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ T + IP A+ LL GN++ + + I F+ L P Sbjct: 238 ALPVGIFTGLAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LVG I L L L+ + G G+ + + A++ V ++ Sbjct: 298 RLVGERIGLHPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343 >gi|134103784|ref|YP_001109445.1| hypothetical protein SACE_7364 [Saccharopolyspora erythraea NRRL 2338] gi|291005758|ref|ZP_06563731.1| hypothetical protein SeryN2_14654 [Saccharopolyspora erythraea NRRL 2338] gi|133916407|emb|CAM06520.1| protein of unknown function UPF0118 [Saccharopolyspora erythraea NRRL 2338] Length = 392 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 84/237 (35%), Gaps = 6/237 (2%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 WLS P + + T ++ + ++ L + A FG ++ + Sbjct: 124 DWLSTGPLHLN-DQQITTYVEQAEEWLKNNQATLTQGVTSGVLTTAGTFG----NFLTGL 178 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + L FF DG + + + + + ++A+ + L Sbjct: 179 LLALFTLIFFLYDGRRVWLFVIRIVPAENRDRIDRAGSRGFASLVGYVRATALVAVVDAL 238 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGA 286 + GVP V L + + +P ++ AV++ + L+ A + Sbjct: 239 GIWIGLVAVGVPLAVPLAALVFLGGFVPIVGAVASGAVAVLVALVTNGWIAALIVLGVVL 298 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I L+P L+G ++L L + GV G++G + L+A++ + Sbjct: 299 AVQQIEGNVLQPLLLGRAVQLHALAVVLAISVGVVISGIIGALLAVPLVAVLNSAIR 355 >gi|154503457|ref|ZP_02040517.1| hypothetical protein RUMGNA_01281 [Ruminococcus gnavus ATCC 29149] gi|153795557|gb|EDN77977.1| hypothetical protein RUMGNA_01281 [Ruminococcus gnavus ATCC 29149] Length = 400 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 113/349 (32%), Gaps = 10/349 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA------VIATV 68 +I+ ++ + + F A +I + + +A V + Sbjct: 30 LILDVLGQGVGIVYPFLLGGAIAFVINVPMSFFEEKLFQNQMMKNKKVAQRLARPVSLII 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + V L +F +S W +I + W L+ Sbjct: 90 TLIVVVSVIGLVVFGVLPKLGDTFISIGKGIQSFMPKAQSWAEEIFHNNKEIKEWLDSLT 149 Query: 129 HPQSLKILSETFLKTNGIDFIPR----FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I T+G + A R + ++ +F L + I Sbjct: 150 LDWDKIINEVVKFFTSGASSVLGSTFVVARRIASGITTFVIAFVFACYILLQKEKLNIQI 209 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + + + + + G + A+ G + + +P + + Sbjct: 210 RKVMYAYMKEDLVKKVLDVCSLSYRTFSNFLTGQCLEAVILGTMFVICMGILQMPYAMLI 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ A A+IP V +L++ A + I I + P +VG Sbjct: 270 GVLIAFTALIPIFGAFIGCVVGAFLILTVAPMKALVFVIMFLILQQIEGNLIYPRVVGSS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + LP + + G MG++G+ + +++++ + + + E K Sbjct: 330 VGLPSIWVLAAVSIGASLMGIVGMLVFIPIVSVLYALLRGDVYEHLEKK 378 >gi|94501026|ref|ZP_01307550.1| membrane protein, PerM family protein [Oceanobacter sp. RED65] gi|94426773|gb|EAT11757.1| membrane protein, PerM family protein [Oceanobacter sp. RED65] Length = 361 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 108/342 (31%), Gaps = 24/342 (7%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 V + + AP L+++++ + + ++ + ++ V L+ Sbjct: 31 FVIILTMGAILAPALASVVLAYLLQGPLLALKRLGVGHLAASVLVFLLFLIVCLAVILVL 90 Query: 81 ---LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ EL + + + + +P D+ L L Sbjct: 91 APAVWTQITQLFGELPNMLNQMQKLAVVLPERYPDVFDEAQIKALGAAMAEEIGRL---- 146 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ---LDSLGEH 194 + + + +I + I +FFF +DG + + + Sbjct: 147 --------GQAAVELSLSTLPNLVAILIYMILVPILVFFFLKDGDVMVRWWVSIMPTKRI 198 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L W+++ + IR L + I+ G V A+ + GV L ++ +I Sbjct: 199 LIGRVWREMDQQFANYIRGKVLEIVIV----GFVTYIAFAIMGVRYAALLALLVGFSVVI 254 Query: 255 P-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P GA + V + + G + L I + L P L + L + Sbjct: 255 PYIGAAVVTVPVVLIGYFQWGLTSDFYYLVAVYFIIQALDGNVLVPLLFSEAVNLHPVVI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ GL G+F L L + ++ ++ Sbjct: 315 ILSVLMFGGLWGLWGVFFAIPLATLFKAVLTAWPRGVRAAQQ 356 >gi|258621078|ref|ZP_05716112.1| permease PerM, putative [Vibrio mimicus VM573] gi|262166255|ref|ZP_06033992.1| permease PerM [Vibrio mimicus VM223] gi|258586466|gb|EEW11181.1| permease PerM, putative [Vibrio mimicus VM573] gi|262025971|gb|EEY44639.1| permease PerM [Vibrio mimicus VM223] Length = 356 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 122/353 (34%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P I+ +++YF AP+L A+++ + WP+ + + T VI Sbjct: 15 DPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQ--LRRLRIPRTVAVVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 L I+ + L ++ L++ V ++++ +P Sbjct: 73 VITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQ---QFITSLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HL +S+ ++ + G + + + + +I + + +FF +D + Sbjct: 126 HLEIVESVISNAKNKVLGMGETVVKGSLASL-VSLATLGVYLILVPLLVFFLLKDKQEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + I G V + + + V L Sbjct: 185 RMASGVLPR-NRKLATKVWEEMNQQISNYIRGKVLEIIIVGTVSYITFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L + G L + I + L P L Sbjct: 244 VAVGLSVLIPYVGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPILFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ +WK E + I Sbjct: 304 AVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLEDEPEASI 356 >gi|171464071|ref|YP_001798184.1| protein of unknown function UPF0118 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193609|gb|ACB44570.1| protein of unknown function UPF0118 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 329 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 103/315 (32%), Gaps = 6/315 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P L+A I+ + P+ F + + A ++ + +CL L L E+ Sbjct: 5 FTPFLTAFILAYALHPVCLWFEQHRLPRA-LAAAVSMLIGLCLVFFILSLLISLLKYEIP 63 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + +++ + WL + + W + + Sbjct: 64 LIKAQLPDWIANTQ---AWLGPKLSELHINLDWGTLRESATQKITEHINDNADSLMSSTI 120 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G + ++ + +I +F+ D + + ++ + Sbjct: 121 STVLMSGSSVIAGFVNAVLIIFVMFYLLMDWTYFFGLVKGIVPVRAQETVHHLAMHTDGL 180 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIY 268 + GM I+ + + GV ALG TA+M +IP A Sbjct: 181 LSQYLRGMLIVISIMAIFYSAGLSFIGVKGAAALGAFTALMIVIPYIGITIGLTLATLSA 240 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LL G +F+ I F+ L P LVG I L + F L+ + G G+ Sbjct: 241 LLQFGPGTEIIGVFILFGIGQFLESFFLTPRLVGERIGLHPVAVLFSLLCFGKLFGFFGV 300 Query: 329 FIGPVLMALIAVIWK 343 + + A+ V+ K Sbjct: 301 LLALPISAVSLVLVK 315 >gi|219668948|ref|YP_002459383.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] gi|219539208|gb|ACL20947.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] Length = 354 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 126/352 (35%), Gaps = 3/352 (0%) Query: 1 MRETMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+E + +I FI++ + Y+ FAP + AL+ P + + + Sbjct: 1 MKEFAKKVAVTLLVIIAFILIPLVAYYALPHFAPFIFALVFALLLEPFNQWLMKWPKINR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A I+ + F++ FL E EL+ + + + + Sbjct: 61 PVAANISYFVFLGGFLLLAYFLITKITSEAYELIKFIQRNIPNIQFWFNDANQRINELIM 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 Q++ + N + + ++++ IAL+ Sbjct: 121 VLPPEMVAQINQTITGFANQLSSINLLSTWGAQTISITASIPIFFITLLIFFIALYMINL 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + ISQ+ S + + + +++ +V + + Sbjct: 181 NLHHISQRFFSYFKKESKPKAIAVLSDLRNATIGFLKAQVVLSTFTYIVSLGGLLILDMR 240 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ I+ ++P G I L+ G+IF+ L L I + ++ K + P Sbjct: 241 YALVLALLIVIVDILPILGTGSVLVPWGIVLITLGDIFSGLGLILL-FIVITVLRKIIEP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++G I L L T + G + MG+LG+F+ P+L+ + K ++ + Sbjct: 300 KILGERIGLGPLSTLISIWVGFKVMGVLGVFLAPLLIIFYKALVKAKVIQYR 351 >gi|116514279|ref|YP_813185.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093594|gb|ABJ58747.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 377 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 7/247 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L+ + + S +L+ G + + + + F +I + Sbjct: 127 LESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIFAIY 186 Query: 177 FYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F DG I+ L +L K + G I A GL++ A Sbjct: 187 FLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRAFSGYIRGQIIDAFIVGLLVSLA 246 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +A VP + +G++T + +IP PI + I A + + + + + Sbjct: 247 MLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAI 306 Query: 293 D-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L P L+ I + L ++ G G +G+ I + AL+ ++ I ++ Sbjct: 307 DGNILNPKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAYRQK 366 Query: 352 NKEKISS 358 EK Sbjct: 367 QLEKSKE 373 >gi|21910312|ref|NP_664580.1| hypothetical protein SpyM3_0776 [Streptococcus pyogenes MGAS315] gi|71910652|ref|YP_282202.1| hypothetical protein M5005_Spy_0839 [Streptococcus pyogenes MGAS5005] gi|21904508|gb|AAM79383.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|71853434|gb|AAZ51457.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS5005] Length = 375 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 113/296 (38%), Gaps = 8/296 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + ++ +S + + I ++++ + Sbjct: 80 ICLLLAYLTFFILITWIISIVIPDLITSISTLTKFDTITIQ--EVVNNLEHNKLLARTIQ 137 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 ++ L + + F+ + + + +++ + + Sbjct: 138 -YIGGDGKLTETIANYSQQLLKQFLTVLTNILTSVTVIASAIINLFISFVFSLYVLASKE 196 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q ++L + Y K+I ++ + F+ T+ A+ G + S ++ +P Sbjct: 197 DLCRQGNTLVDTYTGKYAKRIHYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLP 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 257 FAGTIGVLVAFTALIPVIGASIGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPK 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VGG I LP + + G G++G+ I L A + + K++I + ++K Sbjct: 317 VVGGSIGLPAMWVLMAITIGASLKGIVGMIIAVPLAATLYQVIKDNIQKRQAIQKK 372 >gi|289434213|ref|YP_003464085.1| hypothetical protein lse_0846 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170457|emb|CBH26997.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 348 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 119/355 (33%), Gaps = 25/355 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I + LY L+ +L I F + + + + + Sbjct: 5 EKLKENNTARRVLVFILIGIVLYLLRSMINLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P ++ G Sbjct: 65 VIVLYTLVALFLYVAIVHFLPILIDQISQLVDSLVKIYNN--PPDNAVAKWVVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IEKYLQ---------------TGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L P Sbjct: 164 RVTSFTGQFLTSKVGFIFKEAAFFGKKFVGTFGVVLEAQLMIALVNTIITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + L I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGLQDVFYILLTVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ LP TF L+ G+ GL +G + + I KE + Sbjct: 284 KLMSSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILDVRNAEDKEKR 338 >gi|145628556|ref|ZP_01784356.1| lipoprotein NlpI [Haemophilus influenzae 22.1-21] gi|145639850|ref|ZP_01795451.1| hypothetical protein CGSHiII_03585 [Haemophilus influenzae PittII] gi|144979026|gb|EDJ88712.1| lipoprotein NlpI [Haemophilus influenzae 22.1-21] gi|145271068|gb|EDK10984.1| hypothetical protein CGSHiII_03585 [Haemophilus influenzae PittII] gi|309750345|gb|ADO80329.1| Putative permease [Haemophilus influenzae R2866] Length = 349 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 117/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + WL ++P Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKS---NEWLLNLPENYPELID 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S S++ F ++ + M + + + + +FF +D Sbjct: 128 YSMVDSIFNSVREKILGFGESAVKLSLASI-----MNLVSLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + +K + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLPKNRNLAFK-VWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYSL 241 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFL 300 L + ++P GA I V++ L + I + ++D L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|307687574|ref|ZP_07630020.1| hypothetical protein Ccel74_05413 [Clostridium cellulovorans 743B] Length = 383 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 116/341 (34%), Gaps = 10/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA-----VIATVSV 70 ++ ++ L F A I+ + F + L + + + Sbjct: 31 VLGVLSYCYTLLLPFILGGCIAFILNIPMNYFSNKFSRVQGNKLGSLVRKGNKIFSLILS 90 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSH 129 L + ++ + + ++ E ++ ++ + V W+ ++ + Sbjct: 91 FVLVLGVIILVLALVIPQIAETAKRLPTTFENASVIVKSWIENVDWLSNDIINKINVIEI 150 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + NG + FL+ ++ ++ + D ++S+Q Sbjct: 151 DWNSVFNEIKSSVFNGAGSMISSTIGVATSFLNGVVNFSLGLVFSIYLLLDKENLSKQCK 210 Query: 190 SLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + P +I+ + K + G + A+ G + + P + + Sbjct: 211 KILYAFLPKEKVVSILEIASLANKTFSNFLTGQCVEAVILGFLFFVTMSILHFPYAMVVS 270 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V A A+IP + +L++ N A + + I + P +VG + Sbjct: 271 VFIACTALIPVFGAFIGGGLGFFLIVMDNPTKALLFLVLFLVLQQIEGNLIYPRVVGNSV 330 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G + MGL G+ I L ++ V++++++ Sbjct: 331 GLPSMWVLVAITLGGKLMGLTGMLIFIPLCSVAYVLFRKAV 371 >gi|149181715|ref|ZP_01860207.1| hypothetical protein BSG1_18170 [Bacillus sp. SG-1] gi|148850563|gb|EDL64721.1| hypothetical protein BSG1_18170 [Bacillus sp. SG-1] Length = 331 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 116/316 (36%), Gaps = 2/316 (0%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y++ P+++A++ P + + +I + M + F+ Sbjct: 2 IYYILPVSIPLITAIVTALLLDPAVKMLERRFKIKRKLAVLIVFIIFMLAIGLLSYFVIT 61 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E +LV + + ++ +F + Sbjct: 62 KVVGEGVKLVEDMPAYINQLSDIWLSYEKQLTNAAKDLPIEIVTQTSNEVQDFLNSFKNS 121 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 S F +Y +S + +IALF F D I Q L S + Sbjct: 122 LRDYLDIEKISAFLAYIPNYLVSFLVYLIALFMFMLDLPRIKQTLFSHLTEKTAEKVNFM 181 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 + + VI F +++I + V + +I ++ IP G+ + Sbjct: 182 TSRLSYVIFGFFKAQFLVSIIIFVTSLIGLLFIAPEVAVVMSIIIWVIDFIPLIGSIVVL 241 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++Y L+ GN+ T L + A+ L I+ +T+ P ++G I L L T + G++ Sbjct: 242 FPWAMYHLLSGNLTLGTELAVLAAVLL-IIRRTVEPKVMGSHIGLSPLATLIAMYLGLKL 300 Query: 323 MGLLGLFIGPVLMALI 338 +G+LG +GP+++ + Sbjct: 301 LGVLGFILGPLILIIF 316 >gi|255975625|ref|ZP_05426211.1| membrane protein [Enterococcus faecalis T2] gi|257082332|ref|ZP_05576693.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257416315|ref|ZP_05593309.1| membrane protein [Enterococcus faecalis AR01/DG] gi|307277837|ref|ZP_07558921.1| hypothetical protein HMPREF9515_00171 [Enterococcus faecalis TX0860] gi|255968497|gb|EET99119.1| membrane protein [Enterococcus faecalis T2] gi|256990362|gb|EEU77664.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257158143|gb|EEU88103.1| membrane protein [Enterococcus faecalis ARO1/DG] gi|306505234|gb|EFM74420.1| hypothetical protein HMPREF9515_00171 [Enterococcus faecalis TX0860] Length = 366 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEVLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|239942580|ref|ZP_04694517.1| putative integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|239989041|ref|ZP_04709705.1| putative integral membrane protein [Streptomyces roseosporus NRRL 11379] gi|291446042|ref|ZP_06585432.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291348989|gb|EFE75893.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 368 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 102/299 (34%), Gaps = 21/299 (7%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ I+++ + A + +++ + + + ++V+ + A Q Sbjct: 58 PVHRWLIARRLNR-SLAAGLTCAALVAVVGGAGYIVVTALVDSGDQIVASLKDAGQ---- 112 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W+ L + L ++ ++ G S + Sbjct: 113 ---WV--------VDHLEIAGATDVDDLADNAKGLVEKFGASAAGGLLSGI-SLIGSLVA 160 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + ++ FFF RD ++ + + R + + G T IA+ + Sbjct: 161 TSVLALLLTFFFLRDSDRAVNLAHTVAPRGTGDLVEAMGRRAFEAVEGFMRGTTFIALID 220 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + + VP V LG + + A IP AV++ L+ + L+ G Sbjct: 221 AVCITVGLLILDVPGAVGLGALVFVGAYIPYLGAFLSGAVAV-LVALADRGFVIALWALG 279 Query: 286 AI--ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + + L+P + +++ L G GLLG+ + P+ A V+ Sbjct: 280 VVLAVQVLEGHVLQPMIQSRTVQMHPAMIMIALTAGASVAGLLGMLLAVPLCAAAFGVL 338 >gi|116513954|ref|YP_812860.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093269|gb|ABJ58422.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125615|gb|ADY84945.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 357 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 27/354 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAV 64 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 10 KNNIHLRRATVLVMIILALYYVRAMMNTILLTFIFTYLILHLVRFVQGKFKHVSDKLIVA 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L L + + ++ ++ V+ Q W Sbjct: 70 LTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQTNDVD----------------WL 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H + + +K++ F +S + ++ FF+ + + Sbjct: 114 MTQLHKHVSEKTISSQVKSSLTALTAAL-----KGFGSVTMSFVMALVLSFFYTIELKEM 168 Query: 185 SQQLDSLGEH----LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S + F R +IAI + + +P Sbjct: 169 QTFSQSFLKSDLFGWFFEDIAYFGRKFTNTFGVVLEAQFLIAICNTTLTIVCLAIMKMPQ 228 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ALG++ I +++P G IS +S+ G I + + + A+ + L P Sbjct: 229 IFALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPK 288 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +LP TF L+ G G GL + + I + K+ K Sbjct: 289 FMSSKTELPIFYTFVALLFGEHFFGTWGLIVSVPIFTFFLDILGVKNINSKQEK 342 >gi|291457935|ref|ZP_06597325.1| membrane protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419479|gb|EFE93198.1| membrane protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 408 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 6/206 (2%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F+ S FG + S +F +I +F DG +I++ LF ++ + Sbjct: 189 GFLQGILSTFG-NVGSFLSSFVFALIFCIYFLLDGENIARYWGRAFRLLFGERIFRLLGV 247 Query: 207 V----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS- 261 + G I A+ +++ + L GV + +G++T I +IP P+ Sbjct: 248 FLSDADRAFSGYIRGQIIDAVIMMVLVSAVLALVGVKYALIIGILTGIGNLIPYTGPLVA 307 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + + L+ G+ + + + P L+ + + L L+ G Sbjct: 308 YGSTLLICLLYGDYRRLLIALPLLFVIQTLDGNIINPKLLSDSVNVHPLLVIASLLIGGA 367 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 G LG+ I + +L+ + + + Sbjct: 368 AGGFLGMLIAVPVGSLLKIQFDRLLR 393 >gi|313638619|gb|EFS03751.1| membrane protein YdbI [Listeria seeligeri FSL S4-171] Length = 379 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 119/355 (33%), Gaps = 25/355 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I V LY L+ +L I F + + + + + Sbjct: 36 EKLKENNTARRVLVFILIGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 95 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P ++ G Sbjct: 96 VIVLYTLVALFLYVAIVHFLPILIDQISQLVDSLVKIYNN--PPDNAIAKWFVGFLKESN 153 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 154 IEKYLQ---------------TGVDFIIVSLSGIGSVGLSFFLALILSL----FFSLEKE 194 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L P Sbjct: 195 RVTSFTGQFLTSKVGFIFKEAAFFGKKFVGTFGVVLEAQLMIALVNTIITTIALYLMDFP 254 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + L I I L P Sbjct: 255 QLLSLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGLQDVFYILLTVVIVHAIETYILNP 314 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ LP TF L+ G+ GL +G + + I KE + Sbjct: 315 KLMSSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILDVRNAEDKEKR 369 >gi|86159816|ref|YP_466601.1| hypothetical protein Adeh_3397 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776327|gb|ABC83164.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 412 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 80/210 (38%), Gaps = 1/210 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + F+ + ++ + + F D I + +++ + A +++ + Sbjct: 178 VVAFSRAILAGTVQTLFFVVLLFMLTAFISMDAPRILRWFETVVPSHWRADLRRLRTGID 237 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 + G I + G++ + VP ALG + ++ ++P G +S + + Sbjct: 238 AGLSGVVRGQLTIMVVNGILTLVGLLVLKVPFAFALGFLAFVLYIVPIFGTILSSVPIVL 297 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L G A W + + L P ++G ++ + LV G R+ G++G Sbjct: 298 LALTGGGPTKALLALGWITVVHALEAYVLNPKIMGDAARIHPVLIVLALVVGERSFGIVG 357 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + +++ +++ E E+ + Sbjct: 358 ALLAVPVASVVVAVFRFLHRKQVELDERAA 387 >gi|307293285|ref|ZP_07573131.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306881351|gb|EFN12567.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 369 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 113/315 (35%), Gaps = 13/315 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P+ +AL++ P + S A+ A + + + L+ + Sbjct: 27 FFLPLTAALVVAIALVPFLEWMERRSVPSP-LAALTAVIVFLLVANTALVLIVVPAADWF 85 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + L ++ + P+ + S + + E + P + + + + F Sbjct: 86 RLLPERLPKIQNNLAPLIDFYSQL--QRFVDETVQMLATGPVAAAQTAAVDAPRSLLQFA 143 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW-KKISRIVP 208 A + ++F ++ ++FF + ++ + E A ++ + V Sbjct: 144 ATSAPS-------AIIQMVFALLIIYFFLAGWTKLRRRTINSRESFDGAMAVARVIQNVV 196 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVS 266 + L + I + GL + A WL G+PS + G I A++ +P P+ + Sbjct: 197 DATSAYVLTIATINLCLGLAVAFALWLIGMPSPLMWGGIVALLNFVPYFGPMLAAALLGL 256 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L++ +++ A + + P ++G + + L L G Sbjct: 257 GGLMVFDDVWKALLPAALQIGFHLVEANFVTPTILGRRLTMNPLLILVSLTFWGWVWGTP 316 Query: 327 GLFIGPVLMALIAVI 341 G +G L+ +I + Sbjct: 317 GALLGVPLLIIIQTV 331 >gi|154687049|ref|YP_001422210.1| YtvI [Bacillus amyloliquefaciens FZB42] gi|154352900|gb|ABS74979.1| YtvI [Bacillus amyloliquefaciens FZB42] Length = 371 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 2/197 (1%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + ++ + IF ++A FF +D + L S+ A K +S Sbjct: 158 LSHLLELVPKWIAFLPNTAAVFIFAMLATFFMTKDWHKLKALLYSILPERVSANAKAVSG 217 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + K + ++ + +++ +L G+ + ++ ++P GA F Sbjct: 218 ELKKAMAGFIKAQAVLILFTMIIVFIGLFLLGIEHAATIAFFIGLVDLLPYLGAGSVFVP 277 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +YL I G + A L + I + I + P ++ I L L T L G + G Sbjct: 278 WIMYLAIAGQLPQAIGLGVLY-IVVLIQRQLTEPKILSKSIGLDPLATLIALFAGFKLFG 336 Query: 325 LLGLFIGPVLMALIAVI 341 +LGL GP L+ I Sbjct: 337 ILGLAAGPALLVFIQAF 353 >gi|324990430|gb|EGC22368.1| permease [Streptococcus sanguinis SK353] Length = 322 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 110/325 (33%), Gaps = 7/325 (2%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ +I F + + ++++ +F+ +L + +L + L Sbjct: 1 MIYGAVIAFVLNVPMKKIEQYLVKLKVKAELRRPIAMVLVFLALILIVIALLVLVLPTLA 60 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + V L + G LS S + + I F+ Sbjct: 61 QTISQLGTVLSTVLTQLGKLLGSSEFVT--KDMLSTIVSGIQGQSSSISQALIGFLSGLT 118 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY----WKKISRIVPK 209 S G ++ +I+ F F ++ L + P I ++ + Sbjct: 119 SNIG-NIFSSLMNAFLIIVFTFSFLSSKEHLAAMTSRLLKVFLPEKVVIKLTYIGQVALE 177 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + I A+ G+++ Y + G+P V G+ +++ IP P+ V Sbjct: 178 TYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGVMTGIFAGVLSFIPYVGPMIACVVGAIF 237 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + A L + I + P +VG I LP + T G GLLG+ Sbjct: 238 IFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQSIGLPAIFTLAAASIGGNLFGLLGMI 297 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 + A+I + KE ++A + + Sbjct: 298 FFTPIFAVIYRLVKEFVVAKENQLD 322 >gi|16331491|ref|NP_442219.1| hypothetical protein sll0060 [Synechocystis sp. PCC 6803] gi|8928468|sp|Q55153|Y060_SYNY3 RecName: Full=UPF0118 membrane protein sll0060 gi|1001147|dbj|BAA10289.1| sll0060 [Synechocystis sp. PCC 6803] Length = 344 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 112/320 (35%), Gaps = 16/320 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ F L A I+G+ P+ + + ++ + V L + + Sbjct: 41 LRIFIIANLVAFILGY---PV-RWLQRYPRLKLPYAVALVLLTTAIILAVIGLLVIPKLV 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ ++ + N G L ++ S W + + LS F N I Sbjct: 97 DQIRTVLQLLPHLNALGDRHLESLDNL------SNQWEIPTNFRAWGRELSNEF--PNQI 148 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I + + F+ I + G + + + K+ + Sbjct: 149 RSITNQLINLLIWTAGSLVEAGFIFIMTVYLLLRGQTFWDGIFRWLPI---DWRHKVRQR 205 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++ ++G +A G+ L + + VP + G+ MA P G S +S Sbjct: 206 LRHSFQNYYIGQATVAALLGVSLIISLSIFQVPLALLFGMFVGFMAFFPFGGGTSIVLIS 265 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + +I+ + + +V+ L P L+G + + L+ G + GLL Sbjct: 266 IIASFQ-SIWLGIKVLAIATVVDQVVENGLAPKLLGRVTGVHPVWILLSLMIGAKVAGLL 324 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+ + + + I + + I Sbjct: 325 GILVAIPIASFIRDMLNDFI 344 >gi|169824238|ref|YP_001691849.1| putative permease [Finegoldia magna ATCC 29328] gi|167831043|dbj|BAG07959.1| putative permease [Finegoldia magna ATCC 29328] Length = 381 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 110/333 (33%), Gaps = 6/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F A ++ I + + K I+ + + + L F+ Sbjct: 44 IISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLKRAISLLISLVIVSAILTFVVTLI 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ + R +I T ++ L + + +L NG Sbjct: 104 IPNFLEAIKSLIQGIPVLVEKLRKYPEI-AKQLDKIYDTYAITSTHDLFVKLKPYLTKNG 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D + +F ++ A++ + ++ +Q L F K Sbjct: 163 LDILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSK-ETLRRQFTELTYVFFGGKTAKRII 221 Query: 206 IVPKV----IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + KV S F G I A G + +L +P+ + V+ A+IP I Sbjct: 222 VFFKVAYEKFYSFFKGQFIEAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAIL 281 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A+ +++ + A ++ + P +VG + LP + + G Sbjct: 282 GAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLVAVTIGAA 341 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ I + A I + E+K Sbjct: 342 VSGIVGMLIFVPIFATIYELLYRYKKKKLEDKN 374 >gi|118581304|ref|YP_902554.1| hypothetical protein Ppro_2899 [Pelobacter propionicus DSM 2379] gi|118504014|gb|ABL00497.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 344 Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 112/342 (32%), Gaps = 11/342 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ +I + Y L+ + L + +I + P+ + T Sbjct: 8 KLIAVILLLCLIAAAGYALQHTISCFLLSWVIAYLLDPLVMRIEKRTLRR--------TR 59 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ L+ + + ++ + + +L + + + I W L ++ S Sbjct: 60 ALVLLYAILGILSIFFMAIMVPKLTMGWDSFVEDLPLYIQKIKQI-ALEWKIRLPDRYGS 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + + FG +I+ I +FF ++ L Sbjct: 119 DEIQWLIDKVSNNIDSAAQKAGVMVYSFGSRIFFNIFNIVLSPILVFFMLYYKQTVIDTL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S A I V + I G I++I L+ A + + + G+ Sbjct: 179 KSWLPEERKAVIIDIGLEVNRSIGGYLRGQVIVSIIVALLSTVALLVLDIAHPIFCGIFA 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIK 306 +++P + T +++ A A+ F+ ++P + + Sbjct: 239 GAASVLPFIGVLIATLPALFFAWYQYQSIAILSQTGFAFALIYFLEGYIIKPLIFKESMN 298 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L L T ++ +G G+ + + A I + W + Sbjct: 299 LNPLMTIVMVMALGELLGFWGIMLALPIAAAIKITWGHYLRG 340 >gi|224538326|ref|ZP_03678865.1| hypothetical protein BACCELL_03217 [Bacteroides cellulosilyticus DSM 14838] gi|224520048|gb|EEF89153.1| hypothetical protein BACCELL_03217 [Bacteroides cellulosilyticus DSM 14838] Length = 376 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 126/365 (34%), Gaps = 21/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R +I+ I++ + L G P A +I + +P+ S F K Sbjct: 1 MERKKITFDSFIRAVILGAIIIGVLMLLKRLSGVLLPFFLAWLIAYLIYPLVSFFQHKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE----MKELVSKVVLANQHGIPVPRWLSD 112 + +++ + + + +L M++ +K+L+ + VP LS+ Sbjct: 61 LKNRIISIFCALFTLSVIGSVAFYLLVPPMIQEFLRVKDLLIEYFSTTHTASNVPTTLSE 120 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + S L L T K + S + + + ++ Sbjct: 121 FIRQNIDLHILEQMFSQENILDALKVTVPK------LWSLISESINLLFGFFTVFLILLY 174 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F D SIS+ L + I V + F G ++A+ G++ Sbjct: 175 IVFILL-DYESISEGWAHLMPKKYRKTVTGILNDVKDGMNRYFRGQALVALCVGILFSIG 233 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGA 286 + + P + LG+ + M+P I F + ++ G+ F Sbjct: 234 FLIIDFPLAIGLGLFIGALNMVPYLQIIGFVPTIMLAILKAADTGDNFWIIIASATAVFI 293 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I D L P ++G L L MG+LG+ I L L+ ++ I Sbjct: 294 VVQIIQDGYLVPRIMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRYI 353 Query: 347 MAIKE 351 + + Sbjct: 354 INQEN 358 >gi|254520082|ref|ZP_05132138.1| permease [Clostridium sp. 7_2_43FAA] gi|226913831|gb|EEH99032.1| permease [Clostridium sp. 7_2_43FAA] Length = 378 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 113/338 (33%), Gaps = 12/338 (3%) Query: 26 FLKGFFAPVLSALIIGF--------TSWPIYSSFISKKEESSTFLAVIAT-VSVMCLFIV 76 L F A ++ + + S L+++ T ++V+ L I Sbjct: 41 ILSPFIIAFAMAFVLNLPMKFFEKNVFYFLDKEKSSFVRGLKRPLSILTTFITVIGLIIA 100 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LF+ + + L+ V + + L+ +S + L Sbjct: 101 LALFVIPQLVSSVSTLLDTVPEYIKSFEALINEFVS--STEILQNLYNTLMSTWKELLQF 158 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L T+ + +++ LSI+ I L + + L + + Sbjct: 159 FGGLLTTSLTGILNT-TMNITSGVVNFVLSIVLTIYMLASKETLIYHFKKILYAFSKKSI 217 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +I R+ G I A+ G + + +P + + V+ + A+IP Sbjct: 218 ADKIIEIGRLANVTFAKFITGQCIEAVILGALCFVGMNIFSMPYSLLISVLIGVTALIPV 277 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 T +++L++ N A ++ + P +VG + L + + Sbjct: 278 FGAFIGTIPAVFLILIINPIQALWFIVFILCLQQFEGNIIYPKVVGNSVGLSAIWVMLAM 337 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G T+GL+G+ IG ++ + KE NK Sbjct: 338 LVGGSTLGLIGMLIGIPTFSVAYQLIKEYTNKRLINKN 375 >gi|94990464|ref|YP_598564.1| hypothetical protein MGAS10270_Spy0955 [Streptococcus pyogenes MGAS10270] gi|94543972|gb|ABF34020.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10270] Length = 382 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 113/296 (38%), Gaps = 8/296 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + ++ +S + + I ++++ + Sbjct: 87 ICLLLAYLTFFILITWIISIVIPDLITSISTLTKFDTITIQ--EVVNNLEHNKLLARTIQ 144 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 ++ L + + F+ + + + +++ + + Sbjct: 145 -YIGGDGKLTETIANYSQQLLKQFLTVLTNILTSVTVIASAIINLFISFVFSLYVLASKE 203 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q ++L + Y K+I ++ + F+ T+ A+ G + S ++ +P Sbjct: 204 DLCRQGNTLVDTYTGKYAKRIHYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLP 263 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 264 FAGTIGVLVAFTALIPVIGASIGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPK 323 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VGG I LP + + G G++G+ I L A + + K++I + ++K Sbjct: 324 VVGGSIGLPAMWVLMAITIGASLKGIVGMIIAVPLAATLYQVIKDNIQKRQAIQKK 379 >gi|157375572|ref|YP_001474172.1| hypothetical protein Ssed_2435 [Shewanella sediminis HAW-EB3] gi|157317946|gb|ABV37044.1| protein of unknown function UPF0118 [Shewanella sediminis HAW-EB3] Length = 361 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 104/304 (34%), Gaps = 14/304 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A V + ++ L + L++ + G+ Sbjct: 54 WPVAQMI--KVGMNRTTAASAVLVLFIGTMLLITFGLVPSIWKQGLALITDLPTMLDKGL 111 Query: 105 PVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + +++ P + +L ++ + L T + I + + L Sbjct: 112 HTAQSYVNQYPQFVNPDQL--------DTMVGELKKMLDTQHLLDIGKQIIGYSASLLVL 163 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I + + +FFF +D + + +K+ + + I + G I I Sbjct: 164 MVYAILVPLLVFFFLKDKDELIKGSKRFIPT-NRELARKVWYEMHQQIFNYIRGKVIEII 222 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 G V + + + LGV+T + +IP GA + +++ + I Sbjct: 223 IIGGVSYVFFAIMDLRYAALLGVLTGLSVLIPYVGATLVTLPIALVAFFQWGISPEFGYL 282 Query: 283 LWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 283 MLGYGIIQALDGNLLVPILFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAV 342 Query: 342 WKES 345 Sbjct: 343 LNAW 346 >gi|295101910|emb|CBK99455.1| Predicted permease [Faecalibacterium prausnitzii L2-6] Length = 426 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 118/350 (33%), Gaps = 21/350 (6%) Query: 27 LKGFFAPVLSALIIGFTSWP--------IYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + G P + +I + P ++ F K + LA+ AT+ L + L Sbjct: 45 VTGILMPFIYGAVIAYLLKPVCNTIEGFLHRIFPEKLHSMANMLAIAATLLFGVLVVYAL 104 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + + S A +W++ +E + + + + + Sbjct: 105 VMMVVPQL--ITSVTSLYYTAQTSITRFMQWVNT-QEVFLDNETLMGYFNDAYDVIVNNL 161 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCL------SIIFMIIALFFFYRDGFSISQQLDSLG 192 T L+T + + + + +++ +I + ++Q + Sbjct: 162 TALRTTLLPSLQNIQGILSGVGVGVMNVVTWFKNLLIGLIVAVYLLASRKKFAKQAKMIL 221 Query: 193 EHLFPAYWKKISRI----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +W ++ + K+ G + + G++ A + PS + + VI Sbjct: 222 YSVVKPHWAQLIQEEVLYADKMFGGFINGKIMDSAIIGVLCYFACIIFKFPSALLVSVII 281 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P + L++ + A L+ + + + P ++G L Sbjct: 282 GVTNVIPFFGPFIGAVPATLLILIQSPIKALWFVLFVLVLQQLDGNVIGPKILGNTTGLS 341 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++ G G+ G L A+I + K+ + ++ Sbjct: 342 SFWVLFSILLFGGLWGFAGMIAGVPLFAVIYDVIKKLVFHGLRRNGQLDQ 391 >gi|260584496|ref|ZP_05852243.1| membrane protein [Granulicatella elegans ATCC 700633] gi|260158014|gb|EEW93083.1| membrane protein [Granulicatella elegans ATCC 700633] Length = 365 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 120/326 (36%), Gaps = 9/326 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P++ L++ F + ++ ++ +++++ + + + + + + Sbjct: 39 MSPIVLGLLMAFIFNVPMKHMEKQLKKIKVPPSLRRSIAILGVLFIFIAIVVAISWIIVP 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L VV + + + + + W + + ++++ + ++ + F+ Sbjct: 99 TLARTVVQLGESFNYLMDFCVNW----IQNSGWLQAADVERITGFINQSNIVSSVVSFLG 154 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F S +I+ + + + + L + + P K+ + + K+ Sbjct: 155 GFTSNI-TGIFSNVFTILMAVFLMLNILGSKEQLQYLITRLLKVILPENRYKLLQYIGKI 213 Query: 211 IRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 T +G I A+ G ++ Y + +P GV+ +++ IP P S + Sbjct: 214 TLDTYDKFLMGQLIEAMIIGSLVFVTYSVFQLPYAAITGVLAGVLSFIPYIGPFSACMLG 273 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + A I + P +VG I LP + T + G G+L Sbjct: 274 AIFIFTVSPIQALISIGVFYGLQLIEGNFIYPRVVGNSIGLPTVLTLAAALIGGNLFGIL 333 Query: 327 GLFIGPVLMALIAVIWKESIMAIKEN 352 GL L A+I + KE ++ +E Sbjct: 334 GLIFFTPLCAVIYHLVKELVIKREET 359 >gi|104774189|ref|YP_619169.1| hypothetical protein Ldb1304 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423270|emb|CAI98105.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 377 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 7/247 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L+ + + S +L+ G + + + + F +I + Sbjct: 127 LESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIFAIY 186 Query: 177 FYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F DG I+ L +L K + G I A GL++ A Sbjct: 187 FLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRSFSGYIRGQIIDAFIVGLLVSLA 246 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +A VP + +G++T + +IP PI + I A + + + + + Sbjct: 247 MLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAI 306 Query: 293 D-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L P L+ I + L ++ G G +G+ I + AL+ ++ I ++ Sbjct: 307 DGNILNPKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAYRQK 366 Query: 352 NKEKISS 358 EK Sbjct: 367 QLEKSKE 373 >gi|311898722|dbj|BAJ31130.1| hypothetical protein KSE_53550 [Kitasatospora setae KM-6054] Length = 463 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 114/357 (31%), Gaps = 21/357 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKG--------FFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R +++ ++ V L+ L F +L A + P ++ Sbjct: 69 PRWLPRAILLALLGVGLFQLADWAFHQLIDLFVMLLVAFFLSLAMEPAVDRMAAR-GVRR 127 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + V L L + ++ ++ ++ Q I W++ + Sbjct: 128 GLGTFLVFIGVGLAVAGFLAALGTLLVDQITQIAGRLPQLLQDLI---NWINHTFHTDLS 184 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + E + + + + G +F + + + F+F Sbjct: 185 LDQLQHQVLKDSG---TIEKYAQQAADNVWGVTGTVVGGLFQAFTVGLF-----TFYFTA 236 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + + + SL + I ++A+ + + G+P Sbjct: 237 EGPRVRRTVCSLLPPSKQGEVLRAWEIALAKTGGYLYSRALLALVSTFAHWAFFAAIGLP 296 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +M+ +P A+ + + + +A + ++ + I + L P Sbjct: 297 YAAALAVWVGVMSQFVPTIGTYLAGALPVLVGLTVRPVDALWVLVFVTVYQQIENYLLHP 356 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + + F ++ G +G +G I + A + + + + Sbjct: 357 RITARTVDVHPAVAFGSVIAGAALLGAVGALIAIPVAATLQGFVGTYVRRYEVEDDP 413 >gi|260424640|ref|ZP_05778952.1| putative permease [Dialister invisus DSM 15470] gi|260402661|gb|EEW96208.1| putative permease [Dialister invisus DSM 15470] Length = 351 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 85/196 (43%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + +F+ F + +I + F+ + G + S + L + A+ K + + + Sbjct: 145 LAQFSLSAIFSFASTVIELIVVPFITFYMMKKGRTFSNKFAELFPERYHAHIKNLFKEIH 204 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V+++ G ++++ ++ W+ +P + +G++ ++ M+P PI I Sbjct: 205 FVLKAYIHGQLLLSVLMAFLVFIGMWIMDIPYPLVIGLLAGVVEMVPIIGPIIGAVPPIL 264 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + + ++ + + + P L+G I++ + G++ G G+LG+ Sbjct: 265 LGLLQGSSVMIQVIIFYVVVQQLDSHFIMPKLMGSIIEVHPVAIIAGVLIGGSLKGILGM 324 Query: 329 FIGPVLMALIAVIWKE 344 I +A++ ++ + Sbjct: 325 MIAVPAVAVLQILLRH 340 >gi|148273920|ref|YP_001223481.1| AI-E2 family membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831850|emb|CAN02820.1| conserved membrane protein, AI-E2 family [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 377 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 115/334 (34%), Gaps = 17/334 (5%) Query: 14 WMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I + +++ L K P L L+I P+ ++ ++ ++A+ +T+ Sbjct: 41 LVIGIAVAAAVWILIAVKEVVIPFLIGLLICALLEPLVAALRKRRW--PAWVAITSTLLG 98 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I L+ L + + + A + V L+ P + S+ S Sbjct: 99 TAVVISGLVLLLITQIRTGIPTLQR--EAMERFESVRDLLAQPPFNVVPSDYDALLASAG 156 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++L+ E L A G+ + + DG I + + S Sbjct: 157 KALENSREALL---------TGALDAGLGVGHLVTGALLAFFTIVIVLIDGRGIWRFVVS 207 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + R + + +A G + +G A WL G+P + + V+ + Sbjct: 208 VFPRRARPAIDGAGRAGWGTLSAFTRVQIFVAAGNAVGIGIAAWLLGLPLAIPIAVLVFL 267 Query: 251 MAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP I A + + L+ A + + L+P ++GG + + Sbjct: 268 ASFIPVVGAIVSGAFAVVIALVFVGPLQAVIMLAAVIGVHLLESHVLQPLVMGGAVHVHP 327 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G +A + V+ + Sbjct: 328 LAVVLSVAAGSYVGGVAGALFAVPFVATVNVMVR 361 >gi|332178271|gb|AEE13960.1| protein of unknown function UPF0118 [Thermodesulfobium narugense DSM 14796] Length = 361 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 113/318 (35%), Gaps = 1/318 (0%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P++ + + + +++ +++ + + + L + E++ + + + Sbjct: 45 AYLIEPLFKTIL-RFQKNRVISLILSYIIIFVFLGSIGIVLIFGLSNELRSIARHLPIYF 103 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 ++ L + + +T + + F M Sbjct: 104 ENIKNYLDSLQKFLNSFSIPIDIRSSFNGIFLSQEYIQTHPYSLSFSESAKVLKTFFMES 163 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + +++ + + F+ D +I L +L ++S + V++ G + Sbjct: 164 VRIGVNVFIVFMVAAFWIIDFENIKNGLLTLFPPDKRQEIIELSTDIDFVLKRIVRGQFL 223 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 I + G + A + + + +GV+ +++IP +S T ++ L + + + Sbjct: 224 ICLINGALTTLALVVLKIQYAILIGVLAGCLSVIPVFGTLSTTLPAVLLGLTQSWIVSLE 283 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + + L P ++G ++ + LV G + G+ GL + ++ Sbjct: 284 VVIVILCIHWFESYVLSPKIMGKQAQVHPILIILALVSGEQLFGVEGLILAIPATGVLKA 343 Query: 341 IWKESIMAIKENKEKISS 358 + + +++ +S Sbjct: 344 VVMHYLKKAGHLEQEKNS 361 >gi|325845401|ref|ZP_08168697.1| putative membrane protein [Turicibacter sp. HGF1] gi|325488570|gb|EGC90983.1| putative membrane protein [Turicibacter sp. HGF1] Length = 382 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 114/330 (34%), Gaps = 10/330 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESSTFLAVIATVSVMC 72 +I+ ++ PV+ A I + W KK + + + Sbjct: 36 LIIAAIKEFMAVITPVIIAFAIAYILWKPTVFVEKNLQKMTKKLMKRDLSSGASRGISLL 95 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ L + + + IP + + + + + Sbjct: 96 IVVSLVVMLILLLFNTIIPPIITNLKLLVDSIPALHQTFNKYIDDISPYIQSFITEEQIN 155 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + T L + I +F + + +S++ II +F +D ++++ + G Sbjct: 156 EITRAITNLLSYIATQILQFGTGMITNMTGFIISVLTTIILSIYFLKDKETLTRSVYKAG 215 Query: 193 EHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L ++ + + V + I AI G++ G P + +G++T Sbjct: 216 QTLLTPNGLKRSQQFLKDLDAVFGGFLIAQLIAAILAGILSSLILIAIGHPFALLVGLVT 275 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP PI + L + ++ A + I + ++P L+ + L Sbjct: 276 GVANVIPYVGPILGAVLGGLLGLFSSLKMAILSLVLLTIYQQLDANVIQPKLLSNSVGLN 335 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + ++ G +G+LG+ + AL Sbjct: 336 PVWVLIAILIGGHYLGMLGMIVSIPSAALF 365 >gi|281418098|ref|ZP_06249118.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] gi|281409500|gb|EFB39758.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] gi|316939860|gb|ADU73894.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 1313] Length = 372 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 115/342 (33%), Gaps = 17/342 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS------TFLAVIATVS 69 IM + + K FF + A ++ + + ++ + + Sbjct: 29 IMRAVWKFIVLFKPFFMGIAVAFVLNRPCMAVERFLNKRLFKNRLKVLVRGIAITVTYLV 88 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + + F+ + ++ +S + + + LS++ G LS Sbjct: 89 VLLLITLIISFIIPELIKSIQVFLSNMGAYIDNFRDLTNELSELLGLERID------LSS 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + L ++ + +P+ S L + +++ ++ + + Q Sbjct: 143 LDKLILEYTNRLGSSLTELMPKIIS-ITTGVLSFFATLVITVVFSIYILAGKERLIGQCK 201 Query: 190 SLGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + P + R+V V G A G + + + + Sbjct: 202 KVFSTYLPECLYKKGAYVYRVVVDVFNKYIYGQLAEAFILGSLCFIGMVIFRFEYALLIS 261 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ A+ A++P + LL+ + A ++ + + + + P +VG + Sbjct: 262 VLIAVTALVPYFGAYIGGFCAFMLLLMISPTKAIWFLVYLVVLQQLENNLIYPRVVGSSL 321 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LP + + G G +G+ G + ++ + + ++ Sbjct: 322 GLPGIWVVLAAIVGAGVGGPIGVLTGVPIATVLFTLLRNDVL 363 >gi|46907647|ref|YP_014036.1| hypothetical protein LMOf2365_1438 [Listeria monocytogenes str. 4b F2365] gi|226224020|ref|YP_002758127.1| hypothetical protein Lm4b_01428 [Listeria monocytogenes Clip81459] gi|254824521|ref|ZP_05229522.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254829822|ref|ZP_05234477.1| hypothetical protein Lmon1_00635 [Listeria monocytogenes 10403S] gi|254852537|ref|ZP_05241885.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254932604|ref|ZP_05265963.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|255521340|ref|ZP_05388577.1| hypothetical protein LmonocFSL_08960 [Listeria monocytogenes FSL J1-175] gi|300765772|ref|ZP_07075748.1| hypothetical protein LMHG_11889 [Listeria monocytogenes FSL N1-017] gi|46880915|gb|AAT04213.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876482|emb|CAS05191.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605846|gb|EEW18454.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293584163|gb|EFF96195.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593760|gb|EFG01521.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300513547|gb|EFK40618.1| hypothetical protein LMHG_11889 [Listeria monocytogenes FSL N1-017] gi|328465467|gb|EGF36696.1| hypothetical protein LM1816_05950 [Listeria monocytogenes 1816] gi|328475017|gb|EGF45809.1| hypothetical protein LM220_07922 [Listeria monocytogenes 220] Length = 345 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 116/361 (32%), Gaps = 26/361 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V + + I + ++ +LV Sbjct: 65 VLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP G IS ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 Query: 358 S 358 Sbjct: 344 H 344 >gi|328907725|gb|EGG27489.1| putative membrane protein [Propionibacterium sp. P08] Length = 430 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 105/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 E N G+ + I+ + + + + L AP+ L + T++PI++ + K Sbjct: 75 EAATNKHGLPKLTIVLLTVAAAWLGLSFLHELSSVIAPLFFGLNLLITAYPIHTWLVKHK 134 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + + + + + +L S IP Sbjct: 135 CPR-WISATAAGTTVIVVLAAGVAGMVWSVAAMINQLQSY-----------------IPQ 176 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + + II ++ + Sbjct: 177 MEKIYTQLLHWSTQLGYSQEVITDKLKKIDPQQVMSVITSVASDTTSIVMMIIVILTGMI 236 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 237 FMVMDTPQMHDRLRMAGNRKPDVVLA--LESFSSGIRKYWLVTTVFGLIVALFDWAALLI 294 Query: 236 AGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP I ++ L K A + + + F++ Sbjct: 295 IGVPLAGVWALFSFLTNYIPNIGFIVGVIPPALLALFKDGWVAAVAVVVSYSALNFVIQS 354 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 355 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 390 >gi|260461112|ref|ZP_05809361.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259033146|gb|EEW34408.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 389 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 123/330 (37%), Gaps = 14/330 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +F+ + +LYF + FF PV+ A ++ T PI + K+ A + + +C+F Sbjct: 36 IFLFMAIYALYFARAFFMPVILAFLLALTLTPI-VRILRKRGIPEVASATLLVLLSICVF 94 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 G L + + ++ G + L+ + E + + L Sbjct: 95 -------ASAGYLLSSPVFDLINNSSSIGQQLTERLAQL---RRPLEKIMQISHQIEQLT 144 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 S+ S L S+ + + F G +++ Sbjct: 145 ETSQEPGIQKVAVAQSGILSAAASNILSAGTSLTIIFVLSLFLLASGTMFYEKIIQSFAS 204 Query: 195 LFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L ++ V + I L +TII G G V+G W GVP+ + GV A+ Sbjct: 205 LSEKKRALRVVYDVEREISHYLLTVTIINAGLGTVIGLGLWALGVPNPLVWGVAAALFNF 264 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPFLP 311 +P GA ++ V++ LI + + L + +V+ + P +VG +++ + Sbjct: 265 LPYVGALLTIVLVAVIALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRLEINAVA 324 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G +G + L+ +I V Sbjct: 325 IFIAIAFWSWLWGFVGALMAVPLLVVIKVF 354 >gi|228477407|ref|ZP_04062043.1| conserved hypothetical protein [Streptococcus salivarius SK126] gi|228250842|gb|EEK10030.1| conserved hypothetical protein [Streptococcus salivarius SK126] Length = 378 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 121/339 (35%), Gaps = 14/339 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVPLLF- 80 + F A ++ Y + K + +A+++ ++ + L ++F Sbjct: 40 QPFLVGAGIAFVVNILMS-FYEKLLVKFIPFGFITKIKRPIALLSALATIGLVFTWVVFT 98 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L+S+ A + I WL + + + S Sbjct: 99 VLPDLIDSINTLISQDRSAINNLI---NWLLKNKSLQKIIQDLGGVTQVRELINSYSAQL 155 Query: 141 LKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L+ NG+ + ++ +SI+F L + G +++ +D Sbjct: 156 LQQIMNGLTSFLTSLTSLPSTLINLFISIVFSCYVLAGKEKLGNQVNRLVDVYLGRY-GK 214 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + I+ R+ F+ +I A G + + P + ++ AMIP Sbjct: 215 TFHYVVAILNNRFRNFFVYQSIEACILGTLCYIGMRIFDFPYAATISILIGFSAMIPVVG 274 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L++ ++ A + I + P++VGG LP + F + Sbjct: 275 AYIGVTIGTILIMTHSVTLALLFIAYVVILQQFEGNLIYPYVVGGSTGLPGIWVIFAITI 334 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G G+LG+ + + A + I K++++ +E K + Sbjct: 335 GSALGGILGMLVSVPVAATLYQIVKDNVVRREEAKAANA 373 >gi|329571947|gb|EGG53620.1| hypothetical protein HMPREF9520_02429 [Enterococcus faecalis TX1467] Length = 366 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVITYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L ++ + + +L + + H + L D I + L + Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERF 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ T + + FL+ L++I I AL F + + L Sbjct: 143 LNQ---WTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + A G+ + V V LG++ I MIP Sbjct: 200 VYKQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIP 259 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ + + L G + A + L I I + P ++G + + + Sbjct: 260 YFGSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIV 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 320 SITIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|313124003|ref|YP_004034262.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280566|gb|ADQ61285.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 377 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 7/247 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L+ + + S +L+ G + + + + F +I + Sbjct: 127 LESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGMIFAIY 186 Query: 177 FYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F DG I+ L +L K + G I A GL++ A Sbjct: 187 FLYDGQRIAAYWKRNLGTLLNKKVIRGIKIFLADADRAFSGYIRGQIIDAFIVGLLVSLA 246 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +A VP + +G++T + +IP PI + I A + + + + + Sbjct: 247 MLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAI 306 Query: 293 D-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L P L+ I + L ++ G G +G+ I + AL+ ++ I ++ Sbjct: 307 DGNILNPKLLSSAIHIHPLYVIVCVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAYRQK 366 Query: 352 NKEKISS 358 EK Sbjct: 367 QLEKSKE 373 >gi|217964433|ref|YP_002350111.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|217333703|gb|ACK39497.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|307571002|emb|CAR84181.1| membrane protein, putative [Listeria monocytogenes L99] Length = 345 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 115/361 (31%), Gaps = 26/361 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I + ++ +LV Sbjct: 65 VLLLYALIAVVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP G IS ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 Query: 358 S 358 Sbjct: 344 H 344 >gi|325685991|gb|EGD28052.1| permease [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 378 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 7/247 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L+ + + S +L+ G + + + + F +I + Sbjct: 128 LESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGMIFAIY 187 Query: 177 FYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F DG I+ L +L K + G I A GL++ A Sbjct: 188 FLYDGQRIAAYWKRNLGTLLNKKVIRGIKLFLADADRAFSGYIRGQIIDAFIVGLLVSLA 247 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +A VP + +G++T + +IP PI + I A + + + + + Sbjct: 248 MLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAI 307 Query: 293 D-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L P L+ I + L ++ G G +G+ I + AL+ ++ I ++ Sbjct: 308 DGNILNPKLLSSAIHIHPLYVIVCVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAYRQK 367 Query: 352 NKEKISS 358 EK Sbjct: 368 QLEKSKE 374 >gi|156743346|ref|YP_001433475.1| hypothetical protein Rcas_3407 [Roseiflexus castenholzii DSM 13941] gi|156234674|gb|ABU59457.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 407 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 115/356 (32%), Gaps = 20/356 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I I + + ++G P + A I + P+ + + Sbjct: 13 TVKLITIALIAALFFWLIRGLGNVLIPFVGAAITAYLFNPLITWLHRRARIGRA------ 66 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + L V + + Y + ++ + Q IP L + + Sbjct: 67 --IWIGLLYVVIGGIIYGLWRTLGPVIEREYSGLQAQIPHTLNLIQQELLLRDRIMVAGI 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L G IP + + L + +I F+ + I + Sbjct: 125 SVEVAPITEALREALADFGRR-IPEHVPHLVAVAFETLLLFVTYLIVTFYLLLEAPRIVE 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L + A + + + ++ G ++ + A L GV + LG+ Sbjct: 184 WLYELVPAPYRAEIRTLGSHIDHILAGYVRGTLMLIPIMATLTTIALTLLGVRYALVLGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRP 298 +T I+ +P P S ++I + + A + L + D + P Sbjct: 244 VTGILETLPLLGPWSAAGIAITVALFQMPAPWGWPAWLIAGSIGLTYFVLRMFEDNFIIP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +VG + L + F ++ G G GLF+ + A+ ++ + + ++ + Sbjct: 304 HVVGPAVHLHPMLVIFAILAGGALGGPFGLFVAIPVTAVARLLLRYLYYKLIDSPD 359 >gi|313899169|ref|ZP_07832690.1| putative membrane protein [Clostridium sp. HGF2] gi|312956038|gb|EFR37685.1| putative membrane protein [Clostridium sp. HGF2] Length = 365 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 116/322 (36%), Gaps = 27/322 (8%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PVL ++I F P+ + ++VM ++I L L + + + + Sbjct: 49 PVLMGIVIAFLLQPLIDRLQQHVSQK---------LAVMLVYIGIALVLAVFVIGMIPII 99 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +V+ + VP W+ + ++ +L+ L E +L+ I I Sbjct: 100 YKQVMDFAE---VVPVWMRHL------EGFLDRYHIAIGNLETLKEKYLQEGYIIVIDSL 150 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + + I FF D + + +L + + ++ Sbjct: 151 -----RNTMHTATNYGIAYITAFFISIDLDFWKRTAKKVIPNL--HQFSTFYLTMSNIVY 203 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 +G + + + +G ++ P+ + VI A++ + P GA ++I + Sbjct: 204 QYLVGTFLDILFIVVTVGITLYIFAFPNALLYAVILALLNLFPYVGATFGLILIAIVGAL 263 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 +F + I+ I ++P + + + + TF + G++G+ + Sbjct: 264 SYPVFPFLAFAIVWTIQQ-IESNFIQPMIFNRTMHVRPILTFVFIFLSEALFGVVGVILS 322 Query: 332 PVLMALIAVIWKESIMAIKENK 353 P+ A+ + ++ + + +K Sbjct: 323 PIFAAIAQIAFRSWLHSKTSDK 344 >gi|294501351|ref|YP_003565051.1| putative permease [Bacillus megaterium QM B1551] gi|295706698|ref|YP_003599773.1| hypothetical protein BMD_4599 [Bacillus megaterium DSM 319] gi|294351288|gb|ADE71617.1| putative permease [Bacillus megaterium QM B1551] gi|294804357|gb|ADF41423.1| putative membrane protein [Bacillus megaterium DSM 319] Length = 353 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 113/324 (34%), Gaps = 17/324 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ L +Y P A I + P+ K ++++ ++I+ Sbjct: 30 FLWLPVIYMFLKALLPFFIAAFITYLLHPLIEKTHDKGVPRP--------LAILLIYIIF 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + V +V N+ W + + S P + Sbjct: 82 FGGIGFGAYKSYPIFVEQVKDLNEQLPHFTNTYRH-----WVESIHDRTTSLPNGVHEKI 136 Query: 138 ETFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 E + + ++ + A + L +I + +F+ +D SI + + Sbjct: 137 EGSIDDVEATLNVWLTKVAEGL-KSLITSFLILIIIPFIVFYMLKDFSSIKKATAYVTPK 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ V + + + G + + G++ +A W VP + LG I + +I Sbjct: 196 KWHKPGERFLSDVNESLGNYIRGQFFVCLIIGVIATAALWFFHVPYALLLGFIIGVTNII 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI + + +I + + + F+ L P +VG + + L Sbjct: 256 PYFGPIIGAVPAAIIAATISIKLVITIVIIIFVLQFLEGNVLSPLIVGKSLHIHPLFIML 315 Query: 315 GLVGGVRTMGLLGLFIGPVLMALI 338 L+ G G+LGL + ++A+I Sbjct: 316 ALLLGGEFGGVLGLILAVPILAVI 339 >gi|238020124|ref|ZP_04600550.1| hypothetical protein VEIDISOL_02008 [Veillonella dispar ATCC 17748] gi|237863648|gb|EEP64938.1| hypothetical protein VEIDISOL_02008 [Veillonella dispar ATCC 17748] Length = 373 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 113/335 (33%), Gaps = 11/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 F P++ I F + + L+++ + + + + + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKSKTGWKDKIRRPLSLVLSFVTISAIVYFIARM 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ V + Q W+ + + T + + Sbjct: 101 AIPQLIHSMSII--VASSPQLYTDFQTWMQHFTETIPMASNQTLMDTLSGESVVKYTREW 158 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T G ++ L+ L +IF I L R + L + + Sbjct: 159 GTKGGTYLVNAMGTALSWTLNIGLGLIFAIYMLLDKERLMMQGKRILKAYASDEWVNRVS 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++R+ + + F+G I A+ G+++G + W + + + + A++P Sbjct: 219 YVTRVAVQTFSNFFVGQFIDALILGIMVGISLWAFNIEYATTIACVIGLTALVPLLGIYV 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 279 GGVIGAVILLTVSPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ IG L+A + + + E + Sbjct: 339 LMGVTGMLIGVPLVATCYKLLMTDVNDRLASNEGL 373 >gi|209695807|ref|YP_002263737.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009760|emb|CAQ80066.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 355 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 123/340 (36%), Gaps = 14/340 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ + +++YF AP+L A+++ + WP+ +SK T + Sbjct: 15 DPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAK--LSKFGLPRTLAVMF 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ + + LS +P Sbjct: 73 VVLLFISLMLLAVFGLVPTIWNQVGNLINDIPSMFNG---LHSLLSSLPDRYPEFIQPQS 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +++ +T + S + +I + + +FF +D + Sbjct: 130 IDTLLDTVRGKVLGMGETMVKGSLSSLIS-----LAALGVYLILVPLLVFFLLKDKDEMV 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ K+ + + I + G + + G V + +++ + + L Sbjct: 185 RTMSNILPK-NRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYALLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA ++I L + + L L AI + L P L Sbjct: 244 VMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G G+F L L+ +WK Sbjct: 304 AVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWK 343 >gi|260912796|ref|ZP_05919282.1| PerM family permease [Pasteurella dagmatis ATCC 43325] gi|260633174|gb|EEX51339.1| PerM family permease [Pasteurella dagmatis ATCC 43325] Length = 355 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 115/342 (33%), Gaps = 13/342 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + + I+ +S+YF AP+L A+++ + WPI K + + Sbjct: 15 DPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPI-RFLTDKLKFPRLLSTAL 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L +V +L L + LVS + + WL +P + Sbjct: 74 IFGGFLSLILVIVLVLIPTLWTQTVNLVSDLPHMFNT---INVWLLSLPEHYPELVDYQT 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S+K F ++ + S + + + ++ FF +D + Sbjct: 131 IDSVLNSVKAKILGFGESALKFSLTSLLSLVTLGIYAFLVPLMV-----FFLLKDKKELM 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + I + G I V + + G+ + L Sbjct: 186 TGVSRFLPK-NRTLASNVWQEMQQQIANYIRGKLFEIIIVTAVTYAIFLFFGLNYSLLLA 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V + ++P GA + V++ + I L I ++D L PFL Sbjct: 245 VAVGLSVLVPYIGAVLVTIPVALVAAAQFGISPTFWYILIAYIVSQLLDGNLLVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L L ++ G G+F L L+ + Sbjct: 305 AVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAW 346 >gi|251798577|ref|YP_003013308.1| sporulation integral membrane protein YtvI [Paenibacillus sp. JDR-2] gi|247546203|gb|ACT03222.1| sporulation integral membrane protein YtvI [Paenibacillus sp. JDR-2] Length = 343 Score = 76.4 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 120/319 (37%), Gaps = 4/319 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP L AL++ P+ I + + + + I++ + I + L + E+ Sbjct: 24 APFLLALVVAIFLEPLTQFLIRRLKTNRLVASTISSSLFTVILIGLMALLGVKVVAELIA 83 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 KV L + ++A+ L +S++ G + Sbjct: 84 FAQKVPNYVGDASTYVTDLVENARSLYANFSPDTVGQIENWLTDMSKSLTGMVGS--LSS 141 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F + I ++A++ F ++ +L E ++ + K I Sbjct: 142 SVISFASGIPSMFIFFIVFLVAVYMFGFSLNTMKDTFLTLFEEKSRPQVNEVLDNLKKSI 201 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 I++ ++ + + +A+ ++ I+ ++P G YL+ Sbjct: 202 FGFLRSQIILSALTYILSLIGLIILDIKYPLAIALLIVIVDIMPILGTGTVLVPWGTYLV 261 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G+++ L++ + + + + + P ++G + + L L G + +G++G+F+ Sbjct: 262 ITGDLYAGIGLYIL-FLFMTVFRRIVEPKILGDSVGIGSLSALISLYVGFKLVGVIGVFL 320 Query: 331 GPVLMALIAVIWKESIMAI 349 GP+++ + I K + I Sbjct: 321 GPLVVIIYMAIRKAGLFKI 339 >gi|152996109|ref|YP_001340944.1| hypothetical protein Mmwyl1_2087 [Marinomonas sp. MWYL1] gi|150837033|gb|ABR71009.1| protein of unknown function UPF0118 [Marinomonas sp. MWYL1] Length = 353 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 113/346 (32%), Gaps = 22/346 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-----TF 61 N + ++ +++ L L F G AP+L A+++ F + + F Sbjct: 15 NEEVVVFLLLLIATLCVLAFWGGILAPILIAIVLAFLLQGLVDRLQRLRLGHLPSVFIVF 74 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + T SV +VP+++ ++ V V A + + + + G Sbjct: 75 FTFLTTCSVFIGVMVPIIW---------RQAVRLVQDAPRMFMVIRNEVQQFAEGHSDLV 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 SL S TN ++ F+ + ++ + + +FF +D Sbjct: 126 SQAAIDEVTNSLANES-----TNLGQWLLSFSLSSIPSLFSVVIYVVLVPLVIFFLLKDQ 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L S + I+ + I + G I G+V + + G+ Sbjct: 181 DKILTYLTSWLPK-ERKMMRNIAHEMNGQIANYIRGKFIEMFVVGVVTYVVFLVFGLKYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + +IP GA V + + G + + I + L P Sbjct: 240 ELLALLVGLSVLIPYIGAAAVTIPVVLVAFYQYGTQSEFIYVVVAYLIVQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L L ++ G G+F L L+ I Sbjct: 300 LFSEAVNLHPLAIIVAVLFFGGIWGFWGIFFAIPLATLVKAIINAW 345 >gi|329121018|ref|ZP_08249649.1| protein of hypothetical function UPF0118 [Dialister micraerophilus DSM 19965] gi|327471180|gb|EGF16634.1| protein of hypothetical function UPF0118 [Dialister micraerophilus DSM 19965] Length = 347 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 78/196 (39%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + +F+ L +I + F+F + G SL + + + Sbjct: 144 LAQFSISAVFSVASTLLELIVVPFITFYFMKKGSVFKDLFISLFPERYSNRLNILFSEIY 203 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V+ + G ++++ + + + +P + +G++ ++ MIP PI I Sbjct: 204 NVLHAYIRGQLLLSVIMTIFVCIGMSMFDIPYPLVIGLLAGVLEMIPIVGPIIGALPPIV 263 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + A + ++ + + P L+G IK+ + G++ G + G++G+ Sbjct: 264 LGLLQGTSTAIQVTIFYIFVQQLDAHLIMPKLMGSIIKVHPIVIIAGVLIGGQLYGVIGM 323 Query: 329 FIGPVLMALIAVIWKE 344 + +A++ ++ + Sbjct: 324 MVSVPFIAVLQIVLRH 339 >gi|317507941|ref|ZP_07965636.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974] gi|316253752|gb|EFV13127.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974] Length = 382 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 65/194 (33%), Gaps = 1/194 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I ++ + L FF DG I L L + Sbjct: 162 IAGGVFSTASALVEGVTGFFLTLFTLIFFLSDGQEIWYYLTKLVPEPARDRVRAAGGAGY 221 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + G ++A + + +G VP + L + + A IP + V++ Sbjct: 222 RTLTGYVKGTALVAAADAIGIGIGLAALRVPLALPLASLVFLGAFIPVVGSLVAGLVAVL 281 Query: 269 L-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + L+ A + + L+P ++G +K+ L + GV G++G Sbjct: 282 VALVTQGPVVALLTIALLVGVMQLESHVLQPLVLGRAVKVHPLAVILAIATGVVLAGIVG 341 Query: 328 LFIGPVLMALIAVI 341 + L+A++ Sbjct: 342 ALLAVPLVAVLNTF 355 >gi|15675097|ref|NP_269271.1| hypothetical protein SPy_1117 [Streptococcus pyogenes M1 GAS] gi|28895889|ref|NP_802239.1| hypothetical protein SPs0977 [Streptococcus pyogenes SSI-1] gi|71903480|ref|YP_280283.1| hypothetical protein M28_Spy0815 [Streptococcus pyogenes MGAS6180] gi|94988588|ref|YP_596689.1| hypothetical protein MGAS9429_Spy0958 [Streptococcus pyogenes MGAS9429] gi|94992411|ref|YP_600510.1| hypothetical protein MGAS2096_Spy0914 [Streptococcus pyogenes MGAS2096] gi|94994386|ref|YP_602484.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] gi|13622254|gb|AAK33992.1| hypothetical protein SPy_1117 [Streptococcus pyogenes M1 GAS] gi|28811139|dbj|BAC64072.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|71802575|gb|AAX71928.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS6180] gi|94542096|gb|ABF32145.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS9429] gi|94545919|gb|ABF35966.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS2096] gi|94547894|gb|ABF37940.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] Length = 382 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 113/296 (38%), Gaps = 8/296 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + ++ +S + + I ++++ + Sbjct: 87 ICLLLAYLTFFILITWIISIVIPDLITSISTLTKFDTITIQ--EVVNNLEHNKLLARTIQ 144 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 ++ L + + F+ + + + +++ + + Sbjct: 145 -YIGGDGKLTETIANYSQQLLKQFLTVLTNILTSVTVIASAIINLFISFVFSLYVLASKE 203 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q ++L + Y K+I ++ + F+ T+ A+ G + S ++ +P Sbjct: 204 DLCRQGNTLVDTYTGKYAKRIHYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLP 263 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 264 FAGTIGVLVAFTALIPVIGASIGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPK 323 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VGG I LP + + G G++G+ I L A + + K++I + ++K Sbjct: 324 VVGGSIGLPAMWVLMAITIGASLKGIVGMIIAVPLAATLYQVIKDNIQKRQAIQKK 379 >gi|330431381|gb|AEC16440.1| putative transport protein [Gallibacterium anatis UMN179] Length = 353 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 108/342 (31%), Gaps = 11/342 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + ++ I+ V YF F P+L A+++ + ++ + Sbjct: 10 RRRFSDPQAAGLFSLLLIVCVGFYFFSDLFTPLLIAIVLAYLLELPIQYLTTRFKFPHLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + + + L+ + + + +W+ +P Sbjct: 70 ALALVLGGFIAAVLFVFIVMIPTLWNQTVNLLKDLPTMSN---QLHQWVLSLPENYPEYV 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L+ F ++ + S + + + ++ FF +D Sbjct: 127 DYAMIDTVFNGLREKILGFGESALRYSLTSIVSLVTLGIYAFLVPLMV-----FFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ + + I + G + + V + + + Sbjct: 182 NYLISGVSRFLPK-NRQLVNQVWDEMKQQIANYIRGKVVEIVVVTAVSYVTFLIFKLNYS 240 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPF 299 + L V + ++P GA + +++ L + L L I + L P Sbjct: 241 LLLAVAIGLSVLVPYVGAVLVTIPLALVALFQFGWSATFGYLMLVYTITQILDGNLLVPL 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + L L ++ G G+F L L+ I Sbjct: 301 LFSEAVNLHPLVIIVSVIFFGGLWGFWGVFFAIPLATLVKAI 342 >gi|160946181|ref|ZP_02093392.1| hypothetical protein PEPMIC_00143 [Parvimonas micra ATCC 33270] gi|158447704|gb|EDP24699.1| hypothetical protein PEPMIC_00143 [Parvimonas micra ATCC 33270] Length = 394 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 106/289 (36%), Gaps = 9/289 (3%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTK 125 +++ + + F+ + + S + + ++ I + + + EL ++ Sbjct: 87 MSAIIITYFIFFTFIILLLKYIIPQFYSNIKMFVDRTPIFIDMGVEKAKYMLQNVELSSE 146 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S TF T D IP + + F + L+II II + D + S Sbjct: 147 IRSFINGKLTEFATFSTTFLTDMIP-WVATFATRVVSLFLNIILAIIISGYLLYDKENFS 205 Query: 186 QQLDSLGEHLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L +FP +I+ + ++S L I AI G+ + Sbjct: 206 RILKKFMIAVFPEKANRITFKIVKRFDYTLKSYLLAKGIGAIIVGITFYIILLFMKIDYA 265 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPF 299 + I +IP G + ++I LL + FN F+ + + ++D + P Sbjct: 266 LLFAFILGFTNLIPWFGCYLGAIPIAIVLLFT-STFNTVLWFMIIVVIVSMIDANVISPR 324 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G + + F LV G G++G + + +I KE I A Sbjct: 325 VSGKSLGISSFWVIFALVLGGSLFGIIGFLLSVPVFVVIYTTLKEYIEA 373 >gi|269956268|ref|YP_003326057.1| hypothetical protein Xcel_1468 [Xylanimonas cellulosilytica DSM 15894] gi|269304949|gb|ACZ30499.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 368 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 98/298 (32%), Gaps = 13/298 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F V AL++ P+ F F + ++ + + + ++ + + Sbjct: 42 FIAVFLALVLTSVLRPLTDWFARVVP--RPFAIGLTFLTALIVVGGLVTYVVASVAGQWQ 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L + I WL+ P + S + ++ N D Sbjct: 100 TLGEEFTDGVDQII---GWLATGPLRLDISP------EAFTDALEAARQWIADNAADVAG 150 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + A G + + + + I FF G ++ + + W + + Sbjct: 151 QTAQTVGTVVEAFAV-VALAIFCTVFFLLQGGAMWRWFLTQVPAGHRDRWDGAATAGWET 209 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 G IIA+ GL+ G + G+P L V+ I IP GAP + + Sbjct: 210 FAGYARGTVIIALTNGLMAGVFLAILGIPLAAPLAVLVFIGTFIPLIGAPAAMVIAGVVA 269 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L A + L A+ I L+P ++G + L + + G G+LG Sbjct: 270 LAAEGPVKALIVILGVALIGQIEGHLLQPLIMGKQVALHPVIVAVAIATGTVLAGILG 327 >gi|116334605|ref|YP_796132.1| permease [Lactobacillus brevis ATCC 367] gi|116099952|gb|ABJ65101.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 363 Score = 76.4 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 108/338 (31%), Gaps = 31/338 (9%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R+ ++ +I+ L+ ++ +L I F + + + Sbjct: 15 RFTVLALIIFVLWLIRAEMNMILLTFIFTF----LVLQLVKAVRRVVKLPPALIVTVTYV 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I L + + ++ S I G + + ++ Sbjct: 71 VIIGLLYWAVTTYLPQILT-------------------SSIHGIENLYKFYQDPKNNSNE 111 Query: 133 LKILSETFLKT----NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++KT N + + + + +++ +I FFF + ++ Sbjct: 112 IISYVTNYIKTSDIVNQLQNGAKLVLTYVSTIGSFGVTLFMSMILSFFFTIESKQMAAFS 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +++ I+ K + + IA+ ++ + +P L Sbjct: 172 KRFLTSTYGWFFEDINFFATKFVNTFGVVLEAQFFIALCNTVITTIVLAIMQMPQLPTLA 231 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I+++IP I ++I G + + + + L P + Sbjct: 232 IMIFILSLIPVAGVIVSIIPLAILGYSVGGFRYIVYILVMIVVVHALEAYVLNPKFMSSR 291 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G + G+ GL +G + I Sbjct: 292 TELPIFYTFVVLLAGEQLFGVWGLIVGVPIFTFFLDIL 329 >gi|111022838|ref|YP_705810.1| hypothetical protein RHA1_ro05875 [Rhodococcus jostii RHA1] gi|110822368|gb|ABG97652.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 403 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 97/289 (33%), Gaps = 14/289 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP + ++ + A + V + + + + + + EL +K Sbjct: 70 VLWPPTRAMTRRRIPPAAAAAT-SLVVFIAVVAGIIAGIVPSVVNQAPELANKATQGIN- 127 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 V WL P + I + I Sbjct: 128 --QVQDWLKGPPINLQ---------DDQIDQGIHTIVVKVQESGTVIASGVFTGVSTASS 176 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 L++ +++ FFF +DG L S+G + + + + + +++ Sbjct: 177 LLLTLGLVLVLSFFFIKDGPRFIPWLHSVGGGRAGRHLEVVLGRMWDTLGGFIRTQALVS 236 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL 281 + + + +G+ + GVP L ++T I +P GA ++ + L+ + A + Sbjct: 237 LIDAVFIGAGLLILGVPLAPVLAILTFIGGFVPIVGAFVAGALAVLVALVANGLTTAVIV 296 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + I L+P L +KL + + G G++G F+ Sbjct: 297 LIIILVVQQIEGNVLQPVLQSKSMKLHAVVVLLAVTAGGSVFGIVGAFL 345 >gi|229086953|ref|ZP_04219110.1| hypothetical protein bcere0022_35260 [Bacillus cereus Rock3-44] gi|228696329|gb|EEL49157.1| hypothetical protein bcere0022_35260 [Bacillus cereus Rock3-44] Length = 335 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 116/318 (36%), Gaps = 11/318 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ K P A I + P+ + T++++ ++I+ + Y Sbjct: 19 IFVFKVAITPFFIACFIAYLLHPLIEKLHKEGMPR--------TLAILLIYILFFGGIGY 70 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++S++ N+ P+++ M T + K+ Sbjct: 71 GIYKGTPVVISQLQEINK---QFPQFMKMYDSWMDGVTQQTDNFPSFIHEKVKQIFAGIE 127 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I + LD L I + +F+ +D + + + + + + Sbjct: 128 MKIQTLLDKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKMVPNKWRSTGQVL 187 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + K + S G + + G V A+W G+ + LG+I + +IP P+ Sbjct: 188 AKEIDKSLGSYIRGQLFVCLVLGGVSVLAFWFIGMKYPLLLGIIVGVTDIIPYFGPVLGA 247 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 248 IPALMIAATISTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEIG 307 Query: 324 GLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 308 GIVGLLIAVPILAVIRTV 325 >gi|319937594|ref|ZP_08011999.1| hypothetical protein HMPREF9488_02835 [Coprobacillus sp. 29_1] gi|319807434|gb|EFW04043.1| hypothetical protein HMPREF9488_02835 [Coprobacillus sp. 29_1] Length = 404 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 99/302 (32%), Gaps = 3/302 (0%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + + + + I+ + F+ + + +L+S + + + + Sbjct: 79 RGARGIAITLTIIFALIVLILIVSFILPKVIESLAQLLSNMGNLLKGIVTSIDEVFIWLN 138 Query: 116 GMWASE---LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + E ++ P + + + + + A F F + ++ +F + Sbjct: 139 IDYRVENIVQIDNIVNMPWNDIFKNVINFLASSANGLLDNAVTFTGTFFVWFMAFMFSLY 198 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L R + + + ++ G A G++ Sbjct: 199 ILSGKERLLSQLRKVFIVFLREERAMALFDYGHQANVIFKNFITGQLTEACIIGIIYYIG 258 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G P + +I A+ +++P PIS + +L++ + ++ + I Sbjct: 259 MIFFGFPYPELIAMIIAVFSLVPVFGPISAMIIGAFLVMSQDFVTMIWFIVFFQVLSQIE 318 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D + P +VG + LP L + GL+G+ L A ++ I + + Sbjct: 319 DNLIYPRIVGKSVGLPGLWVMLSIFILGDLFGLVGMITAVPLTAFAYTLFGRWIHNVLKR 378 Query: 353 KE 354 + Sbjct: 379 RH 380 >gi|308174610|ref|YP_003921315.1| permease [Bacillus amyloliquefaciens DSM 7] gi|307607474|emb|CBI43845.1| putative permease [Bacillus amyloliquefaciens DSM 7] gi|328554535|gb|AEB25027.1| permease [Bacillus amyloliquefaciens TA208] gi|328912939|gb|AEB64535.1| putative permease [Bacillus amyloliquefaciens LL3] Length = 371 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 2/197 (1%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + ++ + +F ++A FF +D + L S+ A K +S Sbjct: 158 LSHLLELVPKWIAFLPNTAAVFVFAMLATFFMTKDWHKLKALLYSILPERVSANAKAVSG 217 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + K + ++ + +++ +L G+ + ++ ++P GA F Sbjct: 218 ELKKAMAGFIKAQAVLILFTMIIVFIGLFLLGIEHAATIAFFIGLVDLLPYLGAGSVFVP 277 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +YL I G + A L + I + I + P ++ I L L T L G + G Sbjct: 278 WIMYLAIAGQLPQAIGLGILY-IVVLIQRQLTEPKILSKSIGLDPLATLIALFAGFKLFG 336 Query: 325 LLGLFIGPVLMALIAVI 341 +LGL GP L+ I Sbjct: 337 ILGLAAGPALLVFIQAF 353 >gi|302380888|ref|ZP_07269350.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] gi|303234851|ref|ZP_07321476.1| putative membrane protein [Finegoldia magna BVS033A4] gi|302311266|gb|EFK93285.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] gi|302493969|gb|EFL53750.1| putative membrane protein [Finegoldia magna BVS033A4] Length = 381 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 108/332 (32%), Gaps = 4/332 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F A ++ I + + K I+ + + + L F+ Sbjct: 44 IISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLKRAISLLISLVIVSAILTFVVTLI 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ + R +I T ++ L + + +L NG Sbjct: 104 IPNFLEAIKSLIQGIPVLVEKLRKYPEI-AKQLDKIYDTYAITSTHDLFVKLKPYLTKNG 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS- 204 +D + +F ++ A++ + Q + K+I Sbjct: 163 LDILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFSGKTAKRIIV 222 Query: 205 --RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ + S F G I A G + +L +P+ + V+ A+IP I Sbjct: 223 FFKVAYEKFYSFFKGQFIEAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILG 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A+ +++ + A ++ + P +VG + LP + + G Sbjct: 283 AALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLVAVTIGAAV 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ I + A I + E+K Sbjct: 343 SGIVGMLIFVPIFATIYELLYRYKKKKLEDKN 374 >gi|225376543|ref|ZP_03753764.1| hypothetical protein ROSEINA2194_02185 [Roseburia inulinivorans DSM 16841] gi|225211580|gb|EEG93934.1| hypothetical protein ROSEINA2194_02185 [Roseburia inulinivorans DSM 16841] Length = 457 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 110/336 (32%), Gaps = 25/336 (7%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEE---------------SSTFLAVIATVSVM 71 L PV+ L++ + P+ K S A + ++ Sbjct: 73 LTYILQPVIIGLVVAYLLNPLMKLIDGKLFSLFKGKMKSEKKAKKISRGLAIAGALLFLV 132 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK--HLSH 129 + ++ + + + ++ ++S + + + W++DI G + Sbjct: 133 GIIVLLIAAIVPSIIQSIQGIISTLPAEVRSLV---DWINDIAKGDSQIADIAEEVITQA 189 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-- 187 + + L +I S + + ++I+ +I + + Q Sbjct: 190 GNFFENWMKNTLLPQAEVYISSITSGVITG-VKFVINILVGLIISVYVMASQEKFAGQAK 248 Query: 188 --LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ + + + R ++ G + + G++ + +P + + Sbjct: 249 KIIYAIFKPVRANVVVETVRKSNEIFGGFISGKILDSAIIGVIAYIVLAIMKMPDTMLVA 308 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + +IP P S +++ N ++ I + + P ++G Sbjct: 309 VIIGVTNIIPFFGPFIGAIPSFIIIVLQNPVQGLYFLIFVIILQQVDGNIIGPKILGDST 368 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F ++ G G+ +G +MA+I I Sbjct: 369 GLSSFWVVFAILVFGGLWGFPGMLLGVPIMAVIYYI 404 >gi|254440895|ref|ZP_05054388.1| conserved domain protein, putative [Octadecabacter antarcticus 307] gi|198250973|gb|EDY75288.1| conserved domain protein, putative [Octadecabacter antarcticus 307] Length = 375 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 128/367 (34%), Gaps = 22/367 (5%) Query: 5 MLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + W I + V L + L P + +I + PI S Sbjct: 3 LPSQKEFQYWGIAAAVFVFLLWALGAVLTPFILGSVIAYFLDPIADRL-QIWGLSRVMAT 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ T+S + F + L + + ++ +L+S + + Q L + G + + Sbjct: 62 IVITLSGILTFFLLFLLVVPTLIGQLGQLISTIGVIIQDLPQTWTSLKEWLSGRFPN--L 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ G D + S ++ + ++ + + F+ D Sbjct: 120 DLDGTFMLDQMTSLGNAVQSRGGDLVAALLSS-AQGIINVVVLLVIVPVVTFYMLLDWDR 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q+D+L + ++R + + + S G + + G A +AG+ + Sbjct: 179 MVAQVDNLLPLDHQETVRDLARQIDRTLASFIRGQGTVCLILGTYYAIALMIAGLNFGLI 238 Query: 244 LGVITAIMAMIPGGAPIS----FTAVSIYLLIKG-------------NIFNATCLFLWGA 286 +G I +++ IP + ++++ G N + A Sbjct: 239 VGFIAGLISFIPYIGALVGGVLAIGLALFQWWGGTAVIDGEIVQHGINWLRIGIVAGVFA 298 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F L P LVG + L + L +G +G+ + + A+I V+ + I Sbjct: 299 FGQFFEGNILTPKLVGSSVGLHPVWLILALSVFGSLLGFVGMLVAVPVAAVIGVVTRFLI 358 Query: 347 MAIKENK 353 K + Sbjct: 359 AEYKSGQ 365 >gi|293376003|ref|ZP_06622261.1| putative membrane protein [Turicibacter sanguinis PC909] gi|292645380|gb|EFF63432.1| putative membrane protein [Turicibacter sanguinis PC909] Length = 382 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 117/334 (35%), Gaps = 18/334 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESSTFLAVIATVSVMC 72 +I+ ++ PV+ A I + W KK + + + Sbjct: 36 LIIAAIKEFMAVITPVIIAFAIAYILWKPTVFVEKNLQKMTKKLMKRDLSSGASRGISLL 95 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ L + + + IP + ++ S Sbjct: 96 IVVSLVVMLILLLFNTIIPPIITNLKLLVDSIPAL----HQTFNKYIDDISPYIQSFITE 151 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFL----DYCLSIIFMIIALFFFYRDGFSISQQL 188 +I T TN +++I +FG + + +S++ II +F +D ++++ + Sbjct: 152 EQINEITRAITNLLNYIATQILQFGTGMITNMTGFIISVLTTIILSIYFLKDKETLTRSV 211 Query: 189 DSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 G+ L ++ + + V + I AI G+ G P + + Sbjct: 212 YKAGQTLLTPNGLKRSQQFLKDLDAVFGGFLIAQLIAAILAGIFSSLILIAIGHPFALLV 271 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + +IP PI + L + ++ A + I + ++P L+ Sbjct: 272 GLVTGVANVIPYVGPILGAVLGGLLGLFSSLKMAILSLVLLTIYQQLDANVIQPKLLSNS 331 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L + ++ G +G+LG+ + AL Sbjct: 332 VGLNPVWVLIAILIGGHYLGMLGMIVSIPSAALF 365 >gi|218129150|ref|ZP_03457954.1| hypothetical protein BACEGG_00725 [Bacteroides eggerthii DSM 20697] gi|217988669|gb|EEC54988.1| hypothetical protein BACEGG_00725 [Bacteroides eggerthii DSM 20697] Length = 376 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 130/364 (35%), Gaps = 19/364 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R +I+ +I++ L L P A +I + +P+ + F K + Sbjct: 1 MERKKITFDSFIRGVILGVIIIGLLMLLKRLSSVLLPFFIAWLIAYLVYPLVTLFQYKLK 60 Query: 57 ESSTFLAVIATVSVMCLF-IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + +++ + + + L + E + + ++ HG + + Sbjct: 61 FKNRIVSIFCALFTILIIGAGAFYLLVPPMIQEFGRVQALLIQYFSHGTYNSNVPTSL-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 SE ++ ++ ++ L + +PR S +I L+ Sbjct: 119 ----SEFLRDNIDAKFITELFNKENLLDALKEAVPRLWSLLSDSIDLLFSVFTIFLILLY 174 Query: 176 --FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F D SI++ L + + I + + F G +A+ G++ + Sbjct: 175 VIFILLDYESIAEGWTHLVPIKYRPFTISILNDIKTGMNRYFRGQAFVALCVGILFSIGF 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIV 292 + P + LG+ + M+P I F + ++K + + + AI +FI+ Sbjct: 235 LIIDFPLAIGLGLFIGALNMVPYLQVIGFVPTIVLAILKASDTGGNFWIIIASAIAVFII 294 Query: 293 -----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 D + P ++G L L MG+LG+ I L L+ ++ I+ Sbjct: 295 VQAIQDGFIVPRVMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII 354 Query: 348 AIKE 351 + Sbjct: 355 NKEN 358 >gi|295134599|ref|YP_003585275.1| hypothetical protein ZPR_2757 [Zunongwangia profunda SM-A87] gi|294982614|gb|ADF53079.1| membrane protein, UPF0118 [Zunongwangia profunda SM-A87] Length = 362 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 127/343 (37%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++L LY ++ + A II P+ + + + +I + V+ +F+ Sbjct: 20 IMLMLFFLYEIQSVIVYIAVAAIISLIGRPVVIFLRQRLKIPNQIAVIIVLLLVLAIFVG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L + + + L I + + SD+ + + Sbjct: 80 IILVFVPIVIEQSQYL---------GRIDIEAFKSDLNDLNGQINDYLGVEEINIIESLK 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F+++ + IP+F + I +++ +I FF +D + + Sbjct: 131 ESQFIRSLDVSLIPKFLNNVFGILGATIVALFSVIFISFFLLKDSKLMLNSILVFANRGK 190 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + ++ F+G+T+ ++ L V + VA+ I A + ++P Sbjct: 191 EQKFVRVFNKIKILLSRYFVGLTMQITVLFILYMILLTLFEVNNPVAIAFICAFLNLVPY 250 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCL-----FLWGAIELFIVDKTL-RPFLVGGPIKL 307 P+ + +I G F A L + G ++D + +P + G +K Sbjct: 251 LGPVFAGILMALFVISSNLGADFQAIILPKLIYVMLGYAICQVIDNLISQPMIFGASVKS 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G++G+ + + I VI KES+ K Sbjct: 311 HPLEIFLIILIAGLVFGIVGMVVAVPVYTAIKVIAKESLSDYK 353 >gi|205375165|ref|ZP_03227956.1| hypothetical protein Bcoam_19347 [Bacillus coahuilensis m4-4] Length = 361 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 109/324 (33%), Gaps = 9/324 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK F P + A I+ + P+ +K + V ++ + + Sbjct: 32 FIFTPIVVLLKTIFLPFILAGILFYLCRPLVRFLEKQKVPKGIAIIVAYIAIILAFYGI- 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + ++ V + ++ D + E +S ++ + + Sbjct: 91 FKLIGPVVNDQIDRFVKNFPKMQEAVEESVTYVQD--NWEYLPESVRDMVSFDKAAE-RA 147 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++F DF+ ++ + LF+ +DG + + Sbjct: 148 QSFFTGFASDFV-----SILTNIFSTVFVLVLVPFILFYMLKDGNRLGNFIALFFPAHKR 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K + + K I S G ++++ G +L Y + G+ + L + + +IP Sbjct: 203 EDVKGVLGAMDKTISSYIQGQVLVSVCVGTLLLIGYLIIGLDYSLVLALFGMLTNVIPFI 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + + + + I I + P ++G + + L ++ Sbjct: 263 GPFIAVVPALLVALFQDPIMVVYVAIIMIIAQQIEGNIISPQVMGKTLDIHPLTIIVLIL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 +G LG+ A++ + Sbjct: 323 FAGNLVGFLGIIFVIPTYAVVKTV 346 >gi|17228745|ref|NP_485293.1| hypothetical protein alr1250 [Nostoc sp. PCC 7120] gi|17130597|dbj|BAB73207.1| alr1250 [Nostoc sp. PCC 7120] Length = 362 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 114/309 (36%), Gaps = 16/309 (5%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A I+ F + F + + T VI + + LF + + L + + +L++K+ Sbjct: 44 AAILAFLLNYL-VKFFERARITRTQAVVIVLLVTLTLFGILTVTLVPMLIDQTVQLLNKI 102 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT--NGIDFIPRFAS 154 P WL+ + E + K P L++LS + + + + A Sbjct: 103 ----------PDWLTASQANLEHFERFAKQRRLPLDLRVLSNQINASIQSVVQQLASGAV 152 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 L L+ I +++ F+ G + L +L K ++ ++ Sbjct: 153 GLAGTLLSGLLNFILVVVLAFYMLIYGDRVWYGLINLLPSKIRFPLTKSLQLN---FQNF 209 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 FL ++ + + L + + VP + ++ I +IP + L++ N Sbjct: 210 FLSQLLLGLFMIVALTPIFLILKVPFALLFAILIGISQLIPFIGATLGIGLVTILVLLQN 269 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + A + + I I D L P L+G I L + F ++ G GLLG + + Sbjct: 270 WWLAVQVAIAAIIMQQIKDNLLSPRLLGNFIGLNPIWIFVAILMGYEIAGLLGTLVAVPI 329 Query: 335 MALIAVIWK 343 I + Sbjct: 330 AGTIKGTFD 338 >gi|256618945|ref|ZP_05475791.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256598472|gb|EEU17648.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 350 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 119/358 (33%), Gaps = 23/358 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + R+ ++ +I+ LY + +L I + + + + + + ++ Sbjct: 8 IQNERLRRFCVLALIIFVLYLSRSMITTILLTFIFTYLAVRLVHFVQRYMKIPTIVIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ L + + + + ++++ VV Q + Sbjct: 68 TYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQSPHTDTNQVLQFIDQYLEKSNLLS 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L + S+ I R+ G + L + +S I FFF + ++ Sbjct: 128 QLQNGASM---------------ILRYIQDIGAVGLSFVMSFILS----FFFMIEKKKMA 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + F +++ I K + + IA+ ++ A + G Sbjct: 169 DFSKLFLKSDFDWFFQDIYYFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLP 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I++++P I +S +G + + + I L P + Sbjct: 229 SLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ R G+ GL +G + + K + + + N Sbjct: 289 SSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 346 >gi|256395660|ref|YP_003117224.1| hypothetical protein Caci_6535 [Catenulispora acidiphila DSM 44928] gi|256361886|gb|ACU75383.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 394 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 88/282 (31%), Gaps = 6/282 (2%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L + L + + +++ + +P WL +I K Sbjct: 117 AVVLVGFTAVLGGFLALVIPPVSNEITALTKE---IPTWLQEI---HDHHSQLGKIEDRY 170 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + F + + G I + S +I +F ++ Sbjct: 171 HLVAKAKAQFASGDASGKLVSGLLTAGQIIVGAVTSTFIVITLTIYFLVGMPAVRDFGLR 230 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + L + GL GVP LG + AI Sbjct: 231 FVSARNRPRSADLTNQILLQVGRYMLANLATSALAGLATFIWCMAVGVPYAAVLGFLVAI 290 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 M M+P A + + ++ A ++ + F D + P + +++ + Sbjct: 291 MDMVPVIGSTVGGAAVSLVALSVSVPTAVASLVFYTLFRFAEDHLINPLTMKYTVRIHPI 350 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T ++ MGL+G I I++I +E + ++ Sbjct: 351 ATMIAVLVMGTLMGLVGALIAVPTATAISLILQEVVFPKRDQ 392 >gi|300112910|ref|YP_003759485.1| hypothetical protein Nwat_0191 [Nitrosococcus watsonii C-113] gi|299538847|gb|ADJ27164.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 356 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 112/356 (31%), Gaps = 20/356 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ + +++ + +++ + APVL++L+I + I + Sbjct: 14 DPQVVGLAILLAVGFITVVLMGRMLAPVLASLVIAYLLEGIIGYMERWHCPR-WLAVTLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ M + L ++ E + + + + +P + ++ +L Sbjct: 73 FITFMAALFSVIFGLLPLLSQQLAEFFQQLPIMIARGQELLLSLPEYYPNLFSDEQVYDL 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S + + M + + ++ M + +FFF +D Sbjct: 133 MNALRSELAQW------------GQKVLSVSLASVMGLMTLAVYLVIMPLLVFFFLKDKA 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L+ ++ V I + G + + V + G+ + Sbjct: 181 RLIGWLEQYLPR-ERKLAAQVWHDVDFQIGNYVRGKFLEILIVCAVTAITFTFMGLQFSM 239 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + +IP GA + V+ + G + L I + L P L Sbjct: 240 LLSVLVGLSVIIPYIGAVAATLPVAFVAYFQWGFSIDFAYLLGAYGIIQALDGNVLVPLL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ + K + I Sbjct: 300 FAEVVDLHPVAIIVAILVFGGFWGFWGIFFAIPLATLVQAVLKAWPSLPPPEESAI 355 >gi|227543966|ref|ZP_03974015.1| possible permease [Lactobacillus reuteri CF48-3A] gi|300909575|ref|ZP_07127036.1| possible permease [Lactobacillus reuteri SD2112] gi|227186053|gb|EEI66124.1| possible permease [Lactobacillus reuteri CF48-3A] gi|300893440|gb|EFK86799.1| possible permease [Lactobacillus reuteri SD2112] Length = 372 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 39/359 (10%), Positives = 118/359 (32%), Gaps = 30/359 (8%) Query: 6 LNPQGIMRWM---IMFIILVSL--------YFLKGF-------FAPVLSALIIGFTSWPI 47 ++ Q W+ ++ + + +L + + F F P++ + + + P+ Sbjct: 1 MSKQKFYHWLFWPLLLLTVATLIWMCTKIQFIFQPFLTFVSVVFVPLIISGFLYYMLNPV 60 Query: 48 YSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 F I + + +++ + ++ + + + L + E+ LV ++ Sbjct: 61 LKLFMKIKIGRFHMNRGIASLLIVLLLIVILVGGIAMLIPPVVKEISTLV-------RNM 113 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF-LKTNGIDFIPRFASRFGMIFLD 162 + + + + + + + + + Sbjct: 114 PQTVTGIQHLINDTIEHSFLQNVDLNAYYRQFDHQLAGYAQKVLQGLSTRVGDIIGMLTN 173 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + I + + LF+ +DG + + + + + S G I Sbjct: 174 VTVVTITVPVMLFYMLKDGSKLIPSIQKWLSPHHAKEVNDLLGKMNSTLSSYISGQMIEC 233 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G+ Y + G P + LG++ + +IP P A ++++ + + Sbjct: 234 LFVGVFTSIGYVIIGQPLAIVLGIVAGLTNIIPYIGPYIGIAPALFVALTMAPNKIIWVI 293 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + + P ++G +++ L L+ G+ G+ + A+I + Sbjct: 294 VVVIVVQQVDGNIVYPNIIGKTLQIHPLTIIMLLLAAGHIAGIGGMILCIPFYAVIKTV 352 >gi|297565745|ref|YP_003684717.1| hypothetical protein Mesil_1315 [Meiothermus silvanus DSM 9946] gi|296850194|gb|ADH63209.1| protein of unknown function UPF0118 [Meiothermus silvanus DSM 9946] Length = 369 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 105/333 (31%), Gaps = 14/333 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + + + P+ F +K + ++V +V L + Sbjct: 41 IVTLAIGFGFAYLTSPVVRWFERRKLPR-----WLGVLAVYVGLLVFLALASALLAETVG 95 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 V +WL D P + A L + S + + L+ G + Sbjct: 96 RFSQMVGKLPATMGVALQWLHDTPANLGAVPLPEEVRSLLSEFGLNLQRILEGFGQSLLG 155 Query: 151 RF--ASRFGMIFLDYCLSII-------FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G +D+ + ++ ++ + D I+ L L + + Sbjct: 156 TLQNLLSQGGRLVDFLIGLVGGVAQALVALVISIYLLYDLPRIASALLQLIPKPYQSRTL 215 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I+R G +A GL +G L GVP LG++ + +IP I Sbjct: 216 EIARKADLAFGGYIRGQLQVAFWVGLTIGVGLALVGVPLAGGLGLLAGVFNLIPYVGVIV 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 T ++ L L + + L P ++G L + ++ G Sbjct: 276 STVPALLLAATVGWPTVLLTLLVVWLTNQLEGHLLSPRILGSTTNLHPVTVIAAILIGAS 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GLLG + A ++ ++ + + +E Sbjct: 336 LFGLLGALLMVPTAAFAKILIQDYYLKSRLYEE 368 >gi|298368747|ref|ZP_06980065.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282750|gb|EFI24237.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] Length = 356 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 120/322 (37%), Gaps = 10/322 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY-YGMLEM 89 P + A ++ + P+ K+ + A + + ++ L + + + Sbjct: 33 LTPFVIAAVLAYVLNPLVEWLQLKRFKR--GAASMMVMVFALSVLLALTLIIVPMLINQF 90 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV+++ +P + + + + + S T + + I Sbjct: 91 NNLVARLPQITAFVQNTL-----LPWLSRYAGRYIELDTQSIVGWLQSHTGELSGTLQKI 145 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + ++ + L++F D SQ + L F + +I+ + + Sbjct: 146 MPEVMKQSGNVISGVSNLFLLPFLLYYFLLDWRRWSQGISKLVPRRFIDTYSRITGNMDE 205 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 V+ G ++ + G+V G L G+ S A+G+I I+ IP GA ++ Sbjct: 206 VLGEFLRGQLMVMLIMGVVYGVGLMLTGLDSGFAIGMIAGILVFIPYLGAFTGLLLATVA 265 Query: 269 LLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L++ ++ + + I F+ + P +VG I L F L+ + MG +G Sbjct: 266 ALLQFGTWHGLIMVWVVFGIGQFLESFIVTPKIVGDRIGLSPFWVIFSLMAFGQLMGFVG 325 Query: 328 LFIGPVLMALIAVIWKESIMAI 349 + G L A+ V+ +E A Sbjct: 326 MLAGLPLAAVTLVLLREGAAAY 347 >gi|194290638|ref|YP_002006545.1| hypothetical protein RALTA_A2553 [Cupriavidus taiwanensis LMG 19424] gi|193224473|emb|CAQ70484.1| conserved hypothetical protein, DUF20; putative PERMEASE TRANSMEMBRANE TRANSPORT PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 357 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 109/316 (34%), Gaps = 12/316 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P L A I + P ++ + + V + ++ + +L Sbjct: 33 PVLTPFLFAFIFAYILNPGVDWLQRRRVPRA--------IGVTLMILLLTVVCVMLVLLL 84 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT--NGI 146 + L ++ + + + L+ + A P ++S+ F + + + Sbjct: 85 IAVLQREIPQVREQLPILLKKLNSVVSPRLAEFGVRVRFDFPGLRNMMSDRFAASPEDLL 144 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + G + + + I +F+ D + ++++ + + ++++ Sbjct: 145 VVLLNYVKMSGSALITVAGIVFIVPIVMFYLMMDWHMVMRRIEGVVPRRWVPKVRELTNE 204 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ G ++ + + +AG V +GV T + IP ++ Sbjct: 205 TDALLSQYLRGQILVMVILAAIYSIGLTIAGFDIGVPVGVFTGLAVFIPYIGFGVGLVMA 264 Query: 267 IY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + LL GN + + + FI L P LVG I L L F L+ + G Sbjct: 265 VLAALLQFGNWYGLAAVAVVYGFGQFIESFYLTPRLVGERIGLHPLVVIFALLAFGQLFG 324 Query: 325 LLGLFIGPVLMALIAV 340 G+ + A++ V Sbjct: 325 FFGVLLALPTCAVLLV 340 >gi|256847905|ref|ZP_05553350.1| conserved hypothetical protein [Lactobacillus coleohominis 101-4-CHN] gi|256715594|gb|EEU30570.1| conserved hypothetical protein [Lactobacillus coleohominis 101-4-CHN] Length = 366 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 117/361 (32%), Gaps = 31/361 (8%) Query: 5 MLNPQGIMRWMIMFIILVSL--------YFLKG---FFAPVLSALIIG----FTSWPIYS 49 M+ Q + W I ++L + + F + V LII + P+ S Sbjct: 1 MVKKQSFLYWSIELLVLALFIWVCSKIDFVFRPILIFISVVFVPLIISLFLYYMLRPVMS 60 Query: 50 SFISKKEES----STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + + + + + + ++ + + + + + E+ E++ + + Sbjct: 61 ALMKVRLGRHRIPRGVASFVIVLLLILIVVSVIAAIIPPMINELTEIIKSLPATAKETQ- 119 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 +W+ + W + L + + S+ G + Sbjct: 120 --KWVVRLSHHPWLKNI------DFNGYYKEMTNQLSKSSETILNGVTSKAGSLIGMLTS 171 Query: 166 SIIFMI---IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++I I + LF+ +D + K+ + + S G I Sbjct: 172 TVIVAITVPVMLFYMLKDSNKFVPSIQKYFSEKHGEEISKLLHQMNTTLSSYISGQAIEC 231 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 I + Y + G P + LG++ + MIP P ++ + + + Sbjct: 232 IFVAVATSIGYLIIGQPVAIVLGLVAGLTNMIPYVGPYIGITPALMVSLAMAPKKIIWVI 291 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I I + P ++G +K+ L L+ G+ G+ + A+I I+ Sbjct: 292 IVVVIVQQIDGNIIYPNIIGRTLKIHPLTIIMLLLAAGNIAGIPGMILCIPFYAVIKTIF 351 Query: 343 K 343 Sbjct: 352 N 352 >gi|213854545|ref|ZP_03382785.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 335 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 104/322 (32%), Gaps = 14/322 (4%) Query: 27 LKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 G AP+L A+++ + WP + + +++ + V L ++ + + Sbjct: 15 FSGLLAPLLVAIVLAYLLEWP-TARLQAIGCSRRWAASIVLILFVGILLLMAFVVMPIAW 73 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + N+ P M A + + + + ++ +K + Sbjct: 74 QQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSL 133 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + L + ++ + + +FF +D + + + ++ Sbjct: 134 ASLV---------GLLTLAVYLVLVPLMVFFRLKDKEQMLNAVRRVLPRNRGLAG-QVWN 183 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + I + G + + G+ + L G+ + L V+ +IP GA + Sbjct: 184 EMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIP 243 Query: 265 V-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V + L G F I + L P L + L L +V Sbjct: 244 VVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLW 303 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 G G+F L LI + Sbjct: 304 GFWGVFFAIPLATLIKAVVHAW 325 >gi|322372912|ref|ZP_08047448.1| putative membrane protein [Streptococcus sp. C150] gi|321277954|gb|EFX55023.1| putative membrane protein [Streptococcus sp. C150] Length = 378 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 111/292 (38%), Gaps = 4/292 (1%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELW 123 ++ + + ++ + + ++ + ++ ++ ++ I + WL + + Sbjct: 79 VSLLLAFATIGLVFTWVVFTVLPDLIDSINTLISQDRSAINNLINWLLKNKSLQKVIQDF 138 Query: 124 TKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S L+ NG+ + ++ +SI+F L + G Sbjct: 139 GGVTQVRELINTYSAQLLQQIMNGLTSFLTSLTSLPSTLINLFISIVFSCYVLAGKEKLG 198 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ ++ F + + I+ R+ F+ ++ A G + + P Sbjct: 199 NQVNRLVEVYLGR-FGKTFHYVVGILNNRFRNFFVYQSLEACILGTLCYIGMRIFDFPYA 257 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ AMIP + L++ ++ A + I + P++V Sbjct: 258 ATISILIGFSAMIPVVGAYIGVTIGTILIMTHSVTLALLFIAYVVILQQFEGNLIYPYVV 317 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GG LP + F + G G+LG+ + + A + I K++++ +++K Sbjct: 318 GGSTGLPGIWVIFAITIGSALGGILGMLVSVPVAATLYQIVKDNVVKREQDK 369 >gi|282600568|ref|ZP_05979072.2| putative membrane protein [Subdoligranulum variabile DSM 15176] gi|282572005|gb|EFB77540.1| putative membrane protein [Subdoligranulum variabile DSM 15176] Length = 374 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 102/328 (31%), Gaps = 11/328 (3%) Query: 31 FAPVLSALIIGFTSW-PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +P +++ + P F V++ + + + + L + + Sbjct: 39 LSPFAWGIVLAYVLDIPARFFAEKLFGGKRGFAVVLSYLLLFSVVGLLLSLVVPQLAESI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 V ++ + W+ G + L + + K+ Sbjct: 99 SSFVGRLSTYEKDIQNALDWVRQTFGIDT-----ETLEGYVGELTRELQNWFKSVSGQAA 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISR 205 A + + + + +++ + + + + + P + Sbjct: 154 QAAADAAAGVAGAAMDAFVTLAVSI-YLLGSKDLLLRAVRTCLRAALPPRQAGSLFSVCT 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G + A+ G+ L + + V+ + +IP P Sbjct: 213 MANRTFSGYIGGQLVDALLVGVETFVLMSLFRLDYAPLIAVLVGVTNIIPVLGPFIGAVP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +L+ + A L + I + P ++GG LP L ++ G G+ Sbjct: 273 GAVILLLESPLQAVEFVLIILVVQQIDGNFIAPRIIGGATGLPGLGVLLAIIVGGSLFGI 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ IG +A+I + KE++ A + + Sbjct: 333 PGMVIGVPTLAVIVTLLKEAVGAGLQAR 360 >gi|291520696|emb|CBK75917.1| Predicted permease [Butyrivibrio fibrisolvens 16/4] Length = 259 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 96/216 (44%), Gaps = 7/216 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ I + G+ F + ++++ I +F + + + +F ++K Sbjct: 48 AKNMNTIMSTTADVGVAFAQFFIALLLSI----YFLAEKDKLKSGGSRFLKAVFKDQYEK 103 Query: 203 ISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +S I+ K++ + I A+ G++ + G+P + V+ A+ +IP P Sbjct: 104 VSYIIKQSDKILNCYIVYNLIDALVVGIINAIFMGIVGLPYAGLVSVVVAVFNIIPTFGP 163 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + +LL+ + A ++ AI + ++P L G + + L G+V G Sbjct: 164 AIGAVIGGFLLLLVEPWYAAAFLIFTAILQTLDGYVIKPKLFGDSLGVSGLWILIGIVTG 223 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +G++G+ + +A++ +I+ + ++ E K++ Sbjct: 224 GKMLGVVGILLAIPTVAILDMIYHKYLLPFLEQKDE 259 >gi|89099562|ref|ZP_01172437.1| hypothetical protein B14911_11272 [Bacillus sp. NRRL B-14911] gi|89085715|gb|EAR64841.1| hypothetical protein B14911_11272 [Bacillus sp. NRRL B-14911] Length = 352 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 128/336 (38%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + W+I I++ +L YF+ P++ A I P+ K +I Sbjct: 7 KRFFIWLIGLILIGTLFYFILPVSVPLIVAFITALMLEPLVKLLQGKLNIKRRISVMIVF 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + F+ + E +LV WL A+E K + Sbjct: 67 IAFVLFIGLSGYFITTKVITEAIKLVENAPEYVNEIN--NAWLDAEEKFTRAAEDLPKDV 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFA----SRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +TFL + + + +Y +S + +IALF F D Sbjct: 125 VD--EISNQVQTFLNKTKTELVAYVSIDNVKALLTNIPNYLVSFLVYLIALFLFLIDLPR 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + ++ + V+ F ++++ V + + Sbjct: 183 LRRGAYNHLTEKTADKVSFMTSRLSYVVLGFFKAQFLVSLIIFFVSLVGLLIIAPDIALV 242 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++ I+ IP G+ + +++ L+ G++ T L + A+ L I+ +T+ P ++G Sbjct: 243 MALVLWIIDFIPIIGSIVILGPWALFHLLTGDVVLGTKLAVLAAVLL-IIRRTVEPKVMG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L L T + G++ +G+LG IGP+++ Sbjct: 302 THIGLSPLSTLIAMYLGLKLLGILGFIIGPLILIAF 337 >gi|254282735|ref|ZP_04957703.1| permease, PerM family [gamma proteobacterium NOR51-B] gi|219678938|gb|EED35287.1| permease, PerM family [gamma proteobacterium NOR51-B] Length = 357 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 12/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +I+ LV L + PVL AL++ + + + ++ S + Sbjct: 17 ESVVLLIILVSALVVLITIGDVLTPVLVALVLAYLMQGVANQLAARGVPQS--------L 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V ++ + F + + ++ + + +S++ G+ A Sbjct: 69 GVWIALLLFMGVFFGSSFGLVPLIWQQLASLLRESPEMIEQVSNLLNGLAAEYPQLISQQ 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + L G + R SR L + ++ + + +FFF +D I Sbjct: 129 QVEELLGGIQRELAQFGQVVLARSLSRI-PGLLALLVYMVLIPMLVFFFLKDQQKIFAWF 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S P ++I + + + + + G I I G A+ + G+ LG++ Sbjct: 188 SSFLPERRPLL-QRIWQEMDQQVSNYVRGKVIEIIIVGSTSYLAFTIMGLNYAALLGLLV 246 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIK 306 + +IP GA + V + + + + + + ++D L P L + Sbjct: 247 GLSVIIPYIGATLVTVPVVMVAYFQWGVGSELYAITAAYLVIQLLDGNVLVPLLFSEAVN 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + ++ GL G+F L L+ + + S Sbjct: 307 LHPVAIIIAVLFFGGIWGLWGVFFAIPLATLVNAVLCAWPARLDSPPNPAS 357 >gi|146319385|ref|YP_001199097.1| permease [Streptococcus suis 05ZYH33] gi|146321590|ref|YP_001201301.1| permease [Streptococcus suis 98HAH33] gi|253752410|ref|YP_003025551.1| hypothetical protein SSUSC84_1565 [Streptococcus suis SC84] gi|253754236|ref|YP_003027377.1| membrane protein [Streptococcus suis P1/7] gi|253756170|ref|YP_003029310.1| membrane protein [Streptococcus suis BM407] gi|145690191|gb|ABP90697.1| probable permease [Streptococcus suis 05ZYH33] gi|145692396|gb|ABP92901.1| probable permease [Streptococcus suis 98HAH33] gi|251816699|emb|CAZ52341.1| putative membrane protein [Streptococcus suis SC84] gi|251818634|emb|CAZ56469.1| putative membrane protein [Streptococcus suis BM407] gi|251820482|emb|CAR47224.1| putative membrane protein [Streptococcus suis P1/7] gi|319758816|gb|ADV70758.1| permease [Streptococcus suis JS14] Length = 376 Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 122/337 (36%), Gaps = 7/337 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G + I F + E+ S +++++ + I L + + Sbjct: 35 LLGSMNSLFIGAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFALIVTGLVV 94 Query: 87 LEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--LKILSETFLKT 143 + + LV+ V L + +P+ ++ + + ++ L + + + L L L + Sbjct: 95 IVLPTLVTTVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQLKNLTLIS 154 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + I +++I + + P ++ Sbjct: 155 SLVTPILSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATLPEKAVRV 214 Query: 204 SRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +VI T + + A G ++ +Y L+G+P G++ +++ +P P Sbjct: 215 VNYIGEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLSFVPYIGP 274 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 S +S + N A I I + P +VG + LP L T + G Sbjct: 275 FSACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFTLAAALIG 334 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GLLG+ + A++ + +E + + + ++++ Sbjct: 335 GNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQDEL 371 >gi|262204300|ref|YP_003275508.1| hypothetical protein Gbro_4482 [Gordonia bronchialis DSM 43247] gi|262087647|gb|ACY23615.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM 43247] Length = 390 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 120/364 (32%), Gaps = 22/364 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGF------FAPVLSALIIGFTSWPIYSSFISKKE 56 + W ++ I L+ F PV A++ P+ + + Sbjct: 2 HPTVRAAAEWSWRLLIIAAAGFVLLRLFTEFEEVLVPVALAILGSAMLVPVVDALDRRGV 61 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG 115 S +A + V+ + + L + + + E V ++ + + +WL D P Sbjct: 62 PRS-----LAVLGVIVVALGILAAVLTFVVREFIRGVPELADQVRVTVDRTKQWLVDGPL 116 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + ++ ++ + T+G AS L +IF + Sbjct: 117 HVDSEQVRNAGSDVLNVVQNNQDKV--TSGALATATTASEIVTGALLTLFLLIFFLY--- 171 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 G I + L + + ++A+ + + +G + Sbjct: 172 ----GGGQIWRFLVKGVPSGTRSRVWAAGIAGFGTLVGYVRATVVVALVDAIGIGIGLAI 227 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 VP + L + + A IP GA +S T + L+ A + + Sbjct: 228 LRVPLALPLASLVFLGAFIPIVGALLSGTLAVLVALVTQGWIAAVITLAIVIGVMQLESH 287 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+PFL+G ++L + + G+ + G++G + L+A + + E Sbjct: 288 VLQPFLLGRSVRLHPVAVVLAIAAGLVSAGIIGGLLAVPLIAFLNTAIRHLSADEDEPSA 347 Query: 355 KISS 358 I S Sbjct: 348 AIDS 351 >gi|255659544|ref|ZP_05404953.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544] gi|260848098|gb|EEX68105.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544] Length = 351 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 97/283 (34%), Gaps = 1/283 (0%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L G + L +++++ R+++D P + + Sbjct: 58 LAAAIVLGTFLLICLGLVLLVSSTFIPTFTRFVTDFPQITEKLQQMPLIHDNAYLTDEFE 117 Query: 138 ETFLKTNGIDF-IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + +L+ + + + + ++ ++ F+ +DG I L SL Sbjct: 118 QFWLELKAASVDALKSSLTVLLSIFSKFIDMVIILFVTFYLLKDGDDIKVYLASLFPTRD 177 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + +R+ +I V+ Y +P +++ I +P Sbjct: 178 YSRVLALFNRILSALRTYICSQLVICCLTATVVFLYYTARSLPYASVFAMVSGISEFVPV 237 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P + I L + + A + I + + P L+G + L + G+ Sbjct: 238 LGPTVASIFGILLTATVDPWIAIQTAGFYLILTQVNHNAVYPTLIGKSLNLHPVAIILGI 297 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G +G G+F+ + + ++ ++ E +K+ ++ Sbjct: 298 ILGGEVLGAAGMFLAVPFIVICKLVIEDIYKDRMETIKKLRAS 340 >gi|225378516|ref|ZP_03755737.1| hypothetical protein ROSEINA2194_04184 [Roseburia inulinivorans DSM 16841] gi|225209619|gb|EEG91973.1| hypothetical protein ROSEINA2194_04184 [Roseburia inulinivorans DSM 16841] Length = 280 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 73/196 (37%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + +S F LF + + + + + I + + Sbjct: 50 SAVGSIASGLATFFISFSFACYILFQKEKLHLQVRKVIFAFIPKQKADAILNICSLTYRT 109 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G + A+ G++ + +P + +G++ A A++P AV +L+ Sbjct: 110 FANFLAGQCLEAVILGMMFVITLSILKMPYALLIGILIAFTALVPIFGAFIGCAVGSFLI 169 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 N A + + I + P +VGG + LP + + G MG++G+ I Sbjct: 170 FMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSVGLPSIWVLAAVTIGGNLMGIIGMLI 229 Query: 331 GPVLMALIAVIWKESI 346 L+++ I++E + Sbjct: 230 FIPLVSVFYTIFREFV 245 >gi|226325835|ref|ZP_03801353.1| hypothetical protein COPCOM_03648 [Coprococcus comes ATCC 27758] gi|225205959|gb|EEG88313.1| hypothetical protein COPCOM_03648 [Coprococcus comes ATCC 27758] Length = 416 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 123/343 (35%), Gaps = 12/343 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-----IATVS 69 +++ +I + F A +I + K +E + A I+ + Sbjct: 34 VVLGVIKAVWGIIFPFALGGAIAFVINVPMSFLEKKLFGKAKEKGSKAAGKLARPISLLL 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMW-ASELWTKHL 127 + L + ++ + + + ++ + ++ + IP + W+ + +L + Sbjct: 94 TIVLVVGVIVLVMFGLIPQLTATIGSLMNSIADFIPQMQSWVREFTHNNREIMDLVNQVE 153 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +P + L +F+ + G I I A + ++ + Q Sbjct: 154 FNPNKAIQWGMSILGNGAGNFMNTTMTAVGSIVSGVTTFFIAFSFACYILFQK-EKLHVQ 212 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + P ++ V + TF G + A+ G + + +P + Sbjct: 213 VRKVFFAFIPKRKAEVILEVCSLTYRTFANFLTGQCLEAVILGSMFVITLSILKMPYALL 272 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +G+I + A+IP + L+ + A L I I + P +VG Sbjct: 273 IGIIISFTALIPIFGAFIGCVLGGLLIFMVSPKQAILFILVFLILQQIEGNLIYPHVVGN 332 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + LP + + G +G++G+ I L++++ +++E + Sbjct: 333 SVGLPSIWVLAAVTIGGNLLGIVGMLIFIPLVSVLYTLFREYV 375 >gi|300309868|ref|YP_003773960.1| membrane transport protein [Herbaspirillum seropedicae SmR1] gi|300072653|gb|ADJ62052.1| membrane transport protein [Herbaspirillum seropedicae SmR1] Length = 626 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 116/340 (34%), Gaps = 20/340 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + L LYF + AP+ A I P+ + + A+++ + V + Sbjct: 21 AAVALGMLYFGREILAPLAVAGIASLIILPLVRKLDA-LGLNRAGAAIVSVLLVGSCLVA 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + + +L + A Q + R +++ P +EL + + P Sbjct: 80 LAVVLAFQLVSVTSDL-PQYREAIQDKVESVRAMTERPFARLEAEL-SAVIPQPVPETTR 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI------------IALFFFYRDGFSI 184 S A + + + +F + + L F + S+ Sbjct: 138 SGKKASHAAATAPAPAAEADTRMSVRGAIKRLFALAWGPIGQAGIVLVLLVFILLEQESL 197 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++L L + + + + F ++ + GL++G+ GVP V Sbjct: 198 RERLIRLAGLTEMSRTMQALGDAAEGVSRFFFSQFLVNLAFGLIMGAVLAAGGVPHAVLW 257 Query: 245 GVITAIMAMIPGGAPI---SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + ++ +P + A+ I + G + L +G +E+ + + P + Sbjct: 258 GTLAGVLRFVPYLGALASGVMIAIFIAAIDPGWWLALSFLAFYGCLEVIVA-NFIEPRIY 316 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 G L L + G +GL + P+ + L+ Sbjct: 317 GHSSGLSPLAVIVSALFWGSLWGPIGLLLSTPLTLCLVVA 356 >gi|146342802|ref|YP_001207850.1| hypothetical protein BRADO5979 [Bradyrhizobium sp. ORS278] gi|146195608|emb|CAL79635.1| Conserved hypothetical protein; putative membrane protein, membrane transport protein [Bradyrhizobium sp. ORS278] Length = 660 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 108/355 (30%), Gaps = 29/355 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + II+ LYF + PV A+++ F P+ + + +A VSV+ L Sbjct: 25 ALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVAQLQRLRAPR-----GLAVVSVVFL 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQS 132 V + L ++ +L S++ + D G E + L + Sbjct: 80 AFVLIFALGSLLATQLTQLASELPNYQSTMSNKIQSFRDTKAGRGTLERASDMLRDLGKE 139 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMI---------------------FLDYCLSIIFMI 171 L E ++ I + + +I Sbjct: 140 LDKPKEPEAPRPAGGLRGNSSTPVAPIPVEVRQPDPGALDSLRTLISPLIHPLATTGIII 199 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 I + F + +L L + FL + G G+V+G Sbjct: 200 IFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLSRLFLTQLALNGGFGVVIGL 259 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIEL 289 WL G+PS + G++ A + +P + A + L + + + Sbjct: 260 GLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAAVDPGWTMLIWTLALFVVVE 319 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ + P + G L + G +GL + L + VI + Sbjct: 320 PLLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVLATPLTVCLVVIGRH 374 >gi|16330887|ref|NP_441615.1| hypothetical protein sll1166 [Synechocystis sp. PCC 6803] gi|1653381|dbj|BAA18295.1| sll1166 [Synechocystis sp. PCC 6803] Length = 367 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 109/294 (37%), Gaps = 6/294 (2%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +++ + + + G+ + + +++ +Q + + S L+ Sbjct: 68 LAIFAVITISFALIALGGITLIPLMGNQLGNLSQDIPRWLSGSQEHLANLKNSTLFLTLD 127 Query: 128 SHPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ L + T + I + + + + + + +++ F G + Sbjct: 128 NAGVNVDDLFQKAYLTLSKELDRIGQISLKVLTETIGGVVDTLVILVLTIFLLVGGDTFW 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q + S + KKI + ++ R F+ I+A G + + G+P + Sbjct: 188 QGILSWLPS---PWEKKIPQYAGEIFRDYFISRLILAAGSSMARLVVFMALGIPYSILFA 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP + ++ LL+KG A F+ + I D + P L+G I Sbjct: 245 FSLGLASLIPFAGAVVTLIGTLVLLLKG-WVVAVKFFVSAIVIDQITDNGVAPKLMGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + + G GLLG+ + + ++I + + EN+E + Sbjct: 304 GLNPVWILISIFIGAEIAGLLGVLLAVPIASVIKKVIDDMRAGKTENEEIDTEE 357 >gi|28378015|ref|NP_784907.1| transport protein [Lactobacillus plantarum WCFS1] gi|254556222|ref|YP_003062639.1| transport protein [Lactobacillus plantarum JDM1] gi|300767941|ref|ZP_07077849.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180196|ref|YP_003924324.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270849|emb|CAD63754.1| transport protein [Lactobacillus plantarum WCFS1] gi|254045149|gb|ACT61942.1| transport protein [Lactobacillus plantarum JDM1] gi|300494482|gb|EFK29642.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045687|gb|ADN98230.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 397 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 106/320 (33%), Gaps = 9/320 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFL 81 FL F P+L + + + P+ K S T I V + L + + L Sbjct: 40 FLSVVFMPILISGFLFYMLNPLVKLLTKVHYKKFRISRTGAVAIVFVLLFGLLVWGAVSL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ +L+ + L + + ++ + + S+ FL Sbjct: 100 LPRLVSQVTQLIYNLPSIATEMQKAATKLINNSSVLKRIDISSYTKQFNGEISKYSQNFL 159 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++ + + + ++ LF+ +D + Sbjct: 160 SSLSSSVVTVISTITSVTIMAITIPVV-----LFYMLKDSEKFIPAISRFLPKKQRPEVI 214 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + I S G I + G Y L P + LGVI + +IP P Sbjct: 215 GLLQKMGDTISSYISGQVIECLFVGTFTAIGYMLISQPYGLLLGVIAGLTNIIPYVGPYI 274 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A S+ + + + + I + + P ++G +K+ L L+ Sbjct: 275 GIAPSLIVAFTKSPMQVVYVIIVVVIVQQVDGNLIYPNIIGRTLKIHPLTIIILLLAAGN 334 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G+LG+ + A++ + Sbjct: 335 IAGILGMILAIPFYAVVRTV 354 >gi|332187090|ref|ZP_08388830.1| hypothetical protein SUS17_2225 [Sphingomonas sp. S17] gi|332012790|gb|EGI54855.1| hypothetical protein SUS17_2225 [Sphingomonas sp. S17] Length = 364 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 79/227 (34%) Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + S + + + + S ++ L+ + +++ F Sbjct: 103 PILLDQLAGWASQSPVGAKIVDAVRAAYAGSRVAQDISGIVSGAGEFVLNCLLLLVGALF 162 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F D + L H + +R I G+++G +A Sbjct: 163 FAADPKVYERGFLLLIPHSMRPAIEDALFDTESTLRLWLRAQLIQMTTMGVLVGIGLGIA 222 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVPS ALG++T + +P PI+ ++ L +G + A+ I + Sbjct: 223 GVPSAAALGLLTGLSEFVPYVGPIAAMLPALGLAAQGGNGAVIGTLVTFAVVRLIQTNAI 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 PF+ + +P T F ++ GL GLF ++ ++ + + Sbjct: 283 TPFVTSRVVAIPPAITLFAIIAIGTIFGLFGLFFSAAILVVVFTLIR 329 >gi|312143377|ref|YP_003994823.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] gi|311904028|gb|ADQ14469.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] Length = 348 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 103/305 (33%), Gaps = 10/305 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + I + P+ F+ K + ++ +++ L F E++ Sbjct: 41 IIPSLLGIFIYYLLRPL-VRFLHKYIKYKNLSILLTITALLILISFITYFAGNIIYTEIQ 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + I + +SDI + EL ++ F + G Sbjct: 100 RLIRFLSDYENIAIRISELISDIEEIGFLEEL---------DIESRLIQFARNVGNRLTD 150 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + +F +D + ++L L K I + + ++ Sbjct: 151 YDFVGIFDSLAQMFTIVFLTPFIVIYFLKDDKLLFEKLIKLVPKDNQETVKVIFKKIDRI 210 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 ++ G ++ Y G+P+ + L I AI ++IP P + ++++ Sbjct: 211 FGVYMPSQLLVGAISGTIMFIGYTFIGMPNALGLSFILAIASIIPVIGPAIGVSPAVFIA 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + + I + +RP L GG + + F +V G+LG + Sbjct: 271 LTTSWVMLIQVAVLMTIVQLFENNVVRPILQGGMLNTHPIAIIFSIVIATLLFGILGALV 330 Query: 331 GPVLM 335 + Sbjct: 331 AVPIY 335 >gi|320526967|ref|ZP_08028156.1| hypothetical protein HMPREF9430_00255 [Solobacterium moorei F0204] gi|320132552|gb|EFW25093.1| hypothetical protein HMPREF9430_00255 [Solobacterium moorei F0204] Length = 380 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 127/329 (38%), Gaps = 5/329 (1%) Query: 31 FAPVLSALIIGFTSWPIYS----SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +P + + I F P+ S++ K + VIA+ + + I+ L F + Sbjct: 48 LSPFIYGIGIAFLLNPLRKIIEYSWLGKAKLKPRTKKVIASFGALFIGIIMLFVFFSILI 107 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK-TNG 145 +M + + + + + R + L T + + + +L + + Sbjct: 108 PQMISSIQTFLSSFEGYVDSARNFFESNNFFSDDLLKTLNPVIDKGVSMLGDWVSNIASS 167 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ I ++ F +++ + +I + L I + L +L + +R Sbjct: 168 LNAILMYSVIFAKSVMNFLIGMIIALYILLDEINLKRQIKKVLYALLPEKTTKSILRTTR 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + S G + ++ G++ +P + V+ + MIP P Sbjct: 228 LTINTFNSFVAGKAVDSLIIGILCYIILSFMKMPYTPLISVVVGVTNMIPVFGPFLGAVP 287 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SI +L+ + F A ++ I + + P ++GG + LP L F ++ G G+ Sbjct: 288 SILILLLVDPFKALEFSIFVLILQQVDGNIIGPRILGGAVGLPTLYVMFAIIIGGALFGI 347 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+FIG + ++I V+ E I + K Sbjct: 348 VGMFIGVPVFSVIFVLVSEFIHRQLDRKN 376 >gi|255027621|ref|ZP_05299607.1| hypothetical protein LmonocytFSL_16972 [Listeria monocytogenes FSL J2-003] Length = 345 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 115/361 (31%), Gaps = 26/361 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I + ++ +LV Sbjct: 65 VLLLYALIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP G IS ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 Query: 358 S 358 Sbjct: 344 H 344 >gi|229016266|ref|ZP_04173214.1| UPF0118 membrane protein [Bacillus cereus AH1273] gi|229027023|ref|ZP_04183340.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228734281|gb|EEL84958.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228745037|gb|EEL95091.1| UPF0118 membrane protein [Bacillus cereus AH1273] Length = 257 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 76/205 (37%), Gaps = 8/205 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G D I ++ + G + LS I + FF + I + ++ + Sbjct: 45 EQGADVIYQYLAGIGKVSSQMFLSFILSL----FFLLEKERIIAFTSKFKDSKLSFFYNE 100 Query: 203 ISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 I+ K +RS +IA+ ++ A WL G P + L ++ ++ +IP G Sbjct: 101 IAYFGQKFVRSFGKVIEAQFLIAVINCILSVIALWLLGFPQLLVLALMIFLLGLIPVAGV 160 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 IS + I G + + ++ + L P + LP TF L+ Sbjct: 161 IISLFPLCIIAYNVGGMTYVVYILIFITVIHAFESYFLNPKFMSAKTNLPIFYTFIILIF 220 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G+ GL IG + + ++ Sbjct: 221 SEHFFGVWGLIIGIPIFIFLLDVFD 245 >gi|154245378|ref|YP_001416336.1| hypothetical protein Xaut_1431 [Xanthobacter autotrophicus Py2] gi|154159463|gb|ABS66679.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 606 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 109/351 (31%), Gaps = 29/351 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + I+ LY + F P+ A+++ F P+ + + + + V+ Sbjct: 20 RLVTFFAAIAIVTVLYLGRDVFVPIAVAILLAFVLAPVIMVLRRIRIPRTAAVVTVVLVT 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L+ L L++ +LV+++ Q+ + + + + S + + + Sbjct: 80 FLG-----LMALGGMIALQVTDLVAELP---QYRMNMRDKIKSLKEAASGSGTFERTMDL 131 Query: 130 PQSLKILSETFLKTNGIDFIPR------------------FASRFGMIFLDYCLSIIFMI 171 Q L + G+ S L + + Sbjct: 132 VQDLSREIDGPQAGQGLAAGATDGRPVLVEVHEPPPGTLGTISAVVTPLLHPLATFGIVF 191 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 I + F + + L + FL + G V+G Sbjct: 192 IFVLFILLQREDLRNRFVRLAGAHDLQRTTAALDDAGSRLSRFFLAQVALNASFGAVIGL 251 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF- 290 W+ GVPS G+ A++ +P A+ I L + + L + Sbjct: 252 GLWIIGVPSPFLWGLAAAVLRFVPYIGAAIAAALPIGLALAVDPGWTMVLSTVALFLVVE 311 Query: 291 -IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 +V + P L G L + G +GL + P+ + L+ Sbjct: 312 PVVGHVIEPLLYGRSTGLSPVAVIAAATFWTWLWGPIGLLLSTPLTLCLVV 362 >gi|187934668|ref|YP_001885371.1| permease [Clostridium botulinum B str. Eklund 17B] gi|187722821|gb|ACD24042.1| permease [Clostridium botulinum B str. Eklund 17B] Length = 343 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 114/307 (37%), Gaps = 13/307 (4%) Query: 38 LIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 I+ + PI F +K + +V+ + ++ +FI ++ + E+ + + Sbjct: 44 FILAYIIAPIRDLFQNKFKIKKKVASVLIILIILGMFISCIILIIPELFKEISN-IGVIF 102 Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + + + ++ + + +L + L N + Sbjct: 103 DNIANFLEDIYVKFRVDSFPILKSIYNELIEKGNALFLNLSKSLFDNIV----------- 151 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + ++ +S + + +++F DG I +L + KKI + + KV+ G Sbjct: 152 -LIVENLVSCAVIPVVVYYFLCDGDKIYNKLLFILPTEKREVTKKILKDIDKVLGRYITG 210 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 +++ G + + V + + ++ AI+ +IP PI ++ + + + Sbjct: 211 QVFLSLIIGFLTFILLMIFKVKFPIWISILNAILNIIPYFGPIFGGVPAVLVALLDSPIK 270 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A + + + I L P + + + L+ G + G +G+ + + + Sbjct: 271 ALWVTIGVFVIQQIEGNILSPKITADSTDMHPVIIIILLLIGDKFGGFVGMLLAVPIGVI 330 Query: 338 IAVIWKE 344 I V++ + Sbjct: 331 IKVLYDD 337 >gi|110639302|ref|YP_679511.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110281983|gb|ABG60169.1| permease [Cytophaga hutchinsonii ATCC 33406] Length = 365 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 124/329 (37%), Gaps = 15/329 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+ L+ + P+ + ++ P+ + KK ++A + + L IV Sbjct: 18 LFVFFYVLFLGQEILVPLTFSWLLAILLNPVVNFLERKKINR-----IVAILLAITLMIV 72 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + ++ + V + + G W S + S Sbjct: 73 VTAGILFFIGSQFSMFVDMLPQLKHKSTELAH-----KGLTWLSHTFNITTPKVNSWINE 127 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + +F + L ++ + I LF FY+ + Q + L Sbjct: 128 QKAKSMEGASGLLGTTLGTVSGVF--FALFLLPVYIFLFLFYK--PLLLQFIAKLFSSDK 183 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + +I++ +G+ I ++ A L G+P + LGVI AI+ +IP Sbjct: 184 HTVVADVLKETKSLIQNYLVGLMIEMCIVAVMNSVALMLIGIPYAILLGVIGAILNLIPY 243 Query: 257 GAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I A+ + + L+ +A +FL + F+ + L P +V +K+ + Sbjct: 244 IGGIVAIALPMIMGLMTDTPASALYVFLAYMLIQFVDNNFLVPKIVASKVKVNAFISIIV 303 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G G+ G+F+ L+A++ VI+ Sbjct: 304 VLIGGTLWGVAGMFLSIPLIAILKVIFDR 332 >gi|317475118|ref|ZP_07934386.1| sodium pump decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|316908762|gb|EFV30448.1| sodium pump decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 376 Score = 76.0 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 130/364 (35%), Gaps = 19/364 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + +R +I+ +I++ L L P A +I + +P+ + F K + Sbjct: 1 MERKKITFDSFIRGVILGVIIIGLLMLLKRLSSVLLPFFIAWLIAYLVYPLVTLFQYKLK 60 Query: 57 ESSTFLAVIATVSVMCLF-IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + +++ + + + L + E + + ++ HG + + Sbjct: 61 FKNRIVSIFCALFTILIIGAGAFYLLVPPMIQEFGRVQALLIQYFSHGTYNSNVPTSL-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 SE ++ ++ ++ L + +PR S +I L+ Sbjct: 119 ----SEFLRDNIDAKFITELFNKENLLDALKEAVPRLWSLLSDSIDLLFSVFTIFLILLY 174 Query: 176 --FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F D SI++ L + + I + + F G +A+ G++ + Sbjct: 175 VIFILLDYESIAEGWTHLVPIKYRPFTISILNDIKTGMNRYFRGQAFVALCVGILFSIGF 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIV 292 + P + LG+ + M+P I F + ++K + + + AI +FI+ Sbjct: 235 LIIDFPLAIGLGLFIGALNMVPYLQVIGFVPTIVLAILKASDTGGNFWIIIASAIAVFII 294 Query: 293 -----DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 D + P ++G L L MG+LG+ I L L+ ++ I+ Sbjct: 295 VQAIQDGFIVPRVMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFII 354 Query: 348 AIKE 351 + Sbjct: 355 NKEN 358 >gi|167042757|gb|ABZ07476.1| putative domain of unknown function DUF20 [uncultured marine microorganism HF4000_ANIW137G21] Length = 361 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 114/333 (34%), Gaps = 22/333 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++FI ++++ LK P++ A ++ F P + A++A +M Sbjct: 30 AVLLFICILAVIHLKVILQPLVVATLLFFLIRPPAQWLEERYGH-----AILAYGILMAG 84 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I +L + E + + WL ++ Sbjct: 85 VIAVILVGAQILYASLTEFSDQADSLSAKMSEKIVWLEEL---------------SFYGY 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ I A+ F + S + + I L F + ++ ++L + Sbjct: 130 SFDTSALTNLITVERINDIATGFVGSLAGFTGSAVTVFIFLLFIIVEAETLPRRLRAAFP 189 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + IS I + +A+G+ +++ G+P IT ++ Sbjct: 190 DEL-DRFSSISENAGAAINTYVSTKASVALGQAILVALLLKWMGIPGWFLWASITFLLDF 248 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P GAP+SF I I + A + + + + P L G + + + Sbjct: 249 VPYVGAPLSFIPPVILSFILKDPMTAVLITAVLFGNQLVWGQFIEPQLAGQRLDMSPIVL 308 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G++G+ +G L ++ ++ + Sbjct: 309 LILVAFWGWAWGIMGMILGVPLAVIMKLVLESD 341 >gi|260575895|ref|ZP_05843890.1| protein of unknown function UPF0118 [Rhodobacter sp. SW2] gi|259021821|gb|EEW25122.1| protein of unknown function UPF0118 [Rhodobacter sp. SW2] Length = 364 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 115/339 (33%), Gaps = 14/339 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + V L+ L P + + + PI A I+ Sbjct: 16 ALVFFVLLWVLGSVILPFVLGGAVAYFLDPIADRLQRLGLSRVAATATISIAM------- 68 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L + + + L +++ + R + + S + Sbjct: 69 -MLIVVLLVLAVIPTLFNQLTALINSAPDIVRKMQAFLTERFPE--LNDRTSTIRQTLQS 125 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +K G + ++ + I+ + + F+ D + ++D++ Sbjct: 126 IGDTIKAQGGQLANTLIGS-ALGVVNAVVFIVVVPVVAFYLLLDWDRMVARIDAVLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++R + +V+ + G + + G A AG+ + +GVI + IP Sbjct: 185 APVVRQLARDIDRVLAAFVRGQLSVCLALGTFYSVALMAAGLQFGLVVGVIAGAITFIPY 244 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + ++I L + G+ + + A+ F+ + P +VG I L + Sbjct: 245 VGALIGGMLAIGLALFQFWGDWVSIGIVGGIFALGQFLEGNVITPRIVGNSIGLHPVWLL 304 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L G +G+ + + A + V+ + ++ +E+ Sbjct: 305 FALSAFGSLFGFVGMLVAVPVAASLGVLARFAVAQYQES 343 >gi|56421273|ref|YP_148591.1| hypothetical protein GK2738 [Geobacillus kaustophilus HTA426] gi|56381115|dbj|BAD77023.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 372 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 12/312 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ + K + + + + + L + + L V Q I Sbjct: 48 PLVDALERKAKMPRWLAVSVTLIMLFAAVAGLVTLLVAEIVSGTQYLARVVPEKFQALIT 107 Query: 106 VPRWL---SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 IP + ++ + Q + + + + F Sbjct: 108 YMETFVADQIIPIYKDLAGMFKSLSAAQQDTIMQNIQAVGKKIGTTVGEFVQSILQNIPQ 167 Query: 163 YCL-------SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 IF ++A FF +D + + K + + + + Sbjct: 168 LLAWLPNAATVFIFSLLATFFISKDWHRLMRMAQQWLPTKARTSGKTVFLDLKRALFGFI 227 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 + +++ + V + + +I + ++P G I F IY + G+ Sbjct: 228 KAQATLISITTVIVLIGLLILRVDYAITIALIIGFVDLLPYLGTGIVFVPWIIYTMASGD 287 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 I A L + + L + + P ++ I L L T L G + +G LGL GPV Sbjct: 288 IPFAIGLGVLYVVVLVQ-RQIMEPKVLSSTIGLDPLATLIALFVGFKLLGFLGLIAGPVA 346 Query: 335 MALIAVIWKESI 346 + +I + ++ Sbjct: 347 LVIIRTLHSANV 358 >gi|325103185|ref|YP_004272839.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324972033|gb|ADY51017.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 353 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 127/346 (36%), Gaps = 16/346 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+E + + + + ++++ Y P+L A I P++ SKK Sbjct: 1 MKELPITVIRSLELLGIVLVILIFYVGASIIMPILLAFFISIMLLPVHRFLRSKKI--PE 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 L+++ ++ ++ +F+ +++ F + ++ ++ + + S Sbjct: 59 ILSIVISILLLAIFLGVIIWFFSAQVTKLINEFDQIKTNVNNHL------------NNLS 106 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + N ++ + + F + + + I ++ Sbjct: 107 HWIDNKFGFSSKEQTKFINEQSNNILNSLGQILGGAMGSFSGFIVFFGLLPIYIYLMLFY 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + K + +I++ LG+ I ++LG + G+ Sbjct: 167 KNLFLKFIFMWFSESDHEMVKDSLKESETIIKNYLLGLVIQISYMTVLLGGLMTIFGIKH 226 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I AI+ +IP + V + L + + + ++ F+ + L P Sbjct: 227 GLLIAIIFAILNLIPYIGALFGNIIGVLLTLSATEELSAVITVLIIISVVQFLDNNILMP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +VG +K+ FG++ G G+ G+F+ L+A++ +I+ Sbjct: 287 RIVGSKVKINAFAAIFGVIVGGTVAGIAGMFLALPLIAVLKIIFDR 332 >gi|323342782|ref|ZP_08083014.1| hypothetical protein HMPREF0357_11195 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463894|gb|EFY09088.1| hypothetical protein HMPREF0357_11195 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 368 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 111/341 (32%), Gaps = 22/341 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P + +I F P+ S K +++ + L + ++ + + Sbjct: 36 YLMPFIIGFVIAFLLKPVISKLTKKIGNQKG-SSLLVVILFYILLAAAIFWILVAVIAGI 94 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + V Q + P + + I + + + I Sbjct: 95 QNFAKAVPSFYQTTLS--------PAIESIIVWVEGAVVNLDPDVIDIIESIGRSVVQSI 146 Query: 150 PRFASRFGMIFLDYCLSIIFMI-----------IALFFFYRDGFSISQQLDSLGEHLFPA 198 +++ +I I I+ FFF D I + + Sbjct: 147 DGIFKGISGGTINFITRLISSIPSVLISILIAIISSFFFTLDYQGIVSSVMGMIPIKQRT 206 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 I + V+ + + L A+++ G+ + V L + AI+ ++P G Sbjct: 207 LILDIKDGLISVLGKYLRAYAKLMSLTFVELSFAFFILGIHNPVGLAFMVAIIDILPVLG 266 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I LI GN L + I + ++ L P +VG I L L T + Sbjct: 267 TGTVMIPWFIIELIMGNTPLGIGLMI-TYIVITVIRNILEPKIVGDQIGLHPLATLILIY 325 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++ G +GLF P+ ++ + E + I E+ + Sbjct: 326 VGLKMFGFIGLFALPISATILKTLHDEGKINIFRRTEEPTE 366 >gi|88811404|ref|ZP_01126659.1| hypothetical protein NB231_11734 [Nitrococcus mobilis Nb-231] gi|88791293|gb|EAR22405.1| hypothetical protein NB231_11734 [Nitrococcus mobilis Nb-231] Length = 378 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 121/329 (36%), Gaps = 16/329 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y L+ P L+ ++ + + P+ + T +V+ +F L Sbjct: 35 IYLLRPILMPFLTGALLAYLADPLADRLERLRLNR--------TFAVIVVFTGLSLVGVG 86 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFL 141 +L + L S++ V W+ +P + + + L ++E + Sbjct: 87 ALLLLLPMLGSQLDSLRSLLPQVVDWVHQVGLPWLRTHAGVGIESLDLATLRGAIAEHWQ 146 Query: 142 KTNG-IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T+ + A+ G+ ++ + + F+ RD + ++ L Sbjct: 147 STSSFAASVVAQATSSGLALAGLLANLALIPVVTFYLLRDWDVLIARIRDLLPRRMEPII 206 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++ +V+ + G ++ + G++ WL G+ + +G++ I +++P I Sbjct: 207 STLAGECNEVVAAFLRGQLLVMLALGVIYAFGLWLLGLDLALLVGMLAGIASIVPYLGFI 266 Query: 261 SFT--AVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGL 316 A + + L + G + + L P LVG I L + F + Sbjct: 267 VGIGSAALATVFQFSDWLMPLGL-VCGVFLVGQLLESLLLTPLLVGDRIGLHPVAVIFAV 325 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G + G G+ + + A+I V+ + + Sbjct: 326 LAGGQLFGFSGILLALPIAAIIMVLLRHA 354 >gi|300717916|ref|YP_003742719.1| putative permease [Erwinia billingiae Eb661] gi|299063752|emb|CAX60872.1| putative permease [Erwinia billingiae Eb661] Length = 357 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 3/212 (1%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D + +++ + + + ++ + + +FF +D + + + + + Sbjct: 145 GDQLVKYSLASLVGIMTLAIYLVLVPLMVFFLLKDKDQMLAAISRVLPRNRGLAGQVWAE 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + +V + G + + G+ + G+ + L V+ +IP GA Sbjct: 205 MNQQV-SNYIRGKVLEMVVVGIATWIGFLAIGMNYALLLAVLVGFSVLIPYVGALAVTIP 263 Query: 265 VSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V L + + + + I + L P L + L L +V Sbjct: 264 VIGVGLAQWGLGGDFWTMIIVYLIIQGLDGNILVPVLFSEAVNLHPLVIILSVVIFGGLW 323 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G G+F L LI + + +K Sbjct: 324 GFWGVFFAIPLATLIKAVVHAWPDELNVEPKK 355 >gi|167624521|ref|YP_001674815.1| hypothetical protein Shal_2600 [Shewanella halifaxensis HAW-EB4] gi|167354543|gb|ABZ77156.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 383 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 114/335 (34%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + ++ I P+ S + +A + Sbjct: 12 KGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPR-----GLAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ I W+ + Sbjct: 67 LLMVFIVMMGLWLASVVGTSINEFSKQLPFYRDQLIEQFSWVVE--------------KL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++I E L + ++ +I+ + F + S ++ Sbjct: 113 AAFNIQISKEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFMLFESNGFSTKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L K++ R + V + + ++++G GL++G + GV + GVI Sbjct: 173 -HLALDDPDMRLKQVDRFLNSVNQYMVIKT-LVSLGTGLIIGVGLYFIGVDYALLWGVIA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A + L I+ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L F L+ +G +G+ + P+ M + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIAL 325 >gi|239826942|ref|YP_002949566.1| hypothetical protein GWCH70_1491 [Geobacillus sp. WCH70] gi|239807235|gb|ACS24300.1| protein of unknown function UPF0118 [Geobacillus sp. WCH70] Length = 340 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 115/346 (33%), Gaps = 25/346 (7%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +I I++ LY ++ +L I F + + + + ++ V+ Sbjct: 16 RIVIFSILIFILYLVRSILNIILLTFIFSFLMNGLVDFISKRIRINRKIIVLLLYAVVVS 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + E+ +L+ ++ L K Sbjct: 76 ILVYGVVKYLPVVINEISQLIKQLTEF---------------------YLKPKDNIVFNY 114 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + T ++F + ++ L I+ +I FF + I + Sbjct: 115 IIEQLKQYEITTYLNFGMTYLIKYFSDISSIGLQILLALILSLFFLLEKERIISFTNRFK 174 Query: 193 EHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +++ ++ + + +IA ++ + W+ G P LG++ Sbjct: 175 YSKISSFYDELEYFGKKFARTFGKVIEAQFVIATINMIITVACLWMMGFPQLFGLGILIF 234 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP G IS + G + + + A+ + L P L+ LP Sbjct: 235 FLGLIPVAGVIISLFPLCFIAYSIGGVMKVVYVLIMIAVVHALEAYVLNPKLMSSKTNLP 294 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 TF L+ G+ GL +G + I + + K + E Sbjct: 295 VFYTFIVLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDE 340 >gi|91200718|emb|CAJ73770.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 363 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 112/347 (32%), Gaps = 11/347 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY-----SSFISKKEESSTFLAVIATVSV 70 I +LV Y LKG + A I + P+ F+ K+ LA++ ++ Sbjct: 12 IAAFLLVCYY-LKGILISLFLAFTIAYIVDPLLDIIEKRRFLFLKKGLPRGLAIVVLLTG 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M L E V V+ L ++ K Sbjct: 71 MLFMAGGAAAYTIPKTLHGIERVGMVLKKQYPKYQENVELFIENHKDTGIAIFLKTQLGI 130 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC---LSIIFMIIALFFFYRDGFSISQQ 187 Q+ + + F ++I+ + + +D I + Sbjct: 131 QNGSEKETQEKRPGLMKFALATVKNIFQGAFGLVGIIINIVVFGVVTIYLLKDFDVIIIK 190 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L +I + + +++ G + I ++ G + GVP + ++ Sbjct: 191 CRNLLPVSKKEKIFEIFGKINENLKAFLRGQITVCIILSIIYGIGLTVIGVPLSYLIALL 250 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +IP G + I I+ +I + + + F + P +VG + Sbjct: 251 GGFGNVIPYIGIMLGLVPALILAFIQYQDITHLILVVAVFGVGQFFESTIITPKIVGTKL 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + ++ + +G LGL + ++A+ V+ E ++ K Sbjct: 311 GLHPVAIILSILICSQILGFLGLLLAVPIVAVAKVLIDEGLLRYKNT 357 >gi|311029884|ref|ZP_07707974.1| hypothetical protein Bm3-1_04891 [Bacillus sp. m3-13] Length = 352 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 105/308 (34%), Gaps = 2/308 (0%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ ALI P+ ++ + I + + + FL + E Sbjct: 31 VPIIIALITALFLEPLVRLLQARAKLKRNLSVFIVFLLFLTSIGIIGYFLTTKVITEGIN 90 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV V R + F + Sbjct: 91 LVENAPSYINEVNRVWRDFQSDMNNASEDLPPEFVTEISLQVDKFLYDLRIYLTDLFNIQ 150 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 +Y +S + +IALF F D + L S + A K +S + VI Sbjct: 151 NVKNIFTNIPNYLVSFLVYLIALFLFLIDMPRLKAGLYSHLKEETAAKVKFMSSRLSYVI 210 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 F ++++ + + I ++ IP G+ + +I+ Sbjct: 211 FGFFKAQFLVSVIIFFTSLIGLLFIAPEVALLMSFIIWLIDFIPIIGSIVILGPWAIFHF 270 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G+I T L + AI L ++ +T+ P ++G I L L T + G++ +G+LG + Sbjct: 271 ITGDIGLGTQLSIL-AIVLLVIRRTVEPKVMGSHIGLSPLATLIAMYLGLKLLGILGFIV 329 Query: 331 GPVLMALI 338 GP+L+ Sbjct: 330 GPLLLIAF 337 >gi|282896491|ref|ZP_06304511.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281198597|gb|EFA73478.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 359 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 122/341 (35%), Gaps = 15/341 (4%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +W+ + ++VSLY L + + +A+++ T + + ++ Sbjct: 2 KLGQWIGLIALVVSLYILWQLREVLLLIFAAVVLATTLNRL-ARTCQNLGIKRGLAVFLS 60 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + + +EL +V + V W+ + + Sbjct: 61 VMFFLVGIVAFFWVIVPPFVHQFQELTLRVPQGFER---VNTWIDE--QRSHIPQELEPV 115 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L ++ + + + + F L L+I+ +++ F + + + Sbjct: 116 IPDLNRLIAEAQPLI-----NRVLGNSFAFVSGSLVLVLNILLVLVLTAMFLTNPPAYQK 170 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + I + G I GL+ + GV + +ALGV Sbjct: 171 LFVRLFPSFYRRRVEGILNQCEDSLERWLTGAFIAVCVVGLMSLIGLSILGVKAALALGV 230 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +M +IP P ++ + + + + + + + + P ++ + Sbjct: 231 LAGLMNLIPNLGPTMSVVPAMAIALLDSPWKPIFVLILYFFIQQLESNFITPMVMAHQVS 290 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L T + V G LGLF+ + + ++A IW + ++ Sbjct: 291 LLPAVTLISQLFFVTFFGFLGLFLA-LPLTVVAKIWIQEVL 330 >gi|326317957|ref|YP_004235629.1| hypothetical protein Acav_3160 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374793|gb|ADX47062.1| protein of unknown function UPF0118 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 434 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 4/188 (2%) Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW--KKISRIVPKVIRSTF 215 M + + ++ FF G ++L + ++ + I+ Sbjct: 231 MGLVSAAGQLTVVVFLTFFSLASGNLFRRKLVRIAGQSLERRKITMEVLDDITGQIQRYL 290 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KG 273 L ++ G+ G AY L G+ + GV+ ++ + P I T S + G Sbjct: 291 LVQVATSVLVGIGTGVAYALLGLENAAVWGVVAGVLNLAPYVGSIVVTGASALVAFLQFG 350 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A + + IV L P+L ++ + F ++ GL G+ +G Sbjct: 351 TVDMALAVGGASLLIHTIVGNLLTPWLTSRTSRMSPVAVFVSVLAWGWLWGLWGVLLGIP 410 Query: 334 LMALIAVI 341 +M ++ + Sbjct: 411 VMMVVKAV 418 >gi|170743266|ref|YP_001771921.1| hypothetical protein M446_5162 [Methylobacterium sp. 4-46] gi|168197540|gb|ACA19487.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 382 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 105/317 (33%), Gaps = 8/317 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ML + + ++ +++ LY L+ P ++ + + P+ + Sbjct: 1 MLQRRATIGLAVLAVVVFLLYELRDVLVPFVAGAALAYVLDPVADRLERLGIGR-----L 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 AT ++ +F++ LL + + + A + + + G Sbjct: 56 SATFLILAVFVLGLLLALIIAVPLAARQIGALAAALPGVVSRIQAIIAENAGPLLERAGG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + + ++ + F+ D + Sbjct: 116 AGTLQDLQASVGRLVGQAGSFLVNLAGSLWSGSQAVVGILSLLVVTPVVAFYLLIDWDRM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + LD + I+R + + I S G +++ + G +L G+ V + Sbjct: 176 TATLDGWVPPRHRDTVRLIARDIDRAITSFIRGQSLVCLLLGTFYALGLFLIGLNFGVLI 235 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLV 301 G++ + IP G+ F + +++ L G + F+ L+P LV Sbjct: 236 GLLAGFLTFIPYVGSLTGFLLSTGVAVVQFWPDWPWILATLGVFLVGQFMEGNVLQPKLV 295 Query: 302 GGPIKLPFLPTFFGLVG 318 G ++L + F L+ Sbjct: 296 GDAVRLHPVWLMFALLA 312 >gi|238922451|ref|YP_002935964.1| hypothetical protein EUBREC_0025 [Eubacterium rectale ATCC 33656] gi|238874123|gb|ACR73830.1| protein of unknown function UPF0118 [Eubacterium rectale ATCC 33656] Length = 437 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 109/332 (32%), Gaps = 27/332 (8%) Query: 14 WMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKK-------- 55 + + + +LY +GF P++ L++ + P+ Sbjct: 46 FAVSILFFFALYRFEGFAGIWSKLLAAAMPIIMGLVLAYLMNPVMLWLERCFKKLLSKKM 105 Query: 56 ----EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + A+ T SV+ L + L + + + + + Sbjct: 106 KSESKLRKVSRALAITGSVIILVAIISLLIAAIVPSVIASISGLMKTLPNDVAAFINMIK 165 Query: 112 DIPGGM-WASELWTKHLSHP-QSLKILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLS 166 + G +EL + L + ++ + L ++ + + ++ + Sbjct: 166 NGNFGDSKIAELASTGLQNATDYIENYATEKLIPEAQKYVAQITTGVISIVRGLFNFIIG 225 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 II M+ + + + ++ + + R ++ G I ++ G Sbjct: 226 IIVMVYVMSIQETLAGQSKKIIYAVCKPKTGNIIIETIRKTNEIFGGFISGKIIDSLIIG 285 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ + +PS V + VI + +IP P S+ +++ + ++A L ++ Sbjct: 286 VIAYFGCLILRIPSSVLVAVIIGVTNVIPVFGPFIGAIPSLLIVVIQSPWHALYLLIFIV 345 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + P ++G L F ++ Sbjct: 346 VLQQVDGNIIGPKILGSSTGLSTFWVMFAILI 377 >gi|86607588|ref|YP_476350.1| hypothetical protein CYB_0086 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556130|gb|ABD01087.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 376 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 112/320 (35%), Gaps = 8/320 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ V +A+++ + + VI +++V+ I+ L + Sbjct: 20 WQIRQILLLVFAAIVLAVALDTLAQ-IPQRYGFRRGPSIVITSLTVLVAAILVGLIVVPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ L + V A + R + + SL + ++ Sbjct: 79 LAEQLRWLFTDGVPAG--IVQAQRLFESLILSLPTDIELPTLRELANSLVPQATELVRQV 136 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F F + FG L+++F+II D + S+ S+ + + I Sbjct: 137 RDFFSESFTAFFGT-----LLNLLFVIILTILLLADPQAYSRAFVSVFPAFYRPRIRYIL 191 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R +G+ + L+ G W+ GVP +A V+ + IP P Sbjct: 192 KRCELALRGWLMGILFTSTLVMLLSGIGLWILGVPLILANAVLAGLFNFIPNIGPTLSVV 251 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + + + P ++ + L T V G Sbjct: 252 APMLVALTDAPWKSLAVLGLYILIQQLESSVFTPIVMSRQVSLLPALTLVAQVTSAFFFG 311 Query: 325 LLGLFIGPVLMALIAVIWKE 344 +LGLF+ L A++ V +E Sbjct: 312 VLGLFLAVPLAAILQVWIQE 331 >gi|104773948|ref|YP_618928.1| hypothetical protein Ldb0899 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423029|emb|CAI97720.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 357 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 27/354 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAV 64 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 10 KNNIHLRRATVLVMIILALYYVRAMMNTILLTFIFTYLILHLVRFVQGKFKHVSDKLIVA 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L L + + ++ ++ V+ Q W Sbjct: 70 LTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQTN----------------DVGWL 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H + + +K++ F +S + ++ FF+ + + Sbjct: 114 MTQLHKHVSEKTISSQVKSSLTALTAAL-----KGFGSVTMSFVMALVLSFFYTIELKEM 168 Query: 185 SQQLDSLGEH----LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S + F R +IAI + + +P Sbjct: 169 QTFSQSFLKSDLFGWFFEDIAYFGRKFTNTFGVVLEAQFLIAICNTTLTIVCLAIMKMPQ 228 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ALG++ I +++P G IS +S+ G I + + + A+ + L P Sbjct: 229 IFALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPK 288 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +LP TF L+ G G GL + + I + K+ K Sbjct: 289 FMSSKTELPIFYTFVALLFGEHFFGTWGLIVSVPIFTFFLDILGVKNINSKQEK 342 >gi|29375932|ref|NP_815086.1| hypothetical protein EF1365 [Enterococcus faecalis V583] gi|227518629|ref|ZP_03948678.1| permease [Enterococcus faecalis TX0104] gi|227553160|ref|ZP_03983209.1| permease [Enterococcus faecalis HH22] gi|255972922|ref|ZP_05423508.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255975976|ref|ZP_05426562.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256762372|ref|ZP_05502952.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256853002|ref|ZP_05558372.1| permease [Enterococcus faecalis T8] gi|256958855|ref|ZP_05563026.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256962051|ref|ZP_05566222.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256965249|ref|ZP_05569420.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257078887|ref|ZP_05573248.1| permease [Enterococcus faecalis JH1] gi|257082666|ref|ZP_05577027.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257085375|ref|ZP_05579736.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257086870|ref|ZP_05581231.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257089759|ref|ZP_05584120.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415975|ref|ZP_05592969.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257419177|ref|ZP_05596171.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257422745|ref|ZP_05599735.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294779557|ref|ZP_06744951.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300860372|ref|ZP_07106459.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29343394|gb|AAO81156.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227073924|gb|EEI11887.1| permease [Enterococcus faecalis TX0104] gi|227177686|gb|EEI58658.1| permease [Enterococcus faecalis HH22] gi|255963940|gb|EET96416.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255968848|gb|EET99470.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256683623|gb|EEU23318.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256711461|gb|EEU26499.1| permease [Enterococcus faecalis T8] gi|256949351|gb|EEU65983.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256952547|gb|EEU69179.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256955745|gb|EEU72377.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256986917|gb|EEU74219.1| permease [Enterococcus faecalis JH1] gi|256990696|gb|EEU77998.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256993405|gb|EEU80707.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256994900|gb|EEU82202.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256998571|gb|EEU85091.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157803|gb|EEU87763.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257161005|gb|EEU90965.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257164569|gb|EEU94529.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294453347|gb|EFG21755.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|295112886|emb|CBL31523.1| Predicted permease [Enterococcus sp. 7L76] gi|300849411|gb|EFK77161.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|323480600|gb|ADX80039.1| conserved hypothetical protein [Enterococcus faecalis 62] gi|327535006|gb|AEA93840.1| membrane protein [Enterococcus faecalis OG1RF] Length = 350 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 119/358 (33%), Gaps = 23/358 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + R+ ++ +I+ LY + +L I + + + + + + ++ Sbjct: 8 IQNERLRRFCVLALIIFVLYLSRSMITTILLTFIFTYLAVRLVHFVQRYMKIPTIVIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ L + + + + ++++ VV Q + Sbjct: 68 TYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQSPHTDTNQVLQFIDQYLEKSNLLS 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L + S+ I R+ G + L + +S I FFF + ++ Sbjct: 128 QLQNGASM---------------ILRYIQDIGAVGLSFVMSFILS----FFFMIEKKQMA 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + F +++ I K + + IA+ ++ A + G Sbjct: 169 DFSKLFLKSDFDWFFQDIYYFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLP 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I++++P I +S +G + + + I L P + Sbjct: 229 SLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ R G+ GL +G + + K + + + N Sbjct: 289 SSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 346 >gi|16803459|ref|NP_464944.1| hypothetical protein lmo1419 [Listeria monocytogenes EGD-e] gi|47095370|ref|ZP_00232980.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|224499726|ref|ZP_03668075.1| hypothetical protein LmonF1_08559 [Listeria monocytogenes Finland 1988] gi|224501639|ref|ZP_03669946.1| hypothetical protein LmonFR_03832 [Listeria monocytogenes FSL R2-561] gi|254827707|ref|ZP_05232394.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254898415|ref|ZP_05258339.1| hypothetical protein LmonJ_01330 [Listeria monocytogenes J0161] gi|254912094|ref|ZP_05262106.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254936421|ref|ZP_05268118.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284801805|ref|YP_003413670.1| hypothetical protein LM5578_1560 [Listeria monocytogenes 08-5578] gi|284994947|ref|YP_003416715.1| hypothetical protein LM5923_1512 [Listeria monocytogenes 08-5923] gi|16410848|emb|CAC99497.1| lmo1419 [Listeria monocytogenes EGD-e] gi|47016191|gb|EAL07114.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258600086|gb|EEW13411.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258609013|gb|EEW21621.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284057367|gb|ADB68308.1| hypothetical protein LM5578_1560 [Listeria monocytogenes 08-5578] gi|284060414|gb|ADB71353.1| hypothetical protein LM5923_1512 [Listeria monocytogenes 08-5923] gi|293590062|gb|EFF98396.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 345 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R + +I LY L+ +L I + + + + + + ++ Sbjct: 8 LQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + I + ++ +LV Sbjct: 68 LYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT---------------------DS 106 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L+ F + + +++ ++ FF + Sbjct: 107 NNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLV 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTISH 344 >gi|282600569|ref|ZP_05979073.2| putative membrane protein [Subdoligranulum variabile DSM 15176] gi|282572006|gb|EFB77541.1| putative membrane protein [Subdoligranulum variabile DSM 15176] Length = 424 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 116/330 (35%), Gaps = 13/330 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE---SSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +P ++I F P+ F + ++A++ + V L + L +L ++ Sbjct: 69 LSPFAGGVVIAFVLNPMAMWFHRVLLKQDPRLRWVAILLSYIVAALLLALLAWLVVPQII 128 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + G+ G+ + ++ L + Sbjct: 129 SSIAILFNSLPGYFEGLQNTLLYLQDHYGLQMQNVLRILDDSEAMMRE-----LYNVAVA 183 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KI 203 +P+ + G + ++ +++ + + + + Q+ +L P +I Sbjct: 184 AMPQIVTTIGSVASNF-VAVFTAVASSVYMLSGKDKLIHQIKTLVHAFLPESVASNTLRI 242 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + F+G I + G++ + + + + V I +IP P Sbjct: 243 CHYANENFTGFFVGKIIDSAIIGVLTFVLMSILRLDFALLVSVFVGITNIIPVFGPFIGA 302 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 SI++L+ + A + + + P ++G I + L F +V G Sbjct: 303 IPSIFILLLVDPVQALIFAVLILFIQQLDGNFIGPKILGQSIGISSLWVLFSIVVGGDLF 362 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL+G+ +G L A + + E ++ + + + Sbjct: 363 GLVGMVVGVPLFATLYGLLHEVVVYLLDRR 392 >gi|56808363|ref|ZP_00366119.1| COG0628: Predicted permease [Streptococcus pyogenes M49 591] Length = 382 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 110/291 (37%), Gaps = 8/291 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + ++ +S + + I ++++ + Sbjct: 87 ICLLLAYLTFFILITWIISIVIPDLITSISTLTKFDTITIQ--EVVNNLEHNKLLARTIQ 144 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 ++ L + + F+ + + + +++ + + Sbjct: 145 -YIGGDGKLTETIANYSQQLLKQFLTVLTNILTSVTVIASAIINLFISFVFSLYVLASKE 203 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q ++L + Y K+I ++ + F+ T+ A+ G + S ++ +P Sbjct: 204 DLCRQGNTLVDTYTGKYAKRIHYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLP 263 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 264 FAGTIGVLVAFTALIPVIGASIGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPK 323 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +VGG I LP + + G G++G+ I L A + + K++I + Sbjct: 324 VVGGSIGLPAMWVLMAITIGASLKGIVGMIIAVPLAATLYQVIKDNIQKRQ 374 >gi|299538219|ref|ZP_07051504.1| hypothetical protein BFZC1_19470 [Lysinibacillus fusiformis ZC1] gi|298726421|gb|EFI67011.1| hypothetical protein BFZC1_19470 [Lysinibacillus fusiformis ZC1] Length = 363 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 96/293 (32%), Gaps = 7/293 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 LK F P+L ++ + + PI F+ K+ + ++ + + + Sbjct: 36 ILKAIFVPLLLGGVLYYVTEPI-QRFLEKRRFPRWGSILTIVFGLIAMIGIFGWIIGNPI 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LV + + + L++ + + + + Sbjct: 95 AEQVNKLVKNAPMISTSISTSIQQLTEY-VTQNKDNFPQELNDVIKKMANSVQDIAVVTS 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F+ S + L + F+ F +D + + + KK Sbjct: 154 KGFVSFLQSIVSVSLLAILIPFFFI-----FMLKDHEKFAPSIYKYFSGERQQWVKKTLS 208 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + V+R+ G I+ L++ Y + G+ + L + M MIP P A Sbjct: 209 EIDDVLRTYIQGQLQISFLLALIMYVGYLIIGLDYSLLLVIFAFFMNMIPFIGPWIAFAP 268 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + + + + + + I + P ++G + + L ++ Sbjct: 269 ALIVAVIQDPILVVWVSVVTLVAQQIDSNFITPNVMGKSLDIHPLTVITIILA 321 >gi|148653241|ref|YP_001280334.1| hypothetical protein PsycPRwf_1439 [Psychrobacter sp. PRwf-1] gi|148572325|gb|ABQ94384.1| protein of unknown function UPF0118 [Psychrobacter sp. PRwf-1] Length = 366 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 117/328 (35%), Gaps = 9/328 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P L A I+ + P+ + + +++ F L +L + Sbjct: 31 PVIVPFLCAFILAYLFNPVVTRMARFMP--RWLAIIFVYTAIIVGFGALLWWLLPTLWEQ 88 Query: 89 MKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + + R W+++ + H+ +L L++ + + Sbjct: 89 LQSAWEYLPRVVEWYNSDIRVWVNN--NSQFHLPPLESHIVSETALDYLNKNYNVADAQS 146 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + + G+ ++ ++ + I F+F + Q +I Sbjct: 147 FFMQVLNS-GLAVINSTGLVVLVPILTFYFLFNWNQRLQTWKKALPKASAPKIIEIVHDC 205 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 + + G ++ I G+V L G+ + +G++ I + +P G + F A Sbjct: 206 DDALMAFIKGQLLVMILLGVVYAVQLQLIGLDLGLIIGMVAGIASFVPYLGFGLGFIAAI 265 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I L + + + GA + L+P L+G I L L F ++ G MG Sbjct: 266 IAGLFQFGMDWVHLGLIAGAFMVGQAVEGYVLQPLLLGDKIGLSPLWVIFAVLAGASLMG 325 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ I + A++ V++ A K+ Sbjct: 326 FVGMLIALPVSAILNVLFHHGYEAYKQT 353 >gi|13471741|ref|NP_103308.1| hypothetical protein mll1810 [Mesorhizobium loti MAFF303099] gi|14022485|dbj|BAB49094.1| mll1810 [Mesorhizobium loti MAFF303099] Length = 662 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 108/338 (31%), Gaps = 22/338 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LYF + F P+ AL++ F P+ S+ K+ AVI +V L + Sbjct: 44 LYFGREVFLPIAIALLLTFALAPLVSAL--KRVGIPRIAAVIVSVLSAFAA---LALFSF 98 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ EL + + + + R L + G + + + L Sbjct: 99 VVATQVSELAQNIPVYQTNILAKIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPA 158 Query: 144 NGIDFIPR---------------FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 D PR + S +I+ + F + + + Sbjct: 159 ATPDKQPREPVPVEIVARERPLEVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRF 218 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + K + L ++ I + + W+ G+P+ + G++ Sbjct: 219 IRLVGYGDLHRTTEALQDAAKRVGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLA 278 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIK 306 + +P P + ++L + + L+ + + + P+L G Sbjct: 279 LALRFVPYIGPAIGMLLPLFLALAVAPGWSLVLWTAALFVVMELVTGNVVEPWLYGSRTG 338 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L + G LGL + L + V+ + Sbjct: 339 LSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRH 376 >gi|312139534|ref|YP_004006870.1| integral membrane protein [Rhodococcus equi 103S] gi|311888873|emb|CBH48186.1| putative integral membrane protein [Rhodococcus equi 103S] Length = 387 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 113/360 (31%), Gaps = 21/360 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL---VSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 R L + I+ + VS + ++ F + A + T P+ + Sbjct: 21 RRADLRSLRVAIVYILLAVAAYQVSGWLFHHIRDFLGMLFLAWLASVTIEPVVDRLE-RT 79 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + I + ++ +L+ +P L+ + Sbjct: 80 GMRRGLGTGLVLFGTIVFAIGFIAIFGALLAEQLAQLLG----------ALPDALTRV-- 127 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 WA+ + + + L ++ ++ + P + +++ +F Sbjct: 128 TDWANRKFGTDFATGKDLINITPETVRDLAEKYTPGVLGVV-STLVGVIFQAATVLLFVF 186 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + G + + + S + I + I+A + G + + Sbjct: 187 YMSAQGPQLRRTISSWFPARQQKVIASVWEISVDKAGGYVVSRVILAAFSAVATGIFFLI 246 Query: 236 AGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + L + T +++ IP + + +A + L+G I + Sbjct: 247 IGVPYWLPLAIWTGVVSQFIPTLGTYLAIGLPAVIAAAAQPLDAVWVILFGTAYQQIENY 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L P + + + F ++ G G +G + ++A+I I + + +E Sbjct: 307 ILHPRITSRTVSIHPAVAFGSVIVGASLFGAIGALVSVPVVAVIQAIVETYGHRYELVQE 366 >gi|118086653|ref|XP_419042.2| PREDICTED: similar to chromosome 9 open reading frame 5 [Gallus gallus] Length = 901 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 75/193 (38%), Gaps = 9/193 (4%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPK 209 G L++ LS++ + LF+ + + + SL P I + V + Sbjct: 668 FHSGTALLNFVLSVVIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEE 727 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 IR F +A GL + + G+ + AI+ +P G + + Sbjct: 728 AIRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAIPAVLD 787 Query: 269 LLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 788 LWLVQGEGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEG 844 Query: 328 LFIGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 845 AIIGPILLCILVV 857 >gi|89094851|ref|ZP_01167784.1| membrane protein, PerM family protein [Oceanospirillum sp. MED92] gi|89080906|gb|EAR60145.1| membrane protein, PerM family protein [Oceanospirillum sp. MED92] Length = 363 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 117/348 (33%), Gaps = 12/348 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++++ L+ + L APV + +I+ F + ++ Sbjct: 15 DEEALLLFVLLGASLIVILTLGQALAPVFAGIILAFLMQGGVNRLRQLNVPH-LLSVILV 73 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + LL + + L +++ V L + G + E + Sbjct: 74 FLAFVGGLGALLLIVMPLAWKQSVNLFNELPGIMSEIQSVLLLLPERYPGFISEERVLEL 133 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + ++ F+ + + ++ + I +FFF +DG S+++ Sbjct: 134 INLAAAEL--------SQMGQWVVTFSLNSITSIIALLIYLVLVPILVFFFLKDGSSLTR 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S ++ + I + G I I G V + G+ LG+ Sbjct: 186 WWVSFLPE-KRDMMTQVWHEMDDQIANYIRGKVIEIIVVGSVTYITFIFLGINYAALLGI 244 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + +IP GA + V++ + L + I + L P L Sbjct: 245 LVGLSVLIPYIGAALVTLPVALIGFFQWGWSSEFMYLMIAYGIIQALDGNVLVPLLFSEA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L I A ++ Sbjct: 305 VNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLFKAILSAWPKAKQQP 352 >gi|302391202|ref|YP_003827022.1| hypothetical protein Acear_0410 [Acetohalobium arabaticum DSM 5501] gi|302203279|gb|ADL11957.1| protein of unknown function UPF0118 [Acetohalobium arabaticum DSM 5501] Length = 348 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 123/324 (37%), Gaps = 9/324 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LY ++ P + A+ I + P + + + S ++ +FI+ + LF Sbjct: 23 FLYLVRIVLLPFVLAIFIVYLVNP-FVKLLINRGVSRNLA-------LVLIFIIVVGGLF 74 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 G L+ ++ + I + K S Q + + ++ Sbjct: 75 LVGFFAAPPLIEELNALANRIPQYSIEIQKIIDSVTQKYQRFKLPSTFQLVVDNAIERIQ 134 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F+ R + L S+I I F+ +D +I + +L K+ Sbjct: 135 NIILQFVERTTEVI-IGILSRFFSLIMAPILAFYMLKDIETIKKNFWTLIPKESRKDIKQ 193 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + KV+ G ++++ GL+ +L + ++ +G+ IM +IP + Sbjct: 194 LLKKIDKVLIDYLKGQLLVSVVVGLLSMLGLYLLDINFYLIIGIFAGIMNLIPYLGVVFG 253 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++++ + + + + A + + P +VG + L + F L+ G Sbjct: 254 ILPAVFVASFKSFQSILEVIVMFAFVQQLEGSLISPKIVGDKVGLHPILIIFSLLVGGEL 313 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 +G++G+ + + +I VI I Sbjct: 314 LGIIGMLLAVPVAGIIKVILNHYI 337 >gi|56750445|ref|YP_171146.1| hypothetical protein syc0436_d [Synechococcus elongatus PCC 6301] gi|81299922|ref|YP_400130.1| hypothetical protein Synpcc7942_1113 [Synechococcus elongatus PCC 7942] gi|56685404|dbj|BAD78626.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168803|gb|ABB57143.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 363 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 128/353 (36%), Gaps = 11/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L ++ + + +IL+ L+ L+G ++SA+++ + PI + + Sbjct: 6 RRISLTTDSLLLIVGLSLILLMLWQLRGLILILMSAIVLAASIAPIVNQLEQWRLPR--- 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + L L +L ++S++ + + + + + Sbjct: 63 -----WLGVLVAYGGLLAILTGASLLVGPLVISQIQTLLRQLPNLVERVELLSIDIAEQL 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 PQ + N + R + L S++ ++ + D Sbjct: 118 DLQDSPLLPQLVNPQEVAGWVINTSQQLLRQSYGITRGILGGFFSVVLGLLLSSYLVADS 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PS 240 ++ + L + + V + + + G ++++ G+ + G+ Sbjct: 178 KTLGRGFVRLFAAPWDDRLAALLGPVGQRMGAYIRGRVLVSLLLGIAIALGLRTLGLGDY 237 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRP 298 + LG I +IP G + L +G+ L + + ++ L P Sbjct: 238 AIGLGAIAGFTNLIPFLGPFLGAIPALFVALAQGDSAWLFLWVLLLFVIIQNLESYVLDP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVG + + L ++GGV+ +G++G I P +A A++ + + K+ Sbjct: 298 LLVGAAVGIHPLYQLLAVLGGVQLLGIVGAVIAPPWIAGGALLLERLYLQPKD 350 >gi|167762104|ref|ZP_02434231.1| hypothetical protein BACSTE_00455 [Bacteroides stercoris ATCC 43183] gi|167700063|gb|EDS16642.1| hypothetical protein BACSTE_00455 [Bacteroides stercoris ATCC 43183] Length = 374 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 119/343 (34%), Gaps = 17/343 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L P A +I + +P+ + F K + + +++ + + + +L M Sbjct: 31 LSSVLLPFFIAWLIAYLVYPLVTFFQYKLKLRNRIVSIFCALLTLLIVGAGAFYLLVPPM 90 Query: 87 LE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ ++ L+ + + VP LSD + T+ + L L E + Sbjct: 91 IQECGRVQTLLVQYFSHGTYNSNVPTSLSDFLRDNIDVKFITELFNKENLLDALKEAVPR 150 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + S + I ++ +F D SI++ L + ++ Sbjct: 151 ------LWSLLSDSVDLLFSVFTIFIILLYVIFILL-DYESIAEGWTHLVPMKYRSFVVG 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I V + F G +A+ G++ + + P + LG+ + M+P I Sbjct: 204 ILNDVKVGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNMVPYLQIIGL 263 Query: 263 TAVSIYLLI----KGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I ++ G+ F + I D + P ++G L L Sbjct: 264 VPTIILAILKASDTGDNFWIIIASAMAVFIVVQTIQDGFIVPRVMGKITGLNPAIILLSL 323 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 MG+LG+ I L L+ ++ I+ + + S++ Sbjct: 324 SIWGSLMGMLGMIIALPLTTLMLSYYQRFIINRENIHKTESAD 366 >gi|297623498|ref|YP_003704932.1| hypothetical protein Trad_1266 [Truepera radiovictrix DSM 17093] gi|297164678|gb|ADI14389.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 400 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 103/312 (33%), Gaps = 11/312 (3%) Query: 16 IMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEES-----STFLAVIAT 67 ++ + +++F +G + A I + + P+ F ++ L + A Sbjct: 20 LLLLASGAVWFFYETRGVWLLFFLAYTIAYLTNPLTLWFQRRRLPRWLGVGVVLLLLTAL 79 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ I + M E+ L ++ + V R L P + + + Sbjct: 80 FALASFVIAQFVHQASLFMQELPNLNEPLLRWYEGLPEVLRGLVPTPVVDFLGQPGAQAG 139 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSI 184 + + I + + +F++ + +++ L + ++ F D I Sbjct: 140 AELGAELIAPFEGMVGYLGGVLTQFSANVFALLVNFVGGLLQAVVLLFLTLFLLYDFNGI 199 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L + + + + + G +IA+ G + L GVP + Sbjct: 200 NRTFLRLIPERYREGGLETLQRLDVSVGGYIRGQILIALVVGFSIWLGLTLLGVPLAFGV 259 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G + A+ ++P PI + L + + F+ + P + Sbjct: 260 GFVAAVFNVVPFLGPIVAFIPAGLLALTVGWPYVLATAALFMVINFLDGNVISPIIFSKT 319 Query: 305 IKLPFLPTFFGL 316 +K+ L + Sbjct: 320 VKVHPLTVILSV 331 >gi|182437581|ref|YP_001825300.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466097|dbj|BAG20617.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 368 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 103/299 (34%), Gaps = 21/299 (7%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ I++ + + A + +++ + + + ++V + A Q Sbjct: 58 PVHRWLIAR-GLNRSLAAGLTCAALVAVVGGAGYIVVTALIDSGDQIVDSLKDAGQ---- 112 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W+ L + ++ L ++ ++ G S + Sbjct: 113 ---WV--------VDHLDIEGATNVDDLADNAKGLVEKFGASAAGGLLSGI-SLVGSLVA 160 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + ++ FFF RD ++ + + R + + G T IA+ + Sbjct: 161 TSVLALLLTFFFLRDSDRAVNLAHAVAPRGTGDLVEAMGRRAFEAVEGFMRGTTFIALID 220 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + + VP V LG + + A IP AV++ L+ + L+ G Sbjct: 221 AVCITVGLLILDVPGAVGLGALVFVGAYIPYLGAFISGAVAV-LVALADRGFVIALWALG 279 Query: 286 AI--ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + + L+P + +++ L G GLLG+ + P+ A V+ Sbjct: 280 VVLAVQVLEGHVLQPMIQSRTVQMHPAMIMIALTAGASVAGLLGMLLAVPLCAAAFGVL 338 >gi|325672582|ref|ZP_08152278.1| hypothetical protein HMPREF0724_10059 [Rhodococcus equi ATCC 33707] gi|325556459|gb|EGD26125.1| hypothetical protein HMPREF0724_10059 [Rhodococcus equi ATCC 33707] Length = 387 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 113/360 (31%), Gaps = 21/360 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL---VSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 R L + I+ + VS + ++ F + A + T P+ + Sbjct: 21 RRADLRSLRVAIVYILLAVAAYQVSGWLFHHIRDFLGMLFLAWLASVTIEPVVDRLE-RT 79 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + I + ++ +L+ +P L+ + Sbjct: 80 GMRRGLGTGLVLFGTIVFAIGFIAIFGALLAEQLAQLLG----------ALPDALTRV-- 127 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 WA+ + + + L ++ ++ + P + +++ +F Sbjct: 128 TDWANRKFGTDFATGKDLINITPETVRDLAEKYTPGVLGVV-STLVGVIFQAATVLLFVF 186 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + G + + + S + I + I+A + G + + Sbjct: 187 YMSAQGPQLRRTISSWFPARQQKVIASVWEISVDKAGGYVVSRVILAAFSAVATGIFFLI 246 Query: 236 AGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + L + T +++ IP + + +A + L+G I + Sbjct: 247 IGVPYWLPLAIWTGVVSQFIPTLGTYLAIGLPAVIAAAAQPLDAVWVILFGTAYQQIENY 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L P + + + F ++ G G +G + ++A+I I + + +E Sbjct: 307 ILHPRITSRTVSIHPAVAFGSVIVGASLFGAIGALVSVPVVAVIQAIVETYGHRYELVQE 366 >gi|226939438|ref|YP_002794511.1| integral membrane protein [Laribacter hongkongensis HLHK9] gi|226714364|gb|ACO73502.1| integral membrane protein [Laribacter hongkongensis HLHK9] Length = 367 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 121/342 (35%), Gaps = 15/342 (4%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R ++ ++ L+ L P +A + + + P+ + + T + + Sbjct: 15 RLLLALAVVFCLWLVWHLADVLMPFAAAFALAYMAVPVVDRL-GRMGVNRTLATNLMLLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++ +L + + +++ LV ++ + WL Sbjct: 74 AIALVVLVMLLVIPMFVSQIQGLVDRL-------PGLVDWLERTVSPRIHEFFGITVHFD 126 Query: 130 PQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S+K L + + + + + G+ L + +++ + F+ RD ++ Sbjct: 127 VNSIKTGLAAHLGSVRSALANLLPALTSQGIALLTFLTNVLLTPLLAFYLLRDWHTLLAS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ L + A + + ++ G + + G + G+ S A+GV+ Sbjct: 187 VERLLPPRWRAGVTSLCGQIDHMVGEYLRGQLAVMLIMAAFYGGGWLAVGLDSGFAIGVV 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPI 305 ++ IP ++ I L +W + + + P LVG I Sbjct: 247 AGLLVAIPYVGAFIGVLLATMAAILQYGTLPEMLMVWSVYAVGQTLEGFVITPRLVGDRI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L F L+ G +G+ + A++ V+W+E++ Sbjct: 307 GLHPALVIFALMAAGSLFGFVGVLLALPASAVLIVLWREALA 348 >gi|125973937|ref|YP_001037847.1| hypothetical protein Cthe_1423 [Clostridium thermocellum ATCC 27405] gi|125714162|gb|ABN52654.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] Length = 368 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 115/342 (33%), Gaps = 17/342 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS------TFLAVIATVS 69 IM + + K FF + A ++ + + ++ + + Sbjct: 25 IMRAVWKFIVLFKPFFMGIAVAFVLNRPCMAVERFLNKRLFKNRLKVLVRGIAITVTYLV 84 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + + F+ + ++ +S + + + LS++ G LS Sbjct: 85 VLLLITLIISFIIPELIKSIQVFLSNMGAYIDNFRDLTNELSELLGLERID------LSS 138 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + L ++ + +P+ S L + +++ ++ + + Q Sbjct: 139 LDKLILEYTNRLGSSLTELMPKIIS-ITTGVLSFFATLVITVVFSIYILAGKERLIGQCK 197 Query: 190 SLGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + P + R+V V G A G + + + + Sbjct: 198 KVFSTYLPECLYKKGAYVYRVVVDVFNKYIYGQLAEAFILGSLCFIGMVIFRFEYALLIS 257 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ A+ A++P + LL+ + A ++ + + + + P +VG + Sbjct: 258 VLIAVTALVPYFGAYIGGFCAFMLLLMISPTKAIWFLVYLVVLQQLENNLIYPRVVGSSL 317 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LP + + G G +G+ G + ++ + + ++ Sbjct: 318 GLPGIWVVLAAIVGAGVGGPIGVLTGVPIATVLFTLLRNDVL 359 >gi|298245661|ref|ZP_06969467.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297553142|gb|EFH87007.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 439 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 121/335 (36%), Gaps = 21/335 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L ++ + F P+ + + V+AT+ V + + L +L Y Sbjct: 37 IIILLLSMAVAFLLTPLVNFLVKYHVPR-----VVATLLVYVVVLGALGYLSYLLAA--- 88 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF-- 148 S + + + + IP + + PQ + +++ +F Sbjct: 89 ---SLIAQSLAFSDTIQSYAKAIPDNYANFIKYLNDIKIPQKNIDDTIASVQSKANEFAF 145 Query: 149 -IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + A F + ++ ++I +++ F+ DG I L SL F + Sbjct: 146 TLTNNALSFVTVLVNAFINIFLIVVLSFYLTVDGKRIRDSLVSLSPKRFLPNVLLFEDAL 205 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWL---AGVPSHVALGVITAIMAMIPGGAPISFTA 264 +V+ + G +A+ G+++G + G + GV+ + IP P + Sbjct: 206 SRVVGNYIRGQLTLALIVGILVGVICAVNPPLG-KYALICGVLAFLFETIPMVGPALASI 264 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L + L + G V L P +VG + L + L+ G + Sbjct: 265 TPLLLSLLLPDPFPRTLIVAGCFVALQVIESNILGPRIVGHAVGLHPVAAILSLLIGAQL 324 Query: 323 MGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKI 356 G+ G + PV+ AL V+ A E+ ++I Sbjct: 325 FGVFGALLATPVVAALWVVVASIYRSARGESADQI 359 >gi|302385667|ref|YP_003821489.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] gi|302196295|gb|ADL03866.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] Length = 375 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 114/323 (35%), Gaps = 16/323 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P + II + P+ + + +V+ V+V+ L I L FL + E Sbjct: 34 FFLPFVIGWIIAVIANPLVRFLEKRLKIVRKHSSVMIVVAVLALIITVLYFLLSKLISEA 93 Query: 90 KELVSKV--------VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + + + V L +P + S + +H + Sbjct: 94 AGFAGDIPKYYESAWIEIQKLLLQVEGLLQFLPENIQVSV--NQFFTHIGEYLN----VM 147 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 A + I I + + F D I + + Y++ Sbjct: 148 VQKIASPTVTVAGNVVKSIPAALVYTIVTIFSSYLFIVDRDKIMEVIRPYIPAGGTKYFR 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + + +++ FL I VL + + + GV + L +I +I+ +P G Sbjct: 208 YLKKDAKRLVGGYFLAQFKIMFIIAAVLAAGFLVLGVNYALLLAIIISILDFLPILGTGT 267 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ L+ G L + + L ++ + ++P +VG + L L T L G Sbjct: 268 ILIPWAVIRLVAGEYAFGFGLLVIYVLTL-VLRQVIQPKIVGDTMGLDPLMTLLFLYLGF 326 Query: 321 RTMGLLGLFIGPVLMALIAVIWK 343 + G+ G+ + + L+ +++ Sbjct: 327 KISGIAGMILAVPVGMLLINLYE 349 >gi|134094948|ref|YP_001100023.1| hypothetical protein HEAR1742 [Herminiimonas arsenicoxydans] gi|133738851|emb|CAL61898.1| putative permease [Herminiimonas arsenicoxydans] Length = 387 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 115/331 (34%), Gaps = 20/331 (6%) Query: 16 IMFIILVSLYFL------KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I IL S+ F+ FF P++ + I +T P+ + ++ T+ Sbjct: 36 ISLTILASVAFVFALSAAHKFFIPLVFGIFIAYTLNPLVVWLERIRIPR-----MVGTLF 90 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-----DIPGGMWASELWT 124 V+ + L+ E ++ + A Q + L I A+ Sbjct: 91 VIAAILSSALWTANNLRDEFNSILVSLPTATQKLTRSLKHLQKDQTSTIQQMQAAATEIE 150 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K + ++ L + + + ++ M + ++ +I +FFF G Sbjct: 151 KATNQAAGVRPLVKNTAAEQSVFNLSQWLWAGSMGAAAFASQVLMVIFLVFFFLVSGDMF 210 Query: 185 SQQLDSLGEHLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L + + I + I+ L + + I GL++ A G+ + Sbjct: 211 KRKLVKISGRSLSSRKITVNILDAINTSIQHYMLMLLVTNILFGLLMWIALRWVGLENAG 270 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG--AIELFIVDKTLRPFL 300 A V + +IP P+ A + ++ L + G I +V + ++ Sbjct: 271 AWAVAAGFLHIIPYFGPLLIVAATGVTAFMQFETFSSVLTVAGLTLIIATLVGTFVTTWM 330 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G K+ + F L+ G+ G+ +G Sbjct: 331 TGRIAKMNTVAVFVSLLFWTWLWGVWGMLLG 361 >gi|90416228|ref|ZP_01224160.1| putative membrane protein [marine gamma proteobacterium HTCC2207] gi|90331953|gb|EAS47167.1| putative membrane protein [marine gamma proteobacterium HTCC2207] Length = 360 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 113/325 (34%), Gaps = 30/325 (9%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A+ I P+ S ++ + +A++ V ++ L + L + + + Sbjct: 32 LVPFLLAVFIAMIVSPLLSWLKNR--SIPSAIAILMIVVLIMLVGLMLTAVIGSSVENFR 89 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + +P + + ++ W + +F + + F Sbjct: 90 Q-------------DIPLYSEKLSAMSVGAQSWLSLRGVDIDPQQWQNSFDPSVVMSFAG 136 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + FG + + + ++ +I L + L ++ + Sbjct: 137 STLASFGSVMTNAVMILLTVIFIL-------TENVGFGEKLRMARGKDVSEEWLNRFSES 189 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + S T I++ GL++ + GV V ++ ++ +P G+ I+ + Sbjct: 190 VHSYLAIKTGISLVTGLLIFIWLSILGVDYPVLWALLAFLLNFVPTVGSFIAAVPAVLLA 249 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ +F+A + ++ + P +G + L L F LV L G Sbjct: 250 TVQLGVFSAGLTLAGFVVVNLVMGNAVEPRWMGKGLNLSPLVVFVSLV-------LWGWV 302 Query: 330 IGPVLMALIAVIWKESIMAIKENKE 354 +GPV M L + +A++ +E Sbjct: 303 LGPVGMLLSIPLTIMIKIALENQEE 327 >gi|125974914|ref|YP_001038824.1| hypothetical protein Cthe_2429 [Clostridium thermocellum ATCC 27405] gi|256003829|ref|ZP_05428816.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|281418620|ref|ZP_06249639.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] gi|125715139|gb|ABN53631.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] gi|255992167|gb|EEU02262.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|281407704|gb|EFB37963.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] gi|316939125|gb|ADU73159.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 1313] Length = 356 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 127/362 (35%), Gaps = 28/362 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTF 61 + I+ ++ F +L ++Y + +F P L A+II + P+ S +K + Sbjct: 8 KQKKAIISLILAFTLLFAIYIIMNYFLALILPFLIAVIISSVNEPVISYMETKLRLNRKI 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +VI+ + + + I+ + + E+ +L S + + AS Sbjct: 68 ASVISIIMTVSIIIILISLCIFKVYYELVKLNSNLPYYMES------------FSATASA 115 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL----------DYCLSIIFMI 171 + + L L+ N +P+ + G I + + Sbjct: 116 CYDRMSVFYYHLPKGLADILENNFKSLLPKLETITGKIAESIISSIASIPKAAVFTAVTL 175 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++ +F D I + + I I I+ + Sbjct: 176 LSSYFISSDRKKIRNFIYRQLPVNLKQGFIGIKSDAISTIAGYIKAQLILMSITFIETTL 235 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + V +G I AI +P G I + + +I GNI A + + + Sbjct: 236 GLIVIKCEYAVLIGFIAAIADALPIVGTGIVLFPLIGWNIITGNIQIALGITAVYLLGV- 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I+ + + P +V + T + G+ G GLFIGP+ + ++ + K ++++ Sbjct: 295 ILRQIIEPKIVSSQTGIHPFATLVSMYLGMTLFGFPGLFIGPIFVTILKSLHKSGLISVW 354 Query: 351 EN 352 ++ Sbjct: 355 DD 356 >gi|254422704|ref|ZP_05036422.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190193|gb|EDX85157.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 353 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 124/343 (36%), Gaps = 21/343 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVL----SALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++R++++F+ + L +F V+ +A I+ F I Sbjct: 14 SLLRYLLLFVCGWAAVALLEYFETVIIIFTAATILAFLLSYPVRWLRRFLPH--GVAVSI 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + + + L+ + +L+ + + A E + + Sbjct: 72 VFAIALMVIGGLITTIALVVLSQGQPLIDNLS----------DFLTSLTPRIEALEQFLQ 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P L+ L F + ++ L + + + F DG + Sbjct: 122 RRNLPVDLQSLGAQFRDQAVG--LLGVGVNLLQGLVNNFLHSVLIAVVTLFMLFDGARLW 179 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + L ++I+ V F G +++I G+ + L GVP L Sbjct: 180 YFL---IKRLPLDQQRRITETVQDSFLGFFWGRLLLSIFFGVSTFVVFLLLGVPYAPTLA 236 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + +IPG ++ L+ +I AT + + + + L P ++ + Sbjct: 237 VIAGVFDLIPGIGATLGVSLISLFLLSQSILLATQSIVICVVLQQVEENLLLPRIMKDSL 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + FF L+ G R G+LG+F+ + + I + + M Sbjct: 297 NINPVVMFFALIVGARIAGVLGIFLSIPVASTIINLLEIDEMK 339 >gi|269928762|ref|YP_003321083.1| hypothetical protein Sthe_2852 [Sphaerobacter thermophilus DSM 20745] gi|269788119|gb|ACZ40261.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 378 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 65/201 (32%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + + D + +I + D + L + Sbjct: 168 TQVAESLLANILGAASSVFDLGVKTFGIIFVAIYLVIDSRRVKAAYLRLTPSHYRRDAMV 227 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + G+TI + +G + G A W+ GVP + LG ++ A+IP Sbjct: 228 LWDEFGSSLSRYLGGLTISLLVQGALSGIALWILGVPYPLLLGAWVSLTAIIPYLGAFLG 287 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + L P + G +++ + ++ Sbjct: 288 AIPAVLLGFYQSPTTGVLVIVLYIAIQQVESNLLTPRIQGQAVRVHPIIVLLSVIAASEI 347 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 GL G ++A++ V+ Sbjct: 348 DGLRGAIFAVPILAVLRVLLD 368 >gi|290894088|ref|ZP_06557061.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556343|gb|EFD89884.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 345 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 115/361 (31%), Gaps = 26/361 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I + ++ +LV Sbjct: 65 VLLLYALIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKD 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNTILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP G IS ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 Query: 358 S 358 Sbjct: 344 H 344 >gi|209520430|ref|ZP_03269191.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209499122|gb|EDZ99216.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 364 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 135/350 (38%), Gaps = 18/350 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++ V +Y ++ A+ + +P+ + + +A IA V V+ + Sbjct: 15 AFLIGLLFVIIYIASTTVLVIVYAVFFSYLIYPMVALVERVRPRRVPRVASIAFVFVVVV 74 Query: 74 FIVPL--LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + + LV ++ + + + +P + L + + + Sbjct: 75 ALLAVVGSVFGVELQDQASRLVKQLPALLRTDVQ-----NRLPLPHFLEPLRERIVDFVR 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQL 188 S G D A G+ + ++I+++ I F +DG + Sbjct: 130 SQI--------ETGSDKAVPLARSVGLGVVHAASNVIYLVLIPILSFLLIKDGEQMRDAF 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L W +I V ++ + +++ L G A+ L GVP L V Sbjct: 182 LALLNRPHRTLWSEIVVDVNVLLSKYVRALLFLSLATLLCYGVAFSLLGVPYAFLLAVSA 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++ +P P++ A+++ + + + L ++ + D L P+L+ +++ Sbjct: 242 ALLEFVPFAGPLAAIAITLVVAVFSGYPHLLWLLIFIGLYRLFQDYVLNPYLMSEGVEVS 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL+ G + G+ G+F+ ++A + ++ + M E E ++ Sbjct: 302 PFLVIVGLLAGDQLGGVAGIFLAVPVIATLKIVVGRARMFYAELHEHDAA 351 >gi|23100493|ref|NP_693960.1| hypothetical protein OB3038 [Oceanobacillus iheyensis HTE831] gi|22778726|dbj|BAC14994.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 364 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 119/324 (36%), Gaps = 7/324 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI L + P++ A I+ + + P+ + + +K +I + ++ + + Sbjct: 28 FIFTPLLQLIGAVALPIIGAGILYYLTKPVMNFLVKRKVP-KILSIIIVFLLIISVIALF 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +LF++ + L+ V + + S + + +S Sbjct: 87 VLFIWPIARDQANRLIESVPGMIKMVEDFISY-----WQQNYSSIPDQVISAINDFAQDI 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 +L+ + + G + L +I + LFF +DG + + L + Sbjct: 142 PAYLENATSNIFGFLGAFIGQ-LVSIVLGVILIPFFLFFMLKDGNKLVPFITQLFDEKKA 200 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + KV+ S G ++++ G++L Y + G+ V L + +M +IP Sbjct: 201 KNLQNLLSKIDKVLTSFIQGQLLVSLAVGILLLIGYLIIGLQYSVILALFGMLMNVIPFL 260 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + N + + + I + P ++G + L L ++ Sbjct: 261 GPYIAVIPALLVGAFQDPMNIFWVAIIMLVAQQIESTLISPNVMGQVLNLHPLTVITVIL 320 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G +G+ + A+I I Sbjct: 321 AAGSIAGFIGILFAVPIYAIIRTI 344 >gi|148254854|ref|YP_001239439.1| hypothetical protein BBta_3439 [Bradyrhizobium sp. BTAi1] gi|146407027|gb|ABQ35533.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 370 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 86/246 (34%) Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D+P + + ++ + + R+ + F + + Sbjct: 120 KDLPQSLTQVVQEFVETPWGVWVVGRAQDVNIGSATGPLARYIAAFFGSVFHTSAYVAVL 179 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + A +F L + +++ ++ +R +G +I G + Sbjct: 180 LFASGYFAVQPARYVDGLLRMVPADRRPRAEEVIELLGSTLRRWLIGQSITMAVVGTLTA 239 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 L GV + +ALG+I+AI A +P P+ + + I + A + A F Sbjct: 240 IGLLLLGVAAPIALGLISAIFAFVPYVGPVLASLLGILMAAMQGPTIALYVIALYAAIHF 299 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + P + ++LP + T F + +G +G+ + L ++ + + Sbjct: 300 VEGNLVTPLVQAEAVELPPVLTLFATLIFGLLLGPIGVLLAAPLAVVVLLAVNTLYIEGM 359 Query: 351 ENKEKI 356 + ++ Sbjct: 360 LGETRV 365 >gi|16800526|ref|NP_470794.1| hypothetical protein lin1458 [Listeria innocua Clip11262] gi|16413931|emb|CAC96689.1| lin1458 [Listeria innocua Clip11262] Length = 345 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 121/358 (33%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R + +I LY L+ +L I + + + + + + ++ Sbjct: 8 LQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + + ++ +LV + +E Sbjct: 68 LYVLIAGVIVFVFVKYIPVLADQINQLVKFGNSFLKT--------------DSNNEFINY 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S I+ G+ I + + G + ++ + ++ FF + Sbjct: 114 IVSLANQFDIMK---YTEQGVSMILTYLTNVGTVLMN----VFIALMLSLFFSLGKDHLI 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ + + + K+ IS Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEVNQPKDTISH 344 >gi|295091387|emb|CBK77494.1| Predicted permease [Clostridium cf. saccharolyticum K10] gi|295116280|emb|CBL37127.1| Predicted permease [butyrate-producing bacterium SM4/1] Length = 418 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 118/349 (33%), Gaps = 23/349 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSF-----------ISKKEESSTFLAVIATVSVMCLFI 75 L+G AP++ I+ + P+Y+ + ++ + + T + + + Sbjct: 43 LRGIAAPIIYGSILAYLLAPVYNRVTGAGLRVLSGRLKSRKHAEVIARAVGTAASLAVIF 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPG------GMWASELWTKHLS 128 V + L + ++ + + A + + W+ + + + T Sbjct: 103 VVIAGLLQLIIPQVVDSIMGFQAAFPTYLQNLYSWIQKLLADNSEIEQIVIGNIQTAVSL 162 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ F ++F+ +S + ++ + + +I + + + Q Sbjct: 163 FDGWLEQAFTRFDMNRLVEFLTGVSSSL-FLLFNFVKNWLIGLIVMVYMLNIKDRLITQA 221 Query: 189 DSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + R+V ++ +G + ++ G++ + P + + Sbjct: 222 KKIVYGCLSIRLANHVISEMRLVHRMFGGFIIGKILDSLIIGILCFIGTSILHTPYALLV 281 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +IP P S L++ + L LW I I + P ++G Sbjct: 282 SVIVGVTNVIPFFGPFIGAIPSGILVLLVSPVQCAVLLLWILILQQIDGNIIGPKILGNS 341 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F ++ G +G+ I A+I + K+++ K Sbjct: 342 TGLASFWVLFSILIFGGLFGFVGMIIAVPGFAVIYDLVKKAVNYSLRRK 390 >gi|77163728|ref|YP_342253.1| hypothetical protein Noc_0190 [Nitrosococcus oceani ATCC 19707] gi|254435334|ref|ZP_05048841.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76882042|gb|ABA56723.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207088445|gb|EDZ65717.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 356 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 114/356 (32%), Gaps = 20/356 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ + +++ + +++ + APVL++L+I + I + Sbjct: 14 DPQVVGLAILLAVGFITVVLMGRMLAPVLASLVIAYLLEGIIGYMERWHCPR-WLAVTLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ M + L ++ E + + + + +P + ++ G +L Sbjct: 73 FITFMAALFSLIFGLLPLLSQQLTEFFQQLPVMIARGQELLLSLPEYYPNLFSGEQVYDL 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S + + + + + ++ M + +FFF +D Sbjct: 133 MSALRSELAQW------------GQKVLSVSLASVVGLITLAVYLVIMPLLVFFFLKDKA 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L+ ++ V I + G + + V + G+ + Sbjct: 181 RLIGWLEQYLPR-ERKLAAQVWHDVDFQIGNYVRGKFLEILIVCAVTAITFTFMGLQFSM 239 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + +IP GA + V+ + G + L I + L P L Sbjct: 240 LLSVLVGLSVIIPYIGAVAATLPVAFVAYFQWGFSIDFAYLLGAYGIIQALDGNVLVPLL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L L+ + K + I Sbjct: 300 FAEVVDLHPVAIIVAILVFGGFWGFWGIFFAIPLATLVQAVLKAWPSLPPPEESTI 355 >gi|228993129|ref|ZP_04153051.1| hypothetical protein bpmyx0001_38650 [Bacillus pseudomycoides DSM 12442] gi|228766588|gb|EEM15229.1| hypothetical protein bpmyx0001_38650 [Bacillus pseudomycoides DSM 12442] Length = 315 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 112/311 (36%), Gaps = 11/311 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ + T++++ ++I+ L Y Sbjct: 6 ITPFLIACFIAYLLHPLIEKLYKEGMPR--------TLAILLIYILFFGGLGYGIYKGTP 57 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +++++ N+ P+++ M T + K+ I + Sbjct: 58 VVIAQLQEINK---QFPQFMKMYDSWMDGVTEQTDNFPSFIHEKVKQIFVGIEMKIQALL 114 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 115 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHVFWKLVPSKWRSTGQVLAKEIDKS 174 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W + + LG+I + +IP PI ++ + Sbjct: 175 LGSYIRGQLFVCLVLGGVSALSFWFIAMKYPLLLGIIVGVTDIIPYFGPILGAIPTLMIA 234 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 235 ATVSTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEIGGIVGLLI 294 Query: 331 GPVLMALIAVI 341 ++A+I + Sbjct: 295 AVPILAVIRTV 305 >gi|167768349|ref|ZP_02440402.1| hypothetical protein CLOSS21_02905 [Clostridium sp. SS2/1] gi|167709873|gb|EDS20452.1| hypothetical protein CLOSS21_02905 [Clostridium sp. SS2/1] gi|291560321|emb|CBL39121.1| Predicted permease [butyrate-producing bacterium SSC/2] Length = 391 Score = 75.6 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 106/330 (32%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMCLFIV 76 L P +I + P+ + F +I+ + ++ IV Sbjct: 47 LWEILFPFFMGFLIAYILNPVVAFFQRNVSMKLLKKKSANAQRGLAILISYLVMVGFIIV 106 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L F+ ++EL + + + + + M+ ++ + Sbjct: 107 CLRFIIPQLYDSIRELSLMIPDIYKSIMSIFEHYRENSTDMFPGQIADMIETKTLPKLFE 166 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L TN + + + F + ++ I I + + + + ++ F Sbjct: 167 LTNNLLTNIVPMLYEASMSFAKGLFNLFIAFIVSIYMTIDKFILKNAGKRLVLAIFNENF 226 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + +G +I ++ GL+ A + +P V + VI + MIP Sbjct: 227 SYRVLRTLKDCHNIFSGFIIGKSIDSLIIGLLAFVAMTILKLPYTVLISVIIGVTNMIPY 286 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 PI ++L + + + L P ++G + L F + Sbjct: 287 FGPIIGAVPGAFILFIVSPTKCLIFIIMVFVLQQFDGLILGPKILGESTGVRPLLILFSI 346 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G G LG+F+G A + + + Sbjct: 347 TVGGAYFGPLGMFLGVPFFATVQFLIGNWV 376 >gi|297624176|ref|YP_003705610.1| hypothetical protein Trad_1953 [Truepera radiovictrix DSM 17093] gi|297165356|gb|ADI15067.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 373 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 93/302 (30%), Gaps = 12/302 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + L+ L F L+ G S F + + + +F Sbjct: 35 LTVLGALLLWRLADIFLLAFIGLLFGVFLDAASSLFRRYLSLPRGWSLALTLLLFAGVFA 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + L + Q+ + L P L L Sbjct: 95 LALSLLGPTLAAQAVALFEGLPRFLQN---LEAELGGTPWYDSLRALLPAPDEGADRLGQ 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L I + + + + I ++ + L SL Sbjct: 152 MLSQVL-AQTTQLITSLTTLVFYGVFIFFVGLFLAIHPRYY--------QEGLVSLWPPP 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++++ + +R+ +G I + G V G W+ GVP LGVI A+ IP Sbjct: 203 QRRRAREVTSKLGYTLRAWLVGQLISMLLIGTVTGVGLWVLGVPLAFVLGVIAALFEFIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ L + A + L+ + + + P + + LP + G Sbjct: 263 NIGPVLAAVPAVLLAFAQSPLLALYVALFYLVIQQLEGNVIHPLIQRRAVDLPPVLGIIG 322 Query: 316 LV 317 + Sbjct: 323 VF 324 >gi|110634895|ref|YP_675103.1| hypothetical protein Meso_2554 [Mesorhizobium sp. BNC1] gi|110285879|gb|ABG63938.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 356 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 4/262 (1%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 ++L +Q + + +P + A E L E ++ + + Sbjct: 93 ILLGSQLQAQFGQLIERVPDLLRALE---DRFGIDNLEGRLVEQIQQSMARTSLLSNVAG 149 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 F +++ +++A + D S + L + ++ +R Sbjct: 150 FSSAIFGSLANLLLVMVAGIYLAADPRSYRRGFFLLFPRRARREAAETLDVLYMALRLWL 209 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 LG + G WL GVPS +ALGVI ++ +P PI A ++ + + + Sbjct: 210 LGQLLSMFLVGAASAVGLWLLGVPSALALGVIAGLLEFVPVIGPILGAAPAVAVGLAESP 269 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVL 334 A + L + + + P + ++LP T F ++G G LG+ P+L Sbjct: 270 VTAAWVALLYLVIQQLEGNLIMPLIQQRMVRLPPALTIFAIIGFGLLFGPLGILFATPLL 329 Query: 335 MALIAVIWKESIMAIKENKEKI 356 + + + K + + ++ Sbjct: 330 VVVFVSVKKLWVRDTLDEDTEL 351 >gi|260886083|ref|ZP_05736457.2| putative membrane protein [Prevotella tannerae ATCC 51259] gi|260850602|gb|EEX70471.1| putative membrane protein [Prevotella tannerae ATCC 51259] Length = 378 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 127/361 (35%), Gaps = 22/361 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFA--------PVLSALIIGFTSWPIYSSFISKKE 56 M+ + I ++V L G+ P A + + +PI K + Sbjct: 1 MMKKEITFDRFIRGALVVGGLILAGYIISYLSTVLLPFFVACAVAYLLFPIVRFLQYKCK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + L++ ++++ + L ++ L+ + +V + + + Sbjct: 61 LKNRILSIFVALALLLGTLTALAYIIVPPFLDEFSHIKEVAINFLKDPKMQEKV----IP 116 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR---FASRFGMIFLDYCLSIIFMIIA 173 + +S + ++LS ++ +P+ + L+ S+I ++ Sbjct: 117 PHVLHFIQERISAARIEQLLSSKDVQEAAQKILPKAWDVIWSTAGVILNILASLIGLLY- 175 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +D + + H +++ + + + F G ++A+ ++ + Sbjct: 176 LFFLLKDYERYAYGWINFVPHSRREIARQLVGDIKQGMDGYFRGQALVALSNCIMFSVGF 235 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAI 287 W+ P V LG +++ +P + F L+ G F + L + Sbjct: 236 WIIDFPIPVGLGCFIGLISFVPYLQVVGFIPALFLALLRAADTGQSFWLLFGGVCLVYIV 295 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + D + P ++G + L L +G++GL I + L+ ++ ++ Sbjct: 296 VQVLQDTIVTPHVMGKIMGLSPAVILLSLSVWGYILGIVGLIIALPVTTLMISYYRRYVI 355 Query: 348 A 348 Sbjct: 356 G 356 >gi|297583588|ref|YP_003699368.1| hypothetical protein Bsel_1290 [Bacillus selenitireducens MLS10] gi|297142045|gb|ADH98802.1| protein of unknown function UPF0118 [Bacillus selenitireducens MLS10] Length = 362 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+L A ++ + PI + K F + + + L + + + Sbjct: 40 FFPLLFAGVLYYLFRPIVNLLSRKFP--RGFSIALLYIGFLGLGAGAISLIGPELQKQFY 97 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ V V + + + + T + Sbjct: 98 NLMDSVPGIMNDLQYV---FMQLQETDLIEGSGLEEWLDVEDRLEEIGAMISTIAGGLVS 154 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + G + L + LFF +DG ++ + + + + Sbjct: 155 NTMAFLGT-LFNTLLLFFIVPFILFFLLKDGDRLAPYALKFFSEEKQEEIRPVLQNMDFT 213 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G+ I+ G++ + + + GV + L +I +IP P ++ + Sbjct: 214 ISRYIQGILIVCTFIGVLYYTGFTIIGVEYSLILAIIGMFTNVIPYVGPWLGAVPAVIVA 273 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + I + ++P ++G +++ + ++ + G+LG+ + Sbjct: 274 LIHSPLQAFLVIVLVVIIQQVESILIQPNVIGRVMRIHPVTVLLLVLVAGQFAGILGMIL 333 Query: 331 GPVLMALIAVI 341 + A+ V+ Sbjct: 334 VIPVYAVTKVV 344 >gi|304411431|ref|ZP_07393045.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307305247|ref|ZP_07584995.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304350286|gb|EFM14690.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306911550|gb|EFN41975.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 360 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 107/317 (33%), Gaps = 12/317 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + V + + ++ L + L++ + G+ Sbjct: 54 WPVAQML--KLGINRTAGASLVIVLFLGIVVLLTFGLIPSVWRQGVSLIADLPSMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L + + + + L T + I + + L Sbjct: 112 LTIQTLIN-------QYPQFINPEQLDLMVGELKKLLDTQHVLDIAKQLIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLISGSKRFFP-ANRQLARKVWFEMHQQIFNYIRGKVIEIVV 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + + G+ V LGV+T + +IP GA + +++ + + + Sbjct: 224 VGVATYILFAVMGLRYSVLLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNLLVPILFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KESIMAIKENKEKISSN 359 E+ + ++ Sbjct: 344 NAWPKTEVESLHGLDAS 360 >gi|291526224|emb|CBK91811.1| Predicted permease [Eubacterium rectale DSM 17629] gi|291526734|emb|CBK92320.1| Predicted permease [Eubacterium rectale M104/1] Length = 437 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 109/332 (32%), Gaps = 27/332 (8%) Query: 14 WMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKK-------- 55 + + + +LY +GF P++ L++ + P+ Sbjct: 46 FAVSILFFFALYRFEGFAGIWSKLLAAAMPIIMGLVLAYLMNPVMLWLERCFKKLLSKKM 105 Query: 56 ----EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + A+ T SV+ L + L + + + + + Sbjct: 106 KSESKLRKVSRALAITGSVIILVAIISLLIAAIVPSVIASISGLMKTLPNDVAAFINMIK 165 Query: 112 DIPGGM-WASELWTKHLSHP-QSLKILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLS 166 + G +EL + L + ++ + L ++ + + ++ + Sbjct: 166 NGNFGDSKIAELASTGLQNATDYIEDYATEKLIPEAQKYVAQITTGVISVVRGLFNFIIG 225 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 II M+ + + + ++ + + R ++ G I ++ G Sbjct: 226 IIVMVYVMSIQETLAGQSKKIIYAVCKPKTGNIIIETIRKTNEIFGGFISGKIIDSLIIG 285 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ + +PS V + VI + +IP P S+ +++ + ++A L ++ Sbjct: 286 VIAYFGCLILRIPSSVLVAVIIGVTNVIPVFGPFIGAIPSLLIVVIQSPWHALYLLIFIV 345 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + P ++G L F ++ Sbjct: 346 VLQQVDGNIIGPKILGSSTGLSTFWVMFAILI 377 >gi|293376194|ref|ZP_06622439.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325838909|ref|ZP_08166715.1| putative membrane protein [Turicibacter sp. HGF1] gi|292645181|gb|EFF63246.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325490650|gb|EGC92961.1| putative membrane protein [Turicibacter sp. HGF1] Length = 370 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 117/341 (34%), Gaps = 23/341 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKG--------------FFAPVLSALIIGFTSWPIY 48 E LN + I R +++ ILV + +K +P + A+ + + P+ Sbjct: 5 EETLNFKLINRVVLLIGILVGVQVIKICFPIIKPVISALNLIISPFIIAISLAYLLNPLV 64 Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 F + S +++ F+ + LFY + L+ + + Sbjct: 65 DFFCRLHFKRSY--------AILVTFVSIVGGLFYAIFSLIPYLIVNIQEVLNSMPMLIE 116 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + + + + S+ F + + ++ Sbjct: 117 KVELLISNLNLDYIDIYKFDFSSLFSENSKFFTLFSSFLSRAGSWLSSASSSFTMIIGML 176 Query: 169 FMI-IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 F++ I L++ + + + ++ + + I + +V+R G +++ + Sbjct: 177 FLVPILLYYILNNFYELRNRIKNYLITHRHIQFFNILKESEEVVRGYVSGTLAVSLALSI 236 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + L G+ + V GV+ + +IP I T + + +I+ + + Sbjct: 237 IASIYFALIGLDNAVVFGVLIGFLNIIPYVGQIIGTIPAALFGLTVSIWTPVYVIIGVLA 296 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 FI ++P + + + ++ G + G++G+ Sbjct: 297 LNFIEGNFIKPLVFSKAVDFHPIILLTLIIIGGQIFGVIGM 337 >gi|209559400|ref|YP_002285872.1| hypothetical protein Spy49_0869 [Streptococcus pyogenes NZ131] gi|209540601|gb|ACI61177.1| hypothetical protein Spy49_0869 [Streptococcus pyogenes NZ131] Length = 369 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 110/291 (37%), Gaps = 8/291 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + ++ +S + + I ++++ + Sbjct: 80 ICLLLAYLTFFILITWIISIVIPDLITSISTLTKFDTITIQ--EVVNNLEHNKLLARTIQ 137 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 ++ L + + F+ + + + +++ + + Sbjct: 138 -YIGGDGKLTETIANYSQQLLKQFLTVLTNILTSVTVIASAIINLFISFVFSLYVLASKE 196 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q ++L + Y K+I ++ + F+ T+ A+ G + S ++ +P Sbjct: 197 DLCRQGNTLVDTYTGKYAKRIHYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLP 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 257 FAGTIGVLVAFTALIPVIGASIGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPK 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +VGG I LP + + G G++G+ I L A + + K++I + Sbjct: 317 VVGGSIGLPAMWVLMAITIGASLKGIVGMIIAVPLAATLYQVIKDNIQKRQ 367 >gi|159899319|ref|YP_001545566.1| hypothetical protein Haur_2800 [Herpetosiphon aurantiacus ATCC 23779] gi|159892358|gb|ABX05438.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 425 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 127/355 (35%), Gaps = 8/355 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALI---IGFTSWPIYSSFISKKEESSTFLA 63 + + +++ I+ + + F++ + A I + P+ + + + S Sbjct: 13 TRRVMTATLVVLAIIGLAFVIVNFYSVFVVAFIAFVLSTAIRPLVQ-LLQRLKISPQLGV 71 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +IA + ++ L + ++ + ++ + +K+ ++L + Sbjct: 72 IIAYLLLLALLVGIVVLMAPLITEQITAITAKIPEYYHDAR---QFLISSRSSFIRNLAL 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L P SL ++ + D +I ++ F++ DG Sbjct: 129 RLPLDAPISLSGVAPSETSQQQTDVAVSQLVTVVENAGISLFVLIATLLLGFYWTLDGDR 188 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L L W+ + + + + G I+ + G + +AY L G+ + Sbjct: 189 VLRTLLQLVAAEKRENWRSLIAEIQAKMGAFIRGQLILDLSIGALSTAAYLLIGIDYAIV 248 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++ ++ IP G + + L +G+ + + + I L P ++ Sbjct: 249 LGILAGLLETIPILGPVLGAVPPLLITLAQGDTTAFIWVIVATVVIQQIEGTFLVPKVMD 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + + T T+GL G + L A++ +I+ + E ++ Sbjct: 309 RAVGVNAVLTLVAFAAFSATLGLAGGILAVPLAAIVQIIFTRLVFNQAETSTNVT 363 >gi|111022136|ref|YP_705108.1| hypothetical protein RHA1_ro05169 [Rhodococcus jostii RHA1] gi|110821666|gb|ABG96950.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 421 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 105/307 (34%), Gaps = 14/307 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ +K S V+ + + + + F+ + + L + + Sbjct: 74 PLVDWLQAKGVPRSA-AVVVVLIGSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVT---Q 129 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + WL+D P ++ S +S++ + A+ G IF L Sbjct: 130 IQGWLTDGPLHFSEDQIRQAGDSVVKSIQDNRQQLTSGA-----LTTATVVGEIFTGALL 184 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + L FF G I + + L + + +A + Sbjct: 185 T----LFTLIFFLYGGSQIWEFVTRLVPTTSRRRVRLAGSQGFGSLIGYVRATVAVAAAD 240 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + +G+ + GVP + L + I A IP GA ++ + L+ A + Sbjct: 241 AVGIGAGLAILGVPLALPLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGI 300 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L+P L+G ++L L + G+ G++G + ++AL+ + Sbjct: 301 IIGVMQLEAHVLQPLLLGRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRS 360 Query: 345 SIMAIKE 351 + + Sbjct: 361 LLSTDPD 367 >gi|255068161|ref|ZP_05320016.1| acetyltransferase, GNAT family [Neisseria sicca ATCC 29256] gi|255047588|gb|EET43052.1| acetyltransferase, GNAT family [Neisseria sicca ATCC 29256] Length = 356 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 136/342 (39%), Gaps = 10/342 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ + LY L P + A ++ + P+ KK +++ V Sbjct: 13 IIMGCVIAAFVWLLYALGDILTPFIVAAVLAYVLNPLVEWL-QKKRIKRGPASMMVMVFA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + +L + + + +VS++ + + + WL+ + A + Sbjct: 72 LLLLLSLMLIIVPMLINQFNNMVSRIPQIVDFTQNRLLPWLNHV-----AGNYVHIDQAS 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L ++P + G + ++I + + L++F D S + Sbjct: 127 VVKWLQSHTGELSNTLKAWVPTLMRQSGNVISGMS-NLILLPLLLYYFLLDWKRWSYGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L F + +I+ + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 ALVPRRFIDTYTRITSNMDEVLGEFLRGQLMVMLIMGLVYGVGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP GA +I L++ + ++ + + I F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATIAALLQFSTWHGLVMVWIVFGIGQFLESFIVTPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + A Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVNAY 347 >gi|77464353|ref|YP_353857.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides 2.4.1] gi|77388771|gb|ABA79956.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides 2.4.1] Length = 375 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 14/326 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + I + PI A+I+ LL + + + Sbjct: 47 ILPFIVGGAIAYFLDPIADRLERAGLSRVAATALISVAM--------LLVVVLLVLSVIP 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LVS++ + R L +L + + Q+L + +T + G + Sbjct: 99 TLVSQLTALIDAAPTIFRQLHSFLL-DHFPQLSDETSTARQTLLSIGDTIKERGGE--VA 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ + ++ + + F+ D + ++DS ++++R + +V Sbjct: 156 NTLLTSAYGVINAMIFMVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRRLAREIDEV 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G + + G A G+ + +G I + IP + A++I L Sbjct: 216 LAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAIGLA 275 Query: 271 IK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + G+ + + A+ F+ + P LVGG + L L F L G +G Sbjct: 276 LFQFWGDWLSIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFGFVG 335 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 + + + A I V+ + I ++ Sbjct: 336 MLVAVPVAAAIGVLARFGIRQYTSSR 361 >gi|148544571|ref|YP_001271941.1| hypothetical protein Lreu_1354 [Lactobacillus reuteri DSM 20016] gi|184153930|ref|YP_001842271.1| transport protein [Lactobacillus reuteri JCM 1112] gi|227363690|ref|ZP_03847801.1| possible permease [Lactobacillus reuteri MM2-3] gi|325682899|ref|ZP_08162415.1| permease [Lactobacillus reuteri MM4-1A] gi|148531605|gb|ABQ83604.1| protein of unknown function UPF0118 [Lactobacillus reuteri DSM 20016] gi|183225274|dbj|BAG25791.1| transport protein [Lactobacillus reuteri JCM 1112] gi|227071273|gb|EEI09585.1| possible permease [Lactobacillus reuteri MM2-3] gi|324977249|gb|EGC14200.1| permease [Lactobacillus reuteri MM4-1A] Length = 375 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 122/358 (34%), Gaps = 28/358 (7%) Query: 6 LNPQGIMRWM---IMFIILVSL--------YFLKGF-------FAPVLSALIIGFTSWPI 47 ++ Q W+ ++ + + +L + + F F P++ + + + P+ Sbjct: 1 MSKQKFYHWLFWPLLLLTVATLIWVCTKIQFIFQPFLTFISVVFVPLIISGFLYYMLNPV 60 Query: 48 YSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 F+ K + S +++ ++++ + I + L + E+ LV + Sbjct: 61 LKLFLKLRIGKFKMSRGIASLLIVIALILIIIGGISLLIPTIVKEISSLVRNMPQTVSGI 120 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + I + S L L+ + + + + Sbjct: 121 QTL------INDTVQHSFLRNVDLNTYYRQFDHQIAGYAQTILKGLSERVGDIVGVVTNI 174 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I + + LF+ +DG + + ++ + + S G I + Sbjct: 175 TVVTITVPVMLFYMLKDGSKLGPSIQKWLSPHHAKEVNELLTKMNNTLSSYISGQMIECL 234 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ Y + G P + LG++ + +IP P A ++++ + + + Sbjct: 235 FVGITTSIGYMIIGQPLALVLGIVAGLTNIIPYIGPYIGIAPALFVALTMAPEKLIWVIV 294 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + P ++G +++ L L+ G+ G+ + A+I + Sbjct: 295 VVIVVQQIDGNIIYPNIIGKTLQIHPLTIIMLLLAAGHIAGVGGMILCIPFYAVIKTV 352 >gi|302536611|ref|ZP_07288953.1| integral membrane protein [Streptomyces sp. C] gi|302445506|gb|EFL17322.1| integral membrane protein [Streptomyces sp. C] Length = 448 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 91/277 (32%), Gaps = 13/277 (4%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + + + + + F+ + M + +L +++ + W Sbjct: 128 LRRLGLPRGLATAVTAILGFVVIGLVGWFVVWQVMENLDDLSNRLREGINE---LKSWAL 184 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 D P + ++ + +++ +E I + + ++ ++ + Sbjct: 185 DSPFHVTEKQINDIAKNLSETIGTNTEE---------ITSAGLQGVTVLVEVLTGMLLAM 235 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + F DG I + L + + + G ++A+ + + +G Sbjct: 236 FSTLFLLYDGKRIWTWVLGLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAVFIGL 295 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + V V L V + A IP GA IS + L+ A + Sbjct: 296 GLYFLDVTMAVPLAVFIFLFAFIPLVGAVISGALAVVVALVTQGPVIALAVLGVVLAVQQ 355 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 I L+PF++G +++ L + G G+ G Sbjct: 356 IEGHVLQPFILGRAVRVHPLAVVLAVAAGGMVAGIGG 392 >gi|83593499|ref|YP_427251.1| hypothetical protein Rru_A2164 [Rhodospirillum rubrum ATCC 11170] gi|83576413|gb|ABC22964.1| Protein of unknown function UPF0118 [Rhodospirillum rubrum ATCC 11170] Length = 369 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 110/312 (35%), Gaps = 9/312 (2%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + I W+I + + V ++ L+ P ++ L + + P+ K S + Sbjct: 1 MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLE-KWGTSRLWAV 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T+ + + ++ LL L ++ + V+ + + + R L D + + Sbjct: 60 IWITLGFVLVMVLALLVLLPLINGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRM 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S ++ + +L I G ++ ++ + F+ RD Sbjct: 120 SDVTSSLEAAAGEATKWLGGLVNQLISG-----GAALINLVSVLVITPVIAFYMLRDWDV 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +D + + + + I G + + G + G+ + Sbjct: 175 MVASIDRWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLI 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLV 301 +G+I+ +++ IP I+ VS+ L + + G + I L P LV Sbjct: 235 VGMISGLLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLV 294 Query: 302 GGPIKLPFLPTF 313 G I L + Sbjct: 295 GDRIGLHPVWVI 306 >gi|86133981|ref|ZP_01052563.1| protein of unknown function DUF20 [Polaribacter sp. MED152] gi|85820844|gb|EAQ41991.1| protein of unknown function DUF20 [Polaribacter sp. MED152] Length = 360 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 20/326 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ PI F+ KK + LAV+ T+ +M + ++ LF ++E + + Sbjct: 37 IIIAAVLSLIGRPI-ILFLRKKLKFPNTLAVVTTMILMLSLLTGIVVLFIPLIIEQGKSL 95 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 S ++ +Q V + I S + ++ N IP Sbjct: 96 S-LLEVDQLQYNVQSIFNQITA---------YFSSKGIDVLKELKSIDFANQFKTIPNIF 145 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + + + + ++ FFF +D + + +L + + ++ ++ Sbjct: 146 NSILGTLGNLSVGLFSVLFICFFFMKDSRLFKKGILTLIPNNSENKFSHSLEVINNLLSR 205 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK- 272 F+G+ ++ G+ + V + + A++ +IP PI + L + Sbjct: 206 YFIGLIFQITILFIIYTIVLLFFGISNAVVIAFLCALLNLIPYVGPIIGGLLMFTLSMTS 265 Query: 273 --GNIFNATCL-----FLWGAIELFIVDKTL-RPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 GN F A L + ++D + +P + K L F ++ G G Sbjct: 266 NIGNDFQAFILPTSLKIMVFYFLAQVLDNFVSQPVIFSKTTKSHPLEIFLVIIIGGLLFG 325 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 ++G+ + VI KE + K Sbjct: 326 VIGMITAVPSYTALKVILKEFLSENK 351 >gi|304439468|ref|ZP_07399377.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372064|gb|EFM25661.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 388 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 102/286 (35%), Gaps = 8/286 (2%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +S++ I+ + L + +L++ VV ++ + + D +E + + L Sbjct: 95 ISIILTLILTFGIITLVIALIVPQLINAVVTIEKNLPAIAQKSIDFLKSYSFTEAYGEKL 154 Query: 128 SHPQSLKILSETFLKTNG-----IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + F + G I + + F I + D Sbjct: 155 DKFVNNLSWNHLFDRIKGFFDGSNSSIAKSVLGTASGIFGSIANAFFSFIFTIYILADKE 214 Query: 183 SISQQLDSLGEHLF---PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +S Q L + +F Y K + + I A G+V + G+P Sbjct: 215 HLSYQAKKLVDAIFLEKAPYVKHVLSMTKNNFYYFVKAQLIKASIMGIVTFIMMMILGLP 274 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++P PI + + ++ + A + G + + L P Sbjct: 275 YPSMIAVIAATTDLVPLIGPIIGVFLGVLFILIESPTQALIYAILGIVLQQLEGNILDPK 334 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG + +P + + F +V G G++G+++ L A + + E Sbjct: 335 LVGNSLSIPPMWSLFAVVVGGSLYGVVGMWLFVPLFATLYKVVSEW 380 >gi|302387164|ref|YP_003822986.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] gi|302197792|gb|ADL05363.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] Length = 357 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 2/218 (0%) Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ S + S L TN S + + ++ M+I+ FF D + Sbjct: 131 AALNDMFSQFVQSIGELVTNLSVQSVSALSGYASSLPGIFIKLLLMVISTFFIAGDYDML 190 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 A ++ V + +I + L + GVP+ + + Sbjct: 191 VGFASRQLSDKARALLLQVKNYVVGTLFVCIRSYALIMSITFVELAIGLSIIGVPNAILI 250 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +I ++P G ++ I+GN A L + + + ++ L P +VG Sbjct: 251 ALAISIFDILPVLGTGGIMIPWTVITAIQGNYPLAIGLLVVY-LIITVIRNILEPKIVGS 309 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L + T + G + G+ GLF P+L++L+ + Sbjct: 310 QIGLHPIVTLASMFVGAQLFGVFGLFGFPILLSLLRHL 347 >gi|87301132|ref|ZP_01083973.1| hypothetical protein WH5701_14641 [Synechococcus sp. WH 5701] gi|87284100|gb|EAQ76053.1| hypothetical protein WH5701_14641 [Synechococcus sp. WH 5701] Length = 347 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 116/326 (35%), Gaps = 30/326 (9%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + ++A ++ + + +I ++ + + + + L + + Sbjct: 37 FRAVLTVFIAAAVLAVLLDYPVRRLV-RLGCGRGLAILITVLAGLAVASLFVAVLGFQLI 95 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + L++ +VL Q +P +L+ I L Sbjct: 96 NQGSSLLNDLVLGLQRPDLPFHNYLNTIELSKVLELLRAS-------------------- 135 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G F + + ++I ++ +G + SQ L L E + + R Sbjct: 136 ---LGTGLGVIGGAFTNVFGGVFLLVIVVYMLVDNGATWSQALRLLPEDVRG----RFDR 188 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V K + G + I L + L GV + L ++ ++ IPG GA + Sbjct: 189 SVQKNVLGFLRGQITLMIFLSLASFLVFALLGVKFSLVLAIVVGVLDAIPGIGATLGVIV 248 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 S + + + A + + + I D + P ++G +++ + FF L G R G Sbjct: 249 ASGLVFLTQGQWLALQVVIASVVLQQIQDNLIHPRVMGRALEIRPVVLFFALFVGERLAG 308 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 LLG+F+ + +I KES A Sbjct: 309 LLGVFLAIPVTGMILGWGKESEEADP 334 >gi|289706835|ref|ZP_06503178.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289556520|gb|EFD49868.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 420 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 116/326 (35%), Gaps = 24/326 (7%) Query: 13 RWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 R +++ + L L + FF APV L + ++P+ + I + A Sbjct: 25 RMLVIVLTLAGLVLVVQFFQGIASIAAPVFLGLNLVIVAYPLQAWLIRR-GLHPVLGATT 83 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V+ + V + + G+ + EL Q + V WL++ Sbjct: 84 TVLLVVAVMAVFAGMMVWSGLELVAELPKYTDRFQQIVLDVSHWLNE------------- 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P + + + ++ ++ +I+ +FF D + Sbjct: 131 RGVTPDMVSQQLASIDMSTVTGTAVSAITKIATNVYAVFGLLVTVIMGMFFLAMDSMDVE 190 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + +R ++ T+ + ++ A L GVP + G Sbjct: 191 RRVRLLST--ARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLDVIALMLIGVPLALVWG 248 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V++ + +P G I ++ L G + + + ++ F++ ++P + G Sbjct: 249 VLSFLTNYVPNVGFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVLNFVLQSVIQPKVAGDA 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + +F L+ +G LG + Sbjct: 309 IGVIPTVSFLSLLFWAWVLGPLGAIL 334 >gi|83815462|ref|YP_446239.1| domain of unknown function, putative [Salinibacter ruber DSM 13855] gi|294508171|ref|YP_003572229.1| Conserved hypothetical protein containing UPF0118 [Salinibacter ruber M8] gi|83756856|gb|ABC44969.1| Domain of unknown function, putative [Salinibacter ruber DSM 13855] gi|294344499|emb|CBH25277.1| Conserved hypothetical protein containing UPF0118 [Salinibacter ruber M8] Length = 413 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 123/339 (36%), Gaps = 13/339 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + +++ G ++ ++ + P +++ F V L Sbjct: 78 VGWMVWYFAGIVLYLIVGGLLAYLLRPPVDYIQGLGVGR--------VPAILVAFAVFLG 129 Query: 80 FLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +V +Q I +++++ + + ++++ +E Sbjct: 130 VIVVIVTSVVPFITRQVQDLSQLITIDTAAYVANLIEAQVQGVVPLEQGVLEENVRQAAE 189 Query: 139 TFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + ++ + + + S +F + +++ + FF +D I + L L + + Sbjct: 190 SLMRGDLVEGQQVAETVSSVVSVFTNIVYAVVIVPFVTFFLLKDELRIRRSLLHLVPNRY 249 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 I V I F + + ++ + W+ G+ +A+G+ T + IP Sbjct: 250 FEVTLSILAKVELNIGRYFRALLVQGTAIAVIASTLLWIVGLRGAIAIGIFTGLANTIPY 309 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT-LRPFLVGGPIKLPFLPTFF 314 G + F A ++ + + + + D L+P + + L F Sbjct: 310 FGPFLGFLAGTLVGIAQTGDVSLVPGVALAMALTQLADNVLLQPLIFSRAAQTHPLVILF 369 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G + G+LG+ + L + VI ++ + +++ + Sbjct: 370 VVLAGAQLGGILGMLMAIPLTTTLRVIVEQLLWSLRNYR 408 >gi|167754764|ref|ZP_02426891.1| hypothetical protein CLORAM_00268 [Clostridium ramosum DSM 1402] gi|167705596|gb|EDS20175.1| hypothetical protein CLORAM_00268 [Clostridium ramosum DSM 1402] Length = 365 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 108/330 (32%), Gaps = 17/330 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVPLLFLFY 83 P++ ++ + P+ + ++ +++V+ + I+ L +L Sbjct: 40 PIIIGGVLAYFLEPLVQMVTKLFENCQSSFLKKHRRVLSVLLVSLAVILMIILLLTWLIP 99 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M E + V + + I L + Q+ ++ Sbjct: 100 MVMDYAVEFAKNIDT------YVKSFEASINSSFEDPNLAGTIIQVEQTFVDSIKSLSAN 153 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + ++ I FA + G L + +IF L + + + Sbjct: 154 DFMEVIA-FAGKTGSTLLTILMGLIFCPYILIEAEKLARIFDRFMLCFISQENLDLIHGY 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + ++ + G I ++ GL+ + L G+P L + I MIP G I Sbjct: 213 AIKSHRIFGNFIYGKFIDSVIIGLIALVGFGLMGLPFFPLLAFVVFITNMIPYFGPFIGG 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V +L+ I A L+ L P ++G + + + Sbjct: 273 VPVVFIVLLTNGIMPAIWTALFIFALQQFDGLILGPRILGDSVGISPFWIICSITIFGSL 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G LG+F+G L+ +I + + + + K Sbjct: 333 FGFLGMFLGVPLICVIRMFFNDFLEYRKNR 362 >gi|291454538|ref|ZP_06593928.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291357487|gb|EFE84389.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 406 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 22/356 (6%) Query: 8 PQGIMRWMIMFIILVSLYFL--KGF------FAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M+M + LV+ + L F +L A + P S ++ Sbjct: 2 PRWLPRAMVMALALVAAFQLGTWAFHQLTSLLINILIAFFLALAVEPAVSWMAAR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + L ++ ++V ++ V W++ + Sbjct: 61 GLATAAVFLGLLVASAGFVTLLGSMLAGQIVDMVEDFP---KYLDSVISWINQTFHTDLS 117 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L H L+ + L ++ +++ F+F Sbjct: 118 RLEVQDSLVHSDWLRRYVQNS---------ATGVLDISAQLLGGLFQLLTLVLFAFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G GVP Sbjct: 169 DGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLQWLGVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + + A + + + + L+P Sbjct: 229 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYMLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + + F ++ G +G +G I +A + + + E Sbjct: 289 KLTAKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVRRYDVHDE 344 >gi|163752410|ref|ZP_02159603.1| permease PerM, putative [Shewanella benthica KT99] gi|161327707|gb|EDP98896.1| permease PerM, putative [Shewanella benthica KT99] Length = 360 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 108/304 (35%), Gaps = 14/304 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ +S+ + A + V + + ++ + L + LV+ + G+ Sbjct: 54 WPVAQ--MSRLGINRITAASLVLVVFVGIMLLLIFGLVPSIWKQGLALVTDLPTMLDKGL 111 Query: 105 PVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + +++ P + +L ++ + L T + I + + L Sbjct: 112 IIAQGYVNQYPQFVNPDQL--------DTMVHELKKMLDTQHLLDIGKQILGYSASLLVL 163 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I + + +FFF +D + + K+ + + I + G I + Sbjct: 164 MVYAILVPLLVFFFLKDKDELLRGCKRFIPT-NRDLAHKVWIEMNQQIFNYIRGKVIEIV 222 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 G+V + + + LGV+T +IP GA + +++ + I Sbjct: 223 IIGVVSYIFFAVMDLRYAALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGISPEFGYL 282 Query: 283 LWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 283 MLGYGIIQALDGNVLVPILFSDAVDLHPVFIIAAVLVFGGLWGVWGVFFAIPLASLVKAV 342 Query: 342 WKES 345 Sbjct: 343 LNAW 346 >gi|300309967|ref|YP_003774059.1| permease [Herbaspirillum seropedicae SmR1] gi|300072752|gb|ADJ62151.1| permease transmembrane transport protein [Herbaspirillum seropedicae SmR1] Length = 360 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 122/319 (38%), Gaps = 11/319 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 +P ++A IIG+ P S++ +A ++ L +L ++ Sbjct: 31 PMLSPFVAAGIIGYALNPGVDWIASRRLGPVRVPRFVAVTIMVLLL---ILAGLALVLIV 87 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + ++ ++ L P+ L+ +L +K L + T+ + Sbjct: 88 VPLVLRQIPLLQAQVPPLLDKLNAF-VSPRLHQLGIDVRLDLAGIKSLLTQQISTSSDEV 146 Query: 149 ---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + A G L + +++F+ + LF+ +D +++ L + ++ Sbjct: 147 WTSVLASAKVGGTALLTWLANLLFVPMVLFYLLQDWHQFIKRMQILIPRRWAGRINTMAA 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP---GGAPISF 262 V ++ G ++ + + A AG S + +GV+T ++ IP G + Sbjct: 207 EVDGLLGQYLRGQLLVMLVLAVYYSVALTAAGFDSALPVGVLTGLLVFIPYVGFGLGLVL 266 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L G I ++G ++ + L P LVG I L L F L+ + Sbjct: 267 AILAAILQFDGAIGLLWVALIYGVGQV-LESFILTPKLVGERIGLHPLVVIFALLAFGQL 325 Query: 323 MGLLGLFIGPVLMALIAVI 341 G +G+ + A+++VI Sbjct: 326 FGFVGVLLALPASAIVSVI 344 >gi|283769099|ref|ZP_06342004.1| membrane family protein [Bulleidia extructa W1219] gi|283104285|gb|EFC05663.1| membrane family protein [Bulleidia extructa W1219] Length = 365 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 121/353 (34%), Gaps = 20/353 (5%) Query: 8 PQGIMRWMIMFIILV----SLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEESST 60 Q I I+ +I++ +F++ F + L I+ + Y KK + Sbjct: 9 NQSIFLVFILVMIVLKIDWIFWFIQHFLSAFHSLLLGAILAYLVNITYVFLEKKKVQK-- 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+++ + + +L L + + E+ + + ++ + L + + Sbjct: 67 ------IVALVLAYFLIVLVLVTLLFVIIPEVSNSIGSLVKNLPATIQSLGENDHLKKYA 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDF-IPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + + F + F+ + + +I + Sbjct: 121 PMVVEQIQKVNWQSYVESMVHFVRTNVFNLASGTLNVVNSFVGLLSNGLIAVIFSIYLLA 180 Query: 180 DGFSISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + +++ + H W K ++ + + +G + A + ++ Sbjct: 181 NKSYLKKEISKIVHHFLKPTWVLKMKYAYGLLHQNFHNFIVGQLLEAFILSGLCMIGMFI 240 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 P +++G++ + +IP + +++ + L+ I I Sbjct: 241 FRFPYALSVGILVGFINIIPIIGAYIGGVIGAFMVFTVQPILSVFFILYLVILQQIESNL 300 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P +VG I LP + F +V G+ G+ +G L+A + +E + Sbjct: 301 IYPKVVGAKIGLPAIWVFVTVVIMGSLFGIGGMLVGIPLVATCHQVLQEELKK 353 >gi|254883331|ref|ZP_05256041.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643361|ref|ZP_07997987.1| permease [Bacteroides sp. 3_1_40A] gi|254836124|gb|EET16433.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384990|gb|EFV65943.1| permease [Bacteroides sp. 3_1_40A] Length = 378 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 130/365 (35%), Gaps = 19/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + + +R ++ ++++ + +L G P A +I + ++P+ F +K Sbjct: 1 MIQKKITFDSFIRGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLTYPMVIFFQNKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + ++++ + V+ + F + + E K+ + IPG Sbjct: 61 LRNRVISILVVLLVLLSI---ITLAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPG- 116 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIA 173 + +H+ + + L+E+ + +P+ + I S I ++ Sbjct: 117 -TVANFIKEHIDMLKIHEALNESNFANTMRNVLPQVWALLTQSVNIVFSVFTSFIILLYT 175 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF D +I++ L I V + F G +A G++ + Sbjct: 176 -FFILLDYEAIARGWIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGF 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCL--FLWGAI 287 + P + G+ ++ M+P I+F + L+ G F FL I Sbjct: 235 LIIDFPLAIGFGLFIGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCI 294 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 I D + P ++G L L MG++G+ I +L+ ++ I Sbjct: 295 VQIIQDGLIVPKVMGKITGLNPAIILLSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIR 354 Query: 348 AIKEN 352 ++ Sbjct: 355 IKEKE 359 >gi|187929927|ref|YP_001900414.1| hypothetical protein Rpic_2859 [Ralstonia pickettii 12J] gi|187726817|gb|ACD27982.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] Length = 356 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 119/346 (34%), Gaps = 14/346 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + L L L P + A I+ + P + Sbjct: 7 SQETKRTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRVPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V + L I+ L + ML + ++ + + A +P + +E+ Sbjct: 62 ----VLGVFLMILVLSVVGVALMLLILAVLQREIPAIHEQLPGMLAKLNAFLSPRLAEMG 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 L+ L L + D + R + G + + I +F+ D Sbjct: 118 LHVSFDFPGLRALLTEQLAASPDDVVARVLTYLRVSGSAAIQVLGIFFLVPIVMFYLLMD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++L++ + ++++ ++ G I+ + + + LAG Sbjct: 178 WNMLMRRLETAVPRRWLRKTRELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDV 237 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ T + IP A+ LL GN++ + + I F+ L P Sbjct: 238 ALPVGIFTGLAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LVG I L L L+ + G G+ + + A++ V ++ Sbjct: 298 RLVGERIGLHPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343 >gi|329961809|ref|ZP_08299823.1| hypothetical protein HMPREF9446_01394 [Bacteroides fluxus YIT 12057] gi|328531249|gb|EGF58093.1| hypothetical protein HMPREF9446_01394 [Bacteroides fluxus YIT 12057] Length = 374 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 116/342 (33%), Gaps = 15/342 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY-G 85 L G P A +I + ++P+ + F K + +++ + + +L Sbjct: 31 LSGVLLPFFIAWLIAYLTYPLVTFFQYKLRLKNRVISIFCALITLLAIGGAAFYLLVPPM 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ +G SE +++ ++ E L Sbjct: 91 IQEFGRVKDLLIEYFSNGAHDSN------VPKTLSEFLRENIDMQFLNQLFKEESLLDAL 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +PR S F +I L+ F D SI++ L + + + Sbjct: 145 KETVPRLWSLLSESVNLLFSFFTFFLILLYIVFILLDYESIAEGWAHLVPQKYRPFAVNL 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G +A+ G++ + + P + LG+ + M+P I F Sbjct: 205 FNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNMVPYLQVIGFV 264 Query: 264 AVSIYLLI----KGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I ++ G F A+ I D + P ++G L L Sbjct: 265 PTIILAILKAADTGGNFWIIIASATAVFAVVQAIQDGLIVPRVMGRITGLNPAIILLSLS 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 MG+LG+ I L L+ ++ I+ + + SS+ Sbjct: 325 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINRENIHKTESSD 366 >gi|15895070|ref|NP_348419.1| permease [Clostridium acetobutylicum ATCC 824] gi|15024766|gb|AAK79759.1|AE007688_8 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509208|gb|ADZ20844.1| permease [Clostridium acetobutylicum EA 2018] Length = 318 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 119/326 (36%), Gaps = 24/326 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ +V F+K +F P LS +I+ PIY+ K AV++ Sbjct: 5 KKLIECIILLLFFVVFTLFIKYYFKPFLSIVILTILCSPIYNLLSKHKVFGDRINAVLSI 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + + + ++ + ++ +P ++ + Sbjct: 65 IVINVMIFLAIFLIGNFIAQKLNIYLQHYHNVLD--------INKLPIIGESNVNILLNK 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + K+ + F K + + D L+ I++++F D + I Sbjct: 117 INVFVDKLFNADFFKKSAV------------YTTDGILTYFVSIMSVYFILVDKYDIV-- 162 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L E LF I I+S T + + + +++ G+ LG+I Sbjct: 163 --NLAEKLFTKNKVHILMKKFSDIKSLLRVETFLVLITTIQTIIGFFVLGIEDCFMLGII 220 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ ++P I I + + + I L + + + + +K+ Sbjct: 221 CGILDILPYVGTIIIFIPLIIYKMYEKNYVTIFGLIALYIFLQVSRQIMETNFMSSKLKI 280 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPV 333 L + G++ G++GLFI P+ Sbjct: 281 HPLIILISVYIGIKAFGIIGLFIAPI 306 >gi|257065304|ref|YP_003144976.1| predicted permease [Slackia heliotrinireducens DSM 20476] gi|256792957|gb|ACV23627.1| predicted permease [Slackia heliotrinireducens DSM 20476] Length = 400 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 102/285 (35%), Gaps = 5/285 (1%) Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A ++++ + ++ + + + LV A + + ++ IP + Sbjct: 91 AIITIVGIVGAIMVLVVPQFVGAINTLVQSAPAAVNNLLSNESLVALIPASVVDY----M 146 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L++ ++ ++ F + + + + IIF + L R I Sbjct: 147 KELDWNTVLADVTAALQSGIAGWLAGLSNTFTTMLI-WVMGIIFAMYFLASRDRVVPQIK 205 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + A + + ++ +G A+ G++ L +P + Sbjct: 206 RVAKAYMRPEWYAQGARFAELLDDSFHKYVVGQCTEAVILGVLCFIGMTLLRLPYASMIA 265 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + A+IP AV ++++ + + ++ + I + P +VG + Sbjct: 266 ALIGLTALIPIVGAYLGAAVGAFMILTFSWQQSLEFLVFIIVLQQIEGNFIYPKVVGTSV 325 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + + G G+ G+ + L+A + KE + + Sbjct: 326 GLSGVLVLAAVTIGGAVSGIFGMLVAVPLVAAGYRVLKEDVAKRE 370 >gi|223938116|ref|ZP_03630013.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223893160|gb|EEF59624.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 436 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 133/391 (34%), Gaps = 56/391 (14%) Query: 15 MIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ ++ + L G PV AL++ + P+ F+ ++ F ++ + + Sbjct: 29 LLVMLVWSVGWIVNALSGVLLPVAVALVLAYILDPVVEFFVRRRIPR-LFSILLVFLLGV 87 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + E ++LV P G + +W S Sbjct: 88 VIVTALLGSVVPGLVRETRKLVKDFPDTTHKLQSRFDHFLQTPLGHRLAMVWQHEASQGI 147 Query: 132 S--------------------------------------------LKILSETFLKTNGID 147 + + + L G+ Sbjct: 148 AHAGKPGTESSSSATNMVAVTGTNNVESPTNNAALGKPKTIANSPVDEVIIPALTKAGMW 207 Query: 148 FIPRFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + ++ + +++ + + + + LF+F + I+++ ++I Sbjct: 208 TLEWITNQLSKVTTWVEFLIGFVLVPVYLFYFLLEKKGITRRWTDYLPIHESKAKQEIVF 267 Query: 206 IVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I+ + F G ++A+ G ++ AY + G+ V LG + A++ ++P I+ Sbjct: 268 ILSSFNDCMIVFFRGQVLVALCVGGLMTIAYLIMGLNYAVLLGAVIAVLGIVPYLGTITG 327 Query: 263 TAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+++ + G+ + + A + D + P ++G L L ++ G Sbjct: 328 LALALIVAAVQYGDWGHPLAVIAIVASVKLLEDFVIIPKIIGDRAGLHPLTIMVAVMVGT 387 Query: 321 RTM-GLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +G + L AL+ + I + Sbjct: 388 TLLGGFIGAVLAIPLTALLRTLMFRYIWKRR 418 >gi|319780338|ref|YP_004139814.1| hypothetical protein Mesci_0592 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166226|gb|ADV09764.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 389 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 123/336 (36%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +F+ + +LYF + FF PVL A ++ T PI + K A + + Sbjct: 30 RSLLIGIFLFMAIYALYFARAFFMPVLLAFLLALTLTPI-VRLLRKHGIPEVISATLLVL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +C+F G L ++ + + G + L+ + E + Sbjct: 89 LSLCVF-------ATAGYLLSGPIIDLINNTSSIGQKLTERLAQL---RQPLEKIMQISH 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L S+ S L + + + F G +++ Sbjct: 139 QIEQLTETSQESGIQKVAVAQSGILSAAASNILSAGTGLTIIFVLSLFLLASGTMFYEKI 198 Query: 189 DSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ V + I L +TII G G V+ W GVP+ + GV Sbjct: 199 IQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTVIALGLWALGVPNPLVWGVA 258 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPI 305 A++ +P GA I+ V++ LI + L I IV+ + P +VG + Sbjct: 259 AALLNFLPYVGALITIVLVTVMALISFDTIFYALLAPAFVILCDIVEGQFVTPMVVGRRL 318 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + F + G +G + L+ +I V Sbjct: 319 EINAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVF 354 >gi|322374430|ref|ZP_08048944.1| membrane protein [Streptococcus sp. C300] gi|321279930|gb|EFX56969.1| membrane protein [Streptococcus sp. C300] Length = 369 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 114/338 (33%), Gaps = 8/338 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + PI + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L ++ + + + D+ + + +L + Sbjct: 89 VVYLLPILINQLTSL---IISSQNIYSRLQDLIIDLSMNPVFQNIDIQQTIQQLNLSYVD 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 146 ---ILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 + + I G+ I AI G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAIIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G I + I + + + I I L P +VGG +K+ + L Sbjct: 263 GPSIGLIPMVIANVFT-DPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLL 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G++G+ + ++ I K + +KE Sbjct: 322 LLSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|317497713|ref|ZP_07956028.1| hypothetical protein HMPREF0996_01009 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895047|gb|EFV17214.1| hypothetical protein HMPREF0996_01009 [Lachnospiraceae bacterium 5_1_63FAA] Length = 391 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 110/327 (33%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALII--GFTSW--PIYSSFISKKEES--STFLAVIATVSVMCLFIVPLL 79 L FF L A I+ + + + KK S +I+ + ++ IV L Sbjct: 50 ILFPFFMGFLIAYILNPVVAFFQRNVSIKLLKKKSASTQRGLAILISYLVMVGFIIVCLR 109 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 F+ ++EL + + + + + M+ ++ + Sbjct: 110 FIIPQLYDSIRELSLMIPDIYKSIMSIFEHYRENSTDMFPGQIADMIETKTLPKLFELTN 169 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L TN + + + F + ++ I I + + + + ++ F Sbjct: 170 NLLTNIVPMLYEASMSFAKGLFNLFIAFIVSIYMTIDKFILKNAGKRLVLAIFNENFSYR 229 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + +G +I ++ GL+ A + +P V + VI + MIP P Sbjct: 230 VLRTLKDCHNIFSGFIIGKSIDSLIIGLLAFVAMTILKLPYTVLISVIIGVTNMIPYFGP 289 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I ++L + + + L P ++G + L F + G Sbjct: 290 IIGAVPGAFILFIVSPTKCLIFIIMVFVLQQFDGLILGPKILGESTGVRPLLILFSITVG 349 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 G LG+F+G A + + + Sbjct: 350 GAYFGPLGMFLGVPFFATVQFLIGNWV 376 >gi|313623797|gb|EFR93928.1| membrane protein YdbI [Listeria innocua FSL J1-023] Length = 345 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 121/358 (33%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R + +I LY L+ +L I + + + + + + ++ Sbjct: 8 LQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + + ++ +LV + +E Sbjct: 68 LYVLIAGVIVFVFVKYIPVLADQINQLVKFGNSFLKT--------------DSNNEFINY 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S I+ G+ I + + G + ++ + ++ FF + Sbjct: 114 IVSLANQFDIMK---YTEQGVSMILTYLTNVGTVLMN----VFIALMLSLFFSLGKDHLI 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ + + + K+ IS Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEVNQPKDTISH 344 >gi|296133409|ref|YP_003640656.1| protein of unknown function UPF0118 [Thermincola sp. JR] gi|296031987|gb|ADG82755.1| protein of unknown function UPF0118 [Thermincola potens JR] Length = 359 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 112/314 (35%), Gaps = 13/314 (4%) Query: 5 MLNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 L + I R + + + V LY ++ P A++I + P + S++ Sbjct: 18 QLTRKKIYRLIFLITVPVLTGYLLYRVRRIMIPFALAVLIAYLLNPFVNMLESRRLPRG- 76 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++++ ++ + +F+ + + ++ ++ + R + I + Sbjct: 77 -------IAILLVYALVFVFITGLVTVGVPAIMDELTSFARAVPHFTREVQSI-VHEAEA 128 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L P + L + + + + + S+I + F+ +D Sbjct: 129 RYSRFVLPDPVKKVFDQKIKLVEAQLISLTGELAEGVVGIFSHLFSLIIAPVFAFYLLKD 188 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I + +L + + ++ + ++ G ++ + GL+ G Y L G+ Sbjct: 189 SGNIKKNFLALLPAGWRNDVQALTVDINEIFSKYIRGHLLVCVIVGLLTGVGYALVGLEY 248 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG+ I ++P P ++ L + + A + + + I + + P + Sbjct: 249 AFILGIFAGIADLVPYFGPFIGALPALMLALLESRVMALKVLIVVLVIQQIENSVISPKI 308 Query: 301 VGGPIKLPFLPTFF 314 +G + L L Sbjct: 309 IGDSLGLSPLVVII 322 >gi|257125219|ref|YP_003163333.1| hypothetical protein Lebu_0429 [Leptotrichia buccalis C-1013-b] gi|257049158|gb|ACV38342.1| protein of unknown function UPF0118 [Leptotrichia buccalis C-1013-b] Length = 371 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 97/285 (34%), Gaps = 16/285 (5%) Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + TF ++ +F+ +L + ++ L+ ++ Sbjct: 91 NRTFAILLVLSVFFIIFLYIILTIVPIITKQVSSLIDFLLKNQDKLQ------------N 138 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + +S + S+ + +N I + S F ++ IF I+ +F + Sbjct: 139 NFFGFLESNNIDLRSSLMSSKDIIISNAIKVLGSSFSLISSTFSLLFMTPIFTIMLIFSY 198 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +I + ++ + + + + I L + ++ G++ ++ Sbjct: 199 ----DNIENGVKRFFRNIGREDLIILIKNMDETIGKYILVTALDSMIVGIISFIIFYFLK 254 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + VI +IP P +I + + + I I ++ Sbjct: 255 MDYSMLFSVIVGFGNVIPFIGPFIGLIPAILYAFTKSFKLVILIVVLITIVQTIEANIVK 314 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+L G +++ + T ++ G G+ G FI + +I + W Sbjct: 315 PWLTGKSVEMHPITTLLVVLIGGALFGISGAFIAIPVYIIIKLTW 359 >gi|298491879|ref|YP_003722056.1| hypothetical protein Aazo_3225 ['Nostoc azollae' 0708] gi|298233797|gb|ADI64933.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 390 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 117/312 (37%), Gaps = 15/312 (4%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 A ++ A ++ F +P+ S++ ++ +A++ + + + + + LF + + Sbjct: 47 IAILVGASVLAFLLNYPV--SWMERRGARREQVAILVFLLALSILLALGVTLFPLALTQA 104 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++LV+++ G L++ M + + I Sbjct: 105 QQLVARLPELIDSGRSQLMILNEKAESMGLPINLDAIVVQINDRVKGQ--------LQAI 156 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ + L + ++ F+ + G + + L F + + R+ Sbjct: 157 AGQVLNLAVVTVTSLLDFLLTMVLTFYLLQHGGELWESLVEWLPTRFREPFSRTVRL--- 213 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ F+ I++I L ++ VP + G+ IMA+IP G A + L Sbjct: 214 SFQNFFISQLILSICMASALIPSFLWLKVPYGLLFGLTIGIMALIPFGGS-VGIAATTLL 272 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + +++ + I I++ + P ++G L + ++ G R GLLG+ Sbjct: 273 VSLQDVWMGARVLAAAVIVQQILENLIAPRILGSFTGLNPVWVLISVLTGARIGGLLGVI 332 Query: 330 IGPVLMALIAVI 341 + +I I Sbjct: 333 VAVPCAVVIKTI 344 >gi|56696016|ref|YP_166370.1| membrane protein [Ruegeria pomeroyi DSS-3] gi|56677753|gb|AAV94419.1| membrane protein [Ruegeria pomeroyi DSS-3] Length = 355 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 121/330 (36%), Gaps = 14/330 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + LY L P + I + P+ S + T++ + LF Sbjct: 14 LAAAVFVAVLYLLGDVLLPFVIGGAIAYFVDPVADRLERW-GLSRAAATAVITIASVLLF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ +L + + +M +L++ + Q + + + Q + Sbjct: 73 VLMVLMVVPALITQMIDLINVLPQLFQDL--------RTFVSTHFPSVLDRESNAHQMIA 124 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ET LK+ D + A G + L ++ + + + D + ++D L Sbjct: 125 SVIET-LKSRSGDLLQTLAGSVGSAI-NVVLLLVIVPVVSVYLLLDWDRMIARIDQLLPL 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + V+ S GM + + G A + G+ + +G+I ++ I Sbjct: 183 DHAPVIRRLAGEIDAVLASFVRGMGTVCLILGTYYAVALMIVGLQFGLVVGLIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L + G+ + + A+ + L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWLSIGLVAAIFALGQVVEGNLLTPKLVGSSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G +G+ I + A + V+ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVL 332 >gi|86138528|ref|ZP_01057101.1| membrane protein [Roseobacter sp. MED193] gi|85824588|gb|EAQ44790.1| membrane protein [Roseobacter sp. MED193] Length = 376 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 126/354 (35%), Gaps = 15/354 (4%) Query: 4 TMLNPQGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + W I ++ V ++ L P + I + PI + S + Sbjct: 18 ALPAKKQFKYWGIAALVFSVVMWALGDVLLPFVLGAAIAYLIDPIADRLET-MGLSRSTS 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V +M F++ LL L + +M +L + A Q + + P Sbjct: 77 TAVIVVLLMLFFLLALLVLLPTLINQMIDLTEILPKAFQDLRTFAQ--THFPSVFTEGSR 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ L+ GI+ I A + L+ + + + + + D Sbjct: 135 AQQTIASIVGT-------LQGKGIELIEGIAGS-AISLLNVLVLFVIVPVVAVYLLLDWD 186 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++D L +++ + V+ S GM + + G + G+ + Sbjct: 187 RMIARVDELLPRDHAPVIRRLMAQIDAVLASFIRGMGTVCLILGSYYAITLMIVGLNFGL 246 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPF 299 A+G I ++ IP + A++I L + G+ ++ + A I L P Sbjct: 247 AVGFIAGLVTFIPYLGALIGGALAIGLALFQFWGDWWSIGIVGAIFAFGQVIEGNYLTPK 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG + L + L G +G+ + L A + V+ + + +++ Sbjct: 307 LVGNSVGLHPVWLLLALSVFGALFGFVGMLVAVPLAAALGVVARFLVEQYLDSR 360 >gi|325181211|emb|CCA15625.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 776 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 76/202 (37%), Gaps = 10/202 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK---KISRIVPKVIRSTFL 216 F+ + F I +LF+ + ++ E L P + ++ + KVI F Sbjct: 344 FVSLGIRAFFFISSLFYLLC---TKWDPIERFVEDLLPIQNEKRPQVVHSIRKVIEGVFF 400 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNI 275 ++ LV ++ + +T ++++P P + ++ + + + Sbjct: 401 VPLKMSSLHALVTLISFSIVRADFVYLATTLTFFISIVPIIPPYLVCVPWALAIGVTSSF 460 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A LF I I+D L + L + +V GV G G+ GP+ + Sbjct: 461 IKALILFCVQYIAFTILDDMLY---EKSIVALNSYVSALSVVFGVYVFGFEGVIFGPLSV 517 Query: 336 ALIAVIWKESIMAIKENKEKIS 357 + ++ S I+ ++ ++ Sbjct: 518 CGVYFAYEVSNHGIQAAQDDVT 539 >gi|296167423|ref|ZP_06849824.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897232|gb|EFG76837.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 382 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 98/289 (33%), Gaps = 13/289 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ ++ + ++ L L F+ + + L +V + + + RWL Sbjct: 64 WLDRRGLPRGGAVALVLLTSFSLLGGILAFVVNQFIDGLPGLTEQVTRSIES---IRRWL 120 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D P + ++ + ++L+ + A + + + + Sbjct: 121 IDGPAHLRREQIDNAGNAAIEALRNNQAK---------LESGALSTAATITELVTAAVLV 171 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L FF G +I + + + R + ++A+ + +G Sbjct: 172 LFTLIFFLYGGRNIWAYVSKIFPAHVRDRVSEAGRAGYGSLTGYVRATFLVALTDAAGVG 231 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+P + L + + A IP GA +S + L+ + A Sbjct: 232 TGLAIMGIPLALPLASLVFLGAFIPLIGALVSGLLAVVVALLAKGMVYALITLGLLIAVN 291 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L+P ++G + + L + G G++G + +A + Sbjct: 292 QLEAHVLQPLVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFL 340 >gi|257388256|ref|YP_003178029.1| hypothetical protein Hmuk_2209 [Halomicrobium mukohataei DSM 12286] gi|257170563|gb|ACV48322.1| protein of unknown function UPF0118 [Halomicrobium mukohataei DSM 12286] Length = 393 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 125/354 (35%), Gaps = 30/354 (8%) Query: 16 IMFIILVSLYFLKG-FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + F++ +L F+ F + L + + + +Y + E+ + A ++ V ++ Sbjct: 18 LGFVLAAALVFVAYRFVGTFVFGLFVYYATRRLYRRVRRRIEQ-PSVAAGVSLVGMVLPA 76 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + ++ ++ A + D+ T L Sbjct: 77 LLLLAYTLGIALQQLSRFADEIDGAGSG-----SQIEDLLAMADPYLNLTVLSDPTALLD 131 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L T ++ + G L + M+ F+ RD + L Sbjct: 132 NLGGVGTITTTLESALGYLGVVGTGLLH----LFVMLALAFYLLRDDRRFAGWAGHLTAE 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VPSHVALGV 246 +++ V + F G + A+ GLV G Y L +P +GV Sbjct: 188 --RTVFEEFVAAVDESFDKVFYGNILNAMITGLVGGIVYTLLNQIAPASVAIPYAALVGV 245 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIELF--IVDKTLRPF 299 + ++IP G + + ++ YL + G + F + + I D +RP+ Sbjct: 246 LAGGASLIPIVGMKLVYVPMAAYLAVLAGTSGEGWWFVVAFAAVSFVVVDVIPDLLVRPY 305 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +L F + G G G+F+GP+++ L+ + + + ++ Sbjct: 306 V--SGGELHTGALMFAYILGPLIWGWYGIFLGPIVLVLVTHFARIVLPELVTDE 357 >gi|29829036|ref|NP_823670.1| hypothetical protein SAV_2494 [Streptomyces avermitilis MA-4680] gi|29606142|dbj|BAC70205.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 383 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 101/358 (28%), Gaps = 16/358 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + +I S F L G +L A + P S Sbjct: 1 MPRWLPRAMVLALALIAGFQFGSWAFHQLTGLLINILIAFFLALAIEPAVSWMAG-YGMR 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + M + + L ++ ++V I W++ Sbjct: 60 RGLATFLVFLGAMIVTAGFVTLLGSMLAGQIIKMVEGFPDYLDSVI---SWVNTTFHTDL 116 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L H L+ + L ++ + + F+F Sbjct: 117 RRVDIQDSLVHSDWLRRYVQNS---------ATGVLDVSAQVLGGLFQLLTIALFSFYFA 167 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + L S+ A + I ++A+ G+ G+ Sbjct: 168 ADGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYILLQSLGI 227 Query: 239 PSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P L V +++ IP A+ + + N + A + ++ + + L+ Sbjct: 228 PYAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLIFVVVYQQFENYMLQ 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L + + F ++ G +G +G I +A + + + Sbjct: 288 PKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|254369738|ref|ZP_04985748.1| hypothetical protein FTAG_01070 [Francisella tularensis subsp. holarctica FSC022] gi|157122697|gb|EDO66826.1| hypothetical protein FTAG_01070 [Francisella tularensis subsp. holarctica FSC022] Length = 368 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 116/356 (32%), Gaps = 6/356 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L F + AP+L+AL+I + + + + V+ Sbjct: 16 NNEPIVFVGLMLFFYLVLTFSGDYIAPILAALVIAYLLDTLVNILQKFTKLKRI---VLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I L +F + + +L+ V A+ + L ++ + Sbjct: 73 YIVYILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRI 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + +N FI + + + + + + + +F+F +D + Sbjct: 133 NSIVSWFDSIDWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + PK + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALYYVWNDLKPK-LADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP G I V + +L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADINL 367 >gi|120401222|ref|YP_951051.1| hypothetical protein Mvan_0195 [Mycobacterium vanbaalenii PYR-1] gi|119954040|gb|ABM11045.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii PYR-1] Length = 384 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 99/294 (33%), Gaps = 13/294 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F+ ++ + +S LF L F+ + LV +V + + V WL Sbjct: 69 FLDRRGAPRGGAVALVLLSGFALFGGLLAFVITQFVEGAPALVGQVTTSIEG---VGTWL 125 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +D P + ++ + ++L+ E + A + + + Sbjct: 126 TDGPLDVSPQQINQLRDAAIEALRSNQEK---------LTSGALSTAGTVTEIVTGALLV 176 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L F G +I + + + R + + ++A+ + +G Sbjct: 177 LFTLIFLLHGGRNIFAFVTKMFPVHVRDRVRDAGRAGFRSLIGYIRATFLVALVDATGIG 236 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + GVP + L + + A IP GA ++ I LI A Sbjct: 237 VGLAIMGVPLALPLASLVFLGAFIPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQ 296 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L+P ++G + + L + GG G++G + +A + + Sbjct: 297 QLEGHVLQPLVMGRAVAIHPLAIVLAIAGGGVLAGIVGALLAVPALAFVNSAMR 350 >gi|212635532|ref|YP_002312057.1| hypothetical protein swp_2742 [Shewanella piezotolerans WP3] gi|212557016|gb|ACJ29470.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 364 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 115/318 (36%), Gaps = 14/318 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ +++ + T A + + + L ++ L + L+ + G+ Sbjct: 54 WPVAQ--MARIGINRTTAASLVLILFIGLMLLISFGLIPSLWKQGVSLIGDLPSMIDKGL 111 Query: 105 -PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 ++++ P + ++L ++ + L T + I + + L Sbjct: 112 FTAQQFINQYPQFVNPTQL--------DTMVAELKKMLDTQHLLDIGKQLLGYSASLLVL 163 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I + + +FFF +D + + +K+ + + I + G I + Sbjct: 164 MVYAILVPLLVFFFLKDKDELLRASKRFFPS-NRDLARKVWNEMHQQIFNYIRGKIIEIV 222 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 G+V + + + + LGV+T + +IP GA + +++ + I + Sbjct: 223 IIGVVSYAFFAVMDLRYAALLGVLTGLSVLIPYVGATLVTLPIALVAFFQWGISSEFGYL 282 Query: 283 LWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 283 MIGYGIIQALDGNLLVPILFSDAVDLHPVFIIAAVLVFGGLWGVWGVFFAIPLASLVKAV 342 Query: 342 WKESIMAIKENKEKISSN 359 + +E + Sbjct: 343 INAWPVHGAAVEETAKAE 360 >gi|2281317|gb|AAC45502.1| OrfB; similar to a Streptococcus pneumoniae putative membrane protein encoded by GenBank Accession Number X99400; inactivation of the OrfB gene leads to UV-sensitivity and to decrease of homologous recombination (plasmidic test) [Lactococcus lactis subsp. cremoris MG1363] Length = 301 Score = 75.3 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 86/246 (34%), Gaps = 8/246 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 PV+ A + + PI ++ V+ + + + + + + + Sbjct: 60 PVILAAVFYYLLNPIVDFLEKRRVPR-----VLTIIVLFLIIAALIAWGLIVAIPNVISG 114 Query: 93 VSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + H + + ++ + + + +S+ + KT ++ + Sbjct: 115 VDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKTFSVNAVTT 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S +S+I LF+ RDG ++ + L + + K+ + + Sbjct: 175 L-SHLISKTTSILISLIVFPFVLFYLLRDGQRLNGFITHLLPNDWRKETSKVLHEINSQL 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 + G ++AI ++ + G+ VAL + + ++P G+ ++ + I L Sbjct: 234 SNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIPMVIVGL 293 Query: 271 IKGNIF 276 G Sbjct: 294 AIGGPL 299 >gi|209544129|ref|YP_002276358.1| hypothetical protein Gdia_1983 [Gluconacetobacter diazotrophicus PAl 5] gi|209531806|gb|ACI51743.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 408 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 122/348 (35%), Gaps = 7/348 (2%) Query: 1 MRETMLNPQGI-MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R + +PQ I + + + + +LYF P++ AL++ ++ Sbjct: 25 VRRSRFDPQTICLLILTVLAVFYTLYFAAAIILPIVLALVVNLLLSAPMRVLHTRLHLPK 84 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T A++ + V + + + + H + R + I Sbjct: 85 TLSALVLILGVFGVVGAIGTAISVPAAGWIARAPQTMAALQTHLAVLHRPIQMIQAANDR 144 Query: 120 SELWTKHLSHPQSLKILSETFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 E + +S Q + L ++ + F S + + + M++ LFF Sbjct: 145 IENFLSVVSGRQGGGGGGQVVLLAPSSSPGGGLGTFGSSVLLGTRAFVGQLFTMMLMLFF 204 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 G S+ ++ + +I+ + + + +TII + GL W+ Sbjct: 205 LLAQGDSLLRRFVEIMPTFADKRRAVQIAYQIERNVSLYLTTITIINVLVGLANMLQCWV 264 Query: 236 AGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G+P+ + GV+ ++ IP P+ + L + + A + Sbjct: 265 FGMPNPLLWGVLAFLLNYIPIIGPLTGIVIYFVVSLFVFPSALQALLPPTVYLCIHLMEG 324 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P ++ L + L+ G+ G F+ ++A+ +I Sbjct: 325 ETITPMVLARRFTLNPVLVMGSLMFWDWLWGVWGAFLSVPMLAVFKII 372 >gi|120610682|ref|YP_970360.1| hypothetical protein Aave_2002 [Acidovorax citrulli AAC00-1] gi|120589146|gb|ABM32586.1| protein of unknown function UPF0118 [Acidovorax citrulli AAC00-1] Length = 434 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 107/318 (33%), Gaps = 9/318 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL---FYYGML 87 F P++ +L++ PI ++ A + + ++ L + Sbjct: 103 FIPLMLSLLLTIALQPIVTALRRWYIPR-WLSAGVLLLGIVGGLGGTAWSLSDGAAELVD 161 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + KV A + + P L + E PQ+ + + ++ + Sbjct: 162 SLPVAARKVRDAMRTNMRGPSPLDTMQKAASQIEQAATESIPPQTRRGVQRVVIERAPFN 221 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW--KKISR 205 I + + + + ++ FF G ++L + ++ Sbjct: 222 -IRDYVWTGTVGLVSAAGQLTVVVFLTFFSLASGNLFRRKLVRIAGQSLERRKITMEVLD 280 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I+ L ++ G+ G AY L G+ + GV+ ++ + P I T Sbjct: 281 DITGQIQRYLLVQVATSVLVGIGTGVAYALLGLENAAVWGVVAGVLNLAPYVGSIVVTGA 340 Query: 266 SIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S + G + A + + IV L P+L ++ + F ++ Sbjct: 341 SALVAFLQFGTVDMALAIGGASLLIHTIVGNLLTPWLTSRTSRMSPVAVFVSVLAWGWLW 400 Query: 324 GLLGLFIGPVLMALIAVI 341 GL G+ +G +M ++ + Sbjct: 401 GLWGVLLGIPVMMVVKAV 418 >gi|92114935|ref|YP_574863.1| hypothetical protein Csal_2818 [Chromohalobacter salexigens DSM 3043] gi|91798025|gb|ABE60164.1| protein of unknown function UPF0118 [Chromohalobacter salexigens DSM 3043] Length = 363 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 104/325 (32%), Gaps = 14/325 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM-LEM 89 AP +AL++ F + + F + +V+ ++ L + + + Sbjct: 41 LAPFFTALVLAFLLEGVVAWFERR--GLPRLASVLLVFLFFIGALLALALIIMPLVWNQT 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ELV + G L + ++ T Sbjct: 99 VELVQEAPRMFASGQAWLDGLQSRYPTLITPAQIEDWIATAGREA--------TQLGQRA 150 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + L + ++ + I +FF +D ++Q L SL +I + Sbjct: 151 LTLSLASLGNLLGLLIYLVLVPILVFFLLKDRERLTQFLLSLLPR-KRVLMTRIWHEMDD 209 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I + G I + G+ + +W G+P L +I + ++P GA ++ V+ Sbjct: 210 QIANYIRGKAIEILIVGVAAFATFWAFGLPYTALLALIVGLSVLVPYIGAAVATLPVAAV 269 Query: 269 L-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + + A+ + L P L + L + ++ G G Sbjct: 270 AGFHFGISEQFAYVLIAYAVLQALDGNVLVPILFSEAVNLHPVSIILAVLFFGGIWGFWG 329 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 +F L L+ + + +++ Sbjct: 330 VFFAIPLATLLKALVQAWPRGVRDP 354 >gi|269960635|ref|ZP_06175007.1| permease PerM, putative [Vibrio harveyi 1DA3] gi|269834712|gb|EEZ88799.1| permease PerM, putative [Vibrio harveyi 1DA3] Length = 356 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 119/350 (34%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + TF + Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQMC--RLGIPRTFSVIT 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ + + ++++ +P Sbjct: 73 VILIFIGLMLIAVFGLVPTIWTQVGNLINDIP---NMYAGLQKFIATLP----QRYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + + + +I + + +FF +D + Sbjct: 126 NLEIVETVVTNAKNQAIGLGESVVKGSLASL-VSLATLAVYLILVPLLVFFLLKDKEEML 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K+ + + I + G + + G V + + + L Sbjct: 185 RMASGILPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEENEP 353 >gi|322514367|ref|ZP_08067416.1| PerM family permease [Actinobacillus ureae ATCC 25976] gi|322119737|gb|EFX91779.1| PerM family permease [Actinobacillus ureae ATCC 25976] Length = 354 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 112/343 (32%), Gaps = 13/343 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 ++ +PQ + I+ I +YF P+L A++ + WPI + + Sbjct: 10 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLVAIVFAYLLEWPI-RFLMRHFKFPRF 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ + L I + + + + + + WL +P Sbjct: 69 LSLVVVLGGFISLLIFLFMVMLPSLWNQAVTFIRDLPSMFNL---LNAWLEALPEHYPEL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + +LK F ++ + S G+ + + ++ FF +D Sbjct: 126 IDYAMLDTLMGNLKTKILGFGESLLTLSVHSIISLVGLGIYAFLVPLMV-----FFLLKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + I + G + + G+ + + + Sbjct: 181 KHIFVRSFVRMLPK-NRRLAANVWFEMQQQIANYIRGKFLEILIVGIATYALFLFFDLRY 239 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRP 298 + L V + ++P GA + V++ L + + L + ++D + P Sbjct: 240 PLLLSVAVGLSVLVPYIGAVLVTIPVALVALFQFGLSPEFYYLLLTFVISQLLDGNLVVP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 FL + L L ++ G G+F L L+ + Sbjct: 300 FLFSETVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|254852442|ref|ZP_05241790.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258605752|gb|EEW18360.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] Length = 384 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 116/358 (32%), Gaps = 25/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVHVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ LP TF L+ G+ GL +G + + I + + I Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILEVRNAEDLKKTNNI 341 >gi|225376591|ref|ZP_03753812.1| hypothetical protein ROSEINA2194_02233 [Roseburia inulinivorans DSM 16841] gi|225211474|gb|EEG93828.1| hypothetical protein ROSEINA2194_02233 [Roseburia inulinivorans DSM 16841] Length = 379 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 117/337 (34%), Gaps = 10/337 (2%) Query: 14 WMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W + +I L +F P + +I + P+ + + + + +VI V V+ Sbjct: 17 WAVFLLIFAFTLLPKLLIYFMPFVVGMIFAMIANPMVKFLEKRIKINRKYGSVIMIVLVI 76 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHP 130 L ++ + ++ + + + G ++ + +L Sbjct: 77 GLVVLACYGAGTILAKGIGAFMAYLPTMSANAGTEFSEAINQL--QQLLEKLPFTQNVDL 134 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + FL G D + I+ ++A +FF D + Sbjct: 135 SAIGTAIQDFLTNFVSSSDSATLGAIGEFAKSLPDMIVGIVVGLLAAYFFIADKDKLITG 194 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ F A ++I + + + F I ++L + V + Sbjct: 195 VEKHLSAGFLAKTERIYKQLVHAVGGYFKAQFKIMGVIYVILLIGLLILRVDFAWLIAFG 254 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A + M+P G ++ L G+ A + + + L +V + ++P L+G + Sbjct: 255 IAFLDMLPVFGTGTVLCPWAVIKLFTGDYKMAVGMIVLYVVSL-VVHQIVQPKLIGDSVG 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G R ++G+ + + ++ +++ Sbjct: 314 LDPFASLLFMFIGYRVGSVVGMILAIPIGMILINLYE 350 >gi|325663754|ref|ZP_08152158.1| hypothetical protein HMPREF0490_02899 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470247|gb|EGC73480.1| hypothetical protein HMPREF0490_02899 [Lachnospiraceae bacterium 4_1_37FAA] Length = 397 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 100/294 (34%), Gaps = 5/294 (1%) Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWT 124 + V + L + + + + ++ + + + + Q IP W D+ W Sbjct: 86 SLVLSIMLVLGIIFVVIFVVFPQLGKTILMLGESIQVFIPKLELWAEDLFQNNTGIIEWI 145 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I NG + + + + + + Sbjct: 146 ETMEFDWDKMIQGGIDFLRNGAGSVLNTTFAAAKSIVSGLTTFFISAVFACYILLQKKKL 205 Query: 185 SQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + Q+ + P I + + + G + A+ G + + + +P Sbjct: 206 TVQIQKVLYAFLPEKKVSTVLDICSLTYRTFSNFLTGQCMEAVILGTMFFISMSILRMPY 265 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +GV+ A A+IP + +L++ N A + + + + P + Sbjct: 266 ALLIGVLIAFTALIPIFGAFIGCVIGTFLILMVNPMQAIGFIVLFLVLQQVEGNLIYPHV 325 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 VGG + LP + + G MGL+G+ I ++++I +++ + K Sbjct: 326 VGGSVGLPSMWVLVAVSLGGSLMGLVGMLIFIPMVSVIYTLFRGYVYERLRKKN 379 >gi|221640239|ref|YP_002526501.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides KD131] gi|221161020|gb|ACM02000.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides KD131] Length = 375 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 113/326 (34%), Gaps = 14/326 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + I + PI A+I+ LL + + + Sbjct: 47 ILPFIVGGAIAYFLDPIADRLERAGLSRVAATALISVAM--------LLVVVLLVLSVIP 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LVS++ + R L +L + + Q+L + +T + G + Sbjct: 99 TLVSQLTALIDAAPTIFRQLHSFLL-DHFPQLSDETSTARQTLLSIGDTIKERGGE--VA 155 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ + ++ + + F+ D + ++DS + ++R + +V Sbjct: 156 NTLLTSAYGVINAMIFMVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRHLAREIDEV 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G + + G A G+ + +G I + IP + A++I L Sbjct: 216 LAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAIGLA 275 Query: 271 IK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + G+ + + A+ F+ + P LVGG + L L F L G +G Sbjct: 276 LFQFWGDWLSIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFGFVG 335 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 + + + A I V+ + I ++ Sbjct: 336 MLVAVPVAAAIGVLARFGIRQYTSSR 361 >gi|148984606|ref|ZP_01817874.1| hypothetical protein CGSSp3BS71_01142 [Streptococcus pneumoniae SP3-BS71] gi|147922997|gb|EDK74112.1| hypothetical protein CGSSp3BS71_01142 [Streptococcus pneumoniae SP3-BS71] Length = 316 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 107/301 (35%), Gaps = 10/301 (3%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 + PI + + + +I +++ ++ +++L + ++ L ++ + Sbjct: 1 MTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLSSL---IISSQTI 57 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 V + D+ L + +L + + N ++ + + Sbjct: 58 YSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNILNSVSNSVGSVLSALIS 114 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 L +I + L +F DG L+ + + + + I G++I A Sbjct: 115 TVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLKNLNATIARYISGVSIDA 174 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL 281 I G + Y + G+ + + + + +IP G I + I + + + Sbjct: 175 IIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIPMIIANIFTD--PHRLLI 232 Query: 282 FLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + + VD L P +VG +K+ + L+ G++G+ + +++ Sbjct: 233 AVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIVAVPTYSILKE 292 Query: 341 I 341 I Sbjct: 293 I 293 >gi|51473810|ref|YP_067567.1| permease [Rickettsia typhi str. Wilmington] gi|51460122|gb|AAU04085.1| possible permease [Rickettsia typhi str. Wilmington] Length = 351 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 121/352 (34%), Gaps = 11/352 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + + S + P A II + P SK E S+ F + I Sbjct: 1 MNRTAVFLLVFLTLSISSFMLIPDTIKPFFIAFIISYLLQPAIYFIESKLEISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L + ++ + +L ++++ Sbjct: 61 MYLIFLSIFFLIFTILVPI-------IYGQIFTLINNIPKYKDYLQSEILPPIMEKIYSI 113 Query: 126 HLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +K F+ + + I R+ +I ++ + + + I LF+F RD Sbjct: 114 EPDIADKIKHSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWNK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + SL +I + ++ S G I + A+ + G+ + Sbjct: 174 IIANMKSLLPIKTRPKILEILSAINNLLSSYIRGQLNICLLLSTYYSIAFTVIGLDLALL 233 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++T + +IP + I L G + + I L P ++ Sbjct: 234 LGILTGFLVIIPFLGTFISFLLTLIIGYLTFGITSKLLYIMIIYLIGNIGESYILTPKII 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L L F + G++G+F + + ++ I K +K Sbjct: 294 GDKIGLHPLWIIFAIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|46204696|ref|ZP_00049603.2| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 1/200 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + D I A + + FFF DG SI + L + Sbjct: 2 SENQDSIVSGALGAATTIGHVLAGALIALFCTFFFLLDGRSIWSWVVGLLPLRARDRVHQ 61 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R + + ++A + + +G + LG++ + + IP I Sbjct: 62 AGRRGIVTLAAYTRTQILVAAVDAVGIGVGAAFFVPSLALPLGILVFVGSFIPIVGAIVT 121 Query: 263 TAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++++ +L+ A + + I L+PFL+G + L + + G Sbjct: 122 GSIAVLVVLVAQGWVQALVMLGIVLLVQQIEGHILQPFLMGHAVSLHPVAVLLVVAAGSF 181 Query: 322 TMGLLGLFIGPVLMALIAVI 341 G++G + A++ + Sbjct: 182 AAGIVGALFAVPIAAVLNTV 201 >gi|110668929|ref|YP_658740.1| hypothetical protein HQ3040A [Haloquadratum walsbyi DSM 16790] gi|109626676|emb|CAJ53142.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 379 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 124/371 (33%), Gaps = 34/371 (9%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKG-FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +N + + + + FL F AP+ A+ + +++ Y + + + ++ A Sbjct: 1 MNARRFAVALFGLAVFSVIGFLAYEFIAPLTIAVFLYYSTR-KYYTLLERFRLPASIRAG 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA S+ I + + +LE + + + L + V W + Sbjct: 60 IALGSLAIPLIFLVSYAGVLLVLEARAFIDEYDLISVAAENV----------SWFGSVSR 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 Q L ++ T IDF AS + + L++ + I ++ DG I Sbjct: 110 VPEFTVQGLYNAYQSGQLTPLIDFATAHASVLTSMISQFTLNLFIITIVTYYLLVDGDKI 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL--------A 236 L + ++ + + S G + + L+ + + A Sbjct: 170 GAWLLRFDDEAI---IREYLEAADRELESVLFGNLLNVLSISLIAIGVFNVYNVFVPSPA 226 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI--------KGNIFNATCLFLWGAI 287 VP G +T I ++IP G I + ++I + + A L + + Sbjct: 227 EVPYPALAGGLTGIASLIPVVGMKIVYFPLTILSAVPILLGGNPSNLTYIAGLLVIAIVV 286 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 I D LRP L G G +G GLF P+L+ + ++ Sbjct: 287 IDTIPDIVLRPLLSGDET--HVGLLMLAYTLGPVVLGFYGLFFAPILLVIGLTFANTALP 344 Query: 348 AIKENKEKISS 358 + + Sbjct: 345 RLLNTANNADT 355 >gi|226945734|ref|YP_002800807.1| hypothetical protein Avin_36860 [Azotobacter vinelandii DJ] gi|226720661|gb|ACO79832.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 368 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 124/334 (37%), Gaps = 14/334 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F +Y L +P L +++ + P+ ++ + V+ +F + Sbjct: 13 VFFSGWLVYLLMPILSPFLIGILLAYLGDPLVDRLEARGLSRTW--------GVIAVFAL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L + + L ++V + + WL +P L Q Sbjct: 65 FGLLLVLALLFLLPSLGRQLVHLYELAPQMLDWLQQVVLPWVQVKLGLAKGFWHLEQLKS 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + KT N + + A+ G+ L + +++ + + F+ RD + +L +L Sbjct: 125 MFVGQLDKTTNVLTQLLSQATASGLALLAWLGNLLLVPVVSFYLLRDWDILVAKLRTLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +V+ + G ++ + G+V L G+ + +G++ + ++ Sbjct: 185 RRREGVVVGLVGECHEVLGAFLRGQMLVMLALGVVYALGLMLVGIDLGLLIGLLAGLASI 244 Query: 254 IPGGAPISFTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + ++ + G+ + + ++ + L P LVG I L + Sbjct: 245 VPYMGFVVGIGAALVAALFQFGGDPYPLIGVVAVFSVGQLLEGMLLTPLLVGDRIGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G + G G+ + + A+I V+ + Sbjct: 305 AVIFAVLAGGQLFGFTGVLLALPVAAVIMVLLRH 338 >gi|315282307|ref|ZP_07870742.1| membrane protein YdbI [Listeria marthii FSL S4-120] gi|313614043|gb|EFR87752.1| membrane protein YdbI [Listeria marthii FSL S4-120] Length = 345 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 115/361 (31%), Gaps = 26/361 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + + + ++ +LV + Sbjct: 65 VLLLYALIAAVIVFVFVKYIPVLADQINQLVKFGNTFLKT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +++ IIA+ + A W+ G P Sbjct: 164 HLVSFTNQFSTSKIAFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAFLTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP G IS ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILIVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTIS 343 Query: 358 S 358 Sbjct: 344 H 344 >gi|89891578|ref|ZP_01203082.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] gi|89516125|gb|EAS18788.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] Length = 367 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 122/343 (35%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++L ++ ++ + A +I PI + + +T +I + ++ + Sbjct: 25 VFVLLWFIWKIQSVLLYIGIAAVISLIGRPIVVFLRDRLKLHNTLAVIITILFILIILTG 84 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + L I + ++ + +I Sbjct: 85 VTYMIIPIMLEQGENL---------SRIDIEEVKGNLEVLNIEISEYFGIKRVNIFERIQ 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ ++ IP+F + + + + ++ FF +D + + + + Sbjct: 136 GLEYVQNFDVELIPQFVNGIFGTLGNIMIGLFSVVFIAFFLLKDSRLLVEGVLVFSKKGT 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + K++ F+G+ ++ + GV + + + A++ +IP Sbjct: 196 EGQFLRAFNKIKKLLSRYFIGLVFQVFVLFVLYSIILLIVGVENALIIAFFCALLNLIPY 255 Query: 257 GAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 P + + + +I N I + G + ++D + +P + G +K Sbjct: 256 LGPAIGSILMMGFVISDNLGADFTETILPKLIIVAIGYSIVQLIDNFINQPLIFGKSVKS 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G+LGL + + VI KE + K Sbjct: 316 HPLEIFIIILIAGLLFGILGLVLAIPTYTALKVISKEFLSEYK 358 >gi|323693991|ref|ZP_08108175.1| sporulation integral membrane protein [Clostridium symbiosum WAL-14673] gi|323501927|gb|EGB17805.1| sporulation integral membrane protein [Clostridium symbiosum WAL-14673] Length = 370 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 129/365 (35%), Gaps = 21/365 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWP----IYSSFISKKEESS 59 T + ++ + + +S F+ F P L + +I P + K+ + Sbjct: 5 TEKQRKALLTAGVTAAVYLSFKFILPLFLPFLVSYLIALILRPSANFLERKLRVKRRGKT 64 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYY-----GMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + + + I+ LL ++ +E +LV+ V + Q+ WL+ + Sbjct: 65 YAVPIGVIGGIEMILILALLGAGFFYGGRRLFMEANQLVNAVPVWVQNFD---EWLTGMC 121 Query: 115 GGMWASELWTKHLSH---PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + + + L + F + + S FG +++I I Sbjct: 122 HSVETFCRLQEGVLVKMVQDVLLGTARAFKNATMPNLVVNSVSVFGFFIKVAIITVILFI 181 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++ ++ +S+ F K+++ +R+ + + + + Sbjct: 182 ASILSLQEMDELRERRYNSIFRREFSLLGKRLALTGNAWLRTQAVILFLTTC----LCIL 237 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 G P ++ G+ ++ +P G I+L+++ + L + F Sbjct: 238 TLIAIGNPYYIIAGIGIGLLDALPIFGTGTVLIPWGIFLMLQQKWYQGVMLLGLYLVCYF 297 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + L+G + L L T + G++ G LG +GPV + LI + +E Sbjct: 298 MRE-FVEAKLMGKKMGLSPLETLMSMYVGLQLFGFLGFILGPVGLMLIEDLVEEYWKNGN 356 Query: 351 ENKEK 355 K Sbjct: 357 NTCNK 361 >gi|284045779|ref|YP_003396119.1| hypothetical protein Cwoe_4330 [Conexibacter woesei DSM 14684] gi|283950000|gb|ADB52744.1| protein of unknown function UPF0118 [Conexibacter woesei DSM 14684] Length = 358 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 130/358 (36%), Gaps = 16/358 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLK-GFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R ++ P + + F +V+L L G + A ++ P+ S+ + + Sbjct: 9 RVELIVPWRTLFTVAAFGAVVALAILSLGSLLSIFVAGVLALGLDPVVSALVRR-GWKRG 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV+ SV ++ +L ++++ ++++ PR+ ++ S Sbjct: 68 PAAVVVLASVFAAVVLIVLIAVGPLWDQVRDFIAEI----------PRYWEELTN----S 113 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + +S + T G+ LS++ + F + Sbjct: 114 AAFQRLISSGTQSDVSEALKDLTAGLPEAASTLLGAAGGIFGSLLSMVTLTFLALFLLME 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I+ L W + I S+ +G I++ V G + WL G+P Sbjct: 174 RPAITGWLFGFAPPEVEQRWHPVLEDSISAISSSLIGNVAISLVAATVAGLSSWLFGLPF 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L VI ++ +IP + + + + + A + + + + + + P + Sbjct: 234 PIVLAVIVGLLDLIPQVGATIAAVILVAVALTVSTEAAIAMLVIQLVYQQVENYVVYPLV 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++L T ++ +G++G + A+I ++ +E+ +E + + Sbjct: 294 YRRAVELTAFTTIVSVLVASSILGVVGAILAVPFAAVIKIVVREAGRPRRERMDALRE 351 >gi|254511545|ref|ZP_05123612.1| membrane protein [Rhodobacteraceae bacterium KLH11] gi|221535256|gb|EEE38244.1| membrane protein [Rhodobacteraceae bacterium KLH11] Length = 357 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 104/312 (33%), Gaps = 14/312 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + I + PI K S I T+ + F++ +L + + ++ +L Sbjct: 32 PFVIGGAIAYFLDPIADRME-KLGLSRMAATGIITIVGVLGFVLMILMVVPALITQLLDL 90 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + + S+ + + LK+ D + Sbjct: 91 IDTLPSLFKELRTFVE---------KQFPALLDRESNTHQMLVSFGETLKSKTGDVLQTV 141 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + G + + ++ + + + D + ++ L K+++ + V+ Sbjct: 142 LASLGSAI-NVVVLLVIVPVVAVYLLMDWDRMIARIGELLPRDHAPTIKRLAGEIDAVLA 200 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S GM + + G A L G+ + +G I ++ IP + ++I L + Sbjct: 201 SFVRGMGTVCLILGTYYAVALMLVGLQFGLIVGFIAGLVTFIPYLGALIGGTLAIGLALF 260 Query: 273 GNIF-NATCLFLWGAIELFIVD--KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 A + G + V L P LVG + L + L G +G+ Sbjct: 261 QFWGDWAHIGLVAGIFAIGQVTEGNFLTPKLVGSSVGLHPVWLLLALSVFGALFGFVGML 320 Query: 330 IGPVLMALIAVI 341 I + A + V+ Sbjct: 321 IAVPVAAALGVL 332 >gi|116622078|ref|YP_824234.1| hypothetical protein Acid_2965 [Candidatus Solibacter usitatus Ellin6076] gi|116225240|gb|ABJ83949.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 612 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 109/344 (31%), Gaps = 28/344 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I I+ ++ LY + F P+ A+ + P + + + T + + Sbjct: 12 SIRTAGILIGVIFVLYAAREIFVPLAFAITLALILSPAVAWLQTMRVAR-TLAVALVMMI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGIPVP-------------------R 108 + L +F + +L + + + I P Sbjct: 71 TIALACGTAWVIFNQLVDVANDLPRYQQNIDSKLKAIRAPGKGALGRATASVKELGKELS 130 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + P + + + + + P + ++++ F + ++ + Sbjct: 131 AVPATPAPIPGARIGRRPENQPGRPVAVQVVDEPATELEYVRDVVRPF---LGPFGVAGM 187 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 +I ++F + ++ +G + + +V R + ++ +G G + Sbjct: 188 VLIFSVFLLTKQNDLRNRLFRLVGLDQLNMMTQALDDATSRVSRYLLMQ-FLVNVGFGTL 246 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGA 286 G+ +L G+P V G + AI+ ++P I + L + N +FL A Sbjct: 247 CGAGLYLIGIPYAVLWGCVAAILRLVPYAGAIVAASLPFMLSLAVFDNWTPPLLVFLLFA 306 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + P L G + L V G GL + Sbjct: 307 TLEVGTGNFIEPMLYGAHTGISALALLLTTVFWTALWGPPGLIL 350 >gi|113477436|ref|YP_723497.1| hypothetical protein Tery_4001 [Trichodesmium erythraeum IMS101] gi|110168484|gb|ABG53024.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 368 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 122/338 (36%), Gaps = 15/338 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ ++ A+I+ + P+ + + VI ++++ I +L + Sbjct: 28 WQVRSLIVLLMIAVILAASISPLVN-LTERIRLPRWLGVVIVYLTLISGLISVVLIIGPQ 86 Query: 85 GMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFL 141 +++ L+ ++ L ++ ++S + W ++L+ + + L Sbjct: 87 VFEQIERLLRQLPLFSKSISDNFENFVSSLTQNPPDWINQLFDTKSVTSWVISSSQQLLL 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 ++ L +S+I + + D ++ + L + + Sbjct: 147 RSY----------SLTKGVLGSIVSLILALFISGYMVSDSQTLITSIVKLFPQPWDKRLE 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPI 260 V K + G I++ GL + G+ LG I A+ +IP PI Sbjct: 197 DQVIPVTKRMGGYIRGRIIVSAILGLATTTGLGFLGLQDFSLGLGAIAAVTNLIPFIGPI 256 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ + I + + + I I L P LVG + + L ++ GV Sbjct: 257 LGAVPALIVAIAKGGWLFLWVIILYYIIQNIETYILDPLLVGSSVGVHPLYQLLSVLVGV 316 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +G++G I P A A + + + K E I S Sbjct: 317 QLLGIIGALIIPPWFAGAAALVENLYLKPKLEAENIQS 354 >gi|298506490|gb|ADI85213.1| membrane protein UPF0118 [Geobacter sulfurreducens KN400] Length = 350 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 109/336 (32%), Gaps = 29/336 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFF-----APVLSALIIGFTSWPIYSSFISKKEESST 60 + P+ I L L G F + VL++L+I + P +K Sbjct: 1 MRPRDAAHIAWFLAITFGLVLLAGHFAVHSLSAVLTSLVIAYLLNPAMKFMEAKGLGRLP 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AV+ L + + + VPR++ ++ Sbjct: 61 AIAVLY-----------LAIAVGILLALILLIPYLSHQLEAFPRAVPRYVDNL---QLVM 106 Query: 121 ELWTKHLS------HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E W L+ L +E LK ++ + + F +++ I + Sbjct: 107 ETWKGRLTPYYGGEEGTWLIARAEESLKKLALELTGKGYQQLTRAFFG-LFNLVLAPILV 165 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF + + H ++++ + + + L + + G++ A + Sbjct: 166 FFMLYYKDFVKDLVLRFVPHRERPSFREMGGRIKRSLERFVLAQLLDCVIVGILSALALY 225 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNI-FNATCLFLWGAIELFI 291 G+ + G++ +++P + I G++ + I + I Sbjct: 226 AIGIEFPLLNGLVAGFASVVPFVGVMVAVIPPALIGYAETGDMSVIPLVCAAYFVISVII 285 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 ++P L+ G ++L L F L+ MG G Sbjct: 286 EGNLIKPLLMRGTLRLNPLAVIFVLMAMGELMGFWG 321 >gi|19746066|ref|NP_607202.1| hypothetical protein spyM18_1078 [Streptococcus pyogenes MGAS8232] gi|50914183|ref|YP_060155.1| hypothetical protein M6_Spy0837 [Streptococcus pyogenes MGAS10394] gi|139473790|ref|YP_001128506.1| hypothetical protein SpyM50949 [Streptococcus pyogenes str. Manfredo] gi|306827377|ref|ZP_07460664.1| possible permease [Streptococcus pyogenes ATCC 10782] gi|19748236|gb|AAL97701.1| hypothetical protein spyM18_1078 [Streptococcus pyogenes MGAS8232] gi|50903257|gb|AAT86972.1| Hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10394] gi|134272037|emb|CAM30276.1| putative membrane protein [Streptococcus pyogenes str. Manfredo] gi|304430524|gb|EFM33546.1| possible permease [Streptococcus pyogenes ATCC 10782] Length = 382 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 112/296 (37%), Gaps = 8/296 (2%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + F + + ++ + ++ +S + + I ++++ + Sbjct: 87 ICLLLAYLTFFILITWIISIVIPDLITSISTLTKFDTITIQ--EVVNNLEHNKLLARTIQ 144 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL--DYCLSIIFMIIALFFFYRDGF 182 ++ L + + F+ + + + +++ + + Sbjct: 145 -YIGGDGKLTETIANYSQQLLKQFLTVLTNILTSVTVIASAIINLFISFVFSLYVLASKE 203 Query: 183 SISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q ++L + Y K+I ++ + F+ T+ A+ G + S ++ +P Sbjct: 204 DLCRQGNTLVDTYTGKYAKRIHYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLP 263 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +GV+ A A+IP A+ L++ ++ A ++ I I + P Sbjct: 264 FAGTIGVLVAFTALIPVIGASIGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPK 323 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VGG I LP + + G G++G+ L A + + K++I + ++K Sbjct: 324 VVGGSIGLPAMWVLMAITIGASLKGIVGMITAVPLAATLYQVIKDNIQKRQAIQKK 379 >gi|313891995|ref|ZP_07825596.1| putative membrane protein [Dialister microaerophilus UPII 345-E] gi|313119638|gb|EFR42829.1| putative membrane protein [Dialister microaerophilus UPII 345-E] Length = 347 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 122/333 (36%), Gaps = 2/333 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +R I+ + + L+F P +L + P+ + FI K S++ Sbjct: 9 LRVTIVVFLGILLFFAPVVVFPFGISLFLAILLNPL-AKFIQKNILKLKIKWFPYDFSII 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 FIV + ++ G+ ++++ + L + + + + + Sbjct: 68 ISFIVFITIVYSIGVHIFVPFINELRAFIKSVPDTLNALQQLMMSLEKNYSLSLLPPEVK 127 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + + +F+ L +I + F+F + G SL Sbjct: 128 TVIARVIQNIGEYTLK-LAQFSISAVFSVASTLLELIVVPFITFYFMKKGRVFKDLFISL 186 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + V+ + G +++ + + + +P + +G++ ++ Sbjct: 187 FPERYSNRLNILFSEIYNVLHAYIRGQLLLSAIMTIFVCIGMSMFDIPYPLVIGLLAGVL 246 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 MIP PI I L + A + ++ + + P L+G IK+ + Sbjct: 247 EMIPIVGPIIGALPPIVLGLLQGTSTAIQVTIFYIFVQQLDAHLIMPKLMGSIIKVHPIV 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G++ G + G++G+ + +A++ ++ + Sbjct: 307 IIAGVLIGGQLYGVIGMMVSVPFIAVLQIVLRH 339 >gi|282899240|ref|ZP_06307213.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281195876|gb|EFA70800.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 359 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 122/341 (35%), Gaps = 15/341 (4%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +W+ + ++VSLY L + + +A+++ T + + ++ Sbjct: 2 KLGQWIGLIALVVSLYILWQLREVLLLIFAAVVLATTLNRL-ARTCQNLGIKRGLAVFLS 60 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + + +EL +V + V W+ + + Sbjct: 61 VMFFLVGIVAFFWVIVPPFVHQFQELTLRVPQGFER---VNTWVDE--QRSHIPQELEPV 115 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L ++ + + + + F L L+I+ +++ F + + + Sbjct: 116 IPDLNRLIAEAQPLI-----NRVLGNSFAFVSGSLVLVLNILLVLVLTAMFLTNPAAYQK 170 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + I + G I GL+ + GV + +ALGV Sbjct: 171 LFVRLFPSFYRRRVEGILNQCEDSLERWLTGAFIAVCVVGLMSLIGLSILGVKAALALGV 230 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +M +IP P ++ + + + + + + I + P ++ + Sbjct: 231 LAGLMNLIPNLGPTMSVVPAMAIALLDSPWKPIFVLILYFFIQQIESNFITPMVMAHQVS 290 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L T + V G LGLF+ + + ++A IW + ++ Sbjct: 291 LLPAVTLISQLFFVTFFGFLGLFLA-LPLTVVAKIWIQEVL 330 >gi|75907179|ref|YP_321475.1| hypothetical protein Ava_0956 [Anabaena variabilis ATCC 29413] gi|75700904|gb|ABA20580.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 367 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 111/321 (34%), Gaps = 15/321 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ + K + A+++ F +P+ S + K+ + V + + I Sbjct: 27 LVFAFFQYFKPLVTIFVLAILLAFVLNYPVSS--LQKRGIKRGNAVGLVFVLTVIILIAS 84 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + + E+ + L + L+D G + L+ Sbjct: 85 GVTLLPIAIEQFHEIAKVLPLWIDSSQEKLQNLNDWAVGQHFKLNIGQILTRIIDKIPDE 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + I I ++ F+ DG I + + + L Sbjct: 145 LESVSNQTFKIIVETVDSISEA--------IVTVVITFYLLVDGQRIWEGI---FKKLPI 193 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + +K+++ + K ++ +G +A+ G + V + G+ +++IP G Sbjct: 194 SLAQKLNQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLFGLGVGFLSLIPFG 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + V ++ + + A + + I+D+ + P L+G L + L+ Sbjct: 254 D-VVSLIVITLIVATHDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLL 312 Query: 318 GGVRTMGLLGLFIGPVLMALI 338 G GLLGL I + LI Sbjct: 313 VGTYIGGLLGLLIAVPVAGLI 333 >gi|237735950|ref|ZP_04566431.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229381695|gb|EEO31786.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 365 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 108/330 (32%), Gaps = 17/330 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVPLLFLFY 83 P++ ++ + P+ + ++ +++V+ + I+ L +L Sbjct: 40 PIIIGGVLAYFLEPLVQMVTKLFENCQSSFLKKHRRVLSVLLVSLAVILMIILLLTWLIP 99 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M E + V + + I L + Q+ ++ Sbjct: 100 MVMDYAVEFAKNIDT------YVKSFEASINSSFEDPNLAGTIIQVEQTFVDSIKSLSAN 153 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + ++ I FA + G L + +IF L + + + Sbjct: 154 DFMEVIA-FAGKTGSTLLTILMGLIFCPYILIEAEKLARIFDRFMLCFISQENLNLIHGY 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + ++ + G I ++ GL+ + L G+P L + I MIP G I Sbjct: 213 AIKSHRIFGNFIYGKFIDSVIIGLIALVGFGLMGLPFFPLLAFVVFITNMIPYFGPFIGG 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V +L+ I A L+ L P ++G + + + Sbjct: 273 VPVVFIVLLTNGIMPAIWTALFIFALQQFDGLILGPRILGDSVGISPFWIICSITIFGSL 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G LG+F+G L+ +I + + + + K Sbjct: 333 FGFLGMFLGVPLICVIRMFFNDFLEYRKNR 362 >gi|331087276|ref|ZP_08336346.1| hypothetical protein HMPREF0987_02649 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408962|gb|EGG88423.1| hypothetical protein HMPREF0987_02649 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 397 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 100/294 (34%), Gaps = 5/294 (1%) Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWT 124 + V + L + + + + ++ + + + + Q IP W D+ W Sbjct: 86 SLVLSIMLVLGIIFVVIFVVFPQLGKTILMLGESIQVFIPKLELWAEDLFQNNTGIIEWI 145 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I NG + + + + + + Sbjct: 146 ETMEFDWDKMIQGGIDFLRNGAGSVLNTTFAAAKSIVSGLTTFFISAVFACYILLQKKKL 205 Query: 185 SQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + Q+ + P I + + + G + A+ G + + + +P Sbjct: 206 TVQIQKVLYAFLPEKKVSTVLDICSLTYRTFSNFLTGQCMEAVILGTMFFISMSILKMPY 265 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +GV+ A A+IP + +L++ N A + + + + P + Sbjct: 266 ALLIGVLIAFTALIPIFGAFIGCVIGTFLILMVNPMQAIGFIVLFLVLQQVEGNLIYPHV 325 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 VGG + LP + + G MGL+G+ I ++++I +++ + K Sbjct: 326 VGGSVGLPSMWVLVAVSLGGSLMGLVGMLIFIPMVSVIYTLFRGYVYERLRKKN 379 >gi|317125914|ref|YP_004100026.1| hypothetical protein Intca_2798 [Intrasporangium calvum DSM 43043] gi|315590002|gb|ADU49299.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 419 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 104/329 (31%), Gaps = 29/329 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ A + P + + I + + ++ Sbjct: 71 IFTLILAFLASIAMEPAVARLSQSMQ--RGLATAIVMFGSLLALAAFIFVFGRLLSDQIG 128 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 V P + D+ WASE + L + + L L G + Sbjct: 129 TFAESV----------PALVEDL--TKWASERFGIDLDYQKLLDRL------GVGTSTLT 170 Query: 151 RFASRFGMIFLDYCLSIIFMIIALF-------FFYRDGFSISQQLDSLGEHLFPAYWKKI 203 A L + LS++ + +F DG + + + L + Sbjct: 171 TVAQNLAGGVLGFLLSVVAAAFSTLTFAFFAFYFSADGPRLRRWIGQLVPQRQQEVFGLA 230 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGAPIS 261 + + ++A G + + + G+P +ALG+ T ++A +P G I+ Sbjct: 231 WDLAVRKTGGYVSARVVLAAINGGLTAAFMLVIGMPYWLALGIWTGVVAQFVPTVGTYIA 290 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + LI + + + + I + TL P + + + +F ++ G Sbjct: 291 IALPVVIGLIGDQPWQGLAVLAFAVVYQQIENVTLEPRISASAVNVHPAVSFGAVLFGAS 350 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G F+ + AL+ ++ + Sbjct: 351 LFGIGGAFVAVPVAALLLALFDIYSHKYE 379 >gi|326803654|ref|YP_004321472.1| hypothetical protein HMPREF9243_1249 [Aerococcus urinae ACS-120-V-Col10a] gi|326651429|gb|AEA01612.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a] Length = 388 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 106/336 (31%), Gaps = 7/336 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPI---YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F A I+ I F K T + +S++ + ++ +F Sbjct: 40 VISPFLVGAAIAFILSIPVNYIEKYLKRFDYFKRHRKTLRGLAIVLSLILIVLLIYFLIF 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + S + + V + + + L + Sbjct: 100 LVLPDFEDTITSFISIVPTTISQVISKVMRFIDRHPELVTYIQQLDINLNNLAQRAIAFV 159 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + G+ ++ ++ ++ ++++Q+ + + W Sbjct: 160 QSLATNLLSQTFTIGIGLVNSLFNLFISLVFGITVVSAKETLTRQVKKVIYAICNLPWAN 219 Query: 203 IS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ V + G + A G+++ + P + + VI +IP Sbjct: 220 YLVNVGKLANDVFTNFVSGQVLEAFILGIMVYIGMLICHFPYALTISVIMGASGLIPIFG 279 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I L++ + A ++ + + + P +VGG + LP L T + Sbjct: 280 AIFGAVAGAMLIVVTSPTKAILFIIFITVVQQLEGNIIYPRVVGGSVGLPGLWTLVAVTV 339 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G GL G+ + +++I + +I + KE Sbjct: 340 GGAFFGLPGMLLSVPTVSVIYQLTAATINHRLDLKE 375 >gi|283783584|ref|YP_003374338.1| hypothetical protein HMPREF0424_1139 [Gardnerella vaginalis 409-05] gi|298252961|ref|ZP_06976755.1| permease of the PurR regulon [Gardnerella vaginalis 5-1] gi|283441589|gb|ADB14055.1| putative membrane protein [Gardnerella vaginalis 409-05] gi|297533325|gb|EFH72209.1| permease of the PurR regulon [Gardnerella vaginalis 5-1] Length = 526 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 106/341 (31%), Gaps = 19/341 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAV 64 + ++ I+ + + L+F + ++ ++I P+ I + Sbjct: 45 RALIYVAIITFVSIFLWFAWNSISFIVFDVVISIFIALAMEPLVVRLIKH-GWRRGVASG 103 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + + L ++ +V + + Sbjct: 104 FTLTGLLVVISLLLALFGNLFAQQVVSMVMGLPDLYNQ------------FANFVLHYTG 151 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + L + ++T+ + A + L ++ +I+ ++ G ++ Sbjct: 152 FKMPNIEQLGMEILKHVQTSWVVDFAGQALNTTWGLMTVLLDLLTIIMVTYYISAAGPAM 211 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + I +V + I S I+A + + +P + L Sbjct: 212 RRSMCRWMNPQSQRRFLFIWSVVQEQISSFLFSRIILAAINAVGTAIFLIVMNIPYWLPL 271 Query: 245 GVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + I++ +P G + + A ++ I I + + P + Sbjct: 272 SLFCGIVSQFVPTIGGYLGGALPILVAWGSNGFGAAVATLIFITIYQQIENMVISPKISE 331 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L F ++ G LG F+ + A + I++ Sbjct: 332 KTMDLNPAVAFISVLVMGAVFGALGAFLALPVTASLQAIFR 372 >gi|220909201|ref|YP_002484512.1| hypothetical protein Cyan7425_3833 [Cyanothece sp. PCC 7425] gi|219865812|gb|ACL46151.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 364 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 127/340 (37%), Gaps = 18/340 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L YF + ++ A ++ F + + LA++ +++ L +V + Sbjct: 30 LLLFFEYFREP-ITILIVAAVLAFLLDHPFRWLEQRGVGRGLALAMVLGSALLLLMLVGI 88 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + A+Q + W+ + + LW + P +L S Sbjct: 89 TLLPVL-----------IHQAHQLALASGDWIHSGKQQLVSLNLWLGNQGIPLNLINPST 137 Query: 139 TFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + + + + + I + G + Q + + L Sbjct: 138 LLTGHFSDQLQTLLSHLPNLIVRTVGGLFEGVLTAIITIYLLIKGEVLWQGILTW---LP 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P ++ +P R+ F+G +A+ G L A+ L +P + GV +MA+ P Sbjct: 195 PKLARQTRTTLPCSFRNYFIGQGTLALLLGTALVIAFLLVQIPFGLLFGVFIGLMALFPF 254 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G IS T V++ + +K + + + IV+ + P L+G ++ + L Sbjct: 255 GGAISITLVTLIVALK-SFSLGLTVLAIATVVDQIVENGIAPRLLGHLTRVHPVWVILTL 313 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G G+LG+ + L + I + + N+ +I Sbjct: 314 LIGGHIAGVLGVILAVPLASFIKDVVEVYRPQSGVNQTRI 353 >gi|192292736|ref|YP_001993341.1| hypothetical protein Rpal_4370 [Rhodopseudomonas palustris TIE-1] gi|192286485|gb|ACF02866.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 652 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 122/355 (34%), Gaps = 30/355 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ II+ +LY + F PV A+++ F + S + + +A I TV Sbjct: 22 TILAVIIISALYVGREVFVPVALAILLSFVLARPVNFLQSLRVPRA--IAAITTVLFAFA 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS----DIPGGMWASELWTKHLSH 129 I L L + + + + + Q I R ++ + + +K L+ Sbjct: 80 VIFALGSLIATQLSRLADDLPQYQSTIQSKITSLRGVTGGSTTLERAEGMLQNLSKELNK 139 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRDG----- 181 P++ S + T + L S+I +I+ G Sbjct: 140 PKNAPAPSLSNPPTTSSRPVTPVPVEVLQPDPGTLANLRSLIAPLISP--LATTGIIVIF 197 Query: 182 --------FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + +L L + FL +I G G+++G+ Sbjct: 198 VIFILLQREDLRNRLIRLAGTRDLQRTTAALDDAASRLSRLFLNQLLINSGFGVLIGTGL 257 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 W+ GVPS G++ A++ +P I A + L + + + + +W AI F+++ Sbjct: 258 WIIGVPSPALWGILAAVLRFVPYIGSIISAAFPLTLAVAVDPGWS--MLVWTAILFFVIE 315 Query: 294 ----KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P + G L + G +GL + L + V+ + Sbjct: 316 PAIAHVVEPMVYGRSTGLSPVAVVISATFWTALWGPIGLVLATPLTVCLVVLGRH 370 >gi|288800743|ref|ZP_06406200.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332204|gb|EFC70685.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] Length = 366 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 62/377 (16%), Positives = 145/377 (38%), Gaps = 31/377 (8%) Query: 1 MRETMLNPQGIMRWM-IMFIILVSLYF---LKGFFAPVLSALIIGFTSWP--------IY 48 M E + ++RW+ I+ + +S + L G P A + + +P ++ Sbjct: 1 MIEQKITFDKLVRWVGIVAAVGLSCWIINSLSGVLLPFFIAWLFAYLLYPIVIFVQNKLH 60 Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + + L +I V+ L I P++ F + ++ N+ + Sbjct: 61 VKIRALSIIIALLLVLIVIGGVVYLIIPPMINQFTKLGPIISSYAAQKGTVNEVTRYIQE 120 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 W+++ + + H K ++T KT + + + I + S I Sbjct: 121 WIAE----------HHQMIEHYFRSKEFTDTLQKT--LPQVFSVLGQTASIVISIVASFI 168 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++ +FF D +++ + + ++W+ +++ V + + + G ++A+ G++ Sbjct: 169 TLLY-MFFILLDYEYLTENWIKIFPKKYRSFWEALAQDVERELNNYIRGQGMVALCMGIM 227 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-----NIFNATCL-F 282 + + P + LG++ I+ ++P + + L+K N + L Sbjct: 228 FCIGFTIIDFPMAIGLGILIGILDLVPYLHSFAVIPTAFLALLKAADTGQNFWWVFGLAL 287 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + I D + P ++G + L + L +G +GL + L LI V W Sbjct: 288 LVFMVVQIITDMVVVPKVMGKTMGLNPVILLLSLSIWGTLLGFIGLIVALPLTTLIIVYW 347 Query: 343 KESIMAIKENKEKISSN 359 + + EN+ + + Sbjct: 348 QRYVTKEVENENNLKKD 364 >gi|284008475|emb|CBA74962.1| putative permease [Arsenophonus nasoniae] Length = 354 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 125/352 (35%), Gaps = 24/352 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R +PQ + ++ + I ++F AP+L A+++ + WP + K S Sbjct: 10 RRRFSDPQVVALFISLIIGFCIIFFFHDILAPLLVAIVLAYLLEWPTQK--LGKLGLSRL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A I M + + L + + L+ +P ++ A Sbjct: 68 AAASIVLTIFMGISAMVFLIIVPIVWQQGMNLL----------FDLPSMVNSFNEYAKAL 117 Query: 121 ELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + ++++ + + + +++ + + + ++ + + +FF Sbjct: 118 PERYPALVDAGIIDMIADNLRNRLSTLGESVVKYSVASLIGIITIAIYLVLVPLMVFFLL 177 Query: 179 RDGFSISQQLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +D + + L + L W+++++ + IR + M I+ G+ A+ Sbjct: 178 KDKTRMIRGLQRILPRDRLLVGQVWQEMNQQITNYIRGKVIEMMIV----GICTYIAFAF 233 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVD 293 G+ + L V+ I +IP GA + V + L + I L + I + Sbjct: 234 LGLRYSLFLSVLVGISVLIPYIGAVVVTIPVVLVALFQWGIGPDFWTLLIAYLIVQGLDG 293 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P L + L L +V G G+F L LI + Sbjct: 294 NLLVPILFSEAVNLHPLVIILSVVVFGGLWGFWGVFFAIPLATLIKAVMHVW 345 >gi|257469202|ref|ZP_05633296.1| permease [Fusobacterium ulcerans ATCC 49185] Length = 376 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 113/329 (34%), Gaps = 2/329 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+ P++ A+ I P+ S + + I V V+ + + Sbjct: 39 GYLIPMIYAVFISIFLEPLVSKIEQRFKLERWVAVAIVIVLVIIGVAGFVGLILPQLGKS 98 Query: 89 MKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 KEL +K+ Q G + R L + + + SL + L+ GI Sbjct: 99 FKELYNKLPHMQEQLGSLIKRVLDYLKEKELLVIGEKQIEDNIISLLKRNIGNLQEFGIS 158 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + + + + L I L + Y Sbjct: 159 VLLNIV-WWTIALSKFFIGFFLAVFILLDKEYFIRFIKNILAIIFGKEKGMYLSDFLNQS 217 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 V+ + G I + G++ +LAGVP + ++ + MIP I A++I Sbjct: 218 RNVLLNYVWGRIIASAFVGVITFVVLFLAGVPYALLSSLMIGMGNMIPYVGSIVAGAIAI 277 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L+I LFL I + + P +V + + ++ G MG +G Sbjct: 278 FLVILAEPSKIGYLFLAMIIGQTVDGWIVGPKIVSETVGMSTFWVIVAVLIGGSVMGPMG 337 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKI 356 +F G +I +I++ + I+ I Sbjct: 338 MFFGVPAFGIIKLIYETQLKKIENGSTNI 366 >gi|94268176|ref|ZP_01291111.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93451703|gb|EAT02478.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 309 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 70/219 (31%), Gaps = 3/219 (1%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + + + ++ + +FF +D I + A + Sbjct: 89 GALGQHVLAISLASVVNIITLLVYLVLVPFLVFFLLKDKDLIMNWISLRLPRERGA-AQD 147 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + R + + + G + G + ++ + V V L +T + ++P GA + Sbjct: 148 LWRDLDAQMGNYVRGKFWEILIVGGITFISFTILRVDYAVLLATLTGLSVLVPYVGAVVV 207 Query: 262 FTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V + + + + L + I + L P L + L + ++ Sbjct: 208 TIPVLLVGYFQWGVGSELAWLLIAYGIIQTLDGNVLNPLLFAKAVNLHPVAIIGAILIFG 267 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+F L L+ + +E+ + Sbjct: 268 GLWGFWGIFFAIPLATLVNALIITWPRNPDPEEEEAQAQ 306 >gi|271969818|ref|YP_003344014.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270512993|gb|ACZ91271.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 423 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 111/301 (36%), Gaps = 14/301 (4%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K+ + + + V+ +F V L + + + V K+ P+++ Sbjct: 136 LQKRGLARVVAITVVFLGVIAVFAVFGLAVVPPLTTQSTDFVEKL----------PQYVQ 185 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++ +L + Q L+ L + + + FG + + + + ++ Sbjct: 186 ELQNNPMIRDLDQRF----QILEKLQQYVTSGDFGSQMFGGVLGFGQVLIGAVFNALTVL 241 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + +F S+ + L + + I G II++ G+ Sbjct: 242 VLTLYFLGSLNSLKKMAYRLVPKSRRTRAGLLGDKIIDSIGGYVAGNLIISLIAGVTTFF 301 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 VP +AL +I A+ +IP V+ + + ++ + + Sbjct: 302 FLIAMKVPYALALALIVALTDLIPMVGAFIGAGVASLVGFFVSPTVGIICVIFFTVYQQV 361 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + P ++ + +P L T G + G +G++G +G L+A + +I +E +M +E Sbjct: 362 ENYWIAPSVMKSSVDVPPLATIVGALVGGALLGVVGALLGIPLVAALLLIVREVVMPRQE 421 Query: 352 N 352 Sbjct: 422 Q 422 >gi|254517606|ref|ZP_05129662.1| sporulation integral membrane protein YtvI [Clostridium sp. 7_2_43FAA] gi|226911355|gb|EEH96556.1| sporulation integral membrane protein YtvI [Clostridium sp. 7_2_43FAA] Length = 357 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 129/346 (37%), Gaps = 13/346 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + I+ + + I+ +Y + F P + I F P+ +S K + Sbjct: 5 KKREFIINTLYLLIVATIIYIAIKYGLGWFLPFVIGFGIAFILKPLINSISKKFGLNRKV 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG----- 116 +A I + + L +E+K++ + L N + + + + G Sbjct: 65 VAGITVLIFYTTVGALITVLIVKLFVELKDVF--IKLPNLYTTTIEPVILQLSSGFEDIL 122 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + S S + ++ + F S + + +IF IIA FF Sbjct: 123 IKLDPTLMQAIRDMISSLTESLGSIISSISSGVVVFISSTVTTVPTFFIIVIFSIIASFF 182 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F D +I+ + + + + + +II + L + Sbjct: 183 FAMDYTNITTFITRQFSERASSIIFDVKDYIVGTLFKFIKAYSIIISVTFIELAIGLSIL 242 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V S + + ++ A + ++P G I LI+G+I A L + + + IV Sbjct: 243 RVESAITIALLIACVDVLPVLGTGGIVIPWIIIELIRGDIGLAVGLTIIY-VVITIVRNV 301 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P +VG I L + + GV+ G LGLF+ P+++ ++ + Sbjct: 302 LEPKVVGQQIGLHPIVMLMCMFIGVKIFGFLGLFVLPIIVIILKNL 347 >gi|225017609|ref|ZP_03706801.1| hypothetical protein CLOSTMETH_01537 [Clostridium methylpentosum DSM 5476] gi|224949574|gb|EEG30783.1| hypothetical protein CLOSTMETH_01537 [Clostridium methylpentosum DSM 5476] Length = 360 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 122/351 (34%), Gaps = 12/351 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK-----GFFAPVLSALIIGFTSWPIYSSFISKK 55 M + + + FI++ + FL + P + I F PI +K Sbjct: 1 MDGRTERRRSFIINAVYFILIFGIGFLLFKYAVPYVLPFIIGFAIAFMLKPIVRFLSTKL 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIP 114 + F + + L + L FL + + +L I P+ ++ Sbjct: 61 RLNHRFCGAVVILLAYALLALVLWFLGARLVSALTDLFGNAEQYFDIYIAPLLEKINSFT 120 Query: 115 G---GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + + +L + Q + ++ + + + + A G + ++ F I Sbjct: 121 VETISVLSPDLAPQANDLFQGVIQSLQSGIVSLSGNVVGSLA-NIGAKIPGFLVAFAFTI 179 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++ F D + L + ++ I I+ I + L Sbjct: 180 MSSIFISMDYNQFTSFLLRQLPKRWRDMAFEVKGYFVGTILRYLRAYLILMIITFVELSI 239 Query: 232 AYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + + + I A+ +P G + L+KGN L + I + Sbjct: 240 GFGVIGIGNPIGVAAIIALCDALPVLGTGGIVIPWILLELLKGNYQLVIGLTV-VYIIVT 298 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +V + P ++G + L + T + G + +G+ G+ + P+ + +I + Sbjct: 299 VVRNFIEPKVIGQQLGLHPIVTLVSIYIGFKLIGVAGMILFPIFVQIIVSL 349 >gi|254796579|ref|YP_003081415.1| permease, PerM family [Neorickettsia risticii str. Illinois] gi|254589824|gb|ACT69186.1| permease, PerM family [Neorickettsia risticii str. Illinois] Length = 327 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 15/326 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + I+ + + + S +++ + L I+ L ++ Sbjct: 2 LFAFAFSFILAYFLNRSTTKLAALI-GSRGIASLLVVTFLSILVILVLSLAIPLLYHQLI 60 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDF 148 + P+ ++ I + S + + L E L Sbjct: 61 LFLKGA----------PQLIAYIENSIKTSSPGLHSFLEERGMSSLFEYLLSLVPQLSTK 110 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I + ++ + + +IF + LF+ +D ++ + + + ++ Sbjct: 111 ITQHLWNSTLVLANIVILLIFTPVILFYLLQDWPKMTNAIKEIIPLKHRTTFNNQVTLMD 170 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 I LG I+ G++ + AG+P + +GV T ++ +IP I+ S Sbjct: 171 ASISGYVLGQMKISFILGVLYTVLLFFAGMPYYFLIGVSTGMLTIIPYFGNITGLITSHL 230 Query: 269 LLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + +I + + L I L P L+ + L L F + G GL Sbjct: 231 VALSRASSILDVLPITLIFIFCGAIEGMFLSPKLLSKSVNLHPLWVIFSMTVGGMLFGLA 290 Query: 327 GLFIGPVLMALIAVIWKESIMAIKEN 352 G+ + + A +A + I K++ Sbjct: 291 GILLAVPVAATVAGFVRLGISYYKDS 316 >gi|86606622|ref|YP_475385.1| hypothetical protein CYA_1978 [Synechococcus sp. JA-3-3Ab] gi|86555164|gb|ABD00122.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 378 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 112/320 (35%), Gaps = 8/320 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ V +A+++ + + +I ++V+ I+ L + Sbjct: 20 WQIRQILLLVFAAIVLAVALDTLAQ-IPQRYGFRRGPSLLITGLTVLVGAILVGLIVVPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ L + V A GI + L + +++ L + + T L Sbjct: 79 LADQLRRLFTDGVPA---GIVQAQRLFESLILSLPTDIELPTLRELANSLVPQATELVRQ 135 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 DF F L+++F+II D + S+ S+ + + I Sbjct: 136 VRDFFSES----FTAFFATLLNLLFVIILTILLLVDPQAYSRAFVSVFPAFYRPRVRYIL 191 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R +G+ + L+ G W+ GVP +A V+ + IP P Sbjct: 192 KRCELALRGWLVGILFTSSLVMLLSGIGLWILGVPLSLANAVLAGLFNFIPNIGPTLSVV 251 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + + P ++ + L T V G Sbjct: 252 APMLVALTDAPWKSLAVLGLYIFIQQLESSVFTPLVMSRQVSLLPALTLVAQVTSAFFFG 311 Query: 325 LLGLFIGPVLMALIAVIWKE 344 +LGLF+ L A++ V +E Sbjct: 312 VLGLFLAVPLAAILQVWIQE 331 >gi|223940687|ref|ZP_03632527.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223890657|gb|EEF57178.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 360 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 103/305 (33%), Gaps = 20/305 (6%) Query: 44 SWPIYSSFISK-KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P++ +S+ LA + + + L + E + K+ + Sbjct: 52 FRPLFRWTARHHWPKSAGILACGSILFCSTALV--FGLLVPAISKQGTEFIQKLPEFKER 109 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + P P L + S + ++ + + A +G + L+ Sbjct: 110 ILQSP------PASGVVRNLADRFFSASAY-----------SNLEPLLKKAVTWGGVGLE 152 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++I + +G + + L + + + +V+ +G I + Sbjct: 153 RMAEFFLVLILSLYLIAEGDRVYRWLIAFLPEEQRRKTAAAAEEITEVVSQYVVGNIITS 212 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G+ + L VP+ L V+ I ++P FT ++ L + ++ A + Sbjct: 213 VICGIYAFTVLKLLHVPNAALLAVMAGIFDLLPIIGFFLFTIPAVLLALTVSVKAAMLVA 272 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + + P + G ++L L + G++G+ + ++A I Sbjct: 273 ILYSAYHLAENYFIVPKVYGNRLRLSELTVLISCLAAGLIAGVIGVLLVLPIIASYPTIE 332 Query: 343 KESIM 347 + + Sbjct: 333 RIWLR 337 >gi|169631595|ref|YP_001705244.1| hypothetical protein MAB_4521c [Mycobacterium abscessus ATCC 19977] gi|169243562|emb|CAM64590.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 399 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 109/337 (32%), Gaps = 16/337 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +L + LK P+L AL+ P + K + V+ ++ + Sbjct: 32 LTVLWLFWHLKTITIPLLLALMGSALLVPTVNFLQRHKIPR-SLAVVVVLLTGTAAIVGI 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L F+ + + +L +++ + + + S ++ L Sbjct: 91 LTFVVDQFIKGLPDLSAQLTNS----------IESLKNWAIHSRFHISEDQIGKAGDALV 140 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T G + A + + + FF G I + + + Sbjct: 141 NTIKDNQGR--VTSGALATATTVTEIITGAVLTLFTTIFFLYGGKEIWEFVTRIFPTAVR 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + + +A+ + + +G VP + L + + A IP Sbjct: 199 PRVRRAGVLGFGSLIGYVRATVAVALVDAIGIGVGLAAFSVPLALPLASLVFLGAFIPII 258 Query: 258 APIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 F AV I L+ KG A L + + + + L+P ++G +++ L Sbjct: 259 GAAISGFVAVFIALITKGAFTAAMILVIV-IVVMQVEGHVLQPLIMGHAVQIHALAVVLA 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G G++G + +A++ + I + Sbjct: 318 IAAGGVLGGIIGALLAVPTVAVLNTAIRALIEPFDAD 354 >gi|16331485|ref|NP_442213.1| hypothetical protein sll0063 [Synechocystis sp. PCC 6803] gi|8928467|sp|Q55147|Y063_SYNY3 RecName: Full=UPF0118 membrane protein sll0063 gi|1001141|dbj|BAA10283.1| sll0063 [Synechocystis sp. PCC 6803] Length = 395 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 118/312 (37%), Gaps = 22/312 (7%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF F +++++I ++P+ +++ K+ A ++ + +F + L Sbjct: 53 YFESLFVISLIASVIAFLLNYPV--AWLEKQGAKRFVAASFVFLTALIIFTALGVTLIPL 110 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + ++LV+++ P WL + + + L P + L Sbjct: 111 ALSQAQQLVARL----------PDWLDSGQKQLVLLDQKAEILGWPVNFDGLIPQINSRL 160 Query: 145 GIDF------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + A + + L ++ II F+ + Q + F Sbjct: 161 AAELQNLAGSTLNLALSLTVFTVVRLLDVLLTIILTFYLLLHTDDVWQSIIGWLPERF-- 218 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K S + + ++ FLG + A L L S + L VP + G+ +MA+IP G Sbjct: 219 -QKPFSDTLRRSFQNYFLGQLVSATCMALGLISGFLLLKVPFGLLFGLTVGVMALIPFGG 277 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + V+ +L+ +I A L + IV+ + P ++G L L+ Sbjct: 278 SVGIVLVT-FLVALRDIGMALQLLAVALVIQQIVENGIAPRVLGSVTGLNPFWVLISLLT 336 Query: 319 GVRTMGLLGLFI 330 G R GLLG+ + Sbjct: 337 GARIGGLLGVIV 348 >gi|326778235|ref|ZP_08237500.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|326658568|gb|EGE43414.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 368 Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 102/299 (34%), Gaps = 21/299 (7%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ I++ + + A + +++ + + + ++V + A Q Sbjct: 58 PVHRWLIAR-GLNRSLAAGLTCAALVAVVGGAGYIVVTALIDSGDQIVDSLKDAGQ---- 112 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W+ L ++ L ++ ++ G S + Sbjct: 113 ---WV--------VDHLDIAGATNVDDLADNAKGLVEKFGASAAGGLLSGI-SLVGSLVA 160 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + ++ FFF RD ++ + + R + + G T IA+ + Sbjct: 161 TSVLALLLTFFFLRDSDRAVNLAHAVAPRGTGDLVEAMGRRAFEAVEGFMRGTTFIALID 220 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + + VP V LG + + A IP AV++ L+ + L+ G Sbjct: 221 AVCITVGLLILDVPGAVGLGALVFVGAYIPYLGAFISGAVAV-LVALADRGFVIALWALG 279 Query: 286 AI--ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + + L+P + +++ L G GLLG+ + P+ A V+ Sbjct: 280 VVLAVQVLEGHVLQPMIQSRTVQMHPAMIMIALTAGASVAGLLGMLLAVPLCAAAFGVL 338 >gi|300811539|ref|ZP_07092028.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497479|gb|EFK32512.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 357 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 115/354 (32%), Gaps = 27/354 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAV 64 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 10 KNNIHLRRATVLVMIILALYYVRTMMNTILLTFIFTYLIVHLVRFVQGKFKHVSDKLIVA 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L L + + ++ ++ V+ Q W Sbjct: 70 LTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQTN----------------DVGWL 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H + + +K++ F +S + ++ FF+ + + Sbjct: 114 MTQLHKYVSEKTISSQVKSSLTALTAAL-----KGFGSVTMSFVMALVLSFFYTIELKEM 168 Query: 185 SQQLDSLGEH----LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S + R +IAI + + +P Sbjct: 169 QTFSQSFLKSDLFGWLFEDIAYFGRKFTNTFGVVLEAQFLIAICNTALTIVCLAIMKMPQ 228 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ALG++ I +++P G IS +S+ G I + + + A+ + L P Sbjct: 229 IFALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPK 288 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +LP TF L+ G G+ GL + + I + K+ K Sbjct: 289 FMSSKTELPIFYTFVVLLFGEHFFGIWGLIVSVPIFTFFLDILGVKNINSKQEK 342 >gi|253997933|ref|YP_003049996.1| hypothetical protein Msip34_0220 [Methylovorus sp. SIP3-4] gi|313199998|ref|YP_004038656.1| hypothetical protein MPQ_0231 [Methylovorus sp. MP688] gi|253984612|gb|ACT49469.1| protein of unknown function UPF0118 [Methylovorus sp. SIP3-4] gi|312439314|gb|ADQ83420.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 359 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 123/327 (37%), Gaps = 11/327 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 AP L A I + P+ + T +A++ VM + L+ + +L Sbjct: 30 PIMAPFLIAAIFAYICNPLVDRLAQVRLWQFTLGRTVASLLVMLM----LIAIICILLLI 85 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + ++ K + +P W + + + + + + DF Sbjct: 86 VIPMMQKEFMLIMEKLPTYITGLRTRIEPWLLQHFGVAIDIDAAKVQQVISSNWKSASDF 145 Query: 149 IPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + +F G+ + +++ + I LF+ RD I + D L + A +I+R Sbjct: 146 VGKFLLALSDHGLALFAWLANLVLIPIVLFYLLRDWHDILNRFDQLLPRRWYAKTVEIAR 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP---GGAPISF 262 V ++ G + + + WL+G+ + +G+I ++ +P G + Sbjct: 206 EVDMMLAEFLRGQLSVMLLMSAFYATGLWLSGLELALPIGLIAGLLGFVPYLGIGTGMLL 265 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A++ L + ++G I + L P+LVG I L + F L+ G + Sbjct: 266 AALASVLQFTTFAQYVPVIAVFG-IGQMLESMWLTPWLVGDRIGLHPVMVIFALLAGGQL 324 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G G+ + + A IAV + + A Sbjct: 325 FGFTGILLALPVSAAIAVGLRHAKRAY 351 >gi|298209195|ref|YP_003717374.1| permease [Croceibacter atlanticus HTCC2559] gi|83849122|gb|EAP86991.1| permease [Croceibacter atlanticus HTCC2559] Length = 362 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 123/335 (36%), Gaps = 18/335 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ + A ++ P F+ K + +AVI + + + L+ LF Sbjct: 28 WEIQSVIIYIGIAAVLSLIGRPA-VLFMRHKLKLPNLVAVIIVLVIFLSIFIGLILLFVP 86 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++E N I + + +D+ + F+K Sbjct: 87 IIVE--------QSQNLSQIDIDAFRTDLNDLNRQINEFLGVNQINIVEGFKQSDFVKNF 138 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I +P+F + + + +I FF +D + + + +K++ Sbjct: 139 EITSVPKFLNNVFGSLGSGLIGLFSIIFISFFLLKDSKLLLNSVLAFSNRGDEDRFKRVF 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + ++ F+G+T L+ G+ + +A+ I A + +IP P Sbjct: 199 HTIKILLSRYFVGLTFQITILFLLYAIILMSFGIDNAIAIAFICAFLNLIPYLGPTIAGV 258 Query: 265 VSIYLLIK---GNIFNATC---LFLWGAIELF--IVDKTL-RPFLVGGPIKLPFLPTFFG 315 + + +I G+ F+A L G++ + I+D + +P + G ++ L F Sbjct: 259 LMMMFVISSNLGSNFSAIILPKLIKVGSLYIACQILDNFIFQPLIFGKSVRSHPLEIFLV 318 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G+LG+ + + VI KES+ K Sbjct: 319 ILIAGLVFGVLGMVVAVPAYTALKVIAKESLGEYK 353 >gi|254450657|ref|ZP_05064094.1| membrane protein [Octadecabacter antarcticus 238] gi|198265063|gb|EDY89333.1| membrane protein [Octadecabacter antarcticus 238] Length = 350 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 119/337 (35%), Gaps = 21/337 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + +I + PI K S V+ T+S + +F + L + + ++ Sbjct: 5 LTPFILGSVIAYFLDPIADRLE-KWGLSRVMATVVITLSGVLIFFLLFLLVVPTLIGQLG 63 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L+S + Q L + G + + + +++ G D + Sbjct: 64 QLISTIGEIIQDLPQTWVSLKEWLSGRFPN--LDLDGTFMLDQMTSLGNAVQSRGGDLVA 121 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S ++ + ++ + + F+ D + Q+D+L + ++R + + Sbjct: 122 ALLSS-AQGLINVVVLLVIVPVVTFYMLMDWDRMVAQVDNLLPRDHQETVRDLARQIDRT 180 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS----FTAVS 266 + S G + + G A LAG+ + +G I +++ IP + ++ Sbjct: 181 LASFIRGQGTVCVILGTYYAVALMLAGLNFGLIVGFIAGLISFIPYIGALVGGVLAIGLA 240 Query: 267 IYLLIKG-------------NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 ++ G N + + A F L P LVG + L + Sbjct: 241 LFQWWGGTEVIDGETVQHSINWLRISIVAGVFAFGQFFEGNILTPKLVGNSVGLHPVWLI 300 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L +G +G+ + + A+I V+ + I K Sbjct: 301 LALSVFGSLLGFVGMLVAVPVAAVIGVVARFLIAEYK 337 >gi|153814163|ref|ZP_01966831.1| hypothetical protein RUMTOR_00372 [Ruminococcus torques ATCC 27756] gi|317499961|ref|ZP_07958197.1| hypothetical protein HMPREF1026_00139 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087816|ref|ZP_08336741.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 3_1_46FAA] gi|145848559|gb|EDK25477.1| hypothetical protein RUMTOR_00372 [Ruminococcus torques ATCC 27756] gi|316898678|gb|EFV20713.1| hypothetical protein HMPREF1026_00139 [Lachnospiraceae bacterium 8_1_57FAA] gi|330409511|gb|EGG88952.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 3_1_46FAA] Length = 384 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 104/329 (31%), Gaps = 8/329 (2%) Query: 9 QGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 Q +R + + + GF P + II + P+ + + + Sbjct: 9 QVGIRLLFSLAATAAFVIIGIKAIGFLMPFVIGWIISAVAAPLVNWLEKRLRIVKKLGSA 68 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG--MWASEL 122 + + V+ + L +LE+ LV + D G E+ Sbjct: 69 LIVILVLGGIVGILYLGISRLILEVASLVRDFPSIYAQLESGLSQIGDTLSGVFDRLPEV 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S + + + A Y +S + I++ +FF Sbjct: 129 VQNGWNTVASNLDQYMGKVVSGISEPTVSAAGNIAKRVPYYLVSFVVAIMSAYFFIVQRE 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L + +S + + F I L+L + G+ V Sbjct: 189 DVLAWLKKVAPVSVQKRMTLVSDNLKYALGGYFKAQFKIMGVVFLILAAGLGFMGIGYFV 248 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + + + +P G + ++Y G+ L + I +V + L+P +V Sbjct: 249 LVAFLISFLDFLPFFGTGTAMIPWAVYQFFMGDYKMTVSLVVLYVITQ-VVRQLLQPKMV 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + L L T L G + GLL + + Sbjct: 308 GDSVGLNPLVTLLLLYVGYKAGGLLWMIL 336 >gi|328956536|ref|YP_004373922.1| UPF0118 membrane protein YueF [Carnobacterium sp. 17-4] gi|328672860|gb|AEB28906.1| UPF0118 membrane protein YueF [Carnobacterium sp. 17-4] Length = 343 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 7/311 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F PVLSA + + P+ + K + ++ ++ + + ++ F M ++ Sbjct: 26 FIPVLSAGFLFYLLNPL-IKVMQKLKIKRSYAIILVMFLFLGGATIFIIKTFPILMHQLS 84 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +LV+ + S L + LS + Sbjct: 85 DLVANSPAI------LSDIEIQTKDIALLSPFNNVDLDETLNQLNLSLDAFSKTILSSFT 138 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S + + +I + I LF+ + DG + + L + + ++ V Sbjct: 139 TSISSIVGAIANLTIVLITVPIVLFYMFHDGEKLQLAVTHLFPIRYQKHVFELLHQTNLV 198 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I + G + +I +++ + + G+P + L ++ +IP P +I + Sbjct: 199 ITAYISGKGLASIVVAVLMYFGFLIIGLPYTLLLAIVNGFTNLIPYIGPFIGAVPAIIVA 258 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + L + + L P VG + + L L+ + +G++G+ Sbjct: 259 LTISPTTALLVALIVLVVQQLDANFLTPKFVGKSLAIHPLTIIIILLVAGKMLGIIGIIF 318 Query: 331 GPVLMALIAVI 341 G A+I I Sbjct: 319 GVPAFAVIKTI 329 >gi|319782650|ref|YP_004142126.1| hypothetical protein Mesci_2946 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168538|gb|ADV12076.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 661 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 113/345 (32%), Gaps = 22/345 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + +LYF + F P+ AL++ F P+ ++ KK AVIA+V Sbjct: 36 IVTTVAALYFGREVFLPIAIALLLTFALAPLVAAL--KKLGIPRIAAVIASVLGAFAA-- 91 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + ++ EL + + + + R L + G +K + Sbjct: 92 -LGLFSFIVATQVSELAQNIPVYQTNILTKIRSLKETGVGGGILARLSKVVERVGQEIDR 150 Query: 137 SETFLKTNGIDFIPR---------------FASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L + PR + S +I+ + F + Sbjct: 151 QDPSLPVATPEKPPREPVPVEIVAHERPLQVLQNVVGPLISPLGSAGLIIVVVIFMLLER 210 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + + + K + L ++ I + + W G+P+ Sbjct: 211 EDLRDRFIRLVGYGDLHRTTEALQDAAKRVGRYLLMQLVVNIVYAIPIAIGLWALGIPNA 270 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPF 299 + G++ + +P PI + ++L + + L+ + I + P+ Sbjct: 271 LLWGLLALALRFVPYIGPIIGMLLPLFLALAVAPGWSLVLWTAALFVVMELITGNVIEPW 330 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G L L + G LGL + L + V+ + Sbjct: 331 LYGSRTGLSPLAIIVAAIFWTWLWGPLGLILSTPLTVCLVVLGRH 375 >gi|218295848|ref|ZP_03496628.1| protein of unknown function UPF0118 [Thermus aquaticus Y51MC23] gi|218243586|gb|EED10114.1| protein of unknown function UPF0118 [Thermus aquaticus Y51MC23] Length = 365 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 92/295 (31%), Gaps = 14/295 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L+A + + P+ F +++ + V V + L + + EL Sbjct: 40 LLTAFAFAYLAHPLVRFFEARRLPR-----ALGVVLVYLGLGLFLGLASFLTAQTVVELS 94 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI---- 149 + P WL +P + A + + L+ + Sbjct: 95 RLAQELPRLLDPFLAWLLSLPDRVRAVPVPESLKPILAEASRNLQGLLQGFLETLLRFVQ 154 Query: 150 -----PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F + ++ + +F D + + + ++ Sbjct: 155 GLLGQGGNLLGFFASLVGGVFQLLAALTLSIYFLYDLPRLGRAALLAFPEPYQPLVADLA 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R + + + G ++A GL++G L GVP +LG + + +IP I Sbjct: 215 RKLDRSVGGYVRGQLLVAFLVGLIVGVGLSLVGVPLAASLGFLAGVFNLIPFVGVIVSGV 274 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ L G + FL + + P +VG +L + ++ G Sbjct: 275 PALLLAATGGLVKVLLAFLVLWLANQLEGNLFGPLIVGRATRLHPVTAIAAILVG 329 >gi|126174019|ref|YP_001050168.1| hypothetical protein Sbal_1792 [Shewanella baltica OS155] gi|153000310|ref|YP_001365991.1| hypothetical protein Shew185_1785 [Shewanella baltica OS185] gi|160874944|ref|YP_001554260.1| hypothetical protein Sbal195_1829 [Shewanella baltica OS195] gi|217973659|ref|YP_002358410.1| hypothetical protein Sbal223_2493 [Shewanella baltica OS223] gi|125997224|gb|ABN61299.1| protein of unknown function UPF0118 [Shewanella baltica OS155] gi|151364928|gb|ABS07928.1| protein of unknown function UPF0118 [Shewanella baltica OS185] gi|160860466|gb|ABX49000.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|217498794|gb|ACK46987.1| protein of unknown function UPF0118 [Shewanella baltica OS223] gi|315267180|gb|ADT94033.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 360 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 106/317 (33%), Gaps = 12/317 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + V + + ++ L + L++ + G+ Sbjct: 54 WPVAQML--KVGINRTAGASLVIVLFLGIVVLLTFGLIPSVWRQGVSLIADLPSMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L + + + + L T + I + + L Sbjct: 112 LTIQTLIN-------QYPQFINPEQLDLMVGELKKLLDTQHVLDIAKQLIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + +K+ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLISGSKRFFP-ANRQLARKVWFEMHQQIFNYIRGKVIEIVV 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ + + G+ V LGV+T + +IP GA + +++ + + + Sbjct: 224 VGVATYILFAVMGLRYSVLLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLM 283 Query: 284 WGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + +D L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNLLVPILFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KESIMAIKENKEKISSN 359 E + ++ Sbjct: 344 NAWPKTEVETLHGLDAS 360 >gi|332036909|gb|EGI73369.1| integral membrane transport protein [Pseudoalteromonas haloplanktis ANT/505] Length = 345 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 111/331 (33%), Gaps = 22/331 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + + ++L + P + A I P+ F K S Sbjct: 1 MASLTGVNKSLIVFASLVVVLAGIKAASVIIIPFILAAFIAIICNPLIKFFARYKIPKS- 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA + V+ + + + L + + ++ + Sbjct: 60 ----IAVMLVVLIIVGLGVSLGGLVGQSINDFSQQLPEYKTQ--------------LKEE 101 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +W L+ ++ I + + + A+ ++ +I+ + F + Sbjct: 102 FVWLVDLASQYNILINKDQLINMFDPGKMVDVATNMLTGLGGVMANMFLIILTVVFMLFE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S+++ E P K + I S T++++G G++ W+ V Sbjct: 162 GPMLSKKIHMALED--PDSKMKQIDRFLESINSYLAIKTLVSLGTGIIAAFYLWILDVDY 219 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V GV+ + IP G+ I+ + LI A + ++ + P Sbjct: 220 FVLWGVLAFMFNYIPNIGSIIAAVPAVLLALITQGPLVAGLVAAGYLTINTVMGNIVEPK 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +G + L L F L+ +G +G+ + Sbjct: 280 FLGKGLGLSTLVVFLSLIFWGWLLGTVGMLL 310 >gi|159029414|emb|CAO90790.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 365 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 124/335 (37%), Gaps = 13/335 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ +L+ + ++A ++ F + + ++ + + I + + + V Sbjct: 27 LLFQLFSYLEPLVSIFVTASLLAFVLD-VPIKLLQRRGVNRSGSIAIVFLIALLILSVLG 85 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L L + ++ L++ + + G + L + + ++ Sbjct: 86 LILIPQIVEQLSSLINSLPQWIESGTEQIQNLEKWDKTQKYAIYIEQSITQLSERL---- 141 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 TN + + F + ++ L+I+F+++ F G I + + S Sbjct: 142 ----TNVLQTLSTQLLSFVLGTINSILNILFVLVLTVFLVLYGEQIWEGILSWIP---AP 194 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + K+ I+ + + F G TI+A L + + V + GV + +IP + Sbjct: 195 WNLKLRTIIRQTFETYFAGQTILAGILSLAQIFVFVILKVDYALLFGVAIGLTTLIPFAS 254 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + +S L+ + + + + I I D + P L+GG I L + L Sbjct: 255 AFTIIGISTLLMFQ-DFWLGLKVLTLTIIVGQINDNVIAPRLMGGMIGLNPVWIILSLFI 313 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + G+LGL I + +++ +E + Sbjct: 314 GGKVAGILGLLIAVPIASVLKSTIDIIRSQQREKE 348 >gi|116872345|ref|YP_849126.1| hypothetical protein lwe0927 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741223|emb|CAK20345.1| putative membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 348 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 118/355 (33%), Gaps = 25/355 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I + LY L+ +L I F + + + + + Sbjct: 5 ERLKENNTARRVLVFLLIGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYTLVAIFLYVAIVHFLPILINQISQLVDSLVKIYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G++FI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------TGVNFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVATFGVVLEAQLMIALVNTIITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVIYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ LP TF L+ G+ GL +G + + I + ++ + Sbjct: 284 KLMSSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILEVRNSEDRKKR 338 >gi|110638692|ref|YP_678901.1| hypothetical protein CHU_2298 [Cytophaga hutchinsonii ATCC 33406] gi|110281373|gb|ABG59559.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 371 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 60/348 (17%), Positives = 122/348 (35%), Gaps = 22/348 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L I ++ +I S + + PV A + +P+ FI +K + T ++ Sbjct: 9 LLQNLLITVILVTTMIFASTWLI-----PVSWAFLFACLLYPV-CMFIERKGLNRTLTSM 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T+ + + FL +L + + V+ + GI + Sbjct: 63 LVTLLFCVIMFFIMYFLIMQALL-IIQTNDNVLHKIKEGIES--------VILHIQSKTG 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 HP SLK T + NG+ I S G L L+ +F LFF + Sbjct: 114 LEFYHPHSLKESLSTIFQ-NGMSVISTQLSSVGTNVLTIALTPVF----LFFILNLRGLV 168 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + +++ G I+ ++ L GV S + Sbjct: 169 KAFYIKNYKGNDLESIQTFITKSLTSMKNYLWGTMILTAVTAVMTYIILMLFGVKSAIFF 228 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG 302 V AI+ +IP G I++ A+ ++ + + ++ + LRP LVG Sbjct: 229 SVFLAILNIIPYLGNLIAYIAILSFVWVTKESVSILIYITICLYFSNMIQENILRPKLVG 288 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +++ ++ G G+ G+ + + + + + + K Sbjct: 289 DKMEINAFLVLSAVMLGAIIWGVSGMVLFVPFLGIAKALVESNPEWNK 336 >gi|254390361|ref|ZP_05005578.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294813840|ref|ZP_06772483.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326442258|ref|ZP_08216992.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|197704065|gb|EDY49877.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294326439|gb|EFG08082.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 367 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 131/353 (37%), Gaps = 31/353 (8%) Query: 1 MRETMLNP-QGIMRWMIMFIIL-----VSLYFLKGF---FAPVLSALIIGFTSWPIYSSF 51 M + P + + W + ++L V+L+ ++ F PVL AL+ P Y Sbjct: 1 MHTLLPEPVRRLAAWCAVILLLAGVGAVALWLVQTFRIAVTPVLLALLGTALLGPFYRRL 60 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + S++ A + +V+C+ + + + ++++ + A Sbjct: 61 -RAMKVSASLAAGLTCAAVVCVVGGAMYVVVKALIDNGPQILASLRDA------------ 107 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 M +E + + L + ++ L G S + + + + Sbjct: 108 ----AMGITEHFGAAGTSLADLAVNAKELLAKFGGTAASGVISGL-SVVGQGIATAVLAL 162 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + +FFF RD S+ S+ +++ R + + G T IA+ + L++ Sbjct: 163 LLIFFFLRDSDRASKLAHSVAPGHSGQMVEEMGRRAFEAVEGFMRGTTFIALIDALLITV 222 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI--EL 289 + VP V LG + + A IP AV++ L+ + L+ G + Sbjct: 223 GLLVLRVPGAVGLGALVFVGAYIPYLGAFISGAVAV-LVALADRGWVIALWALGVVLAVQ 281 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + L+P + +++ + G G+LG+ + PV+ A VI Sbjct: 282 VLEGHVLQPMIQSRTVQMHPAVVMLAITAGAGVAGILGMLLAVPVVAAAFGVI 334 >gi|158336614|ref|YP_001517788.1| hypothetical protein AM1_3482 [Acaryochloris marina MBIC11017] gi|158306855|gb|ABW28472.1| conserved hypothetical membrane protein [Acaryochloris marina MBIC11017] Length = 364 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 80/215 (37%), Gaps = 1/215 (0%) Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L +++ +I + D + Q L +L + Sbjct: 144 SSQKLILQSVDITKGLLGGVFNLLLALILSAYMLSDSQRLLQGLVALFPQPWEQRLADQV 203 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA-LGVITAIMAMIPGGAPISFT 263 V + + + G ++++ G + L G+ LG I + +IP P+ Sbjct: 204 HPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEVALGLGAIAGLTNLIPFFGPVLGA 263 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + +FL + + L P +V + +P L ++GG + + Sbjct: 264 IPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLVVSPSVNVPPLYQLLAVLGGTQVL 323 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G I P +A V+ + + K + E+ + Sbjct: 324 GIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQ 358 >gi|314968424|gb|EFT12522.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] Length = 404 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKK 55 E + G+ + I+ + + + + F AP+ L + T++PI++ + K Sbjct: 49 EVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHK 108 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + ++ + + + +L S IP Sbjct: 109 CPR-WISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSY-----------------IPQ 150 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 151 MEKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMI 210 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 211 FMVMDTPQMHDRLRMAGSRKPDVVLA--LESFASGIRKYWLVTTVFGLIVALFDWAALLI 268 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP G I ++ L K A + + ++ F++ Sbjct: 269 IGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQS 328 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 329 IIQPKFAGDAVGLTPTMSFVSLLLWGWAFGALGTLI 364 >gi|119716027|ref|YP_922992.1| hypothetical protein Noca_1793 [Nocardioides sp. JS614] gi|119536688|gb|ABL81305.1| protein of unknown function UPF0118 [Nocardioides sp. JS614] Length = 387 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 85/257 (33%), Gaps = 5/257 (1%) Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 P WL + + + + + + E N + + G Sbjct: 135 QVQSITDNAPDWLDSL----QQNRRIQELDAEYDVIDKVKEYVSDGNYVSTLFGGVLGIG 190 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + L + +I+ +F + L L + V + + G Sbjct: 191 LAVLSALANAFIVIVLTLYFLASLDKTKKALYQLAPASRRERVALLGDRVLRGVGGYVSG 250 Query: 218 MTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 I+A+ G+ ++ G+ VAL + A++ +IP V + + Sbjct: 251 AFIVAMCAGISSLVFLFIVGLGQYAVALAFVVALLDVIPMIGATIGAVVVTAIGFAEDPR 310 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 ++ I + + + P ++ + +P T + G +G++G + A Sbjct: 311 IGIACIVFYVIYQQVENYVIYPRVMSRSVDVPGAVTVIAALVGAALLGVVGALLAIPTAA 370 Query: 337 LIAVIWKESIMAIKENK 353 I ++ +E ++ ++ + Sbjct: 371 AILMLTREVVVRRQDAR 387 >gi|291004927|ref|ZP_06562900.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 407 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 18/312 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW----PIYSSFISKKEESSTFLAVIATV 68 R +++ + ++ + A V ++I P + K + A++ V Sbjct: 36 RVLVVAAAVGLAGYVLTYLAAVAMPVVIALLLAALLGPFSNWLTGKGAPRALATALVVCV 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + V L + + ++ L ++V + G WL P + +L Sbjct: 96 GLISVTGV-LALVVGTVVADLPRLQAQVSNTLESG---EAWLRLGPLRLDQRQLDELVND 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L+ + + A G + L ++ L FF DG I L Sbjct: 152 ATATLQTHQGGIISG-----VLSTAVTSGEVLGGALL----VLFTLIFFLYDGDRIWNFL 202 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + +A + + +G + L GVP AL + Sbjct: 203 LRGFPLGSRDRVDLAGRSGFDALTGYVRATAAVACMDAIGVGVSAALIGVPLAPALAALV 262 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + +++ + L+ + A + + + L+P L+G L Sbjct: 263 FLGAFVPYLGILITGTLAVLVCLVTVGFWPAVLMAAIVIVVTQLEGHVLQPLLLGRASHL 322 Query: 308 PFLPTFFGLVGG 319 L + G Sbjct: 323 HPLAVVLSISVG 334 >gi|319956009|ref|YP_004167272.1| hypothetical protein Nitsa_0251 [Nitratifractor salsuginis DSM 16511] gi|319418413|gb|ADV45523.1| protein of unknown function UPF0118 [Nitratifractor salsuginis DSM 16511] Length = 342 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 118/360 (32%), Gaps = 28/360 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + F ++ A+++ + + + Sbjct: 1 MDRRTLFVLILFSIALWGAYSIYAPFLLSMVVAVLLAMATSNLTRYLTRTLRSRK-IATL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L + P++++ G+ + L + + + + W Sbjct: 60 VMVLLLFLLILAPIIYIATTGVEYLTHLDQQTIREIFAKA------RSLTENIPYVNHWA 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + I + ++ G L + + +I + Sbjct: 114 EEYLQVDKVIPYLKG---------ISLYITKMGSKGLGFVKDTVMVIAFYAAAVYNQDRF 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L +L +++ + + + + A+ EG + G G + Sbjct: 165 IATLVALIP-APQRESREMVAEIASTMEVVIYSIIVTAVFEGFLFGIFVSYFGFDG-LLF 222 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPF--- 299 G I +++P G + + +S+Y + A + ++ + + I+ D ++P Sbjct: 223 GAIYGFASLVPVVGGALVWVPLSLYAWSELGPQPALAIAIYSVVMISIIADTFIKPIIIK 282 Query: 300 -----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ I++ L FF ++ G+ T G G+ +GP + + + ++ +E Sbjct: 283 MIKEQLLHVQIRINELVIFFSIIAGMSTYGFWGMILGPAITTFLFAATRIYLVYSSALEE 342 >gi|254410220|ref|ZP_05024000.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196183256|gb|EDX78240.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 389 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 121/340 (35%), Gaps = 21/340 (6%) Query: 8 PQGIMRWMIMFII----LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + ++ W+++ + L +L ++ + +L+A +I F T A Sbjct: 9 QKVLITWLLVLVTGWVTLSALSYVGEIISILLTASLIAFLLNYAVRVLRPFLP--RTVAA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + L L + ++LV++ P L + + W Sbjct: 67 ILVYLVAAVFVVFIALTLAPPVFNQGRQLVTRF----------PELLEQGQQQLVDFQAW 116 Query: 124 TKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + P ++IL L + I + + + I +++ F+ DG Sbjct: 117 SVEHNLPFDVRILGSQMLARIQAKAEAIASTGLGLVVGTFSWFIDFILVLVLSFYMLIDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + S+ + +++ + + ++ G ++ + L + L VP Sbjct: 177 ERLWRGITSI---VSAKIRYGLTQALRRNLQRFVSGQLLLGLFMATTLTLGFRLLQVPFF 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + V M +IP A + ++ + + A + I D + P ++ Sbjct: 234 LLFAVFIGFMEIIPFVGATLGIATVVIVVAFIDWWLALEVLGVSVALQQIKDNLIAPRIM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G L + L+ G + G+LG+ + + ++ + Sbjct: 294 GNLTGLSPVIILTSLLLGAKIGGILGVILAIPVTGVVKSL 333 >gi|296328008|ref|ZP_06870543.1| permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154964|gb|EFG95746.1| permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 363 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 120/331 (36%), Gaps = 8/331 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V ++ +FI+ L + + Sbjct: 37 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIVFIIVIFIILSLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ I +I + ++T ++ + + TN Sbjct: 97 SIKTLNDIYPTISEKVIITG---KNIANYLAKKNIYTINMDEIDNYFTNFVSNNTTNITK 153 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 I + + ++ + F D + + L+++ + +F Y K Sbjct: 154 LISSILGSLIDWTIGFT-NLFLAFVLAFLILLDKKHLIKTLENMIKIIFGVKNTPYIMKK 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + G I++ GL + + G P ++ I MIP I Sbjct: 213 LSLSKDIFLGYVSGKIIVSTIVGLCVYIVLLITGTPYAALSAILLGIGNMIPYVGSIIGG 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ +L++ L + I + + P ++G + L ++ Sbjct: 273 IIAFFLILLVAPIKTIILLVAITISQLVDGFIVGPKIIGNKVGLNTFWIIVSMIIFGNLF 332 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+F+G +M+++ + + + + ++ E Sbjct: 333 GIVGMFLGAPIMSILKLFYVDLLKKAEQGGE 363 >gi|325181210|emb|CCA15624.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 790 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 76/202 (37%), Gaps = 10/202 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK---KISRIVPKVIRSTFL 216 F+ + F I +LF+ + ++ E L P + ++ + KVI F Sbjct: 358 FVSLGIRAFFFISSLFYLLC---TKWDPIERFVEDLLPIQNEKRPQVVHSIRKVIEGVFF 414 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNI 275 ++ LV ++ + +T ++++P P + ++ + + + Sbjct: 415 VPLKMSSLHALVTLISFSIVRADFVYLATTLTFFISIVPIIPPYLVCVPWALAIGVTSSF 474 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A LF I I+D L + L + +V GV G G+ GP+ + Sbjct: 475 IKALILFCVQYIAFTILDDMLY---EKSIVALNSYVSALSVVFGVYVFGFEGVIFGPLSV 531 Query: 336 ALIAVIWKESIMAIKENKEKIS 357 + ++ S I+ ++ ++ Sbjct: 532 CGVYFAYEVSNHGIQAAQDDVT 553 >gi|119899427|ref|YP_934640.1| hypothetical protein azo3137 [Azoarcus sp. BH72] gi|119671840|emb|CAL95754.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 372 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 114/325 (35%), Gaps = 12/325 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + L AP A + + P + + ++ AV+ ++ + L +V L + Sbjct: 25 FWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRP--AAVLLVITGLALILVALTLIL- 81 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + L + V Q + + + L + + T Sbjct: 82 -----VPMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRLQLDAGQARKWLAQNADT 136 Query: 144 NG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I + G+ + ++ + + +F+ +D + L + Sbjct: 137 AQDVIPILLGHIKTGGLALIALVANLFLVPVVMFYLLQDWPRLLAALQRSVPRPWLERTM 196 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 +I R + V+ G + + + WLAG+ + +GVIT ++ IP G Sbjct: 197 RIIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVGVITGLLVFIPYVGFGG 256 Query: 261 SFTAVSIYLLIKGNIFNA-TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L++G+ ++ + + + I L P+LVG I L L F L+ Sbjct: 257 GLVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGERIGLHPLAVIFALMAF 316 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 + G +G+ + + A + V +E Sbjct: 317 GQLFGFVGVLVALPVSAALLVALRE 341 >gi|170749965|ref|YP_001756225.1| hypothetical protein Mrad2831_3566 [Methylobacterium radiotolerans JCM 2831] gi|170656487|gb|ACB25542.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 657 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 106/363 (29%), Gaps = 25/363 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LY + PV A+++ F P + Sbjct: 11 LRQGLPIFVALASILLVVATMAALYLAREILVPVTLAILLSFVLVP-----AVRVLRRLR 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-----------------HG 103 A + V+ + L + E +L S + Q Sbjct: 66 VPRAPAVLLVVVIVFGALFGIGSLIASEASQLASDLPRYTQVMRTKIKDLRGATAGTGTL 125 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + D+ + P S L + + G I Sbjct: 126 SRIVDMVQDL-SATLQPPPAAEVRGEPGSRTHPLTVELTPARASVVDTLQTFAGPILHPL 184 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + + +I +F + ++ + G + FL + I Sbjct: 185 ATTGLILIFTIFILLQREDLRNRAIRLAGGSGDLRRTTAAIDDATSRLSRFFLAQLALNI 244 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 GLV+G W+ GVPS GV+ AI+ +P + + L + + + Sbjct: 245 AFGLVIGLGLWVIGVPSPTLFGVLAAILRFVPYIGAAISALLPLILAAAVDPGWSMVIAT 304 Query: 284 WGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I + P L G L + G +GL + L + V+ Sbjct: 305 AALFLVVEPICGHVVEPLLYGHSTGLSPVAVILAATIWTFLWGPIGLVLATPLTVCLVVL 364 Query: 342 WKE 344 + Sbjct: 365 GRH 367 >gi|254361725|ref|ZP_04977861.1| hypothetical membrane protein [Mannheimia haemolytica PHL213] gi|261492038|ref|ZP_05988613.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495015|ref|ZP_05991483.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093251|gb|EDN74257.1| hypothetical membrane protein [Mannheimia haemolytica PHL213] gi|261309331|gb|EEY10566.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312321|gb|EEY13449.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 358 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 116/345 (33%), Gaps = 13/345 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R+ +PQ ++ + I+ I +YF P+L AL+ + WPI SK + T Sbjct: 10 RKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLVALVFAYLLEWPI-RFLSSKLKLPRT 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + L + L + + + + WL +P Sbjct: 69 LSVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQDLPSMFNL---LNAWLQALPEHYPEL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S + K + ++ I S G+ + + ++ FF +D Sbjct: 126 VDYATLDSIVNTAKSNILSMGESLLTLSINSIISLVGLGIYTFLVPLMV-----FFLLKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + ++ + + I + G + + G+V + + Sbjct: 181 KIVLMRSFSKVLPQ-NRRLATRVWFEMQQQIANYIRGKFLEILIVGVVTYIIFLFFDLRY 239 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRP 298 + L V I ++P GA + V + L + + + I ++D L P Sbjct: 240 PLLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLSPDFYYLMLAFIISQLLDGNLLVP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 FL + L L ++ G G+F L L+ + + Sbjct: 300 FLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVLQ 344 >gi|149177528|ref|ZP_01856131.1| predicted permease [Planctomyces maris DSM 8797] gi|148843678|gb|EDL58038.1| predicted permease [Planctomyces maris DSM 8797] Length = 400 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 118/342 (34%), Gaps = 41/342 (11%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++ +LYF + F P+ A+++ F P+ + A I +S+ + Sbjct: 64 ILATLGVVHALYFARAIFIPIALAIVLFFLLAPLVRFLTRVCPIPESLSAAIVVLSLTFM 123 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + FL PV WLS P +E + + P Sbjct: 124 IGLASYFLAS---------------------PVSDWLSSAPATFRKAEQKLRFIIDPVDK 162 Query: 134 KILSETFLKTNGIDF-----------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + P S +++ + ++ ++ G Sbjct: 163 IDQASSQVSDIAGGKEKDDVVKVSIQQPPVTSYLLSSTVNFLAGVTITVVLVYLLLAMGH 222 Query: 183 SISQQLDSLGEHLFPAYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L + R V I + +T I IG G+++G+ WL G+P Sbjct: 223 RTLNSVVELLPTLDDKRGLVTMIRNVENGISRYLVTITAINIGLGIIIGTVMWLLGLPDP 282 Query: 242 VALGVITAIMAMIPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + LG++ A + IP GA ++F +YL +++ + + Sbjct: 283 ILLGIMAATLNFIPFVGAFIGAAVTFLIGIVYLNTPAEAMLGPLMYI---VINTLEGNVF 339 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 P ++G +KL F ++ G+ G+ + L+ ++ Sbjct: 340 TPMILGHSMKLNPALVFVCIIFWGWAWGVGGILLAVPLIGMV 381 >gi|323489867|ref|ZP_08095091.1| hypothetical protein GPDM_10965 [Planococcus donghaensis MPA1U2] gi|323396502|gb|EGA89324.1| hypothetical protein GPDM_10965 [Planococcus donghaensis MPA1U2] Length = 363 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 114/346 (32%), Gaps = 8/346 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSV 70 +++ I L L + P+ ++I P+ + + + Sbjct: 14 ILLVAITLFFLGKIDYVLEPIQ--IVIATIFAPVLLGGLFYYLLRPIVNWLARFVPKIVG 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + +++K V + + P + + ++ Sbjct: 72 IGIIFTIIALTASLLLYFFGPVITKQVDSLVNLAPETVEEVTEESNSFIANFQFGGVTGS 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + N + + + ++ + +I + LFF +D L Sbjct: 132 EIRMWTLDYV--ENLSEGLLNNVMDILTMLMNVVVVLIVVPFVLFFLLKDDDKFIPHLTK 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 KKI + V + + +G +A G+++ Y + G+ ++L + Sbjct: 190 YLPEEHKMEGKKILKDVDQTLSDFIVGQAFVAGVVGVLMYIGYLIIGLDYALSLAIFAMF 249 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P G + L G+++ A + L + + + P ++G + + Sbjct: 250 LIIVPFLGPLLGIVPALFVALTSGDMWMAVKVILVLLVVQQLEGNLVTPNIMGNRLNIHP 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L L+ G +G+ I A++ + + + K++ Sbjct: 310 LTIILLLMIAGALYGFIGILIAIPTYAVLKTLVHNFRLFNRLRKKR 355 >gi|304437787|ref|ZP_07397737.1| possible permease [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369235|gb|EFM22910.1| possible permease [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 342 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 124/352 (35%), Gaps = 22/352 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ +L S +F + F V +L++ P+ + ++ A Sbjct: 9 SIILAIVFAALLSSFWFFQDFAFIVFLSLLLQILLQPVVDAMERRRIPRGIASA------ 62 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + LV VL+ + R+++++P L L Sbjct: 63 ------------GAILLFLLLVLVLLSVLSRSVVPSLQRFVTELP--SIGQGLQQMPLLT 108 Query: 130 PQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L+ E+FL + + R + F + + + + +I F+ +DG I + Sbjct: 109 EMDLQQEMESFLDKLRSVGAELLRASLSFLLAAVGKIMDFVIIIFVSFYLLKDGKMIKRW 168 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + + +R ++ I GL++ + L G+P ++ Sbjct: 169 LAGLFPYGSRGRVLSLFDRLLHALRIYVCSQLVMCIITGLIVFLYFVLMGLPYGSVFALL 228 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + I +P P + +A+ I + L+ I + P LVG + L Sbjct: 229 SGISEFVPVLGPTAASALGIIMTASAAHDLTVQTALFYLALTQINHNIVYPALVGKSLHL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+V G +G G+F+ M ++ ++ + K + Sbjct: 289 HPVAVILGVVFGGEILGAAGMFLAVPFMVIVKIVVTDIYHEQKTETPEGEEE 340 >gi|226324526|ref|ZP_03800044.1| hypothetical protein COPCOM_02310 [Coprococcus comes ATCC 27758] gi|225206974|gb|EEG89328.1| hypothetical protein COPCOM_02310 [Coprococcus comes ATCC 27758] Length = 460 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/380 (13%), Positives = 128/380 (33%), Gaps = 48/380 (12%) Query: 14 WMIMFIILVSLYFLK--------------GFFAPVLSALIIGFTSWPIY----SSFISKK 55 + ++ V YFL P+L ++I + PI I + Sbjct: 48 FFLVIAACVIFYFLLLRIEDISVGVSKVIDVLKPILYGMVIAYLLNPIVKQIDRWLIPQL 107 Query: 56 EESST-------------FLAVIATVSVMCLF---IVPLLF-----LFYYGMLEMKELVS 94 ++ + F A++ ++++ ++P L+ + ++ ++V+ Sbjct: 108 KKKMSQEKAKKVSRSVGVFAALVMLLALILALCNMLIPELYKSIRDMVQTLPGQISDMVT 167 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 K++ + P G+ A L K Q+ + + Sbjct: 168 KIISIQKDTS---------PAGVMARNLLEKGSDALQNWIKQDLLTKVNEVMSNLTVGII 218 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 F L++ + +I + LF + + ++ +++ ++ Sbjct: 219 NFVSEILNFLIGLIVSVYILFSKETFSAQSKKIVYAVFRTDHANMILHLTKKSNEIFGGF 278 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 +G I ++ G++ L +P + + VI + +IP P S L++ + Sbjct: 279 IIGKIIDSMIIGVLCFFGLTLLKMPYILLISVIVGVTNVIPFFGPYIGAIPSAVLILLND 338 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 ++ + + + P ++G L F ++ G G +G+ +G Sbjct: 339 PIKGLSFLIFILVLQQLDGNVIGPKILGNSTGLSAFWVVFSILLGGGLFGFVGMIMGVPT 398 Query: 335 MALIAVIWKESIMAIKENKE 354 A++ I I + E K+ Sbjct: 399 FAVVYYIITMLINHLLEKKK 418 >gi|92118409|ref|YP_578138.1| hypothetical protein Nham_2910 [Nitrobacter hamburgensis X14] gi|91801303|gb|ABE63678.1| protein of unknown function UPF0118 [Nitrobacter hamburgensis X14] Length = 660 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 114/360 (31%), Gaps = 27/360 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ +++ LY + F P+ A+++ F P+ + + ++ Sbjct: 19 DRALTSAIVAALVICGLYVGREIFVPIALAVLLSFVLAPLVDILERWHSPRAASVPLVVV 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH- 126 ++ + LF L L + + E + + Q I R L+ A+++ Sbjct: 79 LAFVALFA--LGSLIANEVRHLAEGLPRYQQTMQQKIQSLRALTATGPLDRAADILQNLG 136 Query: 127 ------LSHPQSLKILSETFLKTNGI------------DFIPRFASRFGMIFLDYCLSII 168 P S + KT G S L ++ Sbjct: 137 KEINVPQGQPPSPSAATSPPSKTPGEVEPIPVQVRPPPQSALENISALITPLLHPLATVG 196 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 +I+ + F + +L L + FL + G++ Sbjct: 197 VVIVFVVFILFQREDLRNRLIKLAGSNDLQSATAAIDDAAGRLSRLFLMQVALNTSFGVI 256 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + GVPS + G++ AIM +P F A L + + + LW Sbjct: 257 VAIGLLVIGVPSAILWGILAAIMRFVPYVG--VFIAAFFPLTLAVAVDPGWSMLLWSGAL 314 Query: 289 LFIVDKTL----RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + + P LVG L + G +GL + L + V+ + Sbjct: 315 ILLTELVIGQVFEPLLVGHSSGLSPVAVVASATFWTALWGPIGLVLATPLTICLVVLGRH 374 >gi|39936906|ref|NP_949182.1| membrane transporter [Rhodopseudomonas palustris CGA009] gi|39650763|emb|CAE29286.1| possible membrane transport protein [Rhodopseudomonas palustris CGA009] Length = 652 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 124/355 (34%), Gaps = 30/355 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ II+ +LY + F PV A+++ F + S + + +A I+TV Sbjct: 22 TILAVIIISALYVGREVFVPVALAILLSFVLARPVNFLQSLRVPRA--IAAISTVLFAFA 79 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS----DIPGGMWASELWTKHLSH 129 I L L + + + + + Q I R ++ + + +K L+ Sbjct: 80 VIFALGSLIATQLSRLADDLPQYQSTIQSKITSLRGVTGGSTTLERAEGMLQNLSKELNK 139 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIALFFFYRDG----- 181 P++ S + T+ + L S+I +I+ G Sbjct: 140 PKNAPAPSLSNPPTSSSRPVTPVPVEVLQPDPGTLANLRSLIAPLISP--LATTGIIVIF 197 Query: 182 --------FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + +L L + FL +I G G+++G+ Sbjct: 198 VIFILLQREDLRNRLIRLAGTRDLQRTTAALDDAASRLSRLFLNQLLINSGFGVLIGTGL 257 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 W+ GVPS G++ A++ +P I A + L + + + + +W AI F+++ Sbjct: 258 WIIGVPSPALWGILAAVLRFVPYIGSIISAAFPLTLAVAVDPGWS--MLVWTAILFFVIE 315 Query: 294 ----KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P + G L + G +GL + L + V+ + Sbjct: 316 PAIAHVVEPMVYGRSTGLSPVAVVISATFWTALWGPIGLVLATPLTVCLVVLGRH 370 >gi|310828588|ref|YP_003960945.1| sporulation integral membrane protein YtvI [Eubacterium limosum KIST612] gi|308740322|gb|ADO37982.1| sporulation integral membrane protein YtvI [Eubacterium limosum KIST612] Length = 363 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 126/344 (36%), Gaps = 9/344 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ET I+ +M I+ + + + + P+L+ IIGF + I Sbjct: 2 ETEKRRAFIIDFMYFAILALLCFAVLKYAMPLLAPFIIGFALAYLLKGPIRLLSGKLRLN 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV--LANQHGIPVPRWLSDIPGGMWAS 120 I+ + V+ +F + L ++ +++ L + + V L I G+ S Sbjct: 62 GKISAIVVVLVFYGTIGTLISLLGVKAFAASRELIFNLPQIYALHVEPVLMGIFDGVEQS 121 Query: 121 EL-----WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L L + + S + ++ S + ++ +II+ F Sbjct: 122 VLRMDPALVAALEEMFNRLVQSLGQMVSSLSMGAMGTVSDIASSLPGLFIKLLLLIISTF 181 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++ + + +I V + +I + L L Sbjct: 182 FIAIDYDRLTGFVMHQLNGKTRTVFVQIKEYVVGTLFVCIRSYALIMSITFVELVIGLTL 241 Query: 236 AGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GV + + + + A+ ++P G ++ ++GN L + + +V Sbjct: 242 IGVDNALIIAFVIAVFDILPVLGTGGIMIPWTVITALQGNY-PLALGLLLVYLVITVVRN 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + P +VG I L + T + G++ G++GLF P++++L+ Sbjct: 301 IIEPKIVGSQIGLHPVITLASMFVGLQLFGVVGLFGFPIVLSLL 344 >gi|255280313|ref|ZP_05344868.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] gi|255269404|gb|EET62609.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] Length = 348 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 120/345 (34%), Gaps = 6/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M I I + + + ++ P A ++ P K Sbjct: 1 MSMHKPYKDAIKLTGIAIAVFLGMKYILPVAIPFFIAWVLVRFLMPGAVFLEEKLHLKKV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I V + + L L + ++ L + + Q + + Sbjct: 61 LAGGILLVLLTGAAGIALYLLGSTLIRQVCNLAANFDIYMQKAENLLKVCCSAVEKNTGI 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ E L+T + + + + + M L++ ++ + ++ +D Sbjct: 121 HA-QAVENFIYDNMLVVEQRLQTYAVPDVLKNSISYLMSMLEWLGVVLIVFVSYMLILKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L G + +KI+ + + + +I + ++ + L G P Sbjct: 180 YEKLGEVLKKYGIY---ERTRKINAAMMSLGGAWLRAQLLIILTVTIICVAGLALLGYPY 236 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++ ++ +P G + + G + CL + + + + + L P Sbjct: 237 ALLLGIVIGLLDALPFIGTGTILVPWGVIQMFTGKFWLGVCLIVL-FLIINTLREFLEPK 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+G + + + + G+ G+ G+ +GP+ + LI I++E Sbjct: 296 LIGDRMGIYPIAMVAAVYVGICVYGVAGVVLGPISLMLIIEIFRE 340 >gi|157693317|ref|YP_001487779.1| sporulation integral membrane protein YtvI [Bacillus pumilus SAFR-032] gi|157682075|gb|ABV63219.1| sporulation integral membrane protein YtvI [Bacillus pumilus SAFR-032] Length = 372 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 116/344 (33%), Gaps = 12/344 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M I +V LY F P ALI+ P+ F+ VI + Sbjct: 11 RSLMMISIAVFAVVFLYQSFPFLYPFWIALIVSCLIHPVVCKIEEITGMPRGFVVVIVLL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTK 125 + L + L + L + I + +P + + Sbjct: 71 LFLVLAAGFITLLVAEIISGSAYLAKVLPGHLDQIIGIVERFFTDKILPLYHDVTAQFNT 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASR-------FGMIFLDYCLSIIFMIIALFFFY 178 + + + L I F S+ F + D +++F +A FF Sbjct: 131 LQAGQKESILGQIQALGDEAAAKIGTFLSKTLELIPAFLGLLPDAAATLLFSALATFFIT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D F++ + + + + + I + K I ++ ++ + V Sbjct: 191 KDWFTLKKYGSRIFPAKWMQHTRAILSEIKKAITGFMKAQLLLVAMTIGLVIIGLIILKV 250 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + + + ++P G+ F IY + GN+ A L + I + I + Sbjct: 251 EHALVIALCIGFVDLLPYIGSGTVFLPWIIYSAMTGNLSLAIGLGILY-IVVLIQRQISE 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P ++ I L L T L G++ G LGL IGP + + Sbjct: 310 PKVLSKSIGLNPLATLVALFVGLKWFGFLGLVIGPASLVVWQAF 353 >gi|330833351|ref|YP_004402176.1| putative permease [Streptococcus suis ST3] gi|329307574|gb|AEB81990.1| probable permease [Streptococcus suis ST3] Length = 376 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 122/340 (35%), Gaps = 7/340 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G + I F + E+ S +++++ + I L + + Sbjct: 35 LLGSMNSLFIGAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFALIVTGLVV 94 Query: 87 LEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--LKILSETFLKT 143 + + LV+ V L + +P+ ++ + + ++ L + + + L L L + Sbjct: 95 IVLPTLVTTVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQLKNLTLIS 154 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + I +++I + + P ++ Sbjct: 155 SLVTPILSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATLPEKAVRV 214 Query: 204 SRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +VI T + + A G ++ +Y L+G+P G++ +++ +P P Sbjct: 215 VNYIGEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLSFVPYIGP 274 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 S +S + N A I I + P +VG + LP L T + G Sbjct: 275 FSACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFTLAAALIG 334 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+ + A++ + +E + + + + ++ + Sbjct: 335 GNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQGELLAE 374 >gi|114777480|ref|ZP_01452477.1| hypothetical protein SPV1_14309 [Mariprofundus ferrooxydans PV-1] gi|114552262|gb|EAU54764.1| hypothetical protein SPV1_14309 [Mariprofundus ferrooxydans PV-1] Length = 370 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 121/354 (34%), Gaps = 14/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L ++ +++ + ++ +L A ++ +P S I + S T Sbjct: 7 MLSHPLLQASVIFSVLVTALALTASLFYPLLFTLLVATLLYAAMFPTTSYLIRR-GVSPT 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ ++ ++ L+ ++ +L ++ + + ++ Sbjct: 66 QAVVMVMTVIVTFVLLMGALLYPLIAAQLDQLSTRTGSIDVRLTRLLLQVNT-------- 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +T + L + + + F D S+ + + FF RD Sbjct: 118 --FTTGYLDISFNPAETAAQLVNSVTHSLDTMQATVTSYFDDVAFSLFLVPLITFFLLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S+ Q L + + I + + G+TI + L+ + +WLAG+ Sbjct: 176 FRSLRNQAMQLLPNRYFELGWMIYNATSSQLHAYLRGITIQMVCITLICTAGFWLAGIDF 235 Query: 241 HVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLR 297 LG++T ++ +IP G A V + LL + L L +VD + Sbjct: 236 APLLGILTGLLNLIPIFGIALAKIPPVLVVLLSDKPDLTSMILALAVVFAAQLVDTAYIL 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P ++ L + + G GL L+ VI+ E +++ Sbjct: 296 PRVIAKSANLHPVTVMLSVSLAGYYFGFTGLIATVPLLFSGKVIFSELFSGLRD 349 >gi|148271920|ref|YP_001221481.1| hypothetical protein CMM_0741 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829850|emb|CAN00774.1| conserved membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 385 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 114/336 (33%), Gaps = 16/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ I+ + LK PV+ ALI+ P+ + A IA + Sbjct: 21 QILAVLVVAIAIVYAAISLKLVVIPVIIALILACAVRPMVLWMERR-GLPDALAAAIALL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LF + + + + LV + + Sbjct: 80 TGLVLFGGAITAVVFGVQSQWPTLVKATSEGVDQLQSFIEEGGLPIDSSQIDSIRQSAVD 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + S + + A + ++ FFF +DG I Sbjct: 140 FLTSSQFGSGAIAGVSAAAEVVTGA--------------VLGLVVFFFFVKDGPQIWSFF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ KV+ G +A+ + + +G+ ++ GVP + L ++ Sbjct: 186 IRPFRGRGRKRAVRVGHEGSKVLGGYIRGTATVALVDTVFIGAGLFILGVPLALPLSLVV 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P GA ++ ++ L+ ++ A + + + L+P ++G +KL Sbjct: 246 FIGAFVPIVGATVAGILAALVALVTNDLTTAIIVIIIVVAVNQLEGNLLQPVVLGNALKL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L G G++G + L A+ WK Sbjct: 306 HGLVVLLALTAGTILGGIIGAILSVPLTAVAWTAWK 341 >gi|239623509|ref|ZP_04666540.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521540|gb|EEQ61406.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 379 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 102/325 (31%), Gaps = 14/325 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY-- 84 + FF P + II + P+ + +++ V+ + L I L + Sbjct: 36 ILKFFMPFVIGWIIAMIANPLVRLLERRMRLVRKHSSIVIVVAALALVIGLLYLIISRSF 95 Query: 85 -----GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + ++ L + + + + + L + E Sbjct: 96 ALLYGFIKDLPALYAGIEGDVSRSMEQIDHVFQFLPDSIQQTWSEIGNNLGTYLGKVVEG 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 A + ++ I++ +FF D +I + S Y Sbjct: 156 IASPT-----VEAAGSVARSIPAILVYMVVTILSAYFFIVDRDNILAFVKSHTPAWSQRY 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + V ++I F+ I L+L + + GV + A + +P G Sbjct: 211 TSYLKGEVRRLIGGYFMAQFKIMAVVWLILTVGFLVLGVGYAPLWAFLIAFLDFLPVFGT 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + L+ G A L L + + + ++P LVG + L L T L Sbjct: 271 GTALIPWGLIKLLGGEYAFAAGLLLIYVLTQ-VTRQLVQPKLVGDSMGLNPLLTLLLLYL 329 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 G + G+ G+ + + ++ Sbjct: 330 GFKVNGIAGMILAVPIGLFFVSLYD 354 >gi|28210756|ref|NP_781700.1| permease [Clostridium tetani E88] gi|28203194|gb|AAO35637.1| permease [Clostridium tetani E88] Length = 337 Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 121/344 (35%), Gaps = 13/344 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ I+ S + ++ + +I + P+ + K Sbjct: 1 MDKIYKKIILYVLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLV-KVGIKDG 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I S++ L ++ ++FL E ++ + + + Sbjct: 60 IASFITIFSLIILVVIFVMFLIPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGI 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 EL S +T + ++ + S + + I + I ++F D Sbjct: 120 ELLHHIYS-------KVDTIINKTFMNIFDKTVS-----LGENIMDIFIIPIISYYFLVD 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I+ +L L ++I + + K++ + I++ G V L V Sbjct: 168 WKKINSRLIVLFPMKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDF 227 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L VI A +IP PI + +I + + + A + + I + P Sbjct: 228 PILLSVINAFFNIIPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKF 287 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G I + L L+ G G+LG+ + L +I VI+++ Sbjct: 288 IGDNISMHPLLIIILLIIGGELWGVLGMILAIPLGVIIKVIYED 331 >gi|312862745|ref|ZP_07722985.1| putative lipoprotein [Streptococcus vestibularis F0396] gi|322516754|ref|ZP_08069662.1| permease [Streptococcus vestibularis ATCC 49124] gi|311101605|gb|EFQ59808.1| putative lipoprotein [Streptococcus vestibularis F0396] gi|322124713|gb|EFX96160.1| permease [Streptococcus vestibularis ATCC 49124] Length = 378 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 107/294 (36%), Gaps = 10/294 (3%) Query: 61 FLAVIATVSVMCLFIVP-LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F + + + ++P L+ + + + ++ ++ + + + D+ G Sbjct: 85 FATIGLVFTWVVFTVLPDLIDSINTLISQDRSAINNLINWLLKNKSLQKVIQDLGGVTQV 144 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 EL + + + G+ + ++ +S++F L + Sbjct: 145 RELINSYSAQLLQQIM--------TGLTNFLTSLTSLPSTLINLFISVVFSCYVLAGKEK 196 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +++ +D + + I+ R+ F+ +I A G + + P Sbjct: 197 LGNQVNRLVDVYLGRY-GKTFHYVVGILNNRFRNFFVYQSIEACILGTLCYIGMRIFNFP 255 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ AMIP + L++ ++ A + I + P+ Sbjct: 256 YAATISILIGFSAMIPVVGAYIGVTIGTILIMTHSVTLALLFVAYVVILQQFEGNLIYPY 315 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +VGG LP + F + G G+LG+ + + A + I K++++ +E K Sbjct: 316 VVGGSTGLPGIWVIFAITIGSALAGILGMLVSVPVAATLYQIVKDNVVTREEAK 369 >gi|15805286|ref|NP_293976.1| hypothetical protein DR_0252 [Deinococcus radiodurans R1] gi|6457925|gb|AAF09838.1|AE001886_4 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 373 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 117/330 (35%), Gaps = 21/330 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF--LFYYGMLEMKE 91 A +I + + P+ + + + + + L + L + + + Sbjct: 46 FAVAFLIAYLANPLLGWLERGRVRRGLGVFFVLLLFLGLLALAGALVVTVGGQFVQLFQN 105 Query: 92 LVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSH-----PQSLKILSETFLKTN 144 L +++ N+ +WLS IPG A T+ L ++ + + L + Sbjct: 106 LPAQIDNLNRILDGAVQWLSGRGIPGLADAQTRMTEALRDWIANIGNNIVPILQNALSST 165 Query: 145 GIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G F + G + L LS+ M+ D ++ L + + Sbjct: 166 GTLFNRLISIGGVIGQVLLILLLSVYLML--------DYARVNASLLRAFPRPWQPKVLE 217 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS- 261 S ++ + G +IA G+ + + G+PS A+G + ++P PI Sbjct: 218 FSDLIGTAVGGYVRGQLLIAAFIGIFVWLGLTIVGIPSAAAIGFLAGAFNIVPYLGPIIG 277 Query: 262 -FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ + L + F + + + I L P+++ L + ++ GV Sbjct: 278 ATPALLLALTLPNAGFKMILVVVVFVLANQIEGNFLSPYILSKTTDLHPVTVLLAILVGV 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 MG G + L+AL ++ ++ + Sbjct: 338 ALMGFAGALLAVPLVALGKLMLEKYYYPSR 367 >gi|291520930|emb|CBK79223.1| Predicted permease [Coprococcus catus GD/7] Length = 394 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 46/363 (12%), Positives = 114/363 (31%), Gaps = 27/363 (7%) Query: 11 IMRWMIMFIILVSLYF---------------LKGFFAPVLSALIIGFTSWPI---YSSFI 52 I+R ++ I+ F + A +I P+ ++ Sbjct: 32 IIRAFLLLIVFAWALVNLDAVLRFLGKVLELFNPFLIGGVIAFLINVVLRPLECCWNRVC 91 Query: 53 SKKEES--STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 K +TV V+ + + + + E + + + + + RW Sbjct: 92 RKAPAKLTRPVCLTASTVLVLGILFAVVFMMIPSLRESVDEFIQNIPVYVEG---IGRWG 148 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + + L I T L ++ I L + ++ Sbjct: 149 DGVAQFAAKYNIVLPEYAIDSDLLIEKVTALISDEESGILTVTWGAAASVLSVLVEVLLG 208 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEG 226 ++ + ++ L + P + I+ + + + G A+ G Sbjct: 209 LVFALYLLAKKEVVAAHLKKFVVTVLPQKKAQCLLSIASLTNQTFTNFVSGQLTEAVIIG 268 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ + G+P A+ A+ A++P + +L++ A L+ Sbjct: 269 VLCFFGMLILGLPYAGAISAFVAVTALVPIFGAWIGGGLGAFLILLAEPGKALWFILFLL 328 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + + P +VG + LP + + G G+LG+ + A++ ++ E + Sbjct: 329 VLQQVEGNLIYPKVVGKSVGLPGMLVLMAVTIGGEAFGILGMLFSVPVCAVLFSLYLEFM 388 Query: 347 MAI 349 Sbjct: 389 KKA 391 >gi|256006040|ref|ZP_05430976.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] gi|255989985|gb|EEU00131.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] Length = 309 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 91/267 (34%), Gaps = 11/267 (4%) Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ +S + + + LS++ G LS L + L ++ Sbjct: 41 LIKSIQVFLSNMGAYIDNFRDLTNELSELLGLERID------LSSLDKLILEYTNRLGSS 94 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA----YW 200 + +P+ S L + +++ ++ + + Q + P Sbjct: 95 LTELMPKIIS-ITTGVLSFFATLVITVVFSIYILAGKERLIGQCKKVFSTYLPECLYKKG 153 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + R+V V G A G + + + + V+ A+ A++P Sbjct: 154 AYVYRVVVDVFNKYIYGQLAEAFILGSLCFIGMVIFRFEYALLISVLIAVTALVPYFGAY 213 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + LL+ + A ++ + + + + P +VG + LP + + G Sbjct: 214 IGGFCAFMLLLMISPTKAIWFLVYLVVLQQLENNLIYPRVVGSSLGLPGIWVVLAAIVGA 273 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIM 347 G +G+ G + ++ + + ++ Sbjct: 274 GVGGPIGVLTGVPIATVLFTLLRNDVL 300 >gi|313763507|gb|EFS34871.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313773444|gb|EFS39410.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313793896|gb|EFS41920.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313801287|gb|EFS42538.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313808034|gb|EFS46515.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313811497|gb|EFS49211.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313813443|gb|EFS51157.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313816689|gb|EFS54403.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313819600|gb|EFS57314.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313822075|gb|EFS59789.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313823691|gb|EFS61405.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313826015|gb|EFS63729.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313829484|gb|EFS67198.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313831238|gb|EFS68952.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313834850|gb|EFS72564.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|313839990|gb|EFS77704.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314914806|gb|EFS78637.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314919378|gb|EFS83209.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920714|gb|EFS84545.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314924725|gb|EFS88556.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314930594|gb|EFS94425.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954451|gb|EFS98857.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314957522|gb|EFT01625.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314961996|gb|EFT06097.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314963749|gb|EFT07849.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314974114|gb|EFT18210.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976596|gb|EFT20691.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314978949|gb|EFT23043.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314986608|gb|EFT30700.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314990965|gb|EFT35056.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315079597|gb|EFT51590.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315081174|gb|EFT53150.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] gi|315083636|gb|EFT55612.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315087056|gb|EFT59032.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089231|gb|EFT61207.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315095253|gb|EFT67229.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|315099135|gb|EFT71111.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100382|gb|EFT72358.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315106803|gb|EFT78779.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|315108932|gb|EFT80908.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327328484|gb|EGE70246.1| hypothetical protein HMPREF9338_01501 [Propionibacterium acnes HL096PA2] gi|327329650|gb|EGE71406.1| hypothetical protein HMPREF9337_01714 [Propionibacterium acnes HL096PA3] gi|327334165|gb|EGE75879.1| hypothetical protein HMPREF9344_01066 [Propionibacterium acnes HL097PA1] gi|327444271|gb|EGE90925.1| hypothetical protein HMPREF9571_02402 [Propionibacterium acnes HL043PA2] gi|327444849|gb|EGE91503.1| hypothetical protein HMPREF9570_01911 [Propionibacterium acnes HL043PA1] gi|327446335|gb|EGE92989.1| hypothetical protein HMPREF9568_00917 [Propionibacterium acnes HL013PA2] gi|327452077|gb|EGE98731.1| hypothetical protein HMPREF9584_02283 [Propionibacterium acnes HL092PA1] gi|327454886|gb|EGF01541.1| hypothetical protein HMPREF9581_01074 [Propionibacterium acnes HL087PA3] gi|327457829|gb|EGF04484.1| hypothetical protein HMPREF9586_00405 [Propionibacterium acnes HL083PA2] gi|328752324|gb|EGF65940.1| hypothetical protein HMPREF9563_02358 [Propionibacterium acnes HL020PA1] gi|328755281|gb|EGF68897.1| hypothetical protein HMPREF9579_01308 [Propionibacterium acnes HL087PA1] gi|328758238|gb|EGF71854.1| hypothetical protein HMPREF9588_00878 [Propionibacterium acnes HL025PA2] gi|328760013|gb|EGF73596.1| hypothetical protein HMPREF9343_02296 [Propionibacterium acnes HL099PA1] Length = 404 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKK 55 E + G+ + I+ + + + + F AP+ L + T++PI++ + K Sbjct: 49 EVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHK 108 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + ++ + + + +L S IP Sbjct: 109 CPR-WISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSY-----------------IPQ 150 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 151 MEKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMI 210 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 211 FMVMDTPQMHDRLRMAGSRKPDVVLA--LESFASGIRKYWLVTTVFGLIVALFDWAALLI 268 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP G I ++ L K A + + ++ F++ Sbjct: 269 IGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQS 328 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 329 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 364 >gi|167747388|ref|ZP_02419515.1| hypothetical protein ANACAC_02107 [Anaerostipes caccae DSM 14662] gi|167653366|gb|EDR97495.1| hypothetical protein ANACAC_02107 [Anaerostipes caccae DSM 14662] Length = 387 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 110/327 (33%), Gaps = 12/327 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSF----------ISKKEESSTFLAVIATVSVMCLFIVPLLF 80 P +I + P+ + F +K + + ++ + L+F Sbjct: 50 IFPFFIGFLIAYVMNPVVTFFNEKVFSSLFGEKRKRLCRACAILTTYIILVGALTICLIF 109 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + +KEL S++ + + + + + G++ +EL + + Sbjct: 110 IVPQLYDSIKELSSQIPVISDQIMGLLDHYKESGSGVFPAELMETLETKSLPKLVQLSNQ 169 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + T I + F+ F + ++ + I + + + ++ + Sbjct: 170 MLTEAIPMLYNFSVSFVKWLFNLFIAFVVSIYMTADKQLLKSACRRLIFAVFPYDAAVPV 229 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 + + +G ++ ++ G + L +P V + VI + MIP G Sbjct: 230 IHGLKECHNIFSGYIIGKSLDSLIIGFLCFLLMSLLNLPYTVLISVIVGVTNMIPYFGPF 289 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + L I L + ++ F L P ++G + + F + G Sbjct: 290 IGAVPGAFILFIVSPYKTLIFLGMILVLQQFDG-LVLGPKILGNSTGVRPILILFSITVG 348 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 G LG+F+G A++ + + Sbjct: 349 GAYFGPLGMFLGVPFFAVVQYLVNNWV 375 >gi|292559015|gb|ADE32016.1| probable permease [Streptococcus suis GZ1] Length = 376 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 121/337 (35%), Gaps = 7/337 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G + I F + E+ S +++++ + I L + + Sbjct: 35 LLGSMNSLFIGAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFALIVTGLVV 94 Query: 87 LEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS--LKILSETFLKT 143 + + LV+ V L + +P+ ++ + + ++ L + + + L L L + Sbjct: 95 IVLPTLVTTVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQLKNLTLIS 154 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + I +++I + + P ++ Sbjct: 155 SLVTPILSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATLPEKAVRV 214 Query: 204 SRIVPKVIRST----FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +VI T + + A G ++ +Y L+G+P G++ +++ +P P Sbjct: 215 VNYIGEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLSFVPYIGP 274 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 S +S + N A I I + P +VG + LP L T + G Sbjct: 275 FSACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFTLAAALIG 334 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GLLG+ + A++ + +E + + + + ++ Sbjct: 335 GNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQGEL 371 >gi|167855508|ref|ZP_02478271.1| putative permease perM-like protein [Haemophilus parasuis 29755] gi|167853374|gb|EDS24625.1| putative permease perM-like protein [Haemophilus parasuis 29755] Length = 354 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 109/338 (32%), Gaps = 13/338 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + I+ I ++YF P+L A++ + WPI +K + VI Sbjct: 15 DPQIVALLAILIIGFGTIYFFSDLLMPLLIAIVFAYLLEWPI-RFLTTKLKLPRMLSLVI 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + + + + + + + WL +P + Sbjct: 74 VLGGFISLSVFLFVVMLPSLWNQAVTFLKDLPSMFNL---LNAWLEALPEHYPELIDYAM 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K TF + S G+ + + ++ FF +D Sbjct: 131 LDSLMATAKTKILTFGDSLLSFSFNSLVSLVGLGIYAFLVPLMV-----FFLLKDKTLFM 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ + I + G + + G+V + + + L Sbjct: 186 RSALRFMPK-NRHLATRVWGEMQLQIANYIRGKFLEILIVGVVTYIIFLFFDLRYPLLLS 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V + ++P GA + V++ L + + L + ++D + PFL Sbjct: 245 VAVGLSVLVPYIGAVLVTIPVALVALFQFGLSPDFYYLLLAFVISQLLDGNLVVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 305 AVNLHPLTIIVAVIIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|314984415|gb|EFT28507.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] Length = 404 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKK 55 E + G+ + I+ + + + + F AP+ L + T++PI++ + K Sbjct: 49 EVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHK 108 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + ++ + + + +L S IP Sbjct: 109 CPR-WISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSY-----------------IPQ 150 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 151 MEKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASHTTSVVTMIIVILTGMI 210 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 211 FMVMDTPQMHDRLRMAGSRKPDVVLA--LESFASGIRKYWLVTTVFGLIVALFDWAALLI 268 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP G I ++ L K A + + ++ F++ Sbjct: 269 IGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQS 328 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 329 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 364 >gi|325110550|ref|YP_004271618.1| hypothetical protein Plabr_4019 [Planctomyces brasiliensis DSM 5305] gi|324970818|gb|ADY61596.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 523 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 89/247 (36%), Gaps = 15/247 (6%) Query: 103 GIPVPRWLSDIPGGMWASELWT-KHLSHPQSLKILSETFLKTNGIDFIPRFASR----FG 157 G P W ++ P ++L K++ PQ +K+ T + + Sbjct: 246 GESAPEWPAEDPTLEDQTDLMEPKYIFEPQIIKLDPSTASSQVRQRYGGVLGAYSPVEIF 305 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI--VPKVIRSTF 215 FLD L + + +F + E L IS++ + IR Sbjct: 306 RSFLDSVLGVFNYTLIVFLMLAFLLLEWSRFGQKLERLPGNTQSHISQVTQILDSIRRYM 365 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV-SIYLLIKGN 274 T++++ GL++ L G + G + + IP I V ++++L+ Sbjct: 366 FIKTLVSLLTGLLVTIWLMLLGTNYAILWGTVAFLFNYIPTIGSIIAGIVPTLFVLVDQG 425 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 +A + + + F+V L P ++G + L F LV G +GPV Sbjct: 426 PVDAAAVGVAFLVVNFLVGNVLEPRIMGEGLGLSTFVVFLSLV-------FWGFVLGPVG 478 Query: 335 MALIAVI 341 M L + Sbjct: 479 MLLAVPL 485 >gi|221134612|ref|ZP_03560915.1| putative permease [Glaciecola sp. HTCC2999] Length = 356 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 107/325 (32%), Gaps = 12/325 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + PVL A+++ + K S T I V + + ++ L L + Sbjct: 38 YIMPVLIAIVLAYLLDSSVGQLE-KLNLSRTLATTIVMVLFIGISLIGTLSLLPTISKQS 96 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV ++ L Q WL +P + L T+ ++ S + N I Sbjct: 97 VNLVEELPLIWQG---AQAWLLTLPE-QYPELLHTEQITSMMGKVNESLVGITQNIISVS 152 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G + +I + + +FF +D L L + ++ + Sbjct: 153 FSSLVSVGA----LLIYLILVPLMMFFMLKDKPLFMDNLSYLLPKERRLIY-QVGSEMNT 207 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I + G I + G A+ L + + LGV+ + +IP GA + V+ Sbjct: 208 QIGNYIRGKVIEILIVGAASCIAFVLMDLRYAILLGVLVGLSVLIPYIGAAVVTIPVAFV 267 Query: 269 LLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + L L I + + P L + L L ++ G G Sbjct: 268 ALFQWGFSAEFGYLMLVYFIIQALDGNLIVPILFSEAVALHPLYIIIAVLFFGGIWGFWG 327 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 +F L L+ + + E+ Sbjct: 328 VFFAIPLATLVKALISAWSNDLDED 352 >gi|218440376|ref|YP_002378705.1| hypothetical protein PCC7424_3442 [Cyanothece sp. PCC 7424] gi|218173104|gb|ACK71837.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 397 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 103/303 (33%), Gaps = 15/303 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL---FYYGML 87 F +L A ++ F + SK + S V+ +V+ V L + + Sbjct: 55 FVIILLASVVAFLLSYPVNWLESKGVKRSQAAIVVFLFTVLTFLAVGLTLVPVAYTQAQQ 114 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + L + + + + + + L + S + + Sbjct: 115 LVARLPEWLDSGQHQLMMLNERVDEWGLPLSLDGLIAQINSRLAAEL--------QSLAG 166 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 A + + L ++ II F+ I Q L + + R Sbjct: 167 RTLNIAVSLTVFTVVKLLDVLLTIILTFYLLLHSRDIWQSLIEWLPKPIQRPFSQTLR-- 224 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ FLG I A + L + L VP + G+ +MA+IP G + V++ Sbjct: 225 -SSFQNYFLGQIISATCMAVGLTGGFLLLKVPFGLLFGLSIGLMALIPFGGSVGIVTVTL 283 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ ++ A + + IV+ + P ++G L L+ G R GLLG Sbjct: 284 -LIALRDVGLALQVLASALVVQQIVENGIAPRILGSVTGLNPFWILLALLSGARIGGLLG 342 Query: 328 LFI 330 + + Sbjct: 343 VIV 345 >gi|17230438|ref|NP_486986.1| hypothetical protein alr2946 [Nostoc sp. PCC 7120] gi|17132040|dbj|BAB74645.1| alr2946 [Nostoc sp. PCC 7120] Length = 367 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 111/321 (34%), Gaps = 15/321 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ + + + A+++ F +P+ S + K+ + + V + + I Sbjct: 27 LVFAFFQYFQPLVTIFVLAILLAFVLNYPV--SALQKRGIKRSNAVGLVFVLTVIILIAS 84 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + + E+ + L + L+D G + L+ Sbjct: 85 GVTLLPIAIEQFHEIAKILPLWIDSSQEKLQNLNDWAIGQHFKLNIGQILTRIIDKIPDE 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + I I ++ F+ DG I + + + L Sbjct: 145 LESVSNQTFKIIVETVDSISEA--------IVTVVITFYLLVDGQRIWEGI---FKKLPM 193 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + +K+ + + K ++ +G +A+ G + V + G+ +++IP G Sbjct: 194 SLAQKLKQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLFGLGVGFLSLIPFG 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + V ++ + + A + + I+D+ + P L+G L + L+ Sbjct: 254 D-VVSLIVITLIVATHDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLL 312 Query: 318 GGVRTMGLLGLFIGPVLMALI 338 G GLLGL I + LI Sbjct: 313 VGTYIGGLLGLLIAVPVAGLI 333 >gi|255002913|ref|ZP_05277877.1| permease perM-like protein (perM) [Anaplasma marginale str. Puerto Rico] gi|255004041|ref|ZP_05278842.1| permease perM-like protein (perM) [Anaplasma marginale str. Virginia] Length = 439 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 109/344 (31%), Gaps = 11/344 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-----TVSVMCLFI 75 V ++ ++ A ++ + P+ + S I + + +F+ Sbjct: 91 AVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLESIGLPRPVSSFAIIFSSVGVFAALLVFL 150 Query: 76 VPLL----FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 VP+ +++ + N + G M L +L Sbjct: 151 VPIAYSQTLALAKLLVDKLPFAGVEGIKNALLAYDMLRYDGVIGAMNPEALSPHNLFSGN 210 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + + G+ + ++ LF+ + + + Sbjct: 211 HVEFIKLLDGLYKNFIKVAVGVVQSGVGIGTIAAKVFITLLLLFYILGSWPIVVKNALLM 270 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + G T + + + + + G+ + LGVI+ IM Sbjct: 271 VPRHYLEGFSHCMSKIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLVLGVISGIM 330 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPF 309 IP PI ++ L I + + + V + P L+ + L Sbjct: 331 TFIPYIGPILCASLGACLAILQDFSWTGTAAVILVFVVGNVVESNIITPVLLSKKLDLNP 390 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+V GLLG + + A+++V+ ++ K + Sbjct: 391 GWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLTHFAVEKYKHSN 434 >gi|297587472|ref|ZP_06946116.1| MFS superfamily major facilitator transporter, macrolide symporter [Finegoldia magna ATCC 53516] gi|297574161|gb|EFH92881.1| MFS superfamily major facilitator transporter, macrolide symporter [Finegoldia magna ATCC 53516] Length = 381 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 109/330 (33%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F A ++ I + K I+ + + + + F+ Sbjct: 44 IISPFIIGAALAFVLNMPMNFIENKLFKKWTSKPGLKRAISLLISLVIVSAIIAFVVILI 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ + R +I T ++ L + + +L NG Sbjct: 104 IPNFFEAIKSLIRGIPVLVEKLRKYPEI-AKQLDKIYDTYAITSTHDLVVKLKPYLTKNG 162 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS- 204 +D + +F ++ A++ + Q + K+I Sbjct: 163 LDILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFSGKTAKRIIV 222 Query: 205 --RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ + S F G I A G + +L +P+ + V+ A+IP I Sbjct: 223 FFKVAYEKFYSFFKGQFIEAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALIPLVGAILG 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A+ +++ + A ++ + P +VG + LP + + G Sbjct: 283 AALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLVAVTIGAAL 342 Query: 323 MGLLG-LFIGPVLMALIAVIWKESIMAIKE 351 G++G L P+ + ++++ +K+ Sbjct: 343 SGIVGMLIFVPIFATIYELLYRYKEKKLKD 372 >gi|298491600|ref|YP_003721777.1| hypothetical protein Aazo_2806 ['Nostoc azollae' 0708] gi|298233518|gb|ADI64654.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 372 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 112/331 (33%), Gaps = 12/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L L+ L+ + +A+++ T + SF S ++ I Sbjct: 12 LVLSLYILWQLREVLLLIFAAVVLATTLNRLARSFQS-LGMKRGLAVFLSVSIFFAGVIG 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + +EL +V + + W+ + E + L Sbjct: 71 FFWLIVPPFTQQFQELTLRVPQGFER---INTWVDE--QRTQIPEQLVPFIPDLNGLIAE 125 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + + + F L L+I+ +++ F + + + L + Sbjct: 126 AQPLF-----NRVLGNSFAFVSGSLVIVLNILLVLVLTGMFLANPNAYRKVFVRLFPSFY 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + I + G I GL+ + GV + +ALGV+ M +IP Sbjct: 181 RRRVEGILSQCEISLERWVTGAFIAVCVVGLMSMVGLSILGVKAALALGVLAGFMNLIPN 240 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P ++ + + + + + + + P ++ + L T Sbjct: 241 LGPTMSVVPAMAIALLDSPWKPILVLILYFFIQQTESNFITPVVMAHQVSLLPAVTLVSQ 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + V G LGLF+ + + ++A IW E ++ Sbjct: 301 LFFVTFFGFLGLFLA-LPLTVVAKIWVEEVL 330 >gi|288557140|ref|YP_003429207.1| hypothetical protein BpOF4_21599 [Bacillus pseudofirmus OF4] gi|288548434|gb|ADC52315.1| conserved sporulation related membrane protein [Bacillus pseudofirmus OF4] Length = 323 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 112/319 (35%), Gaps = 3/319 (0%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A + PI ++ + + +I T + + ++ + + + + E Sbjct: 4 PLVFAWLSAVLLSPIVRLLEKRRIKHDVAVVIIFTSFLTFISLI-GVLVITKIFMHINEF 62 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V H + + + E+ Sbjct: 63 VQNAPTYLNHVTNAWVVIQYDFERKFEDLPPDFVNEINFHVINTLESTRIHLSNIDFIGG 122 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 S F + Y +S + +IALF F D ++ + S + + KV+ Sbjct: 123 VSNFIVGIPSYLVSFLVYLIALFLFLLDLPTLKSKFYSFLTADTSNKLTYMLSRLRKVLI 182 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F I++I ++ + + ++ + ++P G+ I + Y I Sbjct: 183 GFFKAQFIVSIPIFILSYIGLLFIYPDIALIMALVIWFIDLVPLIGSIIILGPWAFYQFI 242 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ A L + A+ L ++ +T+ P ++G I L L T L G+ G +GL +G Sbjct: 243 IGDTELAIKLTIL-AVVLLVIRRTVEPKIMGNQIGLSPLATLIALYLGLVLFGAIGLILG 301 Query: 332 PVLMALIAVIWKESIMAIK 350 P+L+ + I+ K Sbjct: 302 PLLVITFKSTREAGIIKWK 320 >gi|237742379|ref|ZP_04572860.1| permease [Fusobacterium sp. 4_1_13] gi|229430027|gb|EEO40239.1| permease [Fusobacterium sp. 4_1_13] Length = 344 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 118/327 (36%), Gaps = 8/327 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V+ +F + L + ++ Sbjct: 19 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIAFVVLIFAI-LSLIVIPEII 77 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++++ + ++ + ++T ++ S TN Sbjct: 78 SSLKVLNNIYPYISEKATTMG--KNLVNYLAEKNIYTVNMDEVNSYFTNFIANNVTNIRK 135 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 + + + ++ + F D +++ L+++ +F Y Sbjct: 136 IVSALFGSLVDWTIGFT-NLFLAFVLAFLILLDKKHLTKTLENIIIIIFGVKNTPYIMNK 194 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ ++ + G I++ GL + + G P V+ + MIP I Sbjct: 195 LKLSKEIFLNYVSGKLIVSAIVGLCVYIVLLVTGTPYAALSAVLLGVGNMIPYVGSIIGG 254 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ +L++ L + I + + P ++G + L ++ Sbjct: 255 IIAFFLILLVAPIKTIVLLIAITISQLVDGFIVGPKIIGNKVGLNTFWVMVSMIIFGNLF 314 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+F+G ++++I + + + + A + Sbjct: 315 GIVGMFLGTPILSIIKLFYVDLLKAKQ 341 >gi|282896546|ref|ZP_06304566.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281198652|gb|EFA73533.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 376 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 121/314 (38%), Gaps = 19/314 (6%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ A ++ F +PI +++ K+ +AV+ + + + + + LF + + Sbjct: 32 IVILVGASVLAFLLNYPI--TWMQKQGARREQVAVLVFLIALSILLALGVTLFPLALTQA 89 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGID 147 ++LV+++ P W+ + + + P +L + + + Sbjct: 90 RQLVNRL----------PEWIDSGRSQLMILNEKAEMMGLPINLDAIVVQINDRVKSQLQ 139 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I ++ + L + ++ F+ + G + Q L + F + + R+ Sbjct: 140 AITAQVLNLAVVTVTSLLDFLLTMVLTFYLLQHGDELWQSLVEWLPNKFREPFSRTVRL- 198 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ F+ I++ L ++ VP + G+ IMA+IP G A++ Sbjct: 199 --SFQNFFITQLILSTCMASALIPSFLWLKVPYGLLFGLTIGIMALIPFGGS-VGIAITT 255 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ +I + I I++ L P ++G L + ++ G R GLLG Sbjct: 256 LLVSLQDISMGVRVLAAAVIVQQILENILAPRILGNFTGLNPVWVLISVLTGARVGGLLG 315 Query: 328 LFIGPVLMALIAVI 341 + + +I + Sbjct: 316 VIVAVPCAVVIKTV 329 >gi|184201420|ref|YP_001855627.1| hypothetical protein KRH_17740 [Kocuria rhizophila DC2201] gi|183581650|dbj|BAG30121.1| hypothetical membrane protein [Kocuria rhizophila DC2201] Length = 455 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 68/352 (19%), Positives = 116/352 (32%), Gaps = 18/352 (5%) Query: 13 RWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +++ + +++L G PVL A +I P + A+ A Sbjct: 47 RVLLIVAGVGVVWWLLGHVTTVLIPVLLAALIAGPLSPA----VRWLRARHFPSALAAIT 102 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V L + L + VV Q + G + S L S Sbjct: 103 -------VELGLILVVLGLLVLSGQQIVVGFAQLSDKAVAGFQKLLGMLEDSPLKLTTDS 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q L T + I A FG I M+ L FF DG +I L Sbjct: 156 MSQWFSELGNTL--QENSNAILSGAMTFGSTAGSILTGTILMLFVLLFFLFDGENIWLFL 213 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A R + +A + L +G +L GVP + +GV+ Sbjct: 214 VKLFPRRARAAVNGAGRRGWISLAQYVRIQVFVAFVDALGIGLGAFLLGVPLALPIGVLV 273 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP GA ++ + L+ + A + + I L+P ++G + L Sbjct: 274 FLASFIPIVGAVVTGAVAVLVALVAVSPGIALAMLGVVLLVQQIESNILQPLIMGKAVSL 333 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + G G++G +MA I + E+ ++I+ Sbjct: 334 HPVAVLLAVATGSMLFGIVGALFAVPVMAFANTIVRYLAARSWEHDDQIAWE 385 >gi|15894017|ref|NP_347366.1| permease [Clostridium acetobutylicum ATCC 824] gi|15023611|gb|AAK78706.1|AE007588_4 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325508144|gb|ADZ19780.1| permease [Clostridium acetobutylicum EA 2018] Length = 383 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 81/201 (40%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A+ F +++ LS IF I L + G + L + + ++ ++ Sbjct: 178 ATTFASTAIEFVLSFIFSIYILAQKNKLGTQVKMVLYAFFKKQKVDSALEVLKLTSNTFS 237 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + G ++I G++ + +P + + +I A ++IP I +S+ LL+ Sbjct: 238 NFITGQCTVSIILGVMFFIVMTILKLPYAIEVSIIIAFFSVIPMIGSIIGFVLSVLLLLI 297 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 N A + D + P +VG + LP + + G + +G+ G+ + Sbjct: 298 FNPIKAGVFVFVFLAIKQVEDNFIYPKIVGNSVGLPSILVLVAITLGGKVLGVPGMIMSI 357 Query: 333 VLMALIAVIWKESIMAIKENK 353 L ++ V+ ++ + E K Sbjct: 358 PLFSVAYVLLRKEVYTRLEKK 378 >gi|258652641|ref|YP_003201797.1| hypothetical protein Namu_2437 [Nakamurella multipartita DSM 44233] gi|258555866|gb|ACV78808.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 386 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 111/363 (30%), Gaps = 21/363 (5%) Query: 6 LNPQGIMRWMIMFIILVSLY--------FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 L+ + I I +++VS + ++ F +L A + P F+ + Sbjct: 24 LDQREIQAATIRILVIVSAWLIAAWVVGVVQHFLFLILLAWLAAIAMEPAIRWFLRR-GV 82 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T V V+ + + ++ + LV P + I + Sbjct: 83 RRTRATAAVAVPVVLIAVGLVVTFEQMLFEQTAALVRSA----------PDRVQSIVDQL 132 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 ++ S L ++ D G ++ + + F+ Sbjct: 133 NSTFGLNLQASQIIVTLRLEPDQIQGVANDLALGALGWLGS-LASVVFDLVTVAVFTFYI 191 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + Q++ I I + ++A + G +W G Sbjct: 192 AAAGPRLVQEVAVWLPPERQPILGAIWDIAEQKTGGYVASKIVLAALSAVFHGIFFWAVG 251 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P + L ++ I A +P A + + + A + L+ + I L Sbjct: 252 LPGWLPLALLAGITAQFVPVIGTYIGVAAPMIVALADQPITAVWILLFAIVYQQIETYVL 311 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P + +++ + G G +G IG + A++ + + + E Sbjct: 312 TPRISRRTMEVNPAIALAAVFVGAAIWGPIGAIIGVPIAAVVVSVVQTYGRRYELVPELA 371 Query: 357 SSN 359 +++ Sbjct: 372 ATD 374 >gi|300024350|ref|YP_003756961.1| hypothetical protein Hden_2844 [Hyphomicrobium denitrificans ATCC 51888] gi|299526171|gb|ADJ24640.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 357 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 112/333 (33%), Gaps = 9/333 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + L L P + L++ + P+ + + +++ V+ L Sbjct: 11 IVTAVVFLYLAQLLAPVLLPFVIGLVLAYFFNPVVDAL-RRLGIPRWASSILLLALVLFL 69 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ L+FL + + LV + + + G E S S Sbjct: 70 IVLALVFLVPILVQQAAGLVEAAPRQIERIKLMIETSARDYLGTRYPEAEATVRSALDSF 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +F+ + + G ++ ++ I F+ +D I +DS Sbjct: 130 ASSMPSFMAG-----VAQSIWNQGAAAFNFVSFVLITPIVFFYTLKDWPKIISSVDSWLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ + + + + G + + A LAG+ + +G+ T + A Sbjct: 185 RDNAGELRALAVEINQRVSAFIRGQGAVCVLLAAFYAVALSLAGLEYGLLVGLFTGLAAF 244 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIV--DKTLRPFLVGGPIKLPFL 310 IP TA +I L I L + G + L P ++G + L + Sbjct: 245 IPVVGWTLGTATAITLAILQFWPETMPILIVIGIMLAGQALESAILSPNIIGSEVGLHPV 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L+ G LGL + + A I V+ + Sbjct: 305 WLIFALLTFSYLFGFLGLLVAVPVSAAIGVLVR 337 >gi|159899941|ref|YP_001546188.1| hypothetical protein Haur_3424 [Herpetosiphon aurantiacus ATCC 23779] gi|159892980|gb|ABX06060.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 403 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 104/312 (33%), Gaps = 23/312 (7%) Query: 16 IMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ I+++SLY + P + A+I + P+ + + + + V+ Sbjct: 20 VLSIVIISLYLVNQAWHIMIPFIWAIITAYIFNPVVTWMQRRTKTPRFWW-------VIV 72 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L+I+ L + + S++ Q +P WL D + + T + Sbjct: 73 LYIIGFTLLTLLVSNVVPLITSQINDLAQT---IPIWLDDAKIYVEQHQALTIRGVEIVN 129 Query: 133 LKILSETFLKTNGI--DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ +P A F + + ++ + F+ +I Sbjct: 130 LREAEREISGAIAAFAKALPGIAPLFLFGLAEGFILLLVYFVVTFYLLLQAETIPNNFYR 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L +++ + +V+ + G ++ I ++ A + V + + + T Sbjct: 190 LIPERHRDEIRQLIGSIDRVLSAYIRGQFLLIIIMSVLSYIALSILQVKYALIIAIATGF 249 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +IP G ++ ++ +G A + D + P LVG Sbjct: 250 LEIIPIIGPYMATAIAALVGFFQGTTPFGWEPWVLALVIIAVYFALRQFEDHFIIPNLVG 309 Query: 303 GPIKLPFLPTFF 314 + + + F Sbjct: 310 HIVNVHPVFVIF 321 >gi|294631801|ref|ZP_06710361.1| membrane protein [Streptomyces sp. e14] gi|292835134|gb|EFF93483.1| membrane protein [Streptomyces sp. e14] Length = 386 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 101/323 (31%), Gaps = 14/323 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L A + P S S+ F + + + + L ++ +++ Sbjct: 36 ILIAFFLALAIEPAVSRMASR-GMRRGFATFLVFLGLAIATAGFVTLLGSMLAGQIIKMI 94 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 I W++ + L H L+ ++ + + A Sbjct: 95 EGFPEYLDSVI---NWVNATFHSHLRRVDIQEGLLHSDWLRKYAQ----NSAAGVLDVSA 147 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 G +F +++ F+F DG + + L S+ A + I Sbjct: 148 QVLGGLFRLLTVALF-----SFYFAADGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGG 202 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIK 272 ++A+ G+ GVP LGV +++ IP A+ + + Sbjct: 203 YLYSRGLMALVSGVAHYVLLQALGVPYAPVLGVWVGLVSQFIPTIGTYLAGALPMLIAFT 262 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 N + A + ++ + + L+P L + + F ++ G +G +G I Sbjct: 263 VNPWYALWVLVFVVVYQQFENYMLQPKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAI 322 Query: 333 VLMALIAVIWKESIMAIKENKEK 355 +A + + + Sbjct: 323 PAVATLQAFLGAYVKRYDVTDDP 345 >gi|153834113|ref|ZP_01986780.1| permease PerM [Vibrio harveyi HY01] gi|148869483|gb|EDL68481.1| permease PerM [Vibrio harveyi HY01] Length = 356 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 118/350 (33%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + TF + Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQMC--RLGIPRTFSVIT 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ + + ++++ +P Sbjct: 73 VILIFIGLMLIAVFGLVPTIWTQVGNLINDIP---NMYAGLQKFIATLP----QRYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + + + +I + + +FF +D + Sbjct: 126 NLQIVETVVTNAKNQAIGLGESVVKGSLASL-VSLATLAVYLILVPLLVFFLLKDKEEMM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + + I + G + + G V + + + L Sbjct: 185 SMASGILPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L + I + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEENEP 353 >gi|320533633|ref|ZP_08034263.1| hypothetical protein HMPREF9057_02151 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134141|gb|EFW26459.1| hypothetical protein HMPREF9057_02151 [Actinomyces sp. oral taxon 171 str. F0337] Length = 437 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 117/344 (34%), Gaps = 33/344 (9%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I V LY ++ FAP AL + T P+ S + V AT +++ +F Sbjct: 32 LTIGAVGLYLIQDLFAPAFFALTLVVTVRPLVSWMTRHRVPR----VVAATAAILLIF-- 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + V Q +P++ +W + + + + Sbjct: 86 ---------TFVVLLFAALAVAVAQLVDTLPQY------APKFQAIWRQTETQLNGMGVD 130 Query: 137 SETFLKTNG----IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T LK + A + M + + F D I + + Sbjct: 131 QSTVLKEVTDVLDTSRLVMVAQTVLGQLTSASAMLGVMAMVVVFLMFDTAKIE--IRTAA 188 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + +RS ++ T+ + ++ W VP + GV++ I Sbjct: 189 LGVLKPGMAAAMVSFCEAVRSYWMVSTVFGLIVAVINAVTLWYLDVPMAITWGVVSFITN 248 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + +I L+ + A + L F++ ++P G + L Sbjct: 249 YIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYVAANFVIQSLIQPKFTGDAVGLNTTT 308 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TF L+ +G +G ++A+ ++ ++++ + + + Sbjct: 309 TFLCLLFWSTVIGAMG-----TILAVPLTLFVKALLIDSDPRSR 347 >gi|209516516|ref|ZP_03265371.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503120|gb|EEA03121.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 351 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 112/338 (33%), Gaps = 8/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + + L+ L+ P L +I + P + A++ Sbjct: 7 QSLIWGAVALSAGILLWSLRAVLTPFLLGAMIAYILQPGVEWLARHRTPR-GLAALLMIS 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +L F E E +V + + P W ++ ++ Sbjct: 66 LFALVITSVVLLAFLVIQEEGPEFAEQVPSLAAKFEAILK-----PRLAWLGITYSLDMA 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + R+ G + + + + + + LF+ D +L Sbjct: 121 SVRDWVAAHLIASEQGAALTVWRYLGTSGNVMMTVVGNAVLVPLVLFYLLYDRHEAFARL 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +S + + + ++ G ++ + LAG+ + +G++T Sbjct: 181 ESFVPRRWLGRTRDFVAEIDHMMSQYLRGQLLVVAILAAFYPVSLALAGLAIALPIGLLT 240 Query: 249 AIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A IP G A A+ LL G+ + + + + + L P LVG I Sbjct: 241 AFAVFIPYIGFATALAMALLAALLQFGDWYGLGAVMVVYGVGQILESAILTPRLVGERIG 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L F L+ + G G+ + A+ A+ +E Sbjct: 301 LHPLAVIFSLLAFGKLFGFFGVLLALPASAVFALALRE 338 >gi|126663637|ref|ZP_01734633.1| Hypothetical membrane spanning protein [Flavobacteria bacterium BAL38] gi|126624220|gb|EAZ94912.1| Hypothetical membrane spanning protein [Flavobacteria bacterium BAL38] Length = 364 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 134/364 (36%), Gaps = 23/364 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEE 57 M + + I+ + ++L+FL + L A++I P+ + K + Sbjct: 1 MTSKDITVGIVKAVAILLVSCLALFFLYKITTVIIYCLVAIVISLLLNPLVNFLKRKFKF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +T AVI + V + I + LF +L E +S + +++ L +I + Sbjct: 61 KNTL-AVITAIVVAFIIISGFILLFVPLILAQSENLSLLDVSSLERNYHL-LLENITIFL 118 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + TK L I S +FIP F + F ++ + ++ FF Sbjct: 119 DSYNINTKQL-------IESSKLSSFTTFEFIPNFLNSFLNTIGNFSVGFASVLFITFFI 171 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ S + L + +++ S FLG+ + ++ +++ G Sbjct: 172 LKENHSFYSKFKKLLPENQKEKILNSIHDINRLLSSYFLGLLLQLTIIMILYIIIFFIFG 231 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA----------TCLFLWGAI 287 V + + + ++ AI ++P P+ + V+ L++ I L G Sbjct: 232 VENAIIIALLCAIFNIVPYVGPLIASIVASLLIMTSGIGTGADFASETLPTAIYVLIGMS 291 Query: 288 ELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + ++D P + L F ++ G++G+ I + VI KE Sbjct: 292 LVQVIDNNFTSPLIFSKSTNSHPLEIFLVILITGILFGIVGMIIAVPFYTSLKVIGKEFF 351 Query: 347 MAIK 350 K Sbjct: 352 PDNK 355 >gi|162147804|ref|YP_001602265.1| hypothetical protein GDI_2020 [Gluconacetobacter diazotrophicus PAl 5] gi|161786381|emb|CAP55963.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 345 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 113/340 (33%), Gaps = 11/340 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ ++++S++ + V +A +I + + + +LA+ V V+ Sbjct: 13 AILLAVMVLSIWLIGDVLMVVFAATLIAVILHNLAAMVERRTRL-PYWLALSLVVVVLLA 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQS 132 I L + + E A + I + + G + AS + L + PQS Sbjct: 72 AIGGLGWSSGPAIAE---------QATRLRIALTTQAHSLRGQLNASTMGRTVLDYLPQS 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L I + ++ ++IA +F L L Sbjct: 123 LGGNQAGGGDNGMGSRIAGSMTGVLSSAFGAAGTLAVILIAGLYFALSPALYVNGLLRLI 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + + + + G + + G++ G W GVP +ALGV+ + Sbjct: 183 PPGHRPAARTLLLVAGRTLWAWTAGQALDMLVVGILSGVGLWFIGVPLALALGVVAGMAN 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP +I L + + A F + P + +++P T Sbjct: 243 FIPYIGAFIGAVPAILLGLSQGTREGLLVMALYAAIQFFEGNVMAPLIQRHAVQMPPGLT 302 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GL GL + L A + + + + E Sbjct: 303 ILSQTVFGTILGLPGLVLASPLTAALLAMMDRATPPLDEE 342 >gi|254448339|ref|ZP_05061800.1| integral membrane transport protein [gamma proteobacterium HTCC5015] gi|198261952|gb|EDY86236.1| integral membrane transport protein [gamma proteobacterium HTCC5015] Length = 360 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 103/315 (32%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I+ SL P L A I + P+ + +LA++ V M Sbjct: 22 LMVIIASLRAAADLLVPFLLATFIAVITTPVLRWLQRR--GLPMWLAMLLVVVAMVGSFT 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + + +P++ + + G M ++ L + ++ Sbjct: 80 LVGALVGSSITDFTR-------------SLPQYKARLGGEMQSA----FALLNSYGIETP 122 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + + + +++ + F + S +L S Sbjct: 123 TALLREHVNPGAAMEMVGKVFNGLGNVLTNAFLIVLTVIFILAETHSFPNKLKSAFTDAD 182 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + ++ ++ + T I++ GL W G+ + G++ + IP Sbjct: 183 HHLVQ--FQLFSHTLQKYMVIKTSISLLTGLCATILTWAIGIDYPLLWGLLAFLFNYIPN 240 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + ++ A + + ++ + P +G + L L F Sbjct: 241 IGSIIAAVPAVLLAFVQLGGLPALGTAIGYVVINVVMGNMIEPRYMGKGLGLSTLVVFLS 300 Query: 316 LVGGVRTMGLLGLFI 330 LV G +G+ + Sbjct: 301 LVFWGWVFGPVGMLL 315 >gi|29828149|ref|NP_822783.1| integral membrane protein [Streptomyces avermitilis MA-4680] gi|29605251|dbj|BAC69318.1| putative integral membrane protein [Streptomyces avermitilis MA-4680] Length = 412 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 76/212 (35%), Gaps = 2/212 (0%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L+ +F+ + I S G ++ + + + FF G + + Sbjct: 183 DLQGKVSSFVSEHRSQLISSALSGAGR-VVEVLTAAVLALFCSIFFLHSGDNYWHWFLAR 241 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 W + R + G+ I+A +++G A + VP + L ++ Sbjct: 242 LPEGAREPWGRAGRAAWRTFAGYTRGIIIVAASNAVLVGIALFALQVPLALPLTLLEFFA 301 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A IP G+PI+ ++ L A + + I L P ++ ++L + Sbjct: 302 AFIPLVGSPIALAVATVVALASRGPVVAIAVLALIVVVGQIEGHLLHPLVMSWAVRLHPV 361 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ G G++G + ++++ + Sbjct: 362 VVALSVIAGSILAGVIGAVVAVPMVSVAWSVL 393 >gi|323486217|ref|ZP_08091545.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323400435|gb|EGA92805.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] Length = 370 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 129/365 (35%), Gaps = 21/365 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWP----IYSSFISKKEESS 59 T + ++ + + +S F+ F P L + +I P + K+ + Sbjct: 5 TEKQRKALLTAGVTAAVYLSFKFILPLFLPFLISYLIALILRPSANFLERKLRVKRRGKT 64 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYY-----GMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + + + I+ LL ++ +E +LV+ V + Q+ WL+ + Sbjct: 65 YAVPIGVIGGIEMILILALLGAGFFYGGRRLFMEANQLVNAVPVWVQNFD---EWLTGMC 121 Query: 115 GGMWASELWTKHLSH---PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + + + L + F + + S FG +++I I Sbjct: 122 HSVETFCRLQEGVLVKMVQDVLLGTARAFKNATMPNLVVNSVSVFGFFIKVAIITVILFI 181 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 ++ ++ +S+ F K+++ +R+ + + + + Sbjct: 182 ASILSLQEMDELRERRYNSIFRREFSLLGKRLALTGNAWLRTQAVILFLTTC----LCIL 237 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 G P ++ G+ ++ +P G I+L+++ + L + F Sbjct: 238 TLIAIGNPYYIIAGIGIGLLDALPIFGTGTVLIPWGIFLMLQQKWYQGVMLLGLYLVCYF 297 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + L+G + L L T + G++ G LG +GPV + LI + +E Sbjct: 298 MRE-FVEAKLMGKKMGLSPLETLMSMYVGLQLFGFLGFILGPVGLMLIEDLVEEYWKNGN 356 Query: 351 ENKEK 355 K Sbjct: 357 NTCNK 361 >gi|237749032|ref|ZP_04579512.1| predicted protein [Oxalobacter formigenes OXCC13] gi|229380394|gb|EEO30485.1| predicted protein [Oxalobacter formigenes OXCC13] Length = 359 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 119/317 (37%), Gaps = 7/317 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P ++ I+ + P+ S + S + + V V+ I + + ++ + Sbjct: 33 TPFIAGAILAYALNPVVDWLRSLRIGSFRIPRLASVVIVVLFLI---SLVTTFALIMIPM 89 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF--I 149 L+ + + + +S+ + + + KIL+E F + + Sbjct: 90 LLKEWPILYEQIPAFVAKVSNHLNPVLNEIGIQMPVDNAGVKKILTEQFFPKGDGVWKSL 149 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A G L + ++I + + LF+ D ++++L + + + V Sbjct: 150 IASAKFGGTAVLTWAWNLILIPVVLFYLLLDWHILTRKLRDMIPRRWVGKTIRFCHEVNT 209 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSI 267 ++ G ++ + + A LAG + +G++T +MA +P F A++ Sbjct: 210 MLAQYLRGQLLVMLILSIYYSLALALAGYNVALPVGIMTGLMAFVPYIGICIGLFLAITA 269 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + L + + P LVG I+L L F L+ + G +G Sbjct: 270 TLVQFSGMEAWVTLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLFVIFALLAFAQLFGFVG 329 Query: 328 LFIGPVLMALIAVIWKE 344 + + A+++V +K Sbjct: 330 ILLALPSSAILSVAYKH 346 >gi|39997548|ref|NP_953499.1| hypothetical protein GSU2453 [Geobacter sulfurreducens PCA] gi|39984439|gb|AAR35826.1| membrane protein, putative [Geobacter sulfurreducens PCA] Length = 350 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 109/336 (32%), Gaps = 29/336 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFF-----APVLSALIIGFTSWPIYSSFISKKEESST 60 + P+ I L L G F + VL++L+I + P +K Sbjct: 1 MRPRDAAHIAWFLAITFGLVLLAGHFAVHSLSAVLTSLVIAYLLNPAMKFMEAKGLGRLP 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AV+ L + + + VPR++ ++ Sbjct: 61 AIAVLY-----------LSIAVGILLALILLIPYLSHQLEAFPRAVPRYVDNL---QLVM 106 Query: 121 ELWTKHLS------HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E W L+ L +E LK ++ + + F +++ I + Sbjct: 107 ETWKGRLTPYYGGEEGTWLIARAEESLKKLALELTGKGYQQLTRAFFG-LFNLVLAPILV 165 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF + + H ++++ + + + L + + G++ A + Sbjct: 166 FFMLYYKDFVKDLVLRFVPHRERPSFREMGGRIKRSLERFILAQLLDCVIVGILSALALY 225 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNI-FNATCLFLWGAIELFI 291 G+ + G++ +++P + I G++ + I + I Sbjct: 226 AIGIEFPLLNGLVAGFASVVPFVGVMVAVIPPALIGYAETGDMSVIPLVCAAYFVISVII 285 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 ++P L+ G ++L L F L+ MG G Sbjct: 286 EGNLIKPLLMRGTLRLNPLAVIFVLMAMGELMGFWG 321 >gi|315302384|ref|ZP_07873255.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] gi|313629240|gb|EFR97502.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] Length = 348 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 118/355 (33%), Gaps = 25/355 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + R ++ +I + LY L+ +L I F + + + + + Sbjct: 5 DRLKENNTARRVLVFVLIGMVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V + ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYTLVAAFLYIAIVHFLPILIDQISQLVGSLVKIYNN--PSDNTVVKWVVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------TGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L G P Sbjct: 164 RVTSFTGQFLASKVGFIFKEAAFFGKKFVATFGVVLEAQLMIALVNTIITTIALYLMGFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + L I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCVPLVLIAYTVGGFQDVFYILLTVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ LP TF L+ G+ GL +G + + I KE + Sbjct: 284 KLMSSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILDVRNAEDKEKR 338 >gi|300728368|ref|ZP_07061730.1| membrane protein [Prevotella bryantii B14] gi|299774287|gb|EFI70917.1| membrane protein [Prevotella bryantii B14] Length = 328 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 115/333 (34%), Gaps = 19/333 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P A + + +PI LA+I T+ ++ + I L + ML+ Sbjct: 2 PFFIAWLFAYLLYPIVKFIQYNMHVKVRALAIILTLILVVVVIGALYYAIIPPMLDQFAR 61 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ-SLKILSETFLKTNGIDFIPR 151 V + RWL + L + Q ++ ++ + + Sbjct: 62 FEDV---------LNRWLGQTTHSNSLTTLIKNWFVNNQVEIEHFLKSKDFNDAVKTTMP 112 Query: 152 FASRFGMIFLDYCLSII---FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 +SII ++ +FF D ++Q + +W+++++ V Sbjct: 113 KVFNVLGQTASIVISIIASMITLLYMFFILLDYEYLTQNWIKIFPKKNRPFWQELAQDVE 172 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + G ++A+ G++ + + G P + LG++ I+ ++P + + Sbjct: 173 HALNNYIRGQGLVALIMGIMFCIGFTIIGFPMGIGLGILIGILDLVPYLHTFALIPTAFL 232 Query: 269 LLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ G F L I I D + P ++G + L L Sbjct: 233 AMLKAADTGENFWIVFGSAVLVFIIVQIITDFIVTPKVMGKAMGLNPAVLLLSLSVWGAV 292 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G +GL I L LI W+ + E + Sbjct: 293 LGFIGLIIALPLTTLIMAYWQRYVTREHEETPQ 325 >gi|51893523|ref|YP_076214.1| hypothetical protein STH2385 [Symbiobacterium thermophilum IAM 14863] gi|51857212|dbj|BAD41370.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 367 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 120/340 (35%), Gaps = 15/340 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + L+ ++ AP L A+++ + P+ + + + + + Sbjct: 17 LVLALAWGLWTIRPVLAPFLLAVVLAYLLAPLVNRLVGLGLPRPWAILAVYAALAAAGVL 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V ++ L + E++ L + L + + L W + P L+ Sbjct: 77 V-VVKLVPSALTEVRRLTEAIPLYSARAREMADGLQR----------WARDAGLPPELRE 125 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI----IALFFFYRDGFSISQQLDSL 191 + + + + + L+ +F + F+ +D ++ Sbjct: 126 SLDRSITNIEVRSVAALHRLVDIQTLEAAAGFLFSLALAPFLAFYLLKDLDYFRERFVRS 185 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++ R + +VI G ++ + G + +A L G+ V LG+ +M Sbjct: 186 LPRRWRQDIIQLLRELDRVISGFVRGQILLGLSVGALAAAASSLLGLRFAVLLGIWAGLM 245 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P+ ++ + + + + L I + + L P ++G + L + Sbjct: 246 EFIPYVGPVLGAVPAVLSGLAQSPWRGLQIALVFLIIQQLENAVLSPKIMGESVGLHPIG 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ G G GL + AL+ V+W + + E Sbjct: 306 VLLVVLAGGYLAGPWGLILAVPAAALVRVLWSFVVARLTE 345 >gi|126659691|ref|ZP_01730820.1| hypothetical protein CY0110_29194 [Cyanothece sp. CCY0110] gi|126619036|gb|EAZ89776.1| hypothetical protein CY0110_29194 [Cyanothece sp. CCY0110] Length = 365 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 123/346 (35%), Gaps = 18/346 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-----LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 M PQ I+ ++ ++ L + G + +L+A +I F + Sbjct: 1 MNSWFSRPQKILVTWLLILVTGWLTVKTLSYIGGLISLILTASLIAFLLNYPVRGLKTVL 60 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + A + + + + I + L + + ++L++K+ + G L Sbjct: 61 P--RSLAATLVYLGAIFIVIFLGITLLPPVVNQGRQLITKLPGLLEEGQLQLITLQGFIN 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 S + + G + ++ + +I +I+ F Sbjct: 119 AKKLPIDLQFLASQILDKVEAQTEDIASTGFGLVL--------GTFNWFIDLIVVIVISF 170 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + DG I + + + P ++ + K ++ G I+ + + L A+ L Sbjct: 171 YMLLDGEKIWKSIINF---FSPQIRDVLTTTLKKNLQRFLTGQLILGLFMAVSLTIAFRL 227 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P + V +M ++P +LI N + A + + I + D Sbjct: 228 LGIPFFLLFAVFIGVMEILPFIGATLGIGTVTIILIFINWWLAVQVLVVAVIIQQVKDNL 287 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P ++G LP + F L+ G + GLLG+ + L +I I Sbjct: 288 IAPRIMGNLTGLPPVMIFIALLLGAKIAGLLGVILAIPLTGVIKGI 333 >gi|194466814|ref|ZP_03072801.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] gi|194453850|gb|EDX42747.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] Length = 372 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 119/358 (33%), Gaps = 28/358 (7%) Query: 6 LNPQGIMRWM---IMFIILVSL--------YFLKGF-------FAPVLSALIIGFTSWPI 47 ++ Q W+ ++ + + +L + + F F P++ + + + P+ Sbjct: 1 MSKQKFYHWLFWPLLLLTVATLIWMCTKIQFIFQPFLTFISVVFVPLIISGFLYYMLNPV 60 Query: 48 YSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 F I + + +++ + ++ + + + L + E+ LV + Sbjct: 61 LKLFMKIKIGRFHMNRGIASLLIVLLLIVIVVGGIAMLIPPVVKEISTLVRNMPQTVTGI 120 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + I + S L L+ + + + + Sbjct: 121 QHL------INDTIEHSFLRNVDLNAYYRQFDHQLAGYAQKVLQGLSTRVGDIIGMLTNV 174 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I + + LF+ +DG + + + + + S G I + Sbjct: 175 TVVTITVPVMLFYMLKDGSKLIPSIQKWLSPHHAKEVNDLLGKMNSTLSSYISGQMIECL 234 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G+ Y + G P + LG++ + +IP P A ++++ + + + Sbjct: 235 FVGVFTSIGYVIIGQPLAIVLGIVAGLTNIIPYIGPYIGIAPALFVALTMAPNKIIWVIV 294 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + P ++G +++ L L+ G+ G+ + A+I + Sbjct: 295 VVIVVQQVDGNIVYPNIIGKTLQIHPLTIIMLLLAAGHIAGIGGMILCIPFYAVIKTV 352 >gi|169829810|ref|YP_001699968.1| hypothetical protein Bsph_4383 [Lysinibacillus sphaericus C3-41] gi|168994298|gb|ACA41838.1| UPF0118 membrane protein [Lysinibacillus sphaericus C3-41] Length = 365 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 95/294 (32%), Gaps = 9/294 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY- 84 LK F P+L + + + PI +K + +++ V + ++ Sbjct: 38 ILKAIFIPLLLGGVFYYVTEPIQRFLEKRKFPR--WASILTIVFGLIGIAGIFGWIIGNP 95 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ +LV + + + L+D + + + + + Sbjct: 96 IAEQVNKLVKNAPMISSSISTSIQQLTDY-VLLNKDNFPQQVNDVIEKMANSVQDVAMVA 154 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 FI S + L + F+ F +D + + + KK Sbjct: 155 SKGFISFLQSIVSVSLLAVLIPFFFI-----FMLKDHEKFAPSIYKYFSGERQQWVKKTL 209 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V+RS G I+ L++ Y + G+ + L + M MIP P Sbjct: 210 SEIDDVLRSYIQGQLQISFLLALIMYVGYLIIGLEYSLLLVIFAFFMNMIPFIGPWIAFT 269 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + + + + + + I + P ++G + + L ++ Sbjct: 270 PALIVAVIQDPILVVWVSVVTLVAQQIDSNFITPNVMGKSLDIHPLTVITIILA 323 >gi|56416572|ref|YP_153646.1| permease perM-like [Anaplasma marginale str. St. Maries] gi|222474939|ref|YP_002563354.1| permease perM-like protein (perM) [Anaplasma marginale str. Florida] gi|56387804|gb|AAV86391.1| permease perM-like [Anaplasma marginale str. St. Maries] gi|222419075|gb|ACM49098.1| permease perM-like protein (perM) [Anaplasma marginale str. Florida] Length = 450 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 109/344 (31%), Gaps = 11/344 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-----TVSVMCLFI 75 V ++ ++ A ++ + P+ + S I + + +F+ Sbjct: 102 AVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLESIGLPRPVSSFAIIFSSVGVFAALLVFL 161 Query: 76 VPLL----FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 VP+ +++ + N + G M L +L Sbjct: 162 VPIAYSQTLALAKLLVDKLPFAGVEGIKNALLAYDMLRYDGVIGAMNPEALSPHNLFSGN 221 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + + G+ + ++ LF+ + + + Sbjct: 222 HVEFIKLLDGLYKNFIKVAVGVVQSGVGIGTIAAKVFITLLLLFYILGSWPIVVKNALLM 281 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + G T + + + + + G+ + LGVI+ IM Sbjct: 282 VPRHYLEGFSHCMSKIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLVLGVISGIM 341 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPF 309 IP PI ++ L I + + + V + P L+ + L Sbjct: 342 TFIPYIGPILCASLGACLAILQDFSWTGTAAVILVFVVGNVVESNIITPVLLSKKLDLNP 401 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+V GLLG + + A+++V+ ++ K + Sbjct: 402 GWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLTHFAVEKYKHSN 445 >gi|255327349|ref|ZP_05368423.1| integral membrane protein [Rothia mucilaginosa ATCC 25296] gi|255295629|gb|EET74972.1| integral membrane protein [Rothia mucilaginosa ATCC 25296] Length = 408 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 98/289 (33%), Gaps = 10/289 (3%) Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + +V + G ++ VS A Q + WL ++ A ++ + Sbjct: 93 MILVLAGIISLTGQQILRGFVSMADKAVQGYQQLIGWLKNLGYEFGADQMNQLLDQMESA 152 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L S+ G + + + L FF +G I + L Sbjct: 153 VTNNPSSVLHG---------VSQVGSTAAEVATGTLLTLFTLVFFLMEGERIWLFVTRLF 203 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 A R K + + ++A + + +G + GVP + LGV+ + + Sbjct: 204 PKDARAAVNGAGRAGWKSLGAYVRVQILVAAIDAIGIGVGAAILGVPLAIPLGVLVFLGS 263 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P GA IS + L+ A + + + L+P ++G + L L Sbjct: 264 FVPVIGALISGAVAVLLALVALGPVQALIMLGIVLLVQQLESHILQPLIMGKAVSLHPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 F + GG G +G +A++ + + E + F Sbjct: 324 VIFSVAGGSMIFGAVGALFAVPTLAVVNAVVRYLANRDWEKEAPREEEF 372 >gi|156975460|ref|YP_001446367.1| hypothetical protein VIBHAR_03191 [Vibrio harveyi ATCC BAA-1116] gi|156527054|gb|ABU72140.1| hypothetical protein VIBHAR_03191 [Vibrio harveyi ATCC BAA-1116] Length = 356 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 118/350 (33%), Gaps = 14/350 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YF AP+L A+++ + WP+ + TF + Sbjct: 15 DPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQMC--RLGIPRTFSVIT 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ + + ++++ +P Sbjct: 73 VILIFIGLMLIAVFGLVPTIWTQVGNLINDIP---NMYAGLQKFIATLP----QRYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L +++ ++ G + + + + +I + + +FF +D + Sbjct: 126 NLQIVETVVTNAKNQALGLGESVVKGSLASL-VSLATLAVYLILVPLLVFFLLKDKEEMM 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + + I + G + + G V + + + L Sbjct: 185 SMASGILPK-NRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYSALLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + +IP GA V+I L G L + + + L P L Sbjct: 244 VAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGVIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + ++ G G+F L L+ +W + Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEENEP 353 >gi|325963817|ref|YP_004241723.1| permease [Arthrobacter phenanthrenivorans Sphe3] gi|323469904|gb|ADX73589.1| putative permease [Arthrobacter phenanthrenivorans Sphe3] Length = 436 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 111/320 (34%), Gaps = 11/320 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +++AL I P+ S+K + +++ ++ + L + ++ ++V Sbjct: 128 IVAALFIALGLEPVVGWLESRKIPRPAGI-LVSVTVLVSAVVGFFATLIPTIVEQVTQIV 186 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + P W+ D + L + + + L + + I Sbjct: 187 EQA----------PVWIRDFIDSDFFRSLDDQFGVRERVTEELDKFVNDPAAMGGIFGGV 236 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 FG + + +++ +F ++ + L + +S + + + + Sbjct: 237 VGFGSTVANGLFGTLIVLVLSLYFLAALPAMKKWGYRLAPRSRRHRVEALSEEITRSVGN 296 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G ++A+ + G+P + L + A++A IP + V + + + Sbjct: 297 YVIGQAVVALLNATFAFIVMSIVGIPFALLLAFVVALLAFIPLVGGMIAGVVVLLVSLTE 356 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A + L + P ++ + +P ++ G +G+LG I Sbjct: 357 GWQAAAVYGICYFSYLQFEAYFISPRIMQKAVAVPGAVAVISVIAGGSLLGVLGALIAIP 416 Query: 334 LMALIAVIWKESIMAIKENK 353 A + ++ +E + ++ Sbjct: 417 TAAAVLLLIREIYIVRQDQH 436 >gi|313618959|gb|EFR90805.1| membrane protein YdbI [Listeria innocua FSL S4-378] Length = 345 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 121/358 (33%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R + +I LY L+ +L I + + + + + + ++ Sbjct: 8 LQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + + ++ +LV + +E Sbjct: 68 LYVLIAGVIVFVFVKYIPVLADQINQLVKFGNSFLKT--------------DSNNEFINY 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S I+ G+ I + + G + ++ + ++ FF + Sbjct: 114 IVSLANQFDIMK---YTEQGVSMILTYLTNVGTVLMN----VFIALMLSLFFSLGKDHLI 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ + + + K+ IS Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEVNQPKDIISH 344 >gi|229825463|ref|ZP_04451532.1| hypothetical protein GCWU000182_00823 [Abiotrophia defectiva ATCC 49176] gi|229790026|gb|EEP26140.1| hypothetical protein GCWU000182_00823 [Abiotrophia defectiva ATCC 49176] Length = 396 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 117/345 (33%), Gaps = 21/345 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVPLLFL 81 PV+ I+ + +P+ S + + + ++ + + L Sbjct: 54 LKPVIIGFIMAYLLFPMLEKLESLLRKIKPLKKKKSVRGLAVALQWIIILVGLFIVVSLL 113 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + S+ ++ ++++ + K + +K +TF Sbjct: 114 VSVITKQARAANSEDIIEGIKTYA--NSINEL--YRELIDRLDKLNINSAEIKSSVDTFT 169 Query: 142 KTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA- 198 G + + D + +F +I +F D + + + + P Sbjct: 170 NNLGKYMLNLSSQLGNLAGNLKDGLATALFALIFSIYFLLDMPKLKKYWGRVLGIILPEK 229 Query: 199 ---YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + KV G I A G+V+ + + G+ + +G++ + +IP Sbjct: 230 VKTTLDTLIKDADKVFSGYIRGQAIDAFMVGVVVSVVFSIIGIQYAIVIGLLIGLGNLIP 289 Query: 256 GGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 PI ++++ I + + + + I I + P L+ + + + Sbjct: 290 YMGPIVGYSSIVIVGIATSDYKSMVIAAIALLIIQAIDGNLIYPKLLSTSVNIHPMIVII 349 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G GL+G+ + AL+ V W E ++ I E K N Sbjct: 350 SLTVGASIGGLVGMIVAVPTGALVKV-WFERLINIAEKKNVNKDN 393 >gi|254994787|ref|ZP_05276977.1| permease perM-like protein (perM) [Anaplasma marginale str. Mississippi] Length = 434 Score = 74.1 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 109/344 (31%), Gaps = 11/344 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-----TVSVMCLFI 75 V ++ ++ A ++ + P+ + S I + + +F+ Sbjct: 86 AVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLESIGLPRPVSSFAIIFSSVGVFAALLVFL 145 Query: 76 VPLL----FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 VP+ +++ + N + G M L +L Sbjct: 146 VPIAYSQTLALAKLLVDKLPFAGVEGIKNALLAYDMLRYDGVIGAMNPEALSPHNLFSGN 205 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + + G+ + ++ LF+ + + + Sbjct: 206 HVEFIKLLDGLYKNFIKVAVGVVQSGVGIGTIAAKVFITLLLLFYILGSWPIVVKNALLM 265 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + G T + + + + + G+ + LGVI+ IM Sbjct: 266 VPRHYLEGFSHCMSKIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLVLGVISGIM 325 Query: 252 AMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP PI + +L + + L + + + P L+ + L Sbjct: 326 TFIPYIGPILCALLGACLAILQDFSWTGTAAVILVFVVGNVVESNIITPVLLSKKLDLNP 385 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+V GLLG + + A+++V+ ++ K + Sbjct: 386 GWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLTHFAVEKYKHSN 429 >gi|219870889|ref|YP_002475264.1| putative permease, PerM family protein [Haemophilus parasuis SH0165] gi|219691093|gb|ACL32316.1| putative permease, PerM family protein [Haemophilus parasuis SH0165] Length = 354 Score = 74.1 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 108/338 (31%), Gaps = 13/338 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +PQ + I+ I ++YF P+L A++ + WPI +K + VI Sbjct: 15 DPQIVALLAILIIGFGTIYFFSDLLMPLLIAIVFAYLLEWPI-RFLTTKLKLPRMLSLVI 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + + + + + + + WL +P + Sbjct: 74 VLGGFISLSVFLFVVMLPSLWNQAVTFLKDLPSMFNL---LNAWLEALPEHYPELIDYAM 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + K TF + S G+ + + ++ FF +D Sbjct: 131 LDSLMATAKTKILTFGDSLLSFSFNSLVSLVGLGIYAFLVPLMV-----FFLLKDKTLFM 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ + I + G + + G+ + + + L Sbjct: 186 RSALRFMPK-NRHLATRVWGEMQLQIANYIRGKFLEILIVGVATYIIFLFFDLRYPLLLS 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V + ++P GA + V++ L + + L + ++D + PFL Sbjct: 245 VAVGLSVLVPYIGAVLVTIPVALVALFQFGLSPDFYYLLLAFVISQLLDGNLVVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 305 AVNLHPLTIIVAVIIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|163794619|ref|ZP_02188589.1| hypothetical protein BAL199_26706 [alpha proteobacterium BAL199] gi|159179892|gb|EDP64417.1| hypothetical protein BAL199_26706 [alpha proteobacterium BAL199] Length = 362 Score = 74.1 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 131/342 (38%), Gaps = 16/342 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + +L + P++ A ++ P ++ F+ ++ T LA A + + I+ L Sbjct: 30 IFVAALRLAQDVVIPIVGAAVMAVVLTP-FARFLMRRFMFPTSLAAFAAFILAFVVILSL 88 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 LF+ + + E +V ++ L I M A + W++ + SL S+ Sbjct: 89 LFVAVPTVQRLSEDFPSLVYRVEYK------LRSIALSMEAVKRWSETVEGLISLGQKSD 142 Query: 139 T--FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE-HL 195 L G + + S I+FM++ +FFF RD + + + L Sbjct: 143 GNHVLVREGGGAVGQLISS----TPKVIAQIVFMLVLVFFFVRDRRVLQRVIIRLAPTPQ 198 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ R+V S L + +I + G +A+++AG+P +A G A++ +P Sbjct: 199 TRFKAARVCRVVQNKAASYLLSVCVINLVLGAATATAFFIAGMPEPLAWGAAMAVLNFVP 258 Query: 256 GGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P+ VS L+I +I A I P ++ + L T Sbjct: 259 FIGPLILQIVSFLAGLVIYPSIEAALIPPAVLIALNLIESNFGMPLVMEKRFLMSPLATL 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G G G + L+ ++ E + + K K Sbjct: 319 VAIACGAWMWGTPGAVLAVPLVVMVTTGSSEWRLGRRSVKTK 360 >gi|260430970|ref|ZP_05784941.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414798|gb|EEX08057.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] Length = 357 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 107/312 (34%), Gaps = 14/312 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + I + P+ S S I TV+ + LF++ +L + + ++ +L Sbjct: 32 PFVIGGAIAYFLDPVADRLES-LGLSRVAATGIITVAGILLFVLMILMVVPALITQLIDL 90 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + S+ + L+ D + Sbjct: 91 IDIFPSLFSQLRDFIE---------RQFPSLLDDQSNTHQFLLSLSDTLQGKTGDILKSV 141 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + G L +I ++A+ + D + +++ L ++++ + V+ Sbjct: 142 MASVGSAVNVIVLLVIVPVVAV-YLLLDWDHMIARINDLLPRDHAPTIRRLAGEIDAVLA 200 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S GM + + G A L G+ + +G I ++ IP + +++I L + Sbjct: 201 SFVRGMGTVCLILGTYYAVALMLVGLQFGLVVGFIAGLVTFIPYLGALIGGSLAIGLALF 260 Query: 273 ---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 G+ + + AI + L P LVG + L + L G +G+ Sbjct: 261 QFWGDWTSIGLVAGIFAIGQVVEGNFLTPKLVGNSVGLHPVWLLLALSVFGALFGFVGML 320 Query: 330 IGPVLMALIAVI 341 I + A + V+ Sbjct: 321 IAVPVAASLGVL 332 >gi|225572907|ref|ZP_03781662.1| hypothetical protein RUMHYD_01098 [Blautia hydrogenotrophica DSM 10507] gi|225039720|gb|EEG49966.1| hypothetical protein RUMHYD_01098 [Blautia hydrogenotrophica DSM 10507] Length = 343 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 122/346 (35%), Gaps = 6/346 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ + I I+ + + ++ P L ++ +P K ++ Sbjct: 2 SLEVRRKICAIGIVIGVYLGFRYVVPVAVPFLIGWLLAVWVYPAGEWIERKIHLKKSWAG 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ LF++ L ++K + + G+ + + + Sbjct: 62 AVILVGLLTLFLLLLWKGGILLWEQIKLIFLNFHNLSDWGMRILDQCCQAAEQVTGIKKE 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ + S G IFL + + ++ F ++ S Sbjct: 122 VSRQFILTQAGQMQRNLMESVTPQSFLKLISEAGEIFL-VGMGFLITWLSGILFLQEMDS 180 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +++ E ++I+R + + + +I GL+ +WL G P ++ Sbjct: 181 VKRKVR---ESSVLRGVRRIARRLKETTITYLKAQLVIMGVIGLICTLGFWLMGSPYYLL 237 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G I+ +P G ++Y L+K A + + +V + L P L+G Sbjct: 238 FGAGLGILDALPVIGTGTFLYPAAVYFLLKKEFSVAVGCVILD-LVTSVVREFLEPKLIG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + + + G G G+ GP+ +++ + KE + Sbjct: 297 RRLGISPVIVLAAVYFGFYLYGPWGVLAGPLSLSVAYEVGKEWDIW 342 >gi|47570617|ref|ZP_00241232.1| membrane protein [Bacillus cereus G9241] gi|47552723|gb|EAL11159.1| membrane protein [Bacillus cereus G9241] Length = 181 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 66/179 (36%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 ++DG + + SL + +I + + + + G ++ I G Y + Sbjct: 1 MFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII 60 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P LG+I A +IP P A ++ + + + A + + I + Sbjct: 61 DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNII 120 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 121 SPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRSN 179 >gi|282854725|ref|ZP_06264060.1| putative membrane protein [Propionibacterium acnes J139] gi|282582307|gb|EFB87689.1| putative membrane protein [Propionibacterium acnes J139] Length = 433 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKK 55 E + G+ + I+ + + + + F AP+ L + T++PI++ + K Sbjct: 78 EVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHK 137 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + ++ + + + +L S IP Sbjct: 138 CPR-WISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSY-----------------IPQ 179 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 180 MEKIYTQLLHWSTQLGYSQEVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMI 239 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 240 FMVMDTPQMHDRLRMAGSR--KPVVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLI 297 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP G I ++ L K A + + ++ F++ Sbjct: 298 IGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVVVVVSYSVLNFVIQS 357 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 358 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 393 >gi|261415247|ref|YP_003248930.1| protein of unknown function UPF0118 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371703|gb|ACX74448.1| protein of unknown function UPF0118 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326974|gb|ADL26175.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 375 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 103/300 (34%), Gaps = 11/300 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G P +A +I + P+ K V+ + + + F + Sbjct: 30 LSGVLFPFFAAFLIAYIMDPLVCRLQIKFRYR-VIAVVVVLLGAAIIIGGCMYFFVPKVV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE----LWTKHLSHPQSLKILSETFLK 142 E++ L + + R ++ +P WAS W +SL + S Sbjct: 89 HEVQYLGTLISRIFTDSTWSDRIMTFLPADTWASVKTMISWNSIAEAMESLDVWSVVQTV 148 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ I S + + L F D I + + L + + Sbjct: 149 SDRILPGAWDILSKTSTIFMGVSSAAVVFMYLVFIMLDMHKIRKGIRRLIPRRYRREAGE 208 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG----GA 258 + K + + F +++A G++ + + G+P VA G+ + + MIP Sbjct: 209 FASSTDKFMGTYFRAQSMVAFTVGVLYAIGFSVMGLPMGVAFGLFSGALNMIPYMQLTTI 268 Query: 259 PISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P++ +Y L KG F A + + I D L P +VG + LP + L Sbjct: 269 PLALLLAVVYALDKGMPFWEVAIIILAIYLVVQIIQDFFLVPHIVGKSMNLPPVGILLSL 328 >gi|58584987|ref|YP_198560.1| permease [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419303|gb|AAW71318.1| Predicted permease [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 333 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 115/315 (36%), Gaps = 10/315 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLA-----VIATVSVMCLFIVPLLFLFYYGML 87 P L+++++ + P+ F + ++ + + FI+P++++ +L Sbjct: 4 PCLTSIVVAYLFNPLVIKFEKYGIPRLYSVIFITFLLLMVLILAVTFILPIIYVEIISIL 63 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 LVSKV N I L +I + +K+L+ S + + Sbjct: 64 NF--LVSKVSSLNPKVIQPVLELLNIKIDNDLFDHLSKNLAENYSDYVSYFINAFNIASN 121 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 FI + S + ++ + F+ RD I ++++ L + V Sbjct: 122 FITQMLSS-SFSLIHIVSLVVITPVMFFYILRDWPLIVEKVNKLIPIPYRKKAADYFSKV 180 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ + G + I + G+ +A+G+++ + IP P +T + Sbjct: 181 DFIMSNYLKGQANVCIVMTTFYSIGLSIIGLKHSIAIGILSGTLTFIPYIGPSLYTIIGF 240 Query: 268 YLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 F + + L I I L P LVG + + G+ +GL Sbjct: 241 LSAATQFSGWFESVAILLLFGIGQLIDTNILAPLLVGKKVHIHPAIIIIGITICASYLGL 300 Query: 326 LGLFIGPVLMALIAV 340 +G+ + ++A+ V Sbjct: 301 IGILLFVPIIAIFNV 315 >gi|255525857|ref|ZP_05392785.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296185100|ref|ZP_06853510.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|255510421|gb|EET86733.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296049934|gb|EFG89358.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 388 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 121/338 (35%), Gaps = 21/338 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA-----VIATVSVMCLFIVPLLF 80 LK FF AL+I + P S + E+ I + V L + Sbjct: 48 VLKPFFI----ALVIVYLLKPGVKSVENFLEKKKILKKPSSRRAIGILVVYALVTGIFVA 103 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSE 138 + + + VS V + G+ + +L + + +L + ++S P +L Sbjct: 104 VISGIYIMVGGKVSSNVTISNMGMFLTDYLKNSTLSVTSINEKLASLNISIPGNLNDKIA 163 Query: 139 TFLKTNGIDFIPRFAS------RFGMIFLDYCLSIIFMIIAL--FFFYRDGFSISQQLDS 190 + + F S G + ++++ I + F ++ D ++ L Sbjct: 164 EIVSSIQSYFSASIGSITNSVVSIGGNIASFFIAVVLSIYLIQDFEYFMDLWNKIFDLI- 222 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 G+ K+I IV G + A G++ + + + +G+I I Sbjct: 223 FGKSKVGNKLKEILNIVDDTFYRYIRGQLLEAGIVGVLSAIVLYFIKIDYALMIGIIAGI 282 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPF 309 MIP P+ T +++ + + + G + + VD L P +VG + L Sbjct: 283 CNMIPYIGPVVGTVLAVIMALLSGEPITALWAIIGMLVVQQVDNNLLAPKIVGDSVGLHP 342 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + T ++ G GL+G+ I A + + + Sbjct: 343 VFTMVAILVGGNVGGLIGMLIAVPAAASLKRLISKWYA 380 >gi|329944871|ref|ZP_08292898.1| hypothetical protein HMPREF9056_00781 [Actinomyces sp. oral taxon 170 str. F0386] gi|328529682|gb|EGF56578.1| hypothetical protein HMPREF9056_00781 [Actinomyces sp. oral taxon 170 str. F0386] Length = 437 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 118/344 (34%), Gaps = 33/344 (9%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I V LY +K FAP AL + T P+ S + AT +++ +F Sbjct: 32 LTIGAVGLYLIKDLFAPAFFALTLVVTVRPLVSWMTRHHVPR----VLAATTAILLIF-- 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + V Q +P++ +W + + + + Sbjct: 86 ---------TFVVLLFAALAVAVAQLVDTLPQY------APKFQAIWRQAETQLNGMGVD 130 Query: 137 SETFLKTNG----IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 T LK + A + M + + F D I + + Sbjct: 131 QSTVLKQVTNVLDTSRLVTVAQTILAQVTSASAMLSVMAMVVVFLMFDTAKIE--IRTAA 188 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ + +RS ++ T+ + ++ W VP + GV++ I Sbjct: 189 LNVLKPGMASALVSFCEAVRSYWMVSTVFGLIVAVINVLTLWYLDVPMAITWGVVSFITN 248 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + +I L+ + A + L + F++ ++P G + L Sbjct: 249 YIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYVVANFVIQSLVQPKFTGDAVGLNTTT 308 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TF L+ +G LG ++A+ ++ ++++ + + + Sbjct: 309 TFLCLLFWSTVIGALG-----TILAVPLTLFVKALLIDSDPRSR 347 >gi|300787453|ref|YP_003767744.1| hypothetical protein AMED_5588 [Amycolatopsis mediterranei U32] gi|299796967|gb|ADJ47342.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 389 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 103/313 (32%), Gaps = 14/313 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L PV AL++ P S KK A I V + + + F+ Sbjct: 52 LASVLVPVAVALLLAGLFSPAVSWLAGKKVPR-GLAAAIVLVGGIGVAGGVVTFVVISVT 110 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + M L+ +V + + WL P + +L + +L Sbjct: 111 VGMPALIDQVTAS---LTDLHTWLRTGPLHLSQVQLDEMLGNLTATLGRNKSA------- 160 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I A + + + + L FF G I + R Sbjct: 161 --IASGALTTAVTVGELLAEALLAVFCLIFFLAQGRVIWVFVLRAVPAGLRNRVDVAGRS 218 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + G +A+ + + + GVP L + + A +P + A++ Sbjct: 219 GFTTLAHYIRGTAAVALVDAAGISLGLVIIGVPLAAPLSALVFLGAFVPVIGSVIAGAIA 278 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + L+ ++ A + + + L+P L+G ++L L L G+ T G+ Sbjct: 279 VLVALVANGVWAAVIVLAVVVGVMQLESHVLQPLLLGRAVRLHPLAVVLALTIGLVTAGI 338 Query: 326 LGLFIGPVLMALI 338 +G + L+A+ Sbjct: 339 VGALLAVPLLAVF 351 >gi|294010650|ref|YP_003544110.1| putative permease [Sphingobium japonicum UT26S] gi|292673980|dbj|BAI95498.1| putative permease [Sphingobium japonicum UT26S] Length = 365 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 105/350 (30%), Gaps = 15/350 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + W M I + L L ++ AL++ + I V Sbjct: 26 KRAGVWFAMGISIALLVLLAQPIMLIMGALVLATMMDGGTRLLGRLMPIGRGWRLAIILV 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + V+ + +WL + + Sbjct: 86 AALTFLVYTFYLTGSSLAAQAQAMR---VIVETQVNRIGQWLQQLGV-----------TT 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L L + + R + G + S + M++ F + + + Sbjct: 132 MPGDLGPEDFKSLAQQAMSSLGRVTAAVGT-MVGAVTSGVMMLVLAIFIAIEPKIYERGV 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + I+ + +R G I EG W GVP LG++T Sbjct: 191 AWMLPMDRRDRFYAIADRMGWTLRRLMFGRLIGMAVEGGGTWLLLWAGGVPMAGLLGILT 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P I + + + + F + + P + L Sbjct: 251 GLFAFLPNIGSIISGVLIVLVGFSAGVDAGLYAFGVYLAVQIVDGYLIVPMVAKRATDLA 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++GLF+ ++A+I V +E A++ + ++ Sbjct: 311 PALVLAAQILFGALFGIMGLFLADPIVAMIKVYLEERSKALEAENGRSAA 360 >gi|56964203|ref|YP_175934.1| hypothetical protein ABC2438 [Bacillus clausii KSM-K16] gi|56910446|dbj|BAD64973.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 362 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 128/356 (35%), Gaps = 10/356 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + +YF F P+L AL+ P K ++ L V Sbjct: 7 KKIFLIVVIAAAGLFVYFNLSAFMPILLALLTAMVFEPFVKFLQKKMKQEKRLLPVTIVF 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW----LSDIPGGMWASELWT 124 LL++ ++E + + Q+ + ++ +SD + Sbjct: 67 LSFLFVSGVLLYITVRYLIE--SIYGWTLQLPQYAFEIQQFADKLISDFTDTLDRIPQGA 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ Q L + + I A+ + + II LF F D + Sbjct: 125 AIVAELQRLSETAVDTVLGFTATVITTIAAWL-QSIPNLLFVTLVYIITLFLFSLDLPRL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L + + + R + KV + I++IG L + S + + Sbjct: 184 LSNTFNLFKDETSQKLQFVFRRMGKVFLGYWKAQFILSIGVFLACYISLLFIAPSSALIM 243 Query: 245 GVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ ++ +IP G + + ++I GN L + A+ L I+ + + P ++G Sbjct: 244 SILIWVVDIIPLYVGPALILVPWGLVVIILGNTAMGIQLMVL-ALVLLILRRIIEPKVLG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 I L LPT + G G++GL GP + + + + + +E + Sbjct: 303 DSIGLNALPTVLSMYFGFVFFGVMGLIFGPFVYIAVRSAIEAGLFRLNAPEEPTAK 358 >gi|306821732|ref|ZP_07455328.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550201|gb|EFM38196.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 450 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 100/332 (30%), Gaps = 14/332 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + A I+ I + S+ + + + + L +FY Sbjct: 39 LFTPFITGICIAFILNIPMQKIEKTINKLFGWKSSRAFSLFLTIIAFIMV--LTLIFYMI 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL------WTKHLSHPQSLKILSET 139 + E+ ++ + P + + K S+ Sbjct: 97 IPEIVNSFVEIRNGLPTVVDNFVKFMKTPDNHIIKTMSNIGLDFDKMYSNVTDFFKNFSL 156 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQLDSLGEHLF 196 +N + I + ++ L +IF + L G S+ L ++ Sbjct: 157 LDASNALQSIFSATTNVFSSVMNVFLGLIFAVYILSQKEVLLSQGHSL---LKAIFPDKR 213 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 R+V G A+ + ++ L +P V++ + + +++P Sbjct: 214 TKKIVSFLRLVSSSFSKFIAGQGTEAVILCFLFLASMTLFHIPKAVSIATMIGLFSLVPI 273 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P + ++ + + + I + P +VG + LP + + Sbjct: 274 VGPFIAATYGVLSILIVAPIKSLWFVVLFLVLQQIEGNLIYPRVVGKSVGLPGVWVLLAI 333 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G G+ G+ + M+++ + + + Sbjct: 334 TVGGNFAGITGMIMAVPTMSIVYNLVTSFVRS 365 >gi|298530977|ref|ZP_07018378.1| protein of unknown function UPF0118 [Desulfonatronospira thiodismutans ASO3-1] gi|298509000|gb|EFI32905.1| protein of unknown function UPF0118 [Desulfonatronospira thiodismutans ASO3-1] Length = 364 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 115/357 (32%), Gaps = 20/357 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N Q ++ ++ +YF P + L+I + ++K ++ Sbjct: 14 NQQVVILVGLLLFFFGVVYFFGQMLLPFFAGLVIAYLLDG-MVKMMTKYGIPRLLAVILV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASEL 122 + M + +L + ++ +LV + + A H + +P + E+ Sbjct: 73 FLGFMLIMFFSFFWLVPMLIKQVTQLVQQLPSMISEAQMHLLQLPERYPHLVSQEQIQEV 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L I + + + + +I + + +FFF +D Sbjct: 133 ISALRTEVAQL------------GQQILSISVASVVGLITILVYLIIVPLLVFFFLKDKE 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ V + I + G T I + + G+ V Sbjct: 181 MLLAWFTRFLPR-ERSLAVQVWEDVNRQISNYIRGKTWEIIIVWGATFAVFSFFGLQYSV 239 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVDKTLRPFL 300 L + + +IP GA + +++ + + + AI + L P L Sbjct: 240 LLSLAVGLSVLIPYIGAAVVTVPIALVAYFQWGFGSEFVWILVAYAIIQALDGNVLAPLL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +G + + + + G G+F L L+ + + A K+ I Sbjct: 300 LGEVVNIHPVGIVAAIFVFGGLWGFWGVFFAIPLATLVQAVIRAWPRAEDVKKQAIE 356 >gi|149180329|ref|ZP_01858834.1| hypothetical protein BSG1_04900 [Bacillus sp. SG-1] gi|148852521|gb|EDL66666.1| hypothetical protein BSG1_04900 [Bacillus sp. SG-1] Length = 391 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 127/369 (34%), Gaps = 22/369 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKG---------------FFAPVLSALIIGFTSWP 46 R ++ + + W+I +++VS+ F+ F P+L L + F P Sbjct: 18 RGIAVSKKSLQFWLIQILLIVSIVFVSTKISFLFHPLTIFITTLFFPILITLFLYFLLNP 77 Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK-ELVSKVVLANQHGIP 105 I + K V+A + + L I L+ + + + + + Sbjct: 78 IVNFIQRYKVPR-----VVAILIIYVLIIGLLVLAIGNIVPTITKQFTALANELPTYAAK 132 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 ++ ++ E + ++ + F F + G + + + Sbjct: 133 TFQYFENLSRSAEFKEFMNEQQDLLETAQERLVAFANDLPTLITGSFQNLLG-LVANIAI 191 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ + + LF+ ++DG + + I + + + G + + Sbjct: 192 ILVTVPLLLFYMFKDGHKFPIAVSKFFPSEYRKEAITILKETGSTLAAYIQGQVTVGLFV 251 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ Y + + + L + A+ +IP P+ A ++ + + + A + L Sbjct: 252 GILSLIGYLIIDLRFALVLAITVAVTNIIPYVGPLIGGAPAVIVGLFESPTKALLVLLIL 311 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I + L P ++G + L+ G+LG+ + A+I + Sbjct: 312 VIAQQVEGNILSPLILGKTLDTHPATIIILLLAAGNLAGVLGMILAVPTYAVIKTVIINL 371 Query: 346 IMAIKENKE 354 + +K KE Sbjct: 372 VKFLKARKE 380 >gi|307151174|ref|YP_003886558.1| hypothetical protein Cyan7822_1280 [Cyanothece sp. PCC 7822] gi|306981402|gb|ADN13283.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 370 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 121/342 (35%), Gaps = 15/342 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ + + +L+ ++A ++ F +PI + + S + + + + + + Sbjct: 27 LLFLLIGYLEPLVTIFITATLLAFLLDFPI--RLLELRGISRVWAVTLVFLIALVILAIL 84 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L L + ++ +L++ + G L + + Sbjct: 85 ALVLIPLILQQLSDLIAVLPQWIDTGTENIDNLRKWAIAQRLPININQVIGQIAEKLTTV 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L T G++F+ +I+F+++ F G +I + S Sbjct: 145 VQSLSTQGLNFLLGAIGSI--------FNILFVLVLTVFLVFTGQNIWDGIFSWIPE--- 193 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++ ++ F I+A L + + VP V GV + ++IP Sbjct: 194 PWNVELRNLIRDKFERYFASQAILAGILSLSQTVVFLILQVPYAVLFGVTIGLTSLIPYA 253 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + VSI L ++ N + + I I D+ + P L+GG L + L Sbjct: 254 SAFTILLVSIILSLE-NWVLGLKVLIAAIIVGQINDQVITPRLMGGITGLNPVWLILALF 312 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + G+LGL + L ++I + E + + Sbjct: 313 IGGKFAGILGLLLAVPLASVIKSATDNLRYRLTHPNESMIAQ 354 >gi|163816686|ref|ZP_02208049.1| hypothetical protein COPEUT_02876 [Coprococcus eutactus ATCC 27759] gi|158447943|gb|EDP24938.1| hypothetical protein COPEUT_02876 [Coprococcus eutactus ATCC 27759] Length = 550 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 99/310 (31%), Gaps = 25/310 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE----------------SSTFLAVIATVSVMCLF 74 FAP++ +I F P+ F S T ++ T+ + + Sbjct: 53 FAPIIVGAVIAFLMNPVLVFFDRLFHTIFQDKVITDKKKLFKVSRTLSVILTTIVFLGII 112 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + +K+LV + + + +++ + + + + Sbjct: 113 TGVVWLVVPQLYDSIKQLVGNMDNYYSNLQNMVENINE--KFQKLNIPEDELNKYMNTAY 170 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + L T + + + G + + + I+A + + ++ + + Sbjct: 171 LKLQDMLNTKIMPNVDKIVVNIGSGVFSGLKFLYNFLIGIVASIYVMANKEYLASRGKKI 230 Query: 192 GEHLFPAYWKKI----SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +F + ++ G + ++ G+++ + +P V + VI Sbjct: 231 IYAVFKVKNANNILDGLSEMYRIFGQFINGKILDSLIIGMIMFIVSTILNLPYAVLISVI 290 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP PI ++++ + + L L I L P ++G L Sbjct: 291 VGVTNVIPFFGPIIGAIPCFFIVLIADPIKSLVLLLVILILQQFDGNILGPKIIGDTTGL 350 Query: 308 PFLPTFFGLV 317 ++ Sbjct: 351 SSFWVLTAVI 360 >gi|313123584|ref|YP_004033843.1| hypothetical protein LDBND_0821 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280147|gb|ADQ60866.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 357 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 114/354 (32%), Gaps = 27/354 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAV 64 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 10 KNNIHLRRATVLVMIILALYYVRTMMNTILLTFIFTYLIVHLVRFVQGKFKHVSDKLIVA 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L L + + ++ ++ V+ Q W Sbjct: 70 LTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQTN----------------DVGWL 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H + + +K++ F +S + ++ FF+ + + Sbjct: 114 MTQLHKYVSEKTISSQVKSSLTALTAAL-----KGFGSVTMSFVMALVLSFFYTIELKEM 168 Query: 185 SQQLDSLGEH----LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S + R +IAI + + +P Sbjct: 169 QTFSQSFLKSDLFGWLFEDIAYFGRKFTNTFGVVLEAQFLIAICNTALTIVCLAIMKMPQ 228 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ALG++ I +++P G IS +S+ G I + + + A+ + L P Sbjct: 229 IFALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPK 288 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +LP TF L+ G G GL + + I + K+ K Sbjct: 289 FMSSKTELPIFYTFVVLLFGEHFFGTWGLIVSVPIFTFFLDILGVKNINSKQEK 342 >gi|188581278|ref|YP_001924723.1| hypothetical protein Mpop_2025 [Methylobacterium populi BJ001] gi|179344776|gb|ACB80188.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 370 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 107/310 (34%), Gaps = 14/310 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ +++ LY L+ P ++ L + + P+ + AT+ ++ F+ Sbjct: 11 ILAVLVFLLYELREVMLPFVAGLALAYLLDPLADRLERLGLGR-----LAATLLILAGFV 65 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V L+ + + ++ +V + + + + G + + + L+ Sbjct: 66 VGLVVVLIIVVPLAAGQIASLVNSLPTMVGKLQSILVERAGPLLQRIGGAEVVN--ELQS 123 Query: 136 LSETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + G F+ S + + ++ + F+ D + LD Sbjct: 124 SVGTLVGQGGTWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIATLDGWVP 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++++ + + G +++ + G +L G+ V +G+I+ + Sbjct: 184 PRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMISGFLTF 243 Query: 254 IPG-----GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP G +S + G+ + + F+ + P LVG + L Sbjct: 244 IPYVGTLTGFMLSVGVALVQWWPTGDWLHIGLTVGVFLVGQFLEGNVISPKLVGDSVGLH 303 Query: 309 FLPTFFGLVG 318 + F L+ Sbjct: 304 PVWLMFALLA 313 >gi|149183675|ref|ZP_01862089.1| hypothetical protein BSG1_18470 [Bacillus sp. SG-1] gi|148848623|gb|EDL62859.1| hypothetical protein BSG1_18470 [Bacillus sp. SG-1] Length = 345 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 119/343 (34%), Gaps = 26/343 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIG-----------FTSWPIYSSFISKKEESS 59 + ++ I + Y L + PVLS LI+ + P+ Sbjct: 1 MAITLLAVITVYVFYLLYPVWHPVLSVLIMAMIPFLLGGFITYLLHPVVEKLFKAGIHRG 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++++ ++I+ L Y + ++ ++ ++ W Sbjct: 61 --------IAILLIYILFFGGLGYAVYKGIPVIIHQLKDLAENAPLYTEQYQR-----WL 107 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + P ++ ET ++ + F + ++ L + F+ Sbjct: 108 DYIQRQTSTWPDGIQHELETRIERFEEWLNGVVAFILSGVLKIMNSLLLFAIVPFISFYL 167 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + + SL + + + + + G ++ + G + ++WL G Sbjct: 168 LKDFPKVKKAATSLTPKKWRNSAGSFFKDLDESLGGYIRGQLLVCLLIGSLAALSFWLFG 227 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + LG+I I +IP P+ + + + + + F+ L Sbjct: 228 MKYPLLLGIIVGITNVIPYFGPVIGAVPAAIVASTISNEMIIKVIVIVFALQFLEGNILS 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 P +VG + + L L+ G G+LGL + L+A++ V Sbjct: 288 PLIVGKSLHMHPLFIMGALIIGGEVGGVLGLIVAVPLLAMLKV 330 >gi|154483895|ref|ZP_02026343.1| hypothetical protein EUBVEN_01600 [Eubacterium ventriosum ATCC 27560] gi|149735386|gb|EDM51272.1| hypothetical protein EUBVEN_01600 [Eubacterium ventriosum ATCC 27560] Length = 415 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 125/348 (35%), Gaps = 22/348 (6%) Query: 24 LYFLKGFFAPVLSALIIG-FTSWPIYSSFISKKEESSTFLAVIAT-----VSVMCLFIVP 77 L + F +L A +I SW ++ F + LA + V V+ +V Sbjct: 48 LATMSPFLIGILIAFLINPLVSWLHHTVFEKWLYVKNNVLAHLLAITFSYVLVIVFLVVG 107 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++++ + + +L+ K+ I ++ + L + +++ Sbjct: 108 IIYIVPEIIDSLTQLLDKLPEWGDALISYINTIAAKHPELQLDYLIKSISNADSTIQEFL 167 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD----GFSISQQLDSLGE 193 F+ + G+ + + + I II + D I + + ++ + Sbjct: 168 GGFISKLTTTIVVT-----GVSIIKFVFNFIVAIIVSIYLLIDKKMQSRGIKRTIYAIFD 222 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL---AGVPS----HVALGV 246 + + + + F G I ++ G + + + GVP + +G+ Sbjct: 223 EERADKICAVIKRSIHIFSNFFDGKMIDSLIIGALTFVSMMIISLFGVPGFSNCALLVGI 282 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I MIP P SI LL ++ +A + I + + P ++G Sbjct: 283 VVGITNMIPYFGPFLGGIPSILLLCIYSLNSALIFAILIIIIQQLDGNLIGPKILGNSTG 342 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L F + G G+ G+ +G +A+IA + ++ + E K Sbjct: 343 LRPLWIIFAITLGGWIAGIPGMLLGVPCVAVIAGLLEDWVNERLEAKN 390 >gi|126650477|ref|ZP_01722700.1| putative permease [Bacillus sp. B14905] gi|126592633|gb|EAZ86632.1| putative permease [Bacillus sp. B14905] Length = 365 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 95/294 (32%), Gaps = 9/294 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY- 84 LK F P+L + + + PI +K + +++ V + ++ Sbjct: 38 ILKAIFIPLLLGGVFYYVTEPIQRFLEKRKFPR--WASILTIVFGLIGIAGVFGWIIGNP 95 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ +LV + + + L+D + + + + + Sbjct: 96 IAEQVNKLVKNAPMISSSISTSIQQLTDY-VLLNKDNFPQQVNDVIEKMANSVQDVAMVA 154 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 FI S + L + F+ F +D + + + KK Sbjct: 155 SKGFISFLQSIVSVSLLAVLIPFFFI-----FMLKDHEKFAPSIYKYFSGERQQWVKKTL 209 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V+RS G I+ L++ Y + G+ + L + M MIP P Sbjct: 210 SEIDDVLRSYIQGQLQISFLLALIMYVGYLIIGLEYSLLLVIFAFFMNMIPFIGPWIAFT 269 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + + + + + + I + P ++G + + L ++ Sbjct: 270 PALIVAVIQDPILVVWVSVVTLVAQQIDSNFITPNVMGKSLDIHPLTVITIILA 323 >gi|325264760|ref|ZP_08131489.1| sporulation integral membrane protein YtvI [Clostridium sp. D5] gi|324030052|gb|EGB91338.1| sporulation integral membrane protein YtvI [Clostridium sp. D5] Length = 372 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 110/316 (34%), Gaps = 4/316 (1%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 GFF P + II + P+ + + + + + + V+ L ++ L F E Sbjct: 33 GFFMPFVIGWIISAIATPVVNWLEKRLKIVKKLGSALIVIVVLALIVLLLYFAISKVSAE 92 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLKTNGI 146 + +LV R + G+ E + + L T Sbjct: 93 IGDLVKNFPELYAQLEEGLREIGSTLSGVFSKLPEGIQNGWNAVVANLDQYMGELVTKLS 152 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 A F Y ++ I +++ +FF + Q L + + Sbjct: 153 QPTVTAAGNFAKSLPSYLIAFIVAMMSAYFFTVQREEVIQWLKKVSPPSVEKRMSLVMDN 212 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 + + F I L+L + + GV + + + A + +P G + Sbjct: 213 LKYAVGGYFKAQFKIMGIVFLILFAGLAMFGVHYAILIAFLIAFLDFLPFFGTGTAMIPW 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y L+ G+ L + AI +V + L+P LVG + L L T L G + + Sbjct: 273 ALYKLLTGDYKMTAALLVIYAITQ-LVRQLLQPKLVGDSMGLNPLVTLLLLYIGYKVSSV 331 Query: 326 LGLFIGPVLMALIAVI 341 LGL + + ++ + Sbjct: 332 LGLILAVPIGMVLINM 347 >gi|325684228|gb|EGD26404.1| membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 357 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 115/354 (32%), Gaps = 27/354 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAV 64 N + R ++ +I+++LY+++ +L + I + + K + S + Sbjct: 10 KNNIHLRRTTVLVMIILALYYVRAMMNTILLSFIFTYLIVHLVRFVQGKFKHVSDKLIVA 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L L + + ++ ++ V+ Q W Sbjct: 70 LTYLLIVVLLYFGLRYYVPVLVKQVTKMTKSVINYYQTN----------------DVGWL 113 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H + + +K++ F +S + ++ FF+ + + Sbjct: 114 MTQLHKYVSEKTISSQVKSSLTALTAAL-----KGFGSVTMSFVMALVLSFFYTIELKEM 168 Query: 185 SQQLDSLGEH----LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S + R +IA+ + + +P Sbjct: 169 QTFSQSFLKSDLFGWLFEDIAYFGRKFTNTFGVVLEAQFLIAVCNTALTIVCLAIMKMPQ 228 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ALG++ I +++P G IS +S+ G I + + + A+ + L P Sbjct: 229 IFALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPK 288 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +LP TF L+ G G GL + + I + K+ K Sbjct: 289 FMSSKTELPIFYTFVVLLFGEHFFGTWGLIVSVPIFTFFLDILGVKNINSKQEK 342 >gi|126463195|ref|YP_001044309.1| hypothetical protein Rsph17029_2435 [Rhodobacter sphaeroides ATCC 17029] gi|126104859|gb|ABN77537.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 358 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 14/326 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + I + PI A+I+ LL + + + Sbjct: 30 ILPFIVGGAIAYFLDPIADRLERAGLSRVAATALISVAM--------LLVVVLLVLSVIP 81 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LVS++ + R L +L + + Q+L + +T + G + Sbjct: 82 TLVSQLTALIDAAPTIFRQLHSFLL-DHFPQLSDETSTARQTLLSIGDTIKERGGE--VA 138 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ + ++ + + F+ D + ++DS ++++R + +V Sbjct: 139 NTLLTSAYGVINAMIFMVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRRLAREIDEV 198 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G + + G A G+ + +G I + IP + A++I L Sbjct: 199 LAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAIGLA 258 Query: 271 IK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + G+ + + A+ F+ + P LVGG + L L F L G +G Sbjct: 259 LFQFWGDWLSIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFGFVG 318 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 + + + A I V+ + I ++ Sbjct: 319 MLVAVPVAAAIGVLARFGIRQYTSSR 344 >gi|258404397|ref|YP_003197139.1| hypothetical protein Dret_0259 [Desulfohalobium retbaense DSM 5692] gi|257796624|gb|ACV67561.1| protein of unknown function UPF0118 [Desulfohalobium retbaense DSM 5692] Length = 356 Score = 73.7 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 113/358 (31%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ ++ +I+ ++ + + APVL+++++ + + + E Sbjct: 9 RRHFSDPQVVILALILISCILLIMTVGDLIAPVLASVVLAY----LLEGLVRFLENRRVP 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + L +++V R L +P Sbjct: 65 RMLAVCLVFLIFVFFLFFLVLGLLPLLSQQIVQFFQELPSMLAAGQRELMRLPERYPKFI 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L +LK T + + + + +I + I +FFF +D Sbjct: 125 TEDQILDVVAALKSQL-----TGLGQRVLSISLASVRSLFNLLIYMILVPIMVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + ++I V + I + G + + + + Sbjct: 180 SKIINYIKMFMPKDY-TLTRRIWHDVDRQIGNFVRGKVWEILIVWGAAYGLFLIIDLNYA 238 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPF 299 + L + I ++P GA + V++ + + G L I+D L P Sbjct: 239 ILLSFLVGISVIVPYVGATVMTLPVALVAYFQWGWGQEFIYAIIGYTILQILDGNLLVPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ + L + ++ G G+F L L+ I A + Sbjct: 299 LLSEVVNLHPVAIIVAILFFGGIWGFWGVFFAIPLATLVQSIINAWPRAGQPQPPAPK 356 >gi|297155054|gb|ADI04766.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 341 Score = 73.7 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 104/313 (33%), Gaps = 15/313 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 V L++ P+ +A + + + + L + E Sbjct: 37 VAVFLGLVVTALLRPLADLLERLVP--RPLAVAVALIGSIVVVLGLLALVGSVAAAEAGR 94 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L+ + + RWL P + L Q L TF+ T+ I R Sbjct: 95 LLGEFRGGVGR---ISRWLEQPPFRIKHGTL--------QGLHERISTFVATHRGTLISR 143 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A ++ + FF G + + + W + +R Sbjct: 144 -ALSGANRVVEALTGAALALFCSVFFIYGGDRMWLWFHAQLPETARSPWDRAARAAWSTF 202 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLL 270 G+ I+A ++G A +L VP + L V+ IP GAPI+ ++ L Sbjct: 203 AGYTRGIIIVAASNATLVGIALFLLRVPLALPLTVLVFFATFIPLIGAPIALAVATVVAL 262 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 A + + + I L P ++ ++L + ++GG G++G + Sbjct: 263 AGRGPVIAAAVLVLIVVIGQIEGHVLHPLVMSWAVQLHPVVVAISVIGGSLVAGVIGAIV 322 Query: 331 GPVLMALIAVIWK 343 +++++ + + Sbjct: 323 AVPMVSVVWSVVR 335 >gi|153811071|ref|ZP_01963739.1| hypothetical protein RUMOBE_01462 [Ruminococcus obeum ATCC 29174] gi|149832959|gb|EDM88042.1| hypothetical protein RUMOBE_01462 [Ruminococcus obeum ATCC 29174] Length = 273 Score = 73.7 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 87/232 (37%), Gaps = 3/232 (1%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALF 175 +L + +P + L + + S G I + ++ F LF Sbjct: 40 IMKLVDQVQFNPDQAIKWGISLLGNGAGNMMNTTMSAVGSIVSGLATFFIAFSFACYVLF 99 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + I + + + + KI + + + G + A+ G + + Sbjct: 100 QKEKLHVQIRKVVFAFLPKKKADAFLKICSLTYRTFANFLAGQCLEAVILGCMFVVILSI 159 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P + +GV+ A A+IP AV +L+ N A + + I Sbjct: 160 LGMPYALLIGVLIAFTALIPIFGAFIGCAVGSFLIFMVNPKQAILFIIVFLVLQQIEGNL 219 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P +VG + LP + + G MG++G+ + L+++ I+++S + Sbjct: 220 IYPHVVGESVGLPSIWVLAAVTIGGNLMGIVGMLVFIPLLSVFYTIFRDSYI 271 >gi|187777381|ref|ZP_02993854.1| hypothetical protein CLOSPO_00937 [Clostridium sporogenes ATCC 15579] gi|187774309|gb|EDU38111.1| hypothetical protein CLOSPO_00937 [Clostridium sporogenes ATCC 15579] Length = 351 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 120/333 (36%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ ++ FL + P + A + + I K + ++ + I T+ Sbjct: 11 LILFFIIYTISFLIFFKTLPYTLPFVLAFLFALALKKPANYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINSLVHEVIDFGKNTQTYLYSHEDQ--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTN---GIDFIPRFASRFGMIFLDYCLS-------IIFMIIALFFFYR 179 P S+ E + + + I SR F+ S I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITSRIVSSFIGLLTSIPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++ + + + + +I K++ L + +++ + Sbjct: 183 DITKHDNKISKIIFNEHSSKFPQIYLESKKMLSGYILSYLTLIGITFFETLIVFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +I AI +P G + ++ I++L+ N L + + + I+ + L Sbjct: 243 YSIMFSIIAAIADFLPILGIGSIYVPLALIHILVYKNYVVGIGLLI-SYVAVSIIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPVSVLAAIFIGLKANGISGMFF 334 >gi|33152348|ref|NP_873701.1| putative permease [Haemophilus ducreyi 35000HP] gi|33148571|gb|AAP96090.1| putative permease [Haemophilus ducreyi 35000HP] Length = 351 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 129/349 (36%), Gaps = 21/349 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 R+ +PQ I I+ + LYF P+L A++ + WPI K Sbjct: 10 RKKFNDPQAIALLGILLVGFGILYFFSDLLMPLLVAIVFAYLLEWPIKLLSYHLKMPR-- 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + + V+ FI FLF + + + + V+ + + W+ +P Sbjct: 68 ---LFSLILVLGSFISLCTFLFIFLLPNLWNQAVTFIRDLPSMFNLLNAWIQALPEHYPE 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S SLKI +F ++ + S G+ + + ++ FF + Sbjct: 125 LIDYAMLDSLMNSLKIKILSFGESLLTLSVNSIISLVGLGIYAFLVPLMV-----FFLLK 179 Query: 180 DGFSISQ---QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + ++ L W ++ + + IR L + I+AI V + + Sbjct: 180 DKTLFIRSFVKILPKNRRLVTNVWFEMQQQIANYIRGKVLEILIVAI----VTYAIFLFF 235 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-K 294 G+ + L V + +IP GA + V++ L++ I L + ++D Sbjct: 236 GLRYPLLLSVAVGLSVLIPYIGAVLVTIPVALIALLQFGISPEFYYLLLAFVISQLLDGN 295 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + PFL + L L ++ G G+F L L+ + K Sbjct: 296 LIVPFLFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVIK 344 >gi|313836726|gb|EFS74440.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314929868|gb|EFS93699.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314972295|gb|EFT16392.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] Length = 404 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 104/336 (30%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKK 55 E N G+ + I+ + + + + L AP+ L + T++PI++ + K Sbjct: 49 EAATNKHGLPKLTIVLLTVAAAWLGLSFLHELSSVIAPLFFGLNLLITAYPIHTWLVKHK 108 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + + + + + +L S IP Sbjct: 109 CPR-WISATAAGTTVIVVLAAGVAGMVWSVAAMINQLQSY-----------------IPQ 150 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 151 MEKIYTQLLHWSTQLGYSQEVITDKLKKIDPQQVMSVITSVASDTTSIVTMIIVILTGMI 210 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 211 FMVMDTPQMHDRLRMAGNRKPDVVLA--LESFSSGIRKYWLVTTVFGLIVALFDWAALLI 268 Query: 236 AGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP I ++ L K A + + + F++ Sbjct: 269 IGVPLAGVWALFSFLTNYIPNIGFIVGVIPPALLALFKDGWVAAVAVVVSYSALNFVIQS 328 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 329 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 364 >gi|331003207|ref|ZP_08326714.1| hypothetical protein HMPREF0491_01576 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412860|gb|EGG92240.1| hypothetical protein HMPREF0491_01576 [Lachnospiraceae oral taxon 107 str. F0167] Length = 371 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 126/329 (38%), Gaps = 10/329 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A + A II Y + KK + + +A + F++ ++ L + Sbjct: 40 LVPFVAGAIMAYIINILMD-FYEDLLLKKFHNKKIIRTVAIALSIITFVLVIVLLLGLII 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE----TFLK 142 ++ ++++ ++ + +SDI + +++ + +++ I S Sbjct: 99 PQLIKIITSIMYV--KPDYINSLISDIGNNKFINDILSSMNIDIKNINIASYLTRLIQNV 156 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +G+ + F + +S+ ++ + D I+ Q D L P+ + Sbjct: 157 MSGVGNVLTGVISGISGFFNTVISLFMAVVFAIYILVDKERIALQGDKLLRAFMPSQRET 216 Query: 203 I---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + ++ ++ F+ AI G++L +A +P ++ ++ + A+IP Sbjct: 217 VIDTLQVFNTSFKNYFISQVKEAIILGVLLYIVMLIARLPYASSISILVGVTALIPVIGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + +++ ++ + + I + + P +VG + LP + + G Sbjct: 277 YAGLFIGALMILTKSLQSMVIFIILHTIVQQFENNVIYPRVVGSSVGLPGMWVIVAVALG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G+ G+F+ + A + I K Sbjct: 337 GSMGGIFGVFVAVPVAASLYFILKRETEK 365 >gi|291618363|ref|YP_003521105.1| PerM [Pantoea ananatis LMG 20103] gi|291153393|gb|ADD77977.1| PerM [Pantoea ananatis LMG 20103] gi|327394756|dbj|BAK12178.1| putative permease PerM [Pantoea ananatis AJ13355] Length = 356 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 15/305 (4%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + + ++ I V + +V +L + + L +P L+ Sbjct: 59 LQRIGCTRSWATSIVLVLFAGILLVLVLIVAPVAWQQGINLTR----------DLPNMLN 108 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIF 169 + L + ++ E + D + +++ + + + ++ Sbjct: 109 KLYLYAAGLPRRFPALVDAGIIDVIVENLRGRLSGVGDSLVKYSLASLVGLMTLMIYLVL 168 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + +FF +D + + + ++ + + + I + G + + G+ Sbjct: 169 VPLMVFFLLKDKEQMLNAVRRVLPRNRGLAG-EVWQEMNQQITNYIRGKVLEMVVVGIAS 227 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAI 287 A+ G+ + L V+ + +IP GA + V + L G L + Sbjct: 228 WLAFMFLGLNYSLLLAVLVGVSVLIPYIGAMLVTIPVIGVGLFQWGLDSEFWTLLTVYLV 287 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + L P L + L L +V G G+F L L+ + Sbjct: 288 IQALDGNVLVPILFSEAVNLHPLVIILSVVIFGGMWGFWGVFFAIPLATLVKAVVHAWPE 347 Query: 348 AIKEN 352 A + Sbjct: 348 APLDE 352 >gi|227872737|ref|ZP_03991061.1| possible permease [Oribacterium sinus F0268] gi|227841415|gb|EEJ51721.1| possible permease [Oribacterium sinus F0268] Length = 404 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 113/344 (32%), Gaps = 20/344 (5%) Query: 31 FAPVLSALIIGFTSWPIYSS------------FISKKEESSTFLAVIATVSVMCLFIVPL 78 P++ ++ + P+Y+ F K ++ ST + +ATV + + Sbjct: 47 LMPIIYGAVLAYLMSPVYNFVVKISEVLLVKLFRKKSKKQSTASSFLATVCSLLFLTLIG 106 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L + E+ + + + + I + + + + + L S S Sbjct: 107 GSLVSLLIPELTKSIYNLYMTLPDAINRSYERIQTLLTNYPEARGYVEDLYTEISAFFSS 166 Query: 138 ETFLKTNGIDFIPRFASRF-------GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + A+ F + + + +I M+ L + L + Sbjct: 167 KPESAQTILGHLQNIAAFFRDGIWNTFTVVKNILIGLIVMVYLLNLKKTLKLQFRKLLFA 226 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + V K+ LG I ++ G++ + +P + + VI + Sbjct: 227 IFSKEKAKGIIEELQYVHKMFGGFILGKIIDSVIIGILTFFVLSIMKMPYTLLVSVIIGV 286 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P P I L++ + A + + + P ++G L Sbjct: 287 TNVVPFFGPFVGAIPCIILIMLSSPLQALYFAIAILAIQQLDGNVIGPKILGDSTGLSSF 346 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F ++ G +G+ I L A+I + E K+ Sbjct: 347 WVLFSIILFGGLFGFVGMIIAVPLWAVILNSIRRYANKRLEKKQ 390 >gi|269128813|ref|YP_003302183.1| hypothetical protein Tcur_4624 [Thermomonospora curvata DSM 43183] gi|268313771|gb|ACZ00146.1| protein of unknown function UPF0118 [Thermomonospora curvata DSM 43183] Length = 393 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 103/291 (35%), Gaps = 17/291 (5%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + A+ + ++ +P + + E S + V +WL Sbjct: 85 LRRLGTPPWLAALAGILVLLGAIALPFTLITNRVVNE---WSSLRRQTEEGLDRVRQWLL 141 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + P + ++ + ++L+ + ++ ++ L + L Sbjct: 142 EGPLSVSERQINSTVDGLIRTLREALPDPVGGATAAAQGATSALLALVLLFFLL------ 195 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 +DG +++ S + + + + + G ++A+ +G+ +G Sbjct: 196 -------KDGEKMARWALSQLPRRHRGWVAVAAVEGWRTLVAYIRGTFLVAVIDGVGIGL 248 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 A + GVP + LG++T I A IP AV++ + + N L L + + Sbjct: 249 ALVIIGVPLALPLGLLTFIAAFIPIVGATVAGAVAVLVALVSNGLGDALLTLGAVLLVQQ 308 Query: 292 VD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+P + G ++L + G G+ G + + A+ + Sbjct: 309 AEGNLLQPVIQGRSLRLHPAVILIAVTAGTLLGGIAGAVVAVPVTAITYRV 359 >gi|300772600|ref|ZP_07082470.1| permease [Sphingobacterium spiritivorum ATCC 33861] gi|300760903|gb|EFK57729.1| permease [Sphingobacterium spiritivorum ATCC 33861] Length = 353 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 123/351 (35%), Gaps = 23/351 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+ + P I I+ I++ Y + P++ ++ P+ + K Sbjct: 1 MRKFISLPFYIKLACILISIVILGYLARIGDTIIVPLILGILFAMLLTPMSTLLEKKLRF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T ++ + LF L Y ++ L P + I G+ Sbjct: 61 PRTLAGIV----CIVLFFGGLATGLYLLASQLSMLQEDW----------PAFKHQILDGV 106 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIAL 174 + W H Q + ++ L + G + + ++F + Sbjct: 107 EVVQDWVNHQFGIQYNEQMN--LLNKTASKSVDSGTLILGTALMSLSSIAIFLVFTFLYT 164 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF I + L L +I V V++ +G+ + + ++ A Sbjct: 165 FFILIYRGHIVRFLLYLNAKEDHPVVLEIVAEVQYVVKRYLIGLLLQMLIVTTLVYIALA 224 Query: 235 LAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + GV + L +IT + ++P G S V++ + +F+ +I I Sbjct: 225 IIGVKYSLLLAIITGVFNVLPYIGIFSSMFIVALITFATSTFSHVLFVFVAMSIIHMIDS 284 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P +VG +K+ L +V G G+ G+F+ L+A++ ++ Sbjct: 285 NVIVPKVVGSKVKINSLFAMMAIVCGELIWGISGMFLAIPLLAIVKIVMDR 335 >gi|124268111|ref|YP_001022115.1| transport protein [Methylibium petroleiphilum PM1] gi|124260886|gb|ABM95880.1| transport protein [Methylibium petroleiphilum PM1] Length = 405 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 111/343 (32%), Gaps = 21/343 (6%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L L L+ F P+L L+ + PI + + S AV+ + Sbjct: 53 LAVLAVLACLVALRWASAVFIPLLLGLMFSYALSPIVDRMVRWRIPRSLAAAVLLLAILA 112 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-----MWASELWTKH 126 Y + EL+ + A Q R + P A + Sbjct: 113 G-----AGSTAYSLGDDASELIESLPAAAQKLRQAVRAARNEPTSKMETMQKAVTQLEQA 167 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII---FMIIALFFFYRDGFS 183 S + L I + +F G S Sbjct: 168 AEEAASSAAGQRGVQRVQIEPRKFSIRDYLWSSTLGLAWLIGQATVVCFITYFLIASGNS 227 Query: 184 ISQQLDSLGEHLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ + F + + + I+ L +I+ G+ A+ G+ Sbjct: 228 FRRKMVKIAGPTFAQRRVTVEALDEITEQIQRYLLVQLLISALVGVATWLAFLWIGLEHA 287 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 G++ A++ ++P G+ ++ ++ G + A + + I + P+ Sbjct: 288 AVWGIVAAVLNLVPYIGSIAVTVGSALVAFLQFGTLDMALVVGGVSLVLHCISGYLITPW 347 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L ++ + F G++ G+ GL +G P+LMA+ AV Sbjct: 348 LTSRTSRMSPVVVFVGVLAWGWLWGIWGLLLGVPILMAVKAVC 390 >gi|119476473|ref|ZP_01616824.1| membrane protein, PerM family [marine gamma proteobacterium HTCC2143] gi|119450337|gb|EAW31572.1| membrane protein, PerM family [marine gamma proteobacterium HTCC2143] Length = 357 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 107/338 (31%), Gaps = 18/338 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALII-GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +++ L ++ A ++ G + S F + T V L + Sbjct: 29 LVVLMTMGNVLGPVITSIILAFMMQGVITQLTKRRVPRWLAISVAFSIFVGTFFVALLVV 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL + EL + Q + +P + + + Sbjct: 89 LPLAW--NQMTNLFNELPGMLSKWQQLMLVLPEQYPSFISETQIQDWILLAKAELGQV-- 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + F+ + + ++ + I +FFF +D I S H Sbjct: 145 ----------GQVVVSFSISSIPNLIGLLIYLVLVPILVFFFLKDHLLIVAWFKSFLPHE 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 P K I + + + + G I + G++ A+ + G+ LG++ + +IP Sbjct: 195 RPMLTK-IWHEMDEQVANYVRGKAIEIVIVGVISYIAFVILGLNYAALLGLLVGLSVVIP 253 Query: 256 -GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 GA + +++ + + L A+ + L P L + L Sbjct: 254 YIGAAVVTVPIALIAYFQWGWGSDFLTLLGVYAVIQGLDGNVLVPLLFSEAVNLHPTAII 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ GL G+F L LI + + + Sbjct: 314 LAVLVFGGFWGLWGVFFAIPLATLIKAVLNAWPSSRHD 351 >gi|253581604|ref|ZP_04858829.1| permease [Fusobacterium varium ATCC 27725] gi|251836674|gb|EES65209.1| permease [Fusobacterium varium ATCC 27725] Length = 374 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 106/326 (32%), Gaps = 8/326 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+ P++ AL I P+ S ++ + I V V+ + + Sbjct: 39 GYLIPMIYALFISIFLEPLVSKIENRFKLKRWVSVSIVIVLVIIGVAGFVGLILPQLGKS 98 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 KEL +K+ + + ++ + + EL + + N +F Sbjct: 99 FKELYNKLPYMQEQ---LGDFIKRVLDYLKEKELLVIGEKQIEENIVNLLKRNIGNLQEF 155 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA----YWKKIS 204 + F D + L+++ + Y Sbjct: 156 GISVLLNIMWWTVALS-KFFIGFFLAVFILLDKEYFVKFLNNILTIILGKEKGIYMSDFL 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 V+ + G I + G V + GVP + ++ I MIP I A Sbjct: 215 NQSRNVLLNYVWGRIIASAFVGAVTFIVLFFTGVPYALLSSLMIGIGNMIPYVGSIVAGA 274 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+I+L+I LF+ + + + P +V + + ++ G MG Sbjct: 275 VAIFLVILAEPSKIIYLFIAMMVGQAVDGWIVGPRIVSETVGMSTFWVIVAVLIGGSLMG 334 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 +G+F G ++ ++++ + I Sbjct: 335 PVGMFFGVPAFGIMKLVYEIQVKKID 360 >gi|124007643|ref|ZP_01692347.1| putative permease [Microscilla marina ATCC 23134] gi|123986941|gb|EAY26706.1| putative permease [Microscilla marina ATCC 23134] Length = 379 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 110/320 (34%), Gaps = 15/320 (4%) Query: 10 GIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++R I ++ + +L P A ++ + P+ K + ++V+ Sbjct: 13 RVIRTAIWVAVIWGFFKALQYLSDILIPFAIAALLAYLINPLVIFLQEKVRIRNRVISVL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGM-LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASEL 122 ++ V+ + L + + ++ + V Q + IP +W + L Sbjct: 73 LSLIVVFGLLTGLALILIPLVTKDISHMAEIVKGLAQDPQLDMKAQEYIPPSVWKEVNTL 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 H ++ K + I F + L + + +++ L F D Sbjct: 133 LNSDFFHTDKFANMAIDAAKKVLPNVIGLFNNVL--HLLLSIMGLAIILLYLVFILLDYN 190 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I Q L + K +S K + S F T+IA G++ + + +P V Sbjct: 191 KIMVQWTDLLPEQYHHTIKDVSTNFKKAMGSYFRAQTVIASLVGILFAIGFSIIDLPMAV 250 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK------GNIFNATCLFLWGAIELFIVDKTL 296 G+ ++ ++P I+F +++ L+ + AI I D L Sbjct: 251 VFGLFVGLLNLVPYLQNIAFIPAALFALVHSLDTGENFWIMMLLVLAIFAIVQLIQDALL 310 Query: 297 RPFLVGGPIKLPFLPTFFGL 316 P ++G I L L Sbjct: 311 TPKIMGDAIGLNPAVMLLSL 330 >gi|59712528|ref|YP_205304.1| inner membrane protein [Vibrio fischeri ES114] gi|197336366|ref|YP_002156749.1| transporter [Vibrio fischeri MJ11] gi|59480629|gb|AAW86416.1| predicted inner membrane protein [Vibrio fischeri ES114] gi|197317856|gb|ACH67303.1| transporter [Vibrio fischeri MJ11] Length = 354 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 124/340 (36%), Gaps = 14/340 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ + +++YF AP+L A+++ + WP+ +++ ++ Sbjct: 15 DPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAK--LTRIGLPRVLSVML 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ V + +LS +P Sbjct: 73 VIILFISLMLLAVFGLVPTIWTQVGNLINDVPSMFNG---LNSFLSSLPERYPEFIQPQS 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +++++ ++ + S + +I + + +FF +D + Sbjct: 130 IETLLETIRVKVLGMGESIVKGSLSSLVS-----LAALGVYLILVPLLVFFLLKDKDEMV 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +L K+ + + I + G + + G V +++ + + L Sbjct: 185 GTMSNLLPK-NRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYALLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA ++I L + + L L AI + L P L Sbjct: 244 VMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G G+F L L+ +WK Sbjct: 304 AVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWK 343 >gi|24374447|ref|NP_718490.1| hypothetical protein SO_2920 [Shewanella oneidensis MR-1] gi|24349024|gb|AAN55934.1|AE015731_4 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 368 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 108/328 (32%), Gaps = 23/328 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + IIL + P + + I P + +LAVI + + L Sbjct: 19 FVVIILAGIKAASPIVVPFVLSCFIAVICNPAIGLMTKYRV--PKWLAVILLMCFIVLMG 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + E + + + W H +++I Sbjct: 77 LWLASLVGSSINEFSKQLPQYRNQLVEQFS-----------------WVLHKLQALNIQI 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 E L + + ++ +I+ + F + S+ ++L L Sbjct: 120 SKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEASSLPKKL-HLALDD 178 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++I R + V + + ++++ GL++G GV + VI + IP Sbjct: 179 PDMRLQQIDRFLQSVNQYMVIKT-LVSLATGLIVGVGLAFIGVDYALLWAVIAFLFNYIP 237 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A + ++ + P +G + L L F Sbjct: 238 NIGSIIAAIPAVLLAFIQLGPAAAGGTTMLYIGANMVMGNVVEPKFMGRGLGLSTLVVFL 297 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ M + + Sbjct: 298 SLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|254381927|ref|ZP_04997290.1| integral membrane protein [Streptomyces sp. Mg1] gi|194340835|gb|EDX21801.1| integral membrane protein [Streptomyces sp. Mg1] Length = 436 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 102/308 (33%), Gaps = 21/308 (6%) Query: 17 MFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ L+ L + ++AL++ P + + + Sbjct: 80 LLLLAGMLWVLMKVISEVRLVVLAFVAALLVTALLQPFVVRL-RRLGLPRGLATAVTAIL 138 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + M + +L +V + WL D P + ++ Sbjct: 139 GFVVIGLVGWFVVWQVMENLDDLSDRVRDGINE---LKLWLLDSPFHVTEKQI------- 188 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + TN + I + + ++ ++ + + F DG I + Sbjct: 189 -NDIAKNLTDTIGTNTEE-ITSAGLQGVTVLVEVLTGMLLAMFSTLFLLYDGKRIWNWVL 246 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + G ++A+ + + +G + V V L V Sbjct: 247 GLVPAPARPGVAGAGPRAWRTLTAYVRGTVLVALIDAVFIGLGLYFLDVTMAVPLAVFIF 306 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP GA IS + L+ +F A + + I L+PF++G +++ Sbjct: 307 LFAFIPLVGAVISGALAVVVALVTQGVFTALSVLAVVLLVQQIEGHVLQPFILGRAVRVH 366 Query: 309 FLPTFFGL 316 L + Sbjct: 367 PLAVVLSV 374 >gi|254520064|ref|ZP_05132120.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913813|gb|EEH99014.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 388 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 108/304 (35%), Gaps = 11/304 (3%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K + + + ++ + + + FL + + LV+ + + ++++I Sbjct: 81 KLKSKRGLAILFSYITTFFIISMFVKFLLPQLIDSVVGLVNDIPSYITNTT---NFVNEI 137 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + + +++ L + + TN I + F + + L II + Sbjct: 138 IMKLNIEDQYSQVLIDNFNSLVNYIIRFATNLIPALGGFLASVASSIWNVILGIIVSV-- 195 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + D + + LFP + K+ +G I ++ G++ Sbjct: 196 --YLLIDKEKLCALSKKITYGLFPESYADEIIKLVDRSNYTFGRFLVGKIIDSLIIGVLT 253 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + +P + + VI I +IP P S +++ + A L Sbjct: 254 FIILTIFKMPYTILVSVIVGITNIIPFFGPFIGAIPSFIIILFVSPVQALWFLLIILFIQ 313 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + P ++G I + F ++ + +G++G+ IG L A+ I KE I + Sbjct: 314 QLDGNVIGPKILGDSIGISAFWILFSILVAGKLLGIVGMIIGVPLFAIFYSIVKEFIESK 373 Query: 350 KENK 353 K Sbjct: 374 LRKK 377 >gi|126335091|ref|XP_001363838.1| PREDICTED: similar to likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Monodelphis domestica] Length = 1098 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS++ + LF+ + + + SL P I + V + IR Sbjct: 725 GTALLNFVLSLVIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAIR 784 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 785 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAIPAVLDLWL 844 Query: 272 K-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G A L ++ + + VD + + GG T + GG +GL G I Sbjct: 845 TQGEGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 901 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 902 GPILLCILVV 911 >gi|146312618|ref|YP_001177692.1| hypothetical protein Ent638_2977 [Enterobacter sp. 638] gi|145319494|gb|ABP61641.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 353 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 97/296 (32%), Gaps = 11/296 (3%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K S + + I + + + ++ + + L+ + + + + Sbjct: 59 LEKIGCSRRWASSIVLILFVGILLLMSFVVLPIAWQQGINLIRDMPGMLNK---LSDFSA 115 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +P A + ++++ T D + +++ + L + ++ + Sbjct: 116 TLPRRYPALMDAGIIDAMAENMRARIMTM-----GDSVVKYSLASLVGLLTLAVYLVLVP 170 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + +FF +D + + + ++ + + + I + G + I G+ Sbjct: 171 LMVFFLVKDKEQMLNAVRRILPRNRGLAG-QVWKEMNQQITNYIRGKVLEMIVVGVATWI 229 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATCLFLWGAIEL 289 + + G+ + L V+ +IP GA + V + L G F I Sbjct: 230 GFVIFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGLGTEFWSCFAVYLIIQ 289 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L P L + L L +V G G+F L LI + Sbjct: 290 GLDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAW 345 >gi|55379912|ref|YP_137762.1| hypothetical protein rrnAC3369 [Haloarcula marismortui ATCC 43049] gi|55232637|gb|AAV48056.1| unknown [Haloarcula marismortui ATCC 43049] Length = 368 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 123/355 (34%), Gaps = 33/355 (9%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + ++ + + +V F A + ++ + +++ Y+S + + Sbjct: 2 YMDEKRFVVALFGLAVAVVVGVLAYQFIAALTVSVFLYYSTRRYYTSLRRLRLPARVRAV 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ + L ++ + + ++E ++ V++ L + V W Sbjct: 62 VVMASLAIPLLLL-VSYAAVLLIIEARQFVTQYALVDVAATHV----------SWLDGAE 110 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + L ++ +DF+ A + + L++ I ++ DG Sbjct: 111 SVPDLTVEGLYSAYQSGQLKPFVDFLSENAMVLTSVASQFFLNLFITTIVTYYLLVDGRR 170 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY--------WL 235 I L + A ++ V + + + G + + L+ +A+ Sbjct: 171 IRGWLLRFDD---GAIIREYLEAVDEELEAVLFGNLLNVLAISLIAIAAFTGYNVVAPAA 227 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAV----SIYLLIKGNIFNATCLFLWGAIELF 290 VP G +T I ++IP G I + + ++ +++ G + + I + Sbjct: 228 VEVPYPTLAGALTGIASLIPVVGMKIIYLPLTGITALPVVLDGQSSLLAYVLGFLLIAVV 287 Query: 291 IVDKT----LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +VD LRP L G G +G GLF P+L+ + Sbjct: 288 VVDTIPDLLLRPLLSGEST--HVGLLMLAYTLGPVVLGFYGLFFAPILLVVGMTF 340 >gi|28209877|ref|NP_780821.1| hypothetical protein CTC00106 [Clostridium tetani E88] gi|28202312|gb|AAO34758.1| conserved membrane protein [Clostridium tetani E88] Length = 351 Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 109/305 (35%), Gaps = 5/305 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P + A I K ++ + I T+ + I L F + E Sbjct: 31 YSLPFVLAFIFSLILKKPTEFLTKKFSIKNSLSSFITTLIFFTIIIFLLYFSVTSIVKEG 90 Query: 90 KELVSKVV-LANQHGIPVPRWLSDI-PGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +L + + + +L ++ K +S+ + + Sbjct: 91 IDLGKNTQIYLSNNSENIKTFLKNLEKYYYNLDPDILKTISNNLLTMLSKLSNYTVVITT 150 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + I F +I+ +FF +D S +L S+ + I Sbjct: 151 KLVQITISLLSYIPYIFMLIFFTLISTYFFTKDLSSAKNKLFSIIPNDKSDKISNIFNES 210 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 K++ + L II + + + + V + L +I AI ++P G + ++ Sbjct: 211 KKLLVNYALSYLIIILITFVETLIGFLVLRVNYAIILSIIAAIFDILPILGIGSVYIPLA 270 Query: 267 IY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L IK + F A + +W + + I+ + L P +V + + + + G++ G+ Sbjct: 271 LVNLFIKKDYFTAIGVLIWY-LVVTIIRQILEPKIVSSSLGMHPISILAAIFIGLKAAGI 329 Query: 326 LGLFI 330 G+F Sbjct: 330 TGMFF 334 >gi|309810430|ref|ZP_07704260.1| putative membrane protein [Dermacoccus sp. Ellin185] gi|308435613|gb|EFP59415.1| putative membrane protein [Dermacoccus sp. Ellin185] Length = 379 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 122/362 (33%), Gaps = 23/362 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFF---------APVLSALIIGFTSWPIYSSFI 52 RE + + W + ++ +++ L F+ ++ ++ PI S + Sbjct: 10 REAVPYGVRVAAWWSVCLLAIAVGVLAFFWGVTRLGVVTVSFVTGVMFAALLAPIVSWLV 69 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + +T AVIA + + F+ E ++ LA Q WL D Sbjct: 70 RRGVGRTT-SAVIAFFVGVGSAAGLIAFVVAQIDDSSGEFARQLTLAEQGAR---HWLVD 125 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 P + + T L + D + A+ G++ +++ + Sbjct: 126 GPLKIDE--------TSASRYTTDLGTTLSNHTADIVGWAAAHVGIVTGGLS-ALLLTLF 176 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F D SI + + L + + + + ++A+ + Sbjct: 177 CALFLLADDGSIWRWIVRLLPRGAHNHVDLAGAAAWRTLVVYMRSLVLLALLNAAAMLPV 236 Query: 233 YWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 W A VP V L V+ + ++IP G ++ + + + A L + + + Sbjct: 237 LWFADVPLAVPLTVVIFLGSLIPLVGVLLAAALMFAIAFVGNGLVTALVLVAILTVLVQL 296 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + P ++G + L + G+ G G G F L+A++ + K E Sbjct: 297 LGNLVNPLILGRFVDLHPVVILIGVSAGTLLGGAFGAFTAVPLIAVVNNMVKVMRSYHLE 356 Query: 352 NK 353 Sbjct: 357 EH 358 >gi|158422562|ref|YP_001523854.1| putative permease [Azorhizobium caulinodans ORS 571] gi|158329451|dbj|BAF86936.1| putative permease [Azorhizobium caulinodans ORS 571] Length = 364 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 118/335 (35%), Gaps = 19/335 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++++++ L+ P + I + P+ S+ A+ ++ + +V Sbjct: 14 LVVLILAMWVLREILLPFVVGTAIAYFLNPLVERL-SRLGIGRMPAALFMIGLLLLVVVV 72 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLK 134 LL + ++ E + +P +++ + E + Sbjct: 73 LLLVVLPIMSGQLYEFIQN----------MPSYVTRLQRLVTEENKEWVDQIFGTRLPDI 122 Query: 135 ILSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + L + G+ ++ S L ++ + F+ D S+ + +DS Sbjct: 123 QKSLSDLMSQGVSYLLGLLSSLWSGGQALLSVFALVVVTPVVAFYVLCDWNSMVENVDSW 182 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +++ R + + G ++ + G A +AG+ + +G+++ + Sbjct: 183 IPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSGFI 242 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLP 308 IP G+ +++ A ++G + I L P LVG I + Sbjct: 243 TFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIGVH 302 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F L G +GL + L A V+ + Sbjct: 303 PVWLMFALFAFGYLFGFVGLLLAVPLTAATGVLVR 337 >gi|325479810|gb|EGC82897.1| putative membrane protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 408 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 44/372 (11%), Positives = 124/372 (33%), Gaps = 23/372 (6%) Query: 6 LNPQGIMRWMIMFIILVSLY--------FLKGF--FAPVLSALIIGFTSWPIYSSFISKK 55 N + +I ++ + + F++ + PV+ L+I F + F +K Sbjct: 11 KNKNILKVTIISILVFFAFWYKKDVSEGFVRTYAVIRPVIYGLVIAFIINLPMNFFENKV 70 Query: 56 EES-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VP 107 + ++ + +F + + + E+ +S +V + + Sbjct: 71 FGRFIDRSKHKHLASALSLILSWIVFFGIITIIMTVFIPELVNAISSLVENIPIFMDKLI 130 Query: 108 RWL--SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLD 162 +L + + A + + ++L FL I S + Sbjct: 131 EYLNNQRLFKEVSAEIIARLNKLDVENLTKEITAFLNGKNIGIWNKTSNILSSVSSWLIA 190 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +F + + ++ L + + + ++++ + Sbjct: 191 VIMGFVFSLYVSANKKELQTNANKILLANFKEDKVNHINYVAKLSYDSFSKFLETKLLSC 250 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + GL+ + +P + ++ +IP PI T V + L+ + + Sbjct: 251 LSLGLICFIGMKILKLPMAGMISILVGAFDIIPYFGPIIATGVGMILIFIQSPAQSLIFL 310 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + +K + P ++G LP + F + G G+ G+ + + ++ + Sbjct: 311 IFVLSIQQVQEKIIYPLVIGKHQGLPAIWIFLSVFLGAGLFGIAGMIMSMPVATILYTLI 370 Query: 343 KESIMAIKENKE 354 +++ + KE Sbjct: 371 QDNTKRKLKIKE 382 >gi|168333789|ref|ZP_02692034.1| hypothetical protein Epulo_02740 [Epulopiscium sp. 'N.t. morphotype B'] Length = 345 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 119/333 (35%), Gaps = 10/333 (3%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R + + II +Y + + + I+ + + + F++ ++ + T M Sbjct: 4 RIVNVIIIFGLIYIFVEYIFGLFAPFILAYLIAFLLNPFVNILKKRFNIPRGMGTXLCML 63 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L L + + +K+L+S+VV ++ L + SE W L + Sbjct: 64 TI---LSALIWGLVEVIKKLISEVVALSESFPAYKAELEA--KLIEISETWAIPLPAGFT 118 Query: 133 LKILSETFLKTNGIDFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L D + + A +I M+IA FF +D + + + + Sbjct: 119 SIDDILVELLNWFSDSLAQIVPLAYGTIKFVPSTLFFMIVMLIATFFITKDFYFLRRFMY 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + K+ + I+ G + + + L V A Sbjct: 179 AQVPDNIRPHIDKMQIGLKTAFGGYVKTQFILMGGTFCICFTGLMVLKRDYAFLLSVCIA 238 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I P G+ +Y LI GN L I + I+ + L P ++ G I + Sbjct: 239 IFDAFPVLGSGAFLITWGVYHLILGNWSLGLSLLSIYGIIV-IMRQVLEPRVLAGQIGMY 297 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G++ G +G+F+GP++ + + Sbjct: 298 ALVTVMSIYIGLQVFGAIGVFVGPMIAVSVQTL 330 >gi|292491897|ref|YP_003527336.1| hypothetical protein Nhal_1828 [Nitrosococcus halophilus Nc4] gi|292491913|ref|YP_003527352.1| hypothetical protein Nhal_1847 [Nitrosococcus halophilus Nc4] gi|291580492|gb|ADE14949.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] gi|291580508|gb|ADE14965.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 371 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 111/341 (32%), Gaps = 12/341 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 NPQ +++ + ++ F+ APVL++L+I + I ++ + Sbjct: 14 NPQVAGLALLLVVSFATVIFMGHILAPVLASLVIAYLLEGIVGYLERRRCPR-WLAVPLV 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V+ M F + + ++ + + G L +P + Sbjct: 73 FVAFMVAFFGDIFGVIPLLSQQVTQFFQLLPTMIARG---HELLLSLPEHYPDLFSEAQV 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + ++ + + + S + + ++ + + +FFF +D + + Sbjct: 130 NNLVSAIHVEVAQLGQEVLSWSLASVTS-----LITLGMYLVLVPLLVFFFLKDKDRLIE 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S ++ V I + G I + V +++ G+ + L V Sbjct: 185 WCKSYLPQ-ERKLIAEVWGEVDFQIANYVRGKCIEILIVWAVSFITFYVLGLRFSMLLSV 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + +IP GA V+ + G + I F+ L L Sbjct: 244 LMGLSVLIPYIGAMAITLLVAFVAYFQWGLSTEFAEVLGACVIIQFLDGNVLATLLFAEV 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + +V GL GLF L +I + K Sbjct: 304 VDLHPVAVIVAIVVFGGVWGLWGLFFAIPLATIIQAVLKAW 344 >gi|239626409|ref|ZP_04669440.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516555|gb|EEQ56421.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 415 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 120/353 (33%), Gaps = 33/353 (9%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIAT 67 ++ +L + P++ ++ + PIY+ + T Sbjct: 35 LVSGALGKIASILMPIIYGAVLAYLMLPIYNKTRAYTTLKLSKAIKDQSIVDRLAKAAGT 94 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + LF + E+ + ++ + + +++++ MW ++++ + Sbjct: 95 LVSLVVLVAIVAGLFRMIIPEIYNSIIRLQES------IGEYINNL--TMWMNKMFEDNQ 146 Query: 128 SHPQSLKILSET----FLKTNGIDFIPRFASRFGM------IFLDYCLSIIFMIIALFFF 177 + + E F K +P + G + +I+ +I + +F Sbjct: 147 DFEKFVMPYYEQGVSEFQKWLTEKLVPNMSMIIGQLSTGLLSVVTVVKNILIGVIVMVYF 206 Query: 178 YRDGFSISQQLDSLGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +++ Q + + R + G + ++ G++ A Sbjct: 207 LNIKDTLAAQSKKIVYSILKLKDANRLVSEVRFAHGIFGGFITGKLLDSLIIGIMCFFAL 266 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +P + + VI + +IP P S +L++ + ++ I Sbjct: 267 QFMDMPYVLLISVIIGVTNVIPFFGPFIGAVPSAFLILMISPMKCLYFLIFILILQQFDG 326 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L P ++G LP F ++ +G +G+ IG A+I + + Sbjct: 327 NILGPKILGDSTGLPSFWVLFSILLFGGLLGFVGMIIGVPAFAVIYRLVSAYV 379 >gi|300718851|ref|YP_003743654.1| hypothetical protein EbC_42760 [Erwinia billingiae Eb661] gi|299064687|emb|CAX61807.1| Putative membrane protein [Erwinia billingiae Eb661] Length = 357 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 128/344 (37%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +++ + +++ + +IL + P L AL + P+ + + K Sbjct: 4 LQQEKIGQNMLLKMATLIVILAGIKAASEILVPFLMALFLAIVLNPLVTYLMRK--GVRR 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA+ + + + I L+ + + E ++ ++ +H + + Sbjct: 62 GLAISLVMLGVLIVIGLLVAMVAGSVNEFSDIYPQIRAQMEHKLGI-------------- 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +H + + + +E + + + A+ F +++ +++ + F + Sbjct: 108 ---VQHFAATFHINLSTERMAERLDPNSLMNVATTVLSQFSGAMTNVVLLLMTVVFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L + P K + T+I++ G + + +L GV Sbjct: 165 VHHLPYKLRFAL--VNPKIRIAGLHKALKGVTHYLALKTLISLITGAAVWLSLFLLGVKF 222 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ ++ IP G I+ I L+ +F+A + + + + L P Sbjct: 223 SLLWGVVAFVLNFIPNIGPIIAGIPPLIQALLLNTVFDAAMVAVLFTVIHMVFGNMLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L ++ ++ + Sbjct: 283 VMGKGLGLSSLVVFLSLIFWGWLLGPVGMLLSVPLTSVCKILME 326 >gi|284040446|ref|YP_003390376.1| hypothetical protein Slin_5612 [Spirosoma linguale DSM 74] gi|283819739|gb|ADB41577.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 383 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 116/332 (34%), Gaps = 16/332 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + II+ L+ L+G P++ A++ +P+ + LA++ + + Sbjct: 20 LLSLVIIVYGLHELQGLLIPLVFAILFSVLLFPLVQRLEN--WGVPRILAIVICLLLALG 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + E++ + V I + +D +L + Sbjct: 78 ALTALFWGVSVQISSFSEVIPQFVKRGSQYIDSIQTFAD-------EQLNIDRKRQVAEI 130 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K L G + ++ + + + L YRD + + Sbjct: 131 KKYLNQALAEGGTILTTTLLATTSILTNLFLVLLFAFFFLL---YRD--FFRSFFYKVFD 185 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + +V++ G+ ++ + G ++ + GV V G A + + Sbjct: 186 DTRRSKIDDVMSGIYEVVKDYLAGLVLVILIIGTLMTVGLLILGVDYAVFFGFFGACLVL 245 Query: 254 IP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + S + L+ + N A + + + P++VG + + L Sbjct: 246 IPYFGISMGSLLPAAYTLVTQDNPLKALGVIGVFLFVQTLEGNFITPYIVGSKVSINPLA 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ GL GL + + A+I VI+ Sbjct: 306 AIVVLILWENVWGLPGLILALPMTAIIKVIFD 337 >gi|218515641|ref|ZP_03512481.1| hypothetical protein Retl8_19092 [Rhizobium etli 8C-3] Length = 132 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L I ++ ++ G + V ++ A + AI + I+D L+P L+ Sbjct: 4 LTFIVFVLCLMQLGPALVLLPVILWAWFSWPTPIALVFTVV-AIPIMIIDNILKPILMAR 62 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P G++GG + GLLGLF+GPV++++ + + Sbjct: 63 GLSTPMPVILIGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 104 >gi|123239764|emb|CAM24770.1| likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Mus musculus] Length = 471 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 241 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 300 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 301 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 360 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 361 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 417 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 418 GPILLCILVV 427 >gi|82703757|ref|YP_413323.1| hypothetical protein Nmul_A2644 [Nitrosospira multiformis ATCC 25196] gi|82411822|gb|ABB75931.1| Protein of unknown function UPF0118 [Nitrosospira multiformis ATCC 25196] Length = 393 Score = 73.3 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 104/318 (32%), Gaps = 16/318 (5%) Query: 11 IMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + W++ FI ++ +LY + F P+L +++ +T P+ F + + + Sbjct: 41 MALWILAFIAVIAALYLGRAFLVPLLFGILVSYTLSPVVDWFERYRIPR-----ALGAIC 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW------ASELW 123 V+ + + ++ + + ++ + L D A EL Sbjct: 96 VLGVLVGGTSWMALSLSADAAIMAEQLPETARKLRQSLNILRDGNWSTLRHFQEAADELG 155 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + ++ ++ + + + +++ +F G Sbjct: 156 RVAVDAGLESADRAVIIKESENNAWLRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSH 215 Query: 184 ISQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++L +I V I+ L M I ++ A+ + G+ Sbjct: 216 FRRKLVRFVGPRLSQKKDAVRILEEVDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHP 275 Query: 242 VALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 GV ++ IP G ++ +L G++ A L + +V L + Sbjct: 276 AVWGVAAGVLHFIPYLGTVGVALACGVAGMLQFGSLSQAFLLVAVFLLISGVVGMMLTTW 335 Query: 300 LVGGPIKLPFLPTFFGLV 317 L G ++ F L+ Sbjct: 336 LQGRFARVNPAVLFIALL 353 >gi|332188216|ref|ZP_08389944.1| hypothetical protein SUS17_3356 [Sphingomonas sp. S17] gi|332011715|gb|EGI53792.1| hypothetical protein SUS17_3356 [Sphingomonas sp. S17] Length = 356 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 91/314 (28%), Gaps = 20/314 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + + L+ + +I ++V + ++ Sbjct: 48 LLVIFAGLVFATLLDGGVRLLGRVLPIGRGWRLLIVVLAVTVFLLGTFYLTGVEVTQQVT 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L S + V WL++ K L + I Sbjct: 108 QLRSTL---ETQASRVADWLAE----------------QGLMPKTSDINGLLKQSMGSIG 148 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R S G + S+ ++I F D ++ L + + V Sbjct: 149 RLTSWVGT-AVGAVTSLFMILIIGLFLAMDPDGYARGLQWMVPRSARDEFAVTQERVMTT 207 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +R G + EG++ G A + GVP + LG+I I+A IP I + + + Sbjct: 208 LRKLLAGRLLGMAFEGVLTGIALMIGGVPMALLLGIIAGILAFIPNIGAIITGVLMVAVG 267 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + P + + LP T + G++GL + Sbjct: 268 FSAGTDAGFWAIGTYLVVQTFDGYVVVPMVAKRTVDLPPALTLSTQIMASALFGIMGLAL 327 Query: 331 GPVLMALIAVIWKE 344 + A+I + Sbjct: 328 ADPMTAMIKSALQR 341 >gi|169349711|ref|ZP_02866649.1| hypothetical protein CLOSPI_00449 [Clostridium spiroforme DSM 1552] gi|169293786|gb|EDS75919.1| hypothetical protein CLOSPI_00449 [Clostridium spiroforme DSM 1552] Length = 374 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 70/376 (18%), Positives = 133/376 (35%), Gaps = 24/376 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF-------------FAPVLSALIIGFTSWPI 47 M E LN + I+ +I+ II + L + P + II F + Sbjct: 1 MNENKLNYRKILEIVILGII--CYWGLNHYEMIFKSISKLISVIMPFILGFIIAFILNVL 58 Query: 48 YSSFIS---KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 K ++ F + S++ ++ L L L + E+ + + L Sbjct: 59 MIRVEKVLNKFFTTNKFQIIKRIASIILSILILLGVLLLVVKLVIPEISNAIKLITTSLP 118 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR--FGMIFLD 162 V L G L K ++ L+ F + I F S +F++ Sbjct: 119 EVFETLEKWSKGDSGISLQLKSFFDTVDVQSLTSEFSEFAKIGFTGVLGSTVDILSMFVN 178 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF----LGM 218 +II + + ++ +Q L P + + R+TF +G Sbjct: 179 GIFNIIVGFVFAIYILMSKETLKRQTRKLLSACLPPRITNKIIEIATISRTTFTNFIIGQ 238 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 TI AI G + + G P +G + I A IP + ++++ + A Sbjct: 239 TIEAIILGSLCALGMKIFGFPYAPMVGTLVGITAFIPIIGAFIGGGIGTFMIMTVDPMQA 298 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ I I + P +VG + LP + F + G G++G+ +++I Sbjct: 299 LLFIIYLVILQQIEGDLIYPRVVGSSVGLPSIWVLFAVTVGGGLWGIVGVLFSVPTLSVI 358 Query: 339 AVIWKESIMAIKENKE 354 ++ KE I ++ E Sbjct: 359 YLLLKEYINNRSKSLE 374 >gi|19703688|ref|NP_603250.1| permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713810|gb|AAL94549.1| Permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 331 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 120/331 (36%), Gaps = 8/331 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V ++ +FI+ L + + Sbjct: 5 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIVFIIVIFIILSLIVIPEIIS 64 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ I +I + ++T ++ + + TN Sbjct: 65 SIKTLNDIYPTISEKVIITG---KNIANYLAKKNIYTINMDEIDNYFTNFVSNNTTNITK 121 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 I + + ++ + F D + + L+++ + +F Y K Sbjct: 122 LISSILGSLIDWTIGFT-NLFLAFVLAFLILLDKKHLIKTLENMIKIIFGVKNTPYIMKK 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + G I++ GL + + G P ++ I MIP I Sbjct: 181 LSLSKDIFLGYVSGKIIVSTIVGLCVYIVLLITGTPYAALSAILLGIGNMIPYVGSIIGG 240 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ +L++ L + I + + P ++G + L ++ Sbjct: 241 IIAFFLILLVAPIKTIILLVAITISQLVDGFIVGPKIIGNKVGLNTFWIIVSMIIFGNLF 300 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+F+G +M+++ + + + + ++ E Sbjct: 301 GIVGMFLGAPIMSILKLFYVDLLKKAEQGGE 331 >gi|227537967|ref|ZP_03968016.1| permease [Sphingobacterium spiritivorum ATCC 33300] gi|227242043|gb|EEI92058.1| permease [Sphingobacterium spiritivorum ATCC 33300] Length = 353 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 123/351 (35%), Gaps = 23/351 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M++ + P I I+ I++ Y + P++ ++ P+ + K Sbjct: 1 MQKFISLPFYIKLACILISIVILGYLARIGDTIIVPLILGILFAMLLTPLSTLLEKKLRF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T ++ + LF L Y ++ L P + I G+ Sbjct: 61 PRTLAGIV----CIVLFFGGLATGLYLLASQLSMLQEDW----------PAFKHQILDGV 106 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIAL 174 + W H Q + ++ L + G + + ++F + Sbjct: 107 EVVQDWVNHQFGIQYNEQMN--LLNKTASKSVDSGTLILGTALMSLSSIAIFLVFTFLYT 164 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF I + L L +I V V++ +G+ + + ++ A Sbjct: 165 FFILIYRGHIVRFLLYLNAKEDHPVVLEIVAEVQYVVKRYLIGLLLQMLIVTTLVYIALA 224 Query: 235 LAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + GV + L +IT + ++P G S V++ + +F+ +I I Sbjct: 225 IIGVKYSLLLAIITGVFNVLPYIGIFSSMFIVALITFATSTFSHVLFVFVAMSIIHMIDS 284 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P +VG +K+ L +V G G+ G+F+ L+A++ ++ Sbjct: 285 NVIVPKVVGSKVKINSLFAMMAIVCGELIWGISGMFLAIPLLAIVKIVMDR 335 >gi|167755695|ref|ZP_02427822.1| hypothetical protein CLORAM_01210 [Clostridium ramosum DSM 1402] gi|167704634|gb|EDS19213.1| hypothetical protein CLORAM_01210 [Clostridium ramosum DSM 1402] Length = 339 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 130/331 (39%), Gaps = 18/331 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 MI+ +I+++ Y L + P+ + +I P+ + I + + FL+ V L Sbjct: 12 LMIIIMIVIATYVLINWLIPLFFSCLIVLVLQPLLAKEIKLLKIENIFLSKCLIVFNYLL 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 FI ++ + + ++++ ++ + P +L ++ + + + Sbjct: 72 FIGVIIAMIIFAVIQIYTVLELL----------PNYLENLYQLFSQNHYIIDATKYLDVI 121 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S + +++ FI + M +IF++I F D I + + E Sbjct: 122 YSGSMSIVESISTGFITGLIAFI-MKIPSILFDLIFVVITSLFILLDYSRIERLVVKRYE 180 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I + +V+ + F II I L + + G+ + L I AI Sbjct: 181 MVA-----LIIDTIKEVLSNLFKAYFIIMIITFGELWLGFKIIGINHSIMLACIIAIFDF 235 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + I + I+ A L + I + L P L+ + + + + Sbjct: 236 MPVLGLDMIMIPWIIISALTNKIYLAGALLVIYMIIVITK-NILEPKLIAKNLGVTPVLS 294 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G++ MG++GL I P L+ +I I K Sbjct: 295 LVGMYLGMKVMGVIGLIIVPTLLMVIIQILK 325 >gi|119944689|ref|YP_942369.1| permease [Psychromonas ingrahamii 37] gi|119863293|gb|ABM02770.1| permease [Psychromonas ingrahamii 37] Length = 361 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 103/328 (31%), Gaps = 14/328 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 YFL G P+ AL++ + WPI ++ + + + T +I + L L Sbjct: 29 FAVFYFLGGILTPLFVALVLAYLLDWPIN--YLMRLKFNRTLSTLIVMAVFLSLAFFAFL 86 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + + + V ++ +P ++L+ Sbjct: 87 GILPTVFRQGVAFIRDLPVMFN---QVQEYILTLPILYPDLIDPATFTLLVENLRTYI-- 141 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + F+ + + + I + + + F +D + Sbjct: 142 ---LDTGGFLLSHSLASLLDVAALLVYCILVPLMMLFMLKDKNKLITSFVQFLPR-DRKL 197 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 ++ + I + G I + G+ ++ + L V+ + +IP GA Sbjct: 198 ADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSALLAVLVGLSVLIPYIGA 257 Query: 259 PISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++I + G+ L + AI + + P L + L + ++ Sbjct: 258 AVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVLFSEAVNLHPVVIIVSVL 317 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKES 345 G G+F L L+ + Sbjct: 318 IFGGLWGFWGVFFAIPLATLVKAVLNAW 345 >gi|296155958|ref|ZP_06838797.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295893464|gb|EFG73243.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 650 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 108/330 (32%), Gaps = 20/330 (6%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVMCLFI 75 +++ +LYF + P+ ++++ F P+ S F+AV+ ++ + Sbjct: 32 VVVVCALYFGRAVLIPITLSVLLSFLLAPLVQMLRRLHMGQLPSIFIAVLFALASLLAVG 91 Query: 76 VPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSD---------IPGGMWASEL 122 + ++ + + K+ + + L P Sbjct: 92 ALIGAQLVQLAGDLPQYQVAIEQKIETVQEKTVGRADSLMSRAAVALQRVAPSRPNPPRP 151 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + ++ E + + + A + ++ + I +++ +F + Sbjct: 152 TGRAARNAPAVPQPVEVHEPSPTPLQLAQRALSPAIAPIE--TTFIVLVVTIFILLQRED 209 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + G I+ ++ R F+ + + G V+ + GVP + Sbjct: 210 LRDRLISLFGSRDLHRTTTAINDAAVRLSR-YFVAQLGVNLSAGGVIAIGLAIIGVPGAL 268 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 GVI A++ +P ++++L I+ A + + + + P L Sbjct: 269 LFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDLVAGQIAEPLL 328 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G L L + G +GL + Sbjct: 329 YGHRSGLSPLAVVVAAIFWSWLWGPIGLVL 358 >gi|150004388|ref|YP_001299132.1| putative permease [Bacteroides vulgatus ATCC 8482] gi|294776785|ref|ZP_06742248.1| membrane family protein [Bacteroides vulgatus PC510] gi|149932812|gb|ABR39510.1| putative permease [Bacteroides vulgatus ATCC 8482] gi|294449261|gb|EFG17798.1| membrane family protein [Bacteroides vulgatus PC510] Length = 378 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 129/365 (35%), Gaps = 19/365 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + + +R ++ ++++ + +L G P A +I + +P+ F +K Sbjct: 1 MIQKKITFDSFIRGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLIYPMVIFFQNKLR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + ++++ + V+ + F + + E K+ + IPG Sbjct: 61 LRNRVISILVVLLVLLSI---ITLAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPG- 116 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM---IFLDYCLSIIFMIIA 173 + +H+ + + L+E+ + +P+ + I S I ++ Sbjct: 117 -TVANFIKEHIDMLKIHEALNESNFANTMRNVLPQVWALLTQSVNIVFSVFTSFIILLYT 175 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF D +I++ L I V + F G +A G++ + Sbjct: 176 -FFILLDYEAIARGWIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGF 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCL--FLWGAI 287 + P + G+ ++ M+P I+F + L+ G F FL I Sbjct: 235 LIIDFPLAIGFGLFIGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCI 294 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 I D + P ++G L L MG++G+ I +L+ ++ I Sbjct: 295 VQIIQDGLIVPKVMGKITGLNPAIILLSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIR 354 Query: 348 AIKEN 352 ++ Sbjct: 355 IKEKE 359 >gi|149002409|ref|ZP_01827343.1| hypothetical protein CGSSp14BS69_11811 [Streptococcus pneumoniae SP14-BS69] gi|147759346|gb|EDK66338.1| hypothetical protein CGSSp14BS69_11811 [Streptococcus pneumoniae SP14-BS69] Length = 347 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 97/288 (33%), Gaps = 6/288 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P L + + + PI + + + +I +++ ++ +++L Sbjct: 37 VLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPIL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L ++ + V + D+ L + +L + + N Sbjct: 97 INQLSSL---IISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVD---ILQNI 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + L +I + L +F DG L+ + + + Sbjct: 151 LNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G++I AI G + Y + G+ + + + + +IP P Sbjct: 211 NLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I I + ++ + + L P +VG +K+ + F Sbjct: 271 MIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITIF 318 >gi|110801094|ref|YP_695168.1| hypothetical protein CPF_0716 [Clostridium perfringens ATCC 13124] gi|110675741|gb|ABG84728.1| putative membrane protein [Clostridium perfringens ATCC 13124] Length = 366 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 99/323 (30%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA------VIATVSVMCLFIVPLL 79 +K + A ++ E S + TV+++ L Sbjct: 16 LVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVTIIVLVGAISA 75 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +V + +++ + + + + T Sbjct: 76 IILFVVPQLTSSVVKLTESIPTYLKSFEVNMNNYADSTVLLSKVWDQVMNTWQEILKTVT 135 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +D+CL+ + I L + I + + + Sbjct: 136 HLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKKVMYAYLRGDIADK 195 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I + +V +G A+ G + + +P + V+ ++IP Sbjct: 196 ILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISVLVGTTSLIPILGA 255 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T S +L+ N A ++ + + P +VGG + L L ++ G Sbjct: 256 FIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVGLSSLWVMLAIMIG 315 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +G+ +G A+I ++ Sbjct: 316 GSAFGFIGMLVGVPTAAVIYCVF 338 >gi|292492672|ref|YP_003528111.1| hypothetical protein Nhal_2648 [Nitrosococcus halophilus Nc4] gi|291581267|gb|ADE15724.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 370 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 111/341 (32%), Gaps = 12/341 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ +++ + V++ + APVL++L+I + I + Sbjct: 14 DPQVAGLAILLVVGFVTVVLMGRMLAPVLASLVIAYLLEGIVGYMERWRCPR-------- 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++V +F+ + LF + L ++ Q + ++ + Sbjct: 66 WLAVTLVFVTFMAALFSVIFGLLPLLSQQLTQFFQQLPTMIARGQELLLSLPEHYPNLFS 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + L G + + M + + ++ M + +FFF +D + Sbjct: 126 EEQVYDLMSAIRSELAQLGQKVLSLSLASV-MGIMTLGVYLVIMPLLVFFFLKDKVRLIG 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ V I + G + + +V + L G+ + L V Sbjct: 185 WFKQYLPR-ERKLAAQVWHDVDFQIGNYVRGKFLEILIVWMVSFITFSLMGLQFSMLLSV 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + +IP GA + ++ + G L AI + L P L Sbjct: 244 LVGLSVIIPYIGAVTATMPIAFVAYFQWGFSAEFAYLLGAYAIIQALDGNVLVPLLFAEV 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L+ + K Sbjct: 304 VDLHPVAIIVAILVFGGFWGFWGIFFAIPLATLVQAVLKAW 344 >gi|317056391|ref|YP_004104858.1| hypothetical protein Rumal_1726 [Ruminococcus albus 7] gi|315448660|gb|ADU22224.1| protein of unknown function UPF0118 [Ruminococcus albus 7] Length = 431 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 100/312 (32%), Gaps = 21/312 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEES-------STFLAVIATVS 69 IL S+Y PV L+I F + P+ + + +S S + ++ + Sbjct: 36 ILESIYNFFNVLQPVTWGLVIAFLTNPVMERTSKLLQRFNKSEEKKPGFSKLIKAVSVII 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIP-----GGMWASELW 123 LF+ + + + E+ + V + A V +W++ I A++ Sbjct: 96 TELLFLGIVTGIVAIVVPELIKSVMDIFDNAGSIVESVQKWINKIFRNYPSLEKSATKWL 155 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + ++ + L+ I A + ++ L I + L + Sbjct: 156 SDFNTDVGTIYDKLKPMLEN-----ILSGAWGIVTVVKNFLLGFIVSVYMLCNKEKLLAQ 210 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + + S+ V G I +I GL+ + +P Sbjct: 211 IKKIIISMTRKRTCEKLMSAFEQANTVFSGFITGKIIDSIIIGLICFIGLTIMSMPYATM 270 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + V+ + +IP P+ + L++ ++ + L P ++G Sbjct: 271 ISVVIGVTNIIPFFGPLFGAVPTGLLILLIAPKKCIIFIIFVVVLQQFDGNILGPKILGD 330 Query: 304 PIKLPFLPTFFG 315 LP Sbjct: 331 STGLPGFWVLIS 342 >gi|91778865|ref|YP_554073.1| membrane transporter [Burkholderia xenovorans LB400] gi|91691525|gb|ABE34723.1| Putative membrane transport protein [Burkholderia xenovorans LB400] Length = 650 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 100/336 (29%), Gaps = 32/336 (9%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +++ LYF + P+ ++++ F P+ S+ + Sbjct: 32 VVVVCGLYFGRAVLIPITLSVLLSFLLAPLVQMLRRLHMGQ--------LPSIFIAVLFA 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L L G L +LV Q+ + + + + + + ++ Sbjct: 84 LASLLAIGALIGAQLVQLAGDLPQYQVAIEQKIETVQEKTVGRADSLMSRAAVALQRVAP 143 Query: 138 ETFLKTNGIDFIPRFA----------------SRFGMIFLDYCL-----SIIFMIIALFF 176 R A + L + + I +++ +F Sbjct: 144 SRPNPPRATGRAARNAPAVPQPVEVHEPSPTPLQLAQRALSPAIAPIETTFIVLVVTIFI 203 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + + G I+ ++ R F+ + + G V+ + Sbjct: 204 LLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSR-YFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDLVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L G L L + G +GL + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVL 358 >gi|331700977|ref|YP_004397936.1| hypothetical protein Lbuc_0607 [Lactobacillus buchneri NRRL B-30929] gi|329128320|gb|AEB72873.1| protein of unknown function UPF0118 [Lactobacillus buchneri NRRL B-30929] Length = 349 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 115/341 (33%), Gaps = 22/341 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + R+ ++ +++ LY + + VL I + + A I Sbjct: 8 VNNVPLRRFTVLMLVIFVLYVTRSMISTVLLTFIFCL----LVVKLTNAIRRHIKIPAGI 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V L I+ L F + ++ + + P+ L D W +EL + Sbjct: 64 IVTVVYLLVILGLYFAVTKYIPKIADQTIRTTQDIILFYTDPKNLPDDTTMSWLNELIKQ 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q NG+ + ++ + G +++ +I FFF + +++ Sbjct: 124 SNIMAQM----------KNGVSLVWKYVTGVGT----MGITLFLSMILSFFFAIEQRTMT 169 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + E F +++ + IAI ++ +P Sbjct: 170 RFSKLFLESDFGWFFQDLYFFGKKFVATFGVVIEAQFFIAICNTVLTTIVMAFMHLPQLA 229 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 AL ++ I+++IP G ISF +S+ G + L + + L P + Sbjct: 230 ALALMVFILSLIPVAGVIISFVPLSLVGYSVGGWNDVFYLLITIIVVHAFEAYILNPNFM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL G + I Sbjct: 290 ASKTNLPIFYTFVVLLIGEHFFGIWGLICGVPIFTFFLDIL 330 >gi|300703166|ref|YP_003744768.1| permease [Ralstonia solanacearum CFBP2957] gi|299070829|emb|CBJ42126.1| putative permease transmembrane transport protein (perM) [Ralstonia solanacearum CFBP2957] Length = 356 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 116/345 (33%), Gaps = 12/345 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T + + + I L L L P + A I+ + P + Sbjct: 7 TQDTKRTLAWIAVAVIFLALLKLLAPTLTPFVFAFILSYILHPGVEWLQRHRVPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V + ++ + +L + L ++ + + L+ A Sbjct: 62 ---VLGVFLMILLLAVLAVALMLLILAVLQREIPAIREQLPGMLSKLNAAITPRLAEMGL 118 Query: 124 TKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 P K+L+E + + + + G + + + I +F+ D Sbjct: 119 HVRFDFPGLRKLLTEQLAASPEDVMSTALNYLRVSGSAAVQLLGIVFLVPIVMFYLLMDW 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++L+ + ++++ ++ G I+ + + S LAG Sbjct: 179 NMLMRRLEGTVPRRWIGKARELAAETDGLLSQYLRGQIIVMLVLAVYYSSGLALAGFDVA 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +G+ T + IP ++I LL GN++ + + I + L P Sbjct: 239 LPIGIFTGLAVFIPYIGFGIGLTLAILSALLQFGNLYGLLAVAVVYGIGQVLEGFYLTPR 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LVG I L L L+ + G G+ + + A++ V ++ Sbjct: 299 LVGERIGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|110802939|ref|YP_698033.1| permease [Clostridium perfringens SM101] gi|110683440|gb|ABG86810.1| putative membrane protein [Clostridium perfringens SM101] Length = 391 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 100/283 (35%), Gaps = 9/283 (3%) Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T + +I T+S + LF+VP L + E K N + L Sbjct: 90 TIIVLIGTISAIILFVVPQLTSSVVKLTESIPTYLKSFEVNMNNYADSTLL--------L 141 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S++W + ++ Q + T L ++ +D+ L+ + I L + Sbjct: 142 SKVWDQVMNAWQEILKTV-THLFGGLASYLVGLTVDVTTAIIDFFLAFVLAIYMLSSKEK 200 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 I + + + +I + +V +G A+ G + + +P Sbjct: 201 LICQIKKVMYAYLRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMP 260 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ ++IP T S +L+ N A ++ + + P Sbjct: 261 YAFLISVLVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPR 320 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +VGG + L L ++ G G +G+ +G A+I ++ Sbjct: 321 VVGGSVGLSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|262066651|ref|ZP_06026263.1| permease [Fusobacterium periodonticum ATCC 33693] gi|291379610|gb|EFE87128.1| permease [Fusobacterium periodonticum ATCC 33693] Length = 364 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 128/331 (38%), Gaps = 8/331 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+F ++ A+ I PI K + + ++ V+ + I+ L + + Sbjct: 38 GYFMTLIMAIFIAILLEPIEKYLKKKSKINDILAISLSIAFVVLIVIIMSLIVIPEIISS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K L ++ + + + +++ + T+ L+ + I + T +N +F Sbjct: 98 LKVLNDMYPAISEKVLTIGKDVTNYLAEKNIYTVSTEELNDSFTNFISNNT---SNIKEF 154 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKIS 204 + F L + ++I F D ++ + L++L + +F Y Sbjct: 155 VFAFVGGLVNWTLGFT-NLIIAFTLAFLILLDKKNLIKTLENLIKIIFGVKNTPYIMNKL 213 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R+ + S G I++ GL + + G P ++ + MIP I Sbjct: 214 RLSKDIFISYISGKIIVSSIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIFGGI 273 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+ +L++ L + I + + P ++G + L ++ G Sbjct: 274 VAFFLILLVAPIKTLILLIAIIISQLVDGFVVGPKIIGNKVGLSTFWVMVSMIIFGNLFG 333 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++G+F+G ++++I + + + + ++ ++ Sbjct: 334 IVGMFLGTPILSIIKLFYVDLLKRAEQGGKE 364 >gi|294140667|ref|YP_003556645.1| permease PerM [Shewanella violacea DSS12] gi|293327136|dbj|BAJ01867.1| permease PerM, putative [Shewanella violacea DSS12] Length = 360 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 106/304 (34%), Gaps = 14/304 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG- 103 WP+ +S+ + T A + + + +V + L + LV+ + G Sbjct: 54 WPVAQ--MSRLGINRTTAASLVLFMFVGVMLVLIFGLVPSIWKQGVALVTDLPTMLDKGL 111 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 I +++ P + +L S+ I + L T + I + + L Sbjct: 112 ITAQGYINQYPQFINPDQL--------DSMVIELKKMLDTQHLLDIGKQILGYSASLLVL 163 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I + + +FFF +D + K+ + + I + G I I Sbjct: 164 MVYAILVPLLVFFFLKDKDELLSGSKRFIPT-NRDLAHKVWIEMNQQIFNYIRGKVIEII 222 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF 282 G+V + L + LGV+T +IP GA + +++ + I Sbjct: 223 IIGVVSYIFFALMDLRYAALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGISPEFGYL 282 Query: 283 LWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G + +D L P + + L + ++ G+ G+F L +L+ + Sbjct: 283 MLGYAIIQALDGNVLVPIVFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAV 342 Query: 342 WKES 345 Sbjct: 343 LNAW 346 >gi|157961490|ref|YP_001501524.1| hypothetical protein Spea_1665 [Shewanella pealeana ATCC 700345] gi|157846490|gb|ABV86989.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 382 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 114/335 (34%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + ++ I P+ S + +A + Sbjct: 12 KGFAISAFIVVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPR-----GLAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ L I W+ + Sbjct: 67 LLMVFIVLMGLWLASVVGTSINEFSKQLPLYRDQLIEQFSWVVE--------------KL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++I E L + ++ +I+ + F + S ++ Sbjct: 113 AAFNIQISKEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFILFESNGFSTKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L K++ R + V + + ++++ GL++G + GV + GVI Sbjct: 173 -HLALDDPDMRLKQVDRFLNSVNQYMVIKT-LVSLATGLIIGVGLYFIGVDYALLWGVIA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A + L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNMVMGNAVEPRYMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L F L+ +G +G+ + P+ M + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIAL 325 >gi|238060754|ref|ZP_04605463.1| hypothetical protein MCAG_01720 [Micromonospora sp. ATCC 39149] gi|237882565|gb|EEP71393.1| hypothetical protein MCAG_01720 [Micromonospora sp. ATCC 39149] Length = 412 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 125/345 (36%), Gaps = 18/345 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + ++ + + + + G V+ AL + P S + T++ Sbjct: 85 GALGVLLAYAVFLGVRNSAGILVLVVIALFLAVGLNPAVVRLRSW-GLPNGLAVTAVTLT 143 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + L+ L + + + V ++ P ++ ++ ++ ++ Sbjct: 144 VLLLIVGGLVALVPPVVTQSGQFVEQL----------PSYVEELRRNKAVNDFVVRYDVM 193 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + FG +F + ++ + +F + + Sbjct: 194 DKVKAAADADTIGRALGGVLGGAQLIFGTVFRALTVLVLTIYFLAYF-----DRLRRVGY 248 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + I + + + +G IA+ G+ + G+P AL V+ A Sbjct: 249 ALVPRSRRRRVRLIGDEILAKVGAYMVGALGIAVLAGVTTFVFALVVGLPYPFALAVVVA 308 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP GA + VS+ ++ + + + + + P ++ +++ Sbjct: 309 VADLIPQIGATLGAVVVSLVGFAT-DLPVGIACVAFFVVYQQVENYLIYPKVMRRSVEVN 367 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + GV MG++G I +A + +I +E ++ ++ + Sbjct: 368 EVAALLAALLGVSLMGVVGALIAIPTVAALQLILREVVLPRQDRR 412 >gi|16800017|ref|NP_470285.1| hypothetical protein lin0948 [Listeria innocua Clip11262] gi|16413407|emb|CAC96179.1| lin0948 [Listeria innocua Clip11262] gi|313619684|gb|EFR91311.1| membrane protein YdbI [Listeria innocua FSL S4-378] gi|313624382|gb|EFR94403.1| membrane protein YdbI [Listeria innocua FSL J1-023] Length = 348 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 114/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRIRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYCLVAMFLYVAIVHFLPILIDQISQLVDSLVKIYNN--PSDNKIVQWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------TGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L P Sbjct: 164 RVTSFTGQFLTSKVGFIFKEAAFFGKKFVATFGVVLEAQLMIALVNTIITTIALYLMNFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILD 328 >gi|319638220|ref|ZP_07992983.1| GNAT family Acetyltransferase [Neisseria mucosa C102] gi|317400493|gb|EFV81151.1| GNAT family Acetyltransferase [Neisseria mucosa C102] Length = 356 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 125/337 (37%), Gaps = 10/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ + LY L P + A ++ + P+ + ++I Sbjct: 13 IIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWL-QLRRIRRAPASMIIMAFA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ + + WL+ + G + Sbjct: 72 LLVLLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKLLPWLNSVSG-----DYIQIDQES 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L +IP + G + +++ + + L++F D S + Sbjct: 127 IIAWLQSHTDELSNTLKAWIPTLMRQSG-NVISGVSNLVLLPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISSNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKL 307 I+ IP + ++ + L +W + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATVAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ + MG +G+ G L A+ V+ +E Sbjct: 306 SPLWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|111018222|ref|YP_701194.1| hypothetical protein RHA1_ro01211 [Rhodococcus jostii RHA1] gi|110817752|gb|ABG93036.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 389 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 115/351 (32%), Gaps = 27/351 (7%) Query: 13 RWMIMFIILVSLYF------------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 RW++ I+ V L L+ F + A + T P+ + Sbjct: 24 RWLLPSILYVLLAVAAYQLSGWLFVNLRSFLGLLFLAWLFSITIEPVVDWLERR--GLRR 81 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + + +F + L LF + Q +P LS + W++ Sbjct: 82 GAATGLVLFALFVFAIGFLALFGTLLA---------QQLAQLLKALPGALSSV--TDWSN 130 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + L L+ ++ F P L ++ +++ +F+ Sbjct: 131 RVFDTDFATGEDLIHLTPETIRDLAERFTPGVLGVL-SSLLGVVFQMLTLLLFVFYMSAQ 189 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + + S + I + + I+A + G GVP Sbjct: 190 GPALRRTISSWFPARQQGVISVVWEISVEKAGGYVVSRLILAAVSSVATGIFLVAIGVPY 249 Query: 241 HVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L + T I++ +P A+ + + + ++G + I + L P Sbjct: 250 WLPLALWTGIVSQFVPTLGTYLAIALPAIIAAASQPMDGVWVIVFGTVYQQIENYVLHPR 309 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + F ++ G G +G + ++A I + + + Sbjct: 310 ITSATVSIHPAVAFGSVIVGASLFGPVGALVSVPVVAAIQALVETYGRRYE 360 >gi|15613026|ref|NP_241329.1| hypothetical protein BH0463 [Bacillus halodurans C-125] gi|10173076|dbj|BAB04182.1| BH0463 [Bacillus halodurans C-125] Length = 372 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 114/333 (34%), Gaps = 16/333 (4%) Query: 11 IMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS------- 59 I R +I+ +++ +LYF P L A ++ F PI ++ Sbjct: 9 IARLLIVALLIATGLYALYFFLSLTYPFLIAALLAFFMNPIVNTLEKDIRLPRPLAVLVS 68 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP---VPRWLSDIPGG 116 L ++ + IV ++ F Y L + + ++ + Q+ + +P W + Sbjct: 69 LLLLFGLIGGLVTIMIVKMIDGFRYLSLMVPTQIERISMTIQNYVNEQILPLWNQGLGLI 128 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + L L N I S ++F+I+ L+F Sbjct: 129 DRLEPSQQRALEEGIQQLGGQLASLLGNLGQAIANGLSHIVSALPLTLTVVVFIILGLYF 188 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D + + + + + + I+ L+ + Sbjct: 189 ISKDWNKFKMAARTRLPFIVRRRTLDVIKDLKTKVFGFITAQVILISLTALINFIGLLVL 248 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V + +I ++ ++P G I IY ++ GN+F L + + ++ + Sbjct: 249 QVEHPFTIALIIGLVDLLPYLGTGIILIPWGIYSIVTGNLFLGVGLLALYGLTV-LIRQL 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 P ++ + L L T L G++ G+LGL Sbjct: 308 AEPKVLSSSLGLNPLATLISLFAGLQLFGVLGL 340 >gi|300741320|ref|ZP_07071341.1| putative permease [Rothia dentocariosa M567] gi|300380505|gb|EFJ77067.1| putative permease [Rothia dentocariosa M567] Length = 396 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 100/317 (31%), Gaps = 8/317 (2%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A+ I PI S + VI +S + ++++ + V + Sbjct: 88 AIFIALGLDPIVRKLES-FGVKRSAGVVIVVLSFAAIISGLVVWIVPIISAQASSFVYRA 146 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q I I + ++ + + E+ ++ + Sbjct: 147 PAIYQDFIDS-DTFKRIDDVLHVNDWVNNN------VPKFLESLTSSSAVGGFMSNLITA 199 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G I ++ +F +I L ++++ + + + + Sbjct: 200 GSTIAQILTGTIIVLFLSLYFLSSMRTIKAWGSRLAPASKRERVEELTERITGAVGNYVM 259 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G ++A+ + G + V I+A IP ++ + +L+ Sbjct: 260 GQGVVAVLNATFALITMIILGFSFPQLVAVFVLILAFIPLVGGVAALVLVSLILLTQGWQ 319 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + + I L I + P ++ + +P + G G+LG I + A Sbjct: 320 MSVTFAIAYFIYLQIEAYIISPRIMSKAVSVPGGVAIIAVAAGGALWGVLGALIAIPVAA 379 Query: 337 LIAVIWKESIMAIKENK 353 + ++ KE + ++++ Sbjct: 380 SLLILVKEVFIPRQDHR 396 >gi|163801820|ref|ZP_02195717.1| uracil phosphoribosyltransferase [Vibrio sp. AND4] gi|159174328|gb|EDP59132.1| uracil phosphoribosyltransferase [Vibrio sp. AND4] Length = 356 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 125/343 (36%), Gaps = 20/343 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + I+ +++YFL AP+L A+++ + WP+ + TF +I Sbjct: 15 DPHAVSLVAILLFGFITIYFLGHLIAPLLVAIVLAYLLEWPVIQMC--RLGIPRTFSVII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ + + ++++ +P Sbjct: 73 VILIFIGLMLIAVFGLVPTIWTQVGNLINDIP---NMYAGLQKFIATLPE----RYPELA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF--- 182 +L ++L ++ G + + + + +I + + +FF +D Sbjct: 126 NLRIVETLVTNAKNQAIGLGESVVKGSLASL-VSLATLAVYLILVPLLVFFLLKDKEEMM 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S++ + L W +++ + IR L + I+ G V + + + Sbjct: 185 SMASGILPKNRRLANKVWHEMNEQISNYIRGKVLEILIV----GSVSYVTFAILDLRYSA 240 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFL 300 L V + +IP GA V+I L + + L + I + L P L Sbjct: 241 LLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLAPPFYWLLVAYGIIQALDGNVLVPVL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G G+F L L+ +W Sbjct: 301 FSEAVNLHPVAIIVAVLVFGGMWGFWGVFFAIPLATLVKAVWN 343 >gi|116624022|ref|YP_826178.1| hypothetical protein Acid_4934 [Candidatus Solibacter usitatus Ellin6076] gi|116227184|gb|ABJ85893.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 359 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 115/302 (38%), Gaps = 11/302 (3%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 AL+ + P+ + + TV++ +++ + +V++ Sbjct: 42 ALLFAYLLSPLVNLLDRALPNRTR------TVALALAYVIFIGLAVLVVTQVGVRVVAQA 95 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A++ +P ++ ++ L I SE + +T+ I AS Sbjct: 96 QAASKK---LPDMMAKWEEPSPSAPENVNTLKARVVQTIRSEMYKRTSDILNALPGASLK 152 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH-LFPAYWKKISRIVPKVIRSTF 215 + + ++ + + FFF +DG I + S+ + A + + ++ Sbjct: 153 FLEVASDVIYVVIVPVLAFFFLKDGELIRVHMLSVVDAGPLRAMVDSLLEDIHLLLAHYM 212 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 + ++++ + A+ + G+P + L V+ + IP P++ A + + Sbjct: 213 RALVLLSLNTFVFYSVAFTIMGMPFGILLAVMGMCLEFIPMIGPLTAAAAILIVAAVSGA 272 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + ++ + D + P L+G ++L L FG+ GG G+ G F+ ++ Sbjct: 273 SI-LTVLIFLVAYRMLQDYFVSPHLMGQGVELHPLLVLFGVFGGAEVAGVAGSFLSVPVL 331 Query: 336 AL 337 AL Sbjct: 332 AL 333 >gi|160931224|ref|ZP_02078626.1| hypothetical protein CLOLEP_00061 [Clostridium leptum DSM 753] gi|156869779|gb|EDO63151.1| hypothetical protein CLOLEP_00061 [Clostridium leptum DSM 753] Length = 445 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 118/347 (34%), Gaps = 24/347 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------------STFLAVIATVSVMCL 73 + G AP + L++ F +Y F K ++ + V Sbjct: 36 VSGLLAPFIYGLVLAFLVNGLYEFFRQKVFRRLGEKKNGKYIRQVRALSVTVSYLLVFLC 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + ++ + +L + + + ++D GM + + K + + Sbjct: 96 VTAMVWIVIPQLVVSISQLGKNIGGYAES---AEKAVTDFIAGMGLNAGFQKQIDLFWNQ 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + + F F +++ + ++ + L+ ++ +Q+ L Sbjct: 153 LGTQITNIAGQVAPKLIDFTMDFTTGVINWVIGLVVSVYMLY----SKETLIRQVKKLVV 208 Query: 194 HLFPAYWKKISRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + P V V F LG ++ ++ + +P + + V+ Sbjct: 209 AVLPVKISDKVLEVGAVSNRIFVRYLLGRIYDSLIVLVLCFIGMSILQMPYALLISVVVG 268 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP P S +L+ + ++ + + + P +VG + + Sbjct: 269 VTNIIPVFGPFLGGVPSALILLMVDPMKGLWFIIFIIVLQQVDGNIICPLIVGDSLGISG 328 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G+ G G+ G+ +G ++A++ ++ E + + K + Sbjct: 329 IWVLAGVTLGGGLGGVAGMVLGVPILAVLYLLLSEFVNKRLQKKGTV 375 >gi|116073974|ref|ZP_01471236.1| hypothetical protein RS9916_36027 [Synechococcus sp. RS9916] gi|116069279|gb|EAU75031.1| hypothetical protein RS9916_36027 [Synechococcus sp. RS9916] Length = 350 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 108/290 (37%), Gaps = 17/290 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L++ +I F I +++++ ++ + + ++ L + Sbjct: 30 LAPFPGLFLTSALIAFLLD-IPRRWLTRRGLPRWLAILVVALLTVGTLVLAGFTLVPLLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TN 144 ++ +L++ +P WL G + + W P LS L + Sbjct: 89 DQLVQLIN----------ALPSWLEAAEGWINRVQEWALQRGLPSDFGDLSSDLLTRISQ 138 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L ++I+ +++ FF G SI+ L L ++ + Sbjct: 139 VASQLSQRLLGILGATLGTTINIVIVLVLAVFFLLGGESITAGLARW---LPDSWRNLVV 195 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + R F G ++A+ L + + G+P V V+ ++P + ++ A Sbjct: 196 STITRTFRGYFAGQVLLALILSLGQMVVFTVLGIPYGVLFAVLIGFTTLLPYASALTIVA 255 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 VS L ++ + + + + IVD+ ++P L+G + L Sbjct: 256 VSALLAVQ-DPSTGLEILVAAILVGQIVDQVIQPHLMGNLLGLQPAWLLI 304 >gi|255994755|ref|ZP_05427890.1| membrane protein [Eubacterium saphenum ATCC 49989] gi|255993468|gb|EEU03557.1| membrane protein [Eubacterium saphenum ATCC 49989] Length = 390 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 117/337 (34%), Gaps = 12/337 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVPLLFLFYY 84 P+ +++ F +PI + ++ +L ++ ++ I +++ Sbjct: 56 LYPLWIGILLAFILYPIVKKIENLLSPYFKSKKIPKYLGILTSLLAFIAIISLIIYGLTS 115 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +L + + ++ + +SE S S+ + +L + Sbjct: 116 LILGQLTFSNLSSNLGKVTEIFTKYKLALEEWGKSSEYANVISSQIVSVSTSALNWLTSI 175 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQLDSLGEHLFPAYWK 201 + + G+ + + +I I L +F R +++ + + + Sbjct: 176 FSASLFEGLKKVGISLFNVIIGMIMCIYILIDHTYFTRKIKRVARLIVRNKQR--RSTLS 233 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPI 260 + + ++ G+ + A+ ++ + G+ V LG+ +M +IP G Sbjct: 234 NLMNDIVNILALFVRGVLLDALIIAVLSSILLTVLGIKFSVFLGIFAGVMNIIPYFGPFA 293 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V I I + + + + + P +VG + L L + G Sbjct: 294 GMVPVFILTSITSSPLHGAIAVIAMIVLQQFDANLIYPKIVGEKLGLHPLIVILSVTVGW 353 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GLL + I + +I I + I+ ++ K++ S Sbjct: 354 YYGGLLAMIIAAPVATIIIKILRAFIVKLENTKKQPS 390 >gi|325981599|ref|YP_004294001.1| hypothetical protein NAL212_0916 [Nitrosomonas sp. AL212] gi|325531118|gb|ADZ25839.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 410 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 8/195 (4%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR--- 205 +P+ + L+++F + LF D + + SL E ++++ ++ Sbjct: 200 LPKLINYLYKAIGTMSLALLFSFLILF----DSVRLGGLMKSLHESRLKDFYQETAQPVI 255 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 V+ +IA + + G+PS L +I + + IP G IS T Sbjct: 256 RFAYVVGRAIQAQAMIACVNTFLTLIGLVILGIPSVALLSLIVFVCSFIPVLGVFISTTP 315 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L G + A + I I L P + G +KL + L+ + G Sbjct: 316 MVLVALNTGGLTLALGIVGMITIIHIIEAYGLNPMIYGKHLKLNPVLVLIILLIAYHSFG 375 Query: 325 LLGLFIGPVLMALIA 339 L G+ +G + Sbjct: 376 LWGMILGVPVAYYFI 390 >gi|189183980|ref|YP_001937765.1| permease protein PerM [Orientia tsutsugamushi str. Ikeda] gi|189180751|dbj|BAG40531.1| permease protein PerM [Orientia tsutsugamushi str. Ikeda] Length = 350 Score = 72.9 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 123/339 (36%), Gaps = 9/339 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I+ ++I IIL YFL P L+A ++ + PI K + S Sbjct: 3 VKTNNYILYFLITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNL--- 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V +F+V L L +L M + + L + + + ++ Sbjct: 60 ----IVSIVFVVFLTILIVAALLLMPIIYKQAALLIANIPVYKATIQNFIESNNSTNNLE 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++H + I I A ++ + + ++ F I LF+F RD I Sbjct: 116 NSINHNIKHILTEIINSWILIITHILNHAWQYTITTIHSVVTAAFTGILLFYFLRDWKLI 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S+ Y KI + + + G I + + + L + + + Sbjct: 176 INSCKSILPQQSILYINKIVNSMNTSLLAYAQGQLNICLILSIFYSISLLLINLDFSLTI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ + + +IP I T++++ G F + + I + L P L+G Sbjct: 236 GLFSGTIIIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILETHFLTPKLIG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L + +F ++ +G G+F+ L +I ++ Sbjct: 296 SKVGLHPIWIYFAVLTCSYYLGFTGIFLAIPLAIIIKIV 334 >gi|302558032|ref|ZP_07310374.1| membrane protein [Streptomyces griseoflavus Tu4000] gi|302475650|gb|EFL38743.1| membrane protein [Streptomyces griseoflavus Tu4000] Length = 399 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 110/363 (30%), Gaps = 22/363 (6%) Query: 2 RETMLNPQGIMRWMIMFIIL--------VSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS 53 R P+ + R M++ + L + + L G VL A + P S + Sbjct: 8 RPGARMPRWLPRAMVLALALYAVFQLGSWAFHQLIGLLINVLIAFFLALAVEPAVSWMAA 67 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + + V+ + L ++ ++V + + Sbjct: 68 R-GVRRGLGTFLVFLGVLIAAAGFVTLLGSMLAGQIIKIVEDF-------PDYLDSVINW 119 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G + +EL + +++ + + G +F + + Sbjct: 120 INGHFHTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSTQVLGGLFQLLTIGLF----- 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F+F DG + + + SL A + I ++A+ GL Sbjct: 175 SFYFAADGPRLRRTVCSLLPPARQAEVLRAWEIAVNKTGGYLYSRGLMALVSGLAHYVLL 234 Query: 234 WLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 VP L V +++ IP A+ + + + + A + ++ I Sbjct: 235 EFLEVPYAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLVFVVIYQQFE 294 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L+P L + + F +V G +G +G I A + + Sbjct: 295 NYVLQPKLTSRTVDIHPAVAFGSVVAGTALLGAVGALIAIPATATLQAFLGAYVRRYDVT 354 Query: 353 KEK 355 + Sbjct: 355 DDP 357 >gi|300857402|ref|YP_003782386.1| hypothetical protein CLJU_c42830 [Clostridium ljungdahlii DSM 13528] gi|300437517|gb|ADK17284.1| conserved membrane protein [Clostridium ljungdahlii DSM 13528] Length = 351 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 113/335 (33%), Gaps = 6/335 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M E + I ++I++ I+ ++F + P + A K + Sbjct: 1 MNEFINKINRISLFIILYTIIFLVFFSTLNYTLPFVLAFAFALILKRPTIFISRKLRINH 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGIPVPRWLSDIPGGM 117 ++I T+ + I L F E +L +++ ++ + Sbjct: 61 ALSSLITTIIFFTVIITVLSFGITVVTQETIQLGKNTQLYISRNSDNVYNSFYKLQKYYN 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L + I + + + + I F ++A +FF Sbjct: 121 NLDPYIINALEKNFTSFITKLSNIAVTVSGKLVSSLINLLTTIPYILMVIFFTLLATYFF 180 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RD S +++L KI +++ + L II + L + L Sbjct: 181 TRDMTSSKISMNTLIPQNKTDKILKIYNESKRMLENYILSYLIIILITFLETLIVFSLFK 240 Query: 238 VPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + + L +I AI ++P G I IYL I N T L + I + ++ + Sbjct: 241 IKYALILSIICAIADLLPIIGIGAIYLPLAIIYLAIFNNYITCTGLII-SYILVSVIRQI 299 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + P +V + + + L G++ G +G+ Sbjct: 300 IEPKIVSSSLGVHPVAVLAALFIGLKADGFIGIIF 334 >gi|288957925|ref|YP_003448266.1| hypothetical protein AZL_010840 [Azospirillum sp. B510] gi|288910233|dbj|BAI71722.1| hypothetical protein AZL_010840 [Azospirillum sp. B510] Length = 370 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 100/314 (31%), Gaps = 29/314 (9%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + V L+ + G + + +++ + + I V++ L Sbjct: 54 VAALGVFLWRVSGTLLLIFTGVLLAILLQRLTGLVQRAAGLGHGWSLAIVLVTLALLVGG 113 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + ++ +L +V A + +P G Sbjct: 114 GVWLMGTSMAAQLGQLQEQVAKA----------MDMLPDG-------------------W 144 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L+ + + ++ A + + + L Sbjct: 145 RQRILEQGRDWPWMNQLGSVASGLVYVVGDAVVVMFAALYLAASPGVYQRGVVLLVPPAG 204 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ + + +G + G+++ + WL G+PS +ALG++ ++ IP Sbjct: 205 QTRACEVMAVAGDSLWKWLIGQFVAMAAVGVMIAAGLWLLGIPSALALGMVAGLLEFIPL 264 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ ++ + + +A + + + + P L + LP + T + Sbjct: 265 LGPVLAAVPALMIGFAQSPQDALWVAGLYLVIQQVEGNLITPLLQKRVVDLPPVITIGAI 324 Query: 317 VGGVRTMGLLGLFI 330 G G++G+F+ Sbjct: 325 AAGGVLFGVMGMFL 338 >gi|326384783|ref|ZP_08206459.1| hypothetical protein SCNU_17662 [Gordonia neofelifaecis NRRL B-59395] gi|326196445|gb|EGD53643.1| hypothetical protein SCNU_17662 [Gordonia neofelifaecis NRRL B-59395] Length = 366 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 21/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + + + G APV AL++ P+ ++ +LA + V + +V Sbjct: 28 IVVAVAGMKLIAGLIAPVFLALMLTIAVHPMGRWL--RRHGCPAWLAALTLVIGVYGILV 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L Y + L+ + + L Sbjct: 86 ILFGSIIYSAARLTTLMPQYADKFDSIVDD----------------LKHFLGEHGVNSES 129 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L I A + ++ +++ F D S +L +L Sbjct: 130 IHNMLSNVDAGKIISAAGSLLSGLVSTTSGLVLVLVVALFMAVDAVGFSDRLTALDR--L 187 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 R+ + T+ + ++ A W G+P + G+++ I IP Sbjct: 188 RPNVSVALNNFAAGTRTYLVVSTVFGLIVAVLDAGALWALGIPLPLLWGLLSFITNYIPN 247 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + +I L+ G + + + ++ ++P VG + L TF Sbjct: 248 IGFVLGVIPPAILGLLDGGWSKMLIVIVVYSAINVVIQSIIQPKFVGDAVGLSTTLTFLS 307 Query: 316 LVGGVRTMGLLGLFI 330 LV +G LG + Sbjct: 308 LVVWTWILGPLGAIL 322 >gi|125717110|ref|YP_001034243.1| permease, putative [Streptococcus sanguinis SK36] gi|322377490|ref|ZP_08051981.1| putative membrane protein [Streptococcus sp. M334] gi|125497027|gb|ABN43693.1| Permease, putative [Streptococcus sanguinis SK36] gi|321281690|gb|EFX58699.1| putative membrane protein [Streptococcus sp. M334] Length = 298 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 109/289 (37%), Gaps = 6/289 (2%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSH 129 + + +V L + L + L + +Q G + L+ + + +SE TK LS Sbjct: 11 IAMVLVFLSLILIVICLLVLVLPTLAQTISQLGAVLSTVLTQLGKLLDSSEFVTKDMLST 70 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + I F+ S G ++ +I+ F F ++ Sbjct: 71 IVSGIQGQSSSISQALITFLSGLTSNIG-NIFSSIMNAFLIIVFTFLFLSSKEHLAAMTS 129 Query: 190 SLGEHLFPAY----WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + +FP I ++ + + I A+ G+++ Y L G+P V G Sbjct: 130 RLLKVIFPEKVVTKLTYIGQVALETYDQFLMSQLIEAVIIGVMIAVGYSLFGLPYGVMTG 189 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +++ IP P+ V + + A L + I + P +VG I Sbjct: 190 IFAGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQSI 249 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP + T G GLLG+ + A+I + KE ++A + + Sbjct: 250 GLPAIFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQLD 298 >gi|322375735|ref|ZP_08050247.1| hypothetical protein HMPREF0849_01450 [Streptococcus sp. C300] gi|321279443|gb|EFX56484.1| hypothetical protein HMPREF0849_01450 [Streptococcus sp. C300] Length = 298 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 104/291 (35%), Gaps = 7/291 (2%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++++ +F+ +L + +L + L + V L + G L Sbjct: 11 IAMVLVFLALILIVIALLVLVLPTLAQTISQLGTVLSTVLTQLGKLLGSSEFVT--KDML 68 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S S + + I F+ S G ++ +I+ F F ++ Sbjct: 69 STIVSGIQGQSSSISQALIGFLSGLTSNIG-NIFSSLMNAFLIIVFTFSFLSSKEHLAAM 127 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII----AIGEGLVLGSAYWLAGVPSHVA 243 L + P + +V T+ +I A+ G+++ Y + G+P V Sbjct: 128 TSRLLKVFLPEKVVIKLTYIGQVALETYDQFLMIQLIEAVIIGVMIAVGYSVFGIPYGVM 187 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G+ +++ IP P+ V + + A L + I + P +VG Sbjct: 188 TGIFAGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQ 247 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I LP + T G GLLG+ + A+I + KE ++A + + Sbjct: 248 SIGLPAIFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQLD 298 >gi|255532211|ref|YP_003092583.1| hypothetical protein Phep_2317 [Pedobacter heparinus DSM 2366] gi|255345195|gb|ACU04521.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 377 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 139/347 (40%), Gaps = 18/347 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ L + + + + +I L PV+ A I PI+ K Sbjct: 1 MKDMPLTVRRSIELLGIALIGAILVIGNDIIMPVIMAFFISIVLLPIFRFLKKHKF--PE 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWA 119 +A+I + ++ +F+ +++ F + + ++ N H + W S I Sbjct: 59 IVAIILPILLVAIFVGVIVWFFSAQIGVLVADFPQIKNNVNSHLKSLSEWFSTI------ 112 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 H+S + +K ++E G+ + + + + ++ + I L FY+ Sbjct: 113 -----SHVSTREQMKFITEKSDDLLGMAGKAASGAAVTLSSIFVFVGLLPIYIYLMLFYK 167 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + K+ +I++ +G+ I ++LG L G+ Sbjct: 168 D--ILLRFIFMWFKSDHHPKVKEAIYETEAIIKNYLVGLLIQVTYMTILLGGILLLVGIK 225 Query: 240 SHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +GVI AI+ +IP + V + L ++ + A+ F+ + L Sbjct: 226 HALLIGVIFAILNLIPYVGALIGNIIGVLLTLTSSTELWPVITVLGVIAVVQFLDNNILM 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P +VG +K+ L G++ G G+ G+F+ ++A++ VI+ Sbjct: 286 PRIVGSKVKINALFAILGVIVGGSIAGVSGMFLSMPIIAVLKVIFDR 332 >gi|325981410|ref|YP_004293812.1| hypothetical protein NAL212_0713 [Nitrosomonas sp. AL212] gi|325530929|gb|ADZ25650.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 354 Score = 72.9 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 133/339 (39%), Gaps = 17/339 (5%) Query: 14 WMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 W+++ + L Y L P L A +I + P+ S +K T AV+ + ++ Sbjct: 14 WLVLACVAGGLIYLLSPILTPFLLAAVIAYICNPMVSYMADRKIPR-TMGAVLVMLLLLG 72 Query: 73 LFIVPLLFLFYYGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +F +L + E L+ K + + H IP DI + L Sbjct: 73 VFAALILIMVPLFEKEANRLLDKMPTYLDMLKNHVIPWLESRLDISLQPDMNVLREALSE 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H +S ++ L + GM +++ ++++ + + LF+ RD + + + Sbjct: 133 HWKSAGGVAAKMLPSLTSG---------GMAVVEFVVNLLLVPVVLFYLLRDWDMLIKLI 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + +++R +++ G + + + + WLAG+ + +G++ Sbjct: 184 DEMIPRYWHDQISQLARETDRILAEFLRGQLSVILLMSICYITGLWLAGLEFALPIGLVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIK 306 I+ +P I ++ + + + + +W + + + P+LVG I Sbjct: 244 GILVFVPYLGMIVGLMLATFAAMMQFQDWSGVITVWAVFGIGQMLEGMLITPWLVGDRIG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + F L+ + G G+ + + A++ V + Sbjct: 304 LHPVVVIFALMAFGQLFGFFGILLALPVSAVMLVWLRHF 342 >gi|288957469|ref|YP_003447810.1| hypothetical protein AZL_006280 [Azospirillum sp. B510] gi|288909777|dbj|BAI71266.1| hypothetical protein AZL_006280 [Azospirillum sp. B510] Length = 342 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 112/331 (33%), Gaps = 10/331 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +L LYF + P++ ALI+ F P+ + AV+ Sbjct: 6 LFVIAVLFMLYFGRDVLLPIMLALILSFLLRPLVRALYRVGVPEGIGAAVLVITL----- 60 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + V + + L DI G+ + ++ + Sbjct: 61 ---FGGVLLAVYTLSAPAAEWVNRMPRVLHELEFKLGDIRAGIERAREASRQIEQITQET 117 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + +I ++ FF R S+ + ++ + Sbjct: 118 GNETGPAREVVVRGPSLMEQAVSQVESVLANVVILQVLLYFFLARGRHSLEALIGTMRDV 177 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ ++ + + I + L +T+I GL G WL G+P+ GV+ A+ I Sbjct: 178 DDRVHYAMVAATLQQNIAAYLLTITLINAMLGLATGLVMWLWGLPNPALWGVLVALANYI 237 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P P T V + + T L L I L P +VG + L + Sbjct: 238 PFIGPAVMTGVLFLVSVMTFEGIGTILLPPLSFVALTTIEGNFLTPMIVGRRLALNPIAV 297 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G+ G + ++A++ +++ Sbjct: 298 FVSILFWGWLWGIPGALLAVPILAILKILFD 328 >gi|149412846|ref|XP_001513187.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 714 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 9/252 (3%) Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + ++ W K + + + L + + G L++ LS++ + Sbjct: 440 LSVSIFGHRAWPKEILESLWIVMSRNVSLLFTTVTTLVTILFYSGTALLNFVLSLVIFLT 499 Query: 173 ALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIRSTFLGMTIIAIGEGLV 228 LF+ + + + SL P I + V + IR F +A GL Sbjct: 500 TLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAIRGVFDASLKMAGFYGLY 559 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK-GNIFNATCLFLWGA 286 + + G+ + AI+ +P G + + L + G A L ++ Sbjct: 560 TWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGAGCKAILLLVFHL 619 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + VD + + GG T + GG +GL G IGP+L+ ++ V Sbjct: 620 LPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAIIGPILLCILVVASNIYS 676 Query: 347 MAIKENKEKISS 358 + +S+ Sbjct: 677 AMLVSPTASLST 688 >gi|110635434|ref|YP_675642.1| hypothetical protein Meso_3105 [Mesorhizobium sp. BNC1] gi|110286418|gb|ABG64477.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 374 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 119/352 (33%), Gaps = 32/352 (9%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + + LY ++ APV A+++G P+ ++K + A +A + Sbjct: 30 QASAIGLAIAVAIAGLYAMRFLAAPVSLAIVVGLMLSPVAQRLENRKLP-PSLSAAVAVL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++ + P+ W +P +L +LS Sbjct: 89 IFIFSVGFLVVAVAA---------------------PLTSWAGRVPEIWRELQLQLTNLS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL--------SIIFMIIALFFFYRD 180 P ++ + + G L ++IF+ FF Sbjct: 128 QPLDTIRSIREEIRNVTGESNVTVSVEDGSAMESVALLAPAVIAQALIFLASLYFFIATR 187 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L L I R V +++ + L +TII I G +G + WL VPS Sbjct: 188 NDTRLTVLRLCSGRLLRWRVAHIFRDVEELVSNYLLAITIINICLGFAVGISLWLIDVPS 247 Query: 241 HVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 G + ++ I PI+ + + +I+ + L + I + + P Sbjct: 248 APLWGAMAGLLNFIVYIGPITMAVILLGVGFASFDSIWGSISPMLIYLLINGIEAQFVTP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++G + L F + + G +G F+ + + + + + + Sbjct: 308 SVIGRRMTLNPFLVFLAITFWLWLWGPIGGFVAVPALLVFFAVARNILPGFE 359 >gi|302386575|ref|YP_003822397.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] gi|302197203|gb|ADL04774.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] Length = 410 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 115/335 (34%), Gaps = 21/335 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKE-----------ESSTFLAVIATVSVMCLF 74 + G PV+ ++ + P+Y+ + + +AT+ + Sbjct: 42 LVIGILMPVIYGAVLAYLLLPVYNKSRDLTNHILSSAWKNENGVKSVSSAMATLVSLIFL 101 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 V ++ LF+ + E+ V + + ++ + WL + A E + L Sbjct: 102 FVIVVGLFWMIIPEIYNSVMGLQESLGENINDLALWLQKMFEDNPAVE--QAVIPIYDRL 159 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCL---SIIFMIIALFFFYRDGFSISQQLDS 190 + ++ ++ + + + L L +I+ +I + + ++S Q Sbjct: 160 TSQLQNWMTSDLVPNMSMLIGSLSIGLLSVVLVLKNILIGVIVMVYLLNIKGTLSAQCKK 219 Query: 191 LGEHLF----PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + +F R V +V G + ++ G++ +P + + V Sbjct: 220 IIYSVFSVKTANRAIDEIRFVHRVFGGFITGKILDSLIIGIMCFVLLNAMKMPYALLVSV 279 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +IP P S +L++ + ++ + L P ++G Sbjct: 280 IVGVTNVIPFFGPFIGAVPSAFLILLVSPVKCLYFLIFILLLQQFDGNILGPKILGQSTG 339 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LP F ++ MG +G+ I A+ + Sbjct: 340 LPSFWVLFSILFFGGLMGFVGMIIAVPTFAVFYSV 374 >gi|237807694|ref|YP_002892134.1| hypothetical protein Tola_0920 [Tolumonas auensis DSM 9187] gi|237499955|gb|ACQ92548.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 358 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 120/353 (33%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P + + ++ +YF APVL+AL+I + + F+ + Sbjct: 10 RRRFSDPNAVTLFWLLVGGFTVIYFYGDILAPVLAALVIAY----LLEWFVQRLMHIGLG 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +T+ V+ + LL F + ++ ++ V +L +P Sbjct: 66 RKAASTLVVLLFIGLMLLVGFGILPIVFRQGMTLVKEVPTMLANATEYLKKLP---QLYP 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L +G+ + F+ M + ++ + + +FF +D Sbjct: 123 ELVDSSLVDSLSSVIQDRLLTNSGV--LVSFSFASLMNLAVVLVYMVLVPLLIFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S+ + ++ + + I + G I + V + + L G+ Sbjct: 181 DSLLVMTKRFLPY-NRELVIRVWLEMNEQIANYIRGKVIHILVVSAVNYAVFALMGINYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ + +IP GA V + L + G L L I + L P Sbjct: 240 LLLGISVGVSVLIPYIGAVAVTIPVIVVALFQWGVSPEFAYLMLAYTIVQTLDANILTPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G G+F L L+ + + + + Sbjct: 300 LFSEAMNLHPIAIILAVLIFGGFWGFWGVFFAIPLATLVKAVVNSWPGSSRTD 352 >gi|110801515|ref|YP_699897.1| sporulation integral membrane protein YtvI [Clostridium perfringens SM101] gi|110682016|gb|ABG85386.1| sporulation integral membrane protein YtvI [Clostridium perfringens SM101] Length = 354 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 125/335 (37%), Gaps = 9/335 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ ++ + I + I++ ++ +F + P L A I I K + + Sbjct: 1 MKNLIIKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNV 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMW 118 + I+T + ++ E L + + N + + + + Sbjct: 61 GLASFISTFIFFLIIVILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIE 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALF 175 + + L+ ++ I S + + F + ++ + +IF +I+ + Sbjct: 121 VNFIDNAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVISTY 180 Query: 176 FFYRDGFSI--SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F ++ +I S+ L + + I + K+ + + ++ + Sbjct: 181 FLSKELNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGF 240 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + + L VI A++ ++P G P+ + + GNIF+A LF+ I +F++ Sbjct: 241 SFLNIKYALLLSVIAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILY-IFIFLL 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + L P L+ + + L + G+ GLLG Sbjct: 300 RQFLEPKLMASTLGIHPLLILICIFIGLELNGLLG 334 >gi|260494347|ref|ZP_05814478.1| permease [Fusobacterium sp. 3_1_33] gi|260198493|gb|EEW96009.1| permease [Fusobacterium sp. 3_1_33] Length = 364 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 121/332 (36%), Gaps = 8/332 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ + V+ +FI+ L + + Sbjct: 37 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIIFVILVFIILSLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ I + +I + ++T ++ + + TN Sbjct: 97 SLKVLNDIYPYISEKAITIG---KNIANYLAEKNIYTINMDEVNNYFTNFISNNTTNITK 153 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 + + ++ + F D + + L+++ + +F Y Sbjct: 154 LASSLLGSLVDWTIGFT-NLFLAFVLAFLILLDKKHLIKTLENIIKIIFGVKNTPYIMNK 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + G I++ GL + + G P ++ I MIP I Sbjct: 213 LSLSKNIFLGYVSGKIIVSAIVGLCVYVILLVTGTPYAALSAILLGIGNMIPYVGSIIGG 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ +L++ L + AI + + P ++G + L ++ Sbjct: 273 IIAFFLILLVAPIKTIILLVAIAISQLVDGFIVGPKIIGNKVGLNTFWVIVSMIIFGNLF 332 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+F+G +M+++ + + + + ++ E+ Sbjct: 333 GIVGMFLGAPIMSILKLFYIDLLKKAEQGGEQ 364 >gi|325181860|emb|CCA16315.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 749 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 76/202 (37%), Gaps = 10/202 (4%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK---KISRIVPKVIRSTFL 216 F+ + F I +LF+ + ++ E L P + ++ + KVI F Sbjct: 336 FVSLGIRAFFFISSLFYLLC---TKWDPIERFVEDLLPIQNEKRPQVVHSIRKVIEGVFF 392 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNI 275 ++ LV ++ + +T ++++P P + ++ + + + Sbjct: 393 VPLKMSSLHALVTLISFSIVRADFVYLATTLTFFISIVPIIPPYLVCVPWALAIGVTSSF 452 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A LF I I+D L + L + +V GV G G+ GP+ + Sbjct: 453 IKALILFCVQYIAFTILDDMLY---EKSIVALNSYVSALSVVFGVYVFGFEGVIFGPLSV 509 Query: 336 ALIAVIWKESIMAIKENKEKIS 357 + ++ S I+ ++ ++ Sbjct: 510 CGVYFAYEVSNHGIQAAQDDVT 531 >gi|257053164|ref|YP_003130997.1| protein of unknown function UPF0118 [Halorhabdus utahensis DSM 12940] gi|256691927|gb|ACV12264.1| protein of unknown function UPF0118 [Halorhabdus utahensis DSM 12940] Length = 336 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 108/331 (32%), Gaps = 25/331 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + I L+++ L F V A+ + + +P+ ++ A ++T Sbjct: 9 VLAGLFGAISLLAILTLWSVFWTVFFAITVAYVLYPVRRRLAAR-GLGPRVAAGLSTAVA 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L L Y + + D+P + L H Sbjct: 68 FVGALGVLAPLGYAVYVRRSAFF--------------DMVGDLPPEFSITVLEMSHTIDV 113 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ + + A L ++ ++ ++ Sbjct: 114 TTVVDVVRETAGS--------MALDAASAAPVLALKFFLFVLLVYALLLKPRMPARAARR 165 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + + ++ +G ++ ++L G + V L V++ + Sbjct: 166 VVPAEYHDVVQALHERLRDTLFGLYVLQGATGVGTFVIALPVFFLLGYDAAVTLAVLSGV 225 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLP 308 + +P P V + + A L + D +RP L LP Sbjct: 226 LQFVPIIGPSVLIGVLVLTEVLAENVTAAILVGVVGFVFVAGLPDVLIRPRLSAVAADLP 285 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 F G GGV +MG +G+ GPV++AL+A Sbjct: 286 GSLYFIGFTGGVLSMGAIGIIAGPVVVALLA 316 >gi|327540823|gb|EGF27384.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 394 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 121/328 (36%), Gaps = 10/328 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ L +LY + F P+L A + + + + S A +++ +F Sbjct: 49 FLTLYALYIGRNLFMPILVAG-FAYLTLRPVVRAMGRIGIPSGVAATAIMLAIATVF--- 104 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + Y ++++ +V + ++ D + + + +++ Sbjct: 105 -GTIGYVLSGPAQDMLQQVPGSMPEVKEKLGFIFDHLETVNQATEDISDTADKENITSEE 163 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + S + + LFF G S+ + S Sbjct: 164 KP-VPVEIKQPAWTTTSPLIAGTGNAVSFVSIAAALLFFLMAAGDSLIVSVVSSLPSFSS 222 Query: 198 AY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ V + S +T I G+ +G+A WL G+PS + GV + IP Sbjct: 223 KRRFIEVLEGVQDALSSYLAWVTCINACLGVCIGTAMWLLGMPSPLLWGVAAMFLNFIPI 282 Query: 257 GAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + A+ + L+ + A + A + + + P L+G +KL + F Sbjct: 283 VGAMVGIAMVFFVALVSFEHASFAFVVAGTYATLTTLEGQFITPTLLGKSMKLSSVLVFI 342 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 +V G+LG+F+ P+L+A++ V+ Sbjct: 343 SIVIWGWMWGMLGVFLAVPILIAVVMVM 370 >gi|291299126|ref|YP_003510404.1| hypothetical protein Snas_1608 [Stackebrandtia nassauensis DSM 44728] gi|290568346|gb|ADD41311.1| protein of unknown function UPF0118 [Stackebrandtia nassauensis DSM 44728] Length = 371 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 104/301 (34%), Gaps = 21/301 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L A + P+ + + V+ + L+ + + E+ Sbjct: 62 LIVILVAGFLAIGLNPLVTRIQGW-GMPRGLAVATVCLGVLLIVCGGLMSIVPAIITEVT 120 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK----TNGI 146 + V + QH ++ + W K+L L ++ LK + + Sbjct: 121 KFVEAIPGLVQH---------------YSEQEWLKNLDKKYHLLDQAQEALKGIKPSTVL 165 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + A G + ++ ++ ++F + L + + + Sbjct: 166 EAAGGLAGVVGGVVGSVFDGVMISLLTIYFLVSF-DRLKGGFYKLLPAPRRQRAQALGDV 224 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + + +G I G+ + AGVP +AL + AI+ +IP V Sbjct: 225 ILAKVGAYTVGALGIGATAGVCSYVFMFFAGVPYAIALAFVVAILDLIPQIGATLGAVVV 284 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + +++ A ++ I + + + P ++ +K+ L G++ G MG++ Sbjct: 285 TLVGLTVSVWVALACAIFFIIYQQLENWVIYPTIMRRSVKVSDLAAILGILIGAGLMGVV 344 Query: 327 G 327 G Sbjct: 345 G 345 >gi|312869471|ref|ZP_07729627.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094979|gb|EFQ53267.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 371 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 115/345 (33%), Gaps = 26/345 (7%) Query: 16 IMFIILVSLYF-------LKGF-------FAPVLSALIIGFTSWPIYSSFIS----KKEE 57 ++ +I ++ + F F P++ + + + PI + + Sbjct: 14 LLLVIAALIWVCTKIQFIFQPFLTFISVVFVPLILSGFLYYMLNPILKLLLKVRLGRFRL 73 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGG 116 + +++ + ++ + L L + E+ LV+ + A+ + + P Sbjct: 74 NRGVASLLLVLMLILIICGGLAMLIPPVVKEITSLVTHLPQTASGLQRLLNDTIQHSPLK 133 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + H L ++ LK + + + I + + LF+ Sbjct: 134 NIDLTAYYRQFDH--QLANYAQVVLKG-----LSSRIGDVINAVTNITVVTITVPVMLFY 186 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + + ++ + + S G I + + Y L Sbjct: 187 MLKDGSKLGPSIQKWLSPHHAKEVDQLLGKMNDTLSSYIAGQVIECLFVAVFTSLGYLLI 246 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P + LG++ + +IP P A ++++ + + + + I + Sbjct: 247 HQPLALVLGIVAGLCNIIPYIGPYIGIAPALFVSLTMAPQKLILVIIVVIVVQQIDGNVI 306 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P ++G +++ L L+ G+ G+ + A++ I Sbjct: 307 YPNIIGKTLQIHPLTIILLLLAAGHIAGIAGMILCIPFYAVLKTI 351 >gi|165976179|ref|YP_001651772.1| putative permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307249977|ref|ZP_07531949.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|165876280|gb|ABY69328.1| putative permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306858037|gb|EFM90121.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 353 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 118/354 (33%), Gaps = 15/354 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 ++ +PQ + I+ I +YF P+L A++ + WPI K Sbjct: 10 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPR-- 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + V+ FI FLF + + + V+ + + WL +P Sbjct: 68 ---LLSLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPE 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S LK F ++ + S G+ + + ++ FF + Sbjct: 125 LIDYAMLDSLMNMLKEKILGFGESLLALSVNSIISLVGLGIYAFLVPLMV-----FFLLK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + I + G + + G+V + + + Sbjct: 180 DKPLFVRGFIKFLPK-NRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAIFLFFDLR 238 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V + +IP GA + V++ L G + L L I + + Sbjct: 239 YPLLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVV 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PFL + L L ++ G G+F L L+ + +E Sbjct: 299 PFLFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 352 >gi|119510172|ref|ZP_01629311.1| hypothetical protein N9414_00910 [Nodularia spumigena CCY9414] gi|119465233|gb|EAW46131.1| hypothetical protein N9414_00910 [Nodularia spumigena CCY9414] Length = 382 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 118/339 (34%), Gaps = 17/339 (5%) Query: 13 RWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+ + I++SLY L + + +A+++ T + F V++ V Sbjct: 5 QWIGLIAIVLSLYILWQIRQVLLLIFAAVVLAVTLNRLAKRIQG-FGVRRGFAVVLSVVL 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +EL +V Q W+ + ++ Sbjct: 64 FFVGVVCFFWLIVPPFAQQFQELTYRVP---QGFDRFNSWIQRL--ETLIPNQLVPYIPD 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L ++ FL I + F L+ L I+ +++ F + + + Sbjct: 119 FNHLIAQAQPFLNQ-----ILGNSFAFVSGSLEVLLKILLVLVLTGMFLAEPQAYRKLFI 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + G I G++ + GV + +ALGV+ Sbjct: 174 RLFPSFYRTKVDGILDKCELSLERWITGAFIAMSVVGILSVIGLSVLGVKAALALGVLAG 233 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP G +S L+ + +F+ + I + P ++ + L Sbjct: 234 FLNLIPNLGPTLSLIPAMAIALLD-TPWKPLLVFILYFVVQQIDANLVTPTIMANRVSLL 292 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + V G LGLF+ + + ++A IW E ++ Sbjct: 293 PAVTLISQLFFVTFFGFLGLFLA-LPLTVVAKIWLEEVL 330 >gi|256395388|ref|YP_003116952.1| hypothetical protein Caci_6257 [Catenulispora acidiphila DSM 44928] gi|256361614|gb|ACU75111.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 389 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 100/312 (32%), Gaps = 21/312 (6%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + S + A +A +++ + ++L +++ + + + Sbjct: 95 RRLTGRIR-SRSLAAGVAC-ALLAGVVGGTVWLVARAVVDAAPGIGRALG---------- 142 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 +S G +L + +SL + + L + + L Sbjct: 143 RISRRVGAGSEEDLLQSAANGLRSLGSEANSALIAGVVHGVSTAVQILAGSVLS------ 196 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++ ++F RDG +++R + G T IA+ + ++ Sbjct: 197 --VVLIYFLIRDGGRFEAFASRSLPEGTADVAVRMARRAWDALSGFMRGTTFIALIDTVL 254 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAI 287 + + GVP L + + A IP AV++ + + G + A + Sbjct: 255 ILIGLLVLGVPGAPGLAALVFVGAYIPFIGAFLSGAVAVLVALGDGGVGKALWVLGVVVA 314 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + L+P + + L + GG G+LG + L A + + E Sbjct: 315 VQVVEGNVLQPVIQSRTVSLHPAVVMLAVTGGTAVAGILGALLAVPLTAAASGVLAELRE 374 Query: 348 AIKENKEKISSN 359 + E ++ Sbjct: 375 MAGRSGESSEAD 386 >gi|325125970|gb|ADY85300.1| permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 377 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 85/247 (34%), Gaps = 7/247 (2%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L+ + + S +L+ G + + + + F +I + Sbjct: 127 LESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIFAIY 186 Query: 177 FYRDGFSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 F DG I+ L +L K + G I A GL++ A Sbjct: 187 FLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRAFSGYIRGQIIDAFIVGLLVSLA 246 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +A VP + +G++T + +IP PI + I A + + + + + Sbjct: 247 MLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAI 306 Query: 293 D-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D L L+ I + L ++ G G +G+ I + AL+ ++ I ++ Sbjct: 307 DGNILNHKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAYRQK 366 Query: 352 NKEKISS 358 EK Sbjct: 367 QLEKSKE 373 >gi|118471020|ref|YP_884664.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172307|gb|ABK73203.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 379 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 122/360 (33%), Gaps = 20/360 (5%) Query: 3 ETMLNPQGIMRWMIMFI---ILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKE 56 ++ W ++ I I+ L+ +K F PV A ++ P F+ ++ Sbjct: 12 SPLVRKAAAWSWRLLIIGGAIVALLWLIKRLEILFVPVALATMVAALLLPAVD-FMDRRG 70 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + + + L F+ + +LV ++ + V WL D P Sbjct: 71 APRGSAVALVLLGGIAVVGGILTFVVTQFIQGAPDLVEQMTRSIDG---VRNWLIDGPLH 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + + ++L+ E + A + + + L F Sbjct: 128 LSKEQIDSAGNTAIEALQRNQEK---------VTTGALSTAGTLTELLTGAVLTLFTLIF 178 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + G +I + + R + ++A+ + + +G+ + Sbjct: 179 LLQGGRNIFAFVTKAFPEDVRERVRDAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIM 238 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P + L + + A +P GA I+ + L+ + A + Sbjct: 239 GIPLALPLASLVFLGAFVPLVGAVIAGFLAVVVALLAKGLVYALITLGLIIAVQQLEGHV 298 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+P ++G + + L + GG G++G + +A + + + +E+ Sbjct: 299 LQPLVMGRAVSIHPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSATRVLLARDPHAEEE 358 >gi|240145907|ref|ZP_04744508.1| putative transporter [Roseburia intestinalis L1-82] gi|257201972|gb|EEV00257.1| putative transporter [Roseburia intestinalis L1-82] Length = 254 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 2/210 (0%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L + D + S + + ++ +IA F + I L + + Sbjct: 44 LMSGISDGVIDGVSGMAAGIPGFFMKLLIAVIATVFMELEFPEIKAFLKRQIPAEYQRAF 103 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + V + L +I L + +L G+ + A+ I A++ ++P G Sbjct: 104 RDGKNYVTGTMGKCILSYCLIFGMTFAELTAGLFLLGIKNAFAIAFIIAVLDILPVLGTG 163 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ G I +F + + +V + P LVG + L + ++ G Sbjct: 164 TVLIPWAVLAFASGRISTGVGVFGLY-LVITVVRNLIEPKLVGKQMGLSPVIMLPCMLIG 222 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ G++GLF+ P+L++ + + I+ I Sbjct: 223 LKFFGIIGLFVVPLLVSFLKQLNDRGIIKI 252 >gi|227533850|ref|ZP_03963899.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188486|gb|EEI68553.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 367 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 127/363 (34%), Gaps = 27/363 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + Sbjct: 15 EKFINNLPVRRTVVLFSVFLLLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHIRP--- 71 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWAS 120 + +VP+ L G++ ++ G+ V + + Sbjct: 72 ---------FVIVVPVYILVILGLVYAAVHYVPAIIHQTIGLFNSVQNFYNSEAFANNQV 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + +L +T G+ + ++A G + L +S I FFF + Sbjct: 123 MQWVLQSTKSLNLTEQLKT-----GVTTVLQYAGNIGAMGLTLFVSFILS----FFFTIE 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAG 237 S+ + F Y+K + K I + IA+ ++ Sbjct: 174 LDSLPAFGQLFLDSPFGWYFKDLQYFAMKFINTFGVVMEAQIFIAVVNTVITTITLLFLK 233 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P+ +L ++ ++++IP GA IS ++I G + + + A + L Sbjct: 234 MPNTPSLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVLTILIMIAAIHVLEAYVL 293 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P + +LP TF L+ R G GL +G + + +A +K+ Sbjct: 294 NPKFMSSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVLGVKKIAGTAHKQST 353 Query: 357 SSN 359 ++ Sbjct: 354 YAS 356 >gi|91793712|ref|YP_563363.1| hypothetical protein Sden_2360 [Shewanella denitrificans OS217] gi|91715714|gb|ABE55640.1| protein of unknown function UPF0118 [Shewanella denitrificans OS217] Length = 406 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 106/315 (33%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +IL + P + + + P +++ ++ ++ + Sbjct: 20 LVVILAGIKAASPIVVPFVLSAFLAVICNPA-IVLMTRCRLPKWLAVMLLMAFIVLM--- 75 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+L + E +++ + Q I W+ + +++I Sbjct: 76 -GLWLTSLVGRSVNEFSTQIPVYRQQLIEQFSWIIE--------------RLQGFNIQIS 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L + + ++ +I+ + F + S+ +++ L Sbjct: 121 QQKVLDYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKV-HLAMDDP 179 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 K+I R + V + + ++++ ++G + GV + V+ + IP Sbjct: 180 DMRLKQIDRFLQSVNQYMVIKT-LVSLATAFIVGLGLSIIGVDYALLWAVLAFLFNYIPN 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + LI+ A L ++ + P +G + L L F Sbjct: 239 IGSIIAAIPAVLLALIQLGPAAAGGTALLYLGTNMVMGNVVEPKFMGKGLGLSTLVVFLS 298 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 299 LIFWGWLLGSVGMLL 313 >gi|182624155|ref|ZP_02951942.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|177910771|gb|EDT73131.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 391 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 99/323 (30%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA------VIATVSVMCLFIVPLL 79 +K + A ++ E S + TV+++ L Sbjct: 41 LVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVTIIVLVGAISA 100 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +V + +++ + + + + T Sbjct: 101 IILFVVPQLTSSVVKLTESIPTYLKSFEVNMNNYADSTVLLSKVWDQVMNTWQEILKTVT 160 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +D+CL+ + I L + I + + + Sbjct: 161 HLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKKVMYAYIRGDIADK 220 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I + +V +G A+ G + + +P + V+ ++IP Sbjct: 221 ILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISVLVGTTSLIPILGA 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T S +L+ N A ++ + + P +VGG + L L ++ G Sbjct: 281 FIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVGLSSLWVMLAIMIG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +G+ +G A+I ++ Sbjct: 341 GSAFGFIGMLVGVPTAAVIYCVF 363 >gi|158320696|ref|YP_001513203.1| hypothetical protein Clos_1667 [Alkaliphilus oremlandii OhILAs] gi|158140895|gb|ABW19207.1| protein of unknown function UPF0118 [Alkaliphilus oremlandii OhILAs] Length = 411 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 111/338 (32%), Gaps = 4/338 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++ S L +P L A+II + P + +K + I + Sbjct: 77 VFCVILLFQSGTVLYDVISPFLYAIIIAYIFNPFVNYIENK-GIQRIWAVFIVYFIISGG 135 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +V L L E++ L+ + N E + + Sbjct: 136 VLVFSLSLLPKMTAEIRRLLDSL--PNLKEGSFGYIYDKYINYNNIIENLPVEFQGVKDI 193 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L L+ + + + + + L+I+ I F+F +D + L L Sbjct: 194 LKLDNRKLEEIILKILSSVTNSV-IGVVSKLLNIVITPILAFYFLKDKEKFKKMLILLIP 252 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 F +S+ + V+ G I+A G++ + V V +G++ + Sbjct: 253 KYFRKGIIDLSKDIDGVLGGFIRGQLIVAFIIGVLTTIIMMILRVEFAVLVGIVAGFADL 312 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP PI I G + + + + + P ++ + + + Sbjct: 313 IPYFGPIIGIIPGIIFASFGGLNKVLWVIVLFFVIQQAESSIISPKIISDKVGIHPIVVI 372 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G + G+LGL I +I VI K I I Sbjct: 373 LALIIGGKFFGVLGLLIAVPAAGIIKVIGKHFINYIAN 410 >gi|238917949|ref|YP_002931466.1| putative permease [Eubacterium eligens ATCC 27750] gi|238873309|gb|ACR73019.1| putative permease [Eubacterium eligens ATCC 27750] Length = 432 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 126/344 (36%), Gaps = 29/344 (8%) Query: 31 FAPVLSALIIGFTSWP----IYSSFISKKEE--SSTFLAVIATVSVMCLFIVPLLFLFYY 84 +P L +I +P +Y+ F S +++ + + + L + Sbjct: 86 LSPFLIGAMIALVLYPFIKTLYNRFFMGVCHIKSRKAAKMLSILVAYLIAVGAFAILIGF 145 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF---- 140 + ++ + ++++ P W +I W +E KH + +++ Sbjct: 146 VVPQIYKSITEIAN------QAPVWYENI--RNWFTEFEDKHANSSIDYNFINQKIEDAL 197 Query: 141 -----LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T+ + + + M L L+++ II + D +I + Sbjct: 198 PKLVDYMTDALTNMVPYILNTSMAILSGVLNLVIAIIVSIYMISDNKNIFYHFKRFLYAV 257 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTII----AIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P +RI+ K S F+ I +I ++ + +P V + VI I Sbjct: 258 LPKKTADNTRIICKNCASIFINYIIGKSFDSIIVMIICFIIMLILKLPYAVLISVIVGIT 317 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKLPFL 310 MIP P + +++ + +F+ + + VD L P ++G L + Sbjct: 318 NMIPYFGPYIGGVIGGVIIVIASPIK-LIIFVIMIVCIQQVDGLLIGPRIIGSTTGLKPV 376 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F + G G++G+F+G + A+++ + ++ + ++ Sbjct: 377 WVVFSITVGGALFGVIGMFLGVPVFAVLSYLLNITVQHFLDKRK 420 >gi|47092709|ref|ZP_00230495.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|47018897|gb|EAL09644.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] Length = 333 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 26/353 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R + +I LY L+ +L I + + + + + + ++ V + Sbjct: 1 MRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLLLYVLI 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I + ++ +LV + Sbjct: 61 AAVIIFVFVKYIPVLADQINQLVKFGNTFLTT---------------------DSNNDFI 99 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L+ F + + +++ ++ FF + + Sbjct: 100 NYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFTNQ 159 Query: 191 LGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +++ IIA+ ++ A W+ G P + L ++ Sbjct: 160 FSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIM 219 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 220 VFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTN 279 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ + I++ K+ IS Sbjct: 280 LPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTISH 332 >gi|259416188|ref|ZP_05740108.1| membrane protein [Silicibacter sp. TrichCH4B] gi|259347627|gb|EEW59404.1| membrane protein [Silicibacter sp. TrichCH4B] Length = 380 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 121/356 (33%), Gaps = 28/356 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I V ++ L P + I + P+ AVI +V+ Sbjct: 14 LAAVIFAVIMWALGNVLMPFILGGAIAYIIDPLADRLERAGLSREGATAVITVGAVLIFL 73 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I+ LL + + +M +LV + A + + P + + L+ Sbjct: 74 IM-LLLIVPALINQMIDLVQTLPQAMSNLRSFAQ--EHFPSLFEDNSQVREALAGLW--- 127 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ + + F M L+ + ++ + + + D + ++D L Sbjct: 128 ----KIVQDKSVTLLQTFVGS-AMSLLNIVVLLVIVPVVAVYLLVDWDRMVARIDDLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++R + +V+ S GM ++ + G A L G+ +A+G + ++ I Sbjct: 183 DHAPVVRHLAREIDRVLSSFIRGMGMVCVILGSYYAVALMLVGLNFGLAVGFVAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLLIKGNIF---------------NATCLFLWGAIELFIV--DKTLR 297 P I ++I L + + G + + L Sbjct: 243 PYLGAIIGGVLAIGLALFQFWGAVEGADGEMIRQGTDWLRIALVAGIFVIGQMVEGNFLT 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P LVG + L + L G +G+ I + A+I V+ + ++ ++ Sbjct: 303 PKLVGNSVGLHPVWLLLALSVFGALFGFVGMLIAVPVAAVIGVVARFAVDQYLHSR 358 >gi|34763767|ref|ZP_00144684.1| Permease [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886461|gb|EAA23719.1| Permease [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 344 Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 118/327 (36%), Gaps = 8/327 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V+ +F + L + ++ Sbjct: 19 KDYFMTIIMSIFIAILLEPIVKYLKRKSKINDILAISLSIAFVVLIFTI-LSLIVIPEII 77 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++++ + ++ + ++T ++ S TN Sbjct: 78 SSLKVLNNIYPYISEKATTMG--KNLVNYLAEKNIYTVNMDEVNSYFTNFIANNVTNIRK 135 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 + + + ++ + F D +++ L+++ +F Y Sbjct: 136 IVSALFGSLVDWTIGFT-NLFLAFVLAFLILLDKKHLTKTLENIIIIIFGVKNTPYIMNK 194 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ ++ + G I++ GL + + G P V+ + MIP I+ Sbjct: 195 LKLSKEIFLNYVSGKLIVSAIVGLCVYIVLLVTGTPYAALSAVLLGVGNMIPYVGSINGG 254 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ L++ L + I + + P ++G + L ++ Sbjct: 255 IIAFSLILVVAPIKTIVLLIAITISQLVDGFIVGPKIIGNKVGLNTFWVMVSMIIFGNLF 314 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+F+G ++++I + + + + A + Sbjct: 315 GIVGMFLGTPILSIIKLFYVDLLKAKQ 341 >gi|218439721|ref|YP_002378050.1| hypothetical protein PCC7424_2772 [Cyanothece sp. PCC 7424] gi|218172449|gb|ACK71182.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 353 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 134/351 (38%), Gaps = 21/351 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLS----ALIIGFTS-WPIYSSFISKKEESST 60 L+ ++R++++F +L +F +L A I+ F +P++ Sbjct: 17 LSTNNLVRFLLLFASGWALITFLDYFQDILFIFSVAGILAFCLNYPVH-YLERYLG--KG 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + I L L ++++L ++ ++ + P Sbjct: 74 LARGIVIFLSLLVVIGGLAALIVIAFFQLQQLFDSLIQNLENIY------NSAPSWQKIQ 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L+ + I + + L +IF+++ FF + Sbjct: 128 NFLIQRNIDID-LRPFIDNITSEISSGLISFLNLLT--LLPNTFLGLIFILVISFFMLTN 184 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + L KK+ + + K F G I+ + L+ A+ L +P+ Sbjct: 185 GERLWDLFLLLVPQ---QERKKVEKAIQKSFIGFFRGQLILCLSLSLLSFLAFLLLQIPN 241 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 AL +I AI+ IPG GA + +S+ +++G +A + + I I D + P Sbjct: 242 AAALAIIVAILDTIPGIGATLGVIVISLITIVQGGWIDAIKVVIISIILQQIQDNYIAPK 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++G + L + FF L+ G + G++G+F+ + +I + + M Sbjct: 302 VMGNTVNLNPVIVFFALMVGAKIAGIIGIFLSIPVAGVIVSLLEIDEMKSD 352 >gi|326390153|ref|ZP_08211714.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] gi|325993801|gb|EGD52232.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] Length = 341 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 126/349 (36%), Gaps = 20/349 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKEESS 59 + + ++F+I+ ++ L F +P + +I + P+ K S Sbjct: 2 QVKKVYLLFLIIGAIGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPM-----VKFFNSK 56 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F ++ + V + + +LF +Y + L++++V+ + + L I + Sbjct: 57 GFSTFLSILLVFLIVALVILFFSFYI---LPLLINEIVIFVKMIPFYTKELQKILIQLKF 113 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L F S L + +I + I F+ + Sbjct: 114 NYFSYLPPQFEKVLDKNLNALNNLFASRVDLVFKSTVA--ILKDIIDVIIVPIITFYLLK 171 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++++ + + + + + + K++ ++I + L V Sbjct: 172 DKNVFEKEIERMIPSKYHDSFFALLKKIDKILSKYIRAQIYLSIFVAIFTSIGLSLIKVK 231 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G++ I+ +IP PI ++ + + ++ L + I + + P Sbjct: 232 YAFLIGILAGILNIIPYIGPILSIIPAVLIGLLDSLSKGFWALLVCLLVQQIENAFITPK 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A+ VI E + Sbjct: 292 IISDSVGLHPITVIFSLIAGEELFGVWGLLLSVPVVAIGKVIVTEIFIE 340 >gi|169824322|ref|YP_001691933.1| hypothetical protein FMG_0625 [Finegoldia magna ATCC 29328] gi|303234057|ref|ZP_07320706.1| putative membrane protein [Finegoldia magna BVS033A4] gi|167831127|dbj|BAG08043.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] gi|302494982|gb|EFL54739.1| putative membrane protein [Finegoldia magna BVS033A4] Length = 395 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 104/297 (35%), Gaps = 22/297 (7%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L +I+ + P+ F +K +F +I V V+ L I+ + + + ++K Sbjct: 75 INTLLIGIILSYIINPLVKYFENK-GIRRSFAILIIYVIVIFLIILLGMIVVPQTIQQIK 133 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF-- 148 +++ I +P +++DI + ++ K ++ + ++T Sbjct: 134 KMI----------ISLPGFMADI--SIKVNDFNRKIFKEYPNVSKIMSNAMQTVNQKLGT 181 Query: 149 -------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + L II + + F+ D + + + Sbjct: 182 IQTSILDMLSQTGNITGSIFTNLLRIILIPVVSFYMLLDKEKCIDFIMGFIPNKNKDKFL 241 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + K G I+AI G++ A + V + +G++T + +IP P Sbjct: 242 SVCNDMDKAYSEFIRGRLIMAIFVGVLTAIALIIMRVDFAIIIGILTMVGDIIPYIGPFI 301 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L + A + + ++ + L P L+G I + L L+ Sbjct: 302 AVTPAFILAFLDSPIKAVVVVIVFVSIQWVENNILAPKLLGSKIGINPLLVIVSLII 358 >gi|163845609|ref|YP_001633653.1| hypothetical protein Caur_0006 [Chloroflexus aurantiacus J-10-fl] gi|222523308|ref|YP_002567778.1| hypothetical protein Chy400_0006 [Chloroflexus sp. Y-400-fl] gi|163666898|gb|ABY33264.1| protein of unknown function UPF0118 [Chloroflexus aurantiacus J-10-fl] gi|222447187|gb|ACM51453.1| protein of unknown function UPF0118 [Chloroflexus sp. Y-400-fl] Length = 386 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 123/356 (34%), Gaps = 17/356 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ + + L+ + P + A+I + P+ + + Sbjct: 17 ISSALIVVLTIWLLFAVTHILPPFIGAIITAYLFNPLIGWLHRRTRIGRAIW-------I 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L+IV L+ +V + + + R L+ E+ +S Sbjct: 70 IVLYIVAFFVLYSLFTALWPRIVQQSRDLAANAPVIIRELTIFFEQNQTIEVGDFVISLA 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + ++ + L+ + ++ +I F+ + S Sbjct: 130 PLEAQVIG--LIRDVAGWLSGNVPKIVFSALESVIYLLVYLIITFYLLLQAPQLKAWSRS 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + +V + G I+ + ++L + VP + + V + + Sbjct: 188 LIPAPYRREIGHLGYQIDRVFSAYIRGQLILIVIMSVLLYIPLSILQVPYALVIAVASGV 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++P P S +++ + + N+ A L + + I D + P ++G Sbjct: 248 LEILPIIGPWSAAGIAMTVALFQPVTPFGLSNVALAVLLGIIYFVLRQIEDHFIIPNVMG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++L F ++ G G GLFI + A+I ++ + + E S Sbjct: 308 PLVRLHPGVVIFAILAGGALAGAFGLFISIPIAAVIRILLSYIYRKLTDQPETPSD 363 >gi|241760550|ref|ZP_04758643.1| putative membrane protein [Neisseria flavescens SK114] gi|241319054|gb|EER55556.1| putative membrane protein [Neisseria flavescens SK114] Length = 356 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 10/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ + LY L P + A ++ + P+ K ++I Sbjct: 13 IIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWL-QLKRIRRAPASMIIMAFA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ + + WL+ + G + Sbjct: 72 LLVLLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKLLPWLNSVSG-----DYIQIDQES 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L ++IP + G + ++ + + L++F D S + Sbjct: 127 IIAWLQSHTDELSNTLKEWIPTLMRQSG-NVISGVSNLALLPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKL 307 I+ IP + ++ + L +W + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATIAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ G L A+ VI +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVILRE 342 >gi|269118863|ref|YP_003307040.1| hypothetical protein Sterm_0224 [Sebaldella termitidis ATCC 33386] gi|268612741|gb|ACZ07109.1| protein of unknown function UPF0118 [Sebaldella termitidis ATCC 33386] Length = 345 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 104/316 (32%), Gaps = 18/316 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A +I + P K +I VM +FI +L L + + Sbjct: 41 LIPFILAFVITYVLEPAVEFLEKKLNFKRMSAFMIVYFVVMFVFIAMVLALIPEVVNQFN 100 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++S ++ +K++ H LK +I Sbjct: 101 SMISFIINHQ----------------GEIQLKVSKYIEHSHINISEIVYKLKEWFFRYIF 144 Query: 151 RFASRFGMIFLDYCLSIIFMI-IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + G+ + SI+FM I LF +D S+ +L I R + Sbjct: 145 SLLNS-GISLIKAFFSIVFMTPIFLFLLMKDYRSLKMKLKLRILEADRRDIIIIMRNIDV 203 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 V+ G I G ++ + + G+ + I + +IP P+ + Sbjct: 204 VLGKYVKGKLIDCFLVGTLVYIIFSILGLKFALLFSFIIGVTNLIPYVGPVIGAIPACLF 263 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + + + + L P++ +++ + T L+ G G++G Sbjct: 264 ALLQSFNIFIGVLIAIVFIQTLESVFLVPYITSKTVEIHEITTLLVLLIGGSLFGIIGAL 323 Query: 330 IGPVLMALIAVIWKES 345 + + +I VI++ Sbjct: 324 LAIPVYLVIKVIYEYY 339 >gi|168204576|ref|ZP_02630581.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|170663763|gb|EDT16446.1| putative membrane protein [Clostridium perfringens E str. JGS1987] Length = 391 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 99/323 (30%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA------VIATVSVMCLFIVPLL 79 +K + A ++ E S + TV+++ L Sbjct: 41 LVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVTIIVLVGAISA 100 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +V + +++ + + + + T Sbjct: 101 IILFVVPQLTSSVVKLTESIPTYLKSFEVNMNNYADSTVLLSKVWDQVMNTWQEILKTVT 160 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +D+CL+ + I L + I + + + Sbjct: 161 HLFGGLASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKKVMYAYLRGDIADK 220 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I + +V +G A+ G + + +P + V+ ++IP Sbjct: 221 ILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISVLVGTTSLIPILGA 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T S +L+ N A ++ + + P +VGG + L L ++ G Sbjct: 281 FIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVGLSSLWVMLAIMIG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +G+ +G A+I ++ Sbjct: 341 GSAFGFIGMLVGVPTAAVIYCVF 363 >gi|315281657|ref|ZP_07870234.1| membrane protein YdbI [Listeria marthii FSL S4-120] gi|313614693|gb|EFR88260.1| membrane protein YdbI [Listeria marthii FSL S4-120] Length = 348 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 115/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFILLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRIRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V + ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAIFLYIAIVHFLPILIDQISQLVDSLVKIYNN--PSDNTIVQWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVATFGVVLEAQLMIALVNTVITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYTVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|315498797|ref|YP_004087601.1| hypothetical protein Astex_1784 [Asticcacaulis excentricus CB 48] gi|315416809|gb|ADU13450.1| protein of unknown function UPF0118 [Asticcacaulis excentricus CB 48] Length = 352 Score = 72.6 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 9/246 (3%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 V N +P + + + ASE L +L + L + Sbjct: 91 VRQTNNLSRELPEAWAQLQERLRASEAGATVLDQINNLGQQASGVL---------SLVPK 141 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 +++ +++A F S + L + + K +R Sbjct: 142 IAGEIASSIANLVVVVVAGIFMAMHPRSYRDGVVRLFPKSQKDRVRDGLNLSGKALRLWL 201 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 LG + G + +AGVPS ALG+++ + +P P+ + L N+ Sbjct: 202 LGQLFSMVLVGSLTAIGLSIAGVPSAGALGLMSGLAQFVPIVGPVVSAGPGLLLAASENM 261 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + + P + +P + T F ++G +G LG+ L Sbjct: 262 TTFIAALVIYVGVSQLESNIITPMVQKHVAAVPTVITLFAVLGFGSLLGPLGVLFATPLT 321 Query: 336 ALIAVI 341 + + Sbjct: 322 VVAHTL 327 >gi|167464196|ref|ZP_02329285.1| hypothetical protein Plarl_16844 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381973|ref|ZP_08055921.1| hypothetical protein PL1_1482 [Paenibacillus larvae subsp. larvae B-3650] gi|321154037|gb|EFX46367.1| hypothetical protein PL1_1482 [Paenibacillus larvae subsp. larvae B-3650] Length = 369 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 81/216 (37%), Gaps = 1/216 (0%) Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 GI + + + ++ + + + I L++ ++ I + + + ++ Sbjct: 150 GITAASNYVTGLVSVVTNFVMIVATVPIILYYMLKESDHIPDSILAAIPQKYRRDGEQTL 209 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + +G II G++L + L G+P + L V++ ++ +IP I Sbjct: 210 EEIDSALSGFIVGRVIITGLLGVMLYIGFLLIGLPYSLLLTVVSTVLNLIPYIGSILGAI 269 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + A + I I L P + G + + L T L+ G Sbjct: 270 PVLIVAFIHSPSMALWSMIVVIIAQQIESNLLSPHIYGKRLDIHPLTTIVLLLVAGDIGG 329 Query: 325 LLGLFIG-PVLMALIAVIWKESIMAIKENKEKISSN 359 +LG+ + P M +I + + E+I+ Sbjct: 330 ILGVILAIPGYMVAKIIIVRAYHLFFAGKVEEIADQ 365 >gi|325283454|ref|YP_004255995.1| hypothetical protein Deipr_1228 [Deinococcus proteolyticus MRP] gi|324315263|gb|ADY26378.1| protein of unknown function UPF0118 [Deinococcus proteolyticus MRP] Length = 469 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 123/351 (35%), Gaps = 22/351 (6%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++++LYF V A+++ P+ F F A+ + + + Sbjct: 15 ALAVLGVILALYFFSQVSASLMAVTLAVLLASALNPVVLFFERWMP--RGFAALFSVLLL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L G L M +V ++ N G +L ++ Sbjct: 73 -------LGGFIGLGALAMPPIVEQLGSVNLPGTVGEAQ-------AQLEKLAQRYPQLS 118 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ + +++ A + + +I L S + + Sbjct: 119 PLVQPERVEQFQAQLTEWLSASAGSLLDWAVKAVGLVFTGLITLVMVILALSSPAPLIGG 178 Query: 191 LGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + P + K +R + +++ + I + G ++ + + GV + + GV+ Sbjct: 179 VLGAFPPQHRTKAARALAQILVQMGAWGRATLTIMLATGAIMAAGLYFLGVKNWLVFGVL 238 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +A+ +IP PI + + + + A + ++ + + L PFL+GG ++ Sbjct: 239 SALGELIPNIGPIVSSGLPVLFTAAEDPQKALYVAIFALVFQQLEGAVLAPFLLGGAGRM 298 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G++ G++G F+ + +I +++ +A E Sbjct: 299 HPLSVTVGVLLFGSVFGIVGAFLTVPFLIVIKAVYEHFYLAGNPRPELTDE 349 >gi|240173428|ref|ZP_04752086.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length = 384 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 125/366 (34%), Gaps = 24/366 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYF------LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 ++ W ++ I +L L+ PVL ALI+ P+ ++ Sbjct: 12 PLVRKTAAWSWRLLVIFAAALAVIWVISKLEIIVVPVLLALILSALLVPVVDWLDLRRVP 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + + L F+ ++ + +LV +V + RWL + P + Sbjct: 72 R-GAAVSLVLLGGFAILGGILAFVISQFIVGLPDLVKQVERSIDSSR---RWLIEGPAHL 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 ++ + ++L+ + A + + ++ L FF Sbjct: 128 RREQIDNAGNAAIEALRNNQAK---------LTSGAISTAATITELLTGAVLVLFTLIFF 178 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G +I Q + + + R + ++A+ + + +G+ + G Sbjct: 179 LYGGRNIWQYVVKIVPVPARDRVLEAGRAGYSSLIGYVRATFLVALTDAIGVGTGLAIMG 238 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP + L + + A IP GA IS + L+ + A + L Sbjct: 239 VPLALPLASLVFLGAFIPLLGALISGLLAVVVALLAKGLVYALITLGLLIAVNQLEAHLL 298 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI----AVIWKESIMAIKEN 352 +P ++G + + L + G G++G + +A + V+ + A E Sbjct: 299 QPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAKDPAAAAEQ 358 Query: 353 KEKISS 358 E+ S+ Sbjct: 359 PEEPST 364 >gi|312887454|ref|ZP_07747053.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311300094|gb|EFQ77164.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 368 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 120/330 (36%), Gaps = 20/330 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ L+ L+ P AL+I PI + + K + +A++ ++ + + + Sbjct: 19 LILLTYILFTLQSILVPFAFALVIAILLNPICNLLMRIKLPKA--VAILTSILIAYIIVG 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++F ML + + + H L + + I Sbjct: 77 GIVFFLSMQMLHFGDTFPALQVKFAH----------------IFHDLQLWLQNSFHISIN 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L ++ L+ + + + +F F + L + Sbjct: 121 KQNELINEALNNSKALLGATLGTALNTLSVLFLIPVYIFMFLFYKTLLLNFLFEVFAEEN 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + I I+S +G+ + A ++ + GV + +GV+ AI+ M+P Sbjct: 181 SQHVRVILNQTKTAIQSYMVGLLLEAFIVAILNSVGLLILGVNYAILIGVMGAILNMLPY 240 Query: 257 GAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I A+ + + + K + + I FI + L P +V +++ L + Sbjct: 241 IGGIIAIAIPLLIATVTKDGYSTQIGIVISFMIVQFIDNNILVPRIVSSKVQINALVSIL 300 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G G+ G+F+ +A++ +I+ Sbjct: 301 VVLLGGALWGVSGMFLSIPFVAILKIIFDR 330 >gi|213018765|ref|ZP_03334573.1| hypothetical protein C1A_538 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995716|gb|EEB56356.1| hypothetical protein C1A_538 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 225 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 2/197 (1%) Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + I ++ F+ RD +I ++ + L L+ V +I + G Sbjct: 24 NLIYMVSLIAITLVVFFYVLRDWPAIVEKANKLIPILYREKAAGYFSKVDFIISNYLKGQ 83 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIF 276 + I + + G+ VA+G+++ + IP P+ +T + I F Sbjct: 84 LNVCIVMMIFYSVGLSIIGLKHSVAIGILSGTLTFIPYIGPLLYTIIGFLSAITQFSGWF 143 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 +T + L ++ I L P L+G + + G+V G +G+ ++A Sbjct: 144 ESTAVLLLFSVGQLIDSSILVPLLIGKKVHIHPTIIILGVVICTSYFGFIGILFFIPIIA 203 Query: 337 LIAVIWKESIMAIKENK 353 + +V+ + ++ E++ Sbjct: 204 MFSVLVEYAVNKYFESE 220 >gi|171911714|ref|ZP_02927184.1| hypothetical protein VspiD_11080 [Verrucomicrobium spinosum DSM 4136] Length = 633 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 111/368 (30%), Gaps = 32/368 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +R+ +++ +LYF + P+ + ++ F P+ + Sbjct: 1 MDAQQRSYLVFLRFFSALLLVAALYFAQEVLVPLALSALLAFMINPLVKLLCRCRLPR-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V V L + +F+ E+ L + + + + + G + Sbjct: 59 ---AMSVVIVTMLVFTLMGCVFWMVGKELHHLANSLPNYRHNIQERVSTVRNASEGGTIA 115 Query: 121 ELW-----------------TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 L K +S P + + P L+ Sbjct: 116 RLRTMVADISTSALDVSAGRQKQVSTPAVQPPAAPDNAASAPQPAPPPVEGGMASKILNA 175 Query: 164 CLSII--------FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 LS + +I+ + F IS ++ L + + I Sbjct: 176 SLSFLANGLGVAAVVIVFVIFMLLRQEDISHRIVGLAGFSRLTTTTRAMDEIGGRISRYL 235 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKG 273 L + + GL+L G+P + GV+ A+ IP G ++ + + L + Sbjct: 236 LMLATVNSLYGLMLAIGLAFIGLPYVLLWGVLAALFRFIPYIGPWIVAVLPIGLSLAVFD 295 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + + + L P L G + + + G LGL + Sbjct: 296 GWTQPLMVAGLIIGLELLTNMVLEPLLYGHSVGVSDFALLVAITFWTWLWGGLGLVLATP 355 Query: 334 LMALIAVI 341 L I VI Sbjct: 356 LTVCIVVI 363 >gi|169344461|ref|ZP_02865430.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169297381|gb|EDS79490.1| putative membrane protein [Clostridium perfringens C str. JGS1495] Length = 391 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 99/323 (30%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA------VIATVSVMCLFIVPLL 79 +K + A ++ E S + TV+++ L Sbjct: 41 LVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVTIIVLVGAISA 100 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +V + +++ + + + + T Sbjct: 101 IILFVVPQLTSSVVKLTESIPTYLKSFEVNMNNYADSTVLLSKVWDQVMNTWQEILKTVT 160 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +D+CL+ + I L + I + + + Sbjct: 161 HLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKKVMYAYLRGDIADK 220 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I + +V +G A+ G + + +P + V+ ++IP Sbjct: 221 ILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISVLVGTTSLIPILGA 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T S +L+ N A ++ + + P +VGG + L L ++ G Sbjct: 281 FIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVGLSSLWVMLAIMIG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +G+ +G A+I ++ Sbjct: 341 GSAFGFIGMLVGVPTAAVIYCVF 363 >gi|222053923|ref|YP_002536285.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221563212|gb|ACM19184.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 348 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 112/339 (33%), Gaps = 13/339 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFLAV 64 ++ + + +I I+ + Y L+ + L + II + P + ++ + + + Sbjct: 7 VSSRAVTAILITAAIVAAGYALRHTVSCFLLSFIIAYLLDPAVVALERRRIPRTYGIIIL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 T++++ +F + + F E L+ + Q G + + +E W Sbjct: 67 YLTLALISVFCIIYILPFTTLAWE--SLLRDLPGYVQKGKDLILGGKGELQPAFGNEEWL 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + L ++I I +FF I Sbjct: 125 WLMDTIWTNMDKLYEKLSAGVYAAAANVVFN--------LFNLILSPILVFFMLYYKHQI 176 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + S + I R + + G I+++ ++ A +L G+ + Sbjct: 177 IDECVSWLPAERSETIRAIGREINASVGGYIRGQLIVSVIVAVLSTIALFLLGIDYAILN 236 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVG 302 G+ + +++P G ++ + ++ + F+ ++P + Sbjct: 237 GIFAGLASILPFIGVILATLPPLFFAYVEFQSGVVLIKVAASFAVIYFLEGYVVKPLVFQ 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L T ++ +G G+ + L A ++ Sbjct: 297 ESMDLNPLLTIIVVMAFGELLGFWGIILAIPLAAAFKIV 335 >gi|255281982|ref|ZP_05346537.1| putative membrane protein [Bryantella formatexigens DSM 14469] gi|255267655|gb|EET60860.1| putative membrane protein [Bryantella formatexigens DSM 14469] Length = 413 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 83/259 (32%), Gaps = 12/259 (4%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 LA +++ L I ++ Y + + + V+ + L + +++ Sbjct: 121 LAFATLAAIIVLVIGLVVPQLYSCIQLILSTLPGVMEDLVEAVEKLDVLPEDVMNAFSNV 180 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + +GI + + +++ II + Sbjct: 181 DWQSRIGELVKGLL--------SGIGNVMDMVISVVSSAVSRLVTLFMAIIFAIYLLLGK 232 Query: 182 FSISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + Q L + ++ R+ +G A+ G++ L Sbjct: 233 EKLGSQAKRLMRRYMKKRPYETCLHFFSVMNDCFRNYIVGQCTEAVILGVLCTVGMLLMR 292 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P +G + A A+IP V ++++ + A ++ A+ + + Sbjct: 293 LPYAAMVGALVAFTALIPVAGAYIGAGVGAFMILTVSPAKAIIFLIFIAVLQQVEGNLIY 352 Query: 298 PFLVGGPIKLPFLPTFFGL 316 P +VG I LP L + Sbjct: 353 PRVVGSSIGLPALWVLAAV 371 >gi|225568845|ref|ZP_03777870.1| hypothetical protein CLOHYLEM_04924 [Clostridium hylemonae DSM 15053] gi|225162344|gb|EEG74963.1| hypothetical protein CLOHYLEM_04924 [Clostridium hylemonae DSM 15053] Length = 381 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 116/338 (34%), Gaps = 5/338 (1%) Query: 10 GIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + L L FF P + I F + P+ + + + + I + Sbjct: 21 SLAFSLLGTVLFIFLGVRLLAFFMPFVIGWFIAFIASPVVNWLERRLKIVKKLGSAIIII 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKH 126 V+ + L F E+ LV + + + G++ + Sbjct: 81 GVLAGLVFLLYFAGSRLWREIVSLVQNMPDLYKQLESGLSDIGKTLDGVFTILPKGIQNG 140 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + L + A F ++ I +I+ +FF D ++ Sbjct: 141 WHAIVSNLDSTVGDLMGRISEPTVTAAGNFAKKIPSVLIATIVTVISAYFFIADREAVIA 200 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + F I + +L + L GV + L + Sbjct: 201 WSKKIAPDPVVRRMSMVIDNMKYAVGGYFKAQMKIMVVVFALLLVGFLLMGVHFQILLAL 260 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A + +P G + ++Y + GN A L A+ +V + ++P LVG + Sbjct: 261 LIAFLDFLPFFGTGTALIPWALYKFMVGNYRLAIALMALYAVTQ-LVRQLIQPKLVGDSM 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L T L G + +LG+ + ++ +++ Sbjct: 320 GLNPLVTLVLLYVGYKVGSVLGMIFAVPVGMIVINLFQ 357 >gi|168214314|ref|ZP_02639939.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|170714173|gb|EDT26355.1| putative membrane protein [Clostridium perfringens CPE str. F4969] Length = 391 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 12/326 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLFLFY 83 +K + A ++ E S + +++ IV + + Sbjct: 41 LVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVTIIVLVGAISA 100 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + +L S VV + +P +L M T LS + + + Sbjct: 101 IILFVVPQLTSSVVKLTES---IPTYLKSFEVNMNNYADSTLLLSKVWDQVMNAWQEILK 157 Query: 144 NGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 AS + +D + + + + Q+ + Sbjct: 158 TVTHLFGGLASYLVGLTVDVTTAIIDFFLAFVLAIYMLSSKEKLICQIKKVMYAYLRGDI 217 Query: 201 KKISRIVPKVIRSTFLGMTII----AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + F G I A+ G + + +P + V+ ++IP Sbjct: 218 ADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISVLVGTTSLIPI 277 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 T S +L+ N A ++ + + P +VGG + L L + Sbjct: 278 LGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVGLSSLWVMLAI 337 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIW 342 + G G +G+ +G A+I ++ Sbjct: 338 MIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|116627830|ref|YP_820449.1| permease [Streptococcus thermophilus LMD-9] gi|22218143|gb|AAM94594.1|AF448502_16 epsX [Streptococcus thermophilus] gi|116101107|gb|ABJ66253.1| Predicted permease [Streptococcus thermophilus LMD-9] gi|312278395|gb|ADQ63052.1| Predicted permease [Streptococcus thermophilus ND03] Length = 378 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 107/292 (36%), Gaps = 4/292 (1%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELW 123 ++ + + ++ + + ++ + ++ ++ ++ I + WL + Sbjct: 79 VSLLLAFATIGLIFTWVVFTVLPDLIDSINTLISQDRSAINNLINWLLKNKSLQKIIQDL 138 Query: 124 TKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S L+ NG+ + ++ +SI+F L + G Sbjct: 139 GGVTQVRELINSYSAQLLQQIMNGLTNFLTSLTSLPSTLINLFISIVFSCYVLVGKEKLG 198 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ +D + + I+ R+ F+ +I A G + + P Sbjct: 199 SQVNRLVDVYLGRY-GKTFHYVVAILNNRFRNFFVYQSIEACILGTLCYIGMRIFNFPYA 257 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ AMIP + L++ ++ A + I + P++V Sbjct: 258 ATISILIGFSAMIPVLGAYIGVTIGTILIMTHSVTLALLFVAYVVILQQFEGNLIYPYVV 317 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GG LP + + G G+LG+ + + A + I K++++ ++ K Sbjct: 318 GGSTGLPVVWVILAITIGSALGGILGMLVSVPVAATLYQIVKDNVVTREKAK 369 >gi|226304691|ref|YP_002764649.1| hypothetical protein RER_12020 [Rhodococcus erythropolis PR4] gi|226183806|dbj|BAH31910.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 364 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 93/300 (31%), Gaps = 16/300 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +G ++ AL + P+ + + + + + + L+ + Sbjct: 55 RGMLILIVVALFLAVGIEPMIVWLERR-HFRRWIAVTVVLLGIAVMLALFLVAAITPLVE 113 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + ++ S H ++D+ + T L S Sbjct: 114 QGRQFASHAPELLTHIRDRYPIVNDLDEKYHLEQHLTTQLDGSGSA-------------- 159 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + + +F D I L L H I + Sbjct: 160 -LATGLLGAGRAVFSAVADAGIVAVLTTYFLIDYPRIRTNLYRLVPHSRRPRAIAIGDQI 218 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + LG +I++ + + + VP + L ++ A++ +IP + Sbjct: 219 LAGVGGYVLGNVLISVITAVCTFAWLLIFDVPYPLILALLVALLDLIPIVGSTIAGVIVA 278 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + ++ A + + D L P ++G + +P L T ++ G +G++G Sbjct: 279 LVSLTVSVPTALATVAFFIALRLLEDYLLVPKIIGKTVAVPALVTVVAVLLGGALLGIVG 338 >gi|160935120|ref|ZP_02082503.1| hypothetical protein CLOBOL_00015 [Clostridium bolteae ATCC BAA-613] gi|158441851|gb|EDP19548.1| hypothetical protein CLOBOL_00015 [Clostridium bolteae ATCC BAA-613] Length = 365 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 118/346 (34%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 + I+ ++ II V Y L P ++A+ I P S + Sbjct: 12 DIQKRRTFIISFIYFGIIGVLCYIGLKKLLPILIPFMAAMAIAAMLEPAVSLLDRHMKGG 71 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPGG 116 A + + + + + ++E K+ + + + + S + Sbjct: 72 KGAAAAVVLLVFYGSILTIMCVSGSQILSSIQEQAKKLPGIYSQTIEPGLSHFFSLLENS 131 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + L + + + ++G + + + L + +IA FF Sbjct: 132 FPGHSIHISALGQSLERFMENASVGISSG---LLGWGASAISGIPALVLDFVIAVIASFF 188 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + L ++ + KV ++ + L + + Sbjct: 189 LTGNYRETLDFLLYQIPDDRRQMLLQVLLHIRKVACRLLRAYALLMLLTFTELYIGFLVL 248 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+P+ L IT+++ ++P G ++ G+ A L + + +V +T Sbjct: 249 GIPAGFTLACITSLVDILPVLGTGTVLLPWALIAWTTGSGSLAMGLVCLY-LLIAVVRQT 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P ++G + L + T + G + +GL G+F+ P+ ++A + Sbjct: 308 LEPKIIGHQMGLSPIATLLCIFAGGKLLGLTGIFLFPIAATVLAEL 353 >gi|330991351|ref|ZP_08315302.1| UPF0118 inner membrane protein yhhT [Gluconacetobacter sp. SXCC-1] gi|329761370|gb|EGG77863.1| UPF0118 inner membrane protein yhhT [Gluconacetobacter sp. SXCC-1] Length = 414 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 120/352 (34%), Gaps = 11/352 (3%) Query: 1 MRETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR + ++ + ++ + + +LYF P++ AL++ + Sbjct: 23 MRHSRIDTRTACLLLLSVLAVFYTLYFASAIILPMILALVVNLLLSTPLRFLHMRLRLPK 82 Query: 60 TFLAVIATVSVMCLFI-------VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 A+ + V + VP + L ++ + Sbjct: 83 PLAALCLILCVFGIVGAVGTAISVPATGWLERAPDALNTLRERLAFLRGPFQLLTSASER 142 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 I M + H + + + G++ + RF+S + + MI+ Sbjct: 143 IHNFMTIAGGHVDHTPAETADGHIIVITSPSGGVEGLDRFSSSILLGTQAFMGQFFTMIL 202 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LFF G S+ ++ + +I+ + + + +TII GLV + Sbjct: 203 MLFFLLAQGDSLLRRFVEIMPTFADKRRAVQIAYQIERNVSQYLATITIINSLVGLVNMT 262 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIEL 289 WL G+P+ + GV+ ++ IP P+ + L + + + A Sbjct: 263 QCWLLGMPNPLLWGVVAFLLNYIPIIGPMMGIIIYFLVGLFVYPSAWQALLPPAIYLCIH 322 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P ++ L + L+ G+ G F+ L+A+ +I Sbjct: 323 LTEGETITPMVLARRFTLNPVLVMASLMFWDWLWGIFGAFLSVPLLAVFKII 374 >gi|182415703|ref|YP_001820769.1| hypothetical protein Oter_3895 [Opitutus terrae PB90-1] gi|177842917|gb|ACB77169.1| protein of unknown function UPF0118 [Opitutus terrae PB90-1] Length = 340 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 106/332 (31%), Gaps = 20/332 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L+ + +++ + K + + ++ V++M + + Sbjct: 20 LVALAAVLWLIADAIVVAFGGIVLASVLLSLSGPLSRKTHLGARWS-LLIVVALMLVAVA 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L +LF N+ +P + E W L + +++ Sbjct: 79 ALSWLF----------------GNEIVTQFGELQRQLPEALHKVEQW---LGQSPAGRMV 119 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + G A F +++ ++ +F D L Sbjct: 120 VDSVRQVGGNTEALSQAGAFVGSVFGAAANLLLVLFLGVYFAADPQLYRDGALRLVPPRR 179 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ +R + I + G++ G A L GVP ++LGV+ ++ +P Sbjct: 180 RPQLRRALDDAGVALRKWLVAQAIAMLAVGVLTGVALGLIGVPLALSLGVLAGLLEFVPV 239 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 PI + L L I + P + +KLP + + Sbjct: 240 IGPIVAAVPGLLLAFSHGPNTVLYAALVYVAVQQIESNVITPLVQRWAVKLPPVLGLLAI 299 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 V +G+ G+ L ++ V+ K+ + Sbjct: 300 VAFGLLLGVPGVIFAMPLAVVVMVLVKDLYVE 331 >gi|116492928|ref|YP_804663.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116103078|gb|ABJ68221.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 350 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 119/349 (34%), Gaps = 17/349 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + W + +++ ++ L+ F + +L +I F S + S +I Sbjct: 10 KKSVQLWATLVALILIIFLLRDFMSQILLVVIFSFVSHVGIQKIRKYTKVSQPIGTIIFY 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ F ++K + S + A ++ I + Sbjct: 70 IVLLAFAGFVFSFTASMIYDQLKGIPSLIKHAIDSDTFSNHYVQTILTEI---------- 119 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S + ++ +G++ + R + + LS++F + Y Sbjct: 120 -NRNSQAVKGSQYIAMSGLNQLGRIGIAAEHVIIALFLSMVFNLT-----YNHLREFGHA 173 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + R ++ + +I I ++ W+ GVP + + +I Sbjct: 174 ILKSKYDIMFGNVYYLLRKYVVILGTVIETQLVICIINTGLMVIGLWIIGVPKLLLMAII 233 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ ++P G IS +SI I + + + F L P L+ G Sbjct: 234 VFVLGLVPVAGVLISLIPLSIVAFSANGIISIAEVLCLVILIHFFESYFLHPRLMAGATD 293 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP TF L+ G + +G GL +G +A + + K Sbjct: 294 LPVFVTFITLIIGAKMLGTWGLIVGIPTVAFFIDLLGIQLKQHHPRNPK 342 >gi|18309702|ref|NP_561636.1| hypothetical protein CPE0720 [Clostridium perfringens str. 13] gi|168209902|ref|ZP_02635527.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|18144379|dbj|BAB80426.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|170712033|gb|EDT24215.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] Length = 391 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 99/323 (30%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA------VIATVSVMCLFIVPLL 79 +K + A ++ E S + TV+++ L Sbjct: 41 LVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVTIIVLVGAISA 100 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +V + +++ + + + + T Sbjct: 101 IILFVVPQLTSSVVKLTESIPTYLKSFEVNMNNYADSTVLLSKVWDQVMNTWQEILKTVT 160 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +D+CL+ + I L + I + + + Sbjct: 161 HLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKKVMYAYLRGDIADK 220 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + +V +G A+ G + + +P + V+ ++IP Sbjct: 221 ILEVGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISVLVGTTSLIPILGA 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T S +L+ N A ++ + + P +VGG + L L ++ G Sbjct: 281 FIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVGLSSLWVMLAIMIG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +G+ +G A+I ++ Sbjct: 341 GSAFGFIGMLVGVPTAAVIYCVF 363 >gi|153939240|ref|YP_001392990.1| sporulation integral membrane protein YtvI [Clostridium botulinum F str. Langeland] gi|152935136|gb|ABS40634.1| sporulation integral membrane protein YtvI [Clostridium botulinum F str. Langeland] gi|295320965|gb|ADG01343.1| sporulation integral membrane protein YtvI [Clostridium botulinum F str. 230613] Length = 351 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 114/333 (34%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ ++ FL + P + A + + I K + ++ + I T+ Sbjct: 11 LILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEEE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY----------CLSIIFMIIALFFFYR 179 P S+ E + + G I + + I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ + + + + I K++ L + +++ + Sbjct: 183 DITKHNNKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N L + + + + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLI-SYAAVSTIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|120599132|ref|YP_963706.1| hypothetical protein Sputw3181_2328 [Shewanella sp. W3-18-1] gi|120559225|gb|ABM25152.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] Length = 361 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 79/224 (35%), Gaps = 6/224 (2%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII---ALFFFYRDGFS 183 +P+ L ++ K + A + + +++ I+ +FFF +D Sbjct: 124 FINPEQLNVMVAELKKMLDTQHVLDIAKQIIGYSASLLVLMVYAILVPLLVFFFLKDKDQ 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +++ + + I + G I + G+ + G+ Sbjct: 184 LIRGSKRFFP-ANRQLARQVWFEMNQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYSAL 242 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLV 301 LGV+T + +IP GA + +++ + + + G + +D L P L Sbjct: 243 LGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFTSEFGYLMLGYGIIQALDGNLLVPILF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G+ G+F L +L+ + Sbjct: 303 SDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAW 346 >gi|291515855|emb|CBK65065.1| FAD synthase [Alistipes shahii WAL 8301] Length = 490 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 120/351 (34%), Gaps = 14/351 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIVP 77 L +++ +L + ++ P+ K + +LA +AT+ V+ + + Sbjct: 22 LFLVWYFSSIVVYILVSAVLAVMGNPLVKFLSGLHFKGWQVPRWLAALATLVVIWVVLAT 81 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L LF + + V A G L S L Sbjct: 82 LCSLFVPLVFNKINQFAHVDFAAVVGSIGEPIARMQHDLQALFSLPESTFSLSDELTAAL 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ I L ++I + FFF ++ + S+ + Sbjct: 142 RQIIDINSLNTIFSSVINL---VLSSVIAIFSVSFITFFFLKEEGLFYAMVTSVFPEHYH 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH--VALGVITAIMAMIP 255 + V ++ F G+ ++ + + G+ + +G+I +M ++P Sbjct: 199 GNITRALDSVTVLLARYFTGILSESLLLTIAVTLVMMAFGMKAADAGFIGLIMGVMNVVP 258 Query: 256 GGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPF 309 P+ VS+++ I +G T + G++ + + D L+P L +K Sbjct: 259 YAGPLIGGVVSVFVGIVSPIEGMSVGHTAFVIAGSLLILKGMDDFILQPTLYSERVKAHP 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L F ++ G+LG+ + ++ V KE + ++ N Sbjct: 319 LEIFLVILIAGSLAGILGMLLAIPSYTVLRVFAKEFFSQFRLVRKLNRKNL 369 >gi|167755466|ref|ZP_02427593.1| hypothetical protein CLORAM_00980 [Clostridium ramosum DSM 1402] gi|167704405|gb|EDS18984.1| hypothetical protein CLORAM_00980 [Clostridium ramosum DSM 1402] Length = 378 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 112/324 (34%), Gaps = 13/324 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVPLLFLFYY 84 P L ++I F + ++ ++F VI+ + + + I + + Sbjct: 42 IMPFLLGIMIAFILNVLMIRIEKILSRFILDKKYTSFKRVISIIVSLLIVIGVIGIIITL 101 Query: 85 GMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E+ + +V + + W++ E W + S+ K Sbjct: 102 IIPELTNAIKVIVKSFPETFEQLQVWINQNGNSFPQLETWI-NSVDLNSIASELSGLFKI 160 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +F L+++ I+ + ++ +Q L + P Sbjct: 161 GLTGMLGSTVDVI-SMFFTSILNLVVGIVFALYILMSKETLKRQSHKLIDAYIPKRISVK 219 Query: 204 SRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 V + R+TF +G T+ A G + + +P +G + I A +P Sbjct: 220 LLEVGTLARTTFSNFVIGQTVEAFILGTLCAVGMAVLNLPYAPMVGSLVGITAFVPIVGA 279 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++++ + A ++ + + + P +VG + LP + F + G Sbjct: 280 FIGGGIGAFMILTVDPMQALIFIIFLVVLQQLEGDLIYPRVVGSSVGLPSIWVLFAVTVG 339 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 G+ G+ +++++ + K Sbjct: 340 GGLWGITGMLFSVPVLSVVYALIK 363 >gi|168181101|ref|ZP_02615765.1| sporulation integral membrane protein YtvI [Clostridium botulinum NCTC 2916] gi|226951086|ref|YP_002806177.1| sporulation integral membrane protein YtvI [Clostridium botulinum A2 str. Kyoto] gi|182668156|gb|EDT80135.1| sporulation integral membrane protein YtvI [Clostridium botulinum NCTC 2916] gi|226841539|gb|ACO84205.1| sporulation integral membrane protein YtvI [Clostridium botulinum A2 str. Kyoto] Length = 351 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 114/333 (34%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ ++ FL + P + A + + I K + ++ + I T+ Sbjct: 11 LILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVTLV 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEEE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY----------CLSIIFMIIALFFFYR 179 P S+ E + + G I + + I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ + + + + I K++ L + +++ + Sbjct: 183 DITKHNNKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N L + + + + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLI-SYAAVSTIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|302392163|ref|YP_003827983.1| hypothetical protein Acear_1408 [Acetohalobium arabaticum DSM 5501] gi|302204240|gb|ADL12918.1| protein of unknown function UPF0118 [Acetohalobium arabaticum DSM 5501] Length = 355 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 127/317 (40%), Gaps = 9/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + PVL + PI F ++ + + + + ++ +V + F Sbjct: 36 VISIILLPVLLGGFFYYLLRPIVRFFTARVNSKNLAILITGLLIIIAAVVV-IYFGGSII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+++L++ L + + I G + + + L K + Sbjct: 95 YTELEKLINYFSLNYEVIRENISRI--IKLGNGHLDFLSDFNIQKRLLGFAQRMLEKFSN 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +F+ F+S + ++ + +F+F +D I L S K++ R Sbjct: 153 YNFMGAFSS-----LTNLGTIVVLIPFVVFYFLKDDHKIYYLLLSWFTEENKPQAKRMLR 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + + I+A G + Y L G+P+ +AL +I AI +++P P Sbjct: 208 EIDEALATYIGTQLIVAFILGSFMFVGYLLIGLPNSLALALIIAITSLVPILGPALGILP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + N LF+ A+ ++ +RP + GG + + L F ++ + G+ Sbjct: 268 ALFVALTTNFLMIVKLFIVLAVAQYLEGNLVRPIVQGGKLNIHPLVVLFLIIISILLFGV 327 Query: 326 LG-LFIGPVLMALIAVI 341 LG LF+ P+ + + +I Sbjct: 328 LGALFVVPIYVVVRIII 344 >gi|257866043|ref|ZP_05645696.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257872374|ref|ZP_05652027.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257875678|ref|ZP_05655331.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257799977|gb|EEV29029.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257806538|gb|EEV35360.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257809844|gb|EEV38664.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 347 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 110/340 (32%), Gaps = 24/340 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + RW ++F++ L+ + +L I + + + K +++ Sbjct: 8 LQNLVLRRWTVLFMLAGILFLFRSLMTILLLTFIFTYLIYRLVLLLHRKSHLPIKLTSIL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + + +LV+ V Q + + + SE K Sbjct: 68 TYSLIVFILYLVATNYVPIIIKQSVQLVNSVADFYQRTDSNNELIEYVLNLLQTSEYIQK 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +G+ + + FG + L +S + FFF D Sbjct: 128 L----------------QSGVLVVINYLYNFGELALTVLISFLLS----FFFMIDNKKTV 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ + + K R+ +IA+ + A + G P + Sbjct: 168 AFSRLFLQGRGAWFFEDVYYLGAKFTRAFGNVIETQLVIALVNTAITVFALAVMGFPQLL 227 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ +++IP I ++ G + + L + L P L+ Sbjct: 228 SLALMIFFLSLIPVAGVIISCIPLTFIAYSIGGFNDVIYILLIIVFVHALESYILNPRLM 287 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++P TF L GL GL IG L + Sbjct: 288 ANKTEIPMFYTFILLYLSEHLFGLWGLIIGIPLFTFFLDL 327 >gi|221197812|ref|ZP_03570858.1| integral membrane transport protein [Burkholderia multivorans CGD2M] gi|221204630|ref|ZP_03577647.1| integral membrane transport protein [Burkholderia multivorans CGD2] gi|221175487|gb|EEE07917.1| integral membrane transport protein [Burkholderia multivorans CGD2] gi|221181744|gb|EEE14145.1| integral membrane transport protein [Burkholderia multivorans CGD2M] Length = 721 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 5/193 (2%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + A F + +I +I+ F + ++L L + Sbjct: 258 QLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHRTTTAMSDAARR 317 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + FL + + G VL + G+P + GVI +M +P G I+ +I L Sbjct: 318 LSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATI-L 376 Query: 270 LIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + + + + L P + G L + + G +G Sbjct: 377 AAAMSPGWSMIVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGPVG 436 Query: 328 LFIG-PVLMALIA 339 L + P+ + L+ Sbjct: 437 LVLSTPLTLCLVI 449 >gi|227530005|ref|ZP_03960054.1| permease [Lactobacillus vaginalis ATCC 49540] gi|227350084|gb|EEJ40375.1| permease [Lactobacillus vaginalis ATCC 49540] Length = 367 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 108/300 (36%), Gaps = 25/300 (8%) Query: 32 APVLSALIIGFTSW-------PIYSSFISKKEE---SSTFLAVIATVSVMCLFIVPLLFL 81 P+L +I + +YS K F V++ ++++ + ++ + Sbjct: 41 MPLLIGGVIAYIVNLLLNQYEHLYSRIFKTKWAQKYRRLFGIVLSYLTIILILVIVSSLV 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + +K LV+ HG V R++ I + LW + + Sbjct: 101 IPELISCIKLLVAN------HGQVVNRFVKVIEHNKDLNTLWNSFDLEKIKWNQVGKYLT 154 Query: 142 KTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 G F I AS +++ F I L + ++S+Q+ L P Sbjct: 155 AGFGGTFKAIISTASSVFSTVATAVVALFFSIYLLIYK----ETLSRQIKRLINAYLPQL 210 Query: 200 WKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 K I +++ S +G A G+ + +P +GV+TAI A+IP Sbjct: 211 GKHIFYVTKVFNDSYSSYIVGQCKDAAILGIFCFIGMSVLRMPYASMIGVVTAIGALIPI 270 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I V + ++ + A ++ I + ++ P +VG I LP + F + Sbjct: 271 IGAILGAGVGVIIIFAVSPIQAGMFLIFIIILQQLDNRITYPLVVGKSIGLPSVWVFAAV 330 >gi|254432531|ref|ZP_05046234.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] gi|197626984|gb|EDY39543.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] Length = 341 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 111/311 (35%), Gaps = 30/311 (9%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++A ++ +P+ + + + + ++ + + + + + L + + Sbjct: 41 LTLFIAAAMLAVLLDFPV--RRLVRLGCARSLAILLTVLGTLGVVGLFVQVLGSQLINQG 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++ +VLA Q L LK + L + Sbjct: 99 STLLNDLVLAFQRPD----------------------LPFHSFLKTIEPPQLIELLRASL 136 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G F S+ ++I ++ +G + Q L L + + R V K Sbjct: 137 GTSLGVVGGAFTSVFGSVFLVVIVVYMLIDNGATWRQLLRLLPIDV----RDRFDRSVQK 192 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 + G + I L + + GV + L ++ ++ IPG GA + + Sbjct: 193 NVLGFLRGQVTLMIFLCLASLLVFAVLGVKFSLLLAIVVGVLDAIPGIGATLGVIVAATV 252 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + A + + + I D + P ++G +++ + FF L G R GLLG+ Sbjct: 253 VFLTQGQWLALQVVIASVVLQQIQDNLIHPRVMGRVLEIQPVVLFFALFVGERLAGLLGV 312 Query: 329 FIGPVLMALIA 339 F+ + ++ Sbjct: 313 FLAIPVAGMLL 323 >gi|170756253|ref|YP_001783269.1| sporulation integral membrane protein YtvI [Clostridium botulinum B1 str. Okra] gi|169121465|gb|ACA45301.1| sporulation integral membrane protein YtvI [Clostridium botulinum B1 str. Okra] Length = 351 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 115/333 (34%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ ++ FL + P + A + + I K + ++ + I T+ Sbjct: 11 LILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEEE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY----------CLSIIFMIIALFFFYR 179 P S+ E + + G I + + I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ + + + + I K++ L + +++ + Sbjct: 183 DITKHNNKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N A L + + + + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVAIGLLI-SYAAVSTIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|297467484|ref|XP_599430.5| PREDICTED: chromosome 9 open reading frame 5-like isoform 2 [Bos taurus] gi|297478245|ref|XP_002689957.1| PREDICTED: chromosome 9 open reading frame 5-like [Bos taurus] gi|296484392|gb|DAA26507.1| chromosome 9 open reading frame 5-like [Bos taurus] Length = 863 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 88/245 (35%), Gaps = 15/245 (6%) Query: 108 RWLSDIPGGMWASELWTKHL------SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 WL DI + +++ + + L + I + G L Sbjct: 592 SWLGDILDWQDIASFVHENIETFLSILESLWVVMSRNVSLLFSTITTLLTILFYSGTALL 651 Query: 162 DYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIRSTFLG 217 ++ LS+I + LF+ + + + SL P I + V + IR F Sbjct: 652 NFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDA 711 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIF 276 +A GL + + G+ + AI+ +P G + + L + + Sbjct: 712 SLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLG 771 Query: 277 -NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A L ++ + + VD + + GG T + GG +GL G IGP+L+ Sbjct: 772 CKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAIIGPILL 828 Query: 336 ALIAV 340 ++ V Sbjct: 829 CILVV 833 >gi|190150093|ref|YP_001968618.1| permease perM-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263427|ref|ZP_07545043.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915224|gb|ACE61476.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871305|gb|EFN03033.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 353 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 118/354 (33%), Gaps = 15/354 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 ++ +PQ + I+ I +YF P+L A++ + WPI K Sbjct: 10 KQKFNDPQAVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPR-- 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + V+ FI FLF + + + V+ + + WL +P Sbjct: 68 ---LLSLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPE 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S LK F ++ + S G+ + + ++ FF + Sbjct: 125 LIDYAMLDSLMNMLKEKILGFGESLLALSVNSIISLVGLGIYAFLVPLMV-----FFLLK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + I + G + + G+V + + + Sbjct: 180 DKPLFVRGFIKFLPK-NRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAIFLFFDLR 238 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V + +IP GA + V++ L G + L L I + + Sbjct: 239 YPLLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVV 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PFL + L L ++ G G+F L L+ + +E Sbjct: 299 PFLFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 352 >gi|189425972|ref|YP_001953149.1| hypothetical protein Glov_2922 [Geobacter lovleyi SZ] gi|189422231|gb|ACD96629.1| protein of unknown function UPF0118 [Geobacter lovleyi SZ] Length = 357 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 100/323 (30%), Gaps = 14/323 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 L + +I + P+ + + + + ++ F L FL + + Sbjct: 42 FLLSFVIAYLLDPLVVRLEKRLKRIHAIALLYVVLGIISTFG--LAFLLPMLTISWDSFL 99 Query: 94 SKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + Q + W S +P + E+ + + ++E + Sbjct: 100 RNLPQQLQQIKQALLGWQSTLPTHYGSEEITWLLDNIIGNADSMAEKA---------GIW 150 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A F ++I I +FF I ++ R + + Sbjct: 151 AYGFATRMFFNVFNLILAPILVFFMLNYKQKIMDTTALWIPETRRDLILQMGREIDSSVG 210 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 G +++I L G+P + G+ +++P G ++ ++ + Sbjct: 211 GYIRGQVMVSIVVALATIPTLMWLGIPHPILCGLFAGAASILPFVGVILAMLPPLLFAWL 270 Query: 272 KGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A+ F+ ++P + + L L T ++ MG G+ + Sbjct: 271 TYGTGTIIVKVLIAFAVIYFLEGYLVKPLVFKESMNLNPLLTIIMVMAFGELMGFWGILL 330 Query: 331 GPVLMALIAVIWKESIMAIKENK 353 + A + + + + N Sbjct: 331 ALPITAAMIIASQHWLKGDFANP 353 >gi|256544459|ref|ZP_05471832.1| membrane protein [Anaerococcus vaginalis ATCC 51170] gi|256399784|gb|EEU13388.1| membrane protein [Anaerococcus vaginalis ATCC 51170] Length = 398 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 120/344 (34%), Gaps = 9/344 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK---KEESSTFLAVIATVSVMCLFIV 76 + V + ++ F + A II SK E++ + V + +S LFI+ Sbjct: 35 LTVFIAVIQPFLIGFMLAFIINLPMNFFERKVYSKIFKTEKTKKLVPVFSLISSWILFIL 94 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGMWASELWTKHLSHPQSL 133 ++ + + + V+ ++ + L + + + ++ Sbjct: 95 GIVIFLNVLIPRISKAVTALIERFPLFLDDLIDLLNKNKLTKNFADDAQKYINSVDWNNV 154 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY--RDGFSISQQLD-S 190 + + + + + S + I ++F +D ++ ++ S Sbjct: 155 LVQVKDYFVGEAGNIFDKTTSIINSVSSTIITIAAATIFSVFVLINKKDLKILANRIIYS 214 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + K++ + S + ++ G+++ + +P ++ AI Sbjct: 215 LFKRSTADEINKVASLSYSSFASYINSKALSSLILGILVFVGMLILKIPFAAMAAILVAI 274 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP P+ T + + L+ + F + ++ I + + P L G I LP + Sbjct: 275 ADFIPYVGPLIATVIMMILIFIESPFKSLVFLIFLLIAQQVQGSIIYPALAGKTIGLPSI 334 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+ + + +++ + E + KE Sbjct: 335 WVIVSIAIGGSLFGIVGMLVSIPIASILYTLMNEKMDKTLAKKE 378 >gi|229553048|ref|ZP_04441773.1| possible permease [Lactobacillus rhamnosus LMS2-1] gi|229313545|gb|EEN79518.1| possible permease [Lactobacillus rhamnosus LMS2-1] Length = 363 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 123/344 (35%), Gaps = 23/344 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + Sbjct: 10 EKFINNVPVRRTVVLFSVFLVLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHVRP--- 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V V+ ++I+ +L L Y + + ++ + + V + + Sbjct: 67 ----FVIVVPVYILVILGLIYAAVHYVPAIIHQTITLFNS---VQDFYNSDAFANNQVMQ 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + +L +T G+ + +A G + L LS I FFF + Sbjct: 120 WVLQSTKSLNLTEQLKT-----GLSTVLEYAGNIGAMGLTLVLSFILS----FFFTIELD 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ + F Y+K + K I + IA+ ++ +P Sbjct: 171 SLPAFGQLFLDSPFGWYFKDLRYFALKFINTFGVVMEAQIFIAVVNTVITTITLLFMKMP 230 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +L ++ ++++IP GA IS ++I G + + + A + L P Sbjct: 231 NIPSLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVITILIMIAAIHVLEAYVLNP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ R G GL +G + + Sbjct: 291 KFMSSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 334 >gi|73971940|ref|XP_855287.1| PREDICTED: similar to CG2698-PA [Canis familiaris] Length = 950 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 720 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 779 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 780 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 839 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 840 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 896 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 897 GPILLCILVV 906 >gi|46907181|ref|YP_013570.1| hypothetical protein LMOf2365_0969 [Listeria monocytogenes str. 4b F2365] gi|226223567|ref|YP_002757674.1| hypothetical protein Lm4b_00969 [Listeria monocytogenes Clip81459] gi|254823780|ref|ZP_05228781.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254993695|ref|ZP_05275885.1| hypothetical protein LmonocytoFSL_12398 [Listeria monocytogenes FSL J2-064] gi|255520753|ref|ZP_05387990.1| hypothetical protein LmonocFSL_05921 [Listeria monocytogenes FSL J1-175] gi|46880448|gb|AAT03747.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876029|emb|CAS04735.1| Conserved hypothetical membrane protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593001|gb|EFG00762.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 348 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 114/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|77164902|ref|YP_343427.1| hypothetical protein Noc_1408 [Nitrosococcus oceani ATCC 19707] gi|254434366|ref|ZP_05047874.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76883216|gb|ABA57897.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207090699|gb|EDZ67970.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 372 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 116/341 (34%), Gaps = 12/341 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +PQ +++ + ++ F+ APVL++L+I + I + ++A Sbjct: 14 DPQVTGLAILLAVGFATVVFMGHVLAPVLASLVIAYLLEGIVGYLERR--GCPRWIA--- 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V+ +F+V ++ LF + L +V Q + + + Sbjct: 69 ---VILVFVVFMVALFGDIFGLIPLLSQQVTQFFQLLPKMIAQGQQLLLSLPEYYPNLFS 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +L + G + + + + + + ++ + + +FFF +D + Sbjct: 126 QDQVNNLVSALHVEVAQLGQEMLSWSLASVTSLIM-LGMYLVLVPLLVFFFLKDKNRLVG 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S ++ R V I + G I + V ++L G+ + L V Sbjct: 185 WCKSYLPQ-ERKLIVQVWREVDFQIANYIRGKCIEILIVWAVSFITFYLLGLQFSMLLSV 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGP 304 + + +IP GA V+ + + F I F+ L P L Sbjct: 244 LMGLSVIIPYIGAMAITLLVAFVAYFQWGLSAELAEAFGVCVIIQFLDGNVLAPLLFAEV 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + +V G GLF L LI + K Sbjct: 304 VDLHPVAVIVAIVVFGGVWGFWGLFFAIPLATLIQAVLKAW 344 >gi|307565980|ref|ZP_07628438.1| membrane family protein [Prevotella amnii CRIS 21A-A] gi|307345168|gb|EFN90547.1| membrane family protein [Prevotella amnii CRIS 21A-A] Length = 360 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 127/359 (35%), Gaps = 17/359 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE-ES 58 ++ +RW ++ +IL +++F L P A ++ + +P+ K S Sbjct: 3 HTISLDKFLRWTVITLILAAVFFTLKALSEVLLPFFIAWLLAYLLYPVVKFIQYKMHVTS 62 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + ++ + + + + EM++L Q + + Sbjct: 63 RAISIILTFILIIAIIAGIVFIIVPPFISEMEKLEVLANKYIQSNTHSNNIAAMLKQWFT 122 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 H + +T + + + + S I ++ +FF Sbjct: 123 THRFEINHFLKSRDFTDAIKTAMPQ-----VFALLGQTANVVFSVIASFITLLY-MFFIL 176 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D S+ + + + ++ + ++ V K + S G ++A+ ++ + + Sbjct: 177 LDYESLGENFFKMIPRKWRSFSRVLASDVEKALNSYIRGQGMVALCMAIMFCIGFSIIDF 236 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATC--LFLWGAIELFIV 292 P + LG++ I+ ++P ++ +I L+ G+ F L I I Sbjct: 237 PMAIGLGILIGILDLVPYLHALALIPTAILALMKAADTGHNFWMIFGGALLVFIIVQIIT 296 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D + P ++G + L L +G +GL I L +I WK + +E Sbjct: 297 DMIITPKIMGKAMGLNPAMLLLSLSIWGALLGFIGLIIALPLTTIIIAYWKRYVTKDEE 355 >gi|168700115|ref|ZP_02732392.1| hypothetical protein GobsU_11345 [Gemmata obscuriglobus UQM 2246] Length = 421 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 120/331 (36%), Gaps = 8/331 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVMCL 73 +F I V+LY F PV+ ++++ +P + + L++ A V++ + Sbjct: 18 VFGISVALYLGSSIFIPVVFSILLASILYPFAQFTHERLLVPWFFACLLSIFALVALHLV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + + + + + + L P HP+ Sbjct: 78 VIGAFAWAIPQTLKGLPQSEEQWIGQYNKVQSNLGTL--FPIHDDDEVFGRADQQHPERH 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K D + +R + LD+ I ++ F +G ++ ++ ++ Sbjct: 136 PKAVALLRKQLSEDSMSSVLARLSLAGLDHLWQAILVLFITLFLIFEGQMLADKVKAIFG 195 Query: 194 HLFPAYWKKISR--IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + IR+ + T++ +G LVLG+ Y G+ ++ A++ Sbjct: 196 TSMETRGRVTLAFAEMGEAIRTYLVWRTVVNLGLALVLGTVYQQVGLQHWYLWALLVAVL 255 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +P G + + L+ + A + ++ + + P+++G + L Sbjct: 256 SYVPYIGTIAAGIPPFLDALLFVDPLAAFGIAIFYTCVVTFEGYIIVPWVMGRSMDLNAT 315 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + G+ GLF+ LMA + + Sbjct: 316 TVLLACLYWHQVWGIAGLFLAMPLMAALKAV 346 >gi|147920906|ref|YP_685287.1| hypothetical protein RCIX547 [uncultured methanogenic archaeon RC-I] gi|110620683|emb|CAJ35961.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 385 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 126/358 (35%), Gaps = 29/358 (8%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ L+ F + + + + + PI S+ ++ L ++ + + I+ + + Sbjct: 25 VWILRPFLDVFVYGIFVYYITRPIKQWL-SRYIKNEGILVSVSLLMLALPLIILIAYTLL 83 Query: 84 YGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 GM ++ +V+ L + + S + + + + ++ Sbjct: 84 VGMSQLMAVVNSYGLTAALPSGPLTNMTTSFSQLHSNLTSGNFTLESVTDITRQDWYKTI 143 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + A G +D + + + F+ ++ + + L + Sbjct: 144 SGYSGNLPLLQAIAFSTGSTIVDIAFKLFIIFLVGFYMLKEDAHMQRWFAGTFPKLMDEH 203 Query: 200 WKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAG---------VPSHVALGVI 247 + + R V ++ F G + + ++ + +PS + LG++ Sbjct: 204 NRLLPRYASAVDADLQKLFFGNLLSIVFFAIIAAVVFEGLSIFAPVPSLQIPSPILLGIL 263 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC---------LFLWGAIELFIVDKTLR 297 + A+IP G + + +YLLI I + L I ++ Sbjct: 264 CGVSALIPIVGMWLVAGPLFLYLLISSLIAGTLFTHFGYFLFMVLAIFVFVLTIPSFVIQ 323 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 PF+ G ++ F V G G+ GLF+G +++ L+ + + + ++ Sbjct: 324 PFMARG--QVHSGLLMFAYVLGPLVFGISGLFLGAIVLVLVTHYFGIVVPEMAAEGQE 379 >gi|293570925|ref|ZP_06681970.1| transport protein [Enterococcus faecium E980] gi|291608988|gb|EFF38265.1| transport protein [Enterococcus faecium E980] Length = 345 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLSVIFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGIL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDAD-----PVLQYIHNY 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 120 IERNDFFEQL----------QNGASIALGYLQDIGKLAVAFAMSFILS----FFFMIEKQ 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ + K + + IIA+ L+ A G Sbjct: 166 KTILFSRLFLKSEFSWFFQDLYYFADKFVNTFGLVLEAQFIIALLNTLLTTIALAAFGFH 225 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + + I L P Sbjct: 226 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTILVVHLIESYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ LP TF L+ R G+ GL +G + + K + +E Sbjct: 286 KLMSSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHSPRE 341 >gi|260459332|ref|ZP_05807587.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259034886|gb|EEW36142.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 663 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 115/340 (33%), Gaps = 28/340 (8%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LYF + F P+ AL++ F P+ S+ K+ AVI++V L F + Sbjct: 44 LYFGREVFLPIAIALLLTFALAPVVSAL--KRIGIPRLAAVISSVLGTFAA---LAFFSF 98 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-----------------MWASELWTKH 126 + ++ EL V L + + R L + G + E Sbjct: 99 IVVTQVGELAQNVSLYQTNILAKVRSLKETGVGGGIIARLTGVIERVGQEINKQEPAQPA 158 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S PQ + E ++ + + L I+ +I F + + Sbjct: 159 ASQPQREPVPVEIVSHERPLEILQNLIAPLVSPLASAGLIIVVVI----FMLLEREDLRD 214 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + + + K + L ++ I + + W+ G+P+ + G+ Sbjct: 215 RFIRLVGYGDLHRTTEALQDAGKRLGRYLLMQLVVNILYAVPISIGLWILGIPNALLWGL 274 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGP 304 + + +P P+ + ++L + + L+ + I + P+L G Sbjct: 275 LALALRFVPYIGPVIGALLPLFLALAVAPGWSLLLWTAALFVIMEVITGNVIEPWLYGSR 334 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L + G LGL + L + V+ + Sbjct: 335 TGLSPLAVIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRH 374 >gi|257884562|ref|ZP_05664215.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257887388|ref|ZP_05667041.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257895880|ref|ZP_05675533.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257898506|ref|ZP_05678159.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257820400|gb|EEV47548.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257823442|gb|EEV50374.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257832445|gb|EEV58866.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257836418|gb|EEV61492.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 350 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 10 QRFLANEKIRRLTVLLSVIFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGIL 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 70 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDAD-----PVLQYIHNY 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 125 IERNDFFEQL----------QNGASIALGYLQDIGKLAVAFAMSFILS----FFFMIEKQ 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ + K + + IIA+ L+ A G Sbjct: 171 KTIFFSRLFLKSEFSWFFQDLYYFADKFVNTFGLVLEAQFIIALLNTLLTTIALAAFGFH 230 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + + I L P Sbjct: 231 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTILVVHLIESYVLNP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ LP TF L+ R G+ GL +G + + K + +E Sbjct: 291 KLMSSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHSPRE 346 >gi|295091707|emb|CBK77814.1| Predicted permease [Clostridium cf. saccharolyticum K10] Length = 417 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 3/231 (1%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF---ASRFGMIFLDYCLSIIFMIIALF 175 E ++L + +F+ + + + A + +S IF + L Sbjct: 139 IVEFINSIEIDWKTLMEETASFITSGAGNLLSSTVTAAVSIASGLTTFSISFIFSLYILL 198 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 Q + + R+ ++ G A+ G + + Sbjct: 199 QKETLSRQFKQLCYAYFPESAVDKGLGVLRMTERIFSKFLTGQCTEAVILGTMFFVTLTI 258 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + +GV+ A A+IP AV I+L++ + A + + I Sbjct: 259 LRLPFALLIGVLIAFTALIPIFGAFIGCAVGIFLMLMVSPVQAIWFTIIFLVLQQIEGNL 318 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P +VG + LP + + G MG++G+ I L ++ + KE + Sbjct: 319 IYPHVVGSSVGLPSIWVLVAVSLGGSMMGIVGMLIFIPLCSVGYTLLKEDV 369 >gi|237733694|ref|ZP_04564175.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383292|gb|EEO33383.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 378 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 114/324 (35%), Gaps = 13/324 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVPLLFLFYY 84 P L ++I F + ++ ++F VI+ + + + I + + Sbjct: 42 IMPFLLGIMIAFILNVLMIRIEKILSRFILDKKYTSFKRVISIIVSLLIVIGVIGIIITL 101 Query: 85 GMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E+ + +V + + W++ E W + LS F Sbjct: 102 IIPELTNAIKVIVKSFPETFEQLQVWINQNGNSFPQLETWINSIDLNSIASELSGLF--K 159 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 G+ + +F L+++ I+ + ++ +Q L + P Sbjct: 160 IGLTGMLGSTVDVISMFFTSILNLVVGIVFALYILMSKETLKRQSHKLIDAYIPKRISVK 219 Query: 204 SRIVPKVIRSTF----LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 V + R+TF +G T+ A G + + +P +G + I A +P Sbjct: 220 LLEVGTLARTTFSNFVIGQTVEAFILGTLCAVGMAVLNLPYAPMVGSLVGITAFVPIVGA 279 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++++ + A ++ + + + P +VG + LP + F + G Sbjct: 280 FIGGGIGAFMILTVDPMQALIFIIFLVVLQQLEGDLIYPRVVGSSVGLPSIWVLFAVTVG 339 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 G+ G+ +++++ + K Sbjct: 340 GGLWGITGMLFSVPVLSVVYALIK 363 >gi|283798148|ref|ZP_06347301.1| putative membrane protein [Clostridium sp. M62/1] gi|291074128|gb|EFE11492.1| putative membrane protein [Clostridium sp. M62/1] Length = 417 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 3/231 (1%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF---ASRFGMIFLDYCLSIIFMIIALF 175 E ++L + +F+ + + + A + +S IF + L Sbjct: 139 IVEFINSIEIDWKTLMEETASFITSGAGNLLSSTVTAAVSIASGLTTFSISFIFSLYILL 198 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 Q + + R+ ++ G A+ G + + Sbjct: 199 QKETLSRQFKQLCYAYFPESAVDKGLGVLRMTERIFSKFLTGQCTEAVILGTMFFVTLTI 258 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + +GV+ A A+IP AV I+L++ + A + + I Sbjct: 259 LRLPFALLIGVLIAFTALIPIFGAFIGCAVGIFLMLMVSPVQAIWFTIIFLVLQQIEGNL 318 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P +VG + LP + + G MG++G+ I L ++ + KE + Sbjct: 319 IYPHVVGSSVGLPSIWVLVAVSLGGSMMGIVGMLIFIPLCSVGYTLLKEDV 369 >gi|110803722|ref|YP_699066.1| permease [Clostridium perfringens SM101] gi|110684223|gb|ABG87593.1| putative membrane protein [Clostridium perfringens SM101] Length = 345 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 117/322 (36%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + V +++D+ M EL + + E + Sbjct: 94 KEGESFDGLING-------VELFINDLIMKMKFMEL---------GIFDVIEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGIMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMVFIVPIAVVIKVLFDDW 339 >gi|238020241|ref|ZP_04600667.1| hypothetical protein GCWU000324_00116 [Kingella oralis ATCC 51147] gi|237868635|gb|EEP69639.1| hypothetical protein GCWU000324_00116 [Kingella oralis ATCC 51147] Length = 395 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 122/335 (36%), Gaps = 12/335 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ ++ +FL G P + A ++ + P+ S + ++ + + L Sbjct: 55 FLLIAFLVAFFHFLGGILTPFIIAAVLAYILNPLVSKLEAH-GIKRGRASMWVMLFALFL 113 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQ 131 LL + + +++ ++ K+ ++ +P + + Sbjct: 114 LTALLLVIVPMLVQQLQSIIQKL-------PQFADYIHRTALPWFNQKFGHYLSLNNETA 166 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + S I + G +I+ + + L++F D L Sbjct: 167 ANWLRSNAQTIQTRIQQALPALMQSGASLATSLSNIVLLPLLLYYFLLDWARWEAGATEL 226 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +I+ + V+ G ++ + G + G+ L G+ S A+G++ I+ Sbjct: 227 VPRRYLDTYTRITGNMNTVLGEFLRGQLMVMLIMGTLYGTGLMLTGLESGFAIGMVAGIL 286 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPF 309 +P + ++ + + +W + F+ + P +VG I L Sbjct: 287 VFVPYLGAFTGLLLATLAALLQFGSWHGLVSVWAVFAVGQFLESFLITPKIVGDKIGLSP 346 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + +G +G+ + L A+ V+ +E Sbjct: 347 FWVIFSLMAFGQLLGFVGMLVALPLAAVCLVLLQE 381 >gi|297561590|ref|YP_003680564.1| hypothetical protein Ndas_2641 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846038|gb|ADH68058.1| protein of unknown function UPF0118 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 408 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 97/315 (30%), Gaps = 13/315 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P + + + + V+ L +V L L + ++ VS++ + + Sbjct: 66 PAVNWLHRHRWPR-GPATGLVMLLVLALTVVFLSLLGSMLVGQILAFVSEIPAMIRAAL- 123 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W++ ++ +S L + I G L Sbjct: 124 --AWVNTTFDTSYSPTTLLNEISSASGLIEQYASG--------IANNVWGAGTTVLALLF 173 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + + + F+ DG + + S+ + I ++A+ Sbjct: 174 NALTIALFTFYLCADGPRFRRVICSVLPPRTQREVLRAWEIAITKTGGYLYSRALLALVC 233 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 +P AL + +++ IP V + + + I+ A + ++ Sbjct: 234 SGAHYVVLVALDIPFAFALALWVGVLSQFIPTVGTYIGGVVPVLVALMEGIWPAVWVLVF 293 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L+P + + + F ++ GV +G G + + A + Sbjct: 294 IVVYQQFENYLLQPRITARTLDMHPAVAFGSVLAGVAILGAPGALLALPMGASMQAFLGT 353 Query: 345 SIMAIKENKEKISSN 359 I + + + S+ Sbjct: 354 YIRRYEVAEHPLLSD 368 >gi|186686308|ref|YP_001869504.1| hypothetical protein Npun_R6282 [Nostoc punctiforme PCC 73102] gi|186468760|gb|ACC84561.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 361 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 114/319 (35%), Gaps = 18/319 (5%) Query: 37 ALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 I+ F +P+ F + + T +I ++ + LF + + L + + +L++K Sbjct: 44 GAILAFLLNYPV--KFFERARITRTQAVIIVLLATLTLFGILGVTLVPLIIDQTIQLLNK 101 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT--NGIDFIPRFA 153 + P WL + E+ K P L+++S N + + A Sbjct: 102 I----------PDWLGASQANLEQFEMLAKQRRLPIDLRVVSSQINANIQNLVQQLASGA 151 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 F L ++ +I+ F+ G + L +L R+ ++ Sbjct: 152 VGFAGTLLSGLFDVVLVIVLAFYMLLYGDRVWYGLINLLPSNIGEPLTASLRLN---FQN 208 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 FL ++ + L L + + VP + ++ I +IP + L++ Sbjct: 209 FFLSQLLLGLFMMLTLTPIFLVMKVPFALLFAILIGISELIPFIGASLGIGLVTILVLLQ 268 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 N + A + + + + D L P L+G I L + F ++ G GLLG + Sbjct: 269 NWWLAVQVAIAAILMQQLKDNLLAPRLLGNFIGLNPIWIFVAILMGFEIAGLLGTLVAVP 328 Query: 334 LMALIAVIWKESIMAIKEN 352 + I + N Sbjct: 329 IAGTIKGTFDAIKSGKPSN 347 >gi|297626025|ref|YP_003687788.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921790|emb|CBL56350.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 424 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 105/332 (31%), Gaps = 24/332 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESS 59 + P+ + ++ M I S++ + APV L + +PIYS +K + Sbjct: 74 QPRWLPRMSVIFIAMIGIAGSIWLFRQLSWLLAPVFLGLNLVIAFYPIYSGLTRRKWPRA 133 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A++ ++++ + I+ + + + + + S V + ++L A Sbjct: 134 -LAAIVMALALLSVVILAVASMAWAVGTLIGAIPSYVPRIQAMYGDLMQFLVQHHISADA 192 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L + + + G + + Sbjct: 193 VSGFYSRIDPNNVL---------SALTGVLGSISGSIGAGT--------VALTTILMLLV 235 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++L + E P I R + M AI GL + VP Sbjct: 236 DSVGWKRRLG-MVEVGHPRAIGAIRDFAHGTRRYWLVSMVFGAIMAGLNA-IELKILNVP 293 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 V+T I IP G + I L+ NA L + +IV +P Sbjct: 294 LMGVWVVLTFITTFIPSVGFFFAMVPPVIVALVVNGWQNALWLMAIYFVTTWIVQGFFQP 353 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + + +F L+ G LG I Sbjct: 354 KFTGNAVGVNITTSFISLLFWAWVFGPLGALI 385 >gi|237653422|ref|YP_002889736.1| hypothetical protein Tmz1t_2759 [Thauera sp. MZ1T] gi|237624669|gb|ACR01359.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 368 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 115/322 (35%), Gaps = 16/322 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P + + + P + ++++ + + ++ L L Sbjct: 30 PILTPFVVGAVFAYICDPAVNWMVARRVPRALAVLLVILAL---------GLLLIALALI 80 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + +V + + +P + ++ + T+ + Sbjct: 81 LVPMVYREGVLLVRRLPELVQMFNLNVAPLLEARLGVDIRLNAEQFQQLIADNWTSAQEL 140 Query: 149 IPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +P + GM L + +++ + + +F+ ++ I +L+ + + K++ Sbjct: 141 VPAVLAHLKTGGMAVLGFLANVVLIPLVMFYLLQEWPRILDELERIVPRPWVDGTKRVLG 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP---GGAPISF 262 + V+ G + + + + WLAG+ + +GV+T ++ IP G + Sbjct: 201 DIDSVMSEFLRGQLSVMLLLAVFYSAGLWLAGLNFWLPVGVLTGLLVFIPYVGFGGGLIL 260 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ L +G + + A+ + L P+LVG I L L F L+ + Sbjct: 261 AIVAALLQAQG-WPPLAGVAIVYALGQVVESFVLTPYLVGERIGLHPLAVIFALMAFGQL 319 Query: 323 MGLLGLFIGPVLMALIAVIWKE 344 G +G+ + + A + V +E Sbjct: 320 FGFVGVLVALPVSAALLVGLRE 341 >gi|182679902|ref|YP_001834048.1| hypothetical protein Bind_2995 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635785|gb|ACB96559.1| protein of unknown function UPF0118 [Beijerinckia indica subsp. indica ATCC 9039] Length = 377 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 97/340 (28%), Gaps = 35/340 (10%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + L Y P++ A+++ P A ++V+ Sbjct: 41 LFLIAALSGAYVAAEVVLPLIFAIVLKLLLQPGMRFLERYYIPRH-LAAFFLILAVLGAI 99 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + P W + G+ LSHP L Sbjct: 100 LGIGAAVSG---------------------PSKAWFEHLSEGLPLLRERLLFLSHPFELL 138 Query: 135 I----------LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S + + + MI+ LFF G Sbjct: 139 DTLRNKMDGMGHSGQLSVSLAKSLSESLQETLLRTTRHFASGLFEMILILFFLLVFGDMF 198 Query: 185 SQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++L + +S+ + I + L +TI+ GL W GV + Sbjct: 199 LRRLVEILPRFKDKRQVVDLSQQIESNISAYLLTITIMNAAVGLATAIVMWACGVGDPIL 258 Query: 244 LGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I ++ +P P V LL ++ A + + + + P L+ Sbjct: 259 WGLIAFLLNFLPIMGPFFGVGVFLVAGLLTIPQLWLALLPAGLYLLIHIMEGELITPMLL 318 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + L+ G+LG + L+A+ +I Sbjct: 319 ARRFTLNPVLVIVSLIFWFWMWGVLGAILSVPLLAMTKII 358 >gi|260062550|ref|YP_003195630.1| hypothetical protein RB2501_13204 [Robiginitalea biformata HTCC2501] gi|88784117|gb|EAR15287.1| hypothetical protein RB2501_13204 [Robiginitalea biformata HTCC2501] Length = 366 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 124/351 (35%), Gaps = 14/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ LY ++ A VL A ++ P F + + +T V+ + Sbjct: 12 RAVFILAAIVLVAYFLYLIRSVIAYVLIAAVVALMGRPAVLFFRQRLKFPNTLAVVVVVL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + + + L ++ + + +I AS + Sbjct: 72 LMIGLLAGIIALFIPVITEQGRNL--SLLDMEELQKDLNSLYLEITEYFGASP---ASID 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + L+ I FIP + + + + + ++ FFF +D L Sbjct: 127 ALIEKTDLEKNVLEGLDIGFIPDMLNSIVGLLSNLSVGLFSVLFIAFFFLKDSRLFQNSL 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + ++ F+G+ ++ L G+ V + + Sbjct: 187 IALVPDDKEGRVLQSLEKIKGLLSRYFVGLLGQIFVLFVIYTVVLLLVGIEDAVVIAFLC 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELF-----IVDKTL-RPF 299 A+ +IP PI + I L + G+ F++ L G + L +VD +P Sbjct: 247 ALFNIIPYVGPIIGGVIMIILTMTSNLGSDFSSVILPDVGWVFLGLTIGQLVDNFFSQPV 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++ L F ++ G++G+ + I VI KE + K Sbjct: 307 IFSNSVRSHPLEIFLVIIIAGLLFGVMGMIVAVPGYTAIKVILKEFLAENK 357 >gi|217964951|ref|YP_002350629.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|290893492|ref|ZP_06556476.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217334221|gb|ACK40015.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|290556993|gb|EFD90523.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307570489|emb|CAR83668.1| membrane protein, putative [Listeria monocytogenes L99] gi|313609663|gb|EFR85166.1| membrane protein YdbI [Listeria monocytogenes FSL F2-208] Length = 348 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 115/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAIFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------TGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ ++ A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTVITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|293375781|ref|ZP_06622051.1| putative membrane protein [Turicibacter sanguinis PC909] gi|292645558|gb|EFF63598.1| putative membrane protein [Turicibacter sanguinis PC909] Length = 386 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 122/335 (36%), Gaps = 19/335 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVSVMCLFIVPLLF 80 +P+L A +I + + ++ S+ I+ + + L + Sbjct: 53 ISPILYAFVISYILYRPLMFIERNFKKGFKKISKKGISNGMARTISILLLAILVFFAIYT 112 Query: 81 LFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + E + V+ + + W++++ + A + + + Sbjct: 113 LINSIFPPLIENIDTVMQSLPNFQTIITEWINNLTPYIKAVSITNEQIQEFTLFLTNLLK 172 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG----EHL 195 L TN ++ + ++ + II F+F +D +I +D LG + Sbjct: 173 GLLTNALN----IGTGVVTNLTGLVINTLATIILTFYFLKDKETIFAGIDKLGTVIFKPQ 228 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A K + +V + +G I A G+ + G P + +G+I + +IP Sbjct: 229 IKAKIKHFLHDLHEVFGNFIVGQLIDAAIVGVASSLLLLIIGHPFALLIGLIAGVTNIIP 288 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI A+++ L + ++ F+ I ++P ++G + L + F Sbjct: 289 YVGPIIGAALALILGLFTSVKLGILGFILLIAYQQIDGYFIQPKILGDSVGLAPVWIFIA 348 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G +G LG+ + + AL V ++ Sbjct: 349 ILIGGNYLGALGMILSVPIAALCKVYIDRRFQKLE 383 >gi|302380731|ref|ZP_07269196.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] gi|302311674|gb|EFK93690.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] Length = 395 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 104/297 (35%), Gaps = 22/297 (7%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L +I+ + P+ F +K +F +I V V+ L I+ + + + ++K Sbjct: 75 INTLLIGIILSYIINPLVKYFENK-GIRRSFAILIIYVIVIFLIILLGMIVVPQTIQQIK 133 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF-- 148 +++ I +P +++DI + ++ K ++ + ++T Sbjct: 134 KMI----------ISLPGFMADI--SIKVNDFNRKIFKEYPNVSKIMSNAMQTVNQKLGT 181 Query: 149 -------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + L II + + F+ D + + + Sbjct: 182 IQTSILDMLSQTGNITGSIFTNLLRIILIPVVSFYMLLDKEKCIDFIMGFIPNKNKDKFL 241 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + K G I+AI G++ A L V + +G++T + +IP P Sbjct: 242 SVCNDMDKAYSEFIRGRLIMAIFVGVLTAIALILMRVDFAIIIGILTMVGDIIPYIGPFI 301 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + L + A + + +I + L P L+G I + L L+ Sbjct: 302 AVTPAFILAFLDSPIKAVVVVIVFVSIQWIENNILAPKLLGSKIGINPLLVIVSLII 358 >gi|260891172|ref|ZP_05902435.1| conserved hypothetical protein [Leptotrichia hofstadii F0254] gi|260859199|gb|EEX73699.1| conserved hypothetical protein [Leptotrichia hofstadii F0254] Length = 299 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 16/302 (5%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K + TF ++ +F+ +L + ++ L + ++ + Sbjct: 14 KKIRLNRTFAILLVLSIFFVIFLYIILTIVPIITRQVSSLTNFLLKNQEKLQ-------- 65 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + +S + S+ + +N I + S F ++ IF I+ Sbjct: 66 ----NNFFGFLESNNIDLRSSLMNSKDVIVSNAITVVSSSFSLISSTFSLLFMTPIFTIM 121 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +F + +I + + ++ + + + + I L + ++ G+V Sbjct: 122 LIFSY----DNIENGVKRILRNMNREDIIVLVKHMDETIGKYILVTALDSMIVGIVSFVI 177 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 ++ + + +I +IP P +I + + + I I Sbjct: 178 FYFLKMDYSMLFSIIVGFGNVIPFIGPFIGLIPAILYAFTKSFKLVILIVVLITIVQTIE 237 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P+L G +++ + T ++ G G+ G F+ + +I + W E Sbjct: 238 ANIVKPWLTGKSVEMHPITTLLVVLVGGALFGIGGAFVAIPVYIVIKLTWLFCWKKYMEK 297 Query: 353 KE 354 E Sbjct: 298 NE 299 >gi|220925388|ref|YP_002500690.1| hypothetical protein Mnod_5545 [Methylobacterium nodulans ORS 2060] gi|219949995|gb|ACL60387.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 375 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 108/317 (34%), Gaps = 8/317 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ML + + ++ +++ LY L+ P ++ + + PI A Sbjct: 1 MLQRRATIVLALLAVVVFLLYQLRDVLVPFVAGAALAYVLDPIADRLERLGIGR--LAAT 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++V L +V L + +++ + V + ++D G + Sbjct: 59 FTILAVFVLLLVLALIIAVPLA--ARQIGALVATLPGTVSRIQAIIADHAGPLLERAGGA 116 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L Q+ + ++ + S + ++ + F+ D + Sbjct: 117 GTLQDLQASVGRLVGQAGSWIVNLVGSLWSG-SQAIVGILSLLVVTPVVAFYLLVDWDRM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 LD + ++R + I S G +++ + G WL G+ V + Sbjct: 176 IATLDGWVPPRHRDTVRMLARDIDAAITSFIRGQSLVCLLLGTFYAVGLWLIGLNFGVLI 235 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLV 301 G++ + IP G+ F + +++ L G + F+ L+P LV Sbjct: 236 GMMAGFLTFIPYVGSLTGFLLSAGVAVVQFWPDWTWILATLGVFLVGQFLEGNVLQPKLV 295 Query: 302 GGPIKLPFLPTFFGLVG 318 G ++L + F L+ Sbjct: 296 GDAVRLHPVWLMFALLA 312 >gi|270294583|ref|ZP_06200785.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270276050|gb|EFA21910.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 371 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 112/334 (33%), Gaps = 15/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY-G 85 L G P A +I + +P+ + F + + +++ + + + +L Sbjct: 31 LSGVLLPFFIAWLIAYLIYPLVTFFQYRLRLKNRVISIFCALFSILIVGGTAFYLLVPPM 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 M E + V+ +G SE +++ ++ E + Sbjct: 91 MDEFVRVKDLVIDYFSNGTHDGN------VPKTLSEFLRENIDTQFVTQLFKEENMLNAI 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +PR S F +I L+ F D SI++ L + + + Sbjct: 145 KETVPRLWSLLSESVNLLFSFFTFFLILLYIVFILLDYESIAEGWTHLVPQKYRPFVVSV 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G +A+ G++ + + P + LG+ + ++P I F Sbjct: 205 MNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNLVPYLQIIGFI 264 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F I I D + P ++G L L Sbjct: 265 PTIVLAILKAADTGGNFWIIIASALAVFIIVQAIQDGFIVPRVMGKITGLNPAIILLSLS 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 325 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINREK 358 >gi|90022219|ref|YP_528046.1| succinyl-diaminopimelate desuccinylase [Saccharophagus degradans 2-40] gi|89951819|gb|ABD81834.1| protein of unknown function UPF0118 [Saccharophagus degradans 2-40] Length = 356 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 113/317 (35%), Gaps = 12/317 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 AP+++A+II F I + + S IA + + +V L++L ++ Sbjct: 39 LAPMIAAVIIAFLMQGIVARLKTW-GVSHIVAVSIAFLILAGSLVVMLIYLLPALWQQVL 97 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ + G + L + + + + ++ + + + +P Sbjct: 98 NLFAEAPRMLKDGQSLLLLLPQEYPALITEDQVKQLMGALRTDLAQAGQTAVSFSLAQLP 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 I + + ++ + I +FFF +DG + + S+ P +KI R + + Sbjct: 158 --------IIVAALIYLVLVPILVFFFLKDGQQMLGWVASVLPRERPV-MQKIWREMNQQ 208 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA-VSIY 268 I + G I + G V + L G+ + LG+ ++P GA I +I Sbjct: 209 IANYVRGKVIEIVIVGGVSSLTFSLLGLRYALLLGIAVGFSVLVPYIGAAIVTLPVAAIG 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + I + L P L +K+ + ++ G G+ Sbjct: 269 FFQFGWGTEFLYIMIAYTIIQALDGNVLVPLLFSEAVKMHPVMIILSVLVFGGFWGFWGV 328 Query: 329 FIGPVLMALIAVIWKES 345 F L L I Sbjct: 329 FFAIPLATLCKAILNAW 345 >gi|113969827|ref|YP_733620.1| hypothetical protein Shewmr4_1485 [Shewanella sp. MR-4] gi|114047055|ref|YP_737605.1| hypothetical protein Shewmr7_1550 [Shewanella sp. MR-7] gi|113884511|gb|ABI38563.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] gi|113888497|gb|ABI42548.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 368 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 109/328 (33%), Gaps = 23/328 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + IIL + P + + I P + +LAVI + + L Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRV--PKWLAVILLMGFIVLMG 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + E + + + W H +++I Sbjct: 77 LWLASLVGSSINEFSKQLPQYRDQLVEQFS-----------------WVLHKLQALNIQI 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 E L + + ++ +I+ + F + S+ ++L L Sbjct: 120 SKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKL-HLALDD 178 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++I R + V + + ++++ GL++G + GV + VI + IP Sbjct: 179 PDMRLQQIDRFLQSVNQYMVIKT-LVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIP 237 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A + ++ + P +G + L L F Sbjct: 238 NIGSIIAAIPAVLLAFIQLGPAAAGGTAMLYVGANMVMGNVVEPKFMGRGLGLSTLVVFL 297 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ M + + Sbjct: 298 SLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|307245623|ref|ZP_07527709.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254581|ref|ZP_07536414.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259035|ref|ZP_07540765.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853325|gb|EFM85544.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862469|gb|EFM94430.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866702|gb|EFM98560.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 350 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 118/354 (33%), Gaps = 15/354 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 ++ +PQ + I+ I +YF P+L A++ + WPI K Sbjct: 7 KQKFNDPQAVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPR-- 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + V+ FI FLF + + + V+ + + WL +P Sbjct: 65 ---LLSLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPE 121 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S LK F ++ + S G+ + + ++ FF + Sbjct: 122 LIDYAMLDSLMNMLKEKILGFGESLLALSVNSIISLVGLGIYAFLVPLMV-----FFLLK 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + I + G + + G+V + + + Sbjct: 177 DKPLFVRGFIKFLPK-NRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAIFLFFDLR 235 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V + +IP GA + V++ L G + L L I + + Sbjct: 236 YPLLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVV 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PFL + L L ++ G G+F L L+ + +E Sbjct: 296 PFLFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 349 >gi|257466379|ref|ZP_05630690.1| permease [Fusobacterium gonidiaformans ATCC 25563] gi|315917535|ref|ZP_07913775.1| permease [Fusobacterium gonidiaformans ATCC 25563] gi|313691410|gb|EFS28245.1| permease [Fusobacterium gonidiaformans ATCC 25563] Length = 373 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 121/338 (35%), Gaps = 15/338 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P++ A+ + +P+ K ++ + + + +L + + Sbjct: 39 FFIPLIWAMFLSILLYPLQKFLEEKLHLKRELALIVVLILLGLCVSLFMLTVIPQVSKSI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 KEL Q + + + + + + L ++ + + + + I I Sbjct: 99 KEL-------QQIYPYMEKRVGEFLDKILSLLHKQGLLLMNETEIMKAISEYTQDNIQKI 151 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQLDSLG----EHLFPAYWKK 202 + D + I LF F + ++ + + + Sbjct: 152 QQIGISIFWNVFDVTFGLANFFIGLFLACFILLKPEDFVKVIERVIYLNVKKEKALNIIE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I R + + +G +++I L++ +L P V ++ + MIP + Sbjct: 212 ILRKSKDIFLNYVVGRLLVSIIVALIVFLILFLTKTPYPVLTALLFGVGNMIPYLGVLVA 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + VS +L++ + L + + + P +VG + L ++ + Sbjct: 272 SLVSGFLILIFAPYKIGYLIFAIVLSQALDGFIIGPKIVGDKVGLNSFWVVVAILLCGKL 331 Query: 323 MGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSN 359 MG+ G+F+G + +I +I++E +++ KE I N Sbjct: 332 MGIAGMFLGVPIFCIIKLIYQEKWRAYVEKEKEGIEEN 369 >gi|307151406|ref|YP_003886790.1| hypothetical protein Cyan7822_1521 [Cyanothece sp. PCC 7822] gi|306981634|gb|ADN13515.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 385 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 108/302 (35%), Gaps = 13/302 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFL--AVIATVSVMCLFIVPLLFLFYYGMLE 88 F +L A ++ F + +K + T+ + V L+ L Y + Sbjct: 55 FVIILLASVVAFLLSYPVNWLENKGINRPQAAIGVFLVTLLIFLAVAVTLVPLAYNQAQQ 114 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + + + QH L + + L + + L+T G Sbjct: 115 LVARLPEWLDSGQHQ------LMRLNEQVDLWGLPISLDGLIAQINSRLASELQTLGGKT 168 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A + + L ++ II F+ I Q L + + R Sbjct: 169 L-NLAVSLTVFTVVKSLDVLLTIILTFYLLLHTRDIWQSLIEWLPKPIQGPFSQTLR--- 224 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 ++ FLG I A + L S++ + VP + G+ +MA+IP G V++ Sbjct: 225 SSFQNYFLGQIISATCMAVGLVSSFLVLKVPFGLLFGLTIGVMALIPFGGSAGIVTVTL- 283 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ +I A + + +V+ + P ++G L L+ G R GLLG+ Sbjct: 284 LIALRDIKLALQVLACALVVQQVVENGIAPRILGSVTGLNPFWILLALLSGARIGGLLGV 343 Query: 329 FI 330 + Sbjct: 344 IV 345 >gi|187934848|ref|YP_001885260.1| permease [Clostridium botulinum B str. Eklund 17B] gi|187723001|gb|ACD24222.1| putative membrane protein [Clostridium botulinum B str. Eklund 17B] Length = 382 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 118/327 (36%), Gaps = 5/327 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFL 81 + L+ F A I+ F K + V+ ++ M L + + F+ Sbjct: 44 IVILQPFIIGFSIAYILNFILKFYEKKLNKYSKLKAKRGLGLVLTYITAMLLVGLFIQFV 103 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + LV+ V ++++ + + SE + +++ + I + Sbjct: 104 LPQLIQSIIGLVNDVPKFINEST---KFINKLMLDLNISEEYLPLINNNFNEFINYIIKI 160 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 TN + + F ++ + L +I I L + + ++ Sbjct: 161 ATNLLPVLGSFVTKIASSIWNIVLGVIISIYLLIDKEKFCAMSKKVTYAIFFKNAAEKII 220 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I+ +G + + G++ + +P + + VI I +IP P Sbjct: 221 EITHRSNDTFGKFLMGKILDSFIIGILTFVILTIFRIPYAILISVIVGITNIIPFFGPFI 280 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 S+ +++ + A L + I + P ++G I + F ++ + Sbjct: 281 GAIPSVIIILFVSPIKALWFLLIILVIQQIDGNIIGPKILGDSIGISAFWILFSILFAGK 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 +GL+G+ IG L A++ I KE + A Sbjct: 341 FLGLIGMIIGVPLFAVVYSIIKEIVEA 367 >gi|302537310|ref|ZP_07289652.1| conserved hypothetical protein [Streptomyces sp. C] gi|302446205|gb|EFL18021.1| conserved hypothetical protein [Streptomyces sp. C] Length = 426 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 100/325 (30%), Gaps = 14/325 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L G +L A + P + ++ + + V L L Sbjct: 92 LIGLLVNILIAFFLALAIEPAVARMAAR-GMRRGLATFLVFLGVFVAGAGFLAMLGSMLA 150 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ++V I + ++ + + +++ + Sbjct: 151 GQIIDMVEGFPGYLDSVIDSINR-------TFHTDFSRLEIQDSLLRSQWLQKYVQNSAS 203 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + A+ G +F ++ + + F+F DG + + L S+ + I Sbjct: 204 GVLDVSATVLGGLF-----KLLTIFLFSFYFAADGPRLRRALCSVLPPAKQREVLRAWEI 258 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAV 265 ++A+ GL + L V AL V +++ IP A+ Sbjct: 259 AVAKTGGYLYSRGLMALISGLAHYVLFVLLDVAYAPALAVWVGLVSQFIPTIGTYLAGAL 318 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A + + I + L+P L + + F ++ G +G Sbjct: 319 PMLIAFAADPWYALYVLGFVVIYQQFENYVLQPKLTSRTVDIHPAVAFGSVIAGTALLGA 378 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 +G I +A + + + Sbjct: 379 VGALIAIPAVATLQAFLGAYVKRYE 403 >gi|75676096|ref|YP_318517.1| hypothetical protein Nwi_1905 [Nitrobacter winogradskyi Nb-255] gi|74420966|gb|ABA05165.1| Protein of unknown function UPF0118 [Nitrobacter winogradskyi Nb-255] Length = 379 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 89/334 (26%), Gaps = 10/334 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L ++ + + ++ G + + T VI + L ++ Sbjct: 37 LALAWYSSATLLMLFAGVLFGVFLTAMADLLRRVFGGNQTLRLVIVCILFTGLLSGVVVL 96 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWL----------SDIPGGMWASELWTKHLSHP 130 + L S + + + P + P Sbjct: 97 GGATIAQQATALSSTLRAQLGNARDFLEKQGVDTSFLNVGARTPSTDNGVTPIPAPSASP 156 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + +G I + + + +I + Sbjct: 157 SRGPKLPDASTIASGTGAIVSQTIKILARVFEGVGNFFIVIFLGLLLAAQPKVYRDGILR 216 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + V + +R LG L+ L G+P + LG IT + Sbjct: 217 FVPRQRLPEAASLIDDVSETLRRWLLGQMATMASLFLLTWIGLTLIGIPGALVLGFITGL 276 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP I A+ + + + F+ F+ L P + I +P Sbjct: 277 LTFIPNIGAILAGALIVLASLGSGLTAIISAFMLYLAVQFLEGNVLTPLIQRHAISIPPA 336 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F + G+ GL + L+A+I V+ Sbjct: 337 TLFAAQIFLGVLFGVWGLALALPLIAVIKVVLNH 370 >gi|32473117|ref|NP_866111.1| hypothetical protein RB4458 [Rhodopirellula baltica SH 1] gi|32397796|emb|CAD73797.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 342 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 2/261 (0%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + ++ + S A Q + + + S + Sbjct: 70 LVISTIAVVSCLTMYSFANSAAQKAAQFKDRIENSVQETFESVKQQPLVEDHLEEDAKLS 129 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + ++G A F + ++I +F + + Sbjct: 130 SMMPSSGKSI--GLAKNFFASAFGGMADFLILLILSIYFALSPDKYRVGAIRMLPTGWRE 187 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + +G I G+V G + GVP + LGV ++ IP Sbjct: 188 KTSGLLSQSSTTLWRWMIGRLIAMALVGVVFGIGLAVIGVPMPLELGVFAGLVTFIPNIG 247 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I+ ++ L + + + + I + P + ++LP + Sbjct: 248 GIAAVVPALLLASQQGSTALISVLVLYLVIQTIESYLITPMVQEHQVELPPAMVILAQII 307 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 G G G+ + A+ Sbjct: 308 GGLVFGFWGIVFATPMFAVSM 328 >gi|257057886|ref|YP_003135718.1| putative permease [Saccharomonospora viridis DSM 43017] gi|256587758|gb|ACU98891.1| predicted permease [Saccharomonospora viridis DSM 43017] Length = 403 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 100/298 (33%), Gaps = 13/298 (4%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + L F+ + L KV N V WL + P + ++ Sbjct: 76 AAAIVLIGGLGIVGALLTFVITQFTAGLPALQEKV---NSSLDRVNDWLINGPLHLRETQ 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L+ I A + ++ ++ L FF G Sbjct: 133 IVDFVNNAVDFLQENQAA---------IADSALSTAGAVGEILTGLLLTLVVLVFFLAHG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L R + S +A+ +G+ +G W+ GVP Sbjct: 184 QQIWNFLIRGVPAPVRKRVDLAGRRGFASLVSYVRATAAVAVVDGVGIGIGLWIVGVPLA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L + + A IP + AV++ + L+ A + + + L+P L Sbjct: 244 IPLATLVFLGAFIPIIGAVVTGAVAVLVALVTNGFVTALIVLAIVVGVMQLEGNVLQPLL 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G ++L L + G+ T G+ G + L+A++ K E + + Sbjct: 304 LGRAVRLHPLAVILAITAGMTTAGITGALLSVPLLAVLNSGIKSLAQEASEGDAEPEA 361 >gi|160889921|ref|ZP_02070924.1| hypothetical protein BACUNI_02354 [Bacteroides uniformis ATCC 8492] gi|156860309|gb|EDO53740.1| hypothetical protein BACUNI_02354 [Bacteroides uniformis ATCC 8492] Length = 371 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 112/334 (33%), Gaps = 15/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY-G 85 L G P A +I + +P+ + F + + +++ + + + +L Sbjct: 31 LSGVLLPFFIAWLIAYLIYPLVTFFQYRLRLKNRVISIFCALFSILIVGGTAFYLLVPPM 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 M E + V+ +G SE +++ ++ E + Sbjct: 91 MDEFVRVKDLVIDYFSNGTHDGN------VPKTLSEFLRENIDTQFVTQLFKEENMLNAI 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +PR S F +I L+ F D SIS+ L + + + Sbjct: 145 KETVPRLWSLLSESVNLLFSFFTFFLILLYIVFILLDYESISEGWTHLVPQKYRPFVINV 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G +A+ G++ + + P + LG+ + ++P I F Sbjct: 205 MNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNLVPYLQIIGFI 264 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F I I D + P ++G L L Sbjct: 265 PTIVLAILKAADTGGNFWIIIASALAVFIIVQAIQDGFIVPRVMGKITGLNPAIILLSLS 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 325 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINREK 358 >gi|91212964|ref|YP_542950.1| hypothetical protein UTI89_C3990 [Escherichia coli UTI89] gi|237703221|ref|ZP_04533702.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074538|gb|ABE09419.1| hypothetical protein YhhT [Escherichia coli UTI89] gi|226902485|gb|EEH88744.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|315286115|gb|EFU45553.1| conserved hypothetical protein [Escherichia coli MS 110-3] Length = 376 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPRFNKE--------------LTRKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|293377081|ref|ZP_06623291.1| putative membrane protein [Enterococcus faecium PC4.1] gi|292644297|gb|EFF62397.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 345 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLSVIFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGIL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDAD-----PVLQYIHNY 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 120 IERNDFFEQL----------QNGASIALGYLQDIGKLAVAFAMSFILS----FFFMIEKQ 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ + K + + IIA+ L+ A G Sbjct: 166 KTIFFSRLFLKSEFSWFFQDLYYFADKFVNTFGLVLEAQFIIALLNTLLTTIALAAFGFH 225 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + + I L P Sbjct: 226 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTILVVHLIESYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ LP TF L+ R G+ GL +G + + K + +E Sbjct: 286 KLMSSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHSPRE 341 >gi|300690558|ref|YP_003751553.1| permease transmembrane transport protein (perM) [Ralstonia solanacearum PSI07] gi|299077618|emb|CBJ50253.1| putative permease transmembrane transport protein (perM) [Ralstonia solanacearum PSI07] Length = 356 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 109/316 (34%), Gaps = 10/316 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P + A I+ + P + + + + + + + +L + E+ Sbjct: 35 TPFVFAFILSYILHPGVAWLQRHRVPR-VLGVFLMILLLTVVAVALMLLILAVLQREIPA 93 Query: 92 LVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + ++ + ++ V L+++ + + + + + Sbjct: 94 IREQLPGMLSKLNAAVTPRLAEMGVHVRFD------FPGLRKMLTEQLAASPEDVMSTAL 147 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + G + + + I +F+ D + ++L+ + ++++ + Sbjct: 148 NYLRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLMRRLEGAVPRRWIDKTRELAAETDGL 207 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY-- 268 + G I+ + + S LAG + +G+ T + IP ++I Sbjct: 208 LSQYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGIFTGLAVFIPYIGFGIGLTLAILSA 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LL GN++ + + + + L P LVG I L L L+ + G G+ Sbjct: 268 LLQFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGERIGLHPLAVILALLAFGQLFGFFGI 327 Query: 329 FIGPVLMALIAVIWKE 344 + + A++ V ++ Sbjct: 328 LLALPISAVLLVGLRQ 343 >gi|254520402|ref|ZP_05132458.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226914151|gb|EEH99352.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 355 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 129/351 (36%), Gaps = 21/351 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTS--------WPIYSSFISKKEESSTFLAVIAT 67 I+ I+L + L+ F + + +II P+ + F+ KK + + A + Sbjct: 18 ILVILLGKISVLRNFINVIFAVVIIPIIFGVFLFYILKPLNNIFLKKKMKGGS-AASLTL 76 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + Y + + L + + + G ++ + + K L Sbjct: 77 LIFFFIAAGIMKYFGDYFIEQFINLKIIFLKIVEEKGNLYGVGEFFKGDIFKLDYYEKFL 136 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q I + + I+ +I+ +F+ +D I + Sbjct: 137 GDIQKYAI------------LLASGLRGIFDKGMQLFSDILLIILIVFYLLKDEEKIKEN 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + I + +V+ S LG +A+ L++ Y + G+ S + L + Sbjct: 185 IVNIFPGKYKYKLYDIVKESDEVLSSYILGQAKVALSLALMVFIGYKIIGMASPLLLSSV 244 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 T ++A IP + + I L + I + + + P ++G + + Sbjct: 245 TFVLAFIPFVGFFISMIIPYIIAIALGWSMIIKLSILVIIAQTLKGRIIVPLIMGKTMNI 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + F +VG +G +G F+ + +L VI+K ++E ++ Sbjct: 305 HPITDIFLVVGAASLVGPIGAFVVVPIYSLGKVIFKYFNKEVEEKLKEFKE 355 >gi|187920077|ref|YP_001889108.1| hypothetical protein Bphyt_5379 [Burkholderia phytofirmans PsJN] gi|187718515|gb|ACD19738.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 650 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 101/328 (30%), Gaps = 16/328 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVMCLFI 75 +++ LYF + P+ ++++ F P+ S F+AV+ ++ + Sbjct: 32 VVVVCGLYFGRAVLIPITLSVLLSFLLAPLVQMLRRFHMGQLPSIFIAVLFALASLLAVG 91 Query: 76 VPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSH 129 + ++ + + K+ + + L S Sbjct: 92 ALITAQLVQLAADLPQYQEAIEQKIETVQEKTVGRADSLMSRAAVALQRVSPPKPNPPRP 151 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-----SIIFMIIALFFFYRDGFSI 184 + + + + L + + I +++ +F + Sbjct: 152 TGRAARNAPAVPQPVEVHEPAPTPMQLAQRALSPAIAPIETTFIVLVVTIFILLQREDLR 211 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + G I+ ++ R F+ + + G V+ + GVP + Sbjct: 212 DRLISLFGSRDLHRTTTAINDAAVRLSR-YFVAQLGVNLSAGGVIAIGLAIIGVPGALLF 270 Query: 245 GVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI A++ +P ++++L I+ A + + + + P L G Sbjct: 271 GVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDVVAGQIAEPLLYG 330 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L L + G +GL + Sbjct: 331 HRSGLSPLAVVVAAIFWSWLWGPIGLVL 358 >gi|297529278|ref|YP_003670553.1| hypothetical protein GC56T3_0934 [Geobacillus sp. C56-T3] gi|297252530|gb|ADI25976.1| protein of unknown function UPF0118 [Geobacillus sp. C56-T3] Length = 353 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 68/188 (36%) Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 F+ +++ + +F+ +D + + + + + + V + + G Sbjct: 159 KSFIGSAATLLIIPFIVFYMLKDIDVLKKAVWYMTPKRWRGPGMTFLKDVDESLGGYIRG 218 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 + GL WLAG+ + LG + + +IP P+ ++ L ++ Sbjct: 219 QLFVCAAIGLAAALGLWLAGMDYPLLLGFVIGVTNIIPYFGPLIGAVPAVILAATVSLKM 278 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + F+ L P +VG + + L L G G+LGL + A+ Sbjct: 279 VVIVLVIIFTLQFLEGNVLSPLIVGKSVHMHPLVIMLALFAGGELAGVLGLILAVPTAAV 338 Query: 338 IAVIWKES 345 + V Sbjct: 339 LKVAIAHW 346 >gi|239928556|ref|ZP_04685509.1| hypothetical protein SghaA1_10043 [Streptomyces ghanaensis ATCC 14672] gi|291436882|ref|ZP_06576272.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339777|gb|EFE66733.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 390 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 113/357 (31%), Gaps = 22/357 (6%) Query: 8 PQGIMRWMIMFIILVSLYFL--------KGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ + R M++ + LV+++ L G VL A + P S ++ Sbjct: 9 PRWLPRAMVLALALVAVFQLGSWAFHQLTGLLINVLIAFFLALAVEPAVSWMAAR-GVRR 67 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++V+ + L ++ ++V + + + Sbjct: 68 GLGTFLVFLAVLIGAAGFVTLLGSMLAGQIIKIVEDFPEY-------LDSVINWFNTHFH 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +EL + T+++ + + A G +F + + F+F Sbjct: 121 TELRRVDIQEGLLRSDWLRTYVQNSATGVLDVSAQVLGGLFQLLTIGLF-----SFYFAA 175 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ + I ++A+ GL VP Sbjct: 176 DGPRLRRALCSVLPPARQVEVLRAWEIAVNKTGGYLYSRGLMALVSGLAHYVLLEFLEVP 235 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V +++ IP A+ + + + + A + ++ + + L+P Sbjct: 236 YAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLIFVVVYQQFENYVLQP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F +V G +G +G I +A + + + Sbjct: 296 KLTSKTVDIHPAVAFGSVVAGTALLGAVGALIAIPAIATLQAFLGAYVKRYDVTDDP 352 >gi|117919992|ref|YP_869184.1| hypothetical protein Shewana3_1544 [Shewanella sp. ANA-3] gi|117612324|gb|ABK47778.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 368 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 109/328 (33%), Gaps = 23/328 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + IIL + P + + I P + +LAVI + + L Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRV--PKWLAVILLMGFIVLMG 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + E + + + W H +++I Sbjct: 77 LWLASLVGSSINEFSKQLPQYRDQLVEQFS-----------------WVLHKLQALNIQI 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 E L + + ++ +I+ + F + S+ ++L L Sbjct: 120 SKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKL-HLALDD 178 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++I R + V + + ++++ GL++G + GV + VI + IP Sbjct: 179 PDMRLQQIDRFLQSVNQYMVIKT-LVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIP 237 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A L ++ + P +G + L L F Sbjct: 238 NIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGLSTLVVFL 297 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ M + + Sbjct: 298 SLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|295837692|ref|ZP_06824625.1| integral membrane protein [Streptomyces sp. SPB74] gi|197695937|gb|EDY42870.1| integral membrane protein [Streptomyces sp. SPB74] Length = 365 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 114/338 (33%), Gaps = 21/338 (6%) Query: 11 IMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ ++ + V ++ LK P+L A++ P+YS + + + A + Sbjct: 14 VLALLVTGVAAVGVWLCVELKTAVTPILLAVLGTALLRPLYSLLVRRAHVQRSLAAGLTC 73 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V+ + + ++++ + A W T Sbjct: 74 AAVVAAVGGAGYIVTSAIVDNGQQILDSIRSAFDD------------AASWVGAGHTSLD 121 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L F T I + + + + + ++ +FFF RD Sbjct: 122 DITHNARQLLNKFGGTAATGVINGLS-----VVGSFVATAVLALLLMFFFLRDAGRALHA 176 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + ++R + + G TIIA+ + + + VP + LG + Sbjct: 177 LRELSPGGSSDLVEAMARRAYQAVAGFMHGTTIIALIDATFITIGLLVLRVPGALGLGAL 236 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP GA +S + L A + + L+P + ++ Sbjct: 237 VFLGAYIPYLGAFLSGAVAILVALADRGFVIALWVLGVVLAVQVLEGHLLQPVVQSRTVQ 296 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G G+LG+ + L A I++E Sbjct: 297 MHPAVVMVTITAGASLAGILGMLLAVPLTAAAFGIFRE 334 >gi|186682624|ref|YP_001865820.1| hypothetical protein Npun_R2290 [Nostoc punctiforme PCC 73102] gi|186465076|gb|ACC80877.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 383 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 117/339 (34%), Gaps = 17/339 (5%) Query: 13 RWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+ + I++SLY L + + +A+++ T + F + F ++A Sbjct: 5 QWIGLIAIVLSLYILWQIREVLLLMFAAVVLATTLNRLAKRF-QRFGMKRGFAVLLAVAI 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +EL +V WL + ++ Sbjct: 64 FFAGIVGFFWLIVPPFAQQFQELTYQVPKGFGR---FNTWLDAL--RTHIPNELVPYIPD 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 SL ++ F+ + + + F L+ L I+ +++ D + + Sbjct: 119 INSLIQQAQPFV-----NRLLGNSFAFVSGSLEVVLKILLVLVLTGMMLADPLAYRKVFV 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + I + G I G++ + GV + +AL ++ Sbjct: 174 RLFPSFYRRRVEGILNKCEVSLEGWITGAFIAICVVGVMSLVGLSILGVKAALALAILAG 233 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +IP G +S + + A + + I + + P ++ + L Sbjct: 234 FFNLIPNLGPTMSVIPAMAIAFLD-EPWKAIAVLILYFIIQQVESNFITPVVMAHQVSLL 292 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + V G LGLF+ + + ++A IW + ++ Sbjct: 293 PAITLIAQLFFVTFFGFLGLFLA-LPLTVVAKIWLQEVL 330 >gi|196233557|ref|ZP_03132399.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] gi|196222409|gb|EDY16937.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] Length = 347 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 97/292 (33%), Gaps = 17/292 (5%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + + + ++ F+ L L + +LV+ + + + ++ +P Sbjct: 48 RWGWPRWAGIGVALLIVLAFVALLGLLIPGLAGQAGKLVAHLPDVQK------QVVTQLP 101 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G E+ K L + G + L+ + M++ Sbjct: 102 GSGPLPEIANKLLQSASFSDPDAVIGKFVTGA-----------AVALEVVSQFLVMLVIA 150 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + DG I Q L + + +++ S + +V+ +G I + G Sbjct: 151 VYLLVDGSRIFQWLLAFLPRAQRSKFREASPKIAQVVSRFIVGQFICSTLAGTYAFVVLS 210 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 VP+ + L ++ AI ++P F ++ + + A + + Sbjct: 211 CLHVPNAILLALVAAIFDILPILGFFLFIIPAVGMAFTVSPVVAGAVAALYGAYHLMEAY 270 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P + G +KL L + G G +G ++A V+ K + Sbjct: 271 FIVPKVYGEQLKLSTLTVLLSCLAGWLLGGPVGAVAILPVVASYPVVEKIWL 322 >gi|169349890|ref|ZP_02866828.1| hypothetical protein CLOSPI_00629 [Clostridium spiroforme DSM 1552] gi|169293458|gb|EDS75591.1| hypothetical protein CLOSPI_00629 [Clostridium spiroforme DSM 1552] Length = 300 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 97/299 (32%), Gaps = 21/299 (7%) Query: 65 IATVSVMCLFIVP-LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL- 122 I+ + ++ I+P L+ + + + ++ + +L Sbjct: 2 ISLLGLIVSIIIPNLVESLISLVSNISSFLVNIIDNIDEIFKYLNIDFRMEDIGSIKDLI 61 Query: 123 ---WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + SH ++ S + N +F+ +F + F + Sbjct: 62 NMPWQETFSHILNILTKSAGGIMANATNFLAKFGAIFSGFTFSL------------YLLG 109 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW----L 235 D QL + +F KI F + E +L Y+ L Sbjct: 110 DKEKFILQLRKIIGAIFGYQITKIIFNYGHRTNQIFSDFIGGQLTEACILWILYYTTMRL 169 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G P + I A+ +P PI+ V +L++ + A ++ I I D Sbjct: 170 FGFPYPELIATIIALFCFVPFFGPIASMFVGAFLILSKDSLMAIWFIIYFQILSQIEDNF 229 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P +VG + LP + + G+ G+ I A + + + + + ++ Sbjct: 230 IYPKVVGNSVGLPGIWVLLSIFAFGDLFGIFGMVIAVPSAACLYALIRGLVNKALKKRK 288 >gi|218235427|ref|YP_002366643.1| hypothetical protein BCB4264_A1926 [Bacillus cereus B4264] gi|218163384|gb|ACK63376.1| putative membrane protein [Bacillus cereus B4264] Length = 337 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INEMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|168700128|ref|ZP_02732405.1| hypothetical protein GobsU_11410 [Gemmata obscuriglobus UQM 2246] Length = 606 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 108/340 (31%), Gaps = 15/340 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ ++ L++ + F PV A+ F P+ + + AVI TV + Sbjct: 13 LAATVVGAALVAVLFWARSIFIPVTLAVFFAFVLSPVVNRLQRRGIGRP--AAVILTVGL 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + + + + E ++ + Q V +W++ GG + Sbjct: 71 LGLTGLGIGTVIAQQITRVAETSAEKRESIKQKLTSVKQWIAG--GGESQFGKLVDDVED 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQ 186 + + P A+++ + + F I F + Sbjct: 129 VFASAKPASNSNAVVVEQASPSMAAQWSGMLSPAAEVLGQAAFTFILTVFMLLKREDLRN 188 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L K + I L ++ G ++ + + GV + G Sbjct: 189 RMIRLLGAGKITTTTKAVDDASQRISKYLLSQLMVNTAFGAIITISLFALGVKYSILWGF 248 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIK-----GNIFNATCLFLWGAIELFIVDKTLRPFL 300 I +M +P G + ++ + G + I + + P L Sbjct: 249 IATLMRYVPYIGTWVGLIPPLLFSVATAPEWGGGWGQPVAVLALFLGLEAICNNLVEPKL 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFI-GPVLMALIA 339 G + L + G +GL + GP+ + L+ Sbjct: 309 YGQSMGLSEVAQLVSAAFWAFMWGPIGLILSGPLTVCLLV 348 >gi|160935591|ref|ZP_02082966.1| hypothetical protein CLOBOL_00481 [Clostridium bolteae ATCC BAA-613] gi|158441335|gb|EDP19045.1| hypothetical protein CLOBOL_00481 [Clostridium bolteae ATCC BAA-613] Length = 380 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 104/324 (32%), Gaps = 14/324 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY--- 83 L FF P + +I + P+ + + +++ + + L I L L Sbjct: 36 LLKFFMPFVIGWVIAMIANPLVRFLERRVKLVRRHSSIVIVAAALALVIGLLYLLVSRTF 95 Query: 84 ----YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 ++++ L + + + L D + + + E Sbjct: 96 VLLRQFIIDLPGLYAGIEGDVARSMEQLEHLFDFMPDSIQQSWAQFGNNLGSYMGTVVEK 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 A + + I++ +FF D I + + Y Sbjct: 156 IASPT-----VEAAGTVAKSLPAMLVYTVVTILSAYFFIVDRDRILAAIKAHMPQWAGRY 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + V +I F+ I L+L + + GV + A + +P G Sbjct: 211 GLYLKGEVRHLIGGYFMAQFKIMAVVWLILTVGFIVLGVGYGPLWAFLIAFLDFLPVFGT 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + L+ G A L L + + + ++P LVG + LP L T F L Sbjct: 271 GTALLPWGLIKLLGGEYAFAAGLLLIYVLTQ-VTRQIVQPKLVGDSMGLPPLLTLFLLYL 329 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G + G+ G+ + + L ++ Sbjct: 330 GFKADGIAGMILAVPIGLLFVNLY 353 >gi|307824016|ref|ZP_07654243.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307734800|gb|EFO05650.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 366 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 107/356 (30%), Gaps = 13/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + NPQ + +I+ V +Y L PV ++++ + + S S Sbjct: 18 KRFLPNPQAVALAIILIASFVLIYSLSDLLMPVFVSIVLAYLLEGLVSKAES-MNMHRLP 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L +L + ELV ++ L ++ + + Sbjct: 77 AVYLVFSVFMACLGFLLFYLIPMVSQQAVELVQQIPEILNRAQTGILRLPEMYPKLVSES 136 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + Q + + ++ + + + + + + +FFF +D Sbjct: 137 KIQQIMFAVQRELLTY--------GQNVLSLSAASVVGLVSVMIYLFLVPMMVFFFLKDK 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ V I + G V Y G+ Sbjct: 189 QMLIAWFLQFMPR-DRNLTVRVWEEVDTQIGNYVRGKFGEVFILWAVSYVTYATMGLNYA 247 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRP 298 + L V+ + +IP GA + V + + + + +I + L P Sbjct: 248 MLLAVLMGLQVIIPYVGATLVTFPVLGVAYFQWGLGGDEFMYVVIAYSIIQALDGVVLVP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L + ++ G G+F+ L ++ + + + Sbjct: 308 VLFSEAVNLHAVAIIVAILLFGGLWGFWGVFLAIPLATVVKAVLTAWPRIGDNSLD 363 >gi|238922675|ref|YP_002936188.1| hypothetical protein EUBREC_0250 [Eubacterium rectale ATCC 33656] gi|238874347|gb|ACR74054.1| protein of unknown function UPF0118 [Eubacterium rectale ATCC 33656] Length = 388 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 107/339 (31%), Gaps = 17/339 (5%) Query: 31 FAPVLSALIIGFTSWPI---YSS---------FISKKEES---STFLAVIATVSVMCLFI 75 P++ +++ + P+ Y K + +I+ ++ + + Sbjct: 52 LMPIIMGIVLAYLINPMVEFYDRKLSNSLGKAIEKKCGKRPSMRGLSILISLAIIIAIIV 111 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V ++ + + + VS + Q + L+ A E+ T+ ++ S Sbjct: 112 VLIMMVVPQLVSNITNAVSLLPDQIQDLVKKITELAK--NNDRAKEIITELYNNGISYFT 169 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + F+ ++ ++ I I L + + + Sbjct: 170 EWVKDNMLGQVTFVINGIMGIFGTAVNCLVAFIVAIYVLLSKDTFKRQTKKLVSAFLPER 229 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 I + K+ G I ++ G + + +P + VI + +IP Sbjct: 230 HIQVLSSILKESDKIFGGFISGKIIDSLIIGAICFVCCLILRMPYVALISVIVGVTNVIP 289 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S L++ + L+ I + + P ++G L F Sbjct: 290 FFGPYIGAIPSTILIMLDSPSKGVIFLLFIIILQQVDGNIIGPKILGESTGLSPFWVVFA 349 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++GLFIG ++ + K + KE Sbjct: 350 IFLGNGLFGVMGLFIGVPTWGVVYYLIKRYVNYRVRKKE 388 >gi|229020662|ref|ZP_04177393.1| hypothetical protein bcere0030_51380 [Bacillus cereus AH1273] gi|229026874|ref|ZP_04183199.1| hypothetical protein bcere0029_51400 [Bacillus cereus AH1272] gi|228734426|gb|EEL85095.1| hypothetical protein bcere0029_51400 [Bacillus cereus AH1272] gi|228740635|gb|EEL90902.1| hypothetical protein bcere0030_51380 [Bacillus cereus AH1273] Length = 347 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 98/284 (34%), Gaps = 8/284 (2%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ Y ML ++ I + + + + ++ + Sbjct: 66 IIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHME 125 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G+D + + + G L LS+I + FF + I E Sbjct: 126 LSKYVGQGVDILYKSITNVGKFGLQVLLSVILSL----FFLLEKARIVAFTSKFKESRLA 181 Query: 198 AYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ +I K RS +IAI ++ A W+ G P + L ++ ++ +I Sbjct: 182 IFYNEIEYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLI 241 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G IS + + G I + + + + L P + LP TF Sbjct: 242 PVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTF 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ +G+ GL IG + + + + ++++ EK Sbjct: 302 MILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVEKNK 345 >gi|149190262|ref|ZP_01868536.1| permease PerM [Vibrio shilonii AK1] gi|148835869|gb|EDL52832.1| permease PerM [Vibrio shilonii AK1] Length = 356 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 114/340 (33%), Gaps = 14/340 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + +I+ +++YF AP+L A+++ + WP+ + T V Sbjct: 15 DPDAVSLVVILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSK--LCALGVPRTLSVVA 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++ + L ++ L++ + + ++++ IP Sbjct: 73 VILLFISLMLLAIFGLVPTIWNQVGNLLNDIPNMYNG---MQQFVATIPERYPDLAEIHL 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++K + + S + +I + + +FF +D + Sbjct: 130 VETIMGNVKDKVLVLGENVVKGSLASLVS-----LAALAVYLILVPLLVFFLLKDKEEMV 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + K+ + + I + G + + G V + + + V L Sbjct: 185 SMASGVLPR-NRRLANKVWIEMNQQISNYIRGKVLEILIVGTVSYVTFAILDLRYSVLLA 243 Query: 246 VITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +IP GA V+ + L G L + I + L P L Sbjct: 244 VLVGFSVLIPYIGAAAVTVPVAMVGLFQWGLAPQFYWLLVAYGIIQALDGNVLVPVLFSE 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G G+F L L+ +W Sbjct: 304 AVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWN 343 >gi|83748965|ref|ZP_00945974.1| Hypothetical Protein RRSL_01236 [Ralstonia solanacearum UW551] gi|207721704|ref|YP_002252143.1| permease transmembrane transport protein [Ralstonia solanacearum MolK2] gi|207744194|ref|YP_002260586.1| permease transmembrane transport protein [Ralstonia solanacearum IPO1609] gi|83724388|gb|EAP71557.1| Hypothetical Protein RRSL_01236 [Ralstonia solanacearum UW551] gi|206586866|emb|CAQ17451.1| permease transmembrane transport protein [Ralstonia solanacearum MolK2] gi|206595599|emb|CAQ62526.1| permease transmembrane transport protein [Ralstonia solanacearum IPO1609] Length = 356 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 121/346 (34%), Gaps = 14/346 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T + + + I L L L P + A I+ + P + Sbjct: 7 TQDTKRTLAWIAVAVIFLALLKLLAPTLTPFVFAFILSYILHPGVEWLQRHRVPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V + L ++ L L ML + ++ + + A + +P + +E+ Sbjct: 62 ----VLGVFLMVLLLAVLAVALMLLILAVLQREIPAIREQLPGMLSKLNAAVTPRLAEMG 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 L+ L L ++ D + + G + + + I +F+ D Sbjct: 118 VHVRFDFPGLRKLLTEQLASSPEDVMSTALNYLRVSGSAAVQLLGIVFLVPIVMFYLLMD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++L+ + + ++++ ++ G I+ + + S LAG Sbjct: 178 WNMLMRRLEGVVPRRWIGKTRELAAETDGLLSQYLRGQIIVMLVLAVYYSSGLALAGFDV 237 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ T + IP ++I LL GN++ + + I + L P Sbjct: 238 ALPIGIFTGLAVFIPYIGFGIGLTLAILSALLQFGNLYGLLAVAVVYGIGQVLEGFYLTP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LVG I L L L+ + G G+ + + A++ V ++ Sbjct: 298 RLVGERIGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|258509137|ref|YP_003171888.1| permease [Lactobacillus rhamnosus GG] gi|258540340|ref|YP_003174839.1| permease [Lactobacillus rhamnosus Lc 705] gi|257149064|emb|CAR88037.1| Permease [Lactobacillus rhamnosus GG] gi|257152016|emb|CAR90988.1| Permease [Lactobacillus rhamnosus Lc 705] gi|259650424|dbj|BAI42586.1| putative transporter protein [Lactobacillus rhamnosus GG] Length = 358 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 123/344 (35%), Gaps = 23/344 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + Sbjct: 5 EKFINNVPVRRTVVLFSVFLVLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHVRP--- 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V V+ ++I+ +L L Y + + ++ + + V + + Sbjct: 62 ----FVIVVPVYILVILGLIYAAVHYVPAIIHQTITLFNS---VQDFYNSDAFANNQVMQ 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + +L +T G+ + +A G + L LS I FFF + Sbjct: 115 WVLQSTKSLNLTEQLKT-----GLSTVLEYAGNIGAMGLTLVLSFILS----FFFTIELD 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ + F Y+K + K I + IA+ ++ +P Sbjct: 166 SLPAFGQLFLDSPFGWYFKDLRYFALKFINTFGVVMEAQIFIAVVNTVITTITLLFMKMP 225 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +L ++ ++++IP GA IS ++I G + + + A + L P Sbjct: 226 NIPSLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVITILIMIAAIHVLEAYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ R G GL +G + + Sbjct: 286 KFMSSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 329 >gi|283795713|ref|ZP_06344866.1| membrane protein [Clostridium sp. M62/1] gi|291077393|gb|EFE14757.1| membrane protein [Clostridium sp. M62/1] Length = 398 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 118/350 (33%), Gaps = 23/350 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSF-----------ISKKEESSTFLAVIATVSVMCLFI 75 L+G AP++ I+ + P+Y+ + ++ + + T + + + Sbjct: 43 LRGIAAPIIYGSILAYLLAPVYNRVTGAGLRVLSGRLKSRKHAEVIARAVGTAASLAVIF 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELW------TKHLS 128 V + L + ++ + + A + + W+ + E T Sbjct: 103 VVIAGLLQLIIPQVVDSIMGFQAAFPTYLQNLYSWIQKLLADNSEIEQIVIGNIQTAVSL 162 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ F ++F+ +S + ++ + + +I + + + Q Sbjct: 163 FDGWLEQAFTRFDMNRLVEFLTGVSSSL-FLLFNFVKNWLIGLIVMVYMLNIKDRLITQA 221 Query: 189 DSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + R+V ++ +G + ++ G++ + P + + Sbjct: 222 KKIVYGCLSIRLANHVISEMRLVHRMFGGFIIGKILDSLIIGILCFIGTSILHTPYALLV 281 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +IP P S L++ + L LW I I + P ++G Sbjct: 282 SVIVGVTNVIPFFGPFIGAIPSGILVLLVSPVQCAVLLLWILILQQIDGNIIGPKILGNS 341 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L F ++ G +G+ I A+I + K+++ K+ Sbjct: 342 TGLASFWVLFSILIFGGLFGFVGMIIAVPGFAVIYDLVKKAVNYSLRRKQ 391 >gi|324014572|gb|EGB83791.1| hypothetical protein HMPREF9533_01419 [Escherichia coli MS 60-1] Length = 376 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 113/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPRFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFF 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|227496553|ref|ZP_03926833.1| membrane protein [Actinomyces urogenitalis DSM 15434] gi|226833968|gb|EEH66351.1| membrane protein [Actinomyces urogenitalis DSM 15434] Length = 394 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 124/341 (36%), Gaps = 25/341 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ I +YFL+ P AL + T P+ + ++ +A + ++ F+ Sbjct: 25 LLVIGGAGVYFLQDLLGPAFFALTLVITVRPLVAWASRHHVPRP--VSAVAAIVIVYTFV 82 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + ++ E + + A L TK +L Sbjct: 83 LALFAALGVAVAQLVETLPGYSSKFEA------------IWEDAEGLLTKLGVDQSTLFD 130 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + T+ + A + ++ M + + F D I + ++L Sbjct: 131 QVSSMIDTS---RVVSLAQGLLGQLTSFGSLLMIMALTIVFLMFDMSRIEVRAEALLR-- 185 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +RS +L T+ + ++ A + GVP V GV++ I IP Sbjct: 186 LKPEISTALADFARSVRSYWLVSTVFGLIVAVLDVIALGVLGVPMAVTWGVLSFITNYIP 245 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + ++ L+ + A + + + F++ ++P G + L TF Sbjct: 246 NIGFFVGLIPPALLALVDSGPWTALWVIVAYVVLNFVIQTLIQPKFTGDAVGLNTTTTFL 305 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ + +G LG ++A+ ++ ++++ + + + Sbjct: 306 SLMFWSQVIGALG-----TILAVPLTLFVKAMLIDSDPRAR 341 >gi|229190050|ref|ZP_04317057.1| UPF0118 membrane protein [Bacillus cereus ATCC 10876] gi|228593439|gb|EEK51251.1| UPF0118 membrane protein [Bacillus cereus ATCC 10876] Length = 337 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|219850625|ref|YP_002465058.1| hypothetical protein Cagg_3786 [Chloroflexus aggregans DSM 9485] gi|219544884|gb|ACL26622.1| protein of unknown function UPF0118 [Chloroflexus aggregans DSM 9485] Length = 386 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 127/356 (35%), Gaps = 17/356 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +++ +I+V L+ + P + A+I + P+ + S + Sbjct: 17 ITSAIVVGLIIVFLHEITHILPPFIGAIITAYLFNPLIGWLHRRTGISRAIW-------I 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L++V L+ +V + + R L+ + L +S Sbjct: 70 VILYVVAGSVLYSLFTALWPRIVQQSRDLAASAPMIIRELTIWFEQNESIVLGDMVISLA 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L ++ ++ + L+ + ++ +I F+ + + + Sbjct: 130 PLEAQVIG--LISDVAGWLSGNVPKIVFSALESVIYLLVYLIITFYLLLQAPQLKEWARN 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + +V + G I+ + ++L + VP + + + + + Sbjct: 188 LIPSPYRREIAHLGYQIDRVFNAYIRGQLILIVIMSVLLYIPLSILQVPYALVIAIASGV 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++P P S +++ + + N+ L + + I D + P ++G Sbjct: 248 LEILPIIGPWSAAGIAMTVALFQPVTPFGLSNVSLVILLGVIYFVLRQIEDHFIIPNVMG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++L F ++ G G GLFI + A+I +I + + E +S Sbjct: 308 PLVRLHPGVVIFAILAGGALAGAFGLFISIPIAAVIRIILSYLYRKLTDQPEPPAS 363 >gi|309812879|ref|ZP_07706611.1| putative membrane protein [Dermacoccus sp. Ellin185] gi|308433157|gb|EFP57057.1| putative membrane protein [Dermacoccus sp. Ellin185] Length = 456 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 23/312 (7%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 + P S F + + + C + + E++ L+S Sbjct: 63 LAAAIEPAVSRFAMHMP--RALATGLVVLLLACAVVGFFAAFGGLLVDEVQALISAAPGL 120 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + W++ K + K+LS L + + + + Sbjct: 121 VTDCV---DWVNR------------KFDTDYDINKLLSSVNLTPDNVANYGSQLAGGVLG 165 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + +S F + L FF + +L + LFP +++ V +V + G Sbjct: 166 LVTSVVSTAFNLFVLIFFTCYISAGLPRLRTWVAGLFPPRQQRVVLTVWEVFVAKVGGYV 225 Query: 220 IIAIGEGLVLGSA----YWLAGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKG 273 + + L G+P +ALG+ T I+A +P G IS + Sbjct: 226 AARFILATISATIHCTFMMLIGMPYWLALGLWTGIIAQFVPNIGTYISIVLPVLVGATSD 285 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 N + ++ + I + T+ P + + + +F + G GL G +G Sbjct: 286 KPINGLFVLIFAIVYQQIENVTIEPNISARAVDVHPAVSFASALAGANMFGLAGGLLGVP 345 Query: 334 LMALIAVIWKES 345 A I Sbjct: 346 AAATAMAILDLY 357 >gi|300764159|ref|ZP_07074154.1| hypothetical protein LMHG_10132 [Listeria monocytogenes FSL N1-017] gi|300515149|gb|EFK42201.1| hypothetical protein LMHG_10132 [Listeria monocytogenes FSL N1-017] Length = 348 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 114/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVHVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|291545214|emb|CBL18323.1| Predicted permease [Ruminococcus sp. 18P13] Length = 450 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 117/341 (34%), Gaps = 36/341 (10%) Query: 8 PQGIMRWMIMFIILVSLYFLKGF-------------FAPVLSALIIGFTSW--------- 45 P+G+ ++++ ++ + L F APV + L+ + Sbjct: 21 PRGLAAFLVLACAIIFYFLLLNFDKVQSFFEDVFRAIAPVFTGLLFAYLLNPAVVMLEKH 80 Query: 46 ---PIYSSFISKKEESST---FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VL 98 P+ F + + T + ++V+CL ++ + + + + ++ Sbjct: 81 LAKPLNRRFKNSSKGKKTARIISTFVTVIAVVCLIVLLFVLVVPEVAGSITAIAGELPND 140 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 + V + + + L + +L+ P L+ + + + N ++ AS M Sbjct: 141 LGEFTDTVNQKVQNNSRLSALYSLVSNYLAEP--LENWANSGILNNASVWVGYLASGI-M 197 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYWKKISRIVPKVIR---ST 214 + ++ +I F+ +Q + L P I + R S Sbjct: 198 GAFNLVYNLCVGLIICFYLLIGKERFMRQGGKILYVLLKPNRADWILHRLNGANRTFSSA 257 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 LG + +I G++ + P + VI + +IP P S L++ + Sbjct: 258 ILGKILDSIIIGMLCFIGVVILRTPYPALIAVIVGVTNVIPFFGPFIGAIPSTLLVLMHD 317 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 A ++ + L P +VGG I LP + F Sbjct: 318 PVKALYFVIFIVVLQQFDCNILDPKIVGGSIGLPAFWSLFA 358 >gi|256845707|ref|ZP_05551165.1| permease [Fusobacterium sp. 3_1_36A2] gi|294785046|ref|ZP_06750334.1| permease [Fusobacterium sp. 3_1_27] gi|256719266|gb|EEU32821.1| permease [Fusobacterium sp. 3_1_36A2] gi|294486760|gb|EFG34122.1| permease [Fusobacterium sp. 3_1_27] Length = 362 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 119/327 (36%), Gaps = 8/327 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V+ +F + L + + Sbjct: 37 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIAFVVLIFTILSLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L + ++ + ++ + ++T ++ S TN Sbjct: 97 SLKVLNNIYPYISEKATTMG---KNLVDYLAEKNIYTVNMDEVNSYFTNFIANNVTNIRK 153 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 + + + ++ + F D +++ L+++ +F Y Sbjct: 154 IVSALFGSLVDWTIGFT-NLFLAFVLAFLILLDKKHLTKTLENIIIIIFGVKNTPYIMNK 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ ++ + G I++ GL + + G P V+ + MIP I Sbjct: 213 LKLSKEIFLNYVSGKLIVSAIVGLCVYIVLLVTGTPYAALSAVLLGVGNMIPYVGSIIGG 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ +L++ L + I + + P ++G + L ++ Sbjct: 273 IIAFFLILLVAPIKTIVLLIAITISQLVDGFIVGPKIIGNKVGLNTFWVMVSMIIFGNLF 332 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+F+G ++++I + + + + A + Sbjct: 333 GIVGMFLGTPILSIIKLFYVDLLKAKQ 359 >gi|220906874|ref|YP_002482185.1| hypothetical protein Cyan7425_1453 [Cyanothece sp. PCC 7425] gi|219863485|gb|ACL43824.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 384 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 126/353 (35%), Gaps = 33/353 (9%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAV 64 ++R++++F ++ L +F +++ I + + + Sbjct: 15 QNSTLLRYLLLFGCGWAIVVLINYFYGMIALFTIAGIFAALLNYPVVWLSRYLPRGIAIA 74 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWASEL 122 + + LF+ + + + + + L++ + A+Q+ +P L+ + L Sbjct: 75 LTFTIAVLLFLGFVTLVGLEVLNQGQSLLANLKDTIADQNILPFQDLLNRLEINKLIGTL 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T S +++IF + + DG Sbjct: 135 QTGLAS------------------------GLDIVRNVFSSVMTVIFGAVICLYMLIDGE 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L L A + ++I + G ++ + + + GV + Sbjct: 171 KLWLSLLQLLPT---ASRDRFAQIFQRSFLGFLRGQLLLMVFLFTTCLVVFTILGVKYAL 227 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +I ++ IPG GA + V + +A + + + + I D LRP ++ Sbjct: 228 ILALILGLVDAIPGIGATLGVILVGLLAAASQGFDSAIQVVVGAIVMIQIQDNVLRPKVM 287 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G ++L + F L G R GLLG+F+ + +I IW +++ ++ E Sbjct: 288 GNALELNPVMLFLSLFIGERIAGLLGIFLAVPIAGMI-AIWLQTLNQEQQELE 339 >gi|53728982|ref|ZP_00134350.2| COG0628: Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208241|ref|YP_001053466.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae L20] gi|303251430|ref|ZP_07337606.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252319|ref|ZP_07338485.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307256787|ref|ZP_07538566.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261245|ref|ZP_07542920.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097033|gb|ABN73861.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302648778|gb|EFL78968.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649662|gb|EFL79842.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864835|gb|EFM96739.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868976|gb|EFN00778.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 353 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 15/354 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 ++ +PQ + I+ I +YF P+L A++ + WPI K Sbjct: 10 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPR-- 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + V+ FI FLF + + + V+ + + WL +P Sbjct: 68 ---LLSLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPE 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S LK F ++ + S G+ + + ++ FF + Sbjct: 125 LIDYAMLDSLMNMLKEKILGFGESLLALSVNSIISLVGLGIYAFLVPLMV-----FFLLK 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + I + G + + G+V + + Sbjct: 180 DKPLFVRGFIKFLPK-NRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAILLFFDLR 238 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V + +IP GA + V++ L G + L L I + + Sbjct: 239 YPLLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVV 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PFL + L L ++ G G+F L L+ + +E Sbjct: 299 PFLFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 352 >gi|116495596|ref|YP_807330.1| permease [Lactobacillus casei ATCC 334] gi|191639078|ref|YP_001988244.1| Predicted permease [Lactobacillus casei BL23] gi|239629996|ref|ZP_04673027.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067135|ref|YP_003789158.1| putative permease [Lactobacillus casei str. Zhang] gi|116105746|gb|ABJ70888.1| Predicted permease [Lactobacillus casei ATCC 334] gi|190713380|emb|CAQ67386.1| Predicted permease [Lactobacillus casei BL23] gi|239527608|gb|EEQ66609.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439542|gb|ADK19308.1| Predicted permease [Lactobacillus casei str. Zhang] gi|327383142|gb|AEA54618.1| hypothetical protein LC2W_2287 [Lactobacillus casei LC2W] Length = 357 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 122/361 (33%), Gaps = 23/361 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + Sbjct: 5 EKFINNLPVRRTVVLFSVFLLLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHIRP--- 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +VP+ L G++ ++ G+ + + Sbjct: 62 ---------FVIVVPVYILVILGLVYAAVHYVPAIIHQTIGLFNS-------VQNFYNSE 105 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + Q + +++ T + ++ L++ I FFF + Sbjct: 106 AFANNQVMQWVLQSTKSLNLTEQLKTGVTTVLQYAGNIGAMGLTLFVSFILSFFFTIELD 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ + F Y+K + K I + IA+ ++ +P Sbjct: 166 SLPAFGQLFLDSPFGWYFKDLQYFAMKFINTFGVVMEAQIFIAVVNTVITTITLLFLKMP 225 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +L ++ ++++IP GA IS ++I G + + + A + L P Sbjct: 226 NTPSLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVLTILIMIAAIHVLEAYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +LP TF L+ R G GL +G + + +A +K+ + Sbjct: 286 KFMSSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVLGVKKIAGTAHKQSTYA 345 Query: 359 N 359 + Sbjct: 346 S 346 >gi|229494234|ref|ZP_04387997.1| integral membrane protein [Rhodococcus erythropolis SK121] gi|229318596|gb|EEN84454.1| integral membrane protein [Rhodococcus erythropolis SK121] Length = 392 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 116/336 (34%), Gaps = 14/336 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ + L+ PV AL+ PI S ++ ++ + L Sbjct: 33 LLVLGYVVLRLETVLIPVGLALLTSALLIPIVDRLQVWGVPRSA-AVIVVLLASIGLVAG 91 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + F+ + + +L + + + WL+ P ++ S +S++ Sbjct: 92 IMTFVVEQFIDGLPQLTDQFTASVTQ---IQNWLTSGPLHFSEDQIRQAGDSVVKSVQSN 148 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E+ A+ G IF L+ + L FF G I Q + + Sbjct: 149 RESLTSGA-----LTTATVIGEIFTGALLT----LFTLIFFLYGGDQIWQFVTRIVPTDA 199 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + +A + + +G+ + GVP + L + I A IP Sbjct: 200 RRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLALPLASLVFIGAFIPI 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA ++ + L+ A + + + ++P L+G ++L L Sbjct: 260 VGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLLGRAVRLHPLAVVLA 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ G++G + ++A++ + + + Sbjct: 320 ITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDPD 355 >gi|327537952|gb|EGF24648.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 370 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 116/328 (35%), Gaps = 9/328 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++L +LY+ + PV +A+++ T PI + S A+ ++ + Sbjct: 1 MLVLYALYYARSLVIPVATAIVLYLTLRPI-VRHAKRIGVPSPVGAIGIIAGILLTLGLG 59 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + +A Q + L D+ EL + Sbjct: 60 TYLVLEPAKETIGAAPQHLAVAKQKLSFITDRLKDVDQAT--EELAETEDVAAGEVASEK 117 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++ + ++ G + L+I + L+F G + + + + Sbjct: 118 PVPVEIKQPTWTSGWSYLSGTGNVVSFLTICIAL--LYFLLATGDDLLRSVMRSLPNFSS 175 Query: 198 AYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ V + + S ++ I G G+ + W+ G+PS + GV+ IP Sbjct: 176 RRKLVEVIENVQEGLGSYLAQVSAINAGLGVCVAVVMWMLGMPSPIMWGVMAFAFNFIPI 235 Query: 257 GAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I + + LL + A + L + + + P ++G + + + F Sbjct: 236 VGAIAGALIIFFVALLNFEPTYYAFVVTLAFMTLTSLEGQFITPAILGRSMSMSPVLVFL 295 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 +V G++G+F+ P+L+A Sbjct: 296 SIVVWGWMWGIMGVFLSVPILIAARMAC 323 >gi|220913551|ref|YP_002488860.1| hypothetical protein Achl_2806 [Arthrobacter chlorophenolicus A6] gi|219860429|gb|ACL40771.1| protein of unknown function UPF0118 [Arthrobacter chlorophenolicus A6] Length = 387 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 109/306 (35%), Gaps = 15/306 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + ++ + VIA VS++ + +++ + +LV + + +L Sbjct: 86 VLKRRGINDALATVIAFVSLLVVLGGVFTVIYFSVRSQWDDLVQQASSG---LDQLQSFL 142 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 P + + + A + ++ + + Sbjct: 143 QSGPLQI-----------DEAQIDAARNAIVDFATSSQARSGAITGLSVVTEFLTGAVLL 191 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ LFFF +DG I L S + +++ +V+ G I+A+ + + +G Sbjct: 192 VVILFFFLKDGERIWSFLISPFTGDRASRLRRVGTRSQEVLGGYVRGTAIVALVDTVGIG 251 Query: 231 SAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 +A + VP + L ++ I A IP GA ++ ++ L+ A + Sbjct: 252 AALLILQVPLALPLAMVVFIGAFIPIVGATMAGILAALVALVANGPVVALIVVAVVVAVN 311 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+P ++G ++L L L G G++G + + A+ I K Sbjct: 312 QLEGNLLQPVVMGKSLQLHALVILLALTAGTLLAGIVGAVLAVPITAVAWAIIKVWTTED 371 Query: 350 KENKEK 355 + + Sbjct: 372 PQGAGR 377 >gi|239907728|ref|YP_002954469.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239797594|dbj|BAH76583.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 428 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 104/331 (31%), Gaps = 12/331 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L + F LV L G F V + I+ F ++ + Sbjct: 67 LLRTNKTLAIWAAFFGLVWLTSYYGLFGLVFTTYILCFLFSGPIEQLAARTRWPRSLWTT 126 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + + + E + K+ + + + M A Sbjct: 127 AIYLIFLAVVLTIISSVVPKIGTESAAFLKKLPDTLETLRKHLDQWAWLAPDMAAPISKV 186 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K ++L + L ++ + + + L S + M+ D + Sbjct: 187 KDYLALEALVGVKAETLFALAVNSLNQVTTYVSTFLLGTLFSFLIML--------DFPKL 238 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + SL + + +R V + V+ F +IA ++ +L G+ Sbjct: 239 RAKTISLRDSRLRDIYDVTARSVVRFAIVVGMGFRAQMMIAGVNTVLTALGMYLLGIQPV 298 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + +IP G IS + + + +A + + I L P + Sbjct: 299 GLLSTVVFFCGLIPVLGTFISSAPIVLVAVNTVGPSHALWAIVMIIVVHTIETYILNPRI 358 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 V K+ L T L G + GL G+ +G Sbjct: 359 VAAMFKISPLVTLIILYVGHKLFGLWGMVLG 389 >gi|327543545|gb|EGF29964.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 345 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 77/223 (34%), Gaps = 17/223 (7%) Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 P L + L+ F+ + + I ++I +FF Sbjct: 113 QEPDELLANAAADLRDQLEAFLRNAVATLSSELFQLGSTSIVILIYVFFLLLG------- 165 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L ++ V + +RS T+I++ G+V G A WL GVP + G++ Sbjct: 166 ------NLSGYGENTLAYQVDRQVRSYLFVKTMISLATGIVFGMALWLFGVPMALTFGLL 219 Query: 248 TAIMAMIPGGAPI---SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP PI I L G++ L P L+G Sbjct: 220 AFLLNYIPNIGPILASILPLPFILLHPDGSMLWMISAIAVTCSIQVASGNLLEPKLMGNS 279 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESI 346 L + L+ G+ G+F+ P+ A+ + + + Sbjct: 280 ADLHPVVILLALMFWGTLWGITGMFLATPITAAIKIALDRMDV 322 >gi|261369000|ref|ZP_05981883.1| putative membrane protein [Subdoligranulum variabile DSM 15176] gi|282568868|gb|EFB74403.1| putative membrane protein [Subdoligranulum variabile DSM 15176] Length = 374 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 85/249 (34%), Gaps = 4/249 (1%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 WL + M E W + L+ + T T+G+ + A + + Sbjct: 121 AWLDSLNIDMPQLESWLRSLNLNWPDLLQKATTYLTSGVSNVFSSAFGLLSSLGGIVMQV 180 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKISRIVPKVIRSTFLGMTIIAI 223 + +I + + +Q +L + P + F+G AI Sbjct: 181 VIAVIFALYLLAGKERLGRQFHALADTYLPASVCDRLWYVLATAHDTFTKFFVGQFTEAI 240 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G++ L +P +G + A++P + ++++ N A + Sbjct: 241 IIGVLCTLGMLLFRLPYAPMIGTLVGATALLPVVGAYLGAGIGAFMILTVNPLQAIGFLV 300 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + A+ + + P +VG I LP + + G G+ G+ + + A + + + Sbjct: 301 FIAVLQQLEGNLIYPRVVGTSIGLPGIWVLTAVTLGGGIGGIAGMLLAVPVTATVYRLIR 360 Query: 344 ESIMAIKEN 352 + ++ Sbjct: 361 ADVRHRRDQ 369 >gi|32473068|ref|NP_866062.1| hypothetical protein RB4377 [Rhodopirellula baltica SH 1] gi|32397747|emb|CAD73748.1| putative membrane protein [Rhodopirellula baltica SH 1] Length = 395 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 120/328 (36%), Gaps = 10/328 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ L +LY + F P+L A + + + + S A +++ +F Sbjct: 50 FLTLYALYIGRNLFMPILVAG-FAYLTLRPVVRAMGRIGIPSGVAATAIMLAIATVF--- 105 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + Y ++++ +V + ++ D + + + +++ Sbjct: 106 -GTIGYVLSGPAQDMLQQVPGSMPEVKEKLGFIFDHLETVNQATEDISDTADKENITSEE 164 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + S + + LFF G S+ + S Sbjct: 165 KP-VPVEIKQPAWTTTSPLIAGTGNAVSFVSIAAALLFFLMAAGDSLIVSVVSSLPSFSS 223 Query: 198 AY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ V + S +T I G+ +G+A WL G+PS + GV + IP Sbjct: 224 KRRFIEVLEGVQDALSSYLAWVTCINACLGVCIGTAMWLLGMPSPLLWGVAAMFLNFIPI 283 Query: 257 GAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + A+ + L+ + A + A + + + P L+G +KL F Sbjct: 284 VGAMVGIAMVFFVALVSFEHASFAFVVAGTYATLTALEGQFITPTLLGKSMKLSSALVFI 343 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 +V G+LG+F+ P+L+A++ V+ Sbjct: 344 SIVIWGWMWGMLGVFLAVPILIAVVMVM 371 >gi|160875889|ref|YP_001555205.1| hypothetical protein Sbal195_2778 [Shewanella baltica OS195] gi|160861411|gb|ABX49945.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|315268080|gb|ADT94933.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 369 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 113/331 (34%), Gaps = 29/331 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWP---IYSSFISKKEESSTFLAVIATVSVMC 72 + IIL + P + + + P + + F +LAVI + + Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRV-----PKWLAVILLMGFIV 73 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + L + + E + + + + W + H + Sbjct: 74 LMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFA-----------------WILNKLHSFN 116 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++I + L + + ++ +I+ + F + S+ ++L L Sbjct: 117 IQISKDQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKL-HLA 175 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K+I R + V + + ++++ G+++G + GV + VI + Sbjct: 176 LDDPDMRLKQIDRFLQSVNQYMVIKT-LVSLATGVIVGVGLTIIGVDYAMLWAVIAFLFN 234 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G+ I+ + I+ A L ++ + P +G + L L Sbjct: 235 YIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPKFMGRGLGLSTLV 294 Query: 312 TFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 F L+ +G +G+ + P+ M + + Sbjct: 295 VFLSLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|261418426|ref|YP_003252108.1| hypothetical protein GYMC61_0960 [Geobacillus sp. Y412MC61] gi|319767614|ref|YP_004133115.1| hypothetical protein GYMC52_2592 [Geobacillus sp. Y412MC52] gi|261374883|gb|ACX77626.1| protein of unknown function UPF0118 [Geobacillus sp. Y412MC61] gi|317112480|gb|ADU94972.1| protein of unknown function UPF0118 [Geobacillus sp. Y412MC52] Length = 353 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 68/188 (36%) Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 F+ +++ + +F+ +D + + + + + + V + + G Sbjct: 159 KSFIGSAATLLIIPFIVFYMLKDIDVLKKAVWYMTPKRWRGPGMTFLKDVDESLGGYIRG 218 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 + GL WLAG+ + LG + + +IP P+ ++ L ++ Sbjct: 219 QLFVCAAIGLAAALGLWLAGMDYPLLLGFVIGVTNIIPYFGPLIGAVPAVILAATVSLKM 278 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + F+ L P +VG + + L L G G+LGL + A+ Sbjct: 279 VVIVLVIIFTLQFLEGNILSPLIVGKSVHMHPLVIMLALFAGGELAGVLGLILAVPTAAV 338 Query: 338 IAVIWKES 345 + V Sbjct: 339 LKVAIAHW 346 >gi|148284186|ref|YP_001248276.1| putative permease protein [Orientia tsutsugamushi str. Boryong] gi|146739625|emb|CAM79414.1| putative permease protein [Orientia tsutsugamushi str. Boryong] Length = 348 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 122/336 (36%), Gaps = 17/336 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I+ ++I IIL YFL P L+A ++ + PI K + S + Sbjct: 3 VKTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLIVS 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKV---VLANQHGIPVPRWLSDIPGGMWASE 121 I V + + IV L L + LV+ + Q I ++++ Sbjct: 63 IVFVVFLTILIVAALLLMPIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNIKH 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + T+ ++ + I A ++ + + ++ F I LF+F RD Sbjct: 123 ILTEIINSWILIITH------------ILNHAWQYTITTIHSVVTAAFTGILLFYFLRDW 170 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I S+ +Y KI + + + G + + + L + Sbjct: 171 KLIINSCKSILPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFS 230 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPF 299 + +G+ + + +IP I T++++ G F + + I + L P Sbjct: 231 LTIGLFSGTIIIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPK 290 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L+G + L + +F ++ +G G+F+ L Sbjct: 291 LIGSKVGLHPIWIYFSVLTCSYYLGFTGIFLAIPLA 326 >gi|55821093|ref|YP_139535.1| hypothetical protein stu1068 [Streptococcus thermophilus LMG 18311] gi|55823019|ref|YP_141460.1| hypothetical protein str1068 [Streptococcus thermophilus CNRZ1066] gi|33313719|gb|AAQ04247.1|AF430847_14 EpsX [Streptococcus thermophilus] gi|22218127|gb|AAM94579.1| EpsX [Streptococcus thermophilus] gi|22316058|gb|AAL32508.1| CpsX [Streptococcus thermophilus] gi|55737078|gb|AAV60720.1| possibly involved in exopolysaccharide export [Streptococcus thermophilus LMG 18311] gi|55739004|gb|AAV62645.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 378 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 106/292 (36%), Gaps = 4/292 (1%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELW 123 ++ + + ++ + + ++ + ++ ++ ++ I + WL + Sbjct: 79 VSLLLAFATIGLIFTWVVFTVLPDLIDSINTLISQDRSAINNLINWLLKNKSLQKIIQDL 138 Query: 124 TKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S L+ NG+ + ++ +SI+F L + G Sbjct: 139 GGVTQVRELINSYSAQLLQQIMNGLTNFLTSLTSLPSTLINLFISIVFSCYVLVGKEKLG 198 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ +D + + I+ + F+ +I A G + + P Sbjct: 199 SQVNRLVDVYLGRY-GKTFHYVVAILNNRFHNFFVYQSIEACILGTLCYIGMRIFNFPYA 257 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ AMIP + L++ ++ A + I + P++V Sbjct: 258 ATISILIGFSAMIPVLGAYIGVTIGTILIMTHSVTLALLFVAYVVILQQFEGNLIYPYVV 317 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GG LP + + G G+LG+ + + A + I K++++ ++ K Sbjct: 318 GGSTGLPVVWVILAITIGSALGGILGMLVSVPVAATLYQIVKDNVVTREKAK 369 >gi|326801119|ref|YP_004318938.1| hypothetical protein Sph21_3732 [Sphingobacterium sp. 21] gi|326551883|gb|ADZ80268.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 351 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 111/340 (32%), Gaps = 24/340 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLS---ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I+ ++++ ++ LK F +L ++ + + K + S + + + Sbjct: 27 IISLLVIVIFILKAAFNVLLMVFAGSLMAIYFHGLANLLERKIKLSHGWCLLTGIFITLA 86 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L V FL +++ E+ + P L D+ + S++ K L Sbjct: 87 LVGVLFWFLGAKISMQVGEMTQDI----------PEILRDVRERLGRSDIGRKLL----- 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 +L + + + + ++ FF + + + L Sbjct: 132 ------FYLSDGNGEKMMKSFQDVFRTSFGVVGDMYIILFIGIFFTVNPKLYREGIIKLI 185 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + R + ++ GM I + L GVP +AL + + Sbjct: 186 PPGNKKQARDVIRRLDFTLKGWLKGMLIAMFFIASLSFIGLSLIGVPMGLALAFLAGFLN 245 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP P+ ++ + + A + L + I + P + IK+P Sbjct: 246 FIPNFGPLIAMIPAVLIGFTVSANTALLIALLYVVIQAIESNVVTPMIQNVMIKIPPALI 305 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 V G LG+ + L+ +I V+ E + + Sbjct: 306 IISQVLFGTLTGGLGIILATPLLVVIIVLVDELYVKKQRP 345 >gi|304411929|ref|ZP_07393540.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307303303|ref|ZP_07583058.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304349789|gb|EFM14196.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306913663|gb|EFN44085.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 369 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 113/331 (34%), Gaps = 29/331 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWP---IYSSFISKKEESSTFLAVIATVSVMC 72 + IIL + P + + + P + + F +LAVI + + Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRV-----PKWLAVILLMGFIV 73 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + L + + E + + + + W + H + Sbjct: 74 LMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFA-----------------WILNKLHSFN 116 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++I + L + + ++ +I+ + F + S+ ++L L Sbjct: 117 IQISKDQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKL-HLA 175 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K+I R + V + + ++++ G+++G + GV + VI + Sbjct: 176 LDDPDMRLKQIDRFLQSVNQYMVIKT-LVSLATGIIVGVGLTIIGVDYAMLWAVIAFLFN 234 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G+ I+ + I+ A L ++ + P +G + L L Sbjct: 235 YIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPKFMGRGLGLSTLV 294 Query: 312 TFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 F L+ +G +G+ + P+ M + + Sbjct: 295 VFLSLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|326800764|ref|YP_004318583.1| hypothetical protein Sph21_3375 [Sphingobacterium sp. 21] gi|326551528|gb|ADZ79913.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 372 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 108/287 (37%), Gaps = 14/287 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + +++++++++ L L + + + + W+SD Sbjct: 61 RSVSSLLSSIALVILIGAVFTLLGTQLSSLANDWPAFKQQLLKSAADLQFWISD------ 114 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 T H+++ + +++ K+ S+ M L ++F + FF Sbjct: 115 -----TFHVNNKAQIDYINQAASKSLSTG--TTLLSKTLMSLSSLFLLLLFSFLYTFFIL 167 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 I + L + + +I + +I+ +G+ + + ++ A++ GV Sbjct: 168 FHRRLIVRFLVNSFKENHSPVVYEIVYQIQYIIKRYVVGLFLQMLIVTILACLAFYFIGV 227 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 LG+IT I +IP G + + N + + + + + Sbjct: 228 KYSFLLGLITGIFNIIPYVGIFTALVITVLITFATSTATNVLFVVIALVVIHAVDGNYIM 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P +VG +++ L GLV G G+ G+F+ ++A++ V++ Sbjct: 288 PKIVGSKVQINTLIALIGLVLGEMLWGITGMFLSIPIIAIMKVVFDR 334 >gi|323359451|ref|YP_004225847.1| permease [Microbacterium testaceum StLB037] gi|323275822|dbj|BAJ75967.1| predicted permease [Microbacterium testaceum StLB037] Length = 396 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 113/305 (37%), Gaps = 17/305 (5%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I + V ++ LK P+L A++I WP +S + +LA++ TV Sbjct: 44 LVIAAALGVVIWVVIQLKLLVIPLLVAILITALVWPAFSFLQRHRW--PKWLAIVVTVLG 101 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 I L++L + + +E S ++L D P + A ++ Sbjct: 102 TIAVISGLVWLAVWQI--SREFASVQERTVLAVEQFRQYLIDGPLHLSAQQIDDGLTQAG 159 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ +E + A G ++ + L DG I + Sbjct: 160 AFLQQQAE---------LLWTGALAIGTTLGHVGTGVLLTLFILLCLLADGGGIWRWTTR 210 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + R + ++S ++A + + +G +L GVP + +GV+ + Sbjct: 211 LFPRVARPAVDGAGRAGWRTVKSYARTQLLVATIDAIGIGLGAFLLGVPLSIPIGVLVFL 270 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP ++ A+++++ L+ A + + + L+P L+G +K+ Sbjct: 271 GAFIPFVGAVATGALAVFIALVYNGPLIALFMLIVVLGVQQVESHILQPILMGSAVKVHP 330 Query: 310 LPTFF 314 L Sbjct: 331 LAVVL 335 >gi|269118828|ref|YP_003307005.1| sporulation integral membrane protein YtvI [Sebaldella termitidis ATCC 33386] gi|268612706|gb|ACZ07074.1| sporulation integral membrane protein YtvI [Sebaldella termitidis ATCC 33386] Length = 383 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 120/341 (35%), Gaps = 8/341 (2%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +++F+++ + + F +P + A++ I SK + IA + V Sbjct: 18 RILLVFLLIFIAFKIAVFLSPFVLAVLFSMIVTKIAKFLNSKVKLPKKISTAIALMIVFA 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + +LE+ L + A + + + +++ + G + + + + Sbjct: 78 TVVGLISLIVTKLILEIYSLSFNISTYAQEIRLWIDNFMNFMNRGTIILDRIPEQILNQL 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + T+ I I F + + +IA F D +I ++ Sbjct: 138 KGSVSDIISMATSKISVILNNILSFITSLPNVVIYFFVTVIATVFMSLDKQNIILFVEKQ 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-----YWLAGVPSHVALGV 246 + + + V+ ++ L + V + + Sbjct: 198 LPASWLNKIYTLKNDLLSVVGGYLKAQAMLITICFFELLIGLNLFHFMGLNVQYPLTFAI 257 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P GA + LI + A L + I + V + L P L I Sbjct: 258 IICAIDALPILGAGAFMIPWIVVSLIVKDFKMAVALLILYVI-VTAVRQLLEPKLYSQNI 316 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L T + G++ G +G+ +GP ++ ++ ++ E + Sbjct: 317 GVHPLITLLSMYTGLKLAGFIGIIMGPAVVIILKNVFHEEL 357 >gi|226360347|ref|YP_002778125.1| hypothetical protein ROP_09330 [Rhodococcus opacus B4] gi|226238832|dbj|BAH49180.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 389 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 105/323 (32%), Gaps = 15/323 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A + T P+ + + +++ I L Sbjct: 60 AWLFSITIEPVVDWLERR-GLRRGLATGLVLLALFVFAIGFLALFGTLL----------A 108 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q +P LS + W++ ++ + + L L+ ++ F P Sbjct: 109 QQLAQLLKALPGALSSV--TDWSNRVFDTDFATGEDLIHLTPETVRDLAERFTPGVLGVL 166 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 L ++ +++ +F+ G ++ + + S + I + + Sbjct: 167 -SSLLGVVFQMLTLLLFVFYMSAQGPALRRTISSWFPARQQRVISVVWEISVEKAGGYVV 225 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 I+A + G + GVP + L + T I++ +P A+ + Sbjct: 226 SRLILAAISSVATGVFLVVIGVPYWLPLALWTGIVSQFVPTLGTYLAIALPAIIAAASQP 285 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + ++G + I + L P + + + F ++ G G +G + ++ Sbjct: 286 MDGVWVIVFGTVYQQIENYVLHPRITSATVSIHPAVAFGSVIVGASLFGPVGALVSVPVV 345 Query: 336 ALIAVIWKESIMAIKENKEKISS 358 A+I + + + ++ ++ Sbjct: 346 AVIEALVETYGRRYELVADQPAT 368 >gi|326941042|gb|AEA16938.1| hypothetical protein CT43_CH3271 [Bacillus thuringiensis serovar chinensis CT-43] Length = 220 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 76/199 (38%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + + + F + L+ + + LF+ +DG + + Sbjct: 10 TKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQRQPAAMR 69 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + I S G I+++ G++L Y + G+ V L ++ I+ ++P PI Sbjct: 70 ILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVPYVGPIIA 129 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + + K + P ++G + + + F ++ Sbjct: 130 ITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFIILTAGNL 189 Query: 323 MGLLGLFIGPVLMALIAVI 341 G++G+ + A++ V+ Sbjct: 190 FGIMGIILAIPGYAILKVL 208 >gi|291526970|emb|CBK92556.1| Predicted permease [Eubacterium rectale M104/1] Length = 388 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 107/339 (31%), Gaps = 17/339 (5%) Query: 31 FAPVLSALIIGFTSWPI---YSS---------FISKKEES---STFLAVIATVSVMCLFI 75 P++ +++ + P+ Y K + +I+ ++ + + Sbjct: 52 LMPIIMGIVLAYLINPMVEFYDRKLSNSLGKAIEKKCGKRPSMRGVSILISLAIIIAIIV 111 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V ++ + + + VS + Q + L+ A E+ T+ ++ S Sbjct: 112 VLIMMVVPQLVSNITNAVSLLPDQIQDLVKKITELAK--NNDRAKEIITELYNNGISYFT 169 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + F+ ++ ++ I I L + + + Sbjct: 170 EWVKDNMLGQVTFVINGIMGIFGTAVNCLVAFIVAIYVLLSKDTFKRQTKKLVSAFLPER 229 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 I + K+ G I ++ G + + +P + VI + +IP Sbjct: 230 HIQVLSSILKESDKIFGGFISGKIIDSLIIGAICFVCCLILRMPYVALISVIVGVTNVIP 289 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S L++ + L+ I + + P ++G L F Sbjct: 290 FFGPYIGAIPSTILIMLDSPSKGVIFLLFIIILQQVDGNIIGPKILGESTGLSPFWVVFA 349 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++GLFIG ++ + K + KE Sbjct: 350 IFLGNGLFGVVGLFIGVPTWGVVYYLIKRYVNYRVRKKE 388 >gi|291526473|emb|CBK92060.1| Predicted permease [Eubacterium rectale DSM 17629] Length = 388 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 107/339 (31%), Gaps = 17/339 (5%) Query: 31 FAPVLSALIIGFTSWPI---YSS---------FISKKEES---STFLAVIATVSVMCLFI 75 P++ +++ + P+ Y K + +I+ ++ + + Sbjct: 52 LMPIIMGIVLAYLINPMVEFYDRKLSNSLGKAIEKKCGKRPSMRGLSILISLAIIIAIIV 111 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V ++ + + + VS + Q + L+ A E+ T+ ++ S Sbjct: 112 VLIMMVVPQLVSNITNAVSLLPDQIQDLVKKITELAK--NNDRAKEIITELYNNGISYFT 169 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + F+ ++ ++ I I L + + + Sbjct: 170 EWVKDNMLGQVTFVINGIMGIFGTAVNCLVAFIVAIYVLLSKDTFKRQTKKLVSAFLPER 229 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 I + K+ G I ++ G + + +P + VI + +IP Sbjct: 230 HIQVLSSILKESDKIFGGFISGKIIDSLIIGAICFVCCLILRMPYVALISVIVGVTNVIP 289 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S L++ + L+ I + + P ++G L F Sbjct: 290 FFGPYIGAIPSTILIMLDSPSKGVIFLLFIIILQQVDGNIIGPKILGESTGLSPFWVVFA 349 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++GLFIG ++ + K + KE Sbjct: 350 IFLGNGLFGVVGLFIGVPTWGVVYYLIKRYVNYRVRKKE 388 >gi|300898822|ref|ZP_07117127.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300357548|gb|EFJ73418.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 376 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|170761594|ref|YP_001788976.1| sporulation integral membrane protein YtvI [Clostridium botulinum A3 str. Loch Maree] gi|169408583|gb|ACA56994.1| sporulation integral membrane protein YtvI [Clostridium botulinum A3 str. Loch Maree] Length = 351 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 114/333 (34%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ ++ FL + P + A + + I K + ++ + I T+ Sbjct: 11 LILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEGE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY----------CLSIIFMIIALFFFYR 179 P S+ E + + G I + + I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSVPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + +L + + + + I +++ L + +++ + Sbjct: 183 DITKHNNKLSKIIFNEHSSKFSHIYLESKRMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N L + + + + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLI-SYAAVSTIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|307247744|ref|ZP_07529782.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252335|ref|ZP_07534232.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855774|gb|EFM87939.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860257|gb|EFM92273.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 350 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 15/354 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESST 60 ++ +PQ + I+ I +YF P+L A++ + WPI K Sbjct: 7 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPR-- 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + V+ FI FLF + + + V+ + + WL +P Sbjct: 65 ---LLSLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPE 121 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S LK F ++ + S G+ + + ++ FF + Sbjct: 122 LIDYAMLDSLMNMLKEKILGFGESLLALSVNSIISLVGLGIYAFLVPLMV-----FFLLK 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + + I + G + + G+V + + Sbjct: 177 DKPLFVRGFIKFLPK-NRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAILLFFDLR 235 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + L V + +IP GA + V++ L G + L L I + + Sbjct: 236 YPLLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVV 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PFL + L L ++ G G+F L L+ + +E Sbjct: 296 PFLFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 349 >gi|300822720|ref|ZP_07102857.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331679542|ref|ZP_08380212.1| putative membrane protein [Escherichia coli H591] gi|300524720|gb|EFK45789.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331072714|gb|EGI44039.1| putative membrane protein [Escherichia coli H591] Length = 376 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 96 VVVMLITLTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|56421092|ref|YP_148410.1| hypothetical protein GK2557 [Geobacillus kaustophilus HTA426] gi|56380934|dbj|BAD76842.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 353 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 68/188 (36%) Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 F+ +++ + +F+ +D + + + + + + V + + G Sbjct: 159 KSFIGSAATLLIIPFIVFYMLKDIDVLKKAIWYMTPKRWRGPGMTFLKDVDESLGGYIRG 218 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 + GL WLAG+ + LG + + +IP P+ ++ L ++ Sbjct: 219 QLFVCAAIGLAAALGLWLAGMDYPLLLGFVIGVTYIIPYFGPLIGAVPAVILAATVSLKM 278 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + F+ L P +VG + + L L G G+LGL + A+ Sbjct: 279 VVIVLVIIFTLQFLEGNILSPLIVGKSVHMHPLVIMLALFAGGELAGVLGLILAVPTAAV 338 Query: 338 IAVIWKES 345 + V Sbjct: 339 LKVAIAHW 346 >gi|146292797|ref|YP_001183221.1| hypothetical protein Sputcn32_1697 [Shewanella putrefaciens CN-32] gi|145564487|gb|ABP75422.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] gi|319426101|gb|ADV54175.1| protein of unknown function UPF0118 [Shewanella putrefaciens 200] Length = 360 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 3/233 (1%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L T + I + + L + I + + +FFF +D + + Sbjct: 129 QLNVMVAELKKMLDTQHVLDIAKQIIGYSASLLVLMVYAILVPLLVFFFLKDKDQLIRGS 188 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +++ + + I + G I + G+ + G+ LGV+T Sbjct: 189 KRFFP-ANRQLARQVWFEMNQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYSALLGVLT 247 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIK 306 + +IP GA + +++ + + + G + +D L P L + Sbjct: 248 GLSVLIPYVGATLVTLPITLVAFFQWGFTSEFGYLMLGYGIIQALDGNLLVPILFSDAVD 307 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + ++ G+ G+F L +L+ + + SN Sbjct: 308 LHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIQEPVPAPSN 360 >gi|188589827|ref|YP_001920518.1| permease [Clostridium botulinum E3 str. Alaska E43] gi|188500108|gb|ACD53244.1| permease [Clostridium botulinum E3 str. Alaska E43] Length = 343 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 112/307 (36%), Gaps = 13/307 (4%) Query: 38 LIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 I+ + PI F SK + +V+ + ++ LFI + + + E+ + + Sbjct: 44 FILAYIIAPIRDLFQSKFKIKKKVASVLIILIILGLFISCITLVIPELVKEISN-IGVIF 102 Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + + + ++ + + L + L N + Sbjct: 103 DNIANFLEDMYIKFRVDSFPILKSIYNELMEKGNILFLNLSKSLFNNIV----------- 151 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + ++ +S + + +++F DG I +L + KKI + KV+ G Sbjct: 152 -LIVENIVSCAVIPVVVYYFLCDGDKIYNKLLFILPTEKREVTKKILNDIDKVLGRYITG 210 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 ++I G + + V + + ++ AI+ +IP PI ++ + + + Sbjct: 211 QVFLSIIIGFLTFILLIIFKVKFPIWISILNAILNIIPYFGPIFGGVPAVLVALLDSPIK 270 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A + + I I L P + + + L+ G + G +G+ + + + Sbjct: 271 ALWVTIGVFIIQQIEGNILSPKITADSTDMHPVMIIILLLIGDKFGGFIGMLLAVPVGVI 330 Query: 338 IAVIWKE 344 I V++ + Sbjct: 331 IKVLYDD 337 >gi|153001218|ref|YP_001366899.1| hypothetical protein Shew185_2702 [Shewanella baltica OS185] gi|151365836|gb|ABS08836.1| protein of unknown function UPF0118 [Shewanella baltica OS185] Length = 369 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 113/331 (34%), Gaps = 29/331 (8%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWP---IYSSFISKKEESSTFLAVIATVSVMC 72 + IIL + P + + + P + + F +LAVI + + Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRV-----PKWLAVILLMGFIV 73 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + L + + E + + + + W + H + Sbjct: 74 LMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFA-----------------WILNKLHSFN 116 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++I + L + + ++ +I+ + F + S+ ++L L Sbjct: 117 IQISKDQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKL-HLA 175 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K+I R + V + + ++++ G+++G + GV + VI + Sbjct: 176 LDDPDMRLKQIDRFLQSVNQYMVIKT-LVSLATGVIVGVGLTIIGVDYAMLWAVIAFLFN 234 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G+ I+ + I+ A L ++ + P +G + L L Sbjct: 235 YIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPRFMGRGLGLSTLV 294 Query: 312 TFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 F L+ +G +G+ + P+ M + + Sbjct: 295 VFLSLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|72162564|ref|YP_290221.1| hypothetical protein Tfu_2165 [Thermobifida fusca YX] gi|71916296|gb|AAZ56198.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 414 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 33/286 (11%), Positives = 88/286 (30%), Gaps = 13/286 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P + + ++ ++ L L + ++ VS + + Sbjct: 74 PAVNWLHRHRWPR-GLATGAVMLAAAGTLVLFLTVLGSMLVGQVVAFVSDLPRMTRS--- 129 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + W++ ++ L+ L + L N + G L Sbjct: 130 LLAWVNATFHTDFSPTTLLSELTSVSGLVEEYASQLAGNVVG--------AGSTVLALLF 181 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + + F+ DG + + S+ + I + ++A+ Sbjct: 182 DGLTIALFTFYLCADGPRFRRTICSVLPPRTQREVLRAWEIAIEKTGGYIYSRALLALIC 241 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + L +P AL + +++ IP A+ + + + + A + ++ Sbjct: 242 TVAHYILLALLDIPFAFALALWMGVLSQFIPTVGTYIGGALPVLVALLDGFWPALWVLVF 301 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + L+P + + + F ++ GV +G G + Sbjct: 302 VTVYQQFENYLLQPRITAKTLDMHPAVAFGSVLAGVAILGAPGALL 347 >gi|268316275|ref|YP_003289994.1| hypothetical protein Rmar_0708 [Rhodothermus marinus DSM 4252] gi|262333809|gb|ACY47606.1| protein of unknown function UPF0118 [Rhodothermus marinus DSM 4252] Length = 429 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 115/328 (35%), Gaps = 13/328 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A ++ + S P+ + A+ TV V+ LL L + ++ Sbjct: 94 LIPFVVAYLLAYLSNPLVDLLERRLHVPRWVSALTVTVLVVGALAAILLLLIPTIVGQLV 153 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELW----TKHLSHPQSLKILSETFLKTNGI 146 EL+ +++ + RWL + P E+ + + L + Sbjct: 154 ELIRQML---NSVGELRRWLYENPLLDRLEEVLPIDRQALIQQFTTFLQQQLNALTQSLP 210 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + A G L + + + +F+ +D + L L Sbjct: 211 DALATVAQSIGS-LLGALTVLAILPMLIFYTLKDYPKLRDALIGLFPKHNGRR--DYLMY 267 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV 265 V+ + G +I++ + A + VP + +G++ ++ +IP GA ++ Sbjct: 268 AGTVVGNYLRGQLLISLIAAFNVSVALLIFDVPFGLLIGLLAGLLNLIPNLGAVLTNIIA 327 Query: 266 SIYLLIKGN--IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + L+ G+ + +A + + + L P ++ + L + L + Sbjct: 328 LLIALLFGDPPLLDAVIVTGVLLGQGLLEASVLSPHILSHQVGLHPVLILLSLFVFGYFL 387 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKE 351 G GL I A++ ++ A ++ Sbjct: 388 GAFGLLIAVPTTAILVGFYQSYREAREK 415 >gi|188589789|ref|YP_001921436.1| hypothetical protein CLH_2055 [Clostridium botulinum E3 str. Alaska E43] gi|188500070|gb|ACD53206.1| putative membrane protein [Clostridium botulinum E3 str. Alaska E43] Length = 396 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 118/333 (35%), Gaps = 19/333 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVMCLFIVPLL 79 P+L A++I + +PI S + + + + + ++++ + + L Sbjct: 51 IKPLLIAILITYILFPITKSIENFLKNNKLYKIKNKGTCRALSIIFSYLAIIGIILGLLC 110 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ ++ + +S + + S + S+L L + + Sbjct: 111 GIYFMIGGQLSKNISISNIVEYISTYLNTHSFSSSSISLALSKLNLPFLDAMEDHIVEVV 170 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-- 196 F++ + I R AS F + + +I + +D + L +F Sbjct: 171 NFIQNYITNNIGRMAS-FAVSIGSGLATFFIALIISIYLLKDHEYFINLWNKLYYLIFRN 229 Query: 197 ---PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + +V G + A G++ A + G+ +G+I + + Sbjct: 230 SKVGKKINYVFSTIHEVFGRFIRGQLLEAFFVGVLSAIALSIVGIDYAFVIGIIVGLSNL 289 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPT 312 IP PI T ++ + + + I + +D L P +VG + L + T Sbjct: 290 IPYVGPIVGTILAAIMGLLSGTPIKIVYAIIAMIIVQQIDNNLLAPKIVGNSVGLHAVFT 349 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ G GL G+ + L A V++ Sbjct: 350 MLAILIGGNIGGLFGMLLAVPLAASFKVLFNNW 382 >gi|315654678|ref|ZP_07907584.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491142|gb|EFU80761.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 469 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 111/331 (33%), Gaps = 27/331 (8%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ L + G F P A + P I + A++ V + + V L Sbjct: 63 LIIFLLSLIAGVFMPTFLAFSLALAVRPASEWLIRHRWP-VGLAALVNIVLLFAILFVML 121 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + EL PR+ G L+ ++ + Sbjct: 122 GLIAIAITAMVTEL--------------PRY------GAKFQALYEHAINQLDRRGFDTS 161 Query: 139 TFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L K I+ I + S F ++ F+I+ F D + ++ L + Sbjct: 162 AVLDSWKNVDINRIFSYLSGFANQISGAGTTLFFIIMVAIFVVGDTVVVRRRAAELASYA 221 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + R +R+ FL T+ LV + GVP+ G++ + IP Sbjct: 222 PG--FAIALRNFSLRVRTYFLMTTVFGAVVALVDVGILYAFGVPTPWTWGILAFVANYIP 279 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G +S + L ++ A +F+ + + L+P + G + L +F Sbjct: 280 AVGFILSMIPPILLALALDGVWPAVGVFIGYMVASLLFLNILQPRIAGNAVGLNATVSFL 339 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ MG LG + L I+ +S Sbjct: 340 SLMVWSTVMGPLGAILAVPLTLFFKAIFVDS 370 >gi|251778739|ref|ZP_04821659.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083054|gb|EES48944.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 396 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 118/333 (35%), Gaps = 19/333 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVMCLFIVPLL 79 P+L A++I + +PI S + + + + + ++++ + + L Sbjct: 51 IKPLLIAILITYILFPITKSIENFLKNNKLYKIKNKGTCRALSIIFSYLAIIGIILGLLC 110 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ ++ + +S + + S + S+L L + + Sbjct: 111 GIYFMIGGQLSKNISISNIVEYISTYLNTHSFSSSSISLALSKLNLPFLDAMEDHIVEVV 170 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-- 196 F++ + I R AS F + + +I + +D + L +F Sbjct: 171 NFIQNYITNNIGRMAS-FAVSIGSGLATFFIALIISIYLLKDHEYFINLWNKLYYLIFRN 229 Query: 197 ---PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + +V G + A G++ A + G+ +G+I + + Sbjct: 230 SKVGKKINYVFSTIHEVFGRFIRGQLLEAFFVGVLSAIALSIVGIDYAFVIGIIVGLSNL 289 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPT 312 IP PI T ++ + + + I + +D L P +VG + L + T Sbjct: 290 IPYVGPIVGTILAAIMGLLSGTPIKIVYAIIAMIIVQQIDNNLLAPKIVGNSVGLHAVFT 349 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ G GL G+ + L A V++ Sbjct: 350 MLAILIGGNIGGLFGMLLAVPLAASFKVLFNNW 382 >gi|209524021|ref|ZP_03272573.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] gi|209495693|gb|EDZ95996.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] Length = 382 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 119/330 (36%), Gaps = 17/330 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++++ + P+ + S K ++ ++++ L + + ++ Sbjct: 40 IILIMISVVLAASIIPLVNWAQSLKIPR-WLAVIVVYLTLIGGITGLGLIIGPSVVDQIN 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPG---GMWASELWTKHLSHPQSLKILSETFLKTNGID 147 LV ++ + + + + ++ G L +++ + L++ G Sbjct: 99 LLVRQLPIFAERSLDLISNIASSLGEDIPDLIDRLVDTQSLTNWTIRSSQQLILRSYG-- 156 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + S+I + + D ++ + L + + ++ V Sbjct: 157 --------ITRGIVGGVFSLILSLFVSGYMVADSKTLVKSFVQLFPYPWNERLAAQAQPV 208 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPIS-FTAV 265 + + S G I++ G+ + + G+ + LG I +IP PI Sbjct: 209 GRRMGSYIRGRLIVSAILGVSITTCLGFLGLKDYALGLGAIAGFTNLIPFLGPILGAIPA 268 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L KG L L+ I + L P LVG + + L ++ GV+ +GL Sbjct: 269 LVVALAKGGFLFFWVLLLY-VIVQNLETYVLDPLLVGSSVGVHPLYQLLSVLAGVQLLGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G I P A IA + + + K E+ Sbjct: 328 IGALIVPPWFAGIAALVENLYLEPKRLAEQ 357 >gi|167766810|ref|ZP_02438863.1| hypothetical protein CLOSS21_01318 [Clostridium sp. SS2/1] gi|317498800|ref|ZP_07957088.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 5_1_63FAA] gi|167711564|gb|EDS22143.1| hypothetical protein CLOSS21_01318 [Clostridium sp. SS2/1] gi|291560611|emb|CBL39411.1| sporulation integral membrane protein YtvI [butyrate-producing bacterium SSC/2] gi|316893935|gb|EFV16129.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 5_1_63FAA] Length = 381 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 110/321 (34%), Gaps = 8/321 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKE 56 M+ + IM +++ + L F+ F P ++ II + P+ K + Sbjct: 1 MKRWEIYLDIIMELLVILAGALLLIFVLPKSIVFLWPFVAGWIISMMAHPVIEYLEKKVK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 F + I +V+ IV L F L++ + + Sbjct: 61 LPKKFGSAILIAAVITGIIVVLYFAVRGIALQVIGFIQDAPDIRHEIMRQGMIFQKKIEQ 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + Q + E F K ++ D+ A L ++ M+ A Sbjct: 121 FLSILPPSFGKQFDQWSGSIGELFKKAASSAGDYGVAHAGGVAKGVTSGLLGLVVMLFAA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + F + + + + V+ S L I I +L ++ Sbjct: 181 YMFSLEREKLIAWYEKCIPGFVKHKINVFMKNSVGVLVSYCLAQLKIMIVIIAILWIGFF 240 Query: 235 LAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +AG+ V+ I+ + P G +I+ LI G+I A L + AI L + Sbjct: 241 IAGIGHSFIYSVLVGIVDIFPILGTGTVIIPWAIFKLITGDIKTAVILLIIYAICLVLK- 299 Query: 294 KTLRPFLVGGPIKLPFLPTFF 314 + L+P ++G + + L T F Sbjct: 300 QVLQPKMMGDSMGISALTTIF 320 >gi|260892486|ref|YP_003238583.1| sporulation integral membrane protein YtvI [Ammonifex degensii KC4] gi|260864627|gb|ACX51733.1| sporulation integral membrane protein YtvI [Ammonifex degensii KC4] Length = 351 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 116/340 (34%), Gaps = 14/340 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ +L L +L P L ++ P+ + +A + Sbjct: 16 VAGAILIAAVLWLLRYLLPVLLPFLIGAVLALFLEPLVRPLERRLP--RGVAVFLAMLLF 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L Y +E+ +L + A + + +W + W E + Sbjct: 74 LLFLGLVFTLLGVYLAVELGDLAGSIPTYALEAQGKLFQWFN------WLRERYGALPPE 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ L + + A+ F + L + +A +F RD + + Sbjct: 128 AARYLEMTLNALAASAQKWAASLATSLISFFGAVPGFFLIVFVSFLATYFIGRDRYLLES 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + R + LV WL+GV + LG+ Sbjct: 188 WWQRLWPQPWGETSLNLLRRTSTAFWGYLKAQFFLVSLTALVTTIGLWLSGVKYALTLGL 247 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T ++ ++P G F Y G + L L FI+ + L +V + Sbjct: 248 LTGLLDLLPVLGPSTLFLPWIAYSFFTGCVPLGIKLSLVYG-ATFIIRQLLEARVVAFTL 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L FG+ G++ +G GL +GPV + +I +++ Sbjct: 307 GAHPLAVLFGMYAGLKLIGPGGLILGPVTVIVIQALYRAW 346 >gi|227500192|ref|ZP_03930261.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227217714|gb|EEI83018.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 402 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 111/346 (32%), Gaps = 12/346 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS------TFLAVIATVSVMC 72 +++ + ++ F + A ++ F I+ + ++C Sbjct: 34 LLVQVVGVMEPFIIGGMIAYVVSIPMNFFERKLEEYFPNEKYKKKFAGFSLGISCILIIC 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 I+ L L + + ++ + + +A + + S Sbjct: 94 ALILFLNILIPRIITVIFSFFNRWPEFIRETYDTLN--NHSLTRPYADKFYDYVNSFGWY 151 Query: 133 LKILSETFL----KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + KT+ F + G I+F I L + + ++ + Sbjct: 152 EVRNAVMNFISGKKTDLFSFTTGILNSVGSSIFTIFTIIVFSIFVLVYKNMLKTNGTRIM 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ Y K+ + + I + + ++ +P+ + + Sbjct: 212 YAILSEKKADYLNKVFSLSYNTFKDYIFSRLIAVVTLSGLTFLGMFIMKIPNAGIISLFV 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP PI+ +S ++ + A ++ I I + + P + G I LP Sbjct: 272 GVSDLIPIFGPITGAGLSAVIIFLESPIKALIFVIYDVIIQQIQENIIYPAIAGEKIGLP 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + + G G+ G+ IG + ++I ++ E I + K Sbjct: 332 AVWVLASITIGGSLFGIWGMLIGIPVASVIYTLFHEFIDNKLKEKN 377 >gi|148670304|gb|EDL02251.1| RIKEN cDNA D730040F13, isoform CRA_a [Mus musculus] Length = 789 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 559 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 618 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 619 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 678 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 679 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 735 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 736 GPILLCILVV 745 >gi|282901613|ref|ZP_06309531.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281193489|gb|EFA68468.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 360 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 132/369 (35%), Gaps = 24/369 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG---FFAPVLSALIIGFTSWPIYSSFISKKE- 56 M T P+ + + II+V+ + L +F P++S +++ + + I Sbjct: 1 MEMTNKLPRWLTFALAFPIIIVNGWLLIQVIKYFQPLVSVVVLAILLSFVLNYPIKFFHN 60 Query: 57 -ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 LA++ + + + + + + + + + + +P W+S Sbjct: 61 LGIPRILAIVGVLLLTVVMLGAIGVILLPLIFQQLNELINI---------LPAWISSGTQ 111 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMII 172 + A W I T L + I F + D + L++I I+ Sbjct: 112 QLQAFLDWAATQQDLPVNIIGIATQLLEKISNQIQSFTGKILTFAFDTIGFLLNLILTIV 171 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + +G + L K ++ + ++ F+G + G+ + Sbjct: 172 LTIYLILNGEKLWDGLYGWLPTYLGV---KARALLKEDFQNYFIGQATLGAVLGVTVTLT 228 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P + G+ ++ P G I VS+ L+ N + A + L I Sbjct: 229 FIALKIPLALLFGITIGFFSLFPFGTGIGIGIVSL-LIALENFWQAVEVALIAVTIDQIN 287 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL---IAVIWKESIMAI 349 + P L+G L + L+ G + G+LGL I + + A IW+E + Sbjct: 288 SNIVAPRLLGSLTGLNPVWVVISLLVGAKLGGVLGLLIAIPIASFIKDFADIWREGQLQT 347 Query: 350 KENKEKISS 358 + KI++ Sbjct: 348 DSMQGKITT 356 >gi|123228032|emb|CAM27763.1| likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Mus musculus] gi|123239759|emb|CAM24765.1| likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Mus musculus] Length = 876 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 646 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 705 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 706 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 765 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 766 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 822 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 823 GPILLCILVV 832 >gi|228907670|ref|ZP_04071527.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 200] gi|228852162|gb|EEM96959.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 200] Length = 337 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|134102038|ref|YP_001107699.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133914661|emb|CAM04774.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 385 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 18/312 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW----PIYSSFISKKEESSTFLAVIATV 68 R +++ + ++ + A V ++I P + K + A++ V Sbjct: 14 RVLVVAAAVGLAGYVLTYLAAVAMPVVIALLLAALLGPFSNWLTGKGAPRALATALVVCV 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + V L + + ++ L ++V + G WL P + +L Sbjct: 74 GLISVTGV-LALVVGTVVADLPRLQAQVSNTLESG---EAWLRLGPLRLDQRQLDELVND 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L+ + + A G + L ++ L FF DG I L Sbjct: 130 ATATLQTHQGGIISG-----VLSTAVTSGEVLGGALL----VLFTLIFFLYDGDRIWNFL 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + +A + + +G + L GVP AL + Sbjct: 181 LRGFPLGSRDRVDLAGRSGFDALTGYVRATAAVACMDAIGVGVSAALIGVPLAPALAALV 240 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + +++ + L+ + A + + + L+P L+G L Sbjct: 241 FLGAFVPYLGILITGTLAVLVCLVTVGFWPAVLMAAIVIVVTQLEGHVLQPLLLGRASHL 300 Query: 308 PFLPTFFGLVGG 319 L + G Sbjct: 301 HPLAVVLSISVG 312 >gi|330508909|ref|YP_004385337.1| hypothetical protein MCON_3237 [Methanosaeta concilii GP-6] gi|328929717|gb|AEB69519.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 356 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 104/298 (34%), Gaps = 19/298 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +IL+S YFL ++ ++ + P+ F +++ I +++ + I Sbjct: 20 LLLILLSSYFLWPLQDGIVLGIVFTYLGRPVRDLFGKRRQ--------IGSLAAIICIIA 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 PL +F G+ E + + Q ++S I + + ++ + + + + Sbjct: 72 PLSIIFAAGVFEAASQLRWLQSHRAQIVATGQEFISSIYIPQFIFDELSRGMDNLMGIGL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T L G L+++ ++ DG + Sbjct: 132 SMLTSLP----------VFDLGTTLTLGLLNLLIAFCVCYYLLVDGDRLLGATIDFLRQK 181 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + G A+ + ++L +P +A+ I + ++P Sbjct: 182 KGDFELRCLGRIDGILSGIYTGSISTAMVYAIASVPIFYLFDIPRPLAMASIILLAGVVP 241 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + F ++ I+ A F ++ + V+ +RP++V + + Sbjct: 242 FLTWLVFLLTAVSRYIEMGPMEAAVFFFAASVLVAAVELVVRPYIVYARSSIHPMLVL 299 >gi|206970693|ref|ZP_03231645.1| membrane protein [Bacillus cereus AH1134] gi|206734329|gb|EDZ51499.1| membrane protein [Bacillus cereus AH1134] Length = 340 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 117/338 (34%), Gaps = 19/338 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILTLVLYGLKSMINLILITFILTFLMNRFQRFISKKLKMNRKVVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + L +++ +L+ + L QH P + I + E+ Sbjct: 69 YIILVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQH-PPDNEMIRYILSAINEMEVSKYI 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + + S F ++ + +S Sbjct: 128 EQGVDVIYQSIANIGKVSLQIILSLILSLFFLLEKERIISFT-------------SKFKD 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ +R KVI + F +IA+ G++ A + G P + L V Sbjct: 175 SKLKIFYEEIAYFGERFARSFGKVIEAQF----LIAVVNGVLTVIALVILGFPQLLVLTV 230 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP G IS + I G + + ++ + + L P + Sbjct: 231 MVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMSAKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 291 NLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|332171526|gb|AEE20781.1| protein of unknown function UPF0118 [Krokinobacter diaphorus 4H-3-7-5] Length = 379 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 120/335 (35%), Gaps = 18/335 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y ++ + A ++ PI + S T+ +V+ + ++ + + L Sbjct: 45 YTIQSVIVYLAVAAVLSLVGRPIVKFLRYSLKFSPTWASVVTILLLIMIIMGVLALFIPV 104 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + + L + + V ++ + G A+ ++ Q ++ F+K Sbjct: 105 VIDQSQHL------SQINFDDVKVNINRL-YGEIAAYFGINKMTIIQGVQQ--ADFVKNF 155 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 IP F + + I +I FFF +D + L + ++ Sbjct: 156 DFGIIPTFLNSILGNLGAAGIGIFAIIFITFFFLKDNRLLINSLLVFARRGNEGKFLRVF 215 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + ++ F+G+ I ++ G+ + +A+ + A++ ++P P+ Sbjct: 216 EKIKYLLSRYFIGLIIQVFTMFVLYAIILLSFGIDNALAIALFCAVLNLVPYIGPLVGGG 275 Query: 265 VSIYLLIKGN--------IFNATCLFLWGAIELFIVDKT-LRPFLVGGPIKLPFLPTFFG 315 V + L+ N I +VD ++PF+ G +K L F Sbjct: 276 VMLLLVTSSNINMDFRTVILPKLFWIFICYGAAQMVDNFIIQPFVFGNSVKSHPLEIFLA 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G+ G+ + + + VI KE + K Sbjct: 336 IIIAGLLFGVFGMILAVPVYTALKVISKEFLSEYK 370 >gi|302384825|ref|YP_003820647.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] gi|302195453|gb|ADL03024.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] Length = 367 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 130/362 (35%), Gaps = 17/362 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLA 63 + ++ + + S +L P L A + + P K + Sbjct: 9 KKTLLILGVTGAVYFSFRYLLPLVIPFLIAYVFALSLRPSALWIERKTRFAIKGREISVP 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + + + Y +++ + L Q+ + + + Sbjct: 69 LAMIGGIEIILFMIVFGIILYVG--GRKIFMEARLLLQNLPVILGEIDRWLMDNCSFAER 126 Query: 124 TKHLSHPQSLKILS------ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L ++++ + +K + F+ + + + +I ++IA Sbjct: 127 FLKLPDGYMVEVVRDIISGGQVAIKGRIMPFLMVNSMTIMKWMVQATVILIILLIATVLS 186 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ I ++ D+ +F + + R + V + I + +V +L G Sbjct: 187 LQEMDEIRERRDN---SIFCFEYAMLGRRLTTVGSAWLKTQGAIMLFTMVVCSIGLFLLG 243 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P + G+ ++ +P G F +++ +I N T L L I F+ + + Sbjct: 244 NPYFILFGIGIGLLDALPIFGTGTVFIPWALFSMINKNWKYGTGLILIYVICYFLRE-IM 302 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++GG + L L T + G++ GLLG +GP+ + ++ I + ++ + +K Sbjct: 303 EAKIMGGKVGLTPLETLASMYVGLQLFGLLGFILGPIGLLIVEDIVEVYEVSYCHDGKKG 362 Query: 357 SS 358 + Sbjct: 363 AD 364 >gi|307728543|ref|YP_003905767.1| hypothetical protein BC1003_0473 [Burkholderia sp. CCGE1003] gi|307583078|gb|ADN56476.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 358 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 130/343 (37%), Gaps = 9/343 (2%) Query: 5 MLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + W+ + + + + L+ L P L I+ + P + + ++ + Sbjct: 9 TPVQRRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRVPRALAAL 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + + ++ L +F E +L +V L H + + G + + Sbjct: 69 LMMLLFTLLMTLL-ALLVFAVIQKEGPQLRQQVPLLFTHVNAWLQPKLALLGLADSLDFA 127 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L+ ++T + + + + ++I + + LF+ D Sbjct: 128 SVRDLVMGQLEGSAQTVARYAWTSIVTSS-----NVMMAVVGNLIMVPLVLFYLLYDWNR 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ S+ + +++R + +++ G ++ + +A +AG + Sbjct: 183 MLLRVQSVVPRRWLDKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAAALSIAGFEIALP 242 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G+ T + IP G A A+ LL GN + + L + + L P LV Sbjct: 243 VGIFTGLAVFIPYVGFATGLALALLAALLQFGNWYGFGAVALIYGVGQIVESFFLTPRLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G I L L F L+ + G G+ + + A+++V +E Sbjct: 303 GERIGLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAVRE 345 >gi|312870325|ref|ZP_07730452.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094146|gb|EFQ52463.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 369 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 137/377 (36%), Gaps = 39/377 (10%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSS----- 50 +N Q + + +F++ +++ F F P+L +I + + Sbjct: 5 VNRQHVSLALALFVLYLAIVFWPHFAKWCTTIFAAMTPLLIGAVIAYIVNLLLRKYEQLY 64 Query: 51 -----------FISKKEESSTFLAVIATVSVMCLFIVP-LLFLFYYGMLEMKELVSKVVL 98 F ++L++ ++++ ++P L+ + +++++ + Sbjct: 65 RRLFKGPRAKKFQRLWGIFLSYLSIFLILAIVIRLVIPELISCVQLLINNHSKVITRFIT 124 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 A +H + +HLS ++ K+LS F T + + AS Sbjct: 125 AFEHNSNLQEVFKQFDV---------RHLSWSKAEKVLSYGFSGT--VKALMSTASSVVS 173 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + ++ F I L + ++ +D+ + + R + G Sbjct: 174 VATTSIVAFFFSIYLLIYKEMLARQCTRLIDAYLGKIKRPLM-YVIRTFDNCYSNYIAGQ 232 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 A G+ + +P +GV+TAI A+IP I ++ + L+ + A Sbjct: 233 CKDAAILGIACFIGMSILRMPYATMIGVVTAIGALIPIIGAILGASIGVVLIFAVSPLKA 292 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + + ++ P +VG I LP + F ++ G G+LG+ + L A + Sbjct: 293 GIFLIFIIVLQQLDNRITYPLVVGKSIGLPSVWVFAAVIIGGSISGILGMMLTVPLFAAL 352 Query: 339 AVIWKESIMAIKENKEK 355 I + + ++ Sbjct: 353 YQIIATDVGKRERPGQE 369 >gi|227883620|ref|ZP_04001425.1| membrane protein [Escherichia coli 83972] gi|300985174|ref|ZP_07177311.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300987373|ref|ZP_07178181.1| hypothetical protein HMPREF9553_03226 [Escherichia coli MS 200-1] gi|301050301|ref|ZP_07197190.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|227839499|gb|EEJ49965.1| membrane protein [Escherichia coli 83972] gi|300297930|gb|EFJ54315.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300306241|gb|EFJ60761.1| hypothetical protein HMPREF9553_03226 [Escherichia coli MS 200-1] gi|300408203|gb|EFJ91741.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291775|gb|EFU51131.1| conserved hypothetical protein [Escherichia coli MS 153-1] gi|315295956|gb|EFU55265.1| conserved hypothetical protein [Escherichia coli MS 16-3] Length = 376 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPRFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|146277003|ref|YP_001167162.1| hypothetical protein Rsph17025_0956 [Rhodobacter sphaeroides ATCC 17025] gi|145555244|gb|ABP69857.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 349 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 3/249 (1%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++ + S + A +P + + S SL Sbjct: 57 AIALFILLVTAGLIGSFLAFAPAMLEQADELARQLPPALESLRDRISSFSWGPSLLGRLA 116 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G FAS + + ++ + D + L +L Sbjct: 117 PSRLMSGE---GGFASTAVSATFGAIGNFVIILFVGLYAAIDPGLYRRGLRALLSPELRP 173 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ + +R+ G I GL WL G+P LG+I AI+ IP Sbjct: 174 RGEEVMDVAGHTLRNWLGGQLISMSFVGLFTWLGLWLIGIPLAFILGLIAAILTFIPNIG 233 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ ++ L + + + + P + + LP + Sbjct: 234 PVLSAVPALLLAMPEGWSQVGLVLAVFLTVQAVESYVVTPIIQKERVSLPPALIISAQLL 293 Query: 319 GVRTMGLLG 327 GL+G Sbjct: 294 MGVLFGLMG 302 >gi|194225616|ref|XP_001916341.1| PREDICTED: similar to likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Equus caballus] Length = 877 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 647 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 706 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 707 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAIPAVLDLWL 766 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 767 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 823 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 824 GPILLCILVV 833 >gi|331649281|ref|ZP_08350367.1| putative membrane protein [Escherichia coli M605] gi|331041779|gb|EGI13923.1| putative membrane protein [Escherichia coli M605] Length = 376 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 118/333 (35%), Gaps = 26/333 (7%) Query: 3 ETMLNPQGIMRWMI----MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 ET + MR ++ + +IL ++ +L AL P+ + FI + + Sbjct: 29 ETPQPDKTGMRILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQR 88 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 +A V+ + ++ L L E +S + N+ Sbjct: 89 P-----VAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT-------------- 129 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + +L + E L+ + + F + S++ +++ + F Sbjct: 130 RKLFKLQEMLPFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFML 189 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + ++ + + + R + V L + ++ G+++ L GV Sbjct: 190 FEVRHVPYKMR-FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGV 247 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + V+ ++ +P GA IS I +L+ I+ + + ++ L Sbjct: 248 QFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILE 307 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P ++G + + + F L+ +G +G+ + Sbjct: 308 PRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLL 340 >gi|154495831|ref|ZP_02034527.1| hypothetical protein BACCAP_00111 [Bacteroides capillosus ATCC 29799] gi|150275029|gb|EDN02077.1| hypothetical protein BACCAP_00111 [Bacteroides capillosus ATCC 29799] Length = 377 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 104/337 (30%), Gaps = 13/337 (3%) Query: 24 LYFLKGFFAPVLSALIIGF-------TSWPIYSSFISK---KEESSTFLAVIATVSVMCL 73 + + G F P+ I F +Y + + K S + + + L Sbjct: 33 FWTVIGLFQPLFIGFAIAFVLNRSCQLFSQLYDRGLGRTKAKNLSRPLAVATSYLLMFVL 92 Query: 74 FIVPLLFLFYYGMLEMKELVSKVV---LANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 I + + ++ ++ + L Q + WL+ + + +L + S Sbjct: 93 IIAFFSLVLPKLVESIQIFLNSINGYMLNIQIWLNKQEWLAPLFSSLHLDKLDLSNFSDL 152 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + T + + S I + LSIIF + L + L + Sbjct: 153 IKGALNGVVNTLTTAVPQLLTITSNIISIVVTGFLSIIFSVYMLSGKATLLSQCRRVLKA 212 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 A+ + + + G I A G + +GVI Sbjct: 213 YAPPKVEAWVTDVVHLTANTFTAFVSGQLIEACILGGLTALGMLFIQADYAPLIGVIVGA 272 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+IP AV+ LLI + ++ + P +VG + LP + Sbjct: 273 TALIPMVGAFLGGAVAAVLLIMVSPLKTLIFLIFLLCLQQFEGNVIYPRVVGNNVGLPAI 332 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + G +G+ + + +++ + + + Sbjct: 333 WVLAAVTVGGGLFQFVGILVSVPVASVLYTLLRRDVH 369 >gi|114566019|ref|YP_753173.1| hypothetical protein Swol_0467 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336954|gb|ABI67802.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 339 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 112/315 (35%), Gaps = 14/315 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + L+ ++ ++ + + SF+ +K + ++ + ++ + Sbjct: 15 IVVVLATIYFLFLVREVLLTFFLGAVLAYLLFRP-ISFLERKGLKRVWAILLLYLLLLTV 73 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + ++E+ ++ + + + + + G L L Sbjct: 74 FSLFFSLAVPAMVVELNQMAGILPDYADQARNMAKSIDGMELGKLTPVLKENLNQIENKL 133 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + FL FL L++ F I F+ D I L Sbjct: 134 FEGLKNFLGG-------------FYSFLGKFLALAFSPILAFYIINDWEKIRDSFLGLFS 180 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 F K + + + + G IIA G+ G+A L GV + +G++ + + Sbjct: 181 PSFRREIKAVLDKIDEALIEFLKGHLIIATFVGIFTGTAAALLGVKFPLLIGLVAGVADL 240 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P +I + + ++ + + L I + + P ++GG + + L Sbjct: 241 VPYFGAFLGGFFAILIALSESLQLSLYMGLAVVIIQQVESNIITPRIMGGKLGMHPLLIV 300 Query: 314 FGLVGGVRTMGLLGL 328 F L+ G + MG+ G+ Sbjct: 301 FALLAGGKLMGIWGM 315 >gi|115523770|ref|YP_780681.1| hypothetical protein RPE_1753 [Rhodopseudomonas palustris BisA53] gi|115517717|gb|ABJ05701.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisA53] Length = 412 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 121/333 (36%), Gaps = 16/333 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +++ +I+ +LY K FF P+++A ++G P ++ VS Sbjct: 78 VLLALLIIVIVAALYVAKPFFLPIVTAFVVGTMLSPAAGFLEQRRIPRG--------VSA 129 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + L +V + G+ + L G + + L +P Sbjct: 130 VLIVGIGFGVVTFIVTLIAAPVVEWSGRLPELGVKLKEKLQAFDGTIVLWQQLQAALGNP 189 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 F + F S L + ++++ I + ++D + + Sbjct: 190 DHAVATPIQFPTIEWMQPTYEFLSPTLTEMLLFLVTLVLFIAS----WKDLRR--ALVMT 243 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +I + + S L +T I +G G V G WLAG+P+ ALG + A Sbjct: 244 SPNRDTRLRALRILNEIEGSLGSYLLTVTSINLGYGAVTGLICWLAGMPNPAALGALAAT 303 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLP 308 + P P + + I L L A+ F+ + P ++G + L Sbjct: 304 LNFFPVIGPFVMLIILTLVGIVSFPTLGAGLLAPLGFALLTFVEGHFITPAIIGRRLSLN 363 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F L G +G F+ L+ + V+ Sbjct: 364 ILAVFITLAFWTWLWGPMGGFLASPLLIVALVL 396 >gi|327481481|gb|AEA84791.1| PerM family membrane protein [Pseudomonas stutzeri DSM 4166] Length = 358 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 118/350 (33%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++F+ + L APVL+ L++ F + + ++ Sbjct: 9 MQRYFSDEEAVVLAVLLFLAFAIVLTLGKMLAPVLAGLVLAFLMQGLVGAMERRRVPHLL 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ + V L + L + + L N+ + W S + Sbjct: 69 AVWLVFLMFVGVLVVCTLFIVPLL-------WQQVLTLFNELPRMLVEWQSLLLLLPERY 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + + + + + ++ + I +FFF +D Sbjct: 122 PQLVTEEQVLRGIDFMRGEIGRY--GQLVLTSSLSSLPLLIGLMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 IS + ++S+ + I + G I + +V + + G+ Sbjct: 180 REQISNWIKGYLPRERGL-ITQVSQEMNLQIANYIRGKAIEILICAVVSYAVFAALGLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRP 298 + ++ + ++P GA + +++ + + + + L + AI + L P Sbjct: 239 AALMAMLVGVSVVVPYIGATVVTIPIALIGIFQWGLGDQFFYLMVAYAIIQTLDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLYAWPRE 348 >gi|314923826|gb|EFS87657.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966159|gb|EFT10258.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314982024|gb|EFT26117.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090838|gb|EFT62814.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315095050|gb|EFT67026.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|315104283|gb|EFT76259.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] gi|327328171|gb|EGE69940.1| hypothetical protein HMPREF9341_01223 [Propionibacterium acnes HL103PA1] Length = 404 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKK 55 E + G+ + I+ + + + + F AP+ L + T++PI++ + K Sbjct: 49 EVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHK 108 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A A +V+ + ++ + + + +L S IP Sbjct: 109 CPR-WISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSY-----------------IPQ 150 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + LK + + II ++ + Sbjct: 151 MEKIYTQLLHWSTQLGYSQEVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMI 210 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L G IR +L T+ + L +A + Sbjct: 211 FMVMDTPQMHDRLRMAGSR--KPVVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLI 268 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + + + IP G I ++ L K A + + ++ F++ Sbjct: 269 IGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVVVVVSYSVLNFVIQS 328 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++P G + L +F L+ G LG I Sbjct: 329 IIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLI 364 >gi|153956495|ref|YP_001397260.1| hypothetical protein CKL_3913 [Clostridium kluyveri DSM 555] gi|219856798|ref|YP_002473920.1| hypothetical protein CKR_3455 [Clostridium kluyveri NBRC 12016] gi|146349353|gb|EDK35889.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219570522|dbj|BAH08506.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 351 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 116/335 (34%), Gaps = 6/335 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M + + I + I++ IL +F + P + A + K + S Sbjct: 1 MNDLINKIDKISIFFIVYTILFLTFFNTLDYTLPFVLAFLCALLLRKPTIFISKKLKIKS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL--VSKVVLANQHGIPVPRWLSDIPGGM 117 ++I T+ + I L+ E +L ++ ++ + Sbjct: 61 GIASLITTLVFFTIIITLLVLGITTISQEAIQLGKNTQAYISKNSTDIYNSFYKLQKYYN 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L + + + + + + + ++F ++ +FF Sbjct: 121 DLDPYIINTLEKNFTNFVTKTSNIVVGFSGKLVSYIINLIATIPYILMVVLFTLLTTYFF 180 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D S + +L + KI K++ + L II + L + + Sbjct: 181 TKDMSSSKINMQNLIPNNKTDKLLKIYSETKKMLGNYLLSYMIIILFTFLETIIVFLIFK 240 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V V L VI AI ++P G + ++ IYL++ N L + I + I+ + Sbjct: 241 VKYAVILSVICAIADLLPILGIGAIYIPIAFIYLIVFKNYVTFIGLLI-CYILVSIIRQI 299 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + P +V + + + L G+++ G+ G+ Sbjct: 300 IEPKIVSSSLGIHPVAVLAALFIGLKSNGISGMIF 334 >gi|30020062|ref|NP_831693.1| hypothetical protein BC1923 [Bacillus cereus ATCC 14579] gi|228952327|ref|ZP_04114415.1| UPF0118 membrane protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958236|ref|ZP_04119965.1| UPF0118 membrane protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|229069498|ref|ZP_04202787.1| UPF0118 membrane protein [Bacillus cereus F65185] gi|229079130|ref|ZP_04211679.1| UPF0118 membrane protein [Bacillus cereus Rock4-2] gi|229127355|ref|ZP_04256351.1| UPF0118 membrane protein [Bacillus cereus BDRD-Cer4] gi|229144565|ref|ZP_04272968.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST24] gi|229150183|ref|ZP_04278405.1| UPF0118 membrane protein [Bacillus cereus m1550] gi|229178354|ref|ZP_04305723.1| UPF0118 membrane protein [Bacillus cereus 172560W] gi|296502546|ref|YP_003664246.1| hypothetical protein BMB171_C1711 [Bacillus thuringiensis BMB171] gi|29895612|gb|AAP08894.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|228605084|gb|EEK62536.1| UPF0118 membrane protein [Bacillus cereus 172560W] gi|228633302|gb|EEK89909.1| UPF0118 membrane protein [Bacillus cereus m1550] gi|228638978|gb|EEK95405.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST24] gi|228656188|gb|EEL12030.1| UPF0118 membrane protein [Bacillus cereus BDRD-Cer4] gi|228704147|gb|EEL56584.1| UPF0118 membrane protein [Bacillus cereus Rock4-2] gi|228713637|gb|EEL65523.1| UPF0118 membrane protein [Bacillus cereus F65185] gi|228801445|gb|EEM48333.1| UPF0118 membrane protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807323|gb|EEM53854.1| UPF0118 membrane protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296323598|gb|ADH06526.1| hypothetical protein BMB171_C1711 [Bacillus thuringiensis BMB171] Length = 337 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|75759897|ref|ZP_00739969.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228939085|ref|ZP_04101681.1| UPF0118 membrane protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228969054|ref|ZP_04129975.1| UPF0118 membrane protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228971962|ref|ZP_04132581.1| UPF0118 membrane protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978574|ref|ZP_04138948.1| UPF0118 membrane protein [Bacillus thuringiensis Bt407] gi|74492599|gb|EAO55743.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228781124|gb|EEM29328.1| UPF0118 membrane protein [Bacillus thuringiensis Bt407] gi|228787733|gb|EEM35693.1| UPF0118 membrane protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228790658|gb|EEM38338.1| UPF0118 membrane protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228820564|gb|EEM66593.1| UPF0118 membrane protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 337 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYVLST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|126174889|ref|YP_001051038.1| hypothetical protein Sbal_2681 [Shewanella baltica OS155] gi|217972862|ref|YP_002357613.1| hypothetical protein Sbal223_1685 [Shewanella baltica OS223] gi|125998094|gb|ABN62169.1| protein of unknown function UPF0118 [Shewanella baltica OS155] gi|217497997|gb|ACK46190.1| protein of unknown function UPF0118 [Shewanella baltica OS223] Length = 369 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 111/328 (33%), Gaps = 23/328 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + IIL + P + + + P + +LAVI + + L Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRV--PKWLAVILLMGFIVLMG 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + + E + + + + W + H +++I Sbjct: 77 LWLASVVGSSVNEFSKQLPQYRVQLVEQFA-----------------WILNKLHSFNIQI 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L + + ++ +I+ + F + S+ ++L L Sbjct: 120 SKDQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKL-HLALDD 178 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+I R + V + + ++++ G+++G + GV + VI + IP Sbjct: 179 PDMRLKQIDRFLQSVNQYMVIKT-LVSLATGVIVGVGLTIIGVDYAMLWAVIAFLFNYIP 237 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A L ++ + P +G + L L F Sbjct: 238 NIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPKFMGRGLGLSTLVVFL 297 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ M + + Sbjct: 298 SLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|328466968|gb|EGF38071.1| hypothetical protein LM1816_13087 [Listeria monocytogenes 1816] Length = 347 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 119/345 (34%), Gaps = 26/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ ++ + L++ + FL + ++ +LV +V + P + G Sbjct: 65 VIVLSLVAVFLYVAIVHFL-PILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 122 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 162 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 163 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 222 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 223 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 282 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 283 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 327 >gi|168182643|ref|ZP_02617307.1| putative membrane protein [Clostridium botulinum Bf] gi|237796003|ref|YP_002863555.1| hypothetical protein CLJ_B2795 [Clostridium botulinum Ba4 str. 657] gi|182674151|gb|EDT86112.1| putative membrane protein [Clostridium botulinum Bf] gi|229262524|gb|ACQ53557.1| putative membrane protein [Clostridium botulinum Ba4 str. 657] Length = 342 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 121/319 (37%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + L + +I + PI++ F+ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFLISFVIYYILKPIHT-FLKHKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + + V + ++ I + + + + + G Sbjct: 90 IKEGYNITNSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKVNGKIQNYTVSIG 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F FG LDY + + I +++F G I Q+ + K + Sbjct: 143 ENILNKFVG-FGENILDYAV----IPIIVYYFLAAGDKIIQKFFMIFPVKIRGVAKNVFE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIMSQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A F+ I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWAFILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMVLAIPIGVIMKIIYED 336 >gi|119488061|ref|ZP_01621505.1| hypothetical protein L8106_11707 [Lyngbya sp. PCC 8106] gi|119455350|gb|EAW36489.1| hypothetical protein L8106_11707 [Lyngbya sp. PCC 8106] Length = 316 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 4/190 (2%) Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 F LS+IF+++ + DG I + + S V K F Sbjct: 118 FVQGAFSNFLSLIFIVVICVYMLIDGIKIWSACLKIVPIEIR---DRFSLTVQKSFIGFF 174 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGN 274 ++ + + A+ + GV + L +I ++ +IPG G + VS+ + + Sbjct: 175 RAQFLLVLFLSISGFIAFKILGVQYALFLSIILGLIDVIPGVGGTLCVIIVSLLVFLSEG 234 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + A + + I I D + P L+ + + + FF L G + G+LG+F+ + Sbjct: 235 GWMAIKVLIAATIVQQIQDNLISPKLMKDNLNINPVFLFFALFVGEKIAGILGIFLSIPI 294 Query: 335 MALIAVIWKE 344 ++ + + E Sbjct: 295 AGMLIIWFSE 304 >gi|300815320|ref|ZP_07095545.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300907375|ref|ZP_07125023.1| hypothetical protein HMPREF9536_05315 [Escherichia coli MS 84-1] gi|301305987|ref|ZP_07212068.1| hypothetical protein HMPREF9347_04606 [Escherichia coli MS 124-1] gi|300400884|gb|EFJ84422.1| hypothetical protein HMPREF9536_05315 [Escherichia coli MS 84-1] gi|300532212|gb|EFK53274.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300838770|gb|EFK66530.1| hypothetical protein HMPREF9347_04606 [Escherichia coli MS 124-1] gi|315256072|gb|EFU36040.1| permease, PerM family [Escherichia coli MS 85-1] Length = 376 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + IA V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----IAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|296112696|ref|YP_003626634.1| hypothetical protein MCR_0469 [Moraxella catarrhalis RH4] gi|295920390|gb|ADG60741.1| conserved hypothetical protein [Moraxella catarrhalis RH4] gi|326560951|gb|EGE11316.1| hypothetical protein E9G_03819 [Moraxella catarrhalis 7169] gi|326563813|gb|EGE14064.1| hypothetical protein E9M_02703 [Moraxella catarrhalis 46P47B1] gi|326566826|gb|EGE16965.1| hypothetical protein E9K_00888 [Moraxella catarrhalis 103P14B1] gi|326567334|gb|EGE17449.1| hypothetical protein E9Q_05493 [Moraxella catarrhalis BC1] gi|326569849|gb|EGE19899.1| hypothetical protein E9U_06036 [Moraxella catarrhalis BC8] gi|326571545|gb|EGE21560.1| hypothetical protein E9S_02959 [Moraxella catarrhalis BC7] gi|326576739|gb|EGE26646.1| hypothetical protein E9Y_02005 [Moraxella catarrhalis 101P30B1] gi|326577585|gb|EGE27462.1| hypothetical protein EA1_02327 [Moraxella catarrhalis O35E] Length = 415 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 127/343 (37%), Gaps = 9/343 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI--YSSFISKKEESSTF 61 T I + + ++L+S Y+L + V +++++ + Y + I + Sbjct: 3 TQEQKSFIFMTVAVVLMLLSFYYLIHVWLIVFASILMAVWLLSLVEYLTLIPWVGQYLKK 62 Query: 62 LA--VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 L ++ T+ +M L V +G +L + +L Q + ++L+ A Sbjct: 63 LPHGILLTMVLMGLVGVLSTLAALFGHELALQLENLKLLVPQAFEYMNQYLTQYLQTHPA 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L + L+ + FL + + G + ++ II LF Sbjct: 123 VYEWLAGLEWARELRDNPQQFLTRFSDGAMAYLPTYLGGMVSGMGTLVVITIIGLF-LAI 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + ++ + + + ++ LG ++ G+ G A WL G+P Sbjct: 182 SPSVYRRSFVAMVPKDSRDKAEYLLDRSYRSMQQWLLGQLVVMAFVGIATGIALWLMGIP 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLR 297 +ALG I ++ +P P + + LL+ + L++ I + + + Sbjct: 242 FALALGFIAFLLDFVPVLGP--WLSAIPILLLTLIVSPKMLLWVALMIVVVQQLESYVIS 299 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 P + + LP + V G+LG+ + LM ++ V Sbjct: 300 PIVQNRMVDLPPVALLLSQVIMGSITGILGIALATPLMVMVIV 342 >gi|110639081|ref|YP_679290.1| transport protein [Cytophaga hutchinsonii ATCC 33406] gi|110281762|gb|ABG59948.1| transport protein [Cytophaga hutchinsonii ATCC 33406] Length = 371 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 99/316 (31%), Gaps = 16/316 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K F PV A ++ P+ ++I ++ + + I + + + Sbjct: 27 KAFLVPVFFAGLLSLLLLPVSKKIQKFIPN--EVCSIILSLVLFLIIICSVSYFISTQVS 84 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + + + + +E ++ L +G Sbjct: 85 NIISDYDMIESKIKTKAHALQ--------ATVNEYTGMDEKEQEAWFDKESEQLLKSGFQ 136 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 G L MI F G I + SL + I V Sbjct: 137 KGTTLLVGVGNFVFGLTL---VMIYTFFLQLYRG-KIKLFILSLIDEQQHEKALSILNKV 192 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAV 265 ++ G+ I G++ L G+ + LG++ + +IP + Sbjct: 193 QSLVMHYITGLCIALSIIGVMNAVGLTLLGIEHGIFLGLLAGFLNIIPYIGSFVGAGLPM 252 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ K +++ + FI + P +VGG ++L L T F ++ G G+ Sbjct: 253 IMALIYKDSLWYPVGVLAIFMFNQFIDNNITTPNVVGGYVRLNSLATIFIVIIGGMIWGV 312 Query: 326 LGLFIGPVLMALIAVI 341 G+ + L+ + + Sbjct: 313 AGMVLFIPLLGIFKIF 328 >gi|300769592|ref|ZP_07079478.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493007|gb|EFK28189.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 358 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 114/333 (34%), Gaps = 17/333 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 39 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A +++ P + W H L + L T GI Sbjct: 99 DQLKVIPDMLAKA----------ITNHPVLNKNIDKWVNQAIHSSELIQNGKALLVT-GI 147 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 148 KGLSEVGTGFTHVLMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 202 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 ++ +I +++ + + G+PS + L +I I+ ++P G IS + Sbjct: 203 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ G + + + + L P L+ LP TF L+ +G Sbjct: 263 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 322 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL IG +++ I + +I+ Sbjct: 323 WGLIIGIPIVSFFLDILGVQNSEPRRVTSQIAK 355 >gi|229109412|ref|ZP_04239007.1| UPF0118 membrane protein [Bacillus cereus Rock1-15] gi|228674038|gb|EEL29287.1| UPF0118 membrane protein [Bacillus cereus Rock1-15] Length = 337 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|269794843|ref|YP_003314298.1| putative permease [Sanguibacter keddieii DSM 10542] gi|269097028|gb|ACZ21464.1| predicted permease [Sanguibacter keddieii DSM 10542] Length = 415 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 104/343 (30%), Gaps = 21/343 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +L L G ++ AL + P+ + + A + Sbjct: 30 VVTVFAAIFVWRALGSLTGLIVNLIIALFLALAMEPMILWLVKHGWKR--GAATATVLFG 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSH 129 + ++ LF LE ++ +P + LW ++ Sbjct: 88 LLAAAGAVIALFGRMFLEQAG----------------DLITSLPRTYDSVTLWAENQFDV 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + + + A G + + +++ ++ G + Sbjct: 132 MIPEMEELQAQLLQDYGNEVASRALAIGSSVIGGLFAFATIMLVAYYLAAAGPRFRASIC 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ I I ++A G + +P + L + T Sbjct: 192 GWLRPKNQTEVLRLWEITQIKISDYINSRVVLAAIASFFTGVFLTIIDIPYALPLALFTG 251 Query: 250 IMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P G I ++ L G+ A + + + + + L P + +++ Sbjct: 252 VVSQFVPTIGTYIGGALPIVFALTSGSWQKAVMVLGFIILYQQVENMWLSPKISARALQM 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +F ++ G LG F+ + A I + + + Sbjct: 312 NPAVSFVVVLAFGAVFGALGAFLSLPVAATIQAVATTYLRRHE 354 >gi|212639688|ref|YP_002316208.1| putative permease [Anoxybacillus flavithermus WK1] gi|212561168|gb|ACJ34223.1| Predicted permease [Anoxybacillus flavithermus WK1] Length = 372 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 94/305 (30%), Gaps = 10/305 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y++ P+L A I P + ++ + F+ Sbjct: 44 YWVAPIAVPILFAFITAIFLEPAVKVAQQRIGFKRQSATLLVFSLFTLFMFLSGYFIITK 103 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + I L W + L + FL Sbjct: 104 IVTEAFHFFRHSPMYLNEMIAGWNEL----VARWYKQTEKLPPFVVAELSHQVDLFLTKL 159 Query: 145 GIDFIPRFA----SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + S + ++ + +I LF F D I + + S Sbjct: 160 KTQLTASLSFHKVSALVANVPTFLINFLVYLITLFLFMHDLPKIREAIFSHLTEETKEKV 219 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAP 259 + + V+ + ++++ V L + I ++ IP G+ Sbjct: 220 HFMLSRLSYVVFGFWKAQFLVSLIIFAVSLVGLLLITPKVALFTAFIIWVIDFIPIIGSI 279 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I +I+ + G+ AT L + G I L I+ +T+ P ++G I L L T + G Sbjct: 280 IVMAPWAIFHFVTGDTVLATKLSILGVILL-ILRRTIEPKVMGAHIGLSPLATLISMYLG 338 Query: 320 VRTMG 324 V+ MG Sbjct: 339 VKMMG 343 >gi|319407202|emb|CBI80841.1| permease protein [Bartonella sp. 1-1C] Length = 385 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ +++ + PI F K F ++ T+ ++ +F+V L+ L +++ Sbjct: 52 LFPFIAGIVLAYFLNPIVQIFE-KIGIHRVFGTILITLFIIIIFVVSLIILIPIISGQIQ 110 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG--IDF 148 + +S + + + S + S P L + L + I Sbjct: 111 QFISNGLPIYVNR------IQTFFVEHNFSWVRRYFDSDPNQLHTNIKMLLGQSSDFITS 164 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + G ++ + + F+ D + + +DS + + + Sbjct: 165 LLNSLLKSGKSIVNIISLFVVTPVVTFYILLDWPHMVEVVDSWIPRSHLTTVRSLFHEMD 224 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + G + + + G+ + +G+ +++ IP + +SI Sbjct: 225 RAVAGFVRGQGTVCLILAGYYAIGLTITGLNFALLIGMFVGLISFIPYIGTMIGFILSIG 284 Query: 269 LLI----KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + N + + I FI L+P LVG + L + F L G Sbjct: 285 VAWVQFYPDNWGWIIIVMIVFFIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFGSLFG 344 Query: 325 LLGLFIGPVLMALIAVIWK 343 G+ + A+I V+ + Sbjct: 345 FTGMLVAVPAAAIIGVLVR 363 >gi|126656529|ref|ZP_01727790.1| hypothetical protein CY0110_22537 [Cyanothece sp. CCY0110] gi|126622215|gb|EAZ92922.1| hypothetical protein CY0110_22537 [Cyanothece sp. CCY0110] Length = 361 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 124/351 (35%), Gaps = 20/351 (5%) Query: 15 MIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ I+V ++ + F F A + K S + ++ +S Sbjct: 23 IVVLNIIVFIFVFQQFKSVFYSFTIASFLALLLHHPIIFLEKKLGLSKLYAILLVFLSFT 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW---TKHLS 128 +F V + L +++ L+S + P W+ + W L Sbjct: 83 LIFSVIGIILVPIIVIKFSALLSIL----------PDWIQSTSIKINNISYWFNSNNSLV 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q++ + +FI F + + + ++ +FF + + L Sbjct: 133 DSQTIITKLTDSFQDQLQNFIQGFPNFIFGTIGNLLSIFLIAVLTIFFLFYGNSFLKNCL 192 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + I + + + S L +++ +V+ +L P + G+ Sbjct: 193 HSW---FSSDVGEMIHKTLYRNFNSYLLNQVVLSTVLTIVMIPTLYLLKAPFALLFGLTI 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++P GA +S AVSI L + GNI+ + L I I++ L P L+G L Sbjct: 250 GAFGLVPFGATLSILAVSIILFL-GNIWIGLRVLLVLIIIDQIIENILPPRLLGKLTGLN 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + F ++ G +GL + A ++ + + EKI S Sbjct: 309 PIIILFSVMVGATLGDFVGLITAVPIAATTKSLFNHWSQSNTQELEKIFSQ 359 >gi|147920907|ref|YP_685286.1| hypothetical protein RCIX544 [uncultured methanogenic archaeon RC-I] gi|110620682|emb|CAJ35960.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 385 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 138/373 (36%), Gaps = 33/373 (8%) Query: 12 MRWMIM--FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +W+++ + L+ + ++ FF V+ + I + S PI + + T L Sbjct: 11 AKWLLIGIALTLLLFWIMRSFFDIVVYGIFIYYISRPIKNRLSRHIR-NETLLVTACLTL 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELV--SKVVLANQHGI--PVPRWLSDIPGGMWASELWTK 125 ++ I+ + + GM ++ +V ++ A GI V S + + A L Sbjct: 70 LILPLILVVAYTLLIGMSQLLAVVDDQGLMSAIPAGILANVTASFSSMHSNLSAGRLTEV 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L++ ++ + + + + G F+D L + + + ++ +D + Sbjct: 130 DLANLTPEQMYQALSGYSGWLPEVEQIIIAAGTTFVDILLRLFLVFVVAYYLLKDDNRLK 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKV---IRSTFLGMTIIAIGEGLVLGSAYWLAG----- 237 + + L + R V +++ F G + + +V + L Sbjct: 190 EWFCNTFPRLIEEHNGVFIRYCKAVDADLQAIFFGNLLSIVIFSVVAAVVFQLLSVFAPV 249 Query: 238 ----VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA----------TCLF 282 +PS + LG++ A++P G + + YL I G++ + Sbjct: 250 PSLQIPSPILLGILCGASALLPVIGMWLVVAPLLAYLAI-GSLMAGTLMPNLAYFLVIVI 308 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + +RP++ G KL F G G+ GLF+G +++ L+ + Sbjct: 309 SILLFVQTLPELLIRPYVGHG--KLHIGLLMFAYTLGPIVFGISGLFLGAIVLVLVTHYF 366 Query: 343 KESIMAIKENKEK 355 + + + + Sbjct: 367 RVVVPEMARGGHE 379 >gi|309389223|gb|ADO77103.1| sporulation integral membrane protein YtvI [Halanaerobium praevalens DSM 2228] Length = 353 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 119/333 (35%), Gaps = 20/333 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG---- 85 +F P + A +I P+ F K F+ +I + V+ + + ++ G Sbjct: 30 YFTPFIIAAVIASLINPVVDYFNKKIPIHRGFIVIIVLILVVVILVTMIIIGGAQGYLEL 89 Query: 86 ------MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + + S++ + + + + + +L + + Sbjct: 90 NRLLRNLPDYRSIDSQIKWLSVQNQQLETLIQNWEVSDAVRDAINSNLQLLYNGIRDTLI 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + ++F+ + S F + + I FF RD I + L ++ Sbjct: 150 SVINSILEFLTKLPSVF--------MILFIAFIGTFFISRDRDKIKEFLVNIFPLAIQPK 201 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + + M I+ G+V G L G + +GV A++ +IP G Sbjct: 202 IANVFTQLNSSAVGYIRAMLILITISGIVAGIGVKLLGNQYALIVGVTAAVLDLIPIIGP 261 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + F I +I GN A LF+ + ++G + L L T L Sbjct: 262 ALLFYPWIIVSIIFGNFSQAFSLFILHLFLAG-IRSASEGKIMGKSLGLHPLATMIALFS 320 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G R +G +G +GP + LI I ++ IK Sbjct: 321 GYRILGAIGFVVGPTFLVLIKAIVDSDLIDIKN 353 >gi|119469341|ref|ZP_01612280.1| hypothetical protein ATW7_07809 [Alteromonadales bacterium TW-7] gi|119447205|gb|EAW28474.1| hypothetical protein ATW7_07809 [Alteromonadales bacterium TW-7] Length = 347 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 111/324 (34%), Gaps = 22/324 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + ++L + P + A I P+ F K IA Sbjct: 11 NKSLIVFAALVVVLAGIKSASVIVIPFILAAFIAIICNPLIKFFARYKIPK-----GIAV 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ + + + L + + ++ P + + + +W L Sbjct: 66 MLVVLIIVGLGVSLGGLVGQSINDFSQQL----------PEYKAQL----KEEFIWLVDL 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ I E + + A+ ++ +I+ + F +G +S + Sbjct: 112 ASQYNILINKEQLISMFDPGKMVDVATNMLTGLGGVMANMFLIILTVIFMLFEGPLLSNK 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + E P K + I S T++++ G+++ W+ V + GV+ Sbjct: 172 IHMALED--PDSKMKQIDRFLESINSYLAIKTLVSLATGIIVSVYLWVLNVDYFILWGVL 229 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP G+ I+ + LI A + ++ + P +G + Sbjct: 230 AFMFNYIPNIGSIIAAVPAVLLALITQGPLIAGMVAAGYLTINTVMGNIVEPKFLGKGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFI 330 L L F L+ +G +G+ + Sbjct: 290 LSTLVVFLSLIFWGWLLGTVGMLL 313 >gi|194017243|ref|ZP_03055855.1| sporulation integral membrane protein YtvI [Bacillus pumilus ATCC 7061] gi|194011111|gb|EDW20681.1| sporulation integral membrane protein YtvI [Bacillus pumilus ATCC 7061] Length = 372 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 116/344 (33%), Gaps = 12/344 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M I +V LY F P ALI+ P F+ VI + Sbjct: 11 RSLMMISIAVFAVVFLYQSFPFLYPFWIALIVSCLIHPAVCKIEEITGMPRGFVVVIVLL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD---IPGGMWASELWTK 125 + + + L + L + I + +P + + Sbjct: 71 LFLVVAASFITLLVAEIISGSAYLAKVLPGHLDRMIGIVEQFFTDKILPLYHDVTAQFNT 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASR-------FGMIFLDYCLSIIFMIIALFFFY 178 + + + L I F S+ F + D +++F +A FF Sbjct: 131 LQAGQKESILGQIQALGDEAAAKIGTFLSKTLELIPAFLGLLPDAAATLLFSALATFFIT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D F++ + + + + + I + K I ++ ++ + V Sbjct: 191 KDWFTLKKYGSRIFPAKWMQHTRAILSEIKKAITGFMKAQLLLVAMTIGLVIIGLIILKV 250 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + + + ++P G+ F IY + GN+ A L + I + I + Sbjct: 251 EHALVIALCIGFVDLLPYIGSGTVFLPWIIYSAMTGNLSLAIGLGILY-IVVLIQRQISE 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P ++ I L L T L G++ +G LGL IGP + + Sbjct: 310 PKVLSKSIGLNPLATLVALFVGLKWLGFLGLVIGPASLVVWQAF 353 >gi|114326966|ref|YP_744123.1| hypothetical protein GbCGDNIH1_0302 [Granulibacter bethesdensis CGDNIH1] gi|114315140|gb|ABI61200.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 397 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 72/223 (32%), Gaps = 1/223 (0%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + Q + + +L + G I A+ L S+ ++I + + Sbjct: 156 LDYAQQVVHKARAYLSSAGEK-IAGLAAGAATSTLGGIGSLTVILIVAIYLAASPGIYVR 214 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ ++ F+G + + G++ L GV L + Sbjct: 215 GTLRCLPKSWRPRGAEVMHETAHALQWWFVGQVVDMVMIGVLTWIGLSLLGVKLAGTLAL 274 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A+ +P I+ ++ + A + + A + + P + + Sbjct: 275 IAALCNFVPYVGAIAGAVPAVLVAFGEGPQTALYVGVMFAGVQALEGNVIAPIVQKSTVD 334 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP + T G +GL + + A+ V + + Sbjct: 335 LPPVLTILSQTVLGTIFGPVGLILATPIFAVGMVAVRMIYVES 377 >gi|313902386|ref|ZP_07835789.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] gi|313467317|gb|EFR62828.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] Length = 422 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 109/314 (34%), Gaps = 13/314 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + P + AL++ + P ++ ++ + + V L++L + E+ Sbjct: 30 WPPFVLALVLTYLLAPAVDFLEAQ-GLRRATAILLLYLLITLAAAVALVYLLPGFLDEL- 87 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 N+ G +P + + + + P +++ + Sbjct: 88 ---------NRLGTQLPGYARRLRLLVEGVRQDAARATLPATVRQALLQQIDRTEGWVTA 138 Query: 151 RFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 R A G + L ++ + F+ D + + W ++ R V Sbjct: 139 RLADLTGGLVEGLLGAAPLLLAPVLAFYLLDDLPRLRRWAQDRLGRGHRRRWLELVRAVD 198 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +V+ G ++A GL++ + G+ V LG + A+ +IP PI + Sbjct: 199 QVVGGFIRGQLLVAGFVGLMVTAVATFFGLRFAVLLGALAALADLIPYFGPIIGAVPVLA 258 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + A + + + ++ + L P ++G + + L L+ G GL GL Sbjct: 259 MAALHSPATAIKVAVALVLVQWVENSVLSPRILGQRVGVHPLVVISALLVGGHHFGLAGL 318 Query: 329 FIGPVLMALIAVIW 342 + L V+ Sbjct: 319 LFAVPVAGLAHVLL 332 >gi|319954603|ref|YP_004165870.1| hypothetical protein Celal_3098 [Cellulophaga algicola DSM 14237] gi|319423263|gb|ADV50372.1| protein of unknown function UPF0118 [Cellulophaga algicola DSM 14237] Length = 366 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 124/343 (36%), Gaps = 14/343 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L LY ++ A + A +I PI + + +T ++ V ++ L Sbjct: 20 ILLTLFFLYKIQSVIAYLCIAAVIALIGRPIVIFIRKRLKAPNTVAVILTMVLMVGLLSG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + K L ++ NQ + + + +S + ++ L Sbjct: 80 IIALFIPLLTEQGKNL--SLLDINQLQENINDLYNQVTQYFSSSP---EKVTKMLEESHL 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + FIP F + F + + + ++ FFF +D + L + Sbjct: 135 EKNIFEGLDVGFIPNFLNTFLDVLSTASIGLFSVLFISFFFLKDSNLLQNGLLMFMPNEK 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 K + ++ F+G+ I ++ L G+ + + + + A+ +IP Sbjct: 195 EGKMKNSILKINDLLSRYFVGLLIQLFILFVIYTITLLLVGIENAIVIAFLCALFNIIPY 254 Query: 257 GAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 PI + I L + N I + G + ++D +PF+ +K Sbjct: 255 IGPIIGGVLMIVLTMTTNLDADFSTIILPKAGYVVIGLLIGQLIDNFFSQPFIFSNSVKS 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G++G+ + ++ VI KE + K Sbjct: 315 HPLEIFLIIIIAGLLFGIVGMIVAVPGYTVLKVILKEFLSENK 357 >gi|144899178|emb|CAM76042.1| protein containing domain of unknown function DUF20 [Magnetospirillum gryphiswaldense MSR-1] Length = 353 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 14/307 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + LV LY L+G P ++ + + F P+ A ++ + Sbjct: 14 LAVTLVLLYLLRGVMLPFVAGMALAFFLDPLADRLEK---------AGLSRTTATATITG 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + + ++ + V+A IP L+D + L+ Sbjct: 65 IFFLLVVTLAVLLLPIIQEQVVAFAERIPSYVETLNDRLHPLIVELKRKLSKGDMDKLRT 124 Query: 136 LSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + G+ ++ + I F+ RD + ++DS Sbjct: 125 SVGEHAGEAVTWALGVVKQVLTGGLAIINVLSLLFITPIVTFYMLRDWDLMVAKVDSWLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + + G + + G G L G+ + +G+ + +++ Sbjct: 185 REHADTIREQVAEINRTLAGFIRGQASVCLALGAFYGVGLSLVGLDLGLVIGLGSGLISF 244 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLP 311 +P I+ I L + + G + L P LVG + L + Sbjct: 245 VPYLGTIAGFITGIGLALAQTQSWELPAMVAGIFVAGQMLEGNVLTPKLVGDKVGLHPVW 304 Query: 312 TFFGLVG 318 F L+ Sbjct: 305 IMFALLA 311 >gi|114320847|ref|YP_742530.1| hypothetical protein Mlg_1694 [Alkalilimnicola ehrlichii MLHE-1] gi|114227241|gb|ABI57040.1| protein of unknown function UPF0118 [Alkalilimnicola ehrlichii MLHE-1] Length = 360 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 92/315 (29%), Gaps = 21/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++L L G P+L A + P + + S + Sbjct: 34 LVVLLAGLKAAAGVVTPLLLAAFLAIICAPPLTWMRRRGVPGS---------------VA 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L G+ ++ P + + + G + W P L Sbjct: 79 VLALFVAVGLAFFLLFLALQGAVESMAHQAPHYQARLFGLFDETMAWLAGRGVPAELLPD 138 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + A + + +++A F + + +L + Sbjct: 139 RPPL---PALADLTGLARAVAGGVGQFTATTFLVLLAFMFLLLEETHLPGKLRAAFPR-- 193 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 +R + + + ++ GL++G L GV V G++ ++ IP Sbjct: 194 SRRGGVRARRFLRSVYRYLFIKSATSLATGLLVGVGLALIGVDFPVLWGILAGLLNFIPT 253 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ + + + ++ L P +G + L L Sbjct: 254 VGSILAAIPAVLIAFLGLGVMEGLLALALYVAVNVVIGSVLEPRFMGHTLGLSPLVVLVS 313 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 314 LMAWGWVLGPVGMLL 328 >gi|149037154|gb|EDL91685.1| similar to chromosome 9 open reading frame 5 (predicted) [Rattus norvegicus] Length = 789 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 559 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 618 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 619 GVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 678 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 679 TQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 735 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 736 GPILLCILVV 745 >gi|171779728|ref|ZP_02920684.1| hypothetical protein STRINF_01565 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281830|gb|EDT47264.1| hypothetical protein STRINF_01565 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 317 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 93/268 (34%), Gaps = 6/268 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + P+ I ++ + T I ++ L I Sbjct: 43 ISFLFKPVLSFLAIIMLPLVISAILYYLIKPL-VGLIERRGVNRTASIFIVYAIIVALLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ V + + L P L++ + Sbjct: 102 WAVASFIPMIEGQLTSFVENLPAYVKSVNVESSKLLKSPWLANYQSELQDMLANISDKAV 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FAS + L+II LF+F RD + + L Sbjct: 162 DYAESFSKNAIDWASSFASAIARVT----LAIIMSPFILFYFLRDSHKMKEGLIKALPTR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + K + G +AI G++ + + G+ G+I + MIP Sbjct: 218 MRRPTSRILGDINKQLAGYVQGQVTVAIVVGIMFTIFFNMIGLRYAATFGIIAGFLNMIP 277 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLF 282 G+ ++ V I +++G I L Sbjct: 278 YLGSFLAMVPVVIMGIVQGPIMLIKILV 305 >gi|160882038|ref|YP_001561006.1| hypothetical protein Cphy_3920 [Clostridium phytofermentans ISDg] gi|160430704|gb|ABX44267.1| protein of unknown function UPF0118 [Clostridium phytofermentans ISDg] Length = 434 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 71/193 (36%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I + ++ LSI I L+ + ++ + + + ++R Sbjct: 225 ILNVSISIAKTAINILLSIAISIYMLYDKRMLSKNAARIIYAFIPKKKADSFLDVTRECG 284 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +G TI + G++ + +P + + VI + MIP P I Sbjct: 285 SIFTGFIVGKTIDSTIIGILCFILMSILRLPYAILISVIVGVTNMIPYFGPFIGAVPGIL 344 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + + A + L P ++G L L FG+ G G++G+ Sbjct: 345 LFLFISPIQALVFAIMILGLQQFDGWILGPKILGDSTGLTPLWVIFGITVGGAYGGVIGM 404 Query: 329 FIGPVLMALIAVI 341 F+G +A+IA + Sbjct: 405 FLGVPFVAVIAYL 417 >gi|300926828|ref|ZP_07142596.1| hypothetical protein HMPREF9548_04828 [Escherichia coli MS 182-1] gi|301329802|ref|ZP_07222534.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|309794754|ref|ZP_07689176.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|300417178|gb|EFK00489.1| hypothetical protein HMPREF9548_04828 [Escherichia coli MS 182-1] gi|300844100|gb|EFK71860.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|308121804|gb|EFO59066.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|324018612|gb|EGB87831.1| hypothetical protein HMPREF9542_02706 [Escherichia coli MS 117-3] gi|332104381|gb|EGJ07727.1| conserved hypothetical protein [Shigella sp. D9] Length = 376 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|300087711|ref|YP_003758233.1| hypothetical protein Dehly_0601 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527444|gb|ADJ25912.1| protein of unknown function UPF0118 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 361 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 108/338 (31%), Gaps = 12/338 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI------YSSFISKKEESSTFLAVIAT 67 +++ + V +Y L+ P L+ + P+ Y + E + VI Sbjct: 4 LVVLIALSVLIYSLRSVLLPFFIGLLAAYILHPLILLMERYITLPKPFERHKRLIFVIVV 63 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ IV Y + A+Q V + + + + ++ Sbjct: 64 MLVLLALIV--AVASYMMATLFNTISELSDNASQIFTSVSAYFTGLLESIR-TQFPPDVQ 120 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S + + F+ R + + + + + LF+ +D + Sbjct: 121 ASIDSFVAEALAEIGNAAQGFLSRSVTVI-PTTVGFIFGFAALPMFLFYMLKDWERLRDS 179 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALG 245 L L + + I I+ V+ ++ G + + V + L Sbjct: 180 LQRGLPGLAAVHTRNILNIIGNVLGRYIRAQLLLGSIVGSLTFIGLLIMNVNFGLALLLA 239 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + M+P P + +++ + L + + + L P + G + Sbjct: 240 TVAGLFEMVPTIGPWISGIFAAVIILATYPDLVIWVILLFLLIQGLENNLLVPRVQGQML 299 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + LV G G+ G+ + L A I I++ Sbjct: 300 HIHPAIALLLLVLGAYLAGIWGILLAVPLAATIVKIFQ 337 >gi|167761301|ref|ZP_02433428.1| hypothetical protein CLOSCI_03706 [Clostridium scindens ATCC 35704] gi|167660967|gb|EDS05097.1| hypothetical protein CLOSCI_03706 [Clostridium scindens ATCC 35704] Length = 380 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 119/340 (35%), Gaps = 9/340 (2%) Query: 11 IMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ +Y L GFF P + I + + PI + + + + + Sbjct: 20 VSLTFSLIATILFIYVGFRLLGFFMPFVIGWFISYIASPIVNWLEKRVKIVKKLGSALII 79 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA---SELWT 124 ++V+ + + F+ E+ L+ + Q + G++ + L Sbjct: 80 IAVLGAVGILIYFIGSKLWKEIASLIQNMPKMYQDLESGFGEIGSSLNGVFKVLPASLQD 139 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L ++ + A ++ I I+ +FF + + Sbjct: 140 AWHTMTSNLDKTMGDWMGRISEPTVAA-AGNVAKRIPSVLIATIVTFISAYFFIAERDEV 198 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + + F I L+L + + V + L Sbjct: 199 IEWAKKVSPEPIVRRMSMVIDNLKFAVGGYFKAQFKIMGVVCLILVIGFVILKVHFYFLL 258 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ A + +P G + ++Y L+ + + L + + +V + ++P LVG Sbjct: 259 ALLIAFLDFLPFFGTGTALIPWALYKLLVKDYRMSVGLIILYGVTQ-LVRQLIQPKLVGD 317 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + LPT L G + G+ G+ + ++ ++K Sbjct: 318 SMGMQPLPTLLFLYIGYKAGGIFGMIFAVPIGMIVINLYK 357 >gi|300936465|ref|ZP_07151385.1| conserved hypothetical protein [Escherichia coli MS 21-1] gi|300458387|gb|EFK21880.1| conserved hypothetical protein [Escherichia coli MS 21-1] Length = 376 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERILQRMDSEKMVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|294669221|ref|ZP_06734301.1| acetyltransferase, GNAT family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308853|gb|EFE50096.1| acetyltransferase, GNAT family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 377 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 123/334 (36%), Gaps = 14/334 (4%) Query: 17 MFIILVSLYFL--KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +F I+ S L + P + A ++ + P+ K + ++ + Sbjct: 38 VFFIVASWLVLALRDILTPFIVAAVLAYILNPLVEKLRDKGVSRAPASMLVMMFA----- 92 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL L ++ + L+++ + ++ + + S + ++L Sbjct: 93 ---LLILLALLLILIPMLLTQFQNLTNRLPQLIDFVQNKALPWFNSHFGAHIPLNKETLL 149 Query: 135 ILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ T N I G ++ + + L++F D S + +L Sbjct: 150 NWLQSHTGTLQNTASKIAPTLMEQGGALASGLSNLALLPLLLYYFLYDWQRWSHGIRALM 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F + +I + +V+ G ++ + G+V G L G+ S A+G+I ++ Sbjct: 210 PRRFIDAYTRIGGEIDEVLGEFLRGQLMVMLIMGVVYGVGLMLTGLDSGFAIGMIAGLLV 269 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFL 310 IP + ++ + +++W + + + P +VG I L Sbjct: 270 FIPYLGAFTGLLLATIAALLQFGSWQGLIWVWLVFVVGQLLESFLVTPKIVGDRIGLSPF 329 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ IG L A+ V+ +E Sbjct: 330 WVIFSLMAFGQLMGFVGMLIGLPLAAICLVLLRE 363 >gi|284051289|ref|ZP_06381499.1| hypothetical protein AplaP_07427 [Arthrospira platensis str. Paraca] Length = 382 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 116/327 (35%), Gaps = 11/327 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++++ + P+ + S K ++ ++++ L + + ++ Sbjct: 40 IILIMISVVLAASIIPLVNWVQSLKMPR-WLAVIVVYLTLIGGITGLGLIIGPSVVDQIN 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV ++ + + + + ++ G + L ++ + I Sbjct: 99 LLVRQLPIFAERSLDLVSNIASSLGEDIPA------LIDRLVDTQSLTNWVIRSSQQLIL 152 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R + S+I + + D ++ + L + + + V + Sbjct: 153 RSYG-ITRGIVGGVFSLILSLFVSGYMVADSKTLVKSFVQLFPYPWNDRLAAQAVPVGRR 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 I S G I++ G+ + + G+ + LG I +IP PI + Sbjct: 212 IGSYIRGRLIVSAILGVSITTCLGFLGLKDYALGLGAIAGFTNLIPFLGPILGAIPALVV 271 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L KG L L+ I + L P LVG + + L ++ GV+ +GL+G Sbjct: 272 ALAKGGFLFFWVLLLY-VIVQNLETYVLDPLLVGSSVGVHPLYQLLSVLAGVQLLGLIGA 330 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 I P A IA + + + K E+ Sbjct: 331 LIVPPWCAGIAALVENLYLEPKRLAEQ 357 >gi|199597441|ref|ZP_03210871.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|199591701|gb|EDY99777.1| Predicted permease [Lactobacillus rhamnosus HN001] Length = 358 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 122/344 (35%), Gaps = 23/344 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I + + Sbjct: 5 EKFINNVPVRRTVVLFSVFLVLWFARSIMSDILLTFIFALLVSRLVHAVQRHVHVRP--- 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V V+ ++I+ +L L Y + + ++ + + V + + Sbjct: 62 ----FVIVVPVYILVILGLIYAAVHYVPAIIHQTITLFNS---VQDFYNSDAFANNQVMQ 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + +L +T G+ + +A G + L LS I FFF + Sbjct: 115 WVLQSTKSLNLTEQLKT-----GLSTVLEYAGNIGAMGLTLVLSFILS----FFFTIELD 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 S+ + F Y+K + K I + IA+ ++ +P Sbjct: 166 SLPAFGQLFLDSPFGWYFKDLRYFALKFINTFGVVMEAQIFIAVVNTVITTITLLFMKMP 225 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +L ++ ++++IP GA IS ++I G + + + A + L P Sbjct: 226 NIPSLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVITILIMIAAIHVLEAYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ R G GL +G + + Sbjct: 286 KFMSSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 329 >gi|309789729|ref|ZP_07684309.1| hypothetical protein OSCT_0260 [Oscillochloris trichoides DG6] gi|308228215|gb|EFO81863.1| hypothetical protein OSCT_0260 [Oscillochloris trichoides DG6] Length = 379 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 120/357 (33%), Gaps = 17/357 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +I+ + ++ + ++ P + A+I + P+ + + V+ V Sbjct: 13 KLITAGIIVALTILFIQHIEHVLPPFIGAIITAYLFNPLVTWLQRRTNTRRAIWIVVLYV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L +++ + + +L A Q + + +D EL Sbjct: 73 FAFLLLYGLFTWIWPIIVQQTGDL---ARSAPQFANDIADFFAD------HQELDLGGFV 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + ++ L+ + I+ +I F+ + + + Sbjct: 124 IDLGPLEEQLISLVRDLGAWLSGNVPGLVFSALETVIYILVYLIITFYLLLEAGHLKRWA 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + + V + G I+ + ++L + VP + + V + Sbjct: 184 TNLIPPPYREEIGSLGTQIDAVFSAYIRGQLILIVIMSVLLYIPLSILKVPYALVIAVAS 243 Query: 249 AIMAMIPGGAPISFTAVSIYL--------LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ++P P S ++I ++ A + + I D + P + Sbjct: 244 GTLEILPIIGPWSAAGIAIIATLFQTHIPFGLSHLGLAALVGIIYFTLRQIEDHFIIPNV 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +G ++L F ++ G G GLF+ + A+I +I + + E + Sbjct: 304 MGPLVRLHPAVVIFAILAGGALAGAFGLFMSIPVAAIIRIILSYLYRKLTDQPEPLQ 360 >gi|254785195|ref|YP_003072623.1| permease [Teredinibacter turnerae T7901] gi|237687517|gb|ACR14781.1| putative permease [Teredinibacter turnerae T7901] Length = 367 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 11/300 (3%) Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + + C + L+F+ ++ L+++ G + L + + Sbjct: 67 NLSVTLTFLVLTCSIFLSLVFVVPALWRQLINLLNETPRMLVEGQNLLLLLPEKYPALVT 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ + T I F+ + + + ++ + I +FFF + Sbjct: 127 ELQVKELIATLRIEM--------TQWGQSILSFSLTQLPVLVAALIYLVLVPILVFFFLK 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + L ++ P K + + I + G I + G + + L + Sbjct: 179 DGEQMINWLSNMLPTRRPVMRKIWMEMNLQ-IANYVRGKVIEIVIVGGISSITFSLLDLN 237 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLR 297 + LG+ + +IP GA + V++ + N + + +D L Sbjct: 238 YALLLGISVGLSVLIPYIGAAMVTLPVAVIGFFQWGWSNDFFYIMLAYGVIQALDGNVLV 297 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L +K+ + ++ G G+F L L I A+ E + I+ Sbjct: 298 PLLFSEAVKMHPVAIVLAVLVFGGLWGFWGVFFAIPLATLCKAIMNAWPTAMLEERPAIA 357 >gi|22138063|gb|AAM93408.1| cpsX [Streptococcus thermophilus] Length = 378 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 106/292 (36%), Gaps = 4/292 (1%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELW 123 ++ + + ++ + + ++ + ++ ++ ++ I + WL + Sbjct: 79 VSLLLAFATIGLIFTWVVFTVLPDLIDSINTLISQDRSAINNLINWLLKNKSLQKIIQDL 138 Query: 124 TKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S L+ NG+ + ++ +SI+F L + G Sbjct: 139 GGVTQVRELINSYSAQLLQQIMNGLTNFLTSLTSLPSTLINLFISIVFSCYVLVGKEKLG 198 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +++ +D + + I+ + F+ +I A G + + P Sbjct: 199 SQVNRLVDVYLGRY-GKTFHYVVAILNNRFHNFFVYQSIEACILGTLCYIGMRIFNFPYA 257 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ AMIP + L++ ++ A + I + P++V Sbjct: 258 ATISILIGFSAMIPVLGAYIGVTIGTILIMTHSVILALLFVAYVVILQQFEGNLIYPYVV 317 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GG LP + + G G+LG+ + + A + I K++++ ++ K Sbjct: 318 GGSTGLPVVWVILAITIGSALGGILGMLVSVPVAATLYQIVKDNVVTREKAK 369 >gi|292491904|ref|YP_003527343.1| hypothetical protein Nhal_1835 [Nitrosococcus halophilus Nc4] gi|292491920|ref|YP_003527359.1| hypothetical protein Nhal_1854 [Nitrosococcus halophilus Nc4] gi|291580499|gb|ADE14956.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] gi|291580515|gb|ADE14972.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 352 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 108/332 (32%), Gaps = 18/332 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L+ L++ V + +++ + + S + + +M LF V Sbjct: 28 VAVTLLFLWYAIPVLLLVFAGILLAILLHGLSDWIARRTFLSYGWSLTFVVLDLMTLFAV 87 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + L + +P + E + + Q L L Sbjct: 88 GLSLVAPDVADQAYHLSQQ-----------------LPEALKRLEQYFAQYTWGQELLAL 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L + +F+ AS L+ S I ++ + + + L Sbjct: 131 IDKDLMPS-REFMLTQASNIFSSTLNVLTSFIIILFIGLYGAAQPRLYVEGITQLVPIRR 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + V + + G I G++ WL G+P + LG++ ++ IP Sbjct: 190 RQRVRTVLHQVGQTLLWWLFGRMISMTIVGMLTVPGLWLLGIPHILTLGLLAGLLTFIPY 249 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ + L + + + L L P + + +P + T Sbjct: 250 IGPVLSVVPAALLALLQSPIQVVNVLLLYLFLQSFEGYLLTPLVQKRTVAMPPVLTISVQ 309 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 V +G GL + L+A + V+ + + Sbjct: 310 VLFGTLLGFFGLMLATPLVAALMVLVRMLYVE 341 >gi|182625645|ref|ZP_02953414.1| putative domain of unknown function [Clostridium perfringens D str. JGS1721] gi|177909047|gb|EDT71522.1| putative domain of unknown function [Clostridium perfringens D str. JGS1721] Length = 345 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 117/322 (36%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + V +++D+ M EL + + E + Sbjct: 94 KEGESFDGLING-------VEAFINDLIMKMKFMEL---------GIFDVVEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMVFIVPIAVVIKVLFDDW 339 >gi|154486832|ref|ZP_02028239.1| hypothetical protein BIFADO_00664 [Bifidobacterium adolescentis L2-32] gi|154084695|gb|EDN83740.1| hypothetical protein BIFADO_00664 [Bifidobacterium adolescentis L2-32] Length = 507 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 111/353 (31%), Gaps = 23/353 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 + P+ + R ++ I + L ++ V+ +L + P+ + Sbjct: 39 DPRRPPEWLGRALLYIAIAIVLLSFCWRSWGKIEYLIIDVVISLFLALAVEPVVIPLVKH 98 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +F ++ A + + L V + ++ L + + Q Sbjct: 99 -GWKRSFASIFALLMLGVLLCVMFGLFGNLFVQQVIALCNGLPALYQQ------------ 145 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + ++ L SL ++T+ + A F + L+++ +I+ Sbjct: 146 ICDFVAQYTDFKLPEINSLGGEILKNIQTSWVTDFAGTAISTVSGFFSFLLNLMTVIMTT 205 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ G + + + + + I S I+A+ Sbjct: 206 FYISAAGPKLRRAACQWMAPSAQRRFLFVWTVSQTQISSFLFSRAILAVLNAFFTSICLM 265 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 VP + L + +++ IP G I ++ ++ A + + + I Sbjct: 266 ALHVPYWMPLALFCGVVSQFIPMLGTYIGGALPVLFAWGSCGLWQAIAVVAFICVYQQIE 325 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P + + + F ++ G +G F+ ++A I I + Sbjct: 326 NLIFAPKISRRTMDVNDAVAFLAVLAFGSLFGAIGAFLALPIVASIQTIARTY 378 >gi|126723478|ref|NP_780727.3| hypothetical protein LOC242474 [Mus musculus] Length = 880 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 650 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 709 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 710 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 769 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 770 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 826 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 827 GPILLCILVV 836 >gi|119510569|ref|ZP_01629699.1| hypothetical protein N9414_18158 [Nodularia spumigena CCY9414] gi|119464730|gb|EAW45637.1| hypothetical protein N9414_18158 [Nodularia spumigena CCY9414] Length = 386 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 120/324 (37%), Gaps = 15/324 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I ++ ++ A ++ F +P+ S++ ++ +A++ + + + + Sbjct: 36 ISAIFHYFHSLIVILVGASVLAFLLNYPV--SWMERQGARREQVAILVFLIALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L+ + T +L ++ Sbjct: 94 VTLFPLALTQAQQLVARLPELIDSGRSQLMMLNQ--------KAETLNLPINLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + I ++ L + ++ F+ + G + Q L F A Sbjct: 146 NDRVKSQLQAIAGQVLNLAVVTFTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPTRFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + K R+ ++ F+ I++ L + VP + G+ IMA++P G Sbjct: 206 PFSKTVRL---SFQNFFITQLILSTCMASALIPTFLWLKVPFGLLFGLTIGIMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 S-VGIALTTSLVALQDFSMGVKVLIAAVIVQQILENLIAPRILGNFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G R GLLG+ + +I Sbjct: 322 GARVGGLLGVIVAVPTAVIIKTAL 345 >gi|167754689|ref|ZP_02426816.1| hypothetical protein CLORAM_00192 [Clostridium ramosum DSM 1402] gi|167705521|gb|EDS20100.1| hypothetical protein CLORAM_00192 [Clostridium ramosum DSM 1402] Length = 396 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 94/298 (31%), Gaps = 11/298 (3%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + + +CL ++ + + + L+S + Sbjct: 84 RKKRGLSIIATLILFICLIVLIASIVIPNLISSLISLISNTSAFLTSVFNNIDDI----F 139 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---I 172 + + ++++ + L + + +D + R A ++ + + I Sbjct: 140 IYFNIDFRMENIASVKDLINMPWQDMVGQALDILTRSAGGIMNNATNFLSTFGVVFTGFI 199 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + + +QL L + +V + G + A ++ Sbjct: 200 FSLYLLGNKETFLRQLRKAIGALCGYKVTCVIFDYAHKTNEVFSNFISGQLVEACILWVL 259 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 L P + I +I + +P PI+ V L++ + A ++ I Sbjct: 260 YYVTMKLFNFPYPELIATIISIFSFVPFFGPIAAMFVGAVLILSKDALMAIWFMVYFQIL 319 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + D + P +VG + LP + + G+ G+ I A + + E I Sbjct: 320 SQLEDNFIYPRVVGNSVGLPGIWVLLSIFVFGDLFGVFGMVIAVPSAACLYSLASEVI 377 >gi|148927564|ref|ZP_01811042.1| protein of unknown function UPF0118 [candidate division TM7 genomosp. GTL1] gi|147887092|gb|EDK72582.1| protein of unknown function UPF0118 [candidate division TM7 genomosp. GTL1] Length = 344 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 113/342 (33%), Gaps = 20/342 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAVIATVSVMCLFIVPLLFL 81 S++ + + AL + S + S IA V V+ L L + Sbjct: 3 SVWSARDALLTIGIALFLALALNMPVSYIAKRLPGKSRAGATAIAFVLVVTLLGSFFLTV 62 Query: 82 FYYGMLEMKELVSKVVLANQH--GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++ + G VP I + + L ++ ++ + + Sbjct: 63 VPPVIEQTARFAERIPETIEDIKGQTVP-----IDNFVDSYGLRGQYDDALENTQKQAAN 117 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP-A 198 F + G F+ + LD + + +++ F +G Q+L L + Sbjct: 118 FASSLGGSFVSGVGA-----VLDAAVRTLIILVLTFLMLVEGPMWLQRLWGLYRNPTRLE 172 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGV----ITAIMA 252 + + + +V+ G ++A + P L + + + Sbjct: 173 RHRALVNRMYRVVSGYVTGQILVASIASTGSALTVLILSAFFPFPANLAMPVAAVVFVGG 232 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP ++I LL + A ++ I + + + P + ++L L Sbjct: 233 LIPMFGATIGGIIAIVLLALNDFTAAMLFTIYFVIYQQVENNFISPTVQSRTVELSALTV 292 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G+ G+LG + + + V+ + + + +E Sbjct: 293 LTAITIGLSLFGILGGIVSIPVAGCLRVLLNDYLEHNRRARE 334 >gi|149177786|ref|ZP_01856386.1| hypothetical protein PM8797T_08974 [Planctomyces maris DSM 8797] gi|148843436|gb|EDL57799.1| hypothetical protein PM8797T_08974 [Planctomyces maris DSM 8797] Length = 419 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 2/203 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T F ++++ ++ F + + L + Sbjct: 201 TQPAQQAMSFVGSMFKSTFGVVVNVVLILFVGLFLAVSPQTYRDGVVVLFPPERRDRIQG 260 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + LG I GL L GVP LG+I+ ++ IP + Sbjct: 261 LMTQLSDTLWHWLLGRFGSMIITGLGAWLVLSLIGVPMAGTLGLISGLLTFIPNIGSLIA 320 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF-LPTFFGLVGGVR 321 ++I + + A + + + P + + LP L F + GV Sbjct: 321 FCLAILIALPKGPTTAALVVPAFIGLQLVESYLITPLIQEQQVSLPPALLISFQAIMGV- 379 Query: 322 TMGLLGLFIGPVLMALIAVIWKE 344 G LG + L+A VI +E Sbjct: 380 LFGFLGAMVASPLLAASKVIVQE 402 >gi|331674959|ref|ZP_08375716.1| putative membrane protein [Escherichia coli TA280] gi|324009362|gb|EGB78581.1| hypothetical protein HMPREF9532_00949 [Escherichia coli MS 57-2] gi|331067868|gb|EGI39266.1| putative membrane protein [Escherichia coli TA280] Length = 376 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|209886510|ref|YP_002290367.1| putative domain of unknown function [Oligotropha carboxidovorans OM5] gi|209874706|gb|ACI94502.1| putative domain of unknown function [Oligotropha carboxidovorans OM5] Length = 365 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 118/348 (33%), Gaps = 31/348 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ I+ LY +GFF PV++A+I+G P + + A+I ++ + Sbjct: 36 ALLVLSIVAVLYVARGFFLPVVTAVILGTMLSPAAKRLEALRIPRPVSAALIVVLTWIAF 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L +PV W +P + P ++ Sbjct: 96 VFIIGLI----------------------SVPVVEWFDKLPELGPILKNKLHVFDRPLAI 133 Query: 134 KILSETFLKTNGID-------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + + + + ++F + + F Sbjct: 134 WQQLQVLLGSPEGAEQPFQFPKVAWVQPTIEFLSPTFTEILLFFAVLVLFIASWPDLRRA 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + +I + + L +T+I G G+ G A LAG P+ LG Sbjct: 194 LVMNFQDRDSRLRTLRILNAIETKLGGYLLTVTVINAGLGIATGLACALAGTPNPAGLGA 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIF--NATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A + IP PI V + + I A L A F+ + P ++G Sbjct: 254 LAATLNFIPIIGPILMFVVLLGVGIVAAPTLSGALVAPLAFAAFAFVEGHFVTPAIIGRR 313 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L L F L G +G F+ L+ + +I + + +++ Sbjct: 314 LALNALAVFLALAFWTWLWGPMGAFLSSPLLIVGLIIKEHMLPEREQS 361 >gi|26250089|ref|NP_756129.1| hypothetical protein c4267 [Escherichia coli CFT073] gi|26110518|gb|AAN82703.1|AE016768_121 Hypothetical protein yhhT [Escherichia coli CFT073] Length = 376 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPRFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|84515334|ref|ZP_01002696.1| Lipocalin-related protein and Bos/Can/Equ allergen [Loktanella vestfoldensis SKA53] gi|84510617|gb|EAQ07072.1| Lipocalin-related protein and Bos/Can/Equ allergen [Loktanella vestfoldensis SKA53] Length = 367 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 28/353 (7%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 M + LV L+ L P + I + P+ S I T+ +FI+ Sbjct: 16 MAVFLVVLWALGDVILPFVLGGAIAYLLDPVADRLQRA-GLSRVLAVSIITLVAALVFIL 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L + + + L++ P + G+ A ++ Sbjct: 75 LILLVIPTLVKQTTALIN----------TAPALFERLQAGLTARFPDLIEPESTIRQQLQ 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + M ++ + ++ + + F+ D ++ ++DSL Sbjct: 125 AIGETIQARGGELINGVLSSAMGLVNIIVLLVIVPVVAFYLLLDWDNMIAKIDSLLPRDH 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A + + + + + S G + + G LAG+ + +G I ++ IP Sbjct: 185 VATVRHLGSEIDRTLASFIRGQGTVCLILGTYYALGLMLAGLNFGLIVGFIAGLITFIPY 244 Query: 257 G-----------------APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 A + N + A+ F+ L P Sbjct: 245 VGALVGGALALGLALFQFWGAVELADGDTVTYATNWLRIGIVGAIFALGQFLEGNVLTPK 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LVG + L + F L G +G+ + + A+I V+ + + +++ Sbjct: 305 LVGSSVGLHPVWLIFALSVFGSLFGFVGMLVAVPVAAVIGVLIRYGLGQYRDS 357 >gi|186680650|ref|YP_001863846.1| hypothetical protein Npun_F0102 [Nostoc punctiforme PCC 73102] gi|186463102|gb|ACC78903.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 345 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 131/350 (37%), Gaps = 23/350 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVL----SALIIGFT-SWPIYSSFISKKEESST 60 LN ++R++++ ++ L +F V+ A I+ F S+P+Y ++ Sbjct: 13 LNNLALVRFLLLVASGWAIVQLLAYFEAVIVIFTFAAILAFLLSYPVYGL---RRFLPHG 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + ++ + + + ++L+ + +P+ L Sbjct: 70 VAVGVVFLLSIVIIGGLIITVGLTVLSQGQQLIDSITAFLNSLVPLLEGLEGF------- 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q E L+ + + + F+ ++ I + + FF D Sbjct: 123 ----LRTRNLQIDLSFIEEQLRNQAVSTLVTSLAIL-QGFMTNFVTFILIAVVAFFMLLD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + + I+ + F G +++ + + VP Sbjct: 178 GDKLWNFILKIVPK---QRRNRFTNIIRRSFLGFFRGQLLLSGFLTSSTFLVFLVLKVPF 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L +I I+ +IPG + ++ ++ A + + I I D + P + Sbjct: 235 ALILSIIIGIVDIIPGIGATLGVSTVTLFVLSQGVWLALKVLIACIILQQIQDNLIAPRI 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G + L + FF L+ G R GLLG+FI + +I +++ M + Sbjct: 295 MQGALNLNPVVIFFALLVGARVAGLLGVFISIPIAGVIVSLFEIDEMKSE 344 >gi|182417082|ref|ZP_02948460.1| putative protein of unknown function [Clostridium butyricum 5521] gi|237668993|ref|ZP_04528977.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379091|gb|EDT76595.1| putative protein of unknown function [Clostridium butyricum 5521] gi|237657341|gb|EEP54897.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 390 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 124/358 (34%), Gaps = 27/358 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-----------SKKEESSTFLAV 64 I+ +L ++ + P+L A++I + +PI K + Sbjct: 36 ILGNVLSVIFSIISLLKPLLLAIVIAYILYPITKLIENFLENNKILKIQKFGTRRITAVI 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLE------MKELVSKVVLANQHGIPVPRWLSDIPGG-- 116 ++ VSV+ + + +++ + + ++S + L + + + Sbjct: 96 LSYVSVLAILTALIWGIYFMIGGQLSSNTTIANIISDINLYFDNNPFSASSIKETIESFN 155 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 ++ +L +N + S F+ + +SI + + +F Sbjct: 156 SPIISALQPYIVDGFNLIQTYVMKNLSNMTSSLVSIGSSIATFFIAFIISIYLLKDSEYF 215 Query: 177 FYRDGFSISQQLDSLGEH--LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 SI ++L L I I+ +V G + A G++ A Sbjct: 216 I-----SIWKKLYYLIFRGGSAGNKLNYIFSIIHEVFGKFIRGQLLEAFFVGVLSSIALS 270 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +AG+ +G I I MIP PI T ++ + + + + + +D Sbjct: 271 IAGIKYSFVIGTIAGISNMIPYVGPIVGTVLAAVMGLLSGNPIKILYAIIAMLIVQQIDN 330 Query: 295 -TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L P +VG + L + T ++ G GLLG+ I L A V++ E Sbjct: 331 QLLAPQIVGNSVGLHPVFTMMAILIGGNVGGLLGMLIAVPLAASFKVLFTTWYHKHIE 388 >gi|328886993|emb|CCA60232.1| integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 362 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 19/334 (5%) Query: 13 RWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +I+ +++ SL+ + G F + L+I P+ + + Sbjct: 22 RILIVGVLVYSLFAVLGRFHEIGVALFLGLVITALLRPLADLVARGLP--RPIAVALTLL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + E LV + + WL P + L Sbjct: 80 GSIALVLGVLALVGEAVAGERSTLVREFRDGIGR---IEDWLERPPFRLDPGAL------ 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ FL ++ I A + ++ + + FF G Sbjct: 131 --GGLQARIGEFLSSHRSTLISE-AVSGAHHVVAVLTTLALALFSSVFFIHSGDRQWAWF 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + G+ ++A +++G A WL GVP V L ++ Sbjct: 188 KEQLPGSVRERVATGGRAAWRTFTGYTHGIVLVAAVNAVLVGIALWLLGVPLAVPLALLE 247 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P G+P++ ++ L A + + I L P ++ ++L Sbjct: 248 FLAAFVPLIGSPVALAVAAVVALAAKGPVVAAIVIGLIVVIGQIEGHLLHPIVMSWAVRL 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L +V G G++G + L+++I + Sbjct: 308 HPLVVAVTVVAGTIAAGIVGAVVAVPLVSVIWSV 341 >gi|88608019|ref|YP_506086.1| PerM family permease [Neorickettsia sennetsu str. Miyayama] gi|88600188|gb|ABD45656.1| permease, PerM family [Neorickettsia sennetsu str. Miyayama] Length = 327 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 111/329 (33%), Gaps = 21/329 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + I+ + + + S +++ + L I+ ++ Sbjct: 2 LFAFAFSFILAYFLNRSTTKLAALI-GSRGIASLLVVAFLSILVILVFSLAIPLLYHQLI 60 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDF 148 + P+ ++ I + S + + L E L Sbjct: 61 LFLKGA----------PQLIAYIENSIKISSPGLHSFLEERGMSSLFEYILSLVPQLSTK 110 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I + ++ + + +IF + LF+ +D ++ + + + ++ Sbjct: 111 ITQHLWNSTLVLANIVILLIFTPVILFYLLQDWPKMTNAIKEIIPLKHRTAFSNQVTLMD 170 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 I LG I+ G++ + AG+P + +GV T ++ +IP I+ S Sbjct: 171 ASISGYVLGQMKISFILGVLYTVLLFFAGMPYYFLIGVSTGMLTIIPYFGNITGLITSHL 230 Query: 269 LLIKG-----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + ++ T +F++ + L P L+ + L L F + G Sbjct: 231 VALSRASSILDVLPITLIFIFCGAIEGL---FLSPKLLSKSVNLHPLWVIFSMTVGGMLC 287 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GL G+ + + A +A + I K++ Sbjct: 288 GLAGILLAVPVAATVAGFVRLGISYYKDS 316 >gi|325168727|ref|YP_004280517.1| integral membrane transporter [Agrobacterium sp. H13-3] gi|325064450|gb|ADY68139.1| integral membrane transport protein [Agrobacterium sp. H13-3] Length = 667 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 15/305 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE--------LVSKVVLANQHG-- 103 +K AVI V+ + I F+ + + E +V+KV +Q G Sbjct: 90 RKHSVPKIAAVILAVASAFMAIALFSFVVATQVTNLAENIPTYQRNIVTKVQALSQAGSG 149 Query: 104 ---IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + + G + + + ++ F + Sbjct: 150 NGVLEHLSKVVERVGAELQTRAVESQDEQSTAPTMREPMPVEIVTRSHPVETLGNFILPL 209 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + + +I+ + F + + + L + K + L + Sbjct: 210 ISPFATAGLVIVLVIFMLIEREDLRDRFIRLVGLGDLHRTTAALQDAGKRVGKYLLMQLV 269 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + + W+ G+P+ + G++T ++ +P P+ + ++L + + + Sbjct: 270 VNALYAFPITIGLWVLGIPNAILWGLLTLVLRFVPYIGPVIGMVLPLFLALAISPGWSLV 329 Query: 281 LFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + I + + P+L G L + + G LGL + L + Sbjct: 330 AGVAALFIITELISNNVVEPWLYGSHTGLSPMAIIISAIFWSWLWGPLGLMLSTPLTVCL 389 Query: 339 AVIWK 343 V+ + Sbjct: 390 VVLGR 394 >gi|308050275|ref|YP_003913841.1| hypothetical protein Fbal_2565 [Ferrimonas balearica DSM 9799] gi|307632465|gb|ADN76767.1| protein of unknown function UPF0118 [Ferrimonas balearica DSM 9799] Length = 362 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 113/326 (34%), Gaps = 25/326 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++L + P L AL I P+ + K S +A +VM I+ Sbjct: 23 MVVLAGIKSASAIVVPFLLALFIAIICSPLVRGLMRLKLPRS-----VAIFAVMAFVILA 77 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ +E + L I + Sbjct: 78 GTWIATLVGSSINDFTRQLPEYR----------------AQLTEAFGVVLEKANQFNIST 121 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + A+ +++ +++ + F + ++++L Sbjct: 122 DQLKEQFDPGRLMSVATNIVSSLGGLMTNMLLIVLTVVFMLFESAGLNRKL-HYALDDPQ 180 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 K+I R + V R + +++G G++ G +L GV + G++ + IP Sbjct: 181 MRLKQIDRFLESVNRYLAIKTV-VSLGTGIICGLGLYLIGVDYFLLWGLVAFLFNYIPNI 239 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G+ I+ LI+ + A + ++ + P ++G + L L F L Sbjct: 240 GSIIAAIPPVALALIQLGVGPAAGVAGLYVAVNMVMGNLVEPRMMGRSLGLSTLVVFLSL 299 Query: 317 VGGVRTMGLLGLFIG-PVLMALIAVI 341 + +G +G+ + P+ M + + Sbjct: 300 IFWGWLLGSVGMLLSVPLTMIVKIAL 325 >gi|327405457|ref|YP_004346295.1| hypothetical protein Fluta_3486 [Fluviicola taffensis DSM 16823] gi|327320965|gb|AEA45457.1| protein of unknown function UPF0118 [Fluviicola taffensis DSM 16823] Length = 380 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 126/339 (37%), Gaps = 19/339 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ +I V ++ PV+ A I G PI S K +I Sbjct: 9 QKRIFNILLLVVIGVIVFLGSDILFPVILAFIFGVLIRPIDSFLQKKWRFPKILSVIITV 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +F L L +L + + W++ T + Sbjct: 69 AIAIVIFAGVLFLLGLQLKDFFSDLPKLEKNMMKVIHDIGDWINH-----------TFGI 117 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S+ + KI+ E +K + + F + G ++ I + + LF F + Sbjct: 118 SNLKQEKIVKENLMKGGSLVSMESFGTLTGA-----LVNFILVPLYLFLFLFYRELLLGF 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + I + +IR LG+ + + WL GV + LG++ Sbjct: 173 LMRLVSAKSSERMQIIVNDIKVIIRMYILGLLLEIAIVAALTTLGLWLIGVKYSLFLGLL 232 Query: 248 TAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGP 304 A++ +IP + F + I L +I + + + ++D L P +VG Sbjct: 233 VALLNLIPYVGILVANFLSCLISLSNNPDIQQSVLGMVAVIGVVQLIDNNILLPRIVGSK 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +++ L + ++ G G+ G+F+ + A++ V++ Sbjct: 293 VRINALASILSVIVGGALAGVSGMFLAIPITAILKVVFD 331 >gi|170782757|ref|YP_001711091.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157327|emb|CAQ02514.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 411 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 101/287 (35%), Gaps = 13/287 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I+ + V+ + + + + + ++ + + +L+D P + Sbjct: 102 KWLAVAISEIGVIVAVAALVYLVTTQIIGQYDSIRAQTLTRY---ADLRGFLTDGPLQLS 158 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +++ + L A ++ ++ + F Sbjct: 159 EQQLNDAYAQAVDAVQRDAGALLSG---------ALSVTSSLGHVLTGVLLVLFSTLFIL 209 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + + L L + +++ ++A+ + + + + GV Sbjct: 210 IDGAGMWRWVVRLFPRLARPAVDGAGKAGWTTLQNFVKVQVLVALIDAVGIAGGAAIIGV 269 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + +GV+ + + IP + +++++ L+ + A + + I L+ Sbjct: 270 PLAIPIGVLVFLGSFIPIVGAVVTGTLAVFVALVYNGLTQALIMVGIVLLVQQIEGHVLQ 329 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P ++G +K+ L + G G+ G F L+A + + K Sbjct: 330 PLIMGSVVKVHPLAVVLSVAAGGMVAGIAGTFFAVPLVATLNSMVKH 376 >gi|150015906|ref|YP_001308160.1| hypothetical protein Cbei_1020 [Clostridium beijerinckii NCIMB 8052] gi|149902371|gb|ABR33204.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 381 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 113/326 (34%), Gaps = 12/326 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P + A+I + P+ S F + + +I ++ L I+ L F + + Sbjct: 47 MSPFIYAIICAYILNPVVSFFENNFKTRRAISILITYFIIIALIIIILFFTIPSIVDSIV 106 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG-IDFI 149 + ++ + + +W++ + L + + ++ S+ T G + Sbjct: 107 NITKEMPAYVEI---IQKWINTLLQNERIKTLIVQAGLLNKLQEMSSQIGSVTIGLLQNF 163 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK----ISR 205 + F + + I L D + ++ ++ +F R Sbjct: 164 VMYLLSFTSNLVSVIFGFLISIYVLL----DKEKLLKRARTITYMIFNEEKGNKLVTFIR 219 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 K+I I + L+ + G P + +I I MIP P+ V Sbjct: 220 TYNKMIGVYIGIKAIDSAIISLISLIGLLIVGEPYAPLIALIEGITNMIPYFGPLIGEVV 279 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I + A +F+ L P L+G + + L G+ G G Sbjct: 280 GAGVAIFVSPMKAFMVFILLLCIHLFDAWYLDPKLIGKKVGVSPLGIILGVAIGGGFWGP 339 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 G+ +G MA I + +++++ ++ Sbjct: 340 FGMLLGSPTMATIKIYYEKTVEEFRK 365 >gi|237733563|ref|ZP_04564044.1| permease [Mollicutes bacterium D7] gi|229383396|gb|EEO33487.1| permease [Coprobacillus sp. D7] Length = 396 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 94/298 (31%), Gaps = 11/298 (3%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + + +CL ++ + + + L+S + Sbjct: 84 RKKRGLSIIATLILFICLIVLIASIVIPNLISSLISLISNTSAFLTSVFNNIDDI----F 139 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---I 172 + + ++++ + L + + +D + R A ++ + + I Sbjct: 140 IYFNIDFRMENIASVKDLINMPWQDMVGQALDILTRSAGGIMNNATNFLSTFGVVFTGFI 199 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + + +QL L + +V + G + A ++ Sbjct: 200 FSLYLLGNKETFLRQLRKAIGALCGYKVTCVIFDYAHKTNEVFSNFISGQLVEACILWVL 259 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 L P + I +I + +P PI+ V L++ + A ++ I Sbjct: 260 YYVTMKLFNFPYPELIATIISIFSFVPFFGPIAAMFVGAVLILSKDALMAIWFMVYFQIL 319 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + D + P +VG + LP + + G+ G+ I A + + E I Sbjct: 320 SQLEDNFIYPRVVGNSVGLPGIWVLLSIFVFGDLFGVFGMVIAVPSAACLYSLASEVI 377 >gi|257465432|ref|ZP_05629803.1| putative permease perM-like protein [Actinobacillus minor 202] gi|257451092|gb|EEV25135.1| putative permease perM-like protein [Actinobacillus minor 202] Length = 350 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 106/338 (31%), Gaps = 11/338 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +PQ I I+ +YF G P+L A+++ + K ++ Sbjct: 14 NDPQTIALLGILLFGFGIIYFFSGLIMPLLIAIVLAYLLESPIRFLTEKLHFPRLLSVLL 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L+ + + + + + W+ +P + Sbjct: 74 VFGGSISIVAFLLVVMVPSLWNQAVNFIRDLPNMFNL---LNEWVQALPEHYPGLVDYAM 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 SLK + ++ + S G+ + + ++ FF +D Sbjct: 131 LDGLMSSLKTKILGYGESLLAISVNSIISLVGLGVYAFLVPLMV-----FFLLKDKPIFL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + I S G + + G+V + + L Sbjct: 186 RSFIKMMPK-NRRLATRVWIEMQGQIASYIRGKFLEILIVGIVTYIILIFFDLRYPLLLS 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V+ + ++P GA I V++ L + + L + ++D + PFL Sbjct: 245 VVVGLSVLVPYIGAVIVTIPVALIALFQFGLSPDFYYLLLAFVISQLLDGNLVVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 305 AVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|255528013|ref|ZP_05394850.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|255508282|gb|EET84685.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] Length = 264 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%) Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +SI + I ++F DG +I+ +L + KKIS+ + K++ + Sbjct: 73 NIGQNIVSIAVIPIISYYFLADGDNIANKLLNFFPINSRNMVKKISKDIDKILGRYIVSQ 132 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 ++ G+V + + + L ++ A +IP P+ +I++ + + A Sbjct: 133 LLLCAFIGIVTFAILIFLHIDFPIILSILNAFFNIIPYFGPVFGAVPAIFIALIKSPQKA 192 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + +W + I L P + G + + L LV G + G LG+ + + +I Sbjct: 193 MWVLIWLYLLQQIEGNILSPKITGDSVNMHPLMVIILLVVGGKIAGFLGMILAIPVGVMI 252 Query: 339 AVIWKE 344 VI+++ Sbjct: 253 KVIYED 258 >gi|254038642|ref|ZP_04872698.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300930985|ref|ZP_07146343.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300946776|ref|ZP_07161021.1| permease, PerM family [Escherichia coli MS 116-1] gi|300956810|ref|ZP_07169076.1| hypothetical protein HMPREF9547_02618 [Escherichia coli MS 175-1] gi|301645918|ref|ZP_07245831.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|331644174|ref|ZP_08345303.1| conserved hypothetical protein [Escherichia coli H736] gi|331655057|ref|ZP_08356056.1| conserved hypothetical protein [Escherichia coli M718] gi|912460|gb|AAB18449.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655] gi|226839148|gb|EEH71171.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300316394|gb|EFJ66178.1| hypothetical protein HMPREF9547_02618 [Escherichia coli MS 175-1] gi|300453570|gb|EFK17190.1| permease, PerM family [Escherichia coli MS 116-1] gi|300461163|gb|EFK24656.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|301075827|gb|EFK90633.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|331036468|gb|EGI08694.1| conserved hypothetical protein [Escherichia coli H736] gi|331047072|gb|EGI19150.1| conserved hypothetical protein [Escherichia coli M718] Length = 376 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|283797416|ref|ZP_06346569.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] gi|291074773|gb|EFE12137.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] Length = 379 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 116/334 (34%), Gaps = 8/334 (2%) Query: 16 IMFIILVSLY--FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I LV + L GFF P + +I + P+ + + + V V+ L Sbjct: 18 LTGIYLVCFWGPKLLGFFIPFVIGWVIALIANPLVRFLERRMRIVRKHGSALIIVGVLAL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+ L + E+++ + + ++ + + GG L + + Sbjct: 78 IILLLYLVIGKLYTELRDFIGALPALYENAALEIQGALE-NGGRLFEFLPDEFQETVARV 136 Query: 134 KILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +++ A + ++ + I++ + F + + + + Sbjct: 137 TENLGSYMGQIVSKAAAPTVEIAGNVAKGIPNALVNTVITILSAYIFIAEQDRMMEWMRG 196 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + Y + + +I FL I +L + V + L V+ AI Sbjct: 197 ILPEFILRYIAYLKKDAKGLIGGYFLAQFRIMFVVAAILAVGFLFLHVSYGLVLAVLIAI 256 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G + + L G+ A L + + + + ++P +VG + LP Sbjct: 257 LDFLPVFGTGTALFPWAAVKLFTGDYGYAAGLLILYVVTQ-VARQLIQPKIVGDSMGLPP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L T L G + GL G+ + + + +K Sbjct: 316 LMTLLLLYLGFKVKGLAGMILAVPIGLIFINFYK 349 >gi|160915706|ref|ZP_02077914.1| hypothetical protein EUBDOL_01715 [Eubacterium dolichum DSM 3991] gi|158432182|gb|EDP10471.1| hypothetical protein EUBDOL_01715 [Eubacterium dolichum DSM 3991] Length = 347 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 118/332 (35%), Gaps = 7/332 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ ++ V Y++ F P L I + PI F + C Sbjct: 19 ILALLYVLFYYVIPLFLPFLIGFAIAYILRPIVFRFTQ--GNHIRLYSTALLFLFYCFLA 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP--QSL 133 + L + G+L +++L+ ++ Q I SD+ + EL + H L Sbjct: 77 LLLFIVALKGILLLQDLMEQLPAFYQQYIAPYLAQSDLQVSNLSKELPFADILHSLLIQL 136 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +FL F+ S+ + + ++ I++ FF D I+ + S Sbjct: 137 QQSLASFLSKLTSSFLYTI-SKLMLSLPNILFAMFLSIVSSFFINADYQGITTAITSKLP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + S++V ++ I+ + L L L V + A+ M Sbjct: 196 KAWRIKLLRTSKLVKTTLKQMAKAYGILLLCTFLQLWLGLVLLKVHKAALIAFGIALFDM 255 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + I G+ A L L + + I+ L P ++ + T Sbjct: 256 LPILGCGGILLPWAFVSYIAGSTKLAVGLLL-LNLIIGIIRSILEPKILSSKLGQHPFVT 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G + G+ G+ + P + LI + +E Sbjct: 315 LIAMYVGGKLFGICGMLLAPFVCMLIQKLQQE 346 >gi|297250462|ref|ZP_06864359.2| acetyltransferase, GNAT family [Neisseria polysaccharea ATCC 43768] gi|296838854|gb|EFH22792.1| acetyltransferase, GNAT family [Neisseria polysaccharea ATCC 43768] Length = 366 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 120/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +++ + L AP A ++ + P+ KK + ++ + + L Sbjct: 27 VFLTVLIWLAFILGDTLAPFAVAAVLAYVLDPLVEWL-QKKGFNRAVASMTVMIFALLLL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL + + + +VS++ L G + ++ Q+ Sbjct: 86 AALLLIIVPMLVGQFNSMVSRLPQLAGFMQNTLLPLLKETVGNYVEIDQASVIAWLQAHT 145 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 LK + R +S + L + + L D S + L Sbjct: 146 GELSNTLK-AWFPVLMRQSSNIVSSIGNLMLLPLLLYYFL----LDWQRWSCGISKLVPR 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 201 RFADTYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFV 260 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ + L +W + F+ + P +VG I L Sbjct: 261 PYLGAFTGLLLATVAALLQFASWNGILAVWVVFAVGQFLESFFITPKIVGDRIGLSPFWV 320 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 321 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 357 >gi|261364622|ref|ZP_05977505.1| acetyltransferase, GNAT family [Neisseria mucosa ATCC 25996] gi|288567211|gb|EFC88771.1| acetyltransferase, GNAT family [Neisseria mucosa ATCC 25996] Length = 356 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 140/342 (40%), Gaps = 10/342 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ + LY L P + A ++ + P+ K+ + + ++I V Sbjct: 13 IIMGCVIAAFVWLLYALGDILTPFIVAAVLAYVLNPLVEWLQKKRIKRAP-ASMIVMVLA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + +L + + + +VS++ + + + WL++ A + Sbjct: 72 LLLLLSLMLIIVPMLINQFNNMVSRIPQIVDFTQNKLLPWLNN-----AAGDYMQIDQES 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L ++P + G + ++I + + L++F D S + Sbjct: 127 VIAWLQSHTGELSNTLKAWMPTLMRQSGNVISGMS-NLILLPLLLYYFLLDWKRWSYGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L F + +I+ + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 ALVPRRFIDTYTRITSNMDEVLGEFLRGQLMVMLIMGLVYGVGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP GA ++ L++ + +N + + AI F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATVAALLQFSTWNGLIMVWVVFAIGQFLESFIVTPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + A Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVNAY 347 >gi|254476754|ref|ZP_05090140.1| membrane protein [Ruegeria sp. R11] gi|214030997|gb|EEB71832.1| membrane protein [Ruegeria sp. R11] Length = 355 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 123/356 (34%), Gaps = 19/356 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + W I ++ + + L P + I + PI S T Sbjct: 2 ALPAQKQLKYWGIAAVVFAVVMWALGDVLLPFVLGAAIAYLIDPIADRLEDA-GLSRTAA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 TV+ + LF+V LL + + +M +L + A + +A + Sbjct: 61 TATITVAAVLLFVVMLLVVVPTLIYQMMDLARVLPEAFNNL------------REFAQQH 108 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRD 180 + + +T I G ++ + + + + + D Sbjct: 109 APSLFDEGSRAQQTIVSIAQTLQSKAIAVLEGVVGSAVSLVNVMVLFVIVPVVAVYLLLD 168 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++D L + ++ + KV+ S GM + + G A + G+ Sbjct: 169 WDRMVARIDELLPRDHAPTIRHLAGRIDKVLASFIRGMGTVCLILGTYYAVALMVVGLNF 228 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLR 297 +A+G I ++ IP + A++I L + G+ ++ + I + L Sbjct: 229 GLAVGFIAGLVTFIPYLGALIGGALAIGLALFQFWGDWWSIGMVAGVFVIGQVVEGNFLT 288 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P LVG + L + L G +G+ I + A + VI + + +++ Sbjct: 289 PKLVGNSVGLHPVWLLLALSVFGALFGFVGMLIAVPVAAALGVIARFLVEQYLDSR 344 >gi|319901043|ref|YP_004160771.1| hypothetical protein Bache_1175 [Bacteroides helcogenes P 36-108] gi|319416074|gb|ADV43185.1| protein of unknown function UPF0118 [Bacteroides helcogenes P 36-108] Length = 374 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 122/343 (35%), Gaps = 17/343 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L P A +I + +P+ + F K + + +++ + + +L M Sbjct: 31 LSSVLLPFFIAWLIAYLIYPLVTFFQYKLKLKNRIISIFCALFTLLAIGGTAFYLLVPPM 90 Query: 87 LE----MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ +K+L ++ + VPR LS+ + + L L + ET K Sbjct: 91 IQEFGRVKDLFTEYFSNGIYNSNVPRTLSEFLKENIDMQFLNQLLKEENLLDAIKETLPK 150 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + S + + + ++ +F D SIS+ L + + Sbjct: 151 ------LWSLLSESVNLLFSFFTFFLILLYIVFILL-DYESISEGWTHLVPQKYRPFVVG 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + F G +A+ G++ + + P + LG+ I+ M+P I F Sbjct: 204 LLNDVKDGMNKYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGILNMVPYLQVIGF 263 Query: 263 TAVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + ++ G F AI I D + P ++G L L Sbjct: 264 IPTIVLAIVKAADTGGNFWIIIASATAVFAIVQAIQDGFIVPRVMGKITGLNPAIILLSL 323 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 MG+LG+ I L L+ ++ I+ + E +S+ Sbjct: 324 SVWGSLMGMLGMIIALPLTTLMLSYYQRFIINRENISEAKTSD 366 >gi|289434703|ref|YP_003464575.1| hypothetical protein lse_1338 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170947|emb|CBH27489.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 344 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 109/357 (30%), Gaps = 25/357 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R+ + ++ LY L+ +L I + + + + + + ++ Sbjct: 8 LQNKSVKRFGVFLLLAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + ++ + ++ +LV+ Sbjct: 68 LYVVIATVIVLVFVKYIPVLGDQVNQLVNFANKFFTT---------------------DS 106 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L+ F + + +++ ++ FF + Sbjct: 107 NNDFINYIINLANQFDIMKYTEQGVTMLLTYLTNVGTVLMNVFIALMLSLFFSLGKDHLV 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIGFIYEEAKFFGSKFVGTFGKVIEAQFIIALVNAILTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILIVVMIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G ++ + + E S Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTGQEEIEQPNNNSH 343 >gi|225075831|ref|ZP_03719030.1| hypothetical protein NEIFLAOT_00847 [Neisseria flavescens NRL30031/H210] gi|224952777|gb|EEG33986.1| hypothetical protein NEIFLAOT_00847 [Neisseria flavescens NRL30031/H210] Length = 356 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 124/337 (36%), Gaps = 10/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ + LY L P + A ++ + P+ K ++I Sbjct: 13 IIMACVVAAFIWFLYALGDVLTPFIVAAVLAYVLNPLVEWL-QLKRIRRAPASMIIMALA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ + + WL+ I G + Sbjct: 72 LLILLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKLLPWLNSISG-----DYIQIDQES 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L +IP + G + +++ + + L++F D S + Sbjct: 127 IIAWLQSHTDELSNTLKAWIPTLMRQSG-NVISGVSNLVLLPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKL 307 I+ IP + ++ + L +W + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATVAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ G L A+ V+ +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|229172646|ref|ZP_04300205.1| UPF0118 membrane protein [Bacillus cereus MM3] gi|228611117|gb|EEK68380.1| UPF0118 membrane protein [Bacillus cereus MM3] Length = 337 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVTFIGATLYKYLPVLTIQISQLIYQFRLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIS 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSNLKVFYEEITYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|210631055|ref|ZP_03296736.1| hypothetical protein COLSTE_00621 [Collinsella stercoris DSM 13279] gi|210160194|gb|EEA91165.1| hypothetical protein COLSTE_00621 [Collinsella stercoris DSM 13279] Length = 379 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 115/348 (33%), Gaps = 14/348 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLAVIATVSV 70 +++ + ++ + A ++ + I S+ Sbjct: 28 VVLGALSAAVDIFFPVLLGLGFAFVLNVPVSGMERLLHRAVGLVPEGRRPGEGAITMASI 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD------IPGGMWASELWT 124 + + I + + EL++ + + + A Sbjct: 88 VLVLIAIAGVAVLGVTMLVPELIASARTVAPLLAERLPEIEESLVANGVDVEKLAQFFQG 147 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S + L G+ I + S +F + + ++ Sbjct: 148 AGASSATAAAGSGAQGLLNLGLGSIASSVFAAARSTVSVLSSSVFAFVIAVYVLASKRTL 207 Query: 185 SQQLDSLGE-HLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +Q++ + + HL P + +I + G + A G ++ A+ L +P Sbjct: 208 GRQVNRVMDAHLAPGHAARIRHVASLATDTYSKFLSGQCLEACILGTLIFLAFSLFRLPY 267 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +G +TA+ A +P + A+ +L + + +A + FI ++ + P + Sbjct: 268 AGLIGFLTALFAFVPYVGAFASCAIGAFLTLLASPEHAPLCVIVYLAVQFIENQFIYPHV 327 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 VG + L L T + G + G++G+ ++A++ ++++ A Sbjct: 328 VGSSVGLSALWTLIAALVGGKLFGIVGIVFFIPIVAVLYELFRQWTNA 375 >gi|170766882|ref|ZP_02901335.1| putative membrane protein [Escherichia albertii TW07627] gi|170124320|gb|EDS93251.1| putative membrane protein [Escherichia albertii TW07627] Length = 349 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + IA V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIILNPLVNWFIRRGVRRP-----IAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + NQ L +I + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNQELTRKLFKLQEILPFL------------- 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 116 -NLHMSPEKLLQRMDSEKLVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA +S I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVLSAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLIWGWLLGPVGMLL 313 >gi|317125541|ref|YP_004099653.1| hypothetical protein Intca_2419 [Intrasporangium calvum DSM 43043] gi|315589629|gb|ADU48926.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 427 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 90/285 (31%), Gaps = 11/285 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ +L + P+ + I + ++ +F + + + E Sbjct: 116 ITLLVVSLFLTLALNPLVEGLTRQ-NMRRGLAVTIVFLGLLGVFTLLGMVVVPPVASEGT 174 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L PR L D+ W ++ ++ + + ++ N I Sbjct: 175 DLADNA----------PRMLDDLLRQPWVQDVDHRYQVVQRIQEEINHRIADGNLWAGIF 224 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G I SI+ +++ +F S+ Q +L + ++ + + Sbjct: 225 GGVLGAGRIIAAGVFSILTVLVLTLYFLASLPSVKQAGYALVPASRRPRFISLAEEIMRR 284 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S +G +A L +P L V ++ +IP +V + Sbjct: 285 VGSYAIGQVAVAATNAFFAWIMMSLLDLPFAAVLAVAVGLLGLIPMIGATLGASVVALVA 344 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 A + ++ I + + + P ++ + +P T Sbjct: 345 FFDEPKKALVVIIYFVIYQQLENYAVMPRIMQRTVAVPGALTVVA 389 >gi|170759215|ref|YP_001787883.1| hypothetical protein CLK_1950 [Clostridium botulinum A3 str. Loch Maree] gi|169406204|gb|ACA54615.1| putative membrane protein [Clostridium botulinum A3 str. Loch Maree] Length = 342 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 119/319 (37%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ F+ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFFISFVIYYVLKPIHT-FLKHKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V + ++ I + + E + + G Sbjct: 90 IKEGYNITSSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIG 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F FG LDY + + I +++F G I Q+ + K + Sbjct: 143 ENILNKFVG-FGENILDYAV----IPIIVYYFLAAGDKIIQKFFIIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMILAIPIGVIMKIIYED 336 >gi|146293482|ref|YP_001183906.1| hypothetical protein Sputcn32_2386 [Shewanella putrefaciens CN-32] gi|145565172|gb|ABP76107.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] Length = 368 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 107/328 (32%), Gaps = 23/328 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + IIL + P + + I P + +LAVI + + L Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFIAMICNPAIGLMTKYRV--PKWLAVILLMCFIVLMG 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + + E + + + W H ++ I Sbjct: 77 LWLASVVGSSINEFSKQLPQYRDQLIEQFS-----------------WIIHKLQALNIHI 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L + + ++ +++ + F + S+ ++L L Sbjct: 120 SKDQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIVLTIVFMLFEAQSLPKKL-HLALDD 178 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++I R + V + L ++++ GL++G GV + VI + IP Sbjct: 179 PDMRLQQIDRFLQSVNQYMVLKT-LVSLATGLIVGIGLTFIGVDYALLWAVIAFLFNYIP 237 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A L ++ + P +G + L L F Sbjct: 238 NIGSIIAAIPAVLLAFIQLGPTAAGGTALLYIGANMVMGNVIEPKFMGRGLGLSTLVVFL 297 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ M + + Sbjct: 298 SLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|307151710|ref|YP_003887094.1| hypothetical protein Cyan7822_1833 [Cyanothece sp. PCC 7822] gi|306981938|gb|ADN13819.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 362 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 108/335 (32%), Gaps = 22/335 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 II+ + A +I P+ I K+ +LA++ T+ ++ + Sbjct: 20 FVIIVAGMQAAASILNSFFLASLIAIAITPLLHWLIRKRL--PGWLALLMTILIVICAGL 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ + E+ + +P + + I AS+ S + Sbjct: 78 FLVAFLGISISELIHI-------------LPTYEAKIQALKDASKATLAARGIDTSQLLS 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E F I + F L ++ + F + S+++ Sbjct: 125 LEIFSPARIIGTVAGFLRTITEALSTSLL----LVFLIAFMLIEASGFSEKIQRNITSSG 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + IR+ G+V G+ GV+ ++ IP Sbjct: 181 VLLAR--FNAFNRDIRNYVFITAWTGALTGVVDFFILLFLGIDLAALWGVLFFLLNFIPA 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G ++ + L++ I A +F + + IVDK ++P + + L L Sbjct: 239 VGFILAVLPPMLLALLEFGIEKALLVFFFCWLIDNIVDKGIKPRYMQQGLDLSPLIIILS 298 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ +G +G + L ++ + ES + Sbjct: 299 VIFWSWVLGGMGAILAVPLTLMVKKVILESSEDTR 333 >gi|296190529|ref|XP_002743228.1| PREDICTED: transmembrane protein C9orf5-like [Callithrix jacchus] Length = 880 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 650 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 709 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 710 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 769 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 770 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 826 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 827 GPILLCILVV 836 >gi|323524830|ref|YP_004226983.1| hypothetical protein BC1001_0461 [Burkholderia sp. CCGE1001] gi|323381832|gb|ADX53923.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 358 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 133/351 (37%), Gaps = 9/351 (2%) Query: 5 MLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + W+ + + + + L+ L P L I+ + P + + ++ + Sbjct: 9 TPVQRRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWLVRRRVPRALAAL 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + + ++ +L +F E +L +V + H + + G + + Sbjct: 69 LMMLLFTLLMTLL-VLLVFAVIQKEGPQLRQQVPVLFAHINAWLQPKLALLGLADSLDFA 127 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L+ ++T + + G + + ++I + + LF+ D Sbjct: 128 SVRDLVMGQLEGSAQTVARYAWTSIVTS-----GNVMMTVIGNLILVPLVLFYLLYDWNR 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ + +++R + +++ G ++ + A LAG + Sbjct: 183 MLLRAQAVVPRRWLVKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAVALTLAGFEIALP 242 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G+ T + IP G A A+ LL GN + + + + + L P LV Sbjct: 243 VGIFTGLAVFIPYVGFATGLALALLAALLQFGNWYGFGAVAVIYGVGQIVESFFLTPRLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G I L L F L+ + G G+ + + A+++V +E + E+ Sbjct: 303 GERIGLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAVRELRQSYLES 353 >gi|238927813|ref|ZP_04659573.1| possible permease [Selenomonas flueggei ATCC 43531] gi|238884360|gb|EEQ47998.1| possible permease [Selenomonas flueggei ATCC 43531] Length = 342 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 119/341 (34%), Gaps = 18/341 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ +L S +F + F V +L++ P+ + ++ A Sbjct: 9 SIILAIVFAALLSSFWFFQDFAFIVFLSLLLQLLLQPVVDAMEQRRIPRGIASA------ 62 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + LV VL+ + R+++++P + Sbjct: 63 ------------GAILLFLLLVLVLLSVLSRSVVPSLQRFVTELPSIGQGLQQMPLLTEM 110 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ S + + R + F + + + + +I F+ +DG +I + L Sbjct: 111 DLQQEMESFLDKLRSVGAELLRASLSFLLAAVGKIMDFVIIIFVSFYLLKDGKTIKRWLA 170 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + +R ++ I GL++ + L G+P +++ Sbjct: 171 GLFPYGSRGRVLNLFDRLLHALRIYVCSQLVMCIITGLIVFLYFVLMGLPYGSVFALLSG 230 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I +P P + +A+ + L+ I + P LVG + L Sbjct: 231 ISEFVPVLGPTAASALGTIMTASAAHDLTVQTALFYLALTQINHNIVYPALVGKSLHLHP 290 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G+V G +G G+F+ M ++ ++ + K Sbjct: 291 VAVILGVVFGGEILGAAGMFLAVPFMVIVKIVVTDIYHEQK 331 >gi|322434917|ref|YP_004217129.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX9] gi|321162644|gb|ADW68349.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX9] Length = 360 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 111/340 (32%), Gaps = 13/340 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + M ++ V Y L + A + P+ + S +A + + Sbjct: 34 IVFFFAMILLFVLGYKLLKELEILYVAALFAVVLMPMVIWITERSIRSYKPSRPVAIILL 93 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +V L F + + + +L+D+P + + K L Sbjct: 94 LLSAVVFLGLFFTIAVPPVLT-------------DLRNFLADLPARIPGAVAHLKKLPLA 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + +L + ++ + +F +G S Sbjct: 141 DKIGVDQIAAKAEAVAGATGSYIFSALPNWLSHVFDLLTALFLCIYFMLEGEHAYNFFLS 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + G ++ + G+ + + V + LGV+ + Sbjct: 201 IVPLNSRRRLDVTLKKAELKMSKWLFGQGLLMLILGVTSTIVFGVLHVRYFILLGVLMGL 260 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +IP + ++ + + +F++ AI I + L P ++ + L L Sbjct: 261 LNIIPIAGGVVTILLAAGVAALDSWTKMAGVFIFYAIYANIENAFLTPRIMKSSVDLMGL 320 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G G++G + ALIAV+ +E + Sbjct: 321 TVLVALLLGTALAGIVGALVAVPTAALIAVLLEEYAVQRP 360 >gi|293347382|ref|XP_001059736.2| PREDICTED: hypothetical protein [Rattus norvegicus] gi|293359269|ref|XP_216388.4| PREDICTED: hypothetical protein [Rattus norvegicus] Length = 880 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 650 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 709 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 710 GVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 769 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 770 TQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 826 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 827 GPILLCILVV 836 >gi|170718389|ref|YP_001783612.1| hypothetical protein HSM_0261 [Haemophilus somnus 2336] gi|168826518|gb|ACA31889.1| protein of unknown function UPF0118 [Haemophilus somnus 2336] Length = 350 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 114/335 (34%), Gaps = 19/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + +IL + P L +L I P+ + +K +LA+ Sbjct: 10 QVLVACAAIIVILGGIKLASEIVVPFLLSLFIAIICSPVVNFMTKRKIPH--WLAITLLF 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + L L + E + + + + ++L Sbjct: 68 VLIVVLFYFLASLISNTVQEFTQSIPQYK---------------VLLSQRLNDLLAFAHH 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L +++ I +F SRF + F + +I + + + F + ++ Q+ Sbjct: 113 FNIPLFFSTDSINDDFDPSIIMKFVSRFLLSFSNVVTNIFVLFLIVVFMLAEAPTVKQKF 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + + TI ++ GL + + + + + Sbjct: 173 TKLIVTENTVTQQNYIERILQGVIGYLGVKTITSVMTGLCIYFVLSVLDIQYAILWATLV 232 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP G+ I+ V + + + + + +V L P ++G + L Sbjct: 233 FLLNYIPNIGSIIAAVPVIVQSFLLNGFITGLVVSIAFILINTVVGNVLEPKMMGRKLGL 292 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L F L+ +G +G+ + P+ M L + Sbjct: 293 STLIVFLSLLFWGWLLGTVGMLLSVPLTMGLKIAL 327 >gi|254302758|ref|ZP_04970116.1| possible MFS superfamily major facilitator transporter macrolide symporter [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322950|gb|EDK88200.1| possible MFS superfamily major facilitator transporter macrolide symporter [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 363 Score = 70.6 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 124/329 (37%), Gaps = 8/329 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +F V+ ++ I PI K + + ++ V+ +F++ L + + + Sbjct: 39 YFMTVIMSIFIAILLEPIAKYLKKKSKINDILAISLSITLVVLVFVILSLMIIPEIVSSI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 KEL ++ + + + + D + +++T ++ S T D + Sbjct: 99 KELNGIYPYLSEKAMAIGKKVVD---YLAKKDIYTIDINKIDSYFTNFIKNNITGIQDIV 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKISR 205 S + + ++ + F D + + L+++ +F Y K + Sbjct: 156 STIISGLIDWTIGFT-NLFLAFVLAFLILLDKKHLIKTLENIIIIIFGVKNTPYVIKKLK 214 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G I++ GL + + G P ++ + MIP I + Sbjct: 215 LSKDIFLSYVSGKLIVSAIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIIGGII 274 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +L++ L + I + + P ++G + L ++ GL Sbjct: 275 AFFLILLVAPIKTIILLIAIIISQLVDGFIVGPKIIGDKVGLNTFWVMVSMIIFGNLFGL 334 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+F+G ++++I + + + + A + ++ Sbjct: 335 VGMFLGTPILSIIRLFYIDLLKAKQGGEQ 363 >gi|25325134|pir||C91169 hypothetical protein ECs4323 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) gi|13363797|dbj|BAB37746.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209755908|gb|ACI76266.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755910|gb|ACI76267.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755912|gb|ACI76268.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755914|gb|ACI76269.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755916|gb|ACI76270.1| hypothetical protein ECs4323 [Escherichia coli] Length = 376 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|226314195|ref|YP_002774091.1| hypothetical protein BBR47_46100 [Brevibacillus brevis NBRC 100599] gi|226097145|dbj|BAH45587.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 353 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 106/358 (29%), Gaps = 33/358 (9%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----SSTF 61 L + R+ I+ + + LY L VL ++ + ++ + Sbjct: 8 LQKPDVRRFGILALFCLLLYSLGSMLNMVLLTFLVTYLMNRLHQYLTRVTHKVVPIHPKL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + +V + + + +L + Sbjct: 68 ILIFLYMLLTFFLVVGGMKAIPALIHQTGQLFHSIEEVY--------------------- 106 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 H + + + + I + + F + + ++ II FF Sbjct: 107 ----HQNQNNEFAPYLMSVVGKLDMKGIVQGSLDFLAVVRNVGFNVFLAIILSLFFLLGK 162 Query: 182 FSIS---QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ Q + S+ +IA+ W+ G Sbjct: 163 DNVVTFTAQFRTSKLSWLYNEIAYFSQKFILTFGKVIETQLLIALFNTTFTVIGLWIMGF 222 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P+ + L ++ I+ +IP G IS +S G I L ++ + + L Sbjct: 223 PNLLGLAIMVFILGLIPVAGVAISLIPLSAIAFSVGGIPTVVYLLIFIMVVHALEAYVLN 282 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L+ LP TF L+ G+ GL +G + I + M K K Sbjct: 283 PRLMATKTHLPIFYTFIVLIFSEHFFGVWGLIVGIPSFVFLLDILEVKKMEQPPTKNK 340 >gi|319947927|ref|ZP_08022109.1| hypothetical protein ES5_01331 [Dietzia cinnamea P4] gi|319438416|gb|EFV93354.1| hypothetical protein ES5_01331 [Dietzia cinnamea P4] Length = 363 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 107/316 (33%), Gaps = 17/316 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 AP+ A+++ P+ + ++ L V+ V + +L ++ Sbjct: 51 IAPLAIAVLLAAMLRPMVDRIPERVPRAAAALVVVVGVLAV------ILAALAAVTTQLA 104 Query: 91 ELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 V ++ G RWL D P + A L ++ SE + Sbjct: 105 TGVPRMRDQISSGTDAALRWLEDGPLHLTADRLQEAVAQARTWIESNSEA---------V 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A +FG +D ++ +++LFFF G + + + R Sbjct: 156 AAGAVQFGHTAVDAVAGVLICLVSLFFFLYHGEKLWEFFVRWLPRASREHVDTAFRGGWG 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + + +A +G L VP + + V+ + + +P G ++ ++ Sbjct: 216 SLGAYTRTQLTVAAINAAGVGLGALLLRVPFVIPIVVVVFLASFVPIVGTLVAGVIPTVL 275 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ A + + + L+P L+G + L L + G G++G Sbjct: 276 ALVERGPAIAVAMLAIVVVVHQVESHVLQPLLMGHAVALHPLAVILVVTAGTYLFGVVGA 335 Query: 329 FIGPVLMALIAVIWKE 344 + A+ + + Sbjct: 336 LFAVPVTAMANTVVRH 351 >gi|149195244|ref|ZP_01872333.1| hypothetical protein CMTB2_00079 [Caminibacter mediatlanticus TB-2] gi|149134586|gb|EDM23073.1| hypothetical protein CMTB2_00079 [Caminibacter mediatlanticus TB-2] Length = 335 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%) Query: 186 QQLDSLGEHLFPAYWKKISRIV---PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++ + + P +K+ ++ +V+ F + A EG++ G L G+ Sbjct: 159 REILEYFKKVIPLENEKLEKLFFNTSEVMSVVFYSTLLTAFLEGVLFGFIVSLYGLDF-F 217 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFL 300 ++ A ++IP G + + VS++L GNI A + + I D ++PF+ Sbjct: 218 FFSIMYAFASLIPIVGGIMMWGPVSLFLYANGNIQGAIVVAIYSIIVISIIADTFIKPFI 277 Query: 301 VG-------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +L + FF +V G+ + GL G+ IGP + +L I + Sbjct: 278 IDFVKKIVESDTELNSMLIFFSIVAGLSSFGLWGIIIGPAITSLFISILQ 327 >gi|320103229|ref|YP_004178820.1| hypothetical protein Isop_1687 [Isosphaera pallida ATCC 43644] gi|319750511|gb|ADV62271.1| protein of unknown function UPF0118 [Isosphaera pallida ATCC 43644] Length = 376 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 117/330 (35%), Gaps = 21/330 (6%) Query: 17 MFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +++ S+Y L+ F + ++A+ + + PI K T+LA+ T+S + L Sbjct: 47 LIVLVASVYLLREFAGLIQQIVTAVFLTYLLNPIRQWLTDK--GLPTWLAITVTLSGLGL 104 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+ L + G+ ++ + + + + +PG + ++ Sbjct: 105 TILMLAAVLQVGLADLSTKMPQYLGILNDKLQRWSESERLPGAIR---------EGLAAM 155 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L+ N + R A G + + ++ +I F + + +++D Sbjct: 156 LADDRPLLERNLG--LVRSALETGFKLVSNAVVVVIYLI---FLMAESGGLRRRIDEAMT 210 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +++ + + + T ++ G+ + + G++ + Sbjct: 211 PERASETRRVLSEINQAVSGYLWVKTFVSAIVGVATTLTAHWYQLDDPLVWGMLAFFLNF 270 Query: 254 IPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + + L+ A + L + +V + P L G + L Sbjct: 271 VPYLGSLVAIVLPTMLALIKFDTTGPAIQIALILFVVHNVVGYVVEPILTGRRLDLSPSL 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G +G+ + LM++I +I Sbjct: 331 VIISLGFWAWVWGPVGMVLAVPLMSVIKII 360 >gi|225166062|ref|ZP_03727803.1| protein of unknown function UPF0118 [Opitutaceae bacterium TAV2] gi|224799696|gb|EEG18184.1| protein of unknown function UPF0118 [Opitutaceae bacterium TAV2] Length = 419 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 124/362 (34%), Gaps = 17/362 (4%) Query: 15 MIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + + + ++ F P+ A I+ P+ S+ V + Sbjct: 52 LLAGVGITLSFVVRHFSSVLWPLAVAGILALILRPVVEFLESRLRFRRPIAVVALYAVFV 111 Query: 72 CLFIVPLLFLFYYGMLEMKELVS-----KVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 L LL + + ++ E +S P+WL + M ++ Sbjct: 112 LLVAAGLLVIIPPVVKQLIEFLSALPGLWEKAVAYVQEHSPQWLGMVHDKMANAKFQEIV 171 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGM-IFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +K + + + ++ G+ F + + + I LFFF + Sbjct: 172 QNLVSHVKTAAAEAVPSVESVVPSLKSAGIGVLGFFGFVTHLAIVPIYLFFFLLSRREPT 231 Query: 186 QQLDSLGEHLFPAYWKKISRIVP---KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L S L P + ++ +I S F G +I + G++L + + G+ + Sbjct: 232 RGLGSQLPFLKPGVRDDVVFLINEFIAIIISFFRGQLLIGLIMGVLLALGFSIIGLKFGL 291 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI----KGNIFNATCLFLWGAIELFIVDKTLRP 298 +G+ I+ ++P I +V++ L + G + + + + I L P Sbjct: 292 FIGLALGILNIVPYLGTILGLSVALPLALLQPDGGGVQLLVLVLVVFCVVQMIEGWFLTP 351 Query: 299 FLVGGPIKLPFLPTFFGLVG-GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G L + + G +LG+ + L A W+ + + Sbjct: 352 KIMGDRTGLHPVAIIVAIFFWGTALDSILGMVLAIPLTAFFVTAWRLLKLKYLHRDDHDY 411 Query: 358 SN 359 + Sbjct: 412 HD 413 >gi|118443099|ref|YP_878142.1| hypothetical protein NT01CX_2069 [Clostridium novyi NT] gi|118133555|gb|ABK60599.1| hypothetical protein NT01CX_2069 [Clostridium novyi NT] Length = 367 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 108/341 (31%), Gaps = 9/341 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I+ I+ + L F A I + PI + + + V + VM L Sbjct: 31 FILKILGDIINILTPFIL----AFTIAYVLNPIMKFIEKRLKFNRGTSIVCTYILVMSLI 86 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 V + + +++ + Q S IP + S L + Sbjct: 87 TVFSITIIPKVFNSGIDMIDNIPEFAQKMYSWTS--SHIPSKLIGSG---SILRNNSGKW 141 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I + + + I + +++ +I I L+ + ++ + L + Sbjct: 142 IEKLSIMSSEWISLLLSTIVSTTTSLINFLFGLIISIYMLYDKEKFQDIATKLVYILLKE 201 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + V ++ + I + G++ + P + L +I I MI Sbjct: 202 NKGNKFISFIKTVHTMVGTYIGIKAIDSFIIGIICFIGLMIFKTPYVLILSIIVMITNMI 261 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P + + I + A + ++ + L P LV + + Sbjct: 262 PYFGPFMGMIPPVVINIFYDPKRAIGILVFLILLQQFDAWILEPKLVSTSVGVSPFLVIL 321 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G++G+ + +MA++ + + E Sbjct: 322 GITIFGSVFGVIGMLLASPIMAVLNIYLGKWFRKKVNQYEN 362 >gi|31791383|ref|NP_853876.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121636117|ref|YP_976340.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988590|ref|YP_002643277.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31616968|emb|CAD93075.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121491764|emb|CAL70226.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771703|dbj|BAH24509.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] Length = 367 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 112/330 (33%), Gaps = 19/330 (5%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ ++ L+ L F PVL AL++ P S+ + +S Sbjct: 25 LVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR-GLPRAVAVTLVLLSG 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L F+ + + LV++V + RWL + P + ++ + Sbjct: 84 FAVLGGILTFVVSQFIAGLPHLVTEVERSIDSAR---RWLIEGPAHLRGEQIDNAGNAAI 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++L+ + A + + + ++ L FF G SI Q + Sbjct: 141 EALRNNQAK---------LTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + R + ++A+ + +G+ + GVP + L + Sbjct: 192 AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF 251 Query: 251 MAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A IP + F AV + LL KG I A + L+P ++G + + Sbjct: 252 GAFIPLIGAVVAGFLAVVVALLAKG-IGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIH 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + A Sbjct: 311 PLAVVLAIAAGGVLAGVVGALLAVPTAAFF 340 >gi|218675706|gb|AAI69219.2| hypothetical protein LOC23731 isoform 1 [synthetic construct] Length = 391 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 161 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 220 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 221 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 280 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 281 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 337 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 338 GPILLCILVV 347 >gi|254422589|ref|ZP_05036307.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190078|gb|EDX85042.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 360 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 120/338 (35%), Gaps = 11/338 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ + + + + A ++ F + S I K + ++ +I + + L Sbjct: 22 IFNLWLLFKGVQYFHSLLSIFVVAALLAFLLDYL-VSLIQKTGCARSYSVLIIVLLALSL 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + ++ EL +++ G L +L + L Sbjct: 81 IVLISMTVVPTLLDQLTELTTQLPGWLASGSQQLELLDT-----EIDKLESADNIDISDL 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + +P F + F D I+ + + G Q L Sbjct: 136 TNQLTDLLPVE-LKLLPGQLVSFLLGFTDKLFDIVLTTVLTLYLLLYGKPFWQGLYKWLP 194 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +++S + + F G +IA G+ L +++ VP + G+ + Sbjct: 195 N---DLGEQLSAALSVQFENYFFGQAVIAALMGVTLALVFYILQVPFWLVSGLGIGVCVF 251 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP G + VS+ L+ G+ T + I ++D P ++G + L + Sbjct: 252 IPFGDWLGMATVSL-LVGIGDPLLGTEVLAACIITDQVIDNVFTPRILGDAVGLNPVWVL 310 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G + GLLG I L A I +A E Sbjct: 311 LSLLVGAQVDGLLGAVIAVPLAATFKQIVDSFGIADLE 348 >gi|310640698|ref|YP_003945456.1| protein [Paenibacillus polymyxa SC2] gi|309245648|gb|ADO55215.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 361 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 103/283 (36%), Gaps = 9/283 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P++ + + + PI +K + S ++ ++ L I LLFLF +G+ Sbjct: 42 IVPLMLSFFLYYLLRPIVDVMERRKIKRS------ISILLIYLVIGVLLFLFSWGVW--P 93 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L +V ++ + + L D ++ + L + L + Sbjct: 94 TLRDQVTNLFENAPKLIKSLVDQLSQWRHNQSLRQVLPPGEDPLSQLSDTLNEAFST-LS 152 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ + + + + I L++ ++G ++ + + ++ + Sbjct: 153 DYSVKLVSFVSYFFIVLATFPILLYYMLKEGSKFGPKMLNFFPKKYHKDALEVMEDIDSA 212 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S + +I + GL++ + + G+P + L VI+ + IP ++ + + + Sbjct: 213 LSSFIVSRVLINVALGLMMFLGFLIIGLPYALLLAVISIFLNFIPYVGAVAASIPVVIIG 272 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + A + + I D L P + G + + L Sbjct: 273 FLESPSMALWSLVVVIVAQQIQDNWLSPIVFGKQLDIHPLTVV 315 >gi|77360222|ref|YP_339797.1| integral membrane transport protein [Pseudoalteromonas haloplanktis TAC125] gi|76875133|emb|CAI86354.1| conserved protein of unknown function ; putative integral membrane transport protein [Pseudoalteromonas haloplanktis TAC125] Length = 325 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 101/301 (33%), Gaps = 22/301 (7%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I P+ F + +AVI V ++ V L L + + Sbjct: 12 IIPFILAAFIAIICSPLIKFFARYRI--PKGIAVIFVVLIIVGLGVSLGGLVGQSVNDFS 69 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + L + +W ++ ++ I + L + Sbjct: 70 -----------------QQLPQFKVKLKEEFVWLVDIASQYNILINKDQILSMFDPGKMV 112 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A+ ++ +I+ + F +G S++ ++ S P K Sbjct: 113 DVATNMLTGLGGVMANMFLIILTVVFMLFEGPSLNHKIHSALND--PDKKMKQINRFLDS 170 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I S T++++G G++ S W V V GV+ + IP G+ I+ + Sbjct: 171 INSYLAIKTLVSLGTGILAASLLWFLDVDYFVLWGVLAFMFNYIPNIGSIIAAVPAVLLA 230 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 LI A + + ++ + P +G + L L F L+ +G +G+ Sbjct: 231 LITQGPLVAGLVGAGYLVINTVMGNIVEPKFLGKGLGLSTLVVFLSLIFWGWLLGSVGML 290 Query: 330 I 330 + Sbjct: 291 L 291 >gi|146279175|ref|YP_001169333.1| hypothetical protein Rsph17025_3144 [Rhodobacter sphaeroides ATCC 17025] gi|145557416|gb|ABP72028.1| hypothetical protein Rsph17025_3144 [Rhodobacter sphaeroides ATCC 17025] Length = 393 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 119/336 (35%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++ ++++ LYF + P++ L+I T P+ S + Sbjct: 40 RRLLGFILLVLVIMGLYFARDVILPLMIGLLIALTFSPVVRSL-----HRIGIAPPVTAT 94 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + + + + +S+ + L + + L+ Sbjct: 95 ALIVSLAAVIGIGAFILSGPVSDWISQAPRLGDQLRERAQTLLASFEAVQNASEQVSELA 154 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++T GI S + I ++ F G +L Sbjct: 155 NDAEDPTVQRVAVQTPGI------LSSAVGSVASVLTTTIVTLVLALFLLASGDLFYIKL 208 Query: 189 DSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +I + + + L +TII G G+V+G A W AG+PS + + Sbjct: 209 IEAFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAGLGVVIGLAMWGAGMPSPIIWAIG 268 Query: 248 TAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ +P I + ++ ++ ++ A + I + + P ++G + Sbjct: 269 AFLLNFLPYIGAISGVALSAAVAIVHYDHLSQAFLVPALYLAATAIEGQLVTPIVLGRRL 328 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +L + F ++ G+ G I + + V+ Sbjct: 329 ELNTVSVFVTVIFWGWLWGVPGALIAVPFLVCLKVV 364 >gi|254557801|ref|YP_003064218.1| transport protein [Lactobacillus plantarum JDM1] gi|254046728|gb|ACT63521.1| transport protein [Lactobacillus plantarum JDM1] Length = 348 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 115/333 (34%), Gaps = 17/333 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 29 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A +++ P + W H L + L T GI Sbjct: 89 DQLKVIPDMLAKA----------ITNHPVLNKNIDKWVNQAIHSSELIQNGKALLVT-GI 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 138 KGLSEVGTGFTHVLMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 ++ +I +++ + + G+PS + L +I I+ ++P G IS + Sbjct: 193 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 252 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ G + + + + L P L+ LP TF L+ +G Sbjct: 253 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 312 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL IG +++ I+ + +I+ Sbjct: 313 WGLIIGIPIVSFFLDIFGVQNSEPRRVTSQIAK 345 >gi|260905376|ref|ZP_05913698.1| AI-E2 family membrane protein [Brevibacterium linens BL2] Length = 356 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 95/282 (33%), Gaps = 8/282 (2%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 PI + ++ S +SV+ + + L + +L ++S++ Sbjct: 57 PIVLWLVERRLPRS--------LSVVLVVLAFLAIVAGAVLLIAPAVISQIQQFIGDLPD 108 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + L+ + +T + + L E + + G + + Sbjct: 109 IVASLAATGWVADLEQRFTGAVDLDKIFANLGEWASDPKNVVSLGGGVVSIGAGIISFLA 168 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ ++I +F +I + SL + ++ V + I LG + I Sbjct: 169 GVVIVVILTIYFAVTMPTIKSAMLSLVAASSRPTVESVTEEVTRSIGRYVLGQVSLGIVN 228 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+ + G P L I + ++IP PI+ + + + + ++ Sbjct: 229 GVCSAIFLTIIGAPLPALLAFIAFLASLIPLVGPITGAIIITGSCLMVSPGLGIAVGIYY 288 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + L P ++ + +P + G G+LG Sbjct: 289 LVYMQVEAYLLSPRIMKTAVNVPGALVIIAAIAGGTLGGVLG 330 >gi|326575175|gb|EGE25103.1| hypothetical protein E9W_04228 [Moraxella catarrhalis CO72] Length = 415 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 127/343 (37%), Gaps = 9/343 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI--YSSFISKKEESSTF 61 T I + + ++L+S Y+L + V +++++ + Y + I + Sbjct: 3 TQEQKSFIFMMVAVVLMLLSFYYLIHVWLIVFASILMAVWLLSLVEYLTLIPWVGQYLKK 62 Query: 62 LA--VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 L ++ T+ +M L V +G +L + +L Q + ++L+ A Sbjct: 63 LPHGILLTMVLMGLVGVLSTLAALFGHELALQLENLKLLVPQAFEYMNQYLTQYLQTHPA 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L + L+ + FL + + G + ++ II LF Sbjct: 123 VYEWLAGLEWARELRDNPQQFLTRFSDGAMAYLPTYLGGMVSGMGTLVVITIIGLF-LAI 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + ++ + + + ++ LG ++ G+ G A WL G+P Sbjct: 182 SPSVYRRSFVAMVPKDSRDKAEYLLDRSYRSMQQWLLGQLVVMAFVGIATGIALWLMGIP 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLR 297 +ALG I ++ +P P + + LL+ + L++ I + + + Sbjct: 242 FALALGFIAFLLDFVPVLGP--WLSAIPILLLTLIVSPKMLLWVALMIVVVQQLESYVIS 299 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 P + + LP + V G+LG+ + LM ++ V Sbjct: 300 PIVQNRMVDLPPVALLLSQVIMGSITGILGIALATPLMVMVIV 342 >gi|300916791|ref|ZP_07133498.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300415940|gb|EFJ99250.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 376 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|225872604|ref|YP_002754059.1| hypothetical protein ACP_0952 [Acidobacterium capsulatum ATCC 51196] gi|225791289|gb|ACO31379.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 359 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 91/283 (32%), Gaps = 15/283 (5%) Query: 38 LIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI-VPLLFLFYYGMLEMKELVSKV 96 +I P+ + + + ++ V ++ + +F + ++L V Sbjct: 45 ALIAVVLTPLARAIMRLRIGKWHPGLGLSVVLLIAAVAGLISVFALFALPPAFRDLREFV 104 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q + L +P ++ + Q TFL + D+ Sbjct: 105 TELPQRAPELLTRLKHVPLMQRIDV--SQLNARIQDFAGNFATFLLKSAKDWA------- 155 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 ++ I+ +F DG Q L A + + L Sbjct: 156 -----HVVFAVGMGILLTVYFMIDGSRAYQWGMKLVPVEHRARLDRTLTRAEARMGRWLL 210 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G ++ + G+ + + V ALGV+ + +IP + ++++ + + Sbjct: 211 GQAMLMLILGVCSTVVFVILHVRYAYALGVLMGLFNIIPVVGAMITVSLALVVAALDSWG 270 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++ AI + L P ++ + LP L L+ G Sbjct: 271 RVLGVLVFYAIYAQLETSVLTPRIMQSSVNLPGLAILIALLIG 313 >gi|215425410|ref|ZP_03423329.1| putative transmembrane protein [Mycobacterium tuberculosis T92] gi|219556003|ref|ZP_03535079.1| putative transmembrane protein [Mycobacterium tuberculosis T17] gi|260185070|ref|ZP_05762544.1| putative transmembrane protein [Mycobacterium tuberculosis CPHL_A] gi|260199207|ref|ZP_05766698.1| putative transmembrane protein [Mycobacterium tuberculosis T46] gi|260203350|ref|ZP_05770841.1| putative transmembrane protein [Mycobacterium tuberculosis K85] gi|289441581|ref|ZP_06431325.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289445737|ref|ZP_06435481.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289568108|ref|ZP_06448335.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289572785|ref|ZP_06453012.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289748681|ref|ZP_06508059.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289414500|gb|EFD11740.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289418695|gb|EFD15896.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289537216|gb|EFD41794.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289541861|gb|EFD45510.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289689268|gb|EFD56697.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length = 367 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 19/330 (5%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ ++ L+ L F PVL AL++ P S+ + +S Sbjct: 25 LVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR-GLPRAVAVTLVLLSG 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L F+ + + LV++V + RWL + P + ++ + Sbjct: 84 FAVLGGILTFVVSQFIAGLPHLVTEVERSIDSAR---RWLIEGPAHLRGEQIDNAGNAAI 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++L+ + A + + + ++ L FF G SI Q + Sbjct: 141 EALRNNQAK---------LTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + R + ++A+ + +G+ + GVP + L + Sbjct: 192 AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF 251 Query: 251 MAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A IP + F AV + LL KG I A + L+P ++G + + Sbjct: 252 GAFIPLIGAVVAGFLAVVVALLAKG-IGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIH 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + +A Sbjct: 311 PLAVVLAIAAGGVLAGVVGALLAVPTVAFF 340 >gi|148381571|ref|YP_001256112.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. ATCC 3502] gi|153932794|ref|YP_001385948.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. ATCC 19397] gi|153934624|ref|YP_001389355.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. Hall] gi|148291055|emb|CAL85192.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152928838|gb|ABS34338.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. ATCC 19397] gi|152930538|gb|ABS36037.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. Hall] Length = 351 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 117/333 (35%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ ++ FL + P + A + + I K + ++ + I T+ Sbjct: 11 LILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEGE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTN---GIDFIPRFASRFGMIFLDYCLS-------IIFMIIALFFFYR 179 P S+ E + + + I S+ F+ S I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITSKIVSSFIGLLTSVPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ + + + + I K++ L + +++ + Sbjct: 183 DITKHNNKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N L + + + + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLI-SYAAVSTIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|73542459|ref|YP_296979.1| hypothetical protein Reut_A2774 [Ralstonia eutropha JMP134] gi|72119872|gb|AAZ62135.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 356 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 124/348 (35%), Gaps = 17/348 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M +LN + R ++ + L+ L P L A I + P ++ Sbjct: 1 MNAPLLNDET-KRVLLWIAVAAGLFAAIIALAPILTPFLLAFIFAYILTPGVDWMARRRV 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + ++V + ++ ++ +L + L ++ + + + L+ + Sbjct: 60 PRA--------IAVAVMILLLVVVCVVLVLLLIAVLQREIPQVREQLPMLLKKLNAVVAP 111 Query: 117 MWASELWTKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 A P +LS+ F + + + + +A G L+ + I + Sbjct: 112 RLADFGVRVRFDFPGLRSMLSDRFSASPEDLLAMLLNYAKVSGSALLEVAGMAFVIPIVM 171 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ D + ++++ L + ++++ ++ G ++ + + Sbjct: 172 FYLMMDWHMVMRRIEGLVPRRWVPKVRELTAETDVLLSQYLRGQILVMVILASIYSIGLT 231 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +AG V +GV T + IP A+ LL G+ + + + I FI Sbjct: 232 VAGFDVGVPVGVFTGLAVFIPYIGFGIGLVLAILAALLQFGDWYGLAAVAVVYGIGQFIE 291 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L P LVG I L L F L+ + G G+ + A++ V Sbjct: 292 SFYLTPRLVGERIGLHPLVVIFALLAFGQLFGFFGVLLALPTCAVLLV 339 >gi|113461497|ref|YP_719566.1| permease [Haemophilus somnus 129PT] gi|112823540|gb|ABI25629.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 350 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 114/335 (34%), Gaps = 19/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + +IL + P L +L I P+ + +K +LA+ Sbjct: 10 QVLVACAAIIVILGGIKLASEIVVPFLLSLFIAIICSPVVNFMTKRKIPH--WLAITLLF 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + L L + E + + + + ++L Sbjct: 68 VLIVVLFYFLASLISNTVQEFTQSIPQYK---------------VLLSQRLNDLLAFAHH 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L +++ I +F SRF + F + +I + + + F + ++ Q+ Sbjct: 113 FNIPLFFSTDSINDDFDPSIIMKFVSRFLLSFSNVVTNIFVLFLIVVFMLAEAPTVKQKF 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + + TI ++ GL + + + + + Sbjct: 173 TKLIVTENTVTQQNYIERILQGVIGYLGVKTITSVMTGLCIYFVLSVLDIQYAILWATLV 232 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP G+ I+ V + + + + + +V L P ++G + L Sbjct: 233 FLLNYIPNIGSIIAAVPVIVQSFLLNGFITGLVVSIAFILINTVVGNVLEPKMMGRKLGL 292 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L F L+ +G +G+ + P+ M L + Sbjct: 293 STLIVFLSLLFWGWLLGTVGMLLSVPLTMGLKIAL 327 >gi|153810088|ref|ZP_01962756.1| hypothetical protein RUMOBE_00469 [Ruminococcus obeum ATCC 29174] gi|149834266|gb|EDM89346.1| hypothetical protein RUMOBE_00469 [Ruminococcus obeum ATCC 29174] Length = 407 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 111/342 (32%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSV 70 I + + P L +I + PI + + ++ + ++V Sbjct: 10 IAAGIQLVFNILKPFLYGALIAYLLAPICNRMDERFLKWFPKATEKQKKGLKFLSIAIAV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 +C + +L + V + + R + + + + H S Sbjct: 70 ICAVTIVVLLILLILPQVWDSTVKIIKILPARLAYCNRMIDQLLKDQPELQTYFNHFSSQ 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFG-------MIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++ + I + +F + L + + L G Sbjct: 130 VENGLNDVLKANSSMMTTIQGIVNNITVQLIEVLSVFKNMFLGFLIAVYLLASRKLFGAQ 189 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L + + + ++ K+ F+G I + GL+ + L G S Sbjct: 190 AKLLLYGIFSNKWAKIIEEEVHYTDKMFNGFFVGKIIDSAIIGLICFAGTTLLGFESAAF 249 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + V+ + +IP G I ++ LL+ N ++A ++ I + + P ++G Sbjct: 250 ISVVIGVTNIIPFFGPFIGAIPCALLLLLGSNPWDALYFLIFIVILQQVDGNIIGPKILG 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ GL+G+ I L +I I ++ Sbjct: 310 NTTGVSSFWVLFSILLFGGLWGLVGMVIAVPLFGVIYDIIRK 351 >gi|315650584|ref|ZP_07903648.1| permease [Eubacterium saburreum DSM 3986] gi|315487148|gb|EFU77466.1| permease [Eubacterium saburreum DSM 3986] Length = 367 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 122/327 (37%), Gaps = 6/327 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A + A II Y + KK + + +A V + F++ ++ L + Sbjct: 40 LMPFVAGAVMAYIINILMD-FYEDLLLKKFHNKKIIRTVAIVLSIFTFVLVIVLLLGLII 98 Query: 87 LEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT-N 144 ++ +++ ++ N I + + +++ +++ +++ + Sbjct: 99 PQLIKIMFSIMYTNPGDIKKIIESIGKNNIVDKIADMMNVDINNIDISGYVTKLIRSVMS 158 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--- 201 + I F + +S+ ++ + D I+ Q D L P+ Sbjct: 159 SVGNILMGVISGISGFFNTIISVFMAVVFAIYILMDKERIAVQGDKLLRAFLPSKRDSVI 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + RI R+ F+ AI G++L +A +P ++ ++ + A+IP + Sbjct: 219 DVLRIFNTSFRNYFISQVKEAIILGVLLYIVMIIARLPYASSISILVGVTALIPVIGAYA 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +++ + + + + + + P +VG + LP + + G Sbjct: 279 GLFIGTLMILTKSFSSMIIFIIVHTVVQQFENNIIYPRVVGSSVGLPGMWVIVAVALGGS 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 G+ G+F+ + A + I K + Sbjct: 339 LGGIFGVFVAVPVAASLYFILKRETLK 365 >gi|226304565|ref|YP_002764523.1| hypothetical protein RER_10760 [Rhodococcus erythropolis PR4] gi|226183680|dbj|BAH31784.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 392 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 103/294 (35%), Gaps = 13/294 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ ++ + L + F+ + + +L + + + WL+ P Sbjct: 74 RSAAVIVVLLASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVT---QIQNWLTSGPLHFS 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ S +S++ E+ A+ G IF L+ + L FF Sbjct: 131 EDQIRQAGDSVVKSVQSNRESLTSGA-----LTTATVIGEIFTGALLT----LFTLIFFL 181 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G I Q + + + + +A + + +G+ + GV Sbjct: 182 YGGDQIWQFVTRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGV 241 Query: 239 PSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L + I A IP GA ++ + L+ A + + + ++ Sbjct: 242 PLALPLASLVFIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQ 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P L+G ++L L + G+ G++G + ++A++ + + + Sbjct: 302 PLLLGRAVRLHPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDPD 355 >gi|269959013|ref|YP_003328802.1| putative permease [Anaplasma centrale str. Israel] gi|269848844|gb|ACZ49488.1| putative permease [Anaplasma centrale str. Israel] Length = 376 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 111/343 (32%), Gaps = 11/343 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL-----AVIATVSVMCLFI 75 V ++ ++ A ++ + P+ + S + +A + + + + Sbjct: 28 AVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLESIGLPRPVSSFAIIFSSVAVFATLLVLL 87 Query: 76 VPLL----FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 VP+ +++ + + G M + L +L + Sbjct: 88 VPVAYSQTLAMAKLLVDKLPFAGVESIKTALQAYDMLRYDGVIGTMNPAALSPNNLFSSE 147 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + + G+ + ++ LF+ + + + Sbjct: 148 HVEFIKLFDSLYKNFIKVAVRVVQSGVGIGTIAARVFITLLLLFYILGSWPIVVKNALLM 207 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + G T + + + + + G+ + LGVI+ IM Sbjct: 208 VPRHYLEGFSHCMSRIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLVLGVISGIM 267 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPF 309 IP P+ A L + A + + V + P L+ + L Sbjct: 268 TFIPYVGPVLCAAFGACLALLQGFSWAGTAAVILVFVVGNVVESNIITPVLLSKKLDLNP 327 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+V GLLG + + A+++V+ + ++ K + Sbjct: 328 GWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLAQFAVEKYKRS 370 >gi|229084918|ref|ZP_04217171.1| UPF0118 membrane protein [Bacillus cereus Rock3-44] gi|228698391|gb|EEL51123.1| UPF0118 membrane protein [Bacillus cereus Rock3-44] Length = 362 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 121/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ ++ + LY LK +L I+ F K + + + Sbjct: 31 RSRGFQRFLVLILLALVLYGLKSMINLILITFILTFLMDRFQRFISRKIKINRKLIIACL 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + L +++ +L+ + L Q+ P Sbjct: 91 YIVLVTFIVTTLYKYLPVLTIQISQLIHQFKLFFQN-----------PPDNEVIRYVLST 139 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + + S+I + L + I Sbjct: 140 INQMELSKYIEQ------GVDVIYQSVANIGKVSMQILFSLILSLFFL----LEKERIIS 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ K RS +IA+ ++ A G P + Sbjct: 190 FTSKFKESKLRVFYEEIAYFGQKFARSFGKVIEAQFLIAVVNCILTVIALIFLGFPQLLV 249 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G I + ++ + + L P + Sbjct: 250 LAVMIFLLGLIPVAGVFISLVPLCIIAYNVGGIAYVVYILIFITVIHALESYFLNPKFMS 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + + Sbjct: 310 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLE 350 >gi|295836186|ref|ZP_06823119.1| membrane protein [Streptomyces sp. SPB74] gi|295825895|gb|EDY42221.2| membrane protein [Streptomyces sp. SPB74] Length = 411 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 121/359 (33%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ +++ + + L G VL A + P S ++ Sbjct: 37 RMPRWLPRAMVSALLLIACFQLGTWAFHRLTGLLINVLIAFFLALAIEPAVSWMSAR-GM 95 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + V+ + L +++ +V ++ V +W++ G Sbjct: 96 RRGAATGIVFLGVLIFAAGFVTLLGSMLAGQIQNMVEDFP---KYLDSVIKWVN----GT 148 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + ++L + + +++ + + A L ++ +++ F+F Sbjct: 149 FHTDLSRLEVQDSVLHSDWLQRYVRNSASGVLDVSAQ-----VLGGLFQLLTLLLFAFYF 203 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ A + I ++A+ G+ + G Sbjct: 204 AADGPRLRRALCSVLPPAKQAEVVRAWEIAVDKTGGYLYSRGLMALISGIAHYILFQALG 263 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P ALGV +++ IP A+ + + + + A + ++ + + L Sbjct: 264 IPYAPALGVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLVFVVVYQQFENYLL 323 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F ++ G +G +G I +A + + + Sbjct: 324 QPKLTARTVDIHPAVAFGSVIAGTALLGAVGALISIPAVATLQAFLAAYVKRYDVTDDP 382 >gi|119488027|ref|ZP_01621471.1| hypothetical protein L8106_11537 [Lyngbya sp. PCC 8106] gi|119455316|gb|EAW36455.1| hypothetical protein L8106_11537 [Lyngbya sp. PCC 8106] Length = 357 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 119/324 (36%), Gaps = 15/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +L+ +L+ VL+A +I F +PI F+ ++ F + + Sbjct: 26 FLLLLFKYLQPVPGIVLTASLIAFLLEYPI--VFLEQRGVPRGFAITGVILLALVFLGFL 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L ++ E V+++ + G L + L + Sbjct: 84 IFVLSPLVFQQLIEFVNRLPAWIEEGRKQLDTLDE---QTILQYLPMDISDLTAQISGQL 140 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 LK+ + I + ++ L++I ++ +G + L S L Sbjct: 141 SRTLKSLTAEII-----DLTLNTINSALNLIVTVVLTILLVLNGEKLWDGLISW---LPG 192 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++I + + R + G I+A+ + L A+ + +P + G +++IP G Sbjct: 193 EWSEQIQLTIQQSFRGYYSGQAILALILSIALSFAFLIFQIPFWLLFGFGIGSLSLIPFG 252 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + V LL N+F + I I + + P L+GG L L+ Sbjct: 253 GTFAVL-VISTLLALHNVFLGLKVLAIALIIGQINENVIAPRLIGGITGLNPALVIVSLL 311 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 GV+ G+LGL + +L+ I Sbjct: 312 AGVKIAGVLGLLLAVPTASLVKKI 335 >gi|170691340|ref|ZP_02882505.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170143545|gb|EDT11708.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 358 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 128/343 (37%), Gaps = 9/343 (2%) Query: 5 MLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + W+ + + + + L+ L P L I+ + P + + ++ + Sbjct: 9 TPVQRRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRVPRALAAL 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + + ++ +L +F E +L +V H V WL P Sbjct: 69 LMMLLFTLLMTLL-VLLVFAVIQKEGPQLRQQVPQLFAH---VNAWLQ--PKLAMLGLAD 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + + G + + +++ + + LF+ D Sbjct: 123 SLDFASVRDMVMGQLEGSAQTVARYAWTSIVTSGNVMMTVVGNLVMVPLVLFYLLYDWNR 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ S+ + +++R + +++ G ++ + +A +AG + Sbjct: 183 MLLRMQSVVPRRWLDKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAAALSIAGFEIALP 242 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G+ T + IP G A A+ LL GN + + L + + L P LV Sbjct: 243 VGIFTGLAVFIPYIGFATGLALALLAALLQFGNWYGFGAVALIYGVGQIVESFYLTPRLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G I L L F L+ + G G+ + + A+++V +E Sbjct: 303 GERIGLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAMRE 345 >gi|152980582|ref|YP_001353231.1| hypothetical protein mma_1541 [Janthinobacterium sp. Marseille] gi|151280659|gb|ABR89069.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 390 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 117/340 (34%), Gaps = 14/340 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M +N +G+ +I + V +L + FF P+L + I +T P+ + Sbjct: 30 MIHLPVNARGVALTIIATVAFVFALSVAQAFFIPLLFGIFIAYTLNPLVVWLERIRIPR- 88 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MW 118 + T V+ + F E ++ + A Q + L G + Sbjct: 89 ----WLGTSVVILAIVCSAAFTVNNLRDEFNSILVSLPTATQKLARAVKNLQRGQGSTIQ 144 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI---FLDYCLSIIFMIIALF 175 + + + +K+ + F+ + + ++ +F Sbjct: 145 QMQAAATEIEKATNQAAGGRPVVKSPVEQSVFNFSQWLWAGSVSVVGFLGQATMVMFLVF 204 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF + G ++L + H +I + I++ + + + GL++ A Sbjct: 205 FFLQSGDMFRRKLVKISGHSLHTRKITVQILDAINTSIQNYMFMLLVTNVLFGLLMWGAL 264 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFI 291 G+ + A + I+ +IP G + A + ++ G + + + + Sbjct: 265 RWIGLENAGAWALAAGILHIIPYFGPLLIMAATGVTAFMQFGTFSSVLAVGGATLLIATV 324 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 V + ++ G K+ + F L+ G+ G+ +G Sbjct: 325 VGTFVTTWMTGRIAKMNAVAVFVSLLFWAWLWGICGMLLG 364 >gi|120598439|ref|YP_963013.1| hypothetical protein Sputw3181_1622 [Shewanella sp. W3-18-1] gi|120558532|gb|ABM24459.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] gi|319426786|gb|ADV54860.1| autoinducer-2 transport protein, TqsA [Shewanella putrefaciens 200] Length = 368 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 107/328 (32%), Gaps = 23/328 (7%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + IIL + P + + I P + +LAVI + + L Sbjct: 19 FVVIILAGIKAASPIVVPFVLSSFIAMICNPAIGLMTKYRV--PKWLAVILLMCFIVLMG 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + + E + + + W H ++ I Sbjct: 77 LWLASVVGSSINEFSKQLPQYRDQLIEQFS-----------------WIIHKLQALNIHI 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L + + ++ +++ + F + S+ ++L L Sbjct: 120 SKDQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIVLTIVFMLFEAQSLPKKL-HLALDD 178 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++I R + V + L ++++ GL++G GV + VI + IP Sbjct: 179 PDMRLQQIDRFLQSVNQYMVLKT-LVSLATGLIVGIGLTFIGVDYALLWAVIAFLFNYIP 237 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A L ++ + P +G + L L F Sbjct: 238 NIGSIIAAIPAVLLAFIQLGPTAAGGTALLYIGANMVMGNVIEPKFMGRGLGLSTLVVFL 297 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ M + + Sbjct: 298 SLIFWGWLLGSVGMLLSVPLTMVVKIAL 325 >gi|301762328|ref|XP_002916585.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein C9orf5-like [Ailuropoda melanoleuca] Length = 883 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 653 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 712 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 713 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 772 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 773 TQGLGCRAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 829 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 830 GPILLCILVV 839 >gi|282900348|ref|ZP_06308299.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281194853|gb|EFA69799.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 376 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 113/313 (36%), Gaps = 17/313 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ A ++ F + +A++ + + + + + LF + + + Sbjct: 32 IVILVGASVLAFLLNYPLIWMEKQ-GAKREQVAILVFLIALSILLALGVTLFPLALTQAR 90 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDF 148 +LV+++ P W+ + + + P +L + + + Sbjct: 91 QLVNRL----------PEWIDSGRSQLMILNEKAEMMGLPINLDAIVVQINDRVKSQLQA 140 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I ++ + L + ++ F+ + G + Q L F + + R+ Sbjct: 141 ITAQVLNLAVVTVTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPSKFREPFSRTVRL-- 198 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 ++ F+ I++ L ++ VP + G+ IMA+IP G A++ Sbjct: 199 -SFQNFFITQLILSTCMASALIPSFLWLKVPYGLLFGLTIGIMALIPFGGS-VGIAITTL 256 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ +I + I I++ L P ++G L + ++ G R GLLG+ Sbjct: 257 LVSLQDISMGVRVLAAAVIVQQILENILAPRILGNFTGLNPVWVLISVLTGARVGGLLGV 316 Query: 329 FIGPVLMALIAVI 341 + +I I Sbjct: 317 IVAVPFAVVIKTI 329 >gi|296125128|ref|YP_003632380.1| hypothetical protein Bmur_0071 [Brachyspira murdochii DSM 12563] gi|296016944|gb|ADG70181.1| protein of unknown function UPF0118 [Brachyspira murdochii DSM 12563] Length = 435 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 121/356 (33%), Gaps = 20/356 (5%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ + L +L+ +K AP + + I + P+ + +K AV+ + Sbjct: 74 IVLILALFTLWVIKEAGYLVAPFIWGIFIAYMFDPLITKMQTKI---PRIAAVLFIFIPL 130 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + V +E E++SK + I L I + K Sbjct: 131 IIIAVIFFVFILPRTIEEMEVISKSLPEYVDKIYNSISLLLISVSDKLNGSIGKSFDIDM 190 Query: 132 SLKILSE-----------TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ S T + IDF + S IF + + F+ D Sbjct: 191 AIDAASIKDFLFGSDGIFTLIYKKMIDFRFQNISSLTTIFSVIFSYFVILPFVTFYLMLD 250 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I ++ + + +I + +I GMTI+A+ ++ + Sbjct: 251 FQNIKSKIIKIIPMRWQTSISEIVKKSNSIINGYVRGMTILALSFFIISYILLSVTNTRY 310 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLR 297 L ++ I+ IP G +F + +I NI+ A + + + + Sbjct: 311 AFILALLRGILNYIPFIGPFAAFVTALLVGIITENIWWHGALKICIIFGFVQILDSGLMA 370 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++G +K+ + F + G G LG+ ++ ++ + +K Sbjct: 371 PKILGKSVKIHPIAVMFSTIIGGVLFGFLGILFSVPFCGIVLLVVQNFFNKYYHSK 426 >gi|170745511|ref|YP_001766968.1| hypothetical protein Mrad2831_6242 [Methylobacterium radiotolerans JCM 2831] gi|170659112|gb|ACB28166.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 659 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 109/351 (31%), Gaps = 16/351 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LYF + F P++ A+++ F P+ + + K + ++A + Sbjct: 23 RGLLTLAVGVVLVAALYFGREVFIPLVLAVLLSFVLGPVVN-LLRKAKLGRVPSVIVAVL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WL---SDIPGGMWASELWT 124 + + + L + + + WL + I Sbjct: 82 LALGVLGGIAAVIGTQVAGLAGNLPQYQATVQRKVAGLQQGWLGEANRILQKFNHQVHDV 141 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIP---------RFASRFGMIFLDYCLSIIFMIIALF 175 + + +T + A + + + +++ + Sbjct: 142 TQKADAAGTTAATGPAGETPKAQLVRVEQPEPSPFALAEKVLGPIVSPLTDVGIVLVVVV 201 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + ++ L + + FL + G+++G W Sbjct: 202 FLLLQREDLRNRMIRLFGSSDLHRTTVAMDDAAGRLGTYFLAQLGMNATFGVIVGIGLWF 261 Query: 236 AGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GVP+ + GV +AIM IP I+ V++ + + + Sbjct: 262 IGVPNPLLWGVFSAIMRFIPYIGAIASGILPVALAAAVDPGWSMVIATAALFLVAEPLFG 321 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P L G L + G +GL + + V+ + Sbjct: 322 QVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|108797149|ref|YP_637346.1| hypothetical protein Mmcs_0169 [Mycobacterium sp. MCS] gi|119866234|ref|YP_936186.1| hypothetical protein Mkms_0178 [Mycobacterium sp. KMS] gi|108767568|gb|ABG06290.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119692323|gb|ABL89396.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 381 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 114/336 (33%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + +L + L+ PV A ++ P F+ ++ + + Sbjct: 25 RLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVD-FLDRRGAPRGGAVALVLL 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + L F+ + M L +V + RWL + P + ++ + Sbjct: 84 SGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMR---RWLVEGPLDLSREQIDNAGNA 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++++ E + A + + ++ L F G +I + Sbjct: 141 AIEAVRNNQER---------LTSGALSTAGTITEIVTGALLVLFTLIFLLHGGRNIFGFI 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + ++A+ + + +G+ + VP + L + Sbjct: 192 TKVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLALPLASLV 251 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P GA ++ I L+ + A + L+P ++G + + Sbjct: 252 FLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVMGRAVSI 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + GG G++G + +A + + Sbjct: 312 HPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIR 347 >gi|74314074|ref|YP_312493.1| hypothetical protein SSON_3712 [Shigella sonnei Ss046] gi|73857551|gb|AAZ90258.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 376 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|226303651|ref|YP_002763609.1| hypothetical protein RER_01620 [Rhodococcus erythropolis PR4] gi|226182766|dbj|BAH30870.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 382 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 111/318 (34%), Gaps = 21/318 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 G PV AL++ PI + ++ ++ ++ + L ++ L Sbjct: 49 VFGGILGPVFLALVLTIAVQPIQDWSQRRGW--PKWVGMLGSLVTVYLILLGLAASLIVS 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ ++ + + + R L+ ++ L + Sbjct: 107 TAQLATILPQYSEEMTNLLNEGR----------------DKLADFGVSTEQIQSTLSSID 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L ++F++ L F DG SI +L+ L E + Sbjct: 151 LTKVVGVLESGLEGLLGILSDLVFILALLLFMAFDGMSIRSRLNVLSEQRPEISYA--LS 208 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 R + T+ + ++ G A WL G+ V +++ I IP G I Sbjct: 209 TFAAGTRKYLVVSTVFGLIVAVLDGGALWLMGIQLPVLWALLSFITNYIPNIGFVIGVIP 268 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ L++G + + + ++ F++ ++P VG + L TF LV +G Sbjct: 269 PALLGLLQGGPWLMLWVIVVYSVINFVIQSIIQPKFVGDAVGLSVTMTFLSLVFWAWVLG 328 Query: 325 LLGLFIGPVLMALIAVIW 342 LG + L L+ + Sbjct: 329 ALGALLAIPLSLLVKAVL 346 >gi|90407160|ref|ZP_01215348.1| hypothetical protein PCNPT3_03016 [Psychromonas sp. CNPT3] gi|90311736|gb|EAS39833.1| hypothetical protein PCNPT3_03016 [Psychromonas sp. CNPT3] Length = 360 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 114/331 (34%), Gaps = 26/331 (7%) Query: 5 MLNPQGIMRWMI----MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M N + R ++ + I L + P L AL I P + + Sbjct: 1 MQNVSTLARSLLCCASLVIALAGIKIAAPIVVPFLLALFIAIICNPAVNFLERYRIPR-G 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + + LFI + N+ +P + + + + + Sbjct: 60 FAITLIIGFIFFLFIGLGGVIGSSV--------------NEFRQALPSYEAQLSTQLSWA 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + F + + S F + + I +++ + F + Sbjct: 106 VQWMGEHHIEINKFEIQSYFNPAKVMTLVTATLSGFSSMLGN----IFLLLLTVVFMLVE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S++L + P +K + ++ T+I++ GL++G W+ V Sbjct: 162 GEGFSKKLHIAFDD--PIGKEKRMQRFLNMVNRYMAIKTLISLATGLIIGFVLWIMNVDF 219 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V ++ ++ IP G+ ++ I ++ + +A+ + I+ + P Sbjct: 220 FVLWALLVFLLNYIPNIGSILAAVPTVILTFLQLGMGSASIVIGLFVAVNMIMGNMVEPK 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +G + L L F L+ +G++G+ + Sbjct: 280 YMGRSLGLSTLVVFLSLIFWGWLLGMVGMLL 310 >gi|114626080|ref|XP_001144114.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 879 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 649 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 708 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 709 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 768 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 769 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 825 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 826 GPILLCILVV 835 >gi|256820979|ref|YP_003142258.1| hypothetical protein Coch_2153 [Capnocytophaga ochracea DSM 7271] gi|256582562|gb|ACU93697.1| protein of unknown function UPF0118 [Capnocytophaga ochracea DSM 7271] Length = 358 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 118/347 (34%), Gaps = 24/347 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMC 72 +++ + L +LY L+ ++ +L++ P+ F K + ++ T V+ + + Sbjct: 17 IVLVVLGLYTLYLLQSIIIYLIVSLVLTLMGKPLIQFFYKKLKIKNRTLCVVLTMLLFVI 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + K L S + + + L Sbjct: 77 LSLGVFSLFIPLLISQGKNLSSLNIDLLKDNLDAL--------------LHQTLSKVGLQ 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + S + IP F + F + + ++ FFF +DG I L S+ Sbjct: 123 REDYSFGVQEMLNFIDIPNFLNSFISFISSFGVGFFSVLFITFFFMKDGDRILIALLSIF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K + ++ F+G+ + ++ + GV + + ++ A++ Sbjct: 183 SPKRKRKLKTSIFKINNLLSRYFVGLMLQLTILFIIYTIVLLIFGVENAFIIALLCALLN 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNI--------FNATCLFLWGAIELFIVDKTL-RPFLVGG 303 +IP P+ + L + N+ T L G I +D +P + Sbjct: 243 LIPYIGPMIGFILMALLTMSSNLQNDFMTVSLPTTIYVLIGFIIGQFIDNFFSQPLIFSN 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +K L F + G+ G+ + ++ V+ KE K Sbjct: 303 SVKSTALEIFLITLISGTLFGITGMVVAIPAYTVLKVVLKEFFPNNK 349 >gi|269213626|ref|ZP_06158084.1| acetyltransferase, GNAT family [Neisseria cinerea ATCC 14685] gi|269146150|gb|EEZ72568.1| acetyltransferase, GNAT family [Neisseria cinerea ATCC 14685] Length = 366 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 123/339 (36%), Gaps = 12/339 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +++ + L AP A ++ + P+ KK + ++ V + L Sbjct: 27 VFLTVLIWLAFALGDTLAPFAVAAVLAYVLDPLVEWL-QKKGFNRAVASMTVMVFALLLL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL + + + +VS++ Q + L + S + S L+ Sbjct: 86 AALLLIIVPMLVGQFNSMVSRLP---QLAGFMQNTLLPLLKDTVGSYVEIDQASVIAWLQ 142 Query: 135 ILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + T F + R +S + L + + L D S + L Sbjct: 143 AHTGELSNTLKAWFPVLMRQSSNIVSSIGNLMLLPLLLYYFL----LDWQRWSCGISKLV 198 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ Sbjct: 199 PRRFADTYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILV 258 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFL 310 +P + ++ + L +W + F+ + P +VG I L Sbjct: 259 FVPYLGAFTGLLLATVAALLQFASWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPF 318 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 319 WVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 357 >gi|254975864|ref|ZP_05272336.1| hypothetical protein CdifQC_11154 [Clostridium difficile QCD-66c26] gi|255093251|ref|ZP_05322729.1| hypothetical protein CdifC_11434 [Clostridium difficile CIP 107932] gi|255314993|ref|ZP_05356576.1| hypothetical protein CdifQCD-7_11612 [Clostridium difficile QCD-76w55] gi|255517668|ref|ZP_05385344.1| hypothetical protein CdifQCD-_11201 [Clostridium difficile QCD-97b34] gi|255650778|ref|ZP_05397680.1| hypothetical protein CdifQCD_11376 [Clostridium difficile QCD-37x79] gi|260683863|ref|YP_003215148.1| membrane protein [Clostridium difficile CD196] gi|260687523|ref|YP_003218657.1| hypothetical protein CDR20291_2171 [Clostridium difficile R20291] gi|306520681|ref|ZP_07407028.1| hypothetical protein CdifQ_13206 [Clostridium difficile QCD-32g58] gi|260210026|emb|CBA64079.1| conserved membrane protein [Clostridium difficile CD196] gi|260213540|emb|CBE05283.1| conserved membrane protein [Clostridium difficile R20291] Length = 353 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 122/349 (34%), Gaps = 5/349 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + I+++ + +I +Y + F P+L +I F I I ++ Sbjct: 2 DIQKQKNFIIKFTYVVLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIRLITNNTNLN 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ +F +FL +++ VS V L + + L+ + + AS Sbjct: 62 RTLISIVILLIFYGLCIFLLVSFGVKIFASVSDVFFRLPEIYKSSIQPTLNTLFSKIDAS 121 Query: 121 EL-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L S L + + + L +I +IA FFF Sbjct: 122 TPNVNLSLILGWDNISQSMMSLVASISTNALNAIASIASKTPAFMLKLIITLIASFFFTF 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + I + I+ L L + V Sbjct: 182 DYQKIVNFILKQFPEKSQFMIINIKNSSINALLKLLKAYAILLSVTFLELLIGLTILKVE 241 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + VI A++ ++P G T I LI GNI N L I + +V + L P Sbjct: 242 NAFTISVIIALVDILPVLGTGSILTPWMIISLINGNI-NLAIGLLILYIIITVVRQILEP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + G + G+ GLF P+ +I + I+ Sbjct: 301 KVVGHQIGLYPLITLMCMFIGAQLFGIAGLFGFPIAATIIKNLHDNGII 349 >gi|158423889|ref|YP_001525181.1| putative membrane transport protein [Azorhizobium caulinodans ORS 571] gi|158330778|dbj|BAF88263.1| putative membrane transport protein [Azorhizobium caulinodans ORS 571] Length = 618 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 104/357 (29%), Gaps = 25/357 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ ++ +Y + F PV A+++ F P+ + Sbjct: 12 RPVHRESRTLVFLGALALIAVVYIGREVFVPVALAVLLSFVLSPVLLVLRRLRIPR---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V+ L + LL L ++ +L S + + R L G E Sbjct: 68 -TLGVAGVVMLTFIGLLALGAVVATQVGQLASDLPHYQANVRDKIRDLKSTASGSATMER 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRF-----------------ASRFGMIFLDYCL 165 L S + K G L Sbjct: 127 VAGMLQDLSSELDRPDPQPKFQLDAAAAAQRPIPVEIRAPELGTLAMLRSLGEPLLHPLA 186 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + I L F + + L + L ++ G Sbjct: 187 TTGIIFIFLIFILLQREDLRNRFIRLAGAHDIQRTTAALDDAGARLSRFLLTQVVLNAGF 246 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FL 283 G V+G L GVPS + G++ A++ +P I + L + + + + + Sbjct: 247 GCVIGLGLGLIGVPSAMLWGLLAAVLRFVPYIGAIIAALLPSALALAVDPGWSMVVWCIV 306 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 A+ +V + P L G L + G +GL + P+ + L+ Sbjct: 307 LFAVVEPVVGHIIEPLLYGRSTGLSPVAVIASATFWTWLWGPIGLVLATPLTLCLVV 363 >gi|126735141|ref|ZP_01750887.1| hypothetical protein RCCS2_14729 [Roseobacter sp. CCS2] gi|126715696|gb|EBA12561.1| hypothetical protein RCCS2_14729 [Roseobacter sp. CCS2] Length = 367 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 117/352 (33%), Gaps = 28/352 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 LV L+FL P + I + PI +V + IV Sbjct: 17 AFFLVVLWFLGDVILPFVLGGAIAYCLDPIADRLEKAGCSR--------MAAVAIITIVT 68 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +L +L + LV + + L G + S + Sbjct: 69 ILIFVLLFLLVIPTLVQQTASLIDTAPELFDRLRT--GLTERFPQLMDNQSVAYQQLLAV 126 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 +++ G + + S + ++ + ++ + + + D +++ ++D + Sbjct: 127 GETIQSKGGELVNGLVSS-ALGLINILVLLVIVPVVAVYMLLDWDNMTAKIDDMLPRDHV 185 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++++R + + S G + + G A LAG+ + +G I ++ IP Sbjct: 186 DTIRQLARDIDATLASFIRGQGTVCLVLGTYYAVALMLAGLNFGLIVGFIAGLITFIPYI 245 Query: 258 APISFTAVSIYLLI-----------------KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +++ L + N + + F+ L P L Sbjct: 246 GALVGGVLAVGLALFQFWGSVEVVDGDTISYTTNWLRIGIVAGIFGLGQFLEGNILTPKL 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VGG + L + F L G +G+ + + A+I V+ + + K + Sbjct: 306 VGGSVGLHPVWLLFALSVFGTLFGFVGMLVAVPIAAMIGVVARWGLGQYKHS 357 >gi|126699888|ref|YP_001088785.1| hypothetical protein CD2273 [Clostridium difficile 630] gi|255101415|ref|ZP_05330392.1| hypothetical protein CdifQCD-6_11449 [Clostridium difficile QCD-63q42] gi|255307288|ref|ZP_05351459.1| hypothetical protein CdifA_11907 [Clostridium difficile ATCC 43255] gi|115251325|emb|CAJ69157.1| putative sporulation integral membrane protein [Clostridium difficile] Length = 353 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 122/349 (34%), Gaps = 5/349 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + I+++ + +I +Y + F P+L +I F I I ++ Sbjct: 2 DIQKQKNFIIKFTYVVLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIRLITNNTNLN 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ +F +FL +++ VS V L + + L+ + + AS Sbjct: 62 RTLISIVILLIFYGLCIFLLVSFGVKIFASVSDVFFRLPEIYKSSIQPTLNTLFSKIDAS 121 Query: 121 EL-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L S L + + + L +I +IA FFF Sbjct: 122 TPNVNLALILGWDNISQSMMSLVASISTNALNAIASIASKTPAFMLKLIITLIASFFFTF 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D I + I + I+ + L + V Sbjct: 182 DYQKIVNFILKQFPEKSQFMIINIKNSSINALLKLLKAYAILLSVTFIELLIGLTILKVE 241 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + VI A++ ++P G T I LI GNI N L I + +V + L P Sbjct: 242 NAFTISVIIALVDILPVLGTGSILTPWMIISLINGNI-NLAIGLLILYIIITVVRQILEP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + G + G+ GLF P+ +I + I+ Sbjct: 301 KVVGHQIGLYPLITLMCMFVGAQLFGIAGLFGFPIAATIIKNLHDNGII 349 >gi|309800351|ref|ZP_07694518.1| membrane protein [Streptococcus infantis SK1302] gi|308116023|gb|EFO53532.1| membrane protein [Streptococcus infantis SK1302] Length = 205 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 73/198 (36%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S +++I M LF+ RDG + + + K+ V + + + Sbjct: 2 SALISGTSQVIVALIIMPFMLFYLLRDGKGLRDHITQFLPNKLREPVGKVLTDVNQQLSN 61 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G +A+ ++ + + G+ V LG+ ++ +IP ++ L + Sbjct: 62 YVRGQITVAVIVAIMFIIFFKIIGLRYAVTLGITAGVLNLIPYLGSFLAMIPALVLGLIA 121 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + + +E I + + P ++G + + + F L+ G+ G+ +G Sbjct: 122 GPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPITILFVLLTSGSMFGVWGVLLGIP 181 Query: 334 LMALIAVIWKESIMAIKE 351 + A V+ K+ Sbjct: 182 VYASAKVVISAIFEWYKK 199 >gi|47077828|dbj|BAD18785.1| unnamed protein product [Homo sapiens] Length = 431 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 201 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 260 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 261 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 320 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 321 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 377 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 378 GPILLCILVV 387 >gi|229029652|ref|ZP_04185728.1| UPF0118 membrane protein [Bacillus cereus AH1271] gi|228731656|gb|EEL82562.1| UPF0118 membrane protein [Bacillus cereus AH1271] Length = 337 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVTFIGTTLYKYLPVLTIQISQLIHQFRLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIS 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSSLKVFYEEIAYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ I + L P + Sbjct: 228 LAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITIIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLN 328 >gi|218462579|ref|ZP_03502670.1| hypothetical protein RetlK5_25350 [Rhizobium etli Kim 5] Length = 287 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 74/194 (38%), Gaps = 8/194 (4%) Query: 141 LKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + G+ F+ ++ G +D ++ + F+ D + ++D + Sbjct: 49 ILSEGMGFLTGLFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMVSKVDQWIPRDYV 108 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A ++I++ + + I G + + G+ + L G+ + +G+ +++ IP Sbjct: 109 ADVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIGLFAGMISFIPYV 168 Query: 258 APIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + V+I + + ++ + F+ L+P LVG + L + Sbjct: 169 GSLVGLVLSVGVAIVQFWPDYPWIGLVIVVFFSG-QFLEGNILQPKLVGSSVGLHPVWLM 227 Query: 314 FGLVGGVRTMGLLG 327 F L G +G Sbjct: 228 FALFAFGALFGFVG 241 >gi|315224179|ref|ZP_07866019.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga ochracea F0287] gi|314945912|gb|EFS97921.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga ochracea F0287] Length = 358 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 118/347 (34%), Gaps = 24/347 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMC 72 +++ + L +LY L+ ++ +L++ P+ F K + ++ T V+ + + Sbjct: 17 IVLVALGLYTLYLLQSIIIYLIVSLVLTLMGKPLIQFFYKKLKIKNRTLCVVLTMLLFVI 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + K L S + + + L Sbjct: 77 LSLGVFSLFIPLLISQGKNLSSLNIELLKDNLDAL--------------LHQTLSKVGLQ 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + S + IP F + F + + ++ FFF +DG I L S+ Sbjct: 123 REDYSFGVQEMLNFIDIPNFLNSFISFISSFGVGFFSVLFITFFFMKDGDRILIALLSIF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K + ++ F+G+ + ++ + GV + + ++ A++ Sbjct: 183 SPKRKRKLKTSIFKINNLLSRYFVGLMLQLTILFIIYTIVLLIFGVENAFIIALLCALLN 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNI--------FNATCLFLWGAIELFIVDKTL-RPFLVGG 303 +IP P+ + L + N+ T L G I +D +P + Sbjct: 243 LIPYIGPMIGFILMALLTMSSNLQNDFMTVSLPTTIYVLIGFIIGQFIDNFFSQPLIFSN 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +K L F + G+ G+ + ++ V+ KE K Sbjct: 303 SVKSTALEIFLITLISGTLFGITGMVLAIPAYTVLKVVLKEFFPNNK 349 >gi|257452512|ref|ZP_05617811.1| permease [Fusobacterium sp. 3_1_5R] gi|317059053|ref|ZP_07923538.1| permease [Fusobacterium sp. 3_1_5R] gi|313684729|gb|EFS21564.1| permease [Fusobacterium sp. 3_1_5R] Length = 373 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 121/338 (35%), Gaps = 15/338 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P++ A+ + +P+ K ++ + + + +L + + Sbjct: 39 FFIPLIWAMFLSILLYPLQKFLEEKLHLKRELALIVVLILLGLCVSLFMLTVIPQVSKSI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 KEL Q + + + + + + L ++ + + + + I I Sbjct: 99 KEL-------QQIYPYMEKRVGEFLDKILSLLHKQGLLLMNETEIMKAISEYTQDNIQKI 151 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQLDSLG----EHLFPAYWKK 202 + D + I LF F + ++ + + + Sbjct: 152 QQIGISIFWNVFDVTFGLANFFIGLFLACFILLKPEDFVKVIERVIYLNVKKEKALNIIE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I R + + +G +++I L++ +L P V ++ + MIP + Sbjct: 212 ILRKSKDIFLNYVVGRLLVSIIVALIVFLILFLTKTPYPVLTALLFGVGNMIPYLGVLGA 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + VS +L++ + L + + + P +VG + L ++ + Sbjct: 272 SIVSGFLILIFAPYKIGYLIFAIILSQALDGFIIGPKIVGDKVGLNSFWVVVAILLCGKL 331 Query: 323 MGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSN 359 MG+ G+F+G + +I +I++E +++ KE I N Sbjct: 332 MGIAGMFLGVPIFCIIKLIYQEKWRAYVEKEKEGIEEN 369 >gi|325840825|ref|ZP_08167189.1| putative membrane protein [Turicibacter sp. HGF1] gi|325490195|gb|EGC92532.1| putative membrane protein [Turicibacter sp. HGF1] Length = 386 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 121/335 (36%), Gaps = 19/335 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVSVMCLFIVPLLF 80 +P+L A +I + + ++ S+ I+ + + L + Sbjct: 53 ISPILYAFVISYILYRPLMFIERNFKKGFKKISKKGISNGMARTISILLLAILVFFAIYT 112 Query: 81 LFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + E + V+ + + W++++ + A + + + Sbjct: 113 LINSIFPPLIENIDTVMQSLPNFQTIITEWINNLTPYIKAVSITNEQIQEFTLFLTNLLK 172 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG----EHL 195 L TN ++ + ++ + II F+F +D +I +D LG + Sbjct: 173 GLLTNALN----IGTGVVTNLTGLVINTLATIILTFYFLKDKETIFAGIDKLGTVIFKPQ 228 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A K + +V + +G I A G+ + G P + +G+I + +IP Sbjct: 229 IKAKIKHFLHDLHEVFGNFIVGQLIDAAIVGVASSLLLLIIGHPFALLIGLIAGVTNIIP 288 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI A+++ L + ++ F+ I ++P ++G + L + F Sbjct: 289 YVGPIIGAALALILGLFTSVKLGILGFILLIAYQQIDGYFIQPKILGDSVGLAPVWIFIV 348 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G +G G+ + + AL V ++ Sbjct: 349 ILIGGNYLGAPGMILSVPIAALCKVYIDRRFQKLE 383 >gi|257054884|ref|YP_003132716.1| putative permease [Saccharomonospora viridis DSM 43017] gi|256584756|gb|ACU95889.1| predicted permease [Saccharomonospora viridis DSM 43017] Length = 367 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 113/351 (32%), Gaps = 27/351 (7%) Query: 17 MFIILVSLYFLK-------GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ +L+ L+ P+ AL+ P+ S + + V A + Sbjct: 23 FLILFAALWALRNIGKHLSYVIIPLAVALLFTAVLEPVVSWLVRHRWPRP-LAVVAALLF 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + F+ + + EL +V+ + + + WLS P Sbjct: 82 GFVIVGGLVAFVVFSVIDSYDELRRRVLESIE---QLRSWLSQSP------------FPA 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + ++ N + + + F + + ++ ++ F G + Sbjct: 127 SGELLGRVQNWIGGNQDTLVSQTLTAF-STVGSFFVGLLIALVLFIMFLHAGPRLWAATL 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 I R + + ++A+ + + +G + GVP V L + Sbjct: 186 LPWRPSTRELLDSIGRRAYRGVVIYVRVTALVALIDAIGIGIGLAIVGVPLTVPLAALVF 245 Query: 250 IMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I IP + F AV++ L+ G A + + + + L P L G L Sbjct: 246 IGGFIPYIGAVVSGFLAVAVTLVSNG-FVPALIILGVVLLVQQLEGQVLHPILQGNFTSL 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LV G G+ G+ L+A I + +E+ + Sbjct: 305 HPAVVLVALVIGGAEGGIAGVLFAVPLLAAIRGAVLAYAEHRAKEEERAKA 355 >gi|206977447|ref|ZP_03238342.1| putative membrane protein [Bacillus cereus H3081.97] gi|206744297|gb|EDZ55709.1| putative membrane protein [Bacillus cereus H3081.97] Length = 337 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 121/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ +I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYGEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|120436003|ref|YP_861689.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117578153|emb|CAL66622.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 362 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 131/343 (38%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++L L+ ++ + A +I PI +K LAVI + ++ V Sbjct: 20 ILLLLYFLWEIQSVIVYIAVAGVIALVGRPIVIFLRNKLRL-PNQLAVITVLILVLAIFV 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++F+F ++E + + ++ + + +D+ + + Sbjct: 79 GIIFVFVPIVIEQSKYLGQI--------DIEAFKNDLNDLNQQVNKYLGVEEINIIEGLK 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 F++ + IP+F + I +++ ++ FFF +D + + Sbjct: 131 RSEFIRNFDVSLIPQFLNNVFGILGATLIAVFSILFISFFFLKDSKLMLNSILVFANRGD 190 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++++ + ++ F+G+T+ ++ + + + +A+ I A + ++P Sbjct: 191 EQKFQRVFNKIKVLLSRYFVGLTMQIAVLFILYTILLSVFEINNPIAIAFICAFLNLVPY 250 Query: 257 GAPISFTAVSIYLLIK---GNIFNATCL-----FLWGAIELFIVDKTL-RPFLVGGPIKL 307 P+ + +I G F++ L + G ++D + +P + G +K Sbjct: 251 LGPLLAGILMALFVISSFLGADFSSIILPRLIYVMLGYGICQLIDNFISQPMIFGASVKS 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G+ G+ + + VI KES+ K Sbjct: 311 HPLEIFLIILIAGLMFGITGMVVAVPFYTALKVIAKESLSEYK 353 >gi|256254732|ref|ZP_05460268.1| hypothetical protein BcetB_10635 [Brucella ceti B1/94] Length = 227 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 3/176 (1%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G +D + + F+ D + +DS ++I+R + + Sbjct: 1 GKSLIDIAGLFVVTPVVAFYMLLDWDRMVNSIDSWVPRKQLHTVRRIAREMNAAVAGFIR 60 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--- 273 G + + G L G+ + +G +++ IP A++I + + Sbjct: 61 GQGTLCLILGTYYAIGLTLTGLNFGLLIGFFAGLISFIPYIGSFVGLALAIGVALVQFWP 120 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + + FI L+P LVG + L + F L G G+ Sbjct: 121 DWIMVCTVAAVFFLGQFIEGNILQPKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 176 >gi|126432772|ref|YP_001068463.1| hypothetical protein Mjls_0159 [Mycobacterium sp. JLS] gi|126232572|gb|ABN95972.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 381 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 114/336 (33%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + +L + L+ PV A ++ P F+ ++ + + Sbjct: 25 RLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVD-FLDRRGAPRGGAVALVLL 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + L F+ + M L +V + RWL + P + ++ + Sbjct: 84 SGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMR---RWLVEGPLDLSREQIDNAGNA 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++++ E + A + + ++ L F G +I + Sbjct: 141 AIEAVRNNQER---------LTSGALSTAGTITEIVTGALLVLFTLIFLLHGGRNIFGFI 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + ++A+ + + +G+ + VP + L + Sbjct: 192 TQVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLALPLASLV 251 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P GA ++ I L+ + A + L+P ++G + + Sbjct: 252 FLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVMGRAVSI 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + GG G++G + +A + + Sbjct: 312 HPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIR 347 >gi|225619332|ref|YP_002720558.1| PerM, putative permease [Brachyspira hyodysenteriae WA1] gi|225214151|gb|ACN82885.1| PerM, Predicted permease [Brachyspira hyodysenteriae WA1] Length = 435 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 123/356 (34%), Gaps = 20/356 (5%) Query: 15 MIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ + L +L+ +K AP + + I + P+ + +K AV+ + Sbjct: 74 IVLILALFTLWVIKEAGYLVAPFIWGIFIAYMFDPLITKMQNKI---PRLAAVLLIYIPL 130 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKV---------VLANQHGIPVPRWLSDIPGGMWASEL 122 + + + +E E++ K + I + L+ G + L Sbjct: 131 LILAIIFVVFILPRTIEQIEVILKTLPQYVDKIYNSISDMLISLSEKLNRTIGKSFDINL 190 Query: 123 WTKHLSHPQSLKILSE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L S T + IDF + + IF + + F+ D Sbjct: 191 EIDSKAINDFLFGNSGVITLMYRKIIDFRFQNINSITTIFSIIFSYFVILPFVTFYLMLD 250 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I ++ + + + I + +I S +GMTI+AI ++ + Sbjct: 251 FQNIKDRIIKIIPMRWQSSVSNIIKNSNYIINSYVVGMTILAISFFIISYILLSVTNTKY 310 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN---ATCLFLWGAIELFIVDKTLR 297 L ++ I+ IP P + ++++ I A + + I + + Sbjct: 311 AFILALLRGILNYIPFIGPFAAFISALFIGIITEPVWWHGALKMCIIYGIIQILDSGIMA 370 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++G +K+ + F + G G LG+ +I + K +K Sbjct: 371 PKILGKSVKIHPIAVMFSTIIGGVLFGFLGVLFAVPFCGIIIITIKNFFNKYYHSK 426 >gi|315657404|ref|ZP_07910286.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491876|gb|EFU81485.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 469 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 110/330 (33%), Gaps = 27/330 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ L + G F P A + P I + A++ V + + + L Sbjct: 64 IIFLLSLIAGVFMPTFLAFSLALAVRPASEWLIRHRWP-VGLAALVNIVLLFAILFIMLG 122 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + EL PR+ G L+ ++ + Sbjct: 123 LIAIAITAMVTEL--------------PRY------GAKFQALYEHAINQLDRRGFDTSA 162 Query: 140 FL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L K I+ I + S F ++ F+I+ F D + ++ L + Sbjct: 163 VLDSWKNVDINRIFSYLSGFANQISGAGTTLFFIIMVAIFVVGDTVVVRRRAAELASYAP 222 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + R +R+ FL T+ LV + GVP+ G++ + IP Sbjct: 223 G--FAIALRNFSLRVRTYFLMTTVFGAVVALVDVGILYAFGVPTPWTWGILAFVANYIPA 280 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G +S + L ++ A +F+ + + L+P + G + L +F Sbjct: 281 VGFILSMIPPILLALALDGVWPAVGVFIGYMVASLLFLNILQPRIAGNAVGLNATVSFLS 340 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ MG LG + L I+ +S Sbjct: 341 LMVWSTVMGPLGAILAVPLTLFFKAIFVDS 370 >gi|86130472|ref|ZP_01049072.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85819147|gb|EAQ40306.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 365 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 122/343 (35%), Gaps = 18/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+L LY ++ + A ++ P+ + S T+ A++ ++ + + Sbjct: 23 ILILLWLLYTIQSVLVYLAVAAVLSLVGRPVVKFLRYTLKFSPTWAAIVTIFILLLVILG 82 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + L I +I + + Sbjct: 83 VFMLFIPVVIDQSQHL---------GQIDFEEVKVNINRLFGEIATYFGLDKMTIIQGVQ 133 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +K IP F + + +I FFF +D + L + + Sbjct: 134 EAELVKNFDFSIIPAFLNGIIGNLGAAGIGTFAIIFITFFFLKDNRLLVNSLLAFAKKGN 193 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + ++ F+G+ I ++ G+ + +A+ + A++ ++P Sbjct: 194 EGKFLRVFEKIKYLLSRYFIGLIIQVFTMFVLYAIILLSFGIDNALAIALFCAVLNLVPY 253 Query: 257 GAPISFTAVSIYLLIKGNI---FNATCL--FLWGAIELF---IVDK-TLRPFLVGGPIKL 307 P+ AV + L+ NI F L LW ++ +VD ++PF+ G +K Sbjct: 254 LGPLVGGAVMLLLVTSSNIEMDFRTIILPKLLWISLCYGAAQMVDNFVIQPFVFGNSVKS 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G+ G+ + + + VI KE + K Sbjct: 314 HPLEIFLAIIIAGLLFGVFGMILAVPVYTALKVISKEFLSEYK 356 >gi|291571975|dbj|BAI94247.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 382 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 116/327 (35%), Gaps = 11/327 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++++ + P+ + S K ++ ++++ L + + ++ Sbjct: 40 IILIMISVVLAASIIPLVNWAQSLKMPR-WLAVIVVYLTLIGGITGLGLIIGPSVVDQIN 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV ++ + + + + ++ G + L ++ + I Sbjct: 99 LLVRQLPIFAERSLDLVSNIASSLGEDIPA------LIDRLVDTQSLTNWVIRSSQQLIL 152 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R + S+I + + D ++ + L + + + V + Sbjct: 153 RSYG-ITRGIVGGVFSLILSLFVSGYMVADSKTLVKSFVQLFPYPWNDRLAAQAVPVGRR 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 I S G I++ G+ + + G+ + LG I +IP PI + Sbjct: 212 IGSYIRGRLIVSAILGVSITTCLGFLGLKDYALGLGAIAGFTNLIPFLGPILGAIPALVV 271 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L KG L L+ I + L P LVG + + L ++ GV+ +GL+G Sbjct: 272 ALAKGGFLFFWVLLLY-VIVQNLETYVLDPLLVGSSVGVHPLYQLLSVLAGVQLLGLIGA 330 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 I P A IA + + + K E+ Sbjct: 331 LIVPPWCAGIAALVENLYLEPKRLAEQ 357 >gi|75906634|ref|YP_320930.1| hypothetical protein Ava_0409 [Anabaena variabilis ATCC 29413] gi|75700359|gb|ABA20035.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 387 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 125/340 (36%), Gaps = 15/340 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + ++ A ++ F +P+ S+++ + +A++ + + + + Sbjct: 36 ISAIFDYFHSLIVILVGASVLAFLLNYPV--SWMAHRGARREQVAILVFLLALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ + T L ++ Sbjct: 94 VTLFPLALTQAQQLVARIPELIDSGRSQLMMLNE--------KAETVGLPINLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I ++ L + ++ F+ + G + Q L F A Sbjct: 146 NDRVKGQLQAIAGQVLNLAVVTFTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPTKFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + R+ ++ F+ I++ L A+ VP + G+ IMA++P G Sbjct: 206 PFSQTVRL---SFQNFFITQLILSTCMASALIPAFLWLKVPFGLLFGLTIGIMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 S-VGIALTTSLVALQDFSMGVRVLIAAVIVQQILENLIAPRILGNFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G R GLLG+ + +I + N+ +++ Sbjct: 322 GARVGGLLGVIVAVPTAVIIKTALTALRPSSVNNETEVTD 361 >gi|228473499|ref|ZP_04058252.1| putative membrane protein [Capnocytophaga gingivalis ATCC 33624] gi|228275106|gb|EEK13909.1| putative membrane protein [Capnocytophaga gingivalis ATCC 33624] Length = 358 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 125/343 (36%), Gaps = 22/343 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ ++LY L+ ++ A ++ P+ + + +T+ V A +M F Sbjct: 20 IVLLALALYKLQNIIIYIVLAAVLALIGRPMVGFLKRRLKFKNTWATVTAIAIIMSFFAG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + K L S + V R+L ++ + + ++ + P+ L I Sbjct: 80 IISLFVPLLISQGKNLAS--IDFKALNDNVHRFLDNLLHSLGMGRIESQVGNIPELLNIE 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 I + F + + + + ++ FFF +DG +IS+ SL + Sbjct: 138 D-----------ISSVLNGFIGVISNIGIGLFSVLFIAFFFMKDGTAISEGFLSLVKPKR 186 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ + ++ F+G+ + ++L + GV + + + A++ +IP Sbjct: 187 LPKVRETLEDIKTILSRYFVGLFLQLSVVFILLTIVLLIFGVKDALIIAFLCALLNLIPY 246 Query: 257 GAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 P+ V L I I T L G +D +P + +K Sbjct: 247 VGPMIGAVVISVLTISNFMDADLQSVILPKTLYVLIGFFFTQFIDNVFSQPIIFSNSMKS 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F + G+ G+ + ++ VI K K Sbjct: 307 SPLEIFIVTLVIGTLFGIAGMVVAIPAYTVLKVILKAVFPNNK 349 >gi|170756779|ref|YP_001782180.1| hypothetical protein CLD_2000 [Clostridium botulinum B1 str. Okra] gi|169121991|gb|ACA45827.1| putative membrane protein [Clostridium botulinum B1 str. Okra] Length = 342 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 119/319 (37%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ F+ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFFISFVIYYILKPIHT-FLKHKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V + ++ I + + E + + G Sbjct: 90 IKEGYNITSSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIG 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F FG LDY + + I +++F G I Q+ + K + Sbjct: 143 ENILNKFVG-FGENILDYAV----IPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMVLAIPIGVIMKIIYED 336 >gi|18310763|ref|NP_562697.1| hypothetical protein CPE1781 [Clostridium perfringens str. 13] gi|18145444|dbj|BAB81487.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 345 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 116/322 (36%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMAIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + +++D+ M EL + + E + Sbjct: 94 KEGESFDGLINGIEF-------FINDLIMKMKFMEL---------GIFDVIEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMVFIVPIAVVIKVLFDDW 339 >gi|301018561|ref|ZP_07182939.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300399680|gb|EFJ83218.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 376 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 41 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 96 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + + F + S++ +++ + F + + ++ Sbjct: 142 LNLHISPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L G+ + V+ + Sbjct: 201 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGLQFALMWAVLAFL 259 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 260 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 319 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 320 MVVFLSLLIWGWLLGPVGMLL 340 >gi|296392986|ref|YP_003657870.1| hypothetical protein Srot_0557 [Segniliparus rotundus DSM 44985] gi|296180133|gb|ADG97039.1| protein of unknown function UPF0118 [Segniliparus rotundus DSM 44985] Length = 385 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 1/200 (0%) Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 WA + + I + ++ + L FF Sbjct: 131 WAEHAGLHFSADQLEKARDTTVHFVQQHRSDITQGVFSTASALVEGVTGFFLALFTLIFF 190 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG SI + L L + K + G +A + + +G + Sbjct: 191 LSDGKSIWEYLTKLVPGESRERVRAAGSSGYKTLIGYVRGTVFVAAADAIGIGVGLAVLR 250 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTL 296 VP + L + + A +P + +V++ + L+ A + + + L Sbjct: 251 VPLALPLASLVFLGAFVPVVGSVLAGSVAVLVALVTQGPLVALLTLILLVAVMQLESHVL 310 Query: 297 RPFLVGGPIKLPFLPTFFGL 316 +P ++G +++ L + Sbjct: 311 QPLVLGRAVRIHPLAVILAI 330 >gi|196234438|ref|ZP_03133264.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] gi|196221494|gb|EDY16038.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] Length = 572 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 79/289 (27%), Gaps = 7/289 (2%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + T+ + L + + K L Q L+ Sbjct: 52 LGCGRGPAVGVVTIISFTVLASVLYVVGAQAVDLAKSLPGYHDNLQQKVFAPLGKLTS-- 109 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 +++ + H + P + + + A L + + + + Sbjct: 110 --AFSAYTRSVHPAKPSDITSEAAQLDLPTSNVNLLSVAKELAGPLLSPIGTAGMVAVYV 167 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF D S+ + L H + + +I G+ +G + Sbjct: 168 IFFLYDRQSLRDRFIHLVSHGRLHLATQALDDAADRVSRYLAAQLLINATYGIPVGVGLY 227 Query: 235 LAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 G+P+ GV+ I+ +P G ++ + I + Sbjct: 228 FIGIPNAPLWGVLAIILRFLPYLGIWIVAAFPFVLSFAISPGWAQPVEVVALFIGVELFT 287 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 + P+L G L + G GL + P+ + L+ + Sbjct: 288 ANVMEPWLYGASTGLSASAIVVSAIFWTWLWGAGGLLLATPLTVCLVVM 336 >gi|262039320|ref|ZP_06012635.1| sporulation integral membrane protein YtvI [Leptotrichia goodfellowii F0264] gi|261746650|gb|EEY34174.1| sporulation integral membrane protein YtvI [Leptotrichia goodfellowii F0264] Length = 299 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 17/232 (7%) Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC----------LSIIFMIIALFFFYRD 180 L +K + FI +S+FG + I +++ FF D Sbjct: 11 GYLPKGFTEQIKNSVAGFISMGSSKFGRFINGLIYFVTSIPTIIIYICITVLSTFFISLD 70 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL----- 235 I L+ + I R + V+ S I+ L ++ + Sbjct: 71 KKEILNFLEQQLPESWLRKVYNIKREMFTVLGSYVKAQIILMTICFFELLISFNILFFLE 130 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + + ++ ++ +P GA + I G+I L L + L V + Sbjct: 131 FNVSYPLLISIVICLIDALPILGAGAVLLPWAGISFILGDIKLGIALILIYLLVLS-VRQ 189 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L P L+ I + L T + G + G++G IGPV+M ++ ++ + + Sbjct: 190 MLEPKLISQNIGVHPLVTLISMYSGFKFFGVMGFLIGPVVMIILKNVFSKEL 241 >gi|269217867|ref|ZP_06161721.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212802|gb|EEZ79142.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 473 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 128/343 (37%), Gaps = 33/343 (9%) Query: 12 MRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 M+ +I+F + + L+ + F P AL + T PI+ I K +L+ I T Sbjct: 59 MKALIVFSLATFGCIGLHEVSNLFGPAFFALTLVLTVRPIHRWLIRK--GLPPWLSAIFT 116 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + F++ ++ L + ++++ + + + + + +L K+ Sbjct: 117 MTALFGFLLGMVGLTVWSLIDLPDTLKSYSGSFKGLVQ------------NVVDLAEKYN 164 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L S+ L D I + + + +++ F D +++ + Sbjct: 165 LSSGKL---SKDLLDNLDFDKIVTAVTTVLEYLTSAGSLLGMISLSMLFITVD--TMTMK 219 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 S + +++ +R ++ +I +V G VP A + Sbjct: 220 FRSKIVYEHDSHFHDALEGFEGRVRQYWIVSSIFGAIVAVVNGIVLAFLHVPMPAAWAIF 279 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP G I ++ L+ A + + ++ ++ +P + G + Sbjct: 280 SFVTNYIPNIGFVIGLVPPALMGLLDSGWLTALWVVIAYSVINSVIQGIFQPKITGDAVG 339 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPV--LMALIAVIWKESIM 347 L TF L+ + IGP+ ++A+ ++ ++++ Sbjct: 340 LSTTVTFLSLL-------FWTVVIGPLGAILAVPLTLFAKALL 375 >gi|42781075|ref|NP_978322.1| hypothetical protein BCE_2006 [Bacillus cereus ATCC 10987] gi|42736996|gb|AAS40930.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 337 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|21222208|ref|NP_627987.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|256786702|ref|ZP_05525133.1| integral membrane protein [Streptomyces lividans TK24] gi|289770597|ref|ZP_06529975.1| integral membrane protein [Streptomyces lividans TK24] gi|10178903|emb|CAC08478.1| putative integral membrane protein [Streptomyces coelicolor A3(2)] gi|289700796|gb|EFD68225.1| integral membrane protein [Streptomyces lividans TK24] Length = 362 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 102/299 (34%), Gaps = 22/299 (7%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+++ + + + A + +V+ + + + + ++V+ + A Q Sbjct: 54 PLHARLVKAHVQR-SLAAGLTCAAVLAVVGGAVYIVVSALVETGDQIVTSLRDAAQG--- 109 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 ++ + + L + L G + + + Sbjct: 110 -------------IADHFGAAGTSLDDLASNARELLGKFGGTAASGVVTGI-SVVGEMIA 155 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + ++ +FFF RD + +L + ++R + G T+IA+ + Sbjct: 156 MAVLALLLVFFFLRDSDRAVTTVRALAPPGGADTVEAVARRAFGAVEGFMRGTTLIALID 215 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + VP V LG + + A IP AV++ L+ + L+ G Sbjct: 216 AFCITVGLLVLRVPGAVGLGALVFVGAYIPYLGAFISGAVAV-LVALADRGFVIALWALG 274 Query: 286 AI--ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + + L+P + +++ L G G+LG+ + P+ A V+ Sbjct: 275 VVLAVQVLEGHVLQPMIQSRTVQMHPAVVLLALTAGASVAGILGMLLAVPLTAAAFGVV 333 >gi|332042026|gb|EGI78364.1| hypothetical protein HGR_01402 [Hylemonella gracilis ATCC 19624] Length = 372 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 115/354 (32%), Gaps = 12/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ I+ +++L+ L P A ++ + P+ + + Sbjct: 1 MPLSTPAKNTLIWGAIVLAFVLALWLLGPVLTPFALAAVLAYVLGPVVERLHRGARKLTG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ + LL L +L + +L Q + R ++ W Sbjct: 61 LDFPRWLLVLLVELLALLLVLGLLLLLVPVLVREWPLLREQLPALLDRL--NVAVQPWLG 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFF 177 +L LK + L N D + G + L ++ + +AL++ Sbjct: 119 QLGVTVSLDLAGLKSVLMKHLGGNLEDSMASLMRSLQIGGSLALTLLGHLVLIPVALYYL 178 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D + + + A +V+ G ++ I + L G Sbjct: 179 LLDWQRLLRLMREWVPPRLHAACDSFVHEADEVLGHYLRGQLLVMIVLAVYYSIGLSLFG 238 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-------KGNIFNATCLFLWGAIELF 290 + + +G+ T + IP +++ + G L + + Sbjct: 239 LDLALPIGIFTGLAVCIPYVGFGVGLLLALLAGLLEFGGMDGGLGRVTLMLTVVYGLGQL 298 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L P LVG I L L F L+ + G +G+ + + A++ V + Sbjct: 299 VESFYLTPRLVGERIGLHPLAVIFALLAFGQLFGFVGILVALPVSAVLLVAARR 352 >gi|284993127|ref|YP_003411682.1| hypothetical protein Gobs_4772 [Geodermatophilus obscurus DSM 43160] gi|284066373|gb|ADB77311.1| protein of unknown function UPF0118 [Geodermatophilus obscurus DSM 43160] Length = 475 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 93/284 (32%), Gaps = 14/284 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + A+ V + + + + +L + + + + Sbjct: 172 RHGWPPVLAALTMLVVGLGTVSGIITLVVQQVVTGFGDLAEQAGQGIEQVRDL--VVRTF 229 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P E L + D + A + + ++ + Sbjct: 230 PVTRTQLENAVTQLQQ-----------TLVDNQDVLASGALTTAVTVGEVATGVLLALFT 278 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFFF +DG SI L L AY + +R + + S +A+ + + +G Sbjct: 279 LFFFLKDGRSIWLWLVGLFPRDSRAYVDEAARRSWRTLISYVRATAAVAMVDAVGIGIGL 338 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GVP + L + + A IP G+ ++ T + L+ A + + Sbjct: 339 AVLGVPLVIPLAALVFLGAFIPIIGSFLAGTVAVLVALVSQGPVTALVALAIVVAVMQLE 398 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L+P L+G +++ L + G+ G+ G I +A Sbjct: 399 GHVLQPLLLGRAVRVHPLAVVLAIAAGLLVAGIFGALIAVPTVA 442 >gi|317063451|ref|ZP_07927936.1| permease [Fusobacterium ulcerans ATCC 49185] gi|313689127|gb|EFS25962.1| permease [Fusobacterium ulcerans ATCC 49185] Length = 333 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 110/324 (33%), Gaps = 2/324 (0%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A+ I P+ S + + I V V+ + + KEL Sbjct: 1 MIYAVFISIFLEPLVSKIEQRFKLERWVAVAIVIVLVIIGVAGFVGLILPQLGKSFKELY 60 Query: 94 SKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +K+ Q G + R L + + + SL + L+ GI + Sbjct: 61 NKLPHMQEQLGSLIKRVLDYLKEKELLVIGEKQIEDNIISLLKRNIGNLQEFGISVLLNI 120 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + + + + + L I L + Y V+ Sbjct: 121 V-WWTIALSKFFIGFFLAVFILLDKEYFIRFIKNILAIIFGKEKGMYLSDFLNQSRNVLL 179 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + G I + G++ +LAGVP + ++ + MIP I A++I+L+I Sbjct: 180 NYVWGRIIASAFVGVITFVVLFLAGVPYALLSSLMIGMGNMIPYVGSIVAGAIAIFLVIL 239 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 LFL I + + P +V + + ++ G MG +G+F G Sbjct: 240 AEPSKIGYLFLAMIIGQTVDGWIVGPKIVSETVGMSTFWVIVAVLIGGSVMGPMGMFFGV 299 Query: 333 VLMALIAVIWKESIMAIKENKEKI 356 +I +I++ + I+ I Sbjct: 300 PAFGIIKLIYETQLKKIENGSTNI 323 >gi|164687897|ref|ZP_02211925.1| hypothetical protein CLOBAR_01542 [Clostridium bartlettii DSM 16795] gi|164602310|gb|EDQ95775.1| hypothetical protein CLOBAR_01542 [Clostridium bartlettii DSM 16795] Length = 401 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 111/341 (32%), Gaps = 11/341 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFI-------SKKEESSTFLAVIAT-VSVMCLFIVP 77 + F + A ++ F + K+ ++++ T ++ + + Sbjct: 59 IMYPFIIGFVLAYLLNFILKFYEERILVNIKYFNKLKQSKKRLISILLTYLTFGIMIYLC 118 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + F+ + +V+++ + + + DI S+ L+ + Sbjct: 119 IHFVLPQLTESIVGIVNQIPHYMEIASKMTQ---DIIKDFDISDQMATFLNDKLNEISTR 175 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + I + L +I + L + + + ++ Sbjct: 176 LIAFISEIVPLIANIIMSLLSSIWNIVLGLIISVYLLLDKEQFYAMSKKMVSAIFNKKTA 235 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 +++ G I + G++ + +A +P V + VI + +IP Sbjct: 236 DRILELTHRSNNTFGRFISGKIIDSAIIGVISFILFAIAKMPYVVLISVIIGVTNVIPFF 295 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P L++ + A + + + + P ++G I + F ++ Sbjct: 296 GPFIGAVPCFILILFESPTKALIFLILIFLIQQLDGNVIGPKILGNSIGISAFWILFAIL 355 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL+G+ IG L A+I I KE++ K + Sbjct: 356 VAGEIFGLVGMVIGVPLFAVIYSIIKENVEYKLREKNLPTD 396 >gi|297270414|ref|XP_001107939.2| PREDICTED: transmembrane protein C9orf5-like isoform 2 [Macaca mulatta] Length = 880 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 650 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 709 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 710 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 769 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 770 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 826 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 827 GPILLCILVV 836 >gi|283455471|ref|YP_003360035.1| hypothetical protein BDP_0542 [Bifidobacterium dentium Bd1] gi|283102105|gb|ADB09211.1| Conserved hypothetical membrane spanning protein [Bifidobacterium dentium Bd1] Length = 499 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 110/353 (31%), Gaps = 23/353 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 ++ P+ + R ++ I + ++ + ++ +L + P+ + Sbjct: 46 DSRRPPEWLGRALLYIAIAIVVFSFCWRSWGQIAYLVMDIVVSLFLALAVEPVVVPLVKH 105 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 F ++ A V + + + ++ +++ + P I Sbjct: 106 -GWKRAFASLFALVLLAVILCTLFGLFGNMFVQQVIAMINGL----------PDLYKQI- 153 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + S+ L SL ++T+ + A + L+++ +++ Sbjct: 154 -CDFVSQYTNFELPEINSLGSEILKNIQTSWVTDFAGTALSTVSGLFSFLLNLMTIVMTT 212 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ G + + + + + I S I+A+ Sbjct: 213 YYISAAGPKLRRAACQWMAPAAQRRFLFVWTVSQGQISSFLFSRAILALLNATFTAICLE 272 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + VP + L + + + IP G I ++ I+ + + + I Sbjct: 273 VLHVPYWLPLALFCGVTSQFIPMLGTYIGGALPVLFAWGNRGIWYGIAVLAFICVYQQIE 332 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P + + + F ++ G LG F+ + A I I++ Sbjct: 333 NLIFAPKISQRTMNINDAVAFLAVLAFGSLFGALGAFLALPVTASIQTIFRTY 385 >gi|306823458|ref|ZP_07456833.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|309802730|ref|ZP_07696834.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022] gi|304553165|gb|EFM41077.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|308220794|gb|EFO77102.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022] Length = 500 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 110/353 (31%), Gaps = 23/353 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 ++ P+ + R ++ I + ++ + ++ +L + P+ + Sbjct: 50 DSRRPPEWLGRALLYIAIAIVVFSFCWRSWGQIAYLVMDIVVSLFLALAVEPVVVPLVKH 109 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 F ++ A V + + + ++ +++ + P I Sbjct: 110 -GWKRAFASLFALVLLAVILCTLFGLFGNMFVQQVIAMINGL----------PDLYKQI- 157 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + S+ L SL ++T+ + A + L+++ +++ Sbjct: 158 -CDFVSQYTNFELPEINSLGSEILKNIQTSWVTDFAGTALSTVSGLFSFLLNLMTIVMTT 216 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ G + + + + + I S I+A+ Sbjct: 217 YYISAAGPKLRRAACQWMAPAAQRRFLFVWTVSQGQISSFLFSRAILALLNATFTAICLE 276 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + VP + L + + + IP G I ++ I+ + + + I Sbjct: 277 VLHVPYWLPLALFCGVTSQFIPMLGTYIGGALPVLFAWGNRGIWYGIAVLAFICVYQQIE 336 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P + + + F ++ G LG F+ + A I I++ Sbjct: 337 NLIFAPKISQRTMNINDAVAFLAVLAFGSLFGALGAFLALPVTASIQTIFRTY 389 >gi|227547834|ref|ZP_03977883.1| integral membrane protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080127|gb|EEI18090.1| integral membrane protein [Corynebacterium lipophiloflavum DSM 44291] Length = 502 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 1/154 (0%) Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FFF +DG + + ++ + I++ + + +G Sbjct: 238 FFFLKDGDQFLPFVRKYSGVRAGWHLTEVLMRSWNTLSGFIRTQAIVSAVDAVFIGVGLI 297 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVD 293 L GVP L V+T IP + A+S+ + L+ NA + L I Sbjct: 298 LLGVPLWPVLVVVTFFAGFIPIIGAFTAGALSVVVALVSNGFTNAILVLLLVIAVQQIEG 357 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+P L + L + G G++G Sbjct: 358 NVLQPILQSRAMGLHAAVVLLSVALGGTLFGIIG 391 >gi|28379647|ref|NP_786539.1| transport protein [Lactobacillus plantarum WCFS1] gi|28272487|emb|CAD65411.1| transport protein [Lactobacillus plantarum WCFS1] Length = 348 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 114/333 (34%), Gaps = 17/333 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 29 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A +++ P + W H L + L T GI Sbjct: 89 DQLKVIPDMLAKA----------ITNHPVLNKNIDKWVNQAIHSSELIQNGKALLVT-GI 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 138 KGLSEVGTGFTHVLMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 ++ +I +++ + + G+PS + L +I I+ ++P G IS + Sbjct: 193 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 252 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ G + + + + L P L+ LP TF L+ +G Sbjct: 253 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 312 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL IG +++ I + +I+ Sbjct: 313 WGLIIGIPIVSFFLDILGVQNSEPRRVTSQIAK 345 >gi|297685074|ref|XP_002820124.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein C9orf5-like [Pongo abelii] Length = 880 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 650 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 709 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 710 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 769 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 770 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 826 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 827 GPILLCILVV 836 >gi|224371796|ref|YP_002605960.1| PerM [Desulfobacterium autotrophicum HRM2] gi|223694513|gb|ACN17796.1| PerM [Desulfobacterium autotrophicum HRM2] Length = 355 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 116/354 (32%), Gaps = 12/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +++ + +P+ ++ + L +Y PVL A+II + + + K Sbjct: 9 VKKNISDPKLFYLFLSISFGLAVIYLFGEMLTPVLVAVIISYLLEGLILQLMRLKVPR-- 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 VSV +F+V L+ + + + +++ Q + + Sbjct: 67 ------IVSVTMVFMVYLIAFTITVIWFIPLISREIIQLFQQLPSMLARAQGQLESLPEH 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +S Q L + L G + F+ + + ++ + +FF +D Sbjct: 121 YPELVTVSQVQELYAFISSSLSAIGKQVLA-FSFSSVKELATFTVYLVLVPFLVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ + V I + G + Y L GV Sbjct: 180 KEMLIGWINRYSPPANDLVT-TVLTAVNLQIANYIRGKGWEVLIIWAGTWVCYHLIGVQY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRP 298 + L ++ I ++P G + F + + + + ++D L P Sbjct: 239 ALLLSFLSGISVILPYIGVTVVFLPTILIGYFQFGWDVRFLYTVSAYSAVQLLDGFILAP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ G + L + ++ GL GLF L L+ + ++ +E Sbjct: 299 LLLAGVVDLHPVVIVIAILFFGNLWGLWGLFFAIPLATLVKALLDIWMVRQRER 352 >gi|148670305|gb|EDL02252.1| RIKEN cDNA D730040F13, isoform CRA_b [Mus musculus] Length = 800 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 570 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 629 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 630 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 689 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 690 TQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 746 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 747 GPILLCILVV 756 >gi|157374839|ref|YP_001473439.1| hypothetical protein Ssed_1700 [Shewanella sediminis HAW-EB3] gi|157317213|gb|ABV36311.1| protein of unknown function UPF0118 [Shewanella sediminis HAW-EB3] Length = 359 Score = 69.9 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 103/323 (31%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ K + LAV+ + Sbjct: 12 KGFAIMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPMIGGLTRLKVPRA--LAVLLMM 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + + E + W Sbjct: 70 VFIVMMGLWLAQIVGSSINEFSTQLPHYRDQLVEQFG-----------------WITGKL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ I E L + ++ +I+ + F + ++ ++L Sbjct: 113 RTFNIIITKEQILAYFDPGIALSMTTNMLSGVGSVMANLFLIILTVVFMLFESETLPKKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++I R + V + + ++++ G+++G+ + GV + GV+ Sbjct: 173 -HFALDDPDMRMQQIDRFLHSVNQYMVIKT-LVSLATGVIIGTGLAIIGVDYALLWGVVA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVMLAFIQLGPAAAGGTALLYLGTNTVMGNVVEPKYMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLL 313 >gi|308181879|ref|YP_003926007.1| permease [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047370|gb|ADN99913.1| permease [Lactobacillus plantarum subsp. plantarum ST-III] Length = 348 Score = 69.9 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 114/333 (34%), Gaps = 17/333 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 29 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A +++ P + W H L + L T GI Sbjct: 89 DQLKVIPDMLAKA----------ITNHPVLNKNIDKWVNQAIHSSELIQNGKALLVT-GI 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 138 KGLSEVGTGFTHVVMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 ++ +I +++ + + G+PS + L +I I+ ++P G IS + Sbjct: 193 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 252 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ G + + + + L P L+ LP TF L+ +G Sbjct: 253 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 312 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL IG +++ I + +I+ Sbjct: 313 WGLIIGIPIVSFFLDILGVQNSEPRRVTSQIAK 345 >gi|296132875|ref|YP_003640122.1| sporulation integral membrane protein YtvI [Thermincola sp. JR] gi|296031453|gb|ADG82221.1| sporulation integral membrane protein YtvI [Thermincola potens JR] Length = 355 Score = 69.9 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 117/350 (33%), Gaps = 11/350 (3%) Query: 11 IMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I ++ II+ Y + + P + A ++ P+ SK + +I+ Sbjct: 5 IKNLFVILIIVSGTYLFYRYILPYIVPFVIAGVLTVFIEPLVRLLQSKAKLPRAPAVIIS 64 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS---ELW 123 + ++ L L + E+ E S + + + L + S L Sbjct: 65 LILIIGLTGTLLTLFVARLVAELIEFSSSLPMYTEMLAKNIVHLRATAESFYFSLPVSLL 124 Query: 124 TKHLSHPQSLKILSETFLKT--NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ +++ +L + + I +IA FF +D Sbjct: 125 EFIANNMGTIEKNIGAYLTQLQAFTKEMLNQFIILVSSVPGILVIIFVSLIATFFMAKDR 184 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + + ++ + V + I+ + P Sbjct: 185 RVIIGFWLRIMPEPWGSKTIQVLKDVSAALFGYARAQLILISITFFNSLIGLAIIDAPYI 244 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + + + +IP G + I+ +I N+ A L + I + I+ + L + Sbjct: 245 LLMAAMIGVFDLIPVLGPGTIYIPWIIWEIINNNVVFAVKLGVV-YIIIVIIRQVLEAKV 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 V + L L T + G++ G LGL +GP+ + + + K I+ Sbjct: 304 VANAMGLHPLATLISIYVGLQIFGPLGLVLGPLFLIGLKALAKAGIVDWP 353 >gi|293400449|ref|ZP_06644594.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305475|gb|EFE46719.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 363 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 112/325 (34%), Gaps = 29/325 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+LS +++ F PI K VSVM ++I L L + + + Sbjct: 45 FLPILSGVLLAFFLQPIIDRVQQKFSLK---------VSVMLVYIGLLAILGAFLAVLLP 95 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L + + Q VPRWL + G + + +L+ + + + + + Sbjct: 96 LLYQQALELAQL---VPRWLQQLEGFLKQHHIAYDNLNTLKQNYMQEGYIIAIDSAKSVI 152 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + +G I FF D + + ++ + + Sbjct: 153 DTLTDYG-----------IAYIIAFFISIDMDFWKRTAKKIVPNV--TRVATFYHTLSNI 199 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIY 268 I G + + + +G L P+ + +I A++ + P G ++ Sbjct: 200 IYQYLAGTMLDLLFIIVSVGIVLSLYRFPNALLYAMILALLNLFPYVGATLGLILIAAVA 259 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + +W I ++P + + + L TF + G++G+ Sbjct: 260 ALHYDHYPWMMFFIVWS--IQQIESNIIQPLIFNRTMNVRPLLTFVFIFISDAFFGVIGV 317 Query: 329 FIGPVLMALIAVIWKESIMAIKENK 353 + P+ A+ ++++ + + +K Sbjct: 318 ILSPIFAAVAQIVFRSYLHSKTSDK 342 >gi|317133678|ref|YP_004092992.1| sporulation integral membrane protein YtvI [Ethanoligenens harbinense YUAN-3] gi|315471657|gb|ADU28261.1| sporulation integral membrane protein YtvI [Ethanoligenens harbinense YUAN-3] Length = 357 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 3/335 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + V + FL G+ P + +I P ++ + Sbjct: 14 NTATFTVAIALGAVLVKFLLGWILPFVFGFLIAAAVQPAVRFAHRHWRLPKRAAGLLLAL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHL 127 ++ + + ++ +V ++ Q + V + + Sbjct: 74 LLILGLLGICAVILARLIMTATPMVQQLPQYLQALVNQVNLTTDSLTNSARSVSPVLAQN 133 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +E + + + + I I++ FF D I Sbjct: 134 ISNMMEGLSTELMKVSTYANQLLALGKSLLASLPNVLFGIAVTILSACFFSMDYDIIRGF 193 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + ++ R + + ++ + L L L +P+ + + V+ Sbjct: 194 LLRQLPERYTDIAVEVKRYFFRSVGGMARAYALLMLITFLELTCGLMLLRIPNAILVAVL 253 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ ++P G +I L+ GNI A L + A + V L P +VG I Sbjct: 254 IAVVDILPVLGTGTIMVPWAIITLLFGNIPLAVGLTVLYA-VIATVRTILEPKVVGDRIG 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L T F + G++ G+ G+ + P+++ ++ + Sbjct: 313 LYPLVTLFAIFLGLKFAGVAGMLLFPLIVLILKRL 347 >gi|251780935|ref|ZP_04823855.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085250|gb|EES51140.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 303 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 112/307 (36%), Gaps = 13/307 (4%) Query: 38 LIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 I+ + PI F SK + +V+ + ++ LFI + + + E+ + + Sbjct: 4 FILAYIIAPIRDLFQSKFKIKKKVASVLIILIILGLFISCITLVIPELVKEISN-IGVIF 62 Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + + + ++ + + L + L N + Sbjct: 63 DNIANFLEDMYIKFRVDSFPILKSIYNELMEKGNILFLNLSKSLFNNIV----------- 111 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + ++ +S + + +++F DG I +L + KKI + KV+ G Sbjct: 112 -LIVENIVSCAVIPVVVYYFLCDGDKIYNKLLFILPTEKREVTKKILNDIDKVLGRYITG 170 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 ++I G + + V + + ++ AI+ +IP PI ++ + + + Sbjct: 171 QVFLSIIIGFLTFILLIIFKVKFPIWISILNAILNIIPYFGPIFGGVPAVLVALLDSPIK 230 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A + + I I L P + + + L+ G + G +G+ + + + Sbjct: 231 ALWVTIGVFIIQQIEGNILSPKITADSTDMHPVMIIILLLIGDKFGGFIGMLLAVPVGVI 290 Query: 338 IAVIWKE 344 I V++ + Sbjct: 291 IKVLYDD 297 >gi|262037961|ref|ZP_06011379.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264] gi|261748002|gb|EEY35423.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264] Length = 355 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 102/333 (30%), Gaps = 16/333 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S+ + G P + + +I ++ P + + + + FI +L Sbjct: 39 SVQIITGTLFPFILSFVIVYSLMPFIDMLNENLKINRKVAISLVLLIFFIFFIYVILAFI 98 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ L+ + ++ ++ + + I S+ + Sbjct: 99 PLVAGQLSSLIEFFIKNQENLQ------------KNLISFMAQNNINIRDSIINSKEVIF 146 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 TN + + S + I L F Y +I + + +L W Sbjct: 147 TNFLKVLNSSVSLL-TGTFSFLFMTPIFTIMLIFSY---DNIDEGIKNLLRKFDREEWIP 202 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + I + ++ G+ ++ + +I +IP P Sbjct: 203 LIKQMDDAIGKYIKVTVLDSLIVGICSYVIFFFLKMEYSSLFSMIIGAGNVIPFIGPFIG 262 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + I I ++P+L + + + T ++ G Sbjct: 263 LIPVILYAATKSFKLVVIIIVLITILQTIEANIIKPWLTSKSVDIHPITTLLVVLIGGAL 322 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G FI + ++ + +K NKE Sbjct: 323 FGIGGAFIAIPVYIVLKLGVIFYFEKLKFNKEN 355 >gi|229818431|ref|ZP_04448712.1| hypothetical protein BIFANG_03738 [Bifidobacterium angulatum DSM 20098] gi|229784301|gb|EEP20415.1| hypothetical protein BIFANG_03738 [Bifidobacterium angulatum DSM 20098] Length = 535 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 100/310 (32%), Gaps = 15/310 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L AL + P+ + +S A+++ V+ V LL + ++ L Sbjct: 83 ILIALFLALAIEPMVKALVSH-GWKRGVAALLSFTVVIVAACVLLLLFGNMFIQQVIALF 141 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 S + + + + ++ L +L ++++ + A Sbjct: 142 SGLPDMYEQT------------RQFIMQRFSFVLPEIDNLGPEILKNIQSSWVSDFAGQA 189 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + + +I+ F+ G + + + + + I S Sbjct: 190 LHTVSGVSAAFIDVTTVIMVTFYISAAGPKLRRSVCQWFAPSAQRRILTVWTVAQDQISS 249 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAV-SIYLLI 271 T++A+ G+ + VP + L + + I++ IP A ++ Sbjct: 250 FLFSRTVLAVLNAACTGAFLVIMKVPYWLPLALFSGIVSQFIPMIGTFVGGAAPVLFACA 309 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + ++ + I + P + + + F ++ G +G F+ Sbjct: 310 NNGLGVGIAVIVFITVYQQIENFIFLPKISQRTMDINEAVAFISVLFFGSLFGAVGAFLA 369 Query: 332 PVLMALIAVI 341 + A I VI Sbjct: 370 LPIAASIQVI 379 >gi|114626082|ref|XP_520176.2| PREDICTED: similar to chromosome 9 open reading frame 5 isoform 2 [Pan troglodytes] Length = 865 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 649 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 708 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 709 GVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 768 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 769 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 825 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 826 GPILLCILVV 835 >gi|108761836|ref|YP_631086.1| hypothetical protein MXAN_2875 [Myxococcus xanthus DK 1622] gi|108465716|gb|ABF90901.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 397 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 111/317 (35%), Gaps = 18/317 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ + +L + + L++ P+ +A++A + Sbjct: 22 TQVLLLILCWAALRAVYPVLTLLAVVLLLSIALSPLVRRLTQWGLPRGAGVAIVALALLG 81 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ + L + +++ LV +P L + A W + LS Sbjct: 82 MMGVL-VGSLVPMLIHQLQGLVQS----------MPAMLERL-----AQSRWVEELSTRY 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +++ +E ++ D R + I +++ +F G + + Sbjct: 126 GVEVQAEDLIRFEPTDVAGRLINVLSSTLGLVAGGITVVVLTVFSLLF-GEDLYESTIQW 184 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + K + + G ++ G V + + GVP + LG++ +M Sbjct: 185 VSPRRRPRVRLLMSRMRKAVANYLAGTLLVMTIGGTVAATIALIQGVPYFLPLGLMVMMM 244 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP G+ IS V + L + +A + + I L P + IK+ L Sbjct: 245 GVIPYLGSIISAVLVGVITLAAVGLKDALIAVVVFIVYQQIESNVLGPMIQRRAIKMNPL 304 Query: 311 PTFFGLVGGVRTMGLLG 327 ++ G GL G Sbjct: 305 LISIVVLCGGALAGLPG 321 >gi|254483129|ref|ZP_05096363.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] gi|214036651|gb|EEB77324.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] Length = 363 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 117/346 (33%), Gaps = 12/346 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + ++ +++ I + L + AP+L+++++ + S S Sbjct: 10 RTYLFEEESVLLLVLLAISVALLVTIGDILAPLLASIVLAYLMQGFSSQLQSH-GAPPWL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + F L L ++ L S++ G + L + ++ ++ Sbjct: 69 GLALSYGVFIGAFFGFTLGLLPLVWRQLMALASELPRYLDQGRQLLSVLPERYPEIFTAD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + Q L T + +P + +I + + +FFF RD Sbjct: 129 QINELVGMAQLEAANMGQMLVTRSLASLP--------GLFTVMVYMILIPMLVFFFLRDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L P ++I + + + G + I G V +A+ G+ Sbjct: 181 EQILDWLAKFLPEKRPLL-RRIWGEMNQQFANYARGKVLEIIVVGSVSYAAFAWMGLNYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG++ + +IP GA + V + G LF + + L P Sbjct: 240 ALLGLLVGLSVIIPYIGAALVTLPVIFVGFFQWGFTTEFYTLFAVYVVIQGLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L + ++ GL G+F L LI I Sbjct: 300 LFSEAVNLHPVAIILAILFFGGIWGLWGVFFAIPLATLIKAIINSW 345 >gi|99081696|ref|YP_613850.1| hypothetical protein TM1040_1855 [Ruegeria sp. TM1040] gi|99037976|gb|ABF64588.1| protein of unknown function UPF0118 [Ruegeria sp. TM1040] Length = 380 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 53/368 (14%), Positives = 124/368 (33%), Gaps = 29/368 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + W I ++ + + L P + I + P+ Sbjct: 2 ALPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIIDPLADRLERAGLSREGAT 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 AVI +V+ I+ LL + + +M +LV + A + + P + Sbjct: 62 AVITVGAVLIFLIL-LLLIVPALINQMIDLVQTLPQALSNLRAFAQ--ERFPSLFEDNSQ 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L+ ++ + + F M L+ + ++ + + + D Sbjct: 119 LREALAGLW-------QIIQDKSVTLLQTFVGS-AMSLLNIVVLLVIVPVVAVYLLVDWD 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++D L + ++ + +V+ S GM ++ + G A L G+ + Sbjct: 171 RMVARIDELLPRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYAVALMLVGLNFGL 230 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF---------------NATCLFLWGAI 287 A+G + ++ IP I ++I L + + G Sbjct: 231 AVGFVAGLVTFIPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQGTDWLRIALVAGIF 290 Query: 288 ELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P LVG + L + L G +G+ + + A+I V+ + + Sbjct: 291 AIGQMVEGNFLTPKLVGNSVGLHPVWLLLALSVFGALFGFVGMLVAVPVAAVIGVVARFA 350 Query: 346 IMAIKENK 353 + ++ Sbjct: 351 VEQYLHSR 358 >gi|326391989|ref|ZP_08213490.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] gi|325991974|gb|EGD50465.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] Length = 336 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 124/343 (36%), Gaps = 20/343 (5%) Query: 16 IMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++F+I+ ++ L F +P L +I + P+ K S F + Sbjct: 3 LLFLIIGAIGLLYFFIKNWVSIKNILSPFLFPSLIAYLLNPM-----VKFFNSKGFSTFL 57 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + V + + +LF +Y + L++++V+ + + L I + + Sbjct: 58 SILLVFLIVALVILFFSFYI---LPLLINEIVIFVKMIPFYTKELQKILIQLKFNYFSYL 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L F S L + +I + I F+ +D Sbjct: 115 PPQFEKVLDKNLNALNNLFASRVDLVFKSTVA--ILKDIIDVIIVPIITFYLLKDKNVFE 172 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++++ + + + + + + K++ ++I + L V +G Sbjct: 173 KEIERMIPSKYHDSFFALLKKIDKILSKYIRAQIYLSIFVAIFTSIGLSLIKVKYAFLIG 232 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ +IP PI ++ + + ++ L + I + + P ++ + Sbjct: 233 ILAGILNIIPYIGPILSIIPAVLIGLLDSLSKGFWALLVCLLVQQIENAFITPKIISDSV 292 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + F L+ G G+ GL + ++A+ VI E + Sbjct: 293 GLHPITVIFSLIAGEELFGVWGLLLSVPVVAIGKVIVTEIFIE 335 >gi|299530278|ref|ZP_07043703.1| putative GAF sensor protein [Comamonas testosteroni S44] gi|298721649|gb|EFI62581.1| putative GAF sensor protein [Comamonas testosteroni S44] Length = 808 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 115/346 (33%), Gaps = 10/346 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E + + ++ MI I++++LYF + P+ A++ GF P S K+ Sbjct: 16 LAEMLPALRLLIGLMIASIVILALYFGRDMLIPLALAMLFGFLLDPAVSKL--KRWGLPR 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP----GG 116 + I V+ + L + ++ + + + R +++P G Sbjct: 74 MASAIVVVAFSLAALGGLGMYLGSQVQQLSADLPTYQSTIRDKLRSLRKSANMPSAWDGV 133 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 K ++ S + + ++ + + +++ + Sbjct: 134 FKTYNTVEKEIASVDSARARVQKVEVQPPESKPTTRMLQWLGRIAEPVTTAGIVLLFVIL 193 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + +L L + + I I+ + G+ L L Sbjct: 194 ILLDRDELRDRLLRLVGGNLNVATDALDE-ASQRIGKYLRMQFIVNVSYGVPLAMGLLLI 252 Query: 237 GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + GV+ AIM +P P+ + +++ + + + I + Sbjct: 253 GVPGAILWGVLGAIMRFVPYVGPMMSAVFPLALAFAVDPSWDMFLMTLGLILLLELISNN 312 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + P+L G L L G +GL + P+ + L+ Sbjct: 313 VIEPWLYGSSTGLSTLSIIVAATFWTALWGPIGLILSTPLTVCLLV 358 >gi|114329061|ref|YP_746218.1| hypothetical protein GbCGDNIH1_2397 [Granulibacter bethesdensis CGDNIH1] gi|114317235|gb|ABI63295.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 678 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 2/169 (1%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 S + I F + ++ L + FL + Sbjct: 234 LASTGIVFIVAIFMLMRLEDLRDRMIRLFGSSDLHRTTLAMDDAASRLSRYFLAQLGLNA 293 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 GL+ G W+ GVPS GVI +M +P I L + + L+ Sbjct: 294 AFGLITGLGLWMIGVPSPALWGVIAGLMRFVPYIGTPLAAIPPIALAAAVDPGWSMALWA 353 Query: 284 WGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + ++ + + P L G L L + G +GL + Sbjct: 354 AGMFLVAESLMGQVVEPLLYGHSTGLSPLAVMLSAIFWTWLWGSIGLIL 402 >gi|254417043|ref|ZP_05030790.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196176210|gb|EDX71227.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 339 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 117/344 (34%), Gaps = 11/344 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + L+ +K +A++ T + F+ + F +I+ Sbjct: 5 SLLGLFLFILSVYILWKIKTVILLGFAAVVFATTLNRL-VRFLLRFRLKRAFAIIISVGF 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + + ++++L+ V + Q W+ ++ + + Sbjct: 64 CLGLLSGFFVLVVPPFIDQVQQLIDLVPIGLQQIPEWANWVRNLVPDGLLDD-----IGG 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ +F F S G++ + ++ ++ + + Sbjct: 119 LNVFTQNLRSWVTKLFGNFFDIFYSSIGLVLNMLLVVVVTIM-----LLANPEPYRRGFI 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + ++I + +G+ ++ G W+ V +A G++ Sbjct: 174 LLFPAFYRRRIQEILDECEDTLGGWAVGILFNMTVIAILSGLGLWILQVQLPLANGLLAG 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I IP P + L + + + A + + + I L P ++ + L Sbjct: 234 IFTFIPNLGPTLSVIPPVALALLDSPWKALAVVILYIVIQQIESNILTPLVMQKQVSLLP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G+ GLF+ ++ + V KE ++ NK Sbjct: 294 AVTLLSQMAFAIFFGIFGLFLALPIVVVAQVCLKEVLVKDILNK 337 >gi|304397899|ref|ZP_07379775.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304354610|gb|EFM18981.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 351 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 121/337 (35%), Gaps = 22/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ ++ IIL + P+L A P+ + + + + Sbjct: 11 QNILIKLAMLVIILAGVRAASDILVPLLLAAFFAIVLNPLVTMLMRR-GFRRGLAIGLVI 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + C ++ L + M E +L ++ + + V +HL Sbjct: 70 TVIFCALVL-LGAIIASSMSEFSDLYPQLRATMEQKMTV-----------------LQHL 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + I ++ ++ + + AS F + + +++ + F + + + Sbjct: 112 AAGFHINISTDALVQRFDPNTMMNLASVALSGFSGAMTNTVLLVLTVVFMLFEVHHLPYK 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + P K + T++++ G+ + + +L V + GV+ Sbjct: 172 MRNAL--VNPKIRIAGLHKALKGVTHYLALKTLVSLITGIAVWLSLYLLDVKFALLWGVV 229 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ IP G I+ + L+ ++F+A + + L P L+G + Sbjct: 230 AFILNFIPNIGPIIAGIPPLLQALLLNSLFDAAMVAALFTAIHMVFGNMLEPRLMGRGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L F LV +G +G+ + L ++ ++ + Sbjct: 290 LSTLVVFLSLVFWGWLLGPVGMLLSVPLTSITKILME 326 >gi|218896894|ref|YP_002445305.1| hypothetical protein BCG9842_B3416 [Bacillus cereus G9842] gi|218541176|gb|ACK93570.1| putative membrane protein [Bacillus cereus G9842] Length = 337 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F + + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRELKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYVLST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|149374547|ref|ZP_01892321.1| hypothetical protein MDG893_10881 [Marinobacter algicola DG893] gi|149361250|gb|EDM49700.1| hypothetical protein MDG893_10881 [Marinobacter algicola DG893] Length = 357 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 103/332 (31%), Gaps = 9/332 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + IL +LY P++ A++ +P+ K +++ + V+ Sbjct: 20 LFALGILYTLYVAHQIVLPIVLAVLTSLLLFPLVKKAYDKAGIPRALSSLVLMIVVI--- 76 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L G + A Q + S I + K + Sbjct: 77 ----AGLAGVGAAVATPALEWAQQAPQGISRLLMGESGIKNQIDKVNESAKKVEESMDEL 132 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 E + + ++ + + + +F G I Sbjct: 133 SKDEKTTTNTVVLKTDSWRNQLLTKARNGAAGLALALALTYFLLVGGDRIILNFVRQLPK 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I+R + I +++ + G+ G W G+P G++ + I Sbjct: 193 RQRRNVLQIARDSQQQIAQYLAVLSLSNLLVGITTGLICWAVGLPDPAVWGLVAGLARFI 252 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKLPFLPT 312 P G ++ +++ + + G + L V + P++ G + + + Sbjct: 253 PYLGVILTIILLAVVSATSLDTLWTMAIAPLGYLALTSTVGFFIEPWIHGFRMAINPVVI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F + G +G+ + LM +I V+ K+ Sbjct: 313 FVSIFFWGWLWGPVGVLLAVPLMTIIQVVLKQ 344 >gi|188589458|ref|YP_001920393.1| putative domain of unknown function [Clostridium botulinum E3 str. Alaska E43] gi|188499739|gb|ACD52875.1| putative membrane protein [Clostridium botulinum E3 str. Alaska E43] Length = 382 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 117/327 (35%), Gaps = 5/327 (1%) Query: 24 LYFLKGFFAPVLSALIIGFT--SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + + F A I+ F + + SK + V ++ M L + + F+ Sbjct: 44 IVIFQPFIIGFSIAYILNFILKFYEKKLNVHSKLKSKRGLGLVFTYITAMLLIGLFIQFV 103 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + LV+ V ++++ + + SE + +++ + I + Sbjct: 104 LPQLIQSIIGLVNDVPKFINEST---KFINKLMLDLNISEEYLPLINNNFNEFINYIIKI 160 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 TN + + F ++ + L +I I L + + ++ Sbjct: 161 ATNLLPVLGGFVTKIASSIWNIVLGVIISIYLLIDKEKFCAMSKKVTYAIFYKNAAEKII 220 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I+ +G + + G++ + +P + + VI I +IP P Sbjct: 221 EITHRSNDTFGKFLMGKILDSFIIGILTFVILTIFRMPYAILISVIIGITNIIPFFGPFI 280 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 S +++ A + + I + P ++G I + F ++ + Sbjct: 281 GAIPSFIIILFVAPVKALWFLVIILVIQQIDGNIIGPKILGDSIGISAFWILFSILFAGK 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 +GL+G+ IG L A++ I KE + A Sbjct: 341 FLGLIGMIIGVPLFAVVYSIIKEIVEA 367 >gi|255527126|ref|ZP_05394013.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296186586|ref|ZP_06854989.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|255509177|gb|EET85530.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296049033|gb|EFG88464.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 383 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 78/194 (40%) Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 +++ L +IF I L G + L + + +I ++ + G I Sbjct: 186 VEFILGVIFAIYILAQKRSLGIQFKKLLYAFMKKEKVDSILEILKLTNLTFSNFITGQCI 245 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +A G++ L +P + + V+ +++IP ++ + L++ N A Sbjct: 246 VAAILGIMFFIIMMLLSMPYALMISVLICSLSIIPVLGSAIGCSLGVILILMVNPIKAGV 305 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + I D + P +VG + LP + + G + G+ G+ I + ++ V Sbjct: 306 FLIVFLLIKQIEDNFIYPKVVGESVGLPAIWVLVAITLGGKISGVAGMIIFIPMFSVAYV 365 Query: 341 IWKESIMAIKENKE 354 + ++ + + K+ Sbjct: 366 LLRKEVYIRLKGKD 379 >gi|168214258|ref|ZP_02639883.1| putative domain of unknown function [Clostridium perfringens CPE str. F4969] gi|170714314|gb|EDT26496.1| putative domain of unknown function [Clostridium perfringens CPE str. F4969] Length = 345 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 115/322 (35%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + +++D+ M EL + E + Sbjct: 94 KEGESFDGLINGIEF-------FINDLIMKMKFMEL---------GFFDVIEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGDQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMIFIVPIAVVIKVLFDDW 339 >gi|298346096|ref|YP_003718783.1| hypothetical protein HMPREF0573_10970 [Mobiluncus curtisii ATCC 43063] gi|304390145|ref|ZP_07372099.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236157|gb|ADI67289.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326627|gb|EFL93871.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 469 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 110/330 (33%), Gaps = 27/330 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ L + G F P A + P I + A++ V + + + L Sbjct: 64 IIFLLSLIAGVFMPTFLAFSLALAVRPASEWLIRHRWP-VGLAALVNIVLLFAILFIMLG 122 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + EL PR+ G L+ ++ + Sbjct: 123 LIAIAITAMVTEL--------------PRY------GAKFQALYEHAINQLDRRGFDTSA 162 Query: 140 FL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L K I+ + + S F ++ F+I+ F D + ++ L + Sbjct: 163 VLDSWKNVDINRVFSYLSGFANQISGAGTTLFFIIMVAIFVVGDTVVVRRRAAELASYAP 222 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + R +R+ FL T+ LV + GVP+ G++ + IP Sbjct: 223 G--FAIALRNFSLRVRTYFLMTTVFGAVVALVDVGILYAFGVPTPWTWGILAFVANYIPA 280 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G +S + L ++ A +F+ + + L+P + G + L +F Sbjct: 281 VGFILSMIPPILLALALDGVWPAVGVFIGYMVASLLFLNILQPRIAGNAVGLNATVSFLS 340 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ MG LG + L I+ +S Sbjct: 341 LMVWSTVMGPLGAILAVPLTLFFKAIFVDS 370 >gi|164688257|ref|ZP_02212285.1| hypothetical protein CLOBAR_01902 [Clostridium bartlettii DSM 16795] gi|164602670|gb|EDQ96135.1| hypothetical protein CLOBAR_01902 [Clostridium bartlettii DSM 16795] Length = 391 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 121/348 (34%), Gaps = 10/348 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I I L ++ F A I+ + K L+++ T + L I Sbjct: 48 IFGIFTNILSIVEPFLVGATIAFILSI----PMNFLERKFPRLKRPLSLLLTFLIFILVI 103 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L+FL +++ + V + + ++I W + QS+ Sbjct: 104 LVLVFLIGPKLIDTITNIVNTVPESVESLRKLLQDTNINW-DWVQDYLASIEIDWQSISN 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +F K + + +S I I + +S QL L Sbjct: 163 KVLSFFKDSFSSLF-TSTFGVVTGVVSTIISTIISFIFAAYILISKEKLSVQLKKLLYAF 221 Query: 196 FPAYWKKISRIVPKVIRSTFLGMT----IIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 P V K+ TF I + G + + +P + + V+ IM Sbjct: 222 LPEKIVDKMVEVGKLTHKTFTNFFTYQCIECLILGSMFFVTMVILKIPYALLISVMITIM 281 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP ++ L++ N + A+ I + P +VG I LP + Sbjct: 282 ALIPIFGLCIAFIIASILIVMVNPIKVIVFAILFAVLQQIEGNLIYPRVVGKSIGLPPIW 341 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F + G + MG++G+ + L ++I + ++S+ +N++ + Sbjct: 342 VIFVITLGSKLMGIVGMILFIPLSSVIYTLLRKSVYKRIQNRKIPNDK 389 >gi|88802618|ref|ZP_01118145.1| hypothetical protein PI23P_08510 [Polaribacter irgensii 23-P] gi|88781476|gb|EAR12654.1| hypothetical protein PI23P_08510 [Polaribacter irgensii 23-P] Length = 360 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 115/343 (33%), Gaps = 20/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+ L+ ++ ++ A I+ + P+ ++ + +T + + ++ Sbjct: 20 IFLCGAFLFTIQSVIFYIIIAGILSLIARPVILFLCTRLKFPNTLAVIFTMLLLLSFLSG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + K L V Q + +E+ + LS + Sbjct: 80 LIVLFIPLIAEQGKSLSLLEVDDLQASVQ-----------EIYAEINSYFLSKGIDVLNE 128 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + IP F + + + ++ FFF +D + + +L Sbjct: 129 LKNIDLLASFKEIPNFLNAVLEAIGSLSVGLFAVLFISFFFMKDRHLLKNGMMTLIPTGK 188 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + K + ++ F+G+ + + + + + + A++ +IP Sbjct: 189 EGRFSKSLEAINSLLSRYFIGLLSQITILYFFYALILLVFDIDNALVIAFLCALLNLIPY 248 Query: 257 GAPISFTAVSIYLLIKGNIF--------NATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 PI + L + NI + L+ + +VD + +P + K Sbjct: 249 VGPIIGAVIMFILSMTSNIGLDFQTEMLPTSIWILFWYLMAQLVDNFVSQPLIFSKTTKS 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F +V G G+LG+ + + VI KE + K Sbjct: 309 HPLEIFLIIVIGGLLFGILGMIAAVPMYTALKVILKEFLSDNK 351 >gi|264677725|ref|YP_003277631.1| GAF sensor protein [Comamonas testosteroni CNB-2] gi|262208237|gb|ACY32335.1| putative GAF sensor protein [Comamonas testosteroni CNB-2] Length = 808 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 115/346 (33%), Gaps = 10/346 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E + + ++ MI I++++LYF + P+ A++ GF P S K+ Sbjct: 16 LAEMLPALRLLIGLMIASIVILALYFGRDMLIPLALAMLFGFLLDPAVSKL--KRWGLPR 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP----GG 116 + I V+ + L + ++ + + + R +++P G Sbjct: 74 MASAIVVVAFSLAALGGLGMYLGSQVQQLSADLPTYQSTIRDKLRSLRKSANMPSAWDGV 133 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 K ++ + + + ++ + + +++ + Sbjct: 134 FKTYNTVEKEIASVDNARARVQKVEVQPPESKPTTRMLQWLGRIAEPVTTAGIVLLFVIL 193 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + +L L + + I I+ + G+ L L Sbjct: 194 ILLDRDELRDRLLRLVGGNLNVATDALDE-ASQRIGKYLRMQFIVNVSYGVPLAMGLLLI 252 Query: 237 GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GVP + GV+ AIM +P P+ + +++ + + + I + Sbjct: 253 GVPGAILWGVLGAIMRFVPYVGPMMSAVFPLALAFAVDPSWDMFLMTLGLILLLELISNN 312 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + P+L G L L G +GL + P+ + L+ Sbjct: 313 VIEPWLYGSSTGLSTLSIIVAATFWTALWGPIGLILSTPLTVCLLV 358 >gi|291619296|ref|YP_003522038.1| YhhT [Pantoea ananatis LMG 20103] gi|291154326|gb|ADD78910.1| YhhT [Pantoea ananatis LMG 20103] gi|327395624|dbj|BAK13046.1| UPF0118 inner membrane protein YhhT [Pantoea ananatis AJ13355] Length = 351 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 129/344 (37%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +++ + +++ ++ IIL + P+L A P+ + + + Sbjct: 4 LQQEKIGQNILIKLAMLVIILAGIRAASDILVPLLLAAFFAIVLNPLVTILMRR--GLRR 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA+ ++V+ + I+ L + M E +L ++ + + V Sbjct: 62 GLAITLVITVIFIVILLLGAILASSMSEFSDLYPQLRTIMEKKMAV-------------- 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +HL+ L I ++ ++ + + AS F + + +I+ + F + Sbjct: 108 ---VQHLAASIHLNISTDALVQRFDPNTVMNLASVALSGFSGAMTNTVLLILTVVFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ + + P K + T+I++ G+ + +L V Sbjct: 165 VHHLPYKMRNSF--VNPKIRIAGLHKALKGVTHYLALKTLISLITGIAVWLTLYLLDVKF 222 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ I+ IP G I+ + L+ ++F+A + + L P Sbjct: 223 ALLWGVVAFILNFIPNIGPIIAGIPPFLQALLLNSVFDAAMVAALFTAIHMVFGNMLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L ++ ++ + Sbjct: 283 IMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTSITKILME 326 >gi|217978311|ref|YP_002362458.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] gi|217503687|gb|ACK51096.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] Length = 653 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 45/364 (12%), Positives = 107/364 (29%), Gaps = 27/364 (7%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ + MI + +++LY K F P+ A+++ F + + + + Sbjct: 16 RDATRTLDTLATLMISALCILALYVAKSVFVPIAIAVLLSFVLS-LPVRLLRRIGLNRVV 74 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I ++ + + + ++ EL + L ++ E Sbjct: 75 AVLIVVIASLAV----TFAISAALTRQVTELAVDLPKYQATITSKAGSLREMVFANGLME 130 Query: 122 LWTKHLSHPQSLKILSETF-------------------LKTNGIDFIPRFASRFGMIFLD 162 +L + ++ + + G Sbjct: 131 KGASIFKGLGALGQKKDDAASAPPALGRGDEPRPIPVEVREAEPSPLSMLQTIVGTALSP 190 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 I +I +F + ++ + +G ++ ++ R + A Sbjct: 191 LETIAIVVIFVIFILLQREDLRNRFISLVGTRDLQRTTVAMNDAAGRLSRFFLAQTLLNA 250 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATC 280 G+V+ + GVP + G+I +M +P I V++ + A Sbjct: 251 AF-GVVVAVGLYAIGVPGPLLFGMIGFLMRFVPYIGAIVAAGLPVALAAAVDPGWTMALE 309 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + V + + P L G L + G +GL + L + V Sbjct: 310 TLALFLVLELAVGQFIEPLLYGRNTGLSPIAVVVAATFWTWLWGPIGLVLATPLTVCLVV 369 Query: 341 IWKE 344 + + Sbjct: 370 LGRH 373 >gi|116333210|ref|YP_794737.1| permease [Lactobacillus brevis ATCC 367] gi|116098557|gb|ABJ63706.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 347 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 120/334 (35%), Gaps = 23/334 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + ++++ + + F + L +I + + ++ + + + Sbjct: 17 YFALILLIILAWNARAFLSLALFTIIFIYLGNAATMGLEHRLHVHHLIATLLVYLIFLGI 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + E+ L + + + L+ W K+L+ S+ Sbjct: 77 LVAAFAQIIPPLVTEVSRLPNTLKELVTTYPQLETTLTR----------WIKNLTQNASV 126 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +T L T+GI + RF+S + L + S IF + + + + + Sbjct: 127 INNGKT-LFTSGIVKLSRFSSGVETVILAFFFSFIFNLTKT--------QLRHFVHAFTK 177 Query: 194 HLFPAYW---KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F + ++ + + +I +++ WL G+PS + LG++ Sbjct: 178 SRFSRLFVPMGELILKFVTIFGTVIETQLMICSINTVLMVIGLWLVGMPSLLILGIMVFF 237 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP G IS ++I I G I + + + L P L+ LP Sbjct: 238 LGLIPVAGVLISLIPLTIIAFISGGILRLAAVLVLVILIHLFESYFLHPRLMANATNLPI 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 TF L+ R G GL +G L+A ++ Sbjct: 298 FVTFITLIVSERLFGAWGLIVGVPLVAFFLEVFD 331 >gi|297538926|ref|YP_003674695.1| hypothetical protein M301_1740 [Methylotenera sp. 301] gi|297258273|gb|ADI30118.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 386 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 119/348 (34%), Gaps = 8/348 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +++ + + ++ +L + + F +L +++ +T P+ K Sbjct: 23 NDSIQVKNVALVILTTIAVIFALDWAQNFVITLLFGILLSYTLNPLVKWLEYIKIPRIVG 82 Query: 62 LAVIATVSVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGMW 118 +++ ++ + ++++ E+ +K+ A + P + + Sbjct: 83 SSIVILTLILSIGFAGFTLRGQVQSIIVQLPEVTTKLTAAFETKRGEPLTDMQKVQIAAS 142 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDF-IPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E T +++ + K S + + F I F R + I M +F Sbjct: 143 QVETATNSVTNAVASKKSSSMHVVIDDHKFKIGDFLWRGSLGIFGVVGEAITMAFLAYFL 202 Query: 178 YRDGFSISQQLDSLGEHLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 G + ++L L I + I+ + I + GL + + + Sbjct: 203 LLSGDTFKRKLVHLTGPSLSRKKITVHILEDINNSIQRYMFMLLITNVMVGLSMWVLFRM 262 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVD 293 G+ + A V + ++P P+ + G+ A + + IV Sbjct: 263 IGLENAGAWAVFAGFLHVVPYFGPVVTAGATGIAAYMQFGSTSTAVLVAGMTMLVATIVG 322 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L ++ G K+ F L+ G+ G+ +G L+ +I VI Sbjct: 323 VFLTTWMTGRIAKMNSAAVFISLLFFTWLWGVWGMLLGIPLIVIIKVI 370 >gi|12002680|gb|AAG43365.1|AF153415_1 chromosome 9 open reading frame 5 [Homo sapiens] Length = 911 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 649 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 708 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 709 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 768 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 769 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 825 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 826 GPILLCILVV 835 >gi|289551168|ref|YP_003472072.1| hypothetical protein SLGD_01857 [Staphylococcus lugdunensis HKU09-01] gi|315658669|ref|ZP_07911539.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590] gi|289180700|gb|ADC87945.1| hypothetical protein SLGD_01857 [Staphylococcus lugdunensis HKU09-01] gi|315496300|gb|EFU84625.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590] Length = 361 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 38/330 (11%), Positives = 106/330 (32%), Gaps = 12/330 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +LS + + + + K ++++ + V + F+ + + Sbjct: 41 FLPFILSGFLFYICL--PFQTLLEKFGFPRWASITTIFIALIAIVAVVVAFIAPIIISNV 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + + + + T +++ + + N + +I Sbjct: 99 NSLIHAIPTIQNDVERIINF--SLKQMDKLPSDVTTRINNTVKSLGDGVSDVLANSLSYI 156 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F S ++ + L + +D + + + + + + Sbjct: 157 TSFISTI--------FLLVMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFAVGLLQDLNF 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++S G +++ G++L Y + G+P L + + +IP P A + L Sbjct: 209 TLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFAPAGIL 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 I + + + I + + P ++G + + L ++ G + Sbjct: 269 GIIDSPTTFIWVCIVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLIL 328 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A++ + +K +S+ Sbjct: 329 IAVPLYAVLKTVASNIFKYRTRIMDKANSD 358 >gi|73666828|ref|YP_302844.1| hypothetical protein Ecaj_0196 [Ehrlichia canis str. Jake] gi|72393969|gb|AAZ68246.1| protein of unknown function UPF0118 [Ehrlichia canis str. Jake] Length = 373 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 143/352 (40%), Gaps = 14/352 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + R +I+ II+++++ +K FAP SA+I+ + P+ + + S F + Sbjct: 10 DKYVTRGVIILIIILAIFIIKPVFAPCCSAIIMAYLLNPLVNKLQN-IGLSRQFSVAVIL 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ--HGIPVPRWLS--------DIPGGM 117 +S +C+ I L+ ++ LV ++ H + +L ++ M Sbjct: 69 LSSVCIIIAFLISFIPIAYSQLLSLVRFLIERIPLIHKDSITAFLQKYNIVEYEEVSNVM 128 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI-IALFF 176 S+L ++L +++K L + F + I + Y +SII + I LF+ Sbjct: 129 RLSQLSFENLLSYENIKPLIGVLVGILKSLDNILFGAINSSISISYTVSIILITPILLFY 188 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + SI + +SL + + K + + K+I + G + G+ L Sbjct: 189 ILCNWPSIVEYSNSLIPVKYQSVAKLYTERIDKIISAYIRGQLSVCFIMGIYYTICLSLI 248 Query: 237 GVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + + +G I+ IM IP PI + I +L + + + I + Sbjct: 249 KLKYFLIIGFISGIMTFIPYVGPISCVVLSFVITMLQFNSWTICGIVLVMFIIGQLVESN 308 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + P L+G I + + G++ +G G+ + + A++ V K I Sbjct: 309 IITPLLIGKSIDIHPIWIIIGMITCGSQIGFTGILLSIPITAIVGVFVKSFI 360 >gi|71152403|sp|Q9H330|CI005_HUMAN RecName: Full=Transmembrane protein C9orf5; AltName: Full=Protein CG-2 Length = 911 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 649 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 708 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 709 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 768 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 769 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 825 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 826 GPILLCILVV 835 >gi|17547343|ref|NP_520745.1| ABC transporter permease [Ralstonia solanacearum GMI1000] gi|17429646|emb|CAD16331.1| probable permease transmembrane transport protein [Ralstonia solanacearum GMI1000] Length = 356 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 107/316 (33%), Gaps = 10/316 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P + A I+ + P + + + + + + +L + E+ Sbjct: 35 TPFVFAGILSYILHPGVEWLQRHRVPR-VLGVFLMILLLTVVAVALMLLILAVLQREIPA 93 Query: 92 LVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + ++ + ++ V L+++ + + L Q + Sbjct: 94 IREQLPGMLSKLNAAVTPRLAEMGVHVRFDFPGLRKLLTEQLAASPEDVMSTA------L 147 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + G + + + I +F+ D + ++L+ + + ++++ + Sbjct: 148 NYLRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLIRRLEGAVPRRWISKTRELAAETDGL 207 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIY 268 + G I+ + + LAG + +G+ T + IP A+ Sbjct: 208 LSQYLRGQIIVMLVLAAYYSAGLALAGFDVALPIGIFTGLAVFIPYIGFGIGLILAILSA 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LL GN++ + + + + L P LVG I L L L+ + G G+ Sbjct: 268 LLQFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGERIGLHPLAVILALLAFGQLFGFFGI 327 Query: 329 FIGPVLMALIAVIWKE 344 + + A++ V ++ Sbjct: 328 LLALPISAVLLVGLRQ 343 >gi|91781893|ref|YP_557099.1| hypothetical protein Bxe_A3952 [Burkholderia xenovorans LB400] gi|91685847|gb|ABE29047.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 383 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 111/319 (34%), Gaps = 8/319 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P L I+ + P + + ++ A++ + L + +L + Sbjct: 58 SPVLTPFLLGAILAYILQPGVAWMVRRRVPR-GLAALVMMLFFTLLMTLLVLLVLAVVQK 116 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E +L +V + H WL P + + + + + Sbjct: 117 EGPQLRQQVPVLFAH---ANAWLQ--PKLALLGLADSLDFASIRDMVMGQLEGSAQTVAL 171 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + + +++ + + LF+ D + ++ ++ + +++ + Sbjct: 172 YAWTSIRTSGNVMITVVGNVVMVPLVLFYLLYDWNRMLARMQTVVPRRWLDKTLQLAHDM 231 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAV 265 +++ G ++ A LA + +G+ T + IP G A A+ Sbjct: 232 DQMLSQYLRGQLLVMGVLAAYYAIALSLARFEIALPVGIFTGLAVFIPYIGFATGLALAL 291 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 LL G+ + + L + + L P LVG I L L F L+ + G Sbjct: 292 LAALLQFGDWYGFGAVALIYGVGQILESFFLTPRLVGERIGLHPLAVIFALLAFGQLFGF 351 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + A+++V +E Sbjct: 352 FGVLLALPVSAILSVATRE 370 >gi|324325982|gb|ADY21242.1| hypothetical protein YBT020_09980 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 337 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 121/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIVLIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|219854560|ref|YP_002471682.1| hypothetical protein CKR_1217 [Clostridium kluyveri NBRC 12016] gi|219568284|dbj|BAH06268.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 346 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 109/319 (34%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ +L + +I +T PI + K S A I V I L Sbjct: 35 VLREIIYLILISFLISYTLKPI-QKIMVNKGISEKISAFILIALVGLFIISIFAILIPSL 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E L + + + L I G L +++ T + T Sbjct: 94 FKESLSLNNAIYSIQNLVDNIYGKLKLIQGNRTIHVL----INNFNRKIDGEVTVMFTRI 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D + + L ++ + + ++F +G I++++ S K IS Sbjct: 150 FDSLMKMGQNI--------LYVVVIPVITYYFLSEGECINEKVLSTFPIKSRGIIKNISC 201 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 K++ + +++ G+V + V + L V+ A +IP PI Sbjct: 202 HADKILGRYIISQLMLSGFIGIVTFFILLILKVDFPIILSVLNAFFNIIPYFGPIFGAIP 261 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + + A + + I L P + I + L L+ G G Sbjct: 262 AIAIALIESPEKAIWTAICLYVLQQIEGNILSPKVTADSISMHPLVVILLLIIGGEIAGF 321 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + L +I V++++ Sbjct: 322 IGMVLAVPLGVIIKVMYED 340 >gi|126661126|ref|ZP_01732206.1| hypothetical protein CY0110_09575 [Cyanothece sp. CCY0110] gi|126617602|gb|EAZ88391.1| hypothetical protein CY0110_09575 [Cyanothece sp. CCY0110] Length = 340 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 104/316 (32%), Gaps = 22/316 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P+ A + +P+ + K +L++I + V+ + L Sbjct: 28 QPISMPLAFAFFLVVLVYPLQNKLEQKL---PRWLSLIIVLFVLGGVVA-LAQGALSLSA 83 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E+ E +P++L + + W + P F N Sbjct: 84 EIIE------------PKIPQYLDRLEQMWTVIKSWASNYGLPVPQFN----FQNNNTPI 127 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + A FL +I I L + +++ + Sbjct: 128 QLTQQALSGLQTFLSTVSLLILTISLLILLLLEVNQYKRKVQQAFPSRTSQHIINAVGNT 187 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 + +R MT I G++ G + GV + G+I I+ +P G+ I+ + Sbjct: 188 SEKLRRYLTVMTFTCILTGVLTGIWCLIIGVDLALVWGLIAFILNYVPTIGSIIAVIPPT 247 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L+ + + I I+ + P + G ++L F +V G+ Sbjct: 248 LIALLFNGVPRGIATVIGLGIIQVIMGNFVDPRIQGKTLQLSPFIALFSIVFWGWIWGIA 307 Query: 327 GLFIG-PVLMALIAVI 341 G +G P+ +++I Sbjct: 308 GAILGIPMTISIILFC 323 >gi|308188498|ref|YP_003932629.1| UPF0118 inner membrane protein yhhT [Pantoea vagans C9-1] gi|308059008|gb|ADO11180.1| UPF0118 inner membrane protein yhhT [Pantoea vagans C9-1] Length = 351 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 121/337 (35%), Gaps = 22/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ ++ IIL + P+L A P+ + + + + Sbjct: 11 QNILIKLAMLVIILAGVRAASDILVPLLLAAFFAIVLNPLVTMLMRR-GFRRGLAIGLVI 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + C ++ L + M E +L ++ + + V +HL Sbjct: 70 TVIFCGILL-LGAIIASSMSEFSDLYPQLRATMEQKMTV-----------------LQHL 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L I ++ ++ + + AS F + + +++ + F + + + Sbjct: 112 AAGFHLNISTDALVQRFDPNTMVNLASAALSGFSGAMTNTVLLVLTVVFMLFEVHHLPYK 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + P K + T++++ G+ + + +L V + GV+ Sbjct: 172 MRNAL--VNPKIRIAGLHKALKGVTHYLALKTLVSLITGIAVWLSLYLLDVKFALLWGVV 229 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ IP G I+ + L+ ++F+A + + L P L+G + Sbjct: 230 AFILNYIPNIGPIIAGIPPFLQALLLNSLFDAAMVAALFTAIHMVFGNMLEPRLMGRGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L F LV +G +G+ + L ++ ++ + Sbjct: 290 LSTLVVFLSLVFWGWLLGPVGMLLSVPLTSITKILME 326 >gi|194389636|dbj|BAG61779.1| unnamed protein product [Homo sapiens] Length = 879 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 649 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 708 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 709 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 768 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 769 TQGLGCKAILLLIFHLVPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 825 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 826 GPILLCILVV 835 >gi|256423124|ref|YP_003123777.1| hypothetical protein Cpin_4116 [Chitinophaga pinensis DSM 2588] gi|256038032|gb|ACU61576.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 360 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 102/316 (32%), Gaps = 20/316 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A +I P+ + + +++ ++ + L L + + + Sbjct: 36 LVPFAFAGLIAILLNPLCNRLERLRIPKVWAISLSLLLAALVLAG--LFYFLSAQISQFG 93 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL+ + +Q + ++ + + +T + D Sbjct: 94 ELIPTLKTRSQE----------------LMGELQQWVALKLGISMEKQTDMLHKLTDNGQ 137 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ + + F + + + + + + Sbjct: 138 QYLGHTLGSIFGVLGVFFLLPVYTFLLLLYKNQLVNFIYESFGSEHKEHVQDVLQSTKGA 197 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIY 268 I+S G+ I ++ A + GV + LG I AI+ +IP GG V I Sbjct: 198 IQSYIAGLLIETAIIAVLNSIALLILGVKYAILLGTIGAILNLIPYIGGLIAIALPVMIA 257 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + N + + FI + + P +V + + L + ++ G G+ G+ Sbjct: 258 TVTNDNFTTPLLIVGVYLLIQFIDNHLIVPKVVASKVSINALISIVVVLMGGALWGVSGM 317 Query: 329 FIGPVLMALIAVIWKE 344 F+ +A++ +I+ Sbjct: 318 FLSIPFVAILKIIFDH 333 >gi|169351127|ref|ZP_02868065.1| hypothetical protein CLOSPI_01906 [Clostridium spiroforme DSM 1552] gi|169292189|gb|EDS74322.1| hypothetical protein CLOSPI_01906 [Clostridium spiroforme DSM 1552] Length = 338 Score = 69.5 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 116/317 (36%), Gaps = 18/317 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 MI+F+++++ Y L + P+ + +I P+ + I+ + + LA + L Sbjct: 12 LMILFVLVITTYVLVNWLIPLFFSCLIVLILQPLLTREINLLKIKNNLLAKAVIIFNYGL 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 FIV ++ L + ++++ ++ + P +L + + + + Sbjct: 72 FIVLVISLIIFCIIQIYNILEIL----------PAYLQKLYVMFSNNSYIIDISKYLDFI 121 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S + ++ FI M ++F+++ F D Q++D L Sbjct: 122 YSGSMSIIENVSSSFIHGLIMII-MKIPSIMFDMVFIVMTSLFMLLD----YQRIDKLLI 176 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +P + V + F II + L + + + V L I AI Sbjct: 177 RKYPM-VSLVVDTTKDVFSNMFKAYFIIMVVTFFELWIGFLIMKLEHSVVLSCIIAIFDF 235 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G + + I A L + + + L P L+ + + L + Sbjct: 236 LPVFGIDMIMIPWIVICAFTNKISLALGLLIIYLVIVITK-NILEPKLIAKGLGISPLVS 294 Query: 313 FFGLVGGVRTMGLLGLF 329 G+ G++ +G +GL Sbjct: 295 LIGMYLGMKILGFIGLI 311 >gi|153938584|ref|YP_001391862.1| hypothetical protein CLI_2628 [Clostridium botulinum F str. Langeland] gi|152934480|gb|ABS39978.1| putative membrane protein [Clostridium botulinum F str. Langeland] gi|295319886|gb|ADG00264.1| putative membrane protein [Clostridium botulinum F str. 230613] Length = 342 Score = 69.5 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 120/319 (37%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + L + +I + PI++ F+ +K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFLISFVIYYVLKPIHT-FLKQKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V + ++ I + + E + + G Sbjct: 90 IKEGYNITSSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIG 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F G LDY + + I +++F G I Q+ + K + Sbjct: 143 ENILNKFVG-LGENILDYAV----IPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMVLAIPIGVIMKIIYED 336 >gi|298490897|ref|YP_003721074.1| hypothetical protein Aazo_1849 ['Nostoc azollae' 0708] gi|298232815|gb|ADI63951.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 365 Score = 69.5 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 131/353 (37%), Gaps = 25/353 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGF---FAPVLSALIIGFTS-WPIYSSFI 52 MR + ++ + + II ++++ L + F + A I+ F +P+ F+ Sbjct: 1 MRRSASPQSLLIYGLSVPIIALNVWLLSVLFRYFQHPITILSIAAILAFLLNYPV--KFL 58 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K + T +I + + L + + L + + +L++K+ P WL+ Sbjct: 59 EKARITRTQAVIIVLIITLALLGILCVTLVPMVIEQTIQLLNKI----------PDWLAS 108 Query: 113 IPG--GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 G + ++ SL N + I A F L L+++ + Sbjct: 109 SQDNLGKLQVVARQRRINIDFSLVTNQINANIQNLVQQIASSAVGFAGTLLSGLLNLVLV 168 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ F+ G + L +L + K ++ ++ FL ++ + LVL Sbjct: 169 VVLAFYMLLYGDHVWYGLINLLPSNIGIPFNKSLQLN---FQNFFLSQLLLGLFMELVLT 225 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + VP + ++ + +IP ++ L++ N + A + + Sbjct: 226 PIFLFLRVPFALLFAIVIGLSELIPFVGATLGISLVTILVLLQNWWLAFPVATVAIVLQQ 285 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I D L P L+G I L + F ++ G GLLG + + I + Sbjct: 286 IKDNLLAPKLLGNFIGLNPIWIFVSILMGFEIAGLLGTLVAVPIAGTIKGTFD 338 >gi|240949621|ref|ZP_04753956.1| putative permease perM-like protein [Actinobacillus minor NM305] gi|240295879|gb|EER46555.1| putative permease perM-like protein [Actinobacillus minor NM305] Length = 350 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 105/338 (31%), Gaps = 11/338 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +PQ + I+ +YF G P+L A+++ + K ++ Sbjct: 14 NDPQTVALLGILLFGFGIIYFFSGLIMPLLVAIVLAYLLESPIRFLTEKLHFPRLLSVLL 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L+ + + + + + W+ +P + Sbjct: 74 VFGGTVSIVAFLLVVMVPSLWNQAVNFIRDLPNMFNL---LNEWVQALPEHYPELVDYAM 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 SLK + ++ + S G+ + + ++ FF +D Sbjct: 131 LDGMMSSLKTKILGYGESLLAISVNSIISLVGLGIYAFLVPLMV-----FFLLKDKPIFL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + I + G + + +V + + L Sbjct: 186 RSFIKMMPK-NRRLATRVWIEMQGQIANYIRGKFLEILIVSVVTYIILIFFDLRYPLLLS 244 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGG 303 V+ + ++P GA I V++ L + + L + ++D + PFL Sbjct: 245 VVVGLSVLVPYIGAVIVTIPVALIALFQFGLSPDFYYLLLAFVISQLLDGNLVVPFLFSE 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L ++ G G+F L L+ + Sbjct: 305 AVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAV 342 >gi|116872852|ref|YP_849633.1| integral membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741730|emb|CAK20854.1| conserved integral membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 345 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 119/358 (33%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R + +I LY L+ +L I + + + + + + ++ Sbjct: 8 LQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + + ++ +LV ++ Sbjct: 68 LYVVIAAVIVFVFVKYIPVLADQINQLVKFGNHFLTT--------------DSNNDFINY 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I+ G+ I + + G + ++ + ++ FF + Sbjct: 114 IIGLANQFDIMK---YTEQGVSMILTYLTNVGTVLMN----VFIALMLSLFFSLGKEHLI 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIAFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGLEYIFYILIVVIIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ + ++ K+ IS Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEDEQLKDTISH 344 >gi|254456848|ref|ZP_05070276.1| integral membrane transport protein [Campylobacterales bacterium GD 1] gi|207085640|gb|EDZ62924.1| integral membrane transport protein [Campylobacterales bacterium GD 1] Length = 343 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 111/329 (33%), Gaps = 23/329 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+L + P L AL I P Y+ F ++ V V+ +F++ Sbjct: 16 VIIVLAGIKSATAIVIPFLLALFIAIILSPSYNYF-----NKKGLPNGLSLVLVITIFVI 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + +E S + Q + G L + + Sbjct: 71 FLASVAKLIGTSAQEFSSNIGSYEQ----------QLSGSFHKITEMAVSLGIELPEEEI 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + G +F + + ++ +F G +S+ + ++ Sbjct: 121 TSIINPKQIMQLTSGIVQGIGSMFTN---GFVILLSVVFMLLESGHFVSKITHATNDNRA 177 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + ++I I+ + +I+I G V+ A G V+ ++ IP Sbjct: 178 ISNIQEIISK----IKRYMVLKALISIFTGFVIWIALLFVGTDYAFLWAVLAFMLNFIPN 233 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + LI+ +A + I+ + P ++G + L L F Sbjct: 234 IGSIIAAVPAVLLTLIQLGSVSALIVSAIYVGVNIIIGSVIEPKIMGRGLGLSTLVVFLS 293 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ +G++G+ + L + ++ E Sbjct: 294 LLFWGWLLGIVGMLLSIPLTMMAKIVLDE 322 >gi|168207851|ref|ZP_02633856.1| putative domain of unknown function [Clostridium perfringens E str. JGS1987] gi|170660835|gb|EDT13518.1| putative domain of unknown function [Clostridium perfringens E str. JGS1987] Length = 345 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 116/322 (36%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMAIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + +++D+ M EL + + E + Sbjct: 94 KEGESFDGLINGIEF-------FINDLIMKMKFMEL---------GIFDVIEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMVFIVPIAVVIKVLFDDW 339 >gi|315301767|ref|ZP_07872817.1| YubA [Listeria ivanovii FSL F6-596] gi|313629863|gb|EFR97946.1| YubA [Listeria ivanovii FSL F6-596] Length = 264 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 87/233 (37%), Gaps = 5/233 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + LK AP++ A I + PI KK + +A++ V + + + Sbjct: 37 IAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKKKWKRGWAIALLYVVIIGLIIL 96 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ ++ L + + ++ +L K ++ + Sbjct: 97 L-FSFVIPAVKDQIISLFKTFPGY---WDQITQKFNEFSQSSLFDQLKDKLSTNMSDIMK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I S G + + L+I+ + LF+ +DG + L + Sbjct: 153 TISEKGTSVLNGAITSIGSIVGTVT-EVILAIVTTPLVLFYLLKDGKKLPDFLLKMLPVN 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 A+ +++ I S G I+++ G++L Y + G+P + L +I Sbjct: 212 GRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIA 264 >gi|300864653|ref|ZP_07109510.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337314|emb|CBN54658.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 367 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 107/299 (35%), Gaps = 10/299 (3%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + + F ++I+ V ++ L + + + + +EL V + W Sbjct: 44 RLLERVGIQRGFASLISAVLLIALIGLFGALVVPPFLSQFRELTQLVPKGLTL---LEIW 100 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 ++ + W ++L L + + +F R FL+ +F Sbjct: 101 INQLFV--WLPTEARQYLPSVGELGNQVQPLISGLANNFF-----RLFSGFLNLTGGSLF 153 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +++ F + + Q L + +I + + + +G + G V Sbjct: 154 VVVITIMFLLNPQAYRQGFLRLFPSFYRRRADEIFSLCETDLVAWIVGTLFNMLVIGSVS 213 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G W+ GV +A ++ + +P PI T + + + + A + + + Sbjct: 214 GIILWILGVKLVLANALLAGFLEAVPNVGPILSTVAPAAIALLDSPWKAVAVVIAYFLIQ 273 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L P ++G + L T + G LGLF+ L+ ++ ++ +E ++ Sbjct: 274 QLEQFLLVPIVMGQQVSLLPAVTLLAQIFFASFFGFLGLFLALPLVIMVRILLREILVK 332 >gi|296112146|ref|YP_003622528.1| transport protein [Leuconostoc kimchii IMSNU 11154] gi|295833678|gb|ADG41559.1| transport protein [Leuconostoc kimchii IMSNU 11154] Length = 332 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 115/341 (33%), Gaps = 27/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + R+ ++ +I++ ++FL+ F + +L +I + + + S +F V Sbjct: 8 QKRQLYRYFVLLVIILLIFFLRQFMSLLLLTIIFSYLAINAAKRLSRFLKLSRSFAIVAV 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + ++K +++ + ++ Sbjct: 68 YAIFIAIIALSINHGASTVVHQVKSMITLTMDSS-----------------------WHA 104 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + ++ + D + ++ ++ F F + Sbjct: 105 NGFLKDIYKNIHQYINSLNTDQLISKGFSQLNQVGHVLYELVLALLFSFIFSMTYPQLKS 164 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ + IV + I F +I + + + + P + Sbjct: 165 WSLNFLHSPYKKFFGEFYIIVHRFIIILGRLFEVQLLIGVINTIAMVIVLYFLHFPYLIG 224 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I+ +IP G IS ++I I GN + + A F+ L P + Sbjct: 225 FTILIFILGLIPVFGVVISLVPLAITAFIIGNWHTVLIILIAVACIHFLESYFLHPHFMS 284 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P L L+ + G+ GL IG ++ + ++ Sbjct: 285 QRTHMPILVILLNLIIMEKIFGVWGLVIGLPILTFLLDFFR 325 >gi|16077515|ref|NP_388329.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221308268|ref|ZP_03590115.1| hypothetical protein Bsubs1_02533 [Bacillus subtilis subsp. subtilis str. 168] gi|221312590|ref|ZP_03594395.1| hypothetical protein BsubsN3_02509 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317514|ref|ZP_03598808.1| hypothetical protein BsubsJ_02473 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321790|ref|ZP_03603084.1| hypothetical protein BsubsS_02544 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928505|sp|P96604|YDBI_BACSU RecName: Full=UPF0118 membrane protein ydbI gi|1881258|dbj|BAA19285.1| ydbI [Bacillus subtilis] gi|2632748|emb|CAB12255.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 350 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 113/354 (31%), Gaps = 21/354 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ I ++ LY K +L I F + + + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFVSQFFRVSQRVVITF 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L V L + + + ++V +H P IP + ++ Sbjct: 72 LYMLLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPD---SIPFFDEITSVFGDINIS 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 G + + + + + L ++ +I FF + +S+ + Sbjct: 129 SYV----------KEGFNVVYTYLADIST----FGLQVVMALILSMFFLFEKKRLSEFMA 174 Query: 190 SLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++++I+ + IIA+ ++ A W+ P L + Sbjct: 175 KFKTSKLRVFYEEIAFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLSI 234 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + +IP G IS +SI G + L I L P L+ Sbjct: 235 MVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKT 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + +S+ Sbjct: 295 ELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGPRENSD 348 >gi|329120004|ref|ZP_08248676.1| permease [Neisseria bacilliformis ATCC BAA-1200] gi|327463917|gb|EGF10231.1| permease [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 126/337 (37%), Gaps = 10/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + L+ P + A ++ + P+ K +++ + Sbjct: 13 IIGTAFFLACGALVLALRDILMPFIVAAVLAYILNPLVEKLRDKGVPR-GAASMLVMLFA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + LL L + + + L +++ L + WL GG + Sbjct: 72 LLLLLALLLILVPMLITQFENLTNRLPQLIDFAQNKALPWLHAHFGGS-----LPLNKEA 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ P ++ G + + + + + + L++F D S + Sbjct: 127 AANWLKNHSGTVQQAASQIAPALMAQGGALAVGVS-NFVLLPLLLYYFLFDWQRWSHGIR 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L F + +ISR + V+ G ++ + GLV G+ L G+ S A+G+I Sbjct: 186 ALIPRRFIDTYTRISREMDDVLGEFLRGQLMVMLIMGLVYGTGLMLTGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKL 307 I+ +P + ++ + + +W + F+ + P +VG I L Sbjct: 246 ILVFVPYLGAFTGLLLATVAALLQFNSWHGMVAVWSVFAVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ +G L A+ V+ +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLVGLPLAAVCLVLLRE 342 >gi|291482855|dbj|BAI83930.1| hypothetical protein BSNT_00768 [Bacillus subtilis subsp. natto BEST195] Length = 350 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 112/354 (31%), Gaps = 21/354 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ I ++ LY K +L I F + + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFVSRFFRVSQRVVITF 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L V L + + + ++V +H P IP + ++ Sbjct: 72 LYILLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPD---SIPFFDEITSVFGDINIS 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 G + + + + + L ++ +I FF + +S+ + Sbjct: 129 SYV----------KEGFNVVYTYLADIST----FGLQVVMALILSMFFLFEKKRLSEFMA 174 Query: 190 SLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++++I+ + IIA+ ++ A W+ P L + Sbjct: 175 KFKTSKLRVFYEEIAFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLSI 234 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + +IP G IS +SI G + L I L P L+ Sbjct: 235 MVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKT 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + +S+ Sbjct: 295 ELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGPRENSD 348 >gi|302531313|ref|ZP_07283655.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4] gi|302440208|gb|EFL12024.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4] Length = 406 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 85/264 (32%), Gaps = 13/264 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+ + + L F+ + EL ++ + + WL + P Sbjct: 87 RGLATAIVLVAGLAVLGGLLTFVITQFSSGLPELQQQLTTSLN---QIKDWLINGPL--- 140 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L + + + I + + A G I + L++ I FF Sbjct: 141 --HLRQEQIQDFINQAIGFLQNNQASLTTTALTTAGTVGEILTGFVLTLFVTI----FFL 194 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G I L R + S +A+ + + +G W+ GV Sbjct: 195 AGGDGIWTFLVRGVPQRVRNRVNVAGRRGFASLVSYIRATAAVAVVDAVGIGIGLWIVGV 254 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L + + A IP + V++ L+ I A + + + L+ Sbjct: 255 PLVIPLATLVFLGAFIPIIGALITGGVAVLIALVSKGIIGAVVVLAIVVGVMQLESHVLQ 314 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVR 321 P L+G ++L L + G+ Sbjct: 315 PLLLGRAVRLHPLAVVLAIAIGLV 338 >gi|148240639|ref|YP_001226026.1| permease [Synechococcus sp. WH 7803] gi|147849178|emb|CAK24729.1| Predicted permease [Synechococcus sp. WH 7803] Length = 359 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 105/296 (35%), Gaps = 13/296 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L+A +I F I +++ + V+ T+ + L + + L + Sbjct: 30 LAPFPGLFLTAALIAFLLD-IPCVWLTSRGLPRWLAIVMVTLFTISLLVFAGVTLVPLLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + W++ + A L ++ L + Sbjct: 89 DQLGQLINALPSLLNQ---AEGWITGLQSLAEARGLPSEFGDLSSDLVTRAGRVASQISQ 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + G ++ + +++ FF G SI+ L + + Sbjct: 146 RLLGILGATLGT-----TINTVIVLVLAVFFLLGGRSIAAGLARWLPTAWREL---VIST 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + + +P V V+ +IP + ++ AVS Sbjct: 198 LSRTFRGYFAGQVLLALILAMGQIVVFTVLKIPYGVLFAVLIGFTTLIPYASALTIIAVS 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + + + + +VD+ ++P L+G + L L G + Sbjct: 258 GLLAFQ-DPKTGLEILVAAILVGQLVDQVIQPRLMGSIVGLQPAWLLIALPLGAKA 312 >gi|308067937|ref|YP_003869542.1| Predicted permease [Paenibacillus polymyxa E681] gi|305857216|gb|ADM69004.1| Predicted permease [Paenibacillus polymyxa E681] Length = 361 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 28/274 (10%), Positives = 90/274 (32%), Gaps = 9/274 (3%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 + + PI +K + + ++ + + L V ++ ++ L Sbjct: 51 LYYLLRPIVDVMERRKIKR-SISILLIYLVIGVLLFVFSWGVWPTLRDQVTNLFENAPKL 109 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + W + + P + + + ++ + Sbjct: 110 IKSLVDQL--------SQWRHNQSLRQVLPPGKDPLSQLSDTLNEAFSTLSDYSVKLVSF 161 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + + + I L++ ++G ++ + + ++ + + S + Sbjct: 162 VSYFFIVLATFPILLYYMLKEGSKFGPKMLNFFPKKYHKDALEVMEDIDSALSSFIVSRV 221 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 +I + G+++ + + G+P + L VI+ + IP ++ + + + + + A Sbjct: 222 LINVALGVMMFLGFLIIGLPYALLLAVISIFLNFIPYVGAVAASIPVVIIGLFESPSMAL 281 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + + I D L P + G + + L Sbjct: 282 WSLVVVIVAQQIQDNWLSPIVFGKQLDIHPLTVV 315 >gi|218441749|ref|YP_002380078.1| hypothetical protein PCC7424_4853 [Cyanothece sp. PCC 7424] gi|218174477|gb|ACK73210.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 359 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 106/335 (31%), Gaps = 22/335 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 II+ + A +I + P+ K+ +LA++ T+ + + Sbjct: 20 FVIIVAGIKSAASILNSFFLASLIAIATVPLLQWLTRKRL--PGWLALLITILGVVGAGL 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ + ++ +L+ + Q V K + + +K Sbjct: 78 TLIAFLGISISQLLQLLPTYEVKIQDFKDV-----------------LKEMLAARGIKAS 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + ++F + + + + ++ + F + S +L Sbjct: 121 QVLSLDIFSPSRLIGSIAQFLLAVIQALSNSLLLVFLVAFMLIEASGFSNKLHQNLIDNN 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + + IRS + T + GV GV+ ++ IP Sbjct: 181 RVFNQ--FNAFSRDIRSYIIITTWTGAITAVADFLILAFFGVDLAALWGVLFFLLNFIPA 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G ++ + +K A + + + IVDK ++P + + L L Sbjct: 239 VGFLLAIIPPFLLGFLKLGTHQAFLIVFFCWLVDNIVDKGIKPRYMQQGLDLSPLIIILS 298 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ +G G + L +I + ES + Sbjct: 299 VIFWSWVLGPTGAILAVPLTLMIKKVILESSEEGR 333 >gi|167626484|ref|YP_001676984.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668920|ref|ZP_04756498.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877452|ref|ZP_05250162.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596485|gb|ABZ86483.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843473|gb|EET21887.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 368 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 114/341 (33%), Gaps = 6/341 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R N + I+ + +M + L FL + AP+L+AL+I + + + + Sbjct: 11 RNRYQNNEPIVFFGLMLFFYLVLTFLGNYIAPILAALVIAYLLDTLVNILQKFTKIKRII 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 L I + + L + + L + + L+ + A+ + L + Sbjct: 71 LVYIVYMLFLILLLSLIFVLLPIIVNQ---LIDFIKQASHTLSSLKESLEQLSVKYPTIL 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S + + +N FI + + + + + + + +F+F +D Sbjct: 128 TEARINSIVTWFDSIDWQKISSNIGSFILQNTATTIPVLFSILIYLFLVPLMVFYFLKDK 187 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S A + + + PK + G I I +V + + Sbjct: 188 ARMINWFKSFLPEQNGALYFVWNDLKPK-LADYVRGKAIELIIVSIVTYMGFAYFNLNYA 246 Query: 242 VALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP G I V + +L G + + I + L P Sbjct: 247 LLLAVGVGLSVIIPYVGMVIITIPVVMVGILQFGLNGTFVSMLIVFFIIQALDGNLLVPL 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L + + + ++ GL G+F L L Sbjct: 307 LFSEVLNIHPVGVVSSILIFGGIWGLWGIFFAIPLALLFIS 347 >gi|15607346|ref|NP_214719.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15839585|ref|NP_334622.1| hypothetical protein MT0215 [Mycobacterium tuberculosis CDC1551] gi|148659969|ref|YP_001281492.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|167968797|ref|ZP_02551074.1| putative conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|215406198|ref|ZP_03418379.1| putative transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|215448484|ref|ZP_03435236.1| putative transmembrane protein [Mycobacterium tuberculosis T85] gi|218755942|ref|ZP_03534738.1| putative transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|253797127|ref|YP_003030128.1| hypothetical protein TBMG_00206 [Mycobacterium tuberculosis KZN 1435] gi|254233592|ref|ZP_04926918.1| hypothetical protein TBCG_00203 [Mycobacterium tuberculosis C] gi|254366656|ref|ZP_04982700.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254549144|ref|ZP_05139591.1| hypothetical protein Mtube_01551 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289552457|ref|ZP_06441667.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289747972|ref|ZP_06507350.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289760308|ref|ZP_06519686.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289764321|ref|ZP_06523699.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994678|ref|ZP_06800369.1| transmembrane protein [Mycobacterium tuberculosis 210] gi|297632685|ref|ZP_06950465.1| transmembrane protein [Mycobacterium tuberculosis KZN 4207] gi|297729659|ref|ZP_06958777.1| transmembrane protein [Mycobacterium tuberculosis KZN R506] gi|306774295|ref|ZP_07412632.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306779038|ref|ZP_07417375.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306782826|ref|ZP_07421148.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306787195|ref|ZP_07425517.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|306791750|ref|ZP_07430052.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|306795792|ref|ZP_07434094.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306801789|ref|ZP_07438457.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306806002|ref|ZP_07442670.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306970396|ref|ZP_07483057.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|306974629|ref|ZP_07487290.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|307082338|ref|ZP_07491508.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307082682|ref|ZP_07491795.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|313656985|ref|ZP_07813865.1| transmembrane protein [Mycobacterium tuberculosis KZN V2475] gi|8928458|sp|O53656|Y205_MYCTU RecName: Full=UPF0118 membrane protein Rv0205/MT0215 gi|2909603|emb|CAA17327.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13879700|gb|AAK44436.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124603385|gb|EAY61660.1| hypothetical protein TBCG_00203 [Mycobacterium tuberculosis C] gi|134152168|gb|EBA44213.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148504121|gb|ABQ71930.1| putative conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|253318630|gb|ACT23233.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|289437089|gb|EFD19582.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289688500|gb|EFD55988.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289711827|gb|EFD75843.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289715872|gb|EFD79884.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|308217128|gb|EFO76527.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308327966|gb|EFP16817.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308332346|gb|EFP21197.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308336098|gb|EFP24949.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308339729|gb|EFP28580.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308343734|gb|EFP32585.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308347455|gb|EFP36306.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308351505|gb|EFP40356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308352082|gb|EFP40933.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308356032|gb|EFP44883.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308359987|gb|EFP48838.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308367553|gb|EFP56404.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323717194|gb|EGB26403.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326905960|gb|EGE52893.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328456914|gb|AEB02337.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 367 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 114/330 (34%), Gaps = 19/330 (5%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I+ ++ L+ L F PVL AL++ P S+ + + +S Sbjct: 25 LVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHA-VAVTLVLLSG 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L F+ + + LV++V + RWL + P + ++ + Sbjct: 84 FAVLGGILTFVVSQFIAGLPHLVTEVERSIDSAR---RWLIEGPAHLRGEQIDNAGNAAI 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++L+ + A + + + ++ L FF G SI Q + Sbjct: 141 EALRNNQAK---------LTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTK 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + R + ++A+ + +G+ + GVP + L + Sbjct: 192 AFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFF 251 Query: 251 MAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A IP + F AV + LL KG I A + L+P ++G + + Sbjct: 252 GAFIPLIGAVVAGFLAVVVALLAKG-IGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIH 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + +A Sbjct: 311 PLAVVLAIAAGGVLAGVVGALLAVPTVAFF 340 >gi|256824791|ref|YP_003148751.1| putative permease [Kytococcus sedentarius DSM 20547] gi|256688184|gb|ACV05986.1| predicted permease [Kytococcus sedentarius DSM 20547] Length = 357 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 101/323 (31%), Gaps = 11/323 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++ + T P+ + + + + + ++ F + + E Sbjct: 46 ITLLVVSVFLALTLNPLVEQLMLR-GLRRSGAVTVVFLWLLVAFTGIGALVLPPIVDEST 104 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ Q + W+ ++ + L S L+ Sbjct: 105 ALLYDAPTYTQAFLEQ-DWVQQADRDFQLTDRFQNELQKRVSSGELAGQVTGGVLGAGRV 163 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 FG + + + + +L +++S + + Sbjct: 164 LATGAFGAFTVLVLTLYLLATL---------PQTKRAGYALVPASRRERVEELSEKIMRR 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G ++A GL + G+P L V+ + +IP V + Sbjct: 215 VGGYAAGQFLVATINGLCSWVMMTILGIPYAAVLAVLVGFLGLIPLVGATIGAVVVGLIA 274 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + ++ A + + I + + + P ++ + +P T + G G+LG + Sbjct: 275 LSQSVEVALIVGAYYLIYQQVENYVIVPNIMKRTVSVPGAVTVVAALIGGTLAGILGALL 334 Query: 331 GPVLMALIAVIWKESIMAIKENK 353 A + +I++E ++ + + Sbjct: 335 AIPTAAGLLLIYEEVLVPRQARR 357 >gi|218675451|ref|ZP_03525120.1| hypothetical protein RetlG_30796 [Rhizobium etli GR56] Length = 301 Score = 69.1 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 87/267 (32%), Gaps = 16/267 (5%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ + ++P+ + + + ++ + W Sbjct: 1 MITFTLALMILIPV------LVSQFNDFAERLPGYISQLQQFIDTSKNSLLPEWVRSQAG 54 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + FL + G +D ++ + F+ D + Sbjct: 55 TIKDNFSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRM 109 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++D + A ++I++ + + I G + + G+ + L G+ + + Sbjct: 110 ISKVDQWIPRDYVADVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLI 169 Query: 245 GVITAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+ +++ IP + V+I + L ++ + F+ L+P L Sbjct: 170 GLFAGMISFIPYVGSLVGLVLSVGVAIVQFWPDYPWIGLVLVVFFSG-QFLEGNILQPKL 228 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLG 327 VG + L + F L G +G Sbjct: 229 VGSSVGLHPVWLMFALFAFGALFGFVG 255 >gi|119774627|ref|YP_927367.1| hypothetical protein Sama_1490 [Shewanella amazonensis SB2B] gi|119767127|gb|ABL99697.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 358 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 107/332 (32%), Gaps = 23/332 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +IL + P + + I P+ S + + +LAV+ + + + Sbjct: 20 FVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRV--PKWLAVMLLMFFIVMLG 77 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + E + + W +++I Sbjct: 78 LWLATLVGSSINEFSKQLPHYRDQLIQQFG-----------------WILEKLQTLNIRI 120 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 E L + + ++ +I+ + F + S+ +++ + Sbjct: 121 SKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKVHLALDD- 179 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 P + + + T++++ G V+G GV + VI + IP Sbjct: 180 -PEMRLQQIDKFLHSVNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAFLFNYIP 238 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G+ I+ + I+ A L ++ + P +G + L L F Sbjct: 239 NIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVMGNVIEPKFMGRGLGLSTLVVFL 298 Query: 315 GLVGGVRTMGLLGLFIG-PVLMALIAVIWKES 345 L+ +G +G+ + P+ M + + + S Sbjct: 299 SLIFWGWLLGSVGMLLSVPLTMIVKIALERSS 330 >gi|257462328|ref|ZP_05626743.1| permease [Fusobacterium sp. D12] gi|317059994|ref|ZP_07924479.1| permease [Fusobacterium sp. D12] gi|313685670|gb|EFS22505.1| permease [Fusobacterium sp. D12] Length = 377 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 121/337 (35%), Gaps = 14/337 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF P++ A+ + +P+ + + F + + ++ F + ++ + Sbjct: 39 FFVPLIWAVFLSILLYPLQAFLRNHFHVKRAFALIAVLLLLV-------FFFSLFMLIVI 91 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ + Q + + + + + L ++ + + + + I I Sbjct: 92 PQVSKSIKELQQIYPYIEKRVGEFLDKSFLFLHKRGLLFMDETEIMKAISTYTKDNIQKI 151 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQQLDSLG----EHLFPAYWKK 202 + D I +I LF F + ++ L + + Sbjct: 152 QQIGISIFWNVFDLTFGIANFLIGLFLACFILLKPEDFIKLIERLVYLSVKKEKALQIIE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I R + + F+G +++I ++ +L+ P V ++ + MIP + Sbjct: 212 ILRKSKDIFLNYFVGRLLVSIIVAFIVFLVLFLSKTPYPVLTALLFGVGNMIPYLGVLGA 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +S +L++ + L + + + P +VG + L ++ + Sbjct: 272 SLISGFLILIFAPYKIGYLIFAIVLSQALDGFIIGPKIVGDKVGLNSFWVVVAILLCGKL 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 MG+ G+F+G + +I +I++E A + +E Sbjct: 332 MGIAGMFLGVPIFCIIKLIYEEKWKAYVQEEENEKEK 368 >gi|168183712|ref|ZP_02618376.1| sporulation integral membrane protein YtvI [Clostridium botulinum Bf] gi|182673274|gb|EDT85235.1| sporulation integral membrane protein YtvI [Clostridium botulinum Bf] Length = 351 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 114/333 (34%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ + FL + P + A + S I K + ++ + I T+ Sbjct: 11 LILFFIIYTTSFLIFFKTLSYTLPFVLAFLFALVLKKPASYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVHEVVDFGRNAQAYLYSHEEE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY----------CLSIIFMIIALFFFYR 179 P S+ E + + G I + + I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ + + + + I K++ L + +++ + Sbjct: 183 DITKYNNKISKIMFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N L + + I+ + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLI-SYAAVSIIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|114778235|ref|ZP_01453107.1| permease, putative [Mariprofundus ferrooxydans PV-1] gi|114551482|gb|EAU54037.1| permease, putative [Mariprofundus ferrooxydans PV-1] Length = 357 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 83/250 (33%), Gaps = 4/250 (1%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ H + L D + A+ + + Q + + ++ G Sbjct: 93 EQIGRLATHAPQYMQSLRDTLHQLQANYAEWINPDYLQQIIAGATDKMQEWGGALFKFSI 152 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + + + + + + +FF +D I +++ R + I + Sbjct: 153 ASI-PGMITLLVYAVLVPVLVFFLLKDKQLIMSWAQQFLPR-ERTLLQRVWRELDIQIGN 210 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 G A G + YW G + LGV+T + IP G + V + + Sbjct: 211 YIRGKFWEAFIIGCAMWVVYWWMGHDYALLLGVLTGLSVWIPFVGMAVVTVPVILLSYFQ 270 Query: 273 GNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + L + + +D + P+L + L + ++ G++G+ I Sbjct: 271 WGWSDTMAYGLLAYVIVQAIDANVIVPWLFSEIVNLHPIAIIVAILMFGSLWGIVGVIIA 330 Query: 332 PVLMALIAVI 341 + AL+ + Sbjct: 331 IPMAALVKSV 340 >gi|110681719|ref|NP_114401.2| transmembrane protein C9orf5 [Homo sapiens] gi|55958884|emb|CAI15128.1| chromosome 9 open reading frame 5 [Homo sapiens] gi|55961248|emb|CAI13317.1| chromosome 9 open reading frame 5 [Homo sapiens] gi|57160693|emb|CAI39466.1| chromosome 9 open reading frame 5 [Homo sapiens] gi|119579442|gb|EAW59038.1| chromosome 9 open reading frame 5, isoform CRA_a [Homo sapiens] Length = 879 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 649 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 708 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 709 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 768 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 769 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 825 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 826 GPILLCILVV 835 >gi|291043852|ref|ZP_06569568.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293399067|ref|ZP_06643232.1| permease [Neisseria gonorrhoeae F62] gi|291012315|gb|EFE04304.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291610481|gb|EFF39591.1| permease [Neisseria gonorrhoeae F62] Length = 359 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 122/331 (36%), Gaps = 10/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ +Y L P A ++ + P+ K ++ + S++ L + Sbjct: 22 FAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLAL 81 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + Sbjct: 82 -LLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWF 134 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + + G + +++ + L++F D S + L Sbjct: 135 QAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPRR 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 195 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVP 254 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 255 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ MG +G+ G L A+ V+ +E Sbjct: 315 FSLMAFGELMGFVGMLAGLPLAAVTLVLLRE 345 >gi|15803986|ref|NP_290022.1| hypothetical protein Z4848 [Escherichia coli O157:H7 EDL933] gi|291284814|ref|YP_003501632.1| hypothetical protein G2583_4177 [Escherichia coli O55:H7 str. CB9615] gi|25325137|pir||C86015 hypothetical protein yhhT [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12518133|gb|AAG58583.1|AE005570_10 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|290764687|gb|ADD58648.1| hypothetical protein G2583_4177 [Escherichia coli O55:H7 str. CB9615] Length = 364 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 29 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 84 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 130 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 189 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 247 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 248 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 307 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 308 MVVFLSLLIWGWLLGPVGMLL 328 >gi|218440715|ref|YP_002379044.1| hypothetical protein PCC7424_3795 [Cyanothece sp. PCC 7424] gi|218173443|gb|ACK72176.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 350 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 117/325 (36%), Gaps = 17/325 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W+++ +I + F L A +I F + ++ S + + + + + Sbjct: 26 WLLVLLINSLEPLVSIFVTATLLAFLIDFP-----IRLLEQRGISRLWAVTLVFLMALVI 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L L + ++ EL+S + + G +L + ++ Sbjct: 81 LAILSLILVPLIVQQLSELISVLPQWIETGSQNLEYLRQWAIAQNLPINLNETITQMAER 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + ++FI +IIF+++ F G ++ + L S Sbjct: 141 LTNIFQSLSSQVLNFILSTIGSI--------FNIIFVLVLTVFLVFTGENLWEGLFSW-- 190 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + K + ++ + F I+A L + + VP V GV + + Sbjct: 191 -LPVPWNKDLRNLIREKFEKYFASQAILAGILSLSQTLIFTVLNVPYSVLFGVTIGLTTL 249 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP + ++ + +L N + + I I D+ + P L+GG L + Sbjct: 250 IPYASALTIL-LISIILSLENWVLGLKVLIAAIIIGQINDQVIAPRLMGGLTGLNPVWLI 308 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALI 338 L G ++ G+LGL I ++I Sbjct: 309 IALFIGGKSAGILGLLIAVPFASVI 333 >gi|171741160|ref|ZP_02916967.1| hypothetical protein BIFDEN_00227 [Bifidobacterium dentium ATCC 27678] gi|171276774|gb|EDT44435.1| hypothetical protein BIFDEN_00227 [Bifidobacterium dentium ATCC 27678] Length = 492 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 110/353 (31%), Gaps = 23/353 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 ++ P+ + R ++ I + ++ + ++ +L + P+ + Sbjct: 39 DSRRPPEWLGRALLYIAIAIVVFSFCWRSWGQIAYLVMDIVVSLFLALAVEPVVVPLVKH 98 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 F ++ A V + + + ++ +++ + P I Sbjct: 99 -GWKRAFASLFALVLLAVILCTLFGLFGNMFVQQVIAMINGL----------PDLYKQI- 146 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + S+ L SL ++T+ + A + L+++ +++ Sbjct: 147 -CDFVSQYTNFELPEINSLGSEILKNIQTSWVTDFAGTALSTVSGLFSFLLNLMTIVMTT 205 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ G + + + + + I S I+A+ Sbjct: 206 YYISAAGPKLRRAACQWMAPAAQRRFLFVWTVSQGQISSFLFSRAILALLNATFTAICLE 265 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + VP + L + + + IP G I ++ I+ + + + I Sbjct: 266 VLHVPYWLPLALFCGVTSQFIPMLGTYIGGALPVLFAWGNRGIWYGIAVLAFICVYQQIE 325 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P + + + F ++ G LG F+ + A I I++ Sbjct: 326 NLIFAPKISQRTMNINDAVAFLAVLAFGSLFGALGAFLALPVTASIQTIFRTY 378 >gi|256371624|ref|YP_003109448.1| protein of unknown function UPF0118 [Acidimicrobium ferrooxidans DSM 10331] gi|256008208|gb|ACU53775.1| protein of unknown function UPF0118 [Acidimicrobium ferrooxidans DSM 10331] Length = 422 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 112/332 (33%), Gaps = 13/332 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + + L+ ++ A ++ PI S + + V A Sbjct: 22 LGVAVWAFAVLRHLELEIVVAGVLALVIEPIVSRLVRLGLPRVVAVLVTA---------- 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L L L +V V + +P LS + A E L +L + Sbjct: 72 -VLVLAALVGLAAAFVVPLVNAGQRLLGDLPGLLSRLRAHRAAIEALLVRLHLQHALDVG 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ + A + ++ + F + L + + Sbjct: 131 AQSI--AHAAQLAVTPALSVASGAVGSLATLAVIGTLAVFLSLEAPKAIAWLVAQLDASR 188 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + V + LG ++ GLV+G Y + G+P +G+ ++ ++P Sbjct: 189 RPRVEGVLHDVAIAVAGYVLGNLATSVVAGLVIGVTYAILGLPDPALIGLWVGLVDLLPL 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ ++ L + G + + + I + L P + ++L L + Sbjct: 249 VGGLAGGVPAVALALVGGPEDVVIVLIVVLAYQQIENHVLNPVVYAKTVRLSPLWVLVAI 308 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G + L G I + + I VI +E++ Sbjct: 309 LVGAQAASLPGALIAIPIASAIQVIARETLRD 340 >gi|29830936|ref|NP_825570.1| integral membrane protein [Streptomyces avermitilis MA-4680] gi|29608049|dbj|BAC72105.1| putative integral membrane protein [Streptomyces avermitilis MA-4680] Length = 347 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 120/357 (33%), Gaps = 28/357 (7%) Query: 9 QGIMRWMIMFIILVSL-YF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + W + +++ + + L+ PVL AL+ P++ + + + + Sbjct: 9 RRLAAWCAVILLVAGVGWVGVQLCGELRTAVVPVLLALLGTALLGPLHRRLV-RVGVNRS 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A I V+V+ + + + + E+V+ + A Q Sbjct: 68 LAAGITCVAVVAVVGGAVYIVVAALLDTGDEIVASLKRAAQS------------VAAHFG 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T + K L F T + I + I + ++ RD Sbjct: 116 AAGTSLDDLASNAKELLTKFGGTAASNVISGVSVVGESIAMAVLALLLVFFFL-----RD 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L SL + ++R + + G T+IA + + + + GVP Sbjct: 171 SHRAAGLLRSLAPGGTADTVEAMARRAFEAVEGFMRGTTLIAFIDAVCITVGLLILGVPG 230 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LG + + A IP GA IS + L A A + L+P Sbjct: 231 AVGLGALVFVGAYIPYLGAFISGALAVLVALADRGFVIALWALGVVAAVQVLEGHVLQPA 290 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 + +++ + GG G+LG+ + P+ A AV+ + + + Sbjct: 291 IQSRTVQMHPAVVMLTITGGASVAGILGMLLAVPLTAAAFAVVHELRARYAADTPQP 347 >gi|240080750|ref|ZP_04725293.1| hypothetical protein NgonF_05467 [Neisseria gonorrhoeae FA19] gi|240123489|ref|ZP_04736445.1| hypothetical protein NgonP_06040 [Neisseria gonorrhoeae PID332] gi|268596868|ref|ZP_06131035.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268682120|ref|ZP_06148982.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268550656|gb|EEZ45675.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268622404|gb|EEZ54804.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 356 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 123/331 (37%), Gaps = 10/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ +Y L P A ++ + P+ K ++ + S++ L + Sbjct: 19 FAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLAL 78 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 79 -LLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + + G + +++ + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ MG +G+ G L A+ V+ +E Sbjct: 312 FSLMAFGELMGFVGMLAGLPLAAVTLVLLRE 342 >gi|269838060|ref|YP_003320288.1| hypothetical protein Sthe_2036 [Sphaerobacter thermophilus DSM 20745] gi|269787323|gb|ACZ39466.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 380 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 104/306 (33%), Gaps = 19/306 (6%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + S ++ + M + + F+ ++ LV ++ P ++ Sbjct: 70 LERLRIPSGIAVLLVYLVAMAVVVAIGWFVLPPLFGQVATLVDEI----------PNYVD 119 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI---FLDYCLSII 168 E W + L+ E + T G + SR + L ++ Sbjct: 120 R---YQAVRESWERLREQYPELEPF-EEQVATAGSRLLSTVGSRLAELPSELFSLFLDVL 175 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + + + SL +++ R + I I+ ++ Sbjct: 176 SIFVISMLLVTTRGRLLSFILSLVSPDHRDTAERVMREMWDRIGYYVRAKLIVMTIIAVI 235 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 A + GVP V L ++ + +P G ++ + ++G +F + Sbjct: 236 TYVALIIIGVPYAVLLSIVVGLGEAVPRIGPWLARIPLLTIAALQG-WTTFLLVFGASLV 294 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P++ G + + L F ++ G +G+ G F+ A++ V+++E I+ Sbjct: 295 IENAKGYAISPWVEGDQLDIHPLLVFVAVLVGAALLGVAGAFVAVPAAAMVQVMFEEVII 354 Query: 348 AIKENK 353 + + Sbjct: 355 PWRRAQ 360 >gi|218283604|ref|ZP_03489576.1| hypothetical protein EUBIFOR_02168 [Eubacterium biforme DSM 3989] gi|218215753|gb|EEC89291.1| hypothetical protein EUBIFOR_02168 [Eubacterium biforme DSM 3989] Length = 368 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 103/323 (31%), Gaps = 7/323 (2%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A +I I K+ +++ + + + + + +V Sbjct: 46 MAFVINLVMAKIEKRLNFMKKGKRATSLLLSLILIFLFVYFLITLVVPSLSEAIGVIVQV 105 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + ++ ++L D+ +L I S + + G+ + Sbjct: 106 LPKYFEN---AQKFLVDLFENNPQLANSINNLDIDWKNLIQSGINVISTGVTNVVGTTFN 162 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA----YWKKISRIVPKVI 211 + ++ + + M I + + Q L + I+ + Sbjct: 163 VVTVIVNSVFNFVLMFIFAIYVLLEKERFVQLYHRLTNLYLSETVKRRMDRCLNIINQTF 222 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + G I A G + + +P +G + ++ +IP A+ ++++ Sbjct: 223 SAFIGGQCIEATILGTLCTLGMIILRMPYPAMIGTLVGVINIIPMIGAYIGGAIGMFMVF 282 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + L+ I I + P +VG + LP + +V G+ G+F+G Sbjct: 283 TVSPIMSLWFLLYLCILQQIESNVIYPHVVGNSVGLPGIYVMMTVVIFGSLAGIPGMFLG 342 Query: 332 PVLMALIAVIWKESIMAIKENKE 354 MA + I + + KE Sbjct: 343 IPTMASVYKIGVLYLNRKERLKE 365 >gi|146313513|ref|YP_001178587.1| hypothetical protein Ent638_3881 [Enterobacter sp. 638] gi|145320389|gb|ABP62536.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 349 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 118/321 (36%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A+ V V Sbjct: 14 LLKLACLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGIKRP--VAITIVVLV 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + + L+ + + E ++ K + L + + Sbjct: 72 MLIVLTALVGVLAASLSEFSTMLPKYNKE-----------------LTRKALELQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + I FA+ SI+ +++ + F + + +L Sbjct: 115 LNLHMSPERMLQRMDSEKIMTFATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKL-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V + L + ++ G+++ L GV + GV+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSKYLALKTLL-SLWTGVIVWLGLTLMGVQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA +S I + I+ + + I+ L P ++G + + Sbjct: 233 LNYVPNIGAVLSAVPPMIQAFLFNGIYECMLVGALFLVVHMILGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|291459908|ref|ZP_06599298.1| permease [Oribacterium sp. oral taxon 078 str. F0262] gi|291417249|gb|EFE90968.1| permease [Oribacterium sp. oral taxon 078 str. F0262] Length = 432 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 106/368 (28%), Gaps = 27/368 (7%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------------STFLAV 64 II L + PV+ ++ + P+Y K E + F A Sbjct: 35 IIRAGLGRILNILTPVIYGAVMAYLMAPVYDLTERKLRERMERYFPGKRFPHSFARFAAT 94 Query: 65 IA-------TVSVMCLFIVP-----LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + + ++P L L + K+ + LS Sbjct: 95 FSALLLLLLVSGSLVYIMIPELMKSLTRLSSTLPDSITLYYEKISGLLKSYPEAREALSA 154 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + S ++ + + + + + +I M Sbjct: 155 LYEEAYGYFSGPGSSSGSGGGTLIPNLQMAALYLSKLSSGIWSTLTWVKNILIGLIVMAY 214 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L + L +L + + ++ +G + +I G++ Sbjct: 215 LLNLKELLIAQFHKLLFALLPRDAARSVVEELDYINRMFGGFIIGKILDSIIIGILTFFV 274 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P + + VI I +IP P L+ N + + + Sbjct: 275 LSIMRMPYAMLVSVIVGITNVIPFFGPFIGAIPCFVLIFLANPLQGLYFAIAILVIQQLD 334 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKE 351 + P ++G L F ++ G +G+ I P ++ +I + S ++E Sbjct: 335 GNVIGPRILGNSTGLSSFWVLFSILLFGGLFGFVGMIIAVPTWAVILNLIARISNRRLRE 394 Query: 352 NKEKISSN 359 +SS Sbjct: 395 KGLPLSSE 402 >gi|321314121|ref|YP_004206408.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|320020395|gb|ADV95381.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 350 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 113/354 (31%), Gaps = 21/354 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ I ++ LY K +L I F + + + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFVSQFFRVSQRVVITF 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L V L + + + ++V +H P IP + ++ Sbjct: 72 LYMLLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPD---SIPFFDEITSVFGDINIS 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 G + + + + + L ++ +I FF + +S+ + Sbjct: 129 SYV----------KEGFNVVYTYLADIST----FGLQVVMALILSMFFLFEKKRLSEFMA 174 Query: 190 SLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++++I+ + IIA+ ++ A W+ P L + Sbjct: 175 KFKTSKLRVFYEEIAFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLSI 234 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + +IP G IS +SI G + L I L P L+ Sbjct: 235 MVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKT 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + +S+ Sbjct: 295 ELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGHRENSD 348 >gi|313898479|ref|ZP_07832016.1| putative membrane protein [Clostridium sp. HGF2] gi|312956861|gb|EFR38492.1| putative membrane protein [Clostridium sp. HGF2] Length = 403 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 81/246 (32%), Gaps = 7/246 (2%) Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFF 177 + ++++ + + + TN I+ + AS + S + + Sbjct: 145 DYRIENITQVEQFIQMPWEKIVTNVINLLSGSASGILSSATGFVSSFAVGFTGFMFSLYL 204 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA- 236 + +Q+ + KI + F + E +L Y++ Sbjct: 205 LSGKENFIRQMRKVTAAFLGYGNSKIVFRYAARVNRIFSSFIGGQLTEACILWVLYYIFM 264 Query: 237 ---GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 P + + A+ +M+P + +V +++ + + ++ I + D Sbjct: 265 RLFQFPYPELICTLIAVCSMVPVFGSMFAMSVGAIMMLSKDPLQSVWFIIFYQILSYFED 324 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P +VG + LP L + G+ G+ + A + V + E + + Sbjct: 325 NVIYPRVVGNSVGLPGLWVLLSIFVFGDLWGVFGMIMAVPTTACLYVFFTEYVNHRLRKQ 384 Query: 354 EKISSN 359 I + Sbjct: 385 RLIVTE 390 >gi|300814732|ref|ZP_07094980.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511119|gb|EFK38371.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 415 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 56/362 (15%), Positives = 125/362 (34%), Gaps = 18/362 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE------ESS 59 LN +GI + I + + F + A +I +K + Sbjct: 51 LNQKGISKIFITLLS-----IMFPFILGGVLAFMIKIVLNFFEEKLFNKIKSARFQKHKR 105 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + + + L + + + +L + + Q I R ++ I Sbjct: 106 KISILVSIFVIFLIIFIILRIVVPQFISSISKLQTALPPLIQKAIDKSRNIAFINEYSDK 165 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFF 176 + HLS + + E I + A L ++ + +I + Sbjct: 166 MQKIYDHLSVSKIFDQIREFVKNQGDNSSISTAFQRAYSTATNILGGIVNFVLALITAIY 225 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 D + Q + +F + +++ + G I + G+++ Sbjct: 226 ILSDKEHLEYQSKRIVYSIFSKKTSGKIFHVFKLLHQNFEGFIRGQIIDSTVLGIIVFIF 285 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +LA +P+ LGV+ + ++P P + L++ + A ++ I + Sbjct: 286 SFLAKMPNATTLGVLAGVTNLVPIIGPFIGGFMGFVLIVIDDFSKAIIFVIFIFIMQQVE 345 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P LVGG + LP L T + G G++G+++ L + I + E + Sbjct: 346 SNLIYPKLVGGAVGLPALWTLIAITVGGSLFGVVGMWVFIPLTSTIYTLIGEYTKYKIDK 405 Query: 353 KE 354 K+ Sbjct: 406 KD 407 >gi|251779664|ref|ZP_04822584.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083979|gb|EES49869.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 382 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 117/327 (35%), Gaps = 5/327 (1%) Query: 24 LYFLKGFFAPVLSALIIGFT--SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + + F A I+ F + + SK + V ++ M L + + F+ Sbjct: 44 IVIFQPFIIGFSIAYILNFILKFYEKKLNVYSKLKSKRGLGLVFTYITAMLLIGLFIQFV 103 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + LV+ V ++++ + + SE + +++ + I + Sbjct: 104 LPQLIQSIIGLVNDVPKFINEST---KFINKLMLDLNISEEYLPLINNNFNEFINYIIKI 160 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 TN + + F ++ + L +I I L + + ++ Sbjct: 161 ATNLLPVLGGFVTKIASSIWNIVLGVIISIYLLIDKEKFCAMSKKVTYAIFYKNAAEKII 220 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I+ +G + + G++ + +P + + VI I +IP P Sbjct: 221 EITHRSNDTFGKFLMGKILDSFIIGILTFVILTIFRMPYAILISVIIGITNIIPFFGPFI 280 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 S +++ A + + I + P ++G I + F ++ + Sbjct: 281 GAIPSFIIILFVAPVKALWFLVIILVIQQIDGNIIGPKILGDSIGISAFWILFSILFAGK 340 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 +GL+G+ IG L A++ I KE + A Sbjct: 341 FLGLIGMIIGVPLFAVVYSIIKEIVEA 367 >gi|149372808|ref|ZP_01891829.1| hypothetical protein SCB49_12634 [unidentified eubacterium SCB49] gi|149354505|gb|EDM43070.1| hypothetical protein SCB49_12634 [unidentified eubacterium SCB49] Length = 364 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 131/351 (37%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + I+ LY +K F A +I + PI F ++ + S+T A T+ Sbjct: 14 RSITIIAAVLILGWFLYSIKALFLFFGIAAVISLIARPIMFFFKTRLKFSNTL-ATFTTL 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ +F ++E + ++++ D+ + + Sbjct: 73 FLVILAVSLLIRIFVPIVIEQGQNIAEIDFDMVK--------RDLNELSIQASDFLGVEQ 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I +K+ + +P F F D + + ++ FF ++ I + Sbjct: 125 IDIIESIKKSEQIKSFDLGLVPSFFDVFISNLGDGLVGLFAVLFISFFLIKEENFIPSAV 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + + ++ F+G+ + + + + + +A+ +I Sbjct: 185 TSFAKEGNEKRFLLVFTKIKNLLSRYFIGLMVQIFILSVFYSILLLVFDIDNAIAIAIIC 244 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTL-RPF 299 A + ++P P+ + + +++ N +F C G + D + +P Sbjct: 245 AFLNIVPYLGPLIAGGLMMLIVLSNNLAADFSTELFPVLCYVFIGYCLAQLFDNLITQPV 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G G+ G+ + + + V+ KE + K Sbjct: 305 IFGKSVKSHPLEIFVVILIGGFLFGIAGMILAVPVYTALKVMSKEFLSEYK 355 >gi|325109727|ref|YP_004270795.1| hypothetical protein Plabr_3176 [Planctomyces brasiliensis DSM 5305] gi|324969995|gb|ADY60773.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 352 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 121/335 (36%), Gaps = 26/335 (7%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I S+Y L+ P + A+ + PI + + + A I V+ + + Sbjct: 13 TLTAIAIGFSIYGLRTVLVPFVIAVFVVSGIGPILDALQIRLHVNRLLAAGITFVAGLVI 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 V L+ + + + + V ++P A + P+ Sbjct: 73 MFVLGSALWASTVELRQSAPAYRQRIQELVDRVENAFPNLPMQKKAEAV------TPEKN 126 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + FL I +S L + + ++I +FF L E Sbjct: 127 AEAIDAFLDAMLHKGIATLSSA----MLYLITTGVVVLIYVFFML---------LGQSTE 173 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A W KI + + +R T++++ GL+ G + G+P + GV+ ++ Sbjct: 174 SSPSATWTKIDDQIREYLRL----KTVVSLITGLIFGGVLAMFGIPMALTFGVLAFLLNY 229 Query: 254 IPGGAPISFTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP P+ T + + L+I + ++ + + F+ + P L+G L + Sbjct: 230 IPNIGPLVATVLPVPLIILNPEAHLLWIVAVIGSISAIQFVSGNIIEPKLMGDSTDLHPI 289 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ G++G+F+ + A + ++ + Sbjct: 290 VILLALMFWGMLWGIVGMFLATPITAGLKLVLDQF 324 >gi|59801203|ref|YP_207915.1| hypothetical protein NGO0789 [Neisseria gonorrhoeae FA 1090] gi|240014126|ref|ZP_04721039.1| hypothetical protein NgonD_05668 [Neisseria gonorrhoeae DGI18] gi|240016561|ref|ZP_04723101.1| hypothetical protein NgonFA_05224 [Neisseria gonorrhoeae FA6140] gi|240115637|ref|ZP_04729699.1| hypothetical protein NgonPID1_05225 [Neisseria gonorrhoeae PID18] gi|240117930|ref|ZP_04731992.1| hypothetical protein NgonPID_05637 [Neisseria gonorrhoeae PID1] gi|240121688|ref|ZP_04734650.1| hypothetical protein NgonPI_07968 [Neisseria gonorrhoeae PID24-1] gi|240128188|ref|ZP_04740849.1| hypothetical protein NgonS_06047 [Neisseria gonorrhoeae SK-93-1035] gi|260440550|ref|ZP_05794366.1| hypothetical protein NgonDG_05586 [Neisseria gonorrhoeae DGI2] gi|268601319|ref|ZP_06135486.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268603645|ref|ZP_06137812.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268686588|ref|ZP_06153450.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|59718098|gb|AAW89503.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|268585450|gb|EEZ50126.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268587776|gb|EEZ52452.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268626872|gb|EEZ59272.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 356 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 122/331 (36%), Gaps = 10/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ +Y L P A ++ + P+ K ++ + S++ L + Sbjct: 19 FAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLAL 78 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + Sbjct: 79 -LLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWF 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + + G + +++ + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ MG +G+ G L A+ V+ +E Sbjct: 312 FSLMAFGELMGFVGMLAGLPLAAVTLVLLRE 342 >gi|78223970|ref|YP_385717.1| hypothetical protein Gmet_2774 [Geobacter metallireducens GS-15] gi|78195225|gb|ABB32992.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 348 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 100/311 (32%), Gaps = 13/311 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESST-FLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 L + ++ + P + S +A+ ++V+ LF V + F E Sbjct: 35 FLLSFVLAYLLDPAVVLLERRGLRRSWGIVALYLVLTVLSLFFVAFIVPFASIRWEAFLK 94 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 L I + + +P G W + Q K+ + + Sbjct: 95 GLPAYLQKGKAIVLSWKMQALPAGADDEWRWLFETATGQIDKMAAR----------LGAG 144 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 F+ +++ I +FF I + + + R + + Sbjct: 145 VYEAATGFVFNLFNLVLAPILIFFMLWYKNEIKTGIITWLPRSRREAVLTLGREINASVG 204 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G I++ ++ A ++ G+ G+ + +++P I T ++ Sbjct: 205 GYIRGQLIVSAIVAILSIIALFILGIDYPFLNGIFAGLASVLPFIGVILATLPPLFFAYV 264 Query: 273 GNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L + GA + F+ ++P + + L L T ++ MG G+ + Sbjct: 265 QYQSGFVLLKVIGAFAVIYFLEGYVVKPLVFKESMDLNPLVTIMVVMLFGELMGFWGILL 324 Query: 331 GPVLMALIAVI 341 + A + ++ Sbjct: 325 AIPIAAAVRIV 335 >gi|323530014|ref|YP_004232166.1| hypothetical protein BC1001_5738 [Burkholderia sp. CCGE1001] gi|323387016|gb|ADX59106.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 381 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 124/340 (36%), Gaps = 9/340 (2%) Query: 8 PQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 P+ M W + + L + L+ P L +I + P + ++ T A+ Sbjct: 22 PRQAMLWGALAVGAGLLMWILRPVLTPFLLGGLIAYMLQPGVEWLVRRRIPR-TLAALAM 80 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + ++ L +F E+ L S++ + WL P + Sbjct: 81 MLLFALVIVLLGLLVFAVIQKELPALASQIPG---FTARINAWLQ--PKLGLVGLESSFD 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 LS +++ + R+ G + +++ + + L++ D + Sbjct: 136 LSSLRNVLTSRLAGGGQSIEVAAWRYVRTGGSALVTVVGNVVVVPLVLYYLLYDRRKVFA 195 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +++SL + + + + +++ G ++ + A LAG+ + +G+ Sbjct: 196 RIESLVPRPWLGKTRALVTEMDQMLSQYLRGQLLVMVVLATFYPIALSLAGLGVALPVGL 255 Query: 247 ITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP G A A+ LL G+ + + L A+ + L P L+G Sbjct: 256 FTGLAVFIPYVGFATGLLLAMLAALLQFGDWYGFGAVALIYAVGQVLETAFLTPRLIGER 315 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L F L+ G G+ + + A++ +E Sbjct: 316 IGLHPLAVIFALLAFGEMFGFFGVLLALPVSAILVTALRE 355 >gi|304407575|ref|ZP_07389227.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304343526|gb|EFM09368.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 372 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 106/319 (33%), Gaps = 5/319 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +++I+ + L PV + I P + +++K + + I+ + Sbjct: 16 ALIALTVYLIMFAFSHLYKIATPVFLSFFIYIFIEPP-ARWMNKLGIKKSIASAISVLLF 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L Y + L+ K+ + Q SD L L Sbjct: 75 TLVILSVFLGTGYIIADQANGLIQKLPVYQQIMKDQVALHSDW-IAAKMDTLPPDLLGQF 133 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + F+ +S F + + II +F + + Sbjct: 134 DKVVDYVTSKGQHLATQFLLTISSYL-TSFSAFIFNFAIGIILAYFLSVEIKDWKRVAAD 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + F + + V K I + + +V+ + L GV + + V++AI Sbjct: 193 KTPNTFKKAFSFLRDNVFKGIGAYLKSQLKLISITFIVIFVSLLLLGVDNAFTISVVSAI 252 Query: 251 MAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++P G F IYL I G A + + + + L P + G + + Sbjct: 253 FDVLPLLGVGTVFVPWIIYLFIVGKTTLAIWVSALFLTVV-LARQILEPKITGDTLGVSA 311 Query: 310 LPTFFGLVGGVRTMGLLGL 328 ++ + G+ G+ Sbjct: 312 FTMLAFMIISLSLFGIAGV 330 >gi|253573458|ref|ZP_04850801.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846986|gb|EES74991.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 358 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 115/335 (34%), Gaps = 18/335 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R + + +++ LYF + +L I+ + +++ + + + + Sbjct: 15 RVLALLFVVLVLYFARSMLNMLLITFILTYLINRLHNFISRNVAKVIRINRTVTVLFIYV 74 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I L YY M + ++ +V P L D P + E Sbjct: 75 VLITLLGSAIYYYMPVLLTELTDLVNQVISFYSNPPVLPDNPILNYIVEYLKDIDLSAYI 134 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 NG F+ + G ++ L++ I+ FF + ++ Sbjct: 135 ----------NNGFTFLLSTLTDIG----EWSLNLFIAIVLSLFFLLEKEKVTNFAVQFR 180 Query: 193 EHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 E +K++ R + +IA ++ W+ G P+ +AL ++ Sbjct: 181 ESRIGGLFKELEYFGRKFVQSFGKVIEVQFLIATVNAVLSTIFLWILGFPNLIALAIMIF 240 Query: 250 IMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ ++P G IS + G + + + A+ + L P + LP Sbjct: 241 LLGLVPVMGVIISLIPLCAIAFKIGGLIKIVYVLIMIALVHAVETYFLNPKFMSNKTHLP 300 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 TF L+ +G+ GL +G + + I + Sbjct: 301 IFFTFLILLVSEHFLGVWGLIVGVPIFIFLLDIVE 335 >gi|168218240|ref|ZP_02643865.1| putative domain of unknown function [Clostridium perfringens NCTC 8239] gi|182379751|gb|EDT77230.1| putative domain of unknown function [Clostridium perfringens NCTC 8239] Length = 345 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 116/322 (36%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + +++D+ M EL + + E + Sbjct: 94 KEGESFDGLINGIEF-------FINDLIMKMKFMEL---------GIFDVIEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMVFIVPIAVVIKVLFDDW 339 >gi|57864913|gb|AAW57087.1| conserved hypothetical protein [cyanobacterium endosymbiont of Rhopalodia gibba] Length = 363 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 121/342 (35%), Gaps = 10/342 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +L L+ L+ ++ A++I T P+ S+ + +I + ++ L Sbjct: 22 FLLTILWQLRNLLVILMIAVVIASTLAPLVRSWEKR-GIPPWLAVIIVYLGLLTLITGIS 80 Query: 79 LFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L L + +++ L+ K+ + G W + + L QSL + Sbjct: 81 LILGPTIIAQIQRLLQKLPGYLDILGTEFQNWATIRGFTQPEVLEFINQLLDLQSLVSWT 140 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++ + I L ++I ++ + + + +L H + Sbjct: 141 LSYSQKFLIG-----VGGVTRGILGGVFNVILAVLLSGYMLSGSKKLIGGIVNLFPHPWD 195 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPG 256 + + + + G +I+ G + G+ + LG I I +IP Sbjct: 196 KRLEAQVVPISQRMGGYIQGRLLISFILGSAISLGLRFLGISEFALGLGTIAGITNLIPF 255 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + I + +G L L+ + L P LVG + + L Sbjct: 256 FGPVLGSIPALIVAIAQGGWVYLWVLLLF-LFIQNLETYVLDPLLVGSSVNVSPLYQLLA 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++ GV+ +G+LG I P +A V+ + + K ++ + Sbjct: 315 VLSGVQILGILGALIVPPWVAGAGVLLQNLYLIPKLQAQEQA 356 >gi|289209220|ref|YP_003461286.1| hypothetical protein TK90_2059 [Thioalkalivibrio sp. K90mix] gi|288944851|gb|ADC72550.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. K90mix] Length = 406 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 116/343 (33%), Gaps = 30/343 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++++ + F P+ A ++ +P+ S Sbjct: 36 ALLVWLLGQVVSFFYALLLPLSVAGVLSLILYPVVRWLQRIAGFSRMGAVS--------- 86 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +G++ + +V V++ V ++ P A + + + Sbjct: 87 --------SLFGVVLIALVVVSVLVVPTASHQVQEFIKGAP--ELAENAYESFSRNFPNA 136 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDS 190 + L+ + I G + Y + + F+ + LFF G + + Sbjct: 137 TERVASMLEELDLQSIMPNLEGVGSQLMHYVTVVVGLAFVPLYLFFALLSGERLKEGGRE 196 Query: 191 LGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + P +++ R+ + + F G +IA+ G++L + L G+ + + G++ Sbjct: 197 VLSVFRPQTQRELMFLGRLFVGYVTAFFQGQVVIALIMGVLLAVGFSLIGLQAAILFGLM 256 Query: 248 TAIMAMIPGGAPIS----FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + ++P I V+ G + + + A+ I L P ++ Sbjct: 257 LGFLNIVPYLGTIVGLTLALPVAYLQPEGGGLTLVALVLVVFAVVQLIESWLLTPKIMAD 316 Query: 304 PIKLPFLPTFFGLVG-GVRTMGLLGLFIGPVLMALIAVIWKES 345 L + G G++G+ + L A +A +WK Sbjct: 317 RSGLHPAIVVISIFFWGTALGGIIGMILAVPLSAFVASLWKHF 359 >gi|253731994|ref|ZP_04866159.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724235|gb|EES92964.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 185 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 70/170 (41%) Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ F + + + + S G I++ G++L Y + G+ + L I A Sbjct: 1 NIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAA 60 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +++P P + +I + + + L + + F+ + P ++G +K+ Sbjct: 61 VTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHP 120 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L F L+ + +G++G+ +G A++ V+ K + N Sbjct: 121 LTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGN 170 >gi|237797091|ref|YP_002864643.1| sporulation integral membrane protein YtvI [Clostridium botulinum Ba4 str. 657] gi|229261548|gb|ACQ52581.1| sporulation integral membrane protein YtvI [Clostridium botulinum Ba4 str. 657] Length = 351 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 114/333 (34%), Gaps = 26/333 (7%) Query: 15 MIMFIILVSLYFL-----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+F I+ + FL + P + A + S I K + ++ + I T+ Sbjct: 11 LILFFIIYTTSFLIFFKTLSYTLPFVLAFLFALVLKKPASYLIKKLKIKNSLASFIVTLI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + ++ +L+ Sbjct: 71 FFSIIITLLFWGINLLVHEVVDFGRNAQAYLYSHEEE--------ISNYVDNIYRYYLNL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY----------CLSIIFMIIALFFFYR 179 P S+ E + + G I + + I+F +++ +FF + Sbjct: 123 PPSIIDSIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + ++ + + + + I K++ L + +++ + Sbjct: 183 DITKHNNKISKIMFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIK 242 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + AI +P G + ++ IY+L+ N L + + I+ + L Sbjct: 243 YSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLI-SYAAVSIIRQILE 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 302 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 334 >gi|213691447|ref|YP_002322033.1| protein of unknown function UPF0118 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522908|gb|ACJ51655.1| protein of unknown function UPF0118 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 550 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 71/212 (33%), Gaps = 2/212 (0%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++T+ + A + L+++ +++ ++ G + + + Sbjct: 175 IQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRF 234 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGA 258 + + I S +I+A+ + + VP + L + +++ IP G Sbjct: 235 LLVWTVAQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGT 294 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I ++ A + ++ + I + L P + + + F ++ Sbjct: 295 YIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQRTMDINAAVAFLSVLA 354 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G F+ + A + I++ + Sbjct: 355 FGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|161524877|ref|YP_001579889.1| hypothetical protein Bmul_1704 [Burkholderia multivorans ATCC 17616] gi|189350373|ref|YP_001946001.1| putative permease [Burkholderia multivorans ATCC 17616] gi|160342306|gb|ABX15392.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] gi|189334395|dbj|BAG43465.1| putative permease [Burkholderia multivorans ATCC 17616] Length = 650 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 5/193 (2%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + A F + +I +I+ F + ++L L + Sbjct: 192 QLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHRTTTAMSDAARR 251 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + FL + + G VL + G+P + GVI +M +P G I+ +I L Sbjct: 252 LSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATI-L 310 Query: 270 LIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + + + + L P + G L + + G +G Sbjct: 311 AAAMSPGWSMIVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVG 370 Query: 328 LFIG-PVLMALIA 339 L + P+ + L+ Sbjct: 371 LVLSTPLTLCLVI 383 >gi|296454763|ref|YP_003661906.1| hypothetical protein BLJ_1638 [Bifidobacterium longum subsp. longum JDM301] gi|296184194|gb|ADH01076.1| protein of unknown function UPF0118 [Bifidobacterium longum subsp. longum JDM301] Length = 563 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 71/212 (33%), Gaps = 2/212 (0%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++T+ + A + L+++ +++ ++ G + + + Sbjct: 175 IQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRF 234 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGA 258 + + I S +I+A+ + + VP + L + +++ IP G Sbjct: 235 LLVWTVAQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGT 294 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I ++ A + ++ + I + L P + + + F ++ Sbjct: 295 YIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQRTMDINAAVAFLSVLA 354 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G F+ + A + I++ + Sbjct: 355 FGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|255037065|ref|YP_003087686.1| hypothetical protein Dfer_3310 [Dyadobacter fermentans DSM 18053] gi|254949821|gb|ACT94521.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 354 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 121/328 (36%), Gaps = 20/328 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++V++Y + P+ A ++ P+ + +A+ +++ L + + Sbjct: 1 MMVAIYLGQDIIVPLALAGLLAVLLRPLEQRLMRM--GIPKLIAITLALTLAILVVSAVA 58 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + + K+ H R W+ ++ + + E Sbjct: 59 VLISMQVADFSDEWPKLKRNIDHFYRDARRWIRR----EYSVSYRQQAEYLKNAQTKTLE 114 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 TF G + I+ I Y I + E Sbjct: 115 TFQGPET----------LGAVTGPLGTLILIPIYTFLLLYYRAMLIHFSVVLFAEEQK-H 163 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +I + +I+S +G+ + ++ + + V + LGV+ AI+ ++P Sbjct: 164 RVLEILGEIKSIIQSYMVGLLLETTAVAVLNSAGLLVLNVQYAILLGVMAAILNLVPYIG 223 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVD-KTLRPFLVGGPIKLPFLPTFFGL 316 + TA+++ + + L + G I + I+D L PF+VG +K+ L + G+ Sbjct: 224 GLVATALAVMVTFISHPEIDVLLGVVGIFIVVQIIDNNFLVPFIVGSKVKINALVSIVGV 283 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G GL G+F+ +A++ VI+ Sbjct: 284 LVGGALAGLSGMFLSIPAIAMMKVIFDR 311 >gi|92114548|ref|YP_574476.1| hypothetical protein Csal_2430 [Chromohalobacter salexigens DSM 3043] gi|91797638|gb|ABE59777.1| protein of unknown function UPF0118 [Chromohalobacter salexigens DSM 3043] Length = 360 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 113/315 (35%), Gaps = 26/315 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +LS I + P++ + L + + V+ + LL + +E Sbjct: 38 IPILLSLFIAVICTSPVHWLHERGLGMRLSVLVTLLILGVLVTLLGALLGNSFATFMEAL 97 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + +H + V RWL+ PQ + S F ++ D++P Sbjct: 98 PKLQE--QLQEHYLAVLRWLAG-----------QGISIDPQGI---SRLFDTSSATDWVP 141 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F G + + ++ +I LF +S+ L + L + Sbjct: 142 VFLGSVGNLLSQSVVIMLLVIFMLFETLDFRNKVSRALLNPAPSLKRFT------EFSRN 195 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 ++ T+I++ G+++ + L GV + G + + IP G+ ++ + Sbjct: 196 LKRYLAIKTVISLVTGVLVWGSCLLIGVDFALLWGTLAFCLNYIPNIGSALAAVPAVLLT 255 Query: 270 LIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L G +F A L F + + P ++G + L L F LV G +G Sbjct: 256 LAMPEGGLFKAMVLAGAYLAINFFMGNIIEPRVMGRTMGLSTLVAFLSLVVWGWIFGPVG 315 Query: 328 LFIG-PVLMALIAVI 341 + + P+ M L + Sbjct: 316 MLLSVPLTMTLKIAL 330 >gi|329957470|ref|ZP_08297945.1| hypothetical protein HMPREF9445_02825 [Bacteroides clarus YIT 12056] gi|328522347|gb|EGF49456.1| hypothetical protein HMPREF9445_02825 [Bacteroides clarus YIT 12056] Length = 376 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 118/338 (34%), Gaps = 23/338 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L P A +I + +P+ + F + + + +++ + + + +L M Sbjct: 31 LSSVLLPFFIAWLIAYLIYPLVTFFQYRLKLKNRIVSIFCALLALLIVGAGTFYLLVPPM 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ V + + ++ S ++ L +K ++E F K N + Sbjct: 91 IQECGRVQAL---------LVQYFSHGTYNSNVPTSLSEFLRDNIDVKFITELFNKENLL 141 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR-------DGFSISQQLDSLGEHLFPAY 199 D + R L + ++F + +F D SI++ L + ++ Sbjct: 142 DALKEAVPRLWS-LLSDSIDLLFSVFTIFIILLYIIFILLDYESIAEGWTHLVPLKYRSF 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I V + F G +A+ G++ + + P + LG+ + M+P Sbjct: 201 VVGILNDVKVGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNMVPYLQI 260 Query: 260 ISFTAVSIYLLIKGNIFNATCLFL------WGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I F I ++K + + + I D + P ++G L Sbjct: 261 IGFVPTIILAILKASDTGGNFWIIIASAMAVFIVVQAIQDGFIVPRVMGKITGLNPAIIL 320 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ + Sbjct: 321 LSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINREN 358 >gi|148821398|ref|YP_001286152.1| transmembrane protein [Mycobacterium tuberculosis F11] gi|148719925|gb|ABR04550.1| conserved transmembrane protein [Mycobacterium tuberculosis F11] Length = 367 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 93/278 (33%), Gaps = 12/278 (4%) Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 AV T+ ++ F V L + + L V + RWL + P + ++ Sbjct: 73 AVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQI 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++L+ + A + + + ++ L FF G Sbjct: 133 DNAGNAAIEALRNNQAK---------LTSGALSTAATITELVTAAVLVLFTLIFFLYGGR 183 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SI Q + + R + ++A+ + +G+ + GVP + Sbjct: 184 SIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLAL 243 Query: 243 ALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + A IP + F AV + LL KG I A + L+P + Sbjct: 244 PLASLVFFGAFIPLIGAVVAGFLAVVVALLAKG-IGYALITVGLLIAVNQLEAHLLQPLV 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +G + + L + G G++G + +A Sbjct: 303 MGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFF 340 >gi|255656022|ref|ZP_05401431.1| hypothetical protein CdifQCD-2_10054 [Clostridium difficile QCD-23m63] gi|296450549|ref|ZP_06892303.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296879329|ref|ZP_06903324.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260624|gb|EFH07465.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296429872|gb|EFH15724.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 361 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/318 (11%), Positives = 105/318 (33%), Gaps = 4/318 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + ++ + + H+ H + + Sbjct: 102 NRLINEMPMYTD---YINSFIEKNMSNIDFLKTLIPHIQHSLDNVLKEASNFIGKISKNF 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 159 LIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTTRNKADSIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + ++ + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESI 346 F+ + A++ + I Sbjct: 339 FLSVPIAAVVKTYVDKYI 356 >gi|194098586|ref|YP_002001648.1| Transporter, putative [Neisseria gonorrhoeae NCCP11945] gi|193933876|gb|ACF29700.1| Transporter, putative [Neisseria gonorrhoeae NCCP11945] gi|317164255|gb|ADV07796.1| Transporter, putative [Neisseria gonorrhoeae TCDC-NG08107] Length = 359 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 122/331 (36%), Gaps = 10/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ +Y L P A ++ + P+ K ++ + S++ L + Sbjct: 22 FAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLAL 81 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + Sbjct: 82 -LLIIVPMLVGQFNNLASRLPQLIGFIQNTLLPWLKNTIGG------YVEIDQASIIAWF 134 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + + G + +++ + L++F D S + L Sbjct: 135 QAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPRR 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 195 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVP 254 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 255 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 314 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ MG +G+ G L A+ V+ +E Sbjct: 315 FSLMAFGELMGFVGMLAGLPLAAVTLVLLRE 345 >gi|294497736|ref|YP_003561436.1| hypothetical protein BMQ_0969 [Bacillus megaterium QM B1551] gi|294347673|gb|ADE68002.1| putative membrane protein [Bacillus megaterium QM B1551] Length = 344 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 117/333 (35%), Gaps = 25/333 (7%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +L I F + + K +ST + ++ ++++ + M Sbjct: 29 IRSMLQLLLFTFIFTFLIGRLQQTLRRKLPLNSTLILIVIYIALIGALGIVGYVYIPVIM 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ELV K++ +H P +++ I +LK I Sbjct: 89 TQVTELVQKLMYFYKH-PPDNTFVTYI----------------IDNLKRFKSPENIQQNI 131 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK---I 203 D + + S G + L+++ + L + I + L + ++K+ + Sbjct: 132 DLVYSYLSNIGKVSAQVFLALLLSLFFL----LEKSRIHRLFVQLEQSRLGWFFKEAGYL 187 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R IIA ++ A W+ G P+ +ALGV+ ++ ++P G +S Sbjct: 188 GRKFVNSFGKVIEVQFIIAFVNSILSVIALWVLGFPNLLALGVMVFLLGLVPVLGVFVSL 247 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + G + + + + L P L+ LP TF LV G Sbjct: 248 IPLCTIAYSLGGGVKVLSVLIMVVVLHALESYVLNPKLMSSKTNLPTFITFIILVFGEHF 307 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ GL +G + + KE+ Sbjct: 308 LGVWGLILGIPIFIFFLDLVGVDSAQQLSKKEE 340 >gi|330431037|gb|AEC16096.1| putative transport protein [Gallibacterium anatis UMN179] Length = 347 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 122/327 (37%), Gaps = 19/327 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + IIL + P L AL + P+ + + K +LAVIA + ++ + + Sbjct: 20 LVIILAGIKSAVEIIVPFLLALFLAIVCTPLINFLVKLKV--PLWLAVIALLGLIVIALT 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + E + + Q L+ I K + + Sbjct: 78 FFAGLVGTAVNEFS---ASIPTYKQLLAQRIAGLAAIMDRFDLYRFLPKTI--------V 126 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E + I R + + + + ++ ++ LF + S+ Q+L ++ Sbjct: 127 EEHLDPNIIMGLIRRLLTGISGVITNGFVLLLIVVFMLF----EAPSMKQKLAIFFQNKQ 182 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + + V + S T +++ G+++ +A + G+ V G + ++ IP Sbjct: 183 ERKELENIQRVLSSVISYLAIKTFVSLLTGVLVWAALAILGIQYAVLWGTVAFLLNYIPN 242 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ V + LI + + + + I+ + P L+G + L L F Sbjct: 243 IGSVLAAIPVVVQALILNGYSDGLLVAIAFLVINMIIGNIIEPRLMGRTLGLSTLVVFIS 302 Query: 316 LVGGVRTMGLLGLFIG-PVLMALIAVI 341 L+ +G +G+ + P+ MA+ + Sbjct: 303 LIFWGWLLGSVGMLLSVPLTMAVKIAL 329 >gi|309800181|ref|ZP_07694366.1| membrane protein [Streptococcus infantis SK1302] gi|308116189|gb|EFO53680.1| membrane protein [Streptococcus infantis SK1302] Length = 223 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 2/213 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N ++ + + L II + L + DG L+ Sbjct: 2 QNILNSVTNSVGSVLSALVSTVLIIIMTPVFLIYLLLDGHKFLPMLERTILKRDKLNISG 61 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + + I G++I A+ G + Y + G+ + + + + +IP G I Sbjct: 62 LLTNLNTTISRYISGVSIDAVIIGCLAFIGYSMIGLRYALVFAIFSGLANLIPYVGPSIG 121 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + I L + ++ I + L P +VGG +K+ + L+ Sbjct: 122 LIPMIISNLFT-DPHKMIIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLLSSN 180 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + +++ I K + +KE Sbjct: 181 IYGVIGMIVAVPTYSILKEIAKFLARLYENHKE 213 >gi|148380520|ref|YP_001255061.1| hypothetical protein CBO2565 [Clostridium botulinum A str. ATCC 3502] gi|153933161|ref|YP_001384807.1| hypothetical protein CLB_2506 [Clostridium botulinum A str. ATCC 19397] gi|153936838|ref|YP_001388277.1| hypothetical protein CLC_2436 [Clostridium botulinum A str. Hall] gi|168180546|ref|ZP_02615210.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|148290004|emb|CAL84123.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152929205|gb|ABS34705.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397] gi|152932752|gb|ABS38251.1| putative membrane protein [Clostridium botulinum A str. Hall] gi|182668572|gb|EDT80551.1| putative membrane protein [Clostridium botulinum NCTC 2916] Length = 342 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 118/319 (36%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ F+ +K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFFISFVIYYVLKPIHT-FLKQKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V + ++ I + + E + + G Sbjct: 90 IKEGYNITSSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIG 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F G LDY + + I +++F G I Q+ + K + Sbjct: 143 ENILNKFVG-LGENILDYAV----IPIIVYYFLAAGDKIIQKFFIIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + ++ +I+++ Sbjct: 318 AGMVLAIPIGVIMKIIYED 336 >gi|89071208|ref|ZP_01158394.1| Conserved hypothetical membrane/transport protein [Oceanicola granulosus HTCC2516] gi|89043250|gb|EAR49478.1| Conserved hypothetical membrane/transport protein [Oceanicola granulosus HTCC2516] Length = 376 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 98/283 (34%), Gaps = 14/283 (4%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL-----ANQHGIPVPRWLSDIPGGMWASE 121 TV +V L + V ++V N+ + + L + ASE Sbjct: 70 TVVSAVFLVVALGAGATGAIYAASGPVGRLVERAPEIGNELEVKMRGLLQSVDEVQKASE 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S + ++ S+ ++ FF G Sbjct: 130 QVEQLASGGDEEGEPQQVVVEQGA------LIGDLVGSMASAGTSLAVALVLAMFFLATG 183 Query: 182 FSISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +++ + L I R V + I +T+I G G+ +G A WL G+P+ Sbjct: 184 DMFQRRIIENAQRLSDKKRAMMIVRDVERQISRYLAAITVINAGLGVCIGVALWLIGLPN 243 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI-FNATCLFLWGAIELFIVDKTLRP 298 G+ ++ +P GA + V+I ++ + A + + + P Sbjct: 244 AHFWGIAAFLLNFLPFIGAMVGTAGVAIMAIVTFDTMGQALLCPIAYLALTALEGNVVTP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G + + + F ++ V G+ G F+ ++ ++ V+ Sbjct: 304 TLLGRHLAINTVSVFLTVMLWVWLWGIPGAFLAVPVLVIVKVL 346 >gi|329891165|ref|ZP_08269508.1| hypothetical protein BDIM_28760 [Brevundimonas diminuta ATCC 11568] gi|328846466|gb|EGF96030.1| hypothetical protein BDIM_28760 [Brevundimonas diminuta ATCC 11568] Length = 419 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 92/324 (28%), Gaps = 19/324 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY+L+ P+ A+ + + + + F A + V+ F+ + + Sbjct: 59 LYWLRDILTPLAMAVFLMIMIDGVKRAIERRTPIPPRFAGAAALIVVVLGFLASIWIIVD 118 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + R +S + G +S P +L + Sbjct: 119 GAAGFFTDASGVAGSIGPRIDQISRDVSALVG-----------ISDPPTLHDM---IAGI 164 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + ++ A + + MI F + + E ++ Sbjct: 165 DMRGWLTTTAFQVQGAATG---AFFVMIYLGFLLASQAGFRKKMVGMFPERGPRQEALEV 221 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + + V G+ + + I+ IP Sbjct: 222 FERVRGGVEGYLWVQAVTGAMICAVAWGLMRAVGLQNAEFWTFVIFIVGFIPVLGGAVAG 281 Query: 264 --AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 L+ + + A LF+ LF+V ++P + G + + L + Sbjct: 282 CAPPLFALVQFESYWPALILFVGLQTLLFLVGNLVQPRMQGDNQNIDPIVVLLALAFWGK 341 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G+ G+F+ L + I E Sbjct: 342 LWGVAGMFLSTPLAVMAMAILAEF 365 >gi|268589315|ref|ZP_06123536.1| permease, PerM family [Providencia rettgeri DSM 1131] gi|291315338|gb|EFE55791.1| permease, PerM family [Providencia rettgeri DSM 1131] Length = 354 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 14/347 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVS 69 + + +F +LVS + + FF+ +L+ L+ + + + S + I Sbjct: 17 QAIALFTLLVSGFVIIFFFSSILAPLLAAIALAYLLEWPTNLLQRIGLSRSVAVGIILTL 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +L + + L++ + + +P A Sbjct: 77 FAGISAMVILIIAPTAWQQGINLMADLPNMVNR---FNEFAQKLPEQYPALVDVGIIDMM 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +L+ + + + ++ + + FF +D IS+ Sbjct: 134 ADNLRSRMSGIADSVVKASVASLIG-----IFTLAVYLVLVPLMTFFLLKDKERISKSFL 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L K+ + + I + G + G+ + + V L V+ Sbjct: 189 KLLPK-NRLLVGKVWVEMNEQITNYLRGKVTEMVIVGVATYLCFAYFDLRYSVLLSVLVG 247 Query: 250 IMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP GA + V I L G L L + + + P L + L Sbjct: 248 VAVLIPYIGAVAATIPVVIVALFQFGIGSEFWYLMLVYLVIQGLDSNVVVPLLFSEAVNL 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L +V G G+F L LI + E++ Sbjct: 308 HPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHVWPEEPTESQN 354 >gi|330983017|gb|EGH81120.1| hypothetical protein PSYAP_31588 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 242 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 78/191 (40%), Gaps = 3/191 (1%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + A+ + + + +++ + + F+ RD ++ ++ L A K Sbjct: 50 GDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLPRQREAQIVK 109 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ +V+ + G ++ +G G++ + L G+ + +GVI + A++P + Sbjct: 110 LAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAIVPYMGFVIG 169 Query: 263 TA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V+ G+++ + I + L P LVG I L + F ++ G Sbjct: 170 IGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPVAVIFAILAG 229 Query: 320 VRTMGLLGLFI 330 G G+ + Sbjct: 230 GELFGFTGILL 240 >gi|329939947|ref|ZP_08289229.1| putative membrane protein [Streptomyces griseoaurantiacus M045] gi|329300773|gb|EGG44669.1| putative membrane protein [Streptomyces griseoaurantiacus M045] Length = 415 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 109/358 (30%), Gaps = 16/358 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF--LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + +I L S F L G +L A + P S S Sbjct: 37 MPRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINILIAFFLALAIEPAVSWMASH-GLR 95 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + ++ L + L ++ +++ I +W + Sbjct: 96 RGLATFLVFLCLLLLTAGFVALLGSMLAGQIIKIIEGFPEYLDSLI---QWTNTTFHTEL 152 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L H L+ +++ + + A G +F +++ F+F Sbjct: 153 RRVDVQNNLVHSDWLRK----YVQNSATGVLDVSAQVLGGLFRLLTITLF-----SFYFA 203 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 DG + + L S+ A + I ++A+ G + Sbjct: 204 ADGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLQALEI 263 Query: 239 PSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P L V +++ IP A+ + + + + A + + + + L+ Sbjct: 264 PYAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYMLQ 323 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L + + F ++ G +G +G + +A + + + + Sbjct: 324 PKLTARSVDIHPAVAFGSVIAGTALLGAVGALVAIPAIATLQALLGAYVKRYDVTDDP 381 >gi|323464925|gb|ADX77078.1| conserved membrane protein, putative [Staphylococcus pseudintermedius ED99] Length = 365 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 102/297 (34%), Gaps = 12/297 (4%) Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + K+ I +++ + + + +++ L+ ++ + + Sbjct: 57 FQKMLEKRHLPRWASITIILLALTAMMAAVIGVIGPVIATQIENLIHQIPFIQREAERLI 116 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + + + T+ ++ S + L +N ++ I S + Sbjct: 117 NF--ALDQRDRLPDQVTEKINDIVSYFSQMASDLLSNSLNIISSIVST--------LFLL 166 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I + L + +D + ++ + + + + + + S G +++ G Sbjct: 167 ILVPFFLIYMLKDHERFIPAVANIFNGERKIFIVNLLKDLNQTLMSYIQGQVTVSLILGA 226 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 +L Y + G+ + L + + MIP G ++F I L + + + + Sbjct: 227 ILYIGYSIIGLEYTMLLVMFAIVANMIPFLGPWMAFLPAGI-LGLIQSPTTFIWVCVITL 285 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I + + P ++G + + L ++ G + + L A++ I + Sbjct: 286 IAQQLEGNVITPNVMGKSLNIHPLTIIIVILASGSLGGFTLILVAVPLYAVLKTIVR 342 >gi|322370485|ref|ZP_08045043.1| permease [Haladaptatus paucihalophilus DX253] gi|320549902|gb|EFW91558.1| permease [Haladaptatus paucihalophilus DX253] Length = 431 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 106/313 (33%), Gaps = 34/313 (10%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + L + + + PIY + + + + +P++ L Y + Sbjct: 34 FEGTFVLGLFMYYATRPIYDRLEHRLGH-----PGLTAAAALVTVALPVVLLVSYAVAVS 88 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 V+++ + G L + + L Q + F + + Sbjct: 89 AVEVAEIAGESLQG--YEGVLRPYFDLSSLTVHPQRILELAQQSQGEFMRFGGPELLTTV 146 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI--V 207 + FG L +++ F F+ RD + + + + + V Sbjct: 147 ANVVAAFGTGLLQLFVALAFA----FYLLRDDDKLVRW---FVSDIGGERSTAYTYVEAV 199 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV--------ITAIMAMIP-GGA 258 + +++ + G + A GL Y LA V + L + +T + +++P G Sbjct: 200 DRSLQTVYFGNILNAFVVGLAAAVVYNLANVFAPSGLSIPLPTLLGLLTGVASLVPVVGT 259 Query: 259 PISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + + ++ YL+++ F + L+ + + + +RP++ G +L Sbjct: 260 KLVYVPIAAYLVVRSFDIGPRTLWFPVAFVALFVVVIDLVAEVIIRPYITGR--ELHVGL 317 Query: 312 TFFGLVGGVRTMG 324 F + G G Sbjct: 318 MLFAYIFGPLLFG 330 >gi|239998962|ref|ZP_04718886.1| Transporter, putative [Neisseria gonorrhoeae 35/02] gi|240112881|ref|ZP_04727371.1| Transporter, putative [Neisseria gonorrhoeae MS11] gi|240125733|ref|ZP_04738619.1| Transporter, putative [Neisseria gonorrhoeae SK-92-679] gi|254493752|ref|ZP_05106923.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268594809|ref|ZP_06128976.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268598966|ref|ZP_06133133.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268684330|ref|ZP_06151192.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|226512792|gb|EEH62137.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548198|gb|EEZ43616.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268583097|gb|EEZ47773.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268624614|gb|EEZ57014.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 356 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 122/331 (36%), Gaps = 10/331 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ +Y L P A ++ + P+ K ++ + S++ L + Sbjct: 19 FAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKKGLNRASASMSVMVFSLILLLAL 78 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + Sbjct: 79 -LLIIVPMLVGQFNNLASRLPQLIGFIQNTLLPWLKNTIGG------YVEIDQASIIAWF 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + + G + +++ + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ MG +G+ G L A+ V+ +E Sbjct: 312 FSLMAFGELMGFVGMLAGLPLAAVTLVLLRE 342 >gi|119511129|ref|ZP_01630247.1| hypothetical protein N9414_16956 [Nodularia spumigena CCY9414] gi|119464224|gb|EAW45143.1| hypothetical protein N9414_16956 [Nodularia spumigena CCY9414] Length = 350 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 124/344 (36%), Gaps = 20/344 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESS 59 E + N + I +++ + + L F + A I+ F Sbjct: 11 EKLNNTKLIRYVLLLALGWAIVQVLAYFSTVIVIFIFAGILAFLLSYPVKWSERFLPH-- 68 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ + + + + ++ L + + + ++L+ + ++ I + L +I Sbjct: 69 GIAVIVVFLVSLLVLVGLIVTLGFAILSQFQQLLEQAPQFVEYVISLLNTLQNILIKFNF 128 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L E L+ + I + F L + +I + + FF Sbjct: 129 KVDFQ-----------LIEEALRNQILAGIGTGWATF-QGLLINLVDLILIAVVAFFMLL 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + L +++ + + F G ++++ G + + +P Sbjct: 177 DGKRVWDFLMKFFPR---NVRNQVTLAIQQNFLGFFWGRLLLSLFFGGSIFVVFIFIQLP 233 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L I + +IPG + + + I+ + + + I + + L P Sbjct: 234 YALFLAAIAGVFDLIPGIGATIGITLVALIALPQGIWVSVQVLIGSVILQQVEENLLMPR 293 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G I + + FF L+ G + GL+G+F+ + ++ ++K Sbjct: 294 IMQGSINMNPVFMFFALLIGAKVAGLVGVFLSIPIAGVLISMFK 337 >gi|319891985|ref|YP_004148860.1| hypothetical protein SPSINT_0695 [Staphylococcus pseudintermedius HKU10-03] gi|317161681|gb|ADV05224.1| hypothetical protein SPSINT_0695 [Staphylococcus pseudintermedius HKU10-03] Length = 365 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 34/297 (11%), Positives = 102/297 (34%), Gaps = 12/297 (4%) Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + K+ I +++ + + + +++ L+ ++ + + Sbjct: 57 FQKMLEKRHLPRWASITIILLALTAMMAAVIGVIGPVIATQIENLIHQIPFIQREAERLI 116 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + + + T+ ++ S + L +N ++ I S + Sbjct: 117 NF--ALDQRDRLPDQVTEKINDIVSYFSQMASDLLSNSLNIISSIVST--------LFLL 166 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I + L + +D + ++ + + + + + + S G +++ G Sbjct: 167 ILVPFFLIYMLKDHERFIPAVANIFNGERKIFIVNLLKDLNQTLMSYIQGQVTVSLILGA 226 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 +L Y + G+ + L + + MIP G ++F I L + + + + Sbjct: 227 ILYIGYSIIGLEYTMLLVMFAIVANMIPFLGPWMAFLPAGI-LGLIQSPTTFIWVCVITL 285 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I + + P ++G + + L ++ G + + L A++ I + Sbjct: 286 IAQQLEGNVITPNVMGKSLNIHPLTIIIVILASGSLGGFTLILVAVPLYAVLKTIVR 342 >gi|168211406|ref|ZP_02637031.1| putative domain of unknown function [Clostridium perfringens B str. ATCC 3626] gi|170710661|gb|EDT22843.1| putative domain of unknown function [Clostridium perfringens B str. ATCC 3626] Length = 345 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 116/322 (36%), Gaps = 19/322 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + +++D+ M EL + + E + Sbjct: 94 KEGESFDGLINGIEF-------FINDLIMKMKFMEL---------GIFDVIEAQVTEKLN 137 Query: 147 DFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FA+ + + L+ + + ++F G +S + A K + Sbjct: 138 ILLVSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPIEKRALLKNL 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R V KV+ LG ++++ G++ + G+ + L + A++ +IP + Sbjct: 198 GRDVDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGA 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + L I I + P + I + + L+ G + Sbjct: 258 IPAIVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIG 317 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GLLG+ + +I V++ + Sbjct: 318 GLLGMVFIVPIAVVIKVLFDDW 339 >gi|167756725|ref|ZP_02428852.1| hypothetical protein CLORAM_02266 [Clostridium ramosum DSM 1402] gi|237734444|ref|ZP_04564925.1| predicted protein [Mollicutes bacterium D7] gi|167702900|gb|EDS17479.1| hypothetical protein CLORAM_02266 [Clostridium ramosum DSM 1402] gi|229382264|gb|EEO32355.1| predicted protein [Coprobacillus sp. D7] Length = 360 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 123/334 (36%), Gaps = 19/334 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L +++ + P + I F P+ + + S IA V L Sbjct: 43 VLSAIWLVS---KPFIVGFTIAFVLNPLINYIEKYVTKRS-----IAVTMVYLAAFAILT 94 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + + E +S++ A G L +I + + + I++ Sbjct: 95 LLISLAVPMIYESISEMFPAFYSG------LGEIGVFVKENFNYDISSLMRHIQNIVNAF 148 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 F + +D ++ + ++ + II I +++ S + + + P Y Sbjct: 149 FKDSVVLDTTIDVLNQVMINVTNFLIYIILAIYMS-SNFKNIRSHIRNITYRIDKTLPIY 207 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++I + + +++ F+G AI + + Y G P+ + LG ++ ++IP P Sbjct: 208 LREIDSSLVQYVKAFFIG----AIAQAITTMLMYLAIGHPNWLILGFVSGASSIIPYVGP 263 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + + + LF+ I+ I+ + P + I L + FG++ G Sbjct: 264 IVANCLGLITSLGMGTTTIVILFILIFIQSTIMSYVITPRIYSSRIDLSIMWVLFGILSG 323 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G+ I L+ + ++ + K Sbjct: 324 SSLFGIWGMVIAMPLLVSAKITFQVYKENHQNEK 357 >gi|258541540|ref|YP_003186973.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256632618|dbj|BAH98593.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256635675|dbj|BAI01644.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256638730|dbj|BAI04692.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256641784|dbj|BAI07739.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256644839|dbj|BAI10787.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256647894|dbj|BAI13835.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256650947|dbj|BAI16881.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653938|dbj|BAI19865.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 402 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 90/287 (31%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +SVM +V + L + EL+ ++ ++ L ++ H Sbjct: 115 LSVMLFVLVLVGALSLVVHVSGPELMVQLSHLHEALTSERDALHNMLNSNPLGHAVLDHF 174 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + T+ + +++ +IIA +F + Sbjct: 175 PRFLGGNMVPDGHAGTDNGMDFAGSMTNVLTSTFGSVGTMVVIIIAGVYFALSPHLYANG 234 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + + + G + G + S L G+P + LG++ Sbjct: 235 ILRITPVAYRSTMRTVLLTTGHALTAWVAGQMLDMTVVGCLTWSGLSLLGMPLALPLGLV 294 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +P ++ + + A + A + PF+ +++ Sbjct: 295 AGLANFVPYLGTFIGAVPALLIALSVGPREAMMVAGLYAAIQTFEGYVMSPFIQKRAVRM 354 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P T +G+ G + A++ + + N+E Sbjct: 355 PPALTILSQTIFGAFLGMWGFIFASPITAVLLAVASRLSAPLPPNEE 401 >gi|299132268|ref|ZP_07025463.1| protein of unknown function UPF0118 [Afipia sp. 1NLS2] gi|298592405|gb|EFI52605.1| protein of unknown function UPF0118 [Afipia sp. 1NLS2] Length = 365 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 116/348 (33%), Gaps = 31/348 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ I+ LY + FF PV++A+I+G P + + A+I ++ Sbjct: 36 ALLILAIVAVLYVGRAFFLPVVTAVILGTMLSPAAKRLEAFRVPRPVSAALIVVLTWAAF 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ L +PV W +P + P ++ Sbjct: 96 VLMIGLI----------------------SVPVMDWFGKLPELGPILKDKLHVFDRPLAI 133 Query: 134 KILSETFLKTNG-------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + + + + ++F + + F Sbjct: 134 WHQLQAMLGAPATAEPSLQLPKVAWVQPTIEFLSPTFTEILLFFAVLVLFIASWPDLRRA 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + H +I + + S L ++ I G G+ G A LA +P+ LG Sbjct: 194 LVMNFPNHDSRLRMLRILNAIETNLGSYLLTVSFINAGVGVATGIACALAQMPNPAGLGG 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGP 304 + A + IP PI A+ + + I L L A F+ + P ++G Sbjct: 254 LAATLNFIPIIGPILMFAILLCVGIVAMPTLGGALIAPLAFAGIAFVEGHFVTPTIIGRR 313 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L L F L G +G F+ L+ + ++ + I + Sbjct: 314 LSLNALAVFLALAFWTWLWGPMGAFLSSPLLIVGLIVKEHMIPERDQP 361 >gi|315126793|ref|YP_004068796.1| integral membrane transport protein [Pseudoalteromonas sp. SM9913] gi|315015307|gb|ADT68645.1| integral membrane transport protein [Pseudoalteromonas sp. SM9913] Length = 347 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 114/331 (34%), Gaps = 22/331 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + + I+L + P + A I P+ + F + Sbjct: 1 MASLTGVNKSLIIFAALVIVLAGIKAASAIVIPFILAAFIAIICSPLINFFARYRI--PK 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AV+ V ++ V L L + + + +P + + + Sbjct: 59 GIAVVLVVLIIMGLGVSLGGLVGQSVNDFSK-------------QLPEYKAQL----KEE 101 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +W ++ ++ I E L + A+ ++ +I+ + F + Sbjct: 102 FVWLVDMASQYNILINKEQILSMFDPGKMVDVATNMLTGLGSVMANMFLIILTVVFMLFE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + P K I S T++++ G++ G W+ V Sbjct: 162 GPILGKKIHLALDD--PDSKIKQIDRFLDSINSYLAIKTLVSLATGVIAGFYLWILDVDY 219 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V GV+ ++ IP G+ I+ + LI A + ++ + P Sbjct: 220 FVLWGVLAFMLNYIPNIGSIIAAVPALLLALITQGPLVAGLVGAGYLTINTVMGNIVEPK 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +G + L L F L+ +G +G+ + Sbjct: 280 YMGKGLGLSTLVVFLSLIFWGWLLGSVGMLL 310 >gi|86606339|ref|YP_475102.1| hypothetical protein CYA_1683 [Synechococcus sp. JA-3-3Ab] gi|86554881|gb|ABC99839.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 378 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 129/365 (35%), Gaps = 22/365 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTS-WPIYSSFISKK 55 M + ++ W+++ I +L+A ++ F +P+ + + Sbjct: 1 MNRFSPLQRLLLTWILIVISGWLALQVGRLFGHLLTTILTAAVLAFLLNYPVQ--VLRRY 58 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S + + L + + + ++ +L G +P W+ + Sbjct: 59 RVSRGLAVTLVFALSVVLLALVGIAVVPILAKQVVQL----------GARIPEWVDTLQS 108 Query: 116 GMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + LW + L T L + I + + + + ++ +++ Sbjct: 109 WLDQISLWAAERNINLGQTELVNTLLNRLQASAEKIAGQSLDILLGTFNQVIDLVLVLVL 168 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + G Q L SL + + + ++ + ++ L+L + Sbjct: 169 ALYMLLYGGQFWQGLLSLFPKPWGPRIGEALAL---SFQNFLISQLVLGFIMALMLVPIF 225 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 VP + G++ ++ +IP + LL +I+ + + L I + D Sbjct: 226 GFLRVPFGLLFGLLIGLLEVIPLVGGFIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKD 285 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + P L+G I L + L+ G + G+LG+ + L +++ +++ + A + Sbjct: 286 RVIAPRLMGELIGLNPVWILIALLVGAQLGGILGVIVAIPLTSVVKSLYEIARSADLAAE 345 Query: 354 EKISS 358 E + S Sbjct: 346 EGLDS 350 >gi|56460570|ref|YP_155851.1| permease PerM [Idiomarina loihiensis L2TR] gi|56179580|gb|AAV82302.1| Permease PerM [Idiomarina loihiensis L2TR] Length = 359 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 111/328 (33%), Gaps = 14/328 (4%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 AP+L A+ + + WP+ + S +I + L IV LL L + Sbjct: 39 IAPLLIAISLAYLLDWPVMR--LMGLGLSRLTATIITFSLFLALMIVTLLTLVPVIWQQS 96 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ ++ + + WL +P ++ Q +K + + ++ + Sbjct: 97 TTLIQEMPDMVTN---LQIWLHKLPEMFPTIVDDSQITEFTQEVKRRAVSLGESLLTVSL 153 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + +I + + +FF +D + L ++ + + Sbjct: 154 TSIV-----NVMAMLVYLIIVPLLIFFMLKDRDILIAHFSRLLPS-NRQLISQVGQEMNL 207 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I + G I + +V + L G+ L ++ + +IP GA ++ V + Sbjct: 208 QIMNYIRGKAIEVVVVAIVTFVTFSLFGLRYSALLSIMVGLSVLIPYVGAAVATIPVVLV 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + A + + +D L P L I L + ++ G G Sbjct: 268 ALFQFGPTAAFVWVTVAYLVIQALDGNLLVPLLFSEAISLNPVYIIGAVLIFGGIWGFWG 327 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEK 355 +F L +L+ + E E+ Sbjct: 328 VFFAIPLASLVKAVLTAWDSGTGEKAEE 355 >gi|229096468|ref|ZP_04227440.1| UPF0118 membrane protein [Bacillus cereus Rock3-29] gi|229115392|ref|ZP_04244800.1| UPF0118 membrane protein [Bacillus cereus Rock1-3] gi|228668112|gb|EEL23546.1| UPF0118 membrane protein [Bacillus cereus Rock1-3] gi|228687030|gb|EEL40936.1| UPF0118 membrane protein [Bacillus cereus Rock3-29] Length = 339 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 121/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFIVLIILAFVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVLYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|255656255|ref|ZP_05401664.1| hypothetical protein CdifQCD-2_11304 [Clostridium difficile QCD-23m63] gi|296450306|ref|ZP_06892066.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296878718|ref|ZP_06902722.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] gi|296260867|gb|EFH07702.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296430292|gb|EFH16135.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] Length = 353 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 66/336 (19%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I I+ + L FL P + + II PI + + T ++++ ++ L Sbjct: 17 VLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIKLITNNTNLNRTLISIVILLAFYGL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-WTKHLSHPQS 132 I L+ + ++ ++ + I L+ + + AS L Sbjct: 77 CIFLLISFGVKIFASVSDVFFRLPEIYKSSIQPT--LNTLFSKIDASTPNVNLALMLGWD 134 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 S L + + + L +I +IA FFF D I + Sbjct: 135 NISQSMMSLVASISTNALNAIASIASKTPAFMLKLIITLIASFFFTFDYQKIVNFILKQF 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 I + I+ + L + V + + VI A++ Sbjct: 195 PEKSQFMIINIKNSSINALLKLLKAYAILLSVTFIELLIGLTILKVENAFTISVIIALVD 254 Query: 253 MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P G T I LI GNI N L I + +V + L P +VG I L L Sbjct: 255 ILPVLGTGSILTPWMIISLINGNI-NLAIGLLILYIIITVVRQILEPKVVGHQIGLYPLI 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + G + G+ GLF P+ +I + I+ Sbjct: 314 TLMCMFVGAQLFGIAGLFGFPIAATIIKNLHDNGII 349 >gi|182415952|ref|YP_001821018.1| putative phytochrome sensor protein [Opitutus terrae PB90-1] gi|177843166|gb|ACB77418.1| putative phytochrome sensor protein [Opitutus terrae PB90-1] Length = 821 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 30/332 (9%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+ +L++ F P+ + A++ TV++ I + + + Sbjct: 85 MIPLALSLMLAFLLSPVVVRLRRWRL--PQPAAILLTVTLAFSVIG---VVAWQITNQAL 139 Query: 91 ELVSKVVLANQHG------IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 L+ ++ ++ + P S + + + E L P S Sbjct: 140 ALLQELPRYEENLRKKAADLKQPDASSAVTRAIVSLERTWAELQQPAP-DTHSSPATPPG 198 Query: 145 GIDFIP-------RFASRFGMIFLDYCL------SIIFMIIALFFFYRDGFSISQQLDSL 191 +P + G L + I+ + + + F RD S+ + + Sbjct: 199 APKPVPVEVKEGDATSLDIGRQVLSSLIKPLSTAGIVIVFVIVILFQRD-DLRSRFIRVI 257 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 G + + +V R L ++ G+ +G + GVP G+++ ++ Sbjct: 258 GGGQLNVATEAVDDAAQRVSR-YLLAQLMVNTFFGVAVGLGLFFIGVPHAALWGLLSTLL 316 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP PI + L + + + L + + + + + G + Sbjct: 317 RFIPFLGPIIAVIFPLALSVAVDPGWSMLLWTAALYIVAELVTNNIIETLVYGSSTGISV 376 Query: 310 LPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 L V G+ GLF+ P+ + L+ + Sbjct: 377 LALLIAAVFWSWLWGMPGLFLSTPLTVCLLVI 408 >gi|170739370|ref|YP_001768025.1| hypothetical protein M446_1060 [Methylobacterium sp. 4-46] gi|168193644|gb|ACA15591.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 645 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 100/327 (30%), Gaps = 13/327 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F P++ A+++ F P+ + + S AV+ + V+ + Sbjct: 46 FIPLVLAILLSFVLAPVVNLLRRLRLGRVPSVIAAVLLALGVILAIGGVIGLQVADLAKN 105 Query: 89 M---KELVSKVVLANQHGI-----PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + V + V Q G+ + R + + + + Sbjct: 106 IPAYQSTVQRKVSTLQEGVLGRANDLIRRFNRQVSEVSSQAAAPDAAGAAAGAQAPRAVL 165 Query: 141 LKTNGIDFIP-RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +K D P A + + + +++ + F + +L L Sbjct: 166 VKVQEPDTSPLVLAEKVLGPVVSPLTMVGIVLVVVIFILMQREDLRDRLIRLFGASDLHR 225 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + FL + G+++G W GVPS + GV +A+M +P Sbjct: 226 TTMAMDDAAGRLGTFFLAQLGMNAAFGVIVGVGLWFIGVPSPILWGVFSALMRFVPYIGA 285 Query: 260 IS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + V++ + A + + + + P L G L + Sbjct: 286 LISGVFPVALAAAVDPGWSMALWTAALFLVAEPVFGQVVEPLLYGHSTGLSPFSVIVSTL 345 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G +GL + + V+ + Sbjct: 346 FWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|309780744|ref|ZP_07675485.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gi|308920426|gb|EFP66082.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 350 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 121/346 (34%), Gaps = 14/346 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + ++ +Y + + A+ + +P+ + + I V ++ + Sbjct: 15 VFLFALAVLIIYKIASVLLVTVFAVFFSYLLYPLIEQLERRMPRQAPRSVSIGVVFILVV 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + ++ + ++E ++ + + + L + L + Sbjct: 75 LV--VIVAGSVFGVTVQEEAGRLADQLPKLLDTSTMADRLALPNFLEPLRARILEFLREQ 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDS 190 + D G+ + ++++++ I F + SI L S Sbjct: 133 L--------STTSDQAMPLVRNIGLGVMHAASNLVYLVLIPIMSFLMINEAPSIHAALLS 184 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 W I + ++ + ++++ L A++L GVP + L A+ Sbjct: 185 WIRSSDKRLWGNIIDDLDTLLSRYVRALLLLSLATLLFYSIAFYLLGVPYALLLATTAAV 244 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP P++ + + + + L + + D L P+L+ +K+ L Sbjct: 245 LEFIPFAGPLAAVVAIVTVAVFSGYPHLFWLIGFIVVYRLFQDYVLNPYLMSEGVKVSPL 304 Query: 311 PTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 GL+ G + G+ G+F+ PV+ AL V+ + + + Sbjct: 305 LVIVGLLAGEQLGGVAGIFLSVPVIAALKIVLSRAWAAQSLGREAR 350 >gi|229916029|ref|YP_002884675.1| hypothetical protein EAT1b_0297 [Exiguobacterium sp. AT1b] gi|229467458|gb|ACQ69230.1| protein of unknown function UPF0118 [Exiguobacterium sp. AT1b] Length = 366 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 116/320 (36%), Gaps = 12/320 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P++ + I + S + +I ++ + + + ++ LF + Sbjct: 42 LTPIIMGIAIALLLNTVLSYIEERFHLKRYQGLLIVYITFIGILAISVVTLFPRIYSSLS 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + +PV D+ G + L + + Q++ + ++ Sbjct: 102 SLI--------NELPVYIRQIDVFLGEVNNYLKDYNATIAQAIDFARFEDRYSGWVETAV 153 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK----ISRI 206 + + F ++ + I+ + +D ++ L L P K I + Sbjct: 154 LSSVSYVSSFTMTLINFLIGIVISIYLLKDKEVFARMFKRLLYALLPVGTAKTTIDIFQE 213 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + + +G ++ + G++ + G P + LGVI ++ IP P+ + Sbjct: 214 MDYIFKRYIIGKSLDCLIIGVLAVIGLLIIGAPYALLLGVIVGVLNFIPYVGPLLGMIPA 273 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + F A + L+ + L P ++G + + ++ G GL+ Sbjct: 274 FIITYFYDPFTAVLVLLFIFLLQQFDGLWLGPKILGDSVGITPFWVITSIIIGGSLFGLI 333 Query: 327 GLFIGPVLMALIAVIWKESI 346 G+F+ + A+I V+ I Sbjct: 334 GMFVSVPITAMIQVVLSRLI 353 >gi|166368038|ref|YP_001660311.1| hypothetical protein MAE_52970 [Microcystis aeruginosa NIES-843] gi|166090411|dbj|BAG05119.1| hypothetical protein MAE_52970 [Microcystis aeruginosa NIES-843] Length = 365 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 129/337 (38%), Gaps = 17/337 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ +L+ + ++A ++ F + + ++ + + I + + + IV Sbjct: 27 LLFQLFSYLEPLVSIFVTASLLAFVLD-VPIKLLQRRGVNRSGSIAIVFLIALLILIVLG 85 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L L + ++ L++ + P+W+ + E W K + ++ Sbjct: 86 LILIPQIVEQLSSLINSL----------PQWIESGTEQIQNLEKWDKTQKYAIYIEQSIT 135 Query: 139 TFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + TN + + F + ++ L+I+F+++ F G I + + S Sbjct: 136 QLSERLTNVLQTLSTQLLSFVLGTINSILNILFVLVLTVFLVLYGEQIWEGIFSWIP--- 192 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + K+ I+ + + F G TI+A L + + V + GV + +IP Sbjct: 193 APWNLKLRTIIRQTFETYFAGQTILAGILSLAQIFVFVILKVDYALLFGVAIGLTTLIPF 252 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + +S LL+ + + + I I D + P L+GG I L + L Sbjct: 253 ASAFAIIGIS-TLLMFQDFWLGLKVLTLTIIVGQINDNVIAPRLMGGMIGLNPVWIILSL 311 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + G+LGL I + +++ +E + Sbjct: 312 FIGGKVAGILGLLIAVPIASVLKSTIDIIRSQQREKE 348 >gi|87121490|ref|ZP_01077379.1| putative membrane protein [Marinomonas sp. MED121] gi|86163333|gb|EAQ64609.1| putative membrane protein [Marinomonas sp. MED121] Length = 358 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 114/331 (34%), Gaps = 22/331 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E+ ++ + + II+ L P + ++ I P+ + K Sbjct: 1 MAESHRATYFLVGFAALIIIIAGLKAASAIVVPFMLSMFIAIIFAPLLAWLARHKV--PI 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AV+ V +M + L+ + + +P + + + + Sbjct: 59 GIAVMLVVLLMIFSVGSLVIFVGSSLDDFYAA-------------LPGYKARLSNELVGI 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 H+ S++ + F + + + S G + + + ++ +I LF + Sbjct: 106 TDLLHHMGLSVSVEKIRSYFDPSILMQVVTNALSSLGGVLTNVFVVLMTVIFILF----E 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +L + + + + + T+++I G V+G W+ GV Sbjct: 162 AADFPTKLSAAMDDATGSLKRFKD--FSNAVNQYLAIKTLVSILTGFVIGIWLWIIGVDF 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF 299 + GV ++ +P I ++ L A+ L G + + IV + P Sbjct: 220 PLLWGVSAFLLNFVPNIGSIIAAIPAVMLAFVQLGGVASGLAALGYLAINLIVGNIIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +G + L L F L+ G +G+ + Sbjct: 280 YMGKGLGLSTLVVFLSLILWGWVFGAVGMLL 310 >gi|72005299|ref|XP_783596.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115960849|ref|XP_001193862.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 837 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 6/187 (3%) Query: 157 GMIFLDYCLSIIFMIIALFFFYR--DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 G L++ +S + + LF+ D + + S + K + V IR Sbjct: 617 GTAILNFIISFVVFMTTLFYLLSFSDKQYLPMKWISSLTPGNDSTSSKYGQAVENSIRGV 676 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKG 273 F ++ GL + + G+ + A+ IP G + I LL+ G Sbjct: 677 FGASIKMSTFYGLYTWLTHTIFGLQIVYVPSALAALFGAIPFVGTYWAAVPGVIELLVHG 736 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 A LF+ + +++VD + + GG T + GG+ GL G IGP+ Sbjct: 737 EKVLAVMLFVVQMLPMYVVDTAIYSDIKGGG---HPYLTGLAVAGGIYCYGLEGAIIGPI 793 Query: 334 LMALIAV 340 L+ ++ V Sbjct: 794 LLCVLLV 800 >gi|229492836|ref|ZP_04386634.1| hypothetical protein RHOER0001_4143 [Rhodococcus erythropolis SK121] gi|229320276|gb|EEN86099.1| hypothetical protein RHOER0001_4143 [Rhodococcus erythropolis SK121] Length = 382 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 110/318 (34%), Gaps = 21/318 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 G PV AL++ PI + ++ ++ ++ + L ++ L Sbjct: 49 VFGGILGPVFLALVLTIAVQPIQDWSQRRGW--PKWVGMLGSLVTVYLILLGLAASLIVS 106 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ ++ + + + R L+ ++ L + Sbjct: 107 TAQLATILPQYSEEMTNLLNEGR----------------DKLADFGVSTEQIQSTLSSVD 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L ++F++ L F DG SI +L L E + Sbjct: 151 LTKVVGVLESGLEGLLGILSDLVFILALLLFMAFDGMSIRSRLHVLSEQRPEISYA--LS 208 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 R + T+ + ++ G A WL G+ V +++ I IP G I Sbjct: 209 TFAAGTRKYLVVSTVFGLIVAVLDGGALWLMGIQLPVLWALLSFITNYIPNIGFVIGVIP 268 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ L++G + + + ++ F++ ++P VG + L TF LV +G Sbjct: 269 PALLGLLQGGPWLMLWVIVVYSVINFVIQSIIQPKFVGDAVGLSVTMTFLSLVFWSWVLG 328 Query: 325 LLGLFIGPVLMALIAVIW 342 LG + L L+ + Sbjct: 329 ALGALLAIPLSLLVKAVL 346 >gi|119511687|ref|ZP_01630792.1| hypothetical protein N9414_06044 [Nodularia spumigena CCY9414] gi|119463672|gb|EAW44604.1| hypothetical protein N9414_06044 [Nodularia spumigena CCY9414] Length = 365 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 120/327 (36%), Gaps = 21/327 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W+I + + F L A I+ + P+ F K + + + +S + + Sbjct: 26 WLIFLFLKSFQELVTIFILATLLAFILNY---PV--KFFEKAGVNRNYAVALVLISALVI 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F V + L + + E+V + P+W+ W + Sbjct: 81 FAVFGIVLLPIILPQFNEMVKLL----------PQWIDASGEKFQLLNNWAISHGLNINF 130 Query: 134 KILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + F + N ++ I + +D I+ ++ F+ D I + Sbjct: 131 SEIISDFTERLPNELENITDNLFSIFIETVDSVSDILITVVLTFYILLDSPRIWSGI--- 187 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + L ++ K+ R + + ++ +G +A G +L + + V + G+ I Sbjct: 188 FKKLPWSFTDKVQRSLQQNFQNYLIGQVTLASLMGCLLTVIFLVFQVQFGLIFGLGVGIF 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++IP G +S + +++ + + L + + F +D+ + P L+G L + Sbjct: 248 SLIPFGDVVSISLITLIIAAQNFWLAVKVLAVAVVTDQF-IDQAIAPRLLGKFTGLRPIW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALI 338 L+ G GLLGL I + I Sbjct: 307 VLVALLLGTSIGGLLGLLIAVPIAGFI 333 >gi|290994094|ref|XP_002679667.1| predicted protein [Naegleria gruberi] gi|284093285|gb|EFC46923.1| predicted protein [Naegleria gruberi] Length = 531 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 75/199 (37%), Gaps = 6/199 (3%) Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 F D+ S I+ +F+F ++ + + L + + I T Sbjct: 297 SNFKDFVFSSFIFILFVFYFVQNDEFFIDSMKRISP-LTEEESTILIDSIDTNIIKTLYY 355 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLI-KGNI 275 + AI +V ++++ G G ++A +++IP + I + +I++L G I Sbjct: 356 LCTFAICNFIVTTLSFYIVGFEIIFIFGFLSAFLSVIPIISNWIIWIPATIFVLSRDGII 415 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + I L+++D + ++ GV G+ GP+ + Sbjct: 416 SSNWIIIFASHISLYVIDNIIYTNFFKKQ---HPTMLGVSILLGVYVFNHSGIIKGPLFI 472 Query: 336 ALIAVIWKESIMAIKENKE 354 L + + I ++K+ Sbjct: 473 TLGMTFFDIATKYINKDKK 491 >gi|184155466|ref|YP_001843806.1| putative transport protein [Lactobacillus fermentum IFO 3956] gi|183226810|dbj|BAG27326.1| putative transport protein [Lactobacillus fermentum IFO 3956] Length = 366 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 118/331 (35%), Gaps = 15/331 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----KEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P+L +I + + + K + + A + + + L IV ++ + + Sbjct: 41 MPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLSIVVVIGVVSSVV 100 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 K++ + Q + +P++++ + + LW + + + L Sbjct: 101 APQLVACVKLLFSGQSKV-IPQFINWLENESFLKSLWQQIDLSKINWTKVQSYLLNGASG 159 Query: 147 DF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F + AS+ ++I F I L F +++Q L P +I Sbjct: 160 SFSTVMSTASKVVSALTTTVVAIFFSIYLLLFK----DRLARQFKLLLTTYLPGQVARIL 215 Query: 205 RI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 R+ + S +G A+ G + +P +G + A+ A++P + Sbjct: 216 RVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTALVPIIGALM 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +V I ++ + A + ++ P +VG I LP + F ++ G Sbjct: 276 GASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVFVAVMVGGG 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+LG+ L A + K + + N Sbjct: 336 VSGILGMMFTVPLFAAFYQLLKTDVAKRQLN 366 >gi|226949920|ref|YP_002805011.1| hypothetical protein CLM_2872 [Clostridium botulinum A2 str. Kyoto] gi|226841709|gb|ACO84375.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto] Length = 342 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 117/319 (36%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ F+ +K + F A++ V+++ + ++ + Sbjct: 31 IVRDILSLFFISFVIYYVLKPIHT-FLKQKGINEKFSALLLVVTLIMIIGAFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V + ++ I + + E + + G Sbjct: 90 IKEGYNITSSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIG 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F G LDY + + I +++F G I Q+ + K + Sbjct: 143 ENILNKFVG-LGENILDYAV----IPIIVYYFLAAGDKIIQKFFIIFPVKIRGMVKNVFE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + ++ +I+++ Sbjct: 318 AGMVLAIPIGVIMKIIYED 336 >gi|330722169|gb|EGH00069.1| Putative transport protein [gamma proteobacterium IMCC2047] Length = 357 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 107/315 (33%), Gaps = 27/315 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L ++ I P + + LA++ V+ + +F V + + + + Sbjct: 33 LVPFLLSIFIAVICGPPLAWMTKR--GVPLILAMLVVVAFIVVFGVAVGAIVSTSINDFS 90 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + +P + + W + + + E + + Sbjct: 91 Q-------------DLPVYQEKLSTITATFLAWLGGMGFDLPINQIQENIKPGTVMGMVG 137 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVP 208 + + G + + L ++ +I L S S S E K + Sbjct: 138 KALASLGNVMTNAFLILLTVIFIL--------SESAMFHSKLERAAGEGSKSLQAIERFT 189 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSI 267 I T +++ G+++ W+ GV V G++ ++ +P G+ I+ + Sbjct: 190 SSINQYMAIKTGLSLLTGVLIMCWLWIIGVDYPVLWGLVAFLLNFVPNLGSIIAAVPAVL 249 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LI+ +A + +V L P ++G + L L F LV +G +G Sbjct: 250 LALIQLGTGDALLTAVVYVFANVLVGNVLEPRMMGKGLDLSTLVVFLSLVFWGWVLGPVG 309 Query: 328 LFIG-PVLMALIAVI 341 + + P+ M + + Sbjct: 310 MLLSVPLTMTVKIAL 324 >gi|86748515|ref|YP_485011.1| hypothetical protein RPB_1390 [Rhodopseudomonas palustris HaA2] gi|86571543|gb|ABD06100.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 368 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 120/330 (36%), Gaps = 16/330 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ +++ LY K FF P+++A ++G P + + + V + + Sbjct: 36 ALLIIVVIGLLYVAKPFFLPIVTAFVVGTMLSPAATYLERWRIPRA--------VCAVLI 87 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + L L+ + G+ + LS LW + S Sbjct: 88 VALALAGVGFMVALISVPLIDWTSRLPELGVILRDKLS---FFERPMGLWRQLQSALGGT 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + ID++ + F L L + ++ ++D + + G Sbjct: 145 EPAVPAPSQMPQIDWM-QPTLEFLSPTLTEFLLFLVTLVLFIASWKDLRR--ALVMNFGG 201 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + + + L +TII + G G LAG+P+ LG + A + Sbjct: 202 RDARLRTLRILNEIEQSLGGYLLTVTIINLCYGAATGVLCALAGMPNPAGLGALAATLNF 261 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP PI + + I L L A+ F+ + P ++G ++L L Sbjct: 262 IPVIGPIVMFVILTLVGIISMPTMGEGLLAPLGFAVLTFVEGHFITPTIIGRRLELNALA 321 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F L G +G F+ L+ + V+ Sbjct: 322 VFIALAFWTWLWGPMGGFLASPLLIVGLVL 351 >gi|154150909|ref|YP_001404527.1| hypothetical protein Mboo_1366 [Candidatus Methanoregula boonei 6A8] gi|153999461|gb|ABS55884.1| protein of unknown function UPF0118 [Methanoregula boonei 6A8] Length = 348 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 126/335 (37%), Gaps = 20/335 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 V+ + + P++ + + A T+++ L + Sbjct: 24 IFWPVLDMVVLSASLAVVLMPVHHRLMRSVP--AVVSAAALTIALFTLVAA-AAYCTDLV 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L++++ G W + T+ + S+ + F G Sbjct: 81 LRQNAGLINQIFGTI---------------GTWLANPATQPGAFGVSISKDTLLFWVAKG 125 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L + ++ F F G ++ ++ +Y + ++ Sbjct: 126 NALFVNYWATITANILLIVFKGLVFFLSFFLFLLRGIALRDRIFRHLPVQVRSYCELLTP 185 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + ++ IA ++ ++L G + + + A +IP G+ ++F Sbjct: 186 VTVDTLYVIYIVQFAIAALTFVISLPVFYLLGYGNILFYSFLAAFCELIPILGSSVAFII 245 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V Y L G++ + + G I + + + +RP LVG +K+ + F GL+GG+ T+ Sbjct: 246 VGAYSLALGDLRGLLIMVILGYIVVSALPEIYIRPVLVGRRVKINPVIMFVGLIGGLLTL 305 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL G +GP+++ L+ ++ K +KE + Sbjct: 306 GLAGFVLGPLIIVLVMKSYRIWTDERKGSKEPQDA 340 >gi|149925951|ref|ZP_01914214.1| hypothetical protein LMED105_02845 [Limnobacter sp. MED105] gi|149825239|gb|EDM84450.1| hypothetical protein LMED105_02845 [Limnobacter sp. MED105] Length = 385 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 109/332 (32%), Gaps = 12/332 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L AP ++A ++ + K + V + F LL G+ Sbjct: 53 LWPVLAPFVAAFVLAYLLAAPSRWVHGKLRGR-----IPLPVCAVLTFFALLLIFSSVGL 107 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L + +++++ L + + + +K ++ N Sbjct: 108 LFIPVVLTQLELIQSNLPQLIVNVKRTVLPWLNEAFGLTISVDSTEMKDRIAAYISENRG 167 Query: 147 DFI---PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + L + +IA F I++Q + + + Sbjct: 168 TLAELSTKILRSGSQSVLGITGFVSLTVIATLFILPGWTQITKQFQQVFPPHLWKRAQPL 227 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + V+ GM I+ + + G+ S ALG++ ++ ++P Sbjct: 228 FSEIDSVMTEYIKGMMIVMLFLSTFYSIGLSVVGLQSGWALGMLAGVLCVVPYLGFAVAL 287 Query: 264 AVSIY---LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V + L ++G + L ++ + F+ L P +VG I L L F L Sbjct: 288 LVGLLTAALELQGFLPIFLVLLVF-VVGQFLEGFVLTPLVVGDKIGLSALAVIFALAFFG 346 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GL+G+F+ L A+ V + + +++ Sbjct: 347 AVFGLVGVFLALPLAAIFKVAYLHAFAHYEQS 378 >gi|46190495|ref|ZP_00206488.1| COG0628: Predicted permease [Bifidobacterium longum DJO10A] gi|189440703|ref|YP_001955784.1| permease [Bifidobacterium longum DJO10A] gi|189429138|gb|ACD99286.1| Hypothetical permease [Bifidobacterium longum DJO10A] Length = 563 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 70/212 (33%), Gaps = 2/212 (0%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++T+ + A + L+++ +++ ++ G + + + Sbjct: 175 IQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRF 234 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGA 258 + + I S +I+A+ + VP + L + +++ IP G Sbjct: 235 LLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPLALFCGVVSQFIPTVGT 294 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I ++ A + ++ + I + L P + + + F ++ Sbjct: 295 YIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQRTMDINAAVAFLSVLA 354 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G F+ + A + I++ + Sbjct: 355 FGSLFGAFGAFLALPVTASLQAIFRAYTRRYE 386 >gi|261405457|ref|YP_003241698.1| hypothetical protein GYMC10_1608 [Paenibacillus sp. Y412MC10] gi|261281920|gb|ACX63891.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 387 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 101/316 (31%), Gaps = 10/316 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++IM I F L LII +S F+ ++ F A I+ + + + Sbjct: 23 YLIMLIFSKLYQIAAPVFLSFLVFLIIE-----PFSKFLHRRGLPKPFAAAISVLLFLLV 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + L + Q + + + L+ + Sbjct: 78 ILGILFGAGALIVSQFMNLQDNLPAYTQTI--QKHFSETLMFLQTKLDALPPDLTDRLNG 135 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + R+ F F + + II FF + S + Sbjct: 136 YFQDITTFAQGAAESFFRYIVGFMGSFSSFIANFGVAIILAFFLSTEIGSWRRIAKDKTP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + V K I S + +++ + G + +++ +I A+ + Sbjct: 196 KTLKTAFVFLKDNVFKAIGSYIKAQMKLVSITFVIVYIGLLILGTGNSLSVALICAVFDV 255 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P G P+ YL I GN A L + A+ + I + L P + G I + Sbjct: 256 LPLLGVPVILIPWITYLFIVGNTGLAIGLIVLLAVVV-ISRQLLEPKITGNSIGVSSAFL 314 Query: 313 FFGL-VGGVRTMGLLG 327 + + G+ G Sbjct: 315 MLSFMMISLSIFGVAG 330 >gi|40225713|gb|AAH14248.2| C9orf5 protein [Homo sapiens] Length = 340 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 9/190 (4%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIR 212 G L++ LS+I + LF+ + + + SL P I + V + IR Sbjct: 110 GTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIR 169 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI 271 F +A GL + + G+ + AI+ +P G + + L + Sbjct: 170 GVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWL 229 Query: 272 KGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + A L ++ + + VD + + GG T + GG +GL G I Sbjct: 230 TQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAII 286 Query: 331 GPVLMALIAV 340 GP+L+ ++ V Sbjct: 287 GPILLCILVV 296 >gi|146276452|ref|YP_001166611.1| hypothetical protein Rsph17025_0400 [Rhodobacter sphaeroides ATCC 17025] gi|145554693|gb|ABP69306.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 357 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 108/314 (34%), Gaps = 14/314 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + I + P+ S + +V ++ + ++ +L + ++ Sbjct: 30 ILPFIVGGAIAYFLDPVADRLERA-GLSRVAATSLISVGMLLVVVLLVLAVIPTLASQLT 88 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + +L + + Q+L + +T + G + Sbjct: 89 ALIDAAPTIFRQL--------HTFLLEHFPQLSDETSTMRQTLLSIGDTIKQRGGE--LA 138 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 ++ + ++ + + F+ D + ++DS ++++ + +V Sbjct: 139 NTVLISAYGVINALIFVVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRRLASEIDEV 198 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G + + G A G+ + +G I + IP + A++I L Sbjct: 199 LAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAIGLA 258 Query: 271 IK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + G+ + A+ F+ + P LVGG + L L F L G +G Sbjct: 259 LFQFWGDWLAIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFGFVG 318 Query: 328 LFIGPVLMALIAVI 341 + + + A I V+ Sbjct: 319 MLVAVPVAAAIGVL 332 >gi|69246510|ref|ZP_00603973.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257878313|ref|ZP_05657966.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257889486|ref|ZP_05669139.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257892572|ref|ZP_05672225.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260559863|ref|ZP_05832042.1| conserved hypothetical protein [Enterococcus faecium C68] gi|314938633|ref|ZP_07845913.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314944077|ref|ZP_07850740.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314950315|ref|ZP_07853596.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314951087|ref|ZP_07854149.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992327|ref|ZP_07857761.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314996889|ref|ZP_07861893.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195240|gb|EAN09694.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257812541|gb|EEV41299.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257825846|gb|EEV52472.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257828951|gb|EEV55558.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260074087|gb|EEW62410.1| conserved hypothetical protein [Enterococcus faecium C68] gi|313588996|gb|EFR67841.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313593143|gb|EFR71988.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313596721|gb|EFR75566.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597304|gb|EFR76149.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313642021|gb|EFS06601.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313643332|gb|EFS07912.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 359 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 119/356 (33%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 19 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 79 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDAD-----PVLQYIHTY 133 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 134 IERNDFFEQL----------QNGASIALGYLQDIGKMAVAFAMSFILS----FFFMIEKK 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ I K + + +IA+ L+ A + G Sbjct: 180 KTIVFSRLFLKSEFSWFFQDIYYFADKFVNTFGLVLEAQFVIALLNTLLTTIALAVFGFH 239 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + I I L P Sbjct: 240 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ +LP TF L+ R G+ GL +G + + K + KE Sbjct: 300 KLMSSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHLPKE 355 >gi|303238498|ref|ZP_07325032.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302593896|gb|EFL63610.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 375 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 76/206 (36%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + L++ F I LF + + +++ + R + Sbjct: 169 VSLVGTIFGKIMSFILALFFSIYILFSKEDLKYKFEKLINTFMRADRRKKLYNVLRTANE 228 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 S +G A+ G++ + G P +G + + A+IP A+ L Sbjct: 229 SFSSYIVGQCKEAVIIGVLCTLGMVIFGFPYATVIGPVIGMTALIPMVGAYIGAAIGFLL 288 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ + A L+ I + + P +VG + LP + F + G +G+ G+ Sbjct: 289 IVTDDPIKALLFILFIVILQQVEGNLIYPKVVGESVGLPGIWVFAAITVGGGLLGISGIL 348 Query: 330 IGPVLMALIAVIWKESIMAIKENKEK 355 G + A I + +S+ ++ + + Sbjct: 349 FGVPIFATIYKLVSQSVNERQKARRE 374 >gi|296532431|ref|ZP_06895157.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296267241|gb|EFH13140.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 342 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 89/262 (33%), Gaps = 12/262 (4%) Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETF--------LKTNGIDFIPRFASRFGMI- 159 WL+ P + LW + L + G +P+ M+ Sbjct: 75 WLAAAPIAEQLNTLWQEVPRAAAGLADRLSDYQWGQELLRRLNAGEMSLPQGGGSTAMVA 134 Query: 160 ---FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 +++ + +F D + +++L + R +R Sbjct: 135 VNTTFGALANVVLVGFLGLYFALDPALYRRGIEALLAPSLRPRAHALCRESAATLRGWLG 194 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 + + G++ G+ WL G P LG+I A++ IP P+ ++ L + + Sbjct: 195 AQLVSMLVVGVLTGTGLWLIGTPLAPVLGMIAALLTFIPTLGPVLAAVPAVLLGLADGVS 254 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + I + P++ + LP T LV G LG+ + + A Sbjct: 255 GALSVVAVYLVVQTIESYFITPYVQKRSVDLPEAATIIALVAFGLLFGFLGMLLATPMAA 314 Query: 337 LIAVIWKESIMAIKENKEKISS 358 L+ ++ + + ++E Sbjct: 315 LLLMLVRRLYVEDYLDQEPPEE 336 >gi|148243672|ref|YP_001219912.1| hypothetical protein Acry_3145 [Acidiphilium cryptum JF-5] gi|148243720|ref|YP_001219960.1| hypothetical protein Acry_3196 [Acidiphilium cryptum JF-5] gi|146400235|gb|ABQ28770.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|146400283|gb|ABQ28818.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] Length = 660 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 112/360 (31%), Gaps = 25/360 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + G+M + + + + +L + P+ A+++ F P+ + + + Sbjct: 16 AINDTSGLMTLISVVVAVATLSIARDVLIPITLAVLLSFLLAPLVN-LLRRTGLGRVPGV 74 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR----WLSDIPGGMWA 119 V+A + + + + + ++ Q V LS G M + Sbjct: 75 VLAVLLALGVILGTAGLIGTQVADLADDIPRYTDTIQQKVDAVQSATFGRLSAFVGSMGS 134 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDF-----------------IPRFASRFGMIFLD 162 H S + + + + A R L Sbjct: 135 QINRDSHASAGAPASAGTTVSAASAAAPTNAAAKPIPVEVHQPEPSLMKLARRVLTPILS 194 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++ +++ F + +L + + FL + + Sbjct: 195 PLMTTAIVVVVAIFILLRPEDLRDRLIRMLGTGDLHRTMTAMDEAGHRLSRYFLTLLALN 254 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 G ++G ++ GVPS V G++ +M IP P A+ + L + + L+ Sbjct: 255 TAFGSMIGLGLFVIGVPSAVLWGIMAILMRFIPYIGPWLAAALPLALAAAVDPGWSMLLW 314 Query: 283 LWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + ++ + + P G L L + G +GL + P+ + L+ Sbjct: 315 TGTLFVVSEGVMGQVIEPMAYGHSTGLSPLSVVVAAIFWSWLWGPVGLILSMPLTLCLVI 374 >gi|227529755|ref|ZP_03959804.1| permease [Lactobacillus vaginalis ATCC 49540] gi|227350239|gb|EEJ40530.1| permease [Lactobacillus vaginalis ATCC 49540] Length = 351 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 121/354 (34%), Gaps = 24/354 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R++++ +I+ L+ L+ +L I+ F + + ++ Sbjct: 13 KLRRFVVLALIIFILWLLRPMMNLILFTFILTFIVVSWVRWLQRHVPK------ISIKLT 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +I ++ +++ + LV++V+ I I ++S Sbjct: 67 VVVTYIALIVAIYFGVTRYLPVLVNQVIKMVNSVIKFYSSRQAI----EIMHYVNHYISW 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +G+ + G + + + LS I FF+ + ++ Sbjct: 123 GTIMSQM------KHGVTLAVSTLTSIGTMTITFLLSFILS----FFYTLELKQMNAFSR 172 Query: 190 SLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + F ++ I + IAI ++ +P AL + Sbjct: 173 TFLDSDFGWFFSDIDYFGKKFVNTFGVVLEAQFFIAICNTVITSICLAFMHMPQIFALAL 232 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I +++P G IS +S+ G I + + + + + L P + Sbjct: 233 MVFIFSLVPVAGVIISLIPLSMVAYSVGGIRDVIYIIIMICVIHALEAYVLNPKFMASKT 292 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G GL +G + + I + K + ++ Sbjct: 293 ELPIFYTFIVLLVAEHFFGTWGLIVGVPIFTFLLDILGVKSIKKKPHSLRVHHQ 346 >gi|189500521|ref|YP_001959991.1| hypothetical protein Cphamn1_1589 [Chlorobium phaeobacteroides BS1] gi|189495962|gb|ACE04510.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides BS1] Length = 355 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 122/342 (35%), Gaps = 15/342 (4%) Query: 20 ILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 IL ++ L G AP + A ++ + P+ + + + A++ T + + Sbjct: 11 ILFGIWIFSELSGLLAPFIIAFVLAYLFEPLMNFLLKNQIPR-VLSALLITFFGVGGITL 69 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ L ++ + + + V W+ W S S+ +L Sbjct: 70 VIVLLLPEIASQISAFAGIIPMIPGYLQNVINWVFSFEVFSWFSIDIESITSNINALFKK 129 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + +F + +++ + F+F D S + +L Sbjct: 130 QFEDIGSLATNFTQTILKSI-PKVISAITTVLLLPFLTFWFLNDFDKFSGAIRTLLNKRP 188 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + K + ++ G+ I+ E ++ + + + G+ + LG+I+ +P Sbjct: 189 DSPVHKYILMAREIFNQYVRGLIIVMTIEMVLYSTTFSIIGLNYPLLLGMISGAALWLPY 248 Query: 257 GAPISFTAVSIYLLIKGN------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ ++ G+ + A+E+ + P +VGG + L + Sbjct: 249 IGISTAILLTSLVIALGSNPAEQFFWVGLTYLSIQALEIL----FMVPKIVGGKVHLNPI 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F ++ G+ G+F+ + A I + +E + + E Sbjct: 305 ILFLSIILFGYFFGIPGIFVSIPVSAFIVAVIREKLYSSTET 346 >gi|154502815|ref|ZP_02039875.1| hypothetical protein RUMGNA_00629 [Ruminococcus gnavus ATCC 29149] gi|153796698|gb|EDN79118.1| hypothetical protein RUMGNA_00629 [Ruminococcus gnavus ATCC 29149] Length = 450 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 117/344 (34%), Gaps = 24/344 (6%) Query: 31 FAPVLSALIIGFTSWPI-------YSSFISKKEESSTFLAVIAT-VSVMCLFIVPLLFLF 82 P++ L+I + PI + +I +K I+ ++ +V + Sbjct: 74 LKPIIYGLVIAYLLNPIVKLVDTHFEPWIKRKFPRIKNAGGISRGAGILLAIVVMFALIV 133 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG------GMWASELWTKHLSHPQSLKIL 136 + + EL + + VP L+ G S + + + Sbjct: 134 ALCNMMIPELYRSIRDMI---LTVPSQLNRFIGKMTEVMSTDQSTIGQMAEAVLKEASDA 190 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDY-------CLSIIFMIIALFFFYRDGFSISQQLD 189 +T+++T+ ++ + S + ++ + +I + LF + + + Sbjct: 191 LQTWMRTDLLNQVNVLMSNLTVGVINVVKELCYVLIGVIVSVYVLFSKEKFASQCKKLVY 250 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ ++ ++ +G I + G++ + +P + + VI Sbjct: 251 AIMRPSRANMVLHLTIKSNEIFGGFIIGKIIDSAIIGVLCFVGLSILDMPYTMLVSVIVG 310 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP P S L++ + ++ + + + P ++G L Sbjct: 311 VTNVIPFFGPYIGAIPSAVLILLSDPKMGIYFIIFVFLLQQLDGNIIGPKILGDSTGLSA 370 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G +G+ +G A+I I K + EN Sbjct: 371 FWVVFSILFGGGMFGFVGMILGVPTFAVIYYIVKMLVNHQLENH 414 >gi|218282483|ref|ZP_03488742.1| hypothetical protein EUBIFOR_01324 [Eubacterium biforme DSM 3989] gi|218216579|gb|EEC90117.1| hypothetical protein EUBIFOR_01324 [Eubacterium biforme DSM 3989] Length = 385 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 29/308 (9%), Positives = 93/308 (30%), Gaps = 13/308 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCLFIVPLLFLF 82 F A + S + I + V++ + V +F+ + + Sbjct: 42 LPFLLGAGLAFVFNIISNNLMRYSIKWFDIKDTKIKRIISNVLSVLIVFAVFVAFVGIVI 101 Query: 83 ----YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + + + + + + I + ++ ++ Sbjct: 102 PRILFSIQLLLTNFPQMIYELYIWLLDITKNIDVIHDSLKNLDINAFSTFAIDNVSKKIS 161 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 ++L + G + I + I+ F + + ++ SL + P Sbjct: 162 SWLVSGGANDIFGSIFTILSTTFSWFAQAFITIVFSFLLLFNKEQVVRETKSLLKAYLPE 221 Query: 199 ----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + +++ ++ S G + + ++ + + +P +G++ I A++ Sbjct: 222 KNYDRVRHVLKLIVRIFTSYVGGTCLECLILASLVTAGALILKIPYAFLVGLVVGIGALV 281 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + + + + + + + + P +VG + P + Sbjct: 282 PMFGALVAAILCAFFIAMTSPVQGLTFIIMFICIQQVEGNFIYPHVVGKSVGFPPMYIIV 341 Query: 315 GLVGGVRT 322 + G Sbjct: 342 AITIGANV 349 >gi|17229969|ref|NP_486517.1| hypothetical protein all2477 [Nostoc sp. PCC 7120] gi|17131569|dbj|BAB74176.1| all2477 [Nostoc sp. PCC 7120] Length = 387 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 124/340 (36%), Gaps = 15/340 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + ++ A ++ F +P+ S+++ + +A++ + + + + Sbjct: 36 ISAIFDYFHSLIVILVGASVLAFLLNYPV--SWMAHRGARREQVAILVFLLALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ + T L ++ Sbjct: 94 VTLFPLALTQAQQLVARIPELIDSGRSQLMMLNE--------KAETVGLPINLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I ++ L + ++ F+ + G + Q L F A Sbjct: 146 NDRVKGQLQAIAGQVLNLAVVTFTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPSKFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + R+ ++ F+ I++ L A+ VP + G+ IMA++P G Sbjct: 206 PFSQTVRL---SFQNFFITQLILSTCMASALIPAFLWLKVPFGLLFGLTIGIMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 S-VGIALTTSLVALQDFSMGVRVLIAAVIVQQILENLIAPRILGNFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G R GLLG+ + +I + N +++ Sbjct: 322 GARVGGLLGVIVAVPTAVIIKTALTALRPSSVNNAIEVTD 361 >gi|325661882|ref|ZP_08150503.1| hypothetical protein HMPREF0490_01241 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471860|gb|EGC75077.1| hypothetical protein HMPREF0490_01241 [Lachnospiraceae bacterium 4_1_37FAA] Length = 463 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 51/395 (12%), Positives = 127/395 (32%), Gaps = 40/395 (10%) Query: 2 RETMLNPQGIMRWMIMFIILVS-----LYFLK------------GFFAPVLSALIIGFTS 44 R T Q + R M F+++ + FL+ P++ ++ + Sbjct: 29 RTTSKLQQHLNRGMTAFLVVAASIVFYFAFLRFGHISGVLGKIFQILKPIIYGFVLAYLL 88 Query: 45 WPIY----SSFISKKEES-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 P+ + + + F + + + ++ L + E+ + Sbjct: 89 NPLMKMVENFIVKLLKGKIKKEERLKKFARGVGIFTALLFAGALIVALCNMILPELYRSI 148 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQSLKILSETFLKTNGIDFIPRF 152 +V + W+ + + + E +++++ + I + Sbjct: 149 RNMVYTVPEQL--NEWMERLSEMEFDDSTLALITKNVLTETTAFFENWIRSDLLRQINIW 206 Query: 153 ASRFGMI-------FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 S ++ + II + LF + + ++ + I+R Sbjct: 207 ISGLTEGVISVVNELMNIVIGIIVSVYVLFSKETFAGQSRKVVYAVLKPEKANLVLHITR 266 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 K+ +G I + G++ + +P + + VI + +IP G I Sbjct: 267 KSNKIFGGFIIGKIIDSAIIGVLCFIGLSILDMPYTLLVSVIVGVTNVIPFFGPYIGAIP 326 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +I LL+ + ++ + + P ++G L F ++ G G Sbjct: 327 SAILLLLT-DPIKGLYFLVFIIFLQQLDGNIIGPKILGDSTGLSAFWVVFSILLGGGLFG 385 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ +G A+I +++ I E K + + Sbjct: 386 FAGMIMGVPTFAVIYYLFQMFINQNLEKKHLPTDS 420 >gi|255101183|ref|ZP_05330160.1| hypothetical protein CdifQCD-6_10269 [Clostridium difficile QCD-63q42] gi|255307057|ref|ZP_05351228.1| hypothetical protein CdifA_10742 [Clostridium difficile ATCC 43255] Length = 361 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + ++ + L +L + F+ +F+ Sbjct: 102 NRLINEMPMYTDYIDSFIE--KNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFL 159 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 160 I-YTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + ++ + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESI 346 F+ + A++ + I Sbjct: 339 FLSVPIAAVVKTYVDKYI 356 >gi|255650553|ref|ZP_05397455.1| hypothetical protein CdifQCD_10251 [Clostridium difficile QCD-37x79] Length = 346 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 27 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 86 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + ++ + L +L + F+ +F+ Sbjct: 87 NRLINEMPMYTDYIDSFIE--KNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFL 144 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 145 I-YTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHD 203 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + ++ + + + L I + +IP P I Sbjct: 204 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 263 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 264 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 323 Query: 329 FIGPVLMALIAVIWKESI 346 F+ + A++ + I Sbjct: 324 FLSVPIAAVVKTYVDKYI 341 >gi|153953946|ref|YP_001394711.1| permease [Clostridium kluyveri DSM 555] gi|146346827|gb|EDK33363.1| Predicted permease [Clostridium kluyveri DSM 555] Length = 341 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 109/319 (34%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ +L + +I +T PI + K S A I V I L Sbjct: 30 VLREIIYLILISFLISYTLKPI-QKIMVNKGISEKISAFILIALVGLFIISIFAILIPSL 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E L + + + L I G L +++ T + T Sbjct: 89 FKESLSLNNAIYSIQNLVDNIYGKLKLIQGNRTIHVL----INNFNRKIDGEVTVMFTRI 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D + + L ++ + + ++F +G I++++ S K IS Sbjct: 145 FDSLMKMGQNI--------LYVVVIPVITYYFLSEGECINEKVLSTFPIKSRGIIKNISC 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 K++ + +++ G+V + V + L V+ A +IP PI Sbjct: 197 HADKILGRYIISQLMLSGFIGIVTFFILLILKVDFPIILSVLNAFFNIIPYFGPIFGAIP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + + A + + I L P + I + L L+ G G Sbjct: 257 AIAIALIESPEKAIWTAICLYVLQQIEGNILSPKVTADSISMHPLVVILLLIIGGEIAGF 316 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + L +I V++++ Sbjct: 317 IGMVLAVPLGVIIKVMYED 335 >gi|283769056|ref|ZP_06341962.1| putative membrane protein [Bulleidia extructa W1219] gi|283104413|gb|EFC05790.1| putative membrane protein [Bulleidia extructa W1219] Length = 365 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 76/207 (36%), Gaps = 1/207 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + ++ IF + F SI + + + E + P +++ + Sbjct: 158 VTSELPSVLNSTISMAITFIFSFVISVFMSFQWDSIKETVSNWSEKMSPK-GSEVTFAIA 216 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +++ + I+ + + + Y L G P L ++T + ++P P++ ++I Sbjct: 217 DEVQTYIHSLFILMVIKVIEYALVYSLLGHPDWFILCILTGLALLVPYIGPMAVYGLAIL 276 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I L + I + D + P + + L F ++ G G++G+ Sbjct: 277 TAVGMPIGRFGFLVVILLILSNVDDYVISPLVHARNTSITPLWVLFSIMVGNTLFGIIGV 336 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 I + I K ++ E+ Sbjct: 337 IIAIPVYLAIHKFLKLRKYRKDDSYEQ 363 >gi|299822402|ref|ZP_07054288.1| membrane protein [Listeria grayi DSM 20601] gi|299815931|gb|EFI83169.1| membrane protein [Listeria grayi DSM 20601] Length = 350 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 109/354 (30%), Gaps = 23/354 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + R + +++ LY L+ +L I F + + + + + Sbjct: 5 QKLFHNKSFQRVLTFILLIGILYLLRSELNLILLTFIFAFIATRLERLILRWVKIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWAS 120 VI + V + + + ++ ELV V H WL D Sbjct: 65 VVILYILVTLGIYAGITHVLPVLIKQISELVDLGVKLYHHPPQNGFTDWLLDTTKNSHIQ 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + G D I FG + + + L++I + R Sbjct: 125 SYLRQ-------------------GADLIMDSLKSFGALGMSFFLALILSLFFSLEKERV 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + Q + + +IA+ L+ A +L P Sbjct: 166 -AKFTAQFQTSKLSFLYDNLAYFGKKFVSTFGVVLEAQLVIAVINTLITSLALFLMDFPQ 224 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++L ++ + +IP I +++ G + + L + + I L P Sbjct: 225 MLSLVIMVFLFGLIPVAGVIISCIPLTVIAYTIGGVEDVIYLLITIVVVHCIETYFLNPR 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ LP TF L+ G+ GL IG + + I K+ Sbjct: 285 LMASKTSLPIFYTFIVLIFSESYFGVWGLIIGIPVFVFLLDILDVRNEEQKQKH 338 >gi|221213106|ref|ZP_03586082.1| integral membrane transport protein [Burkholderia multivorans CGD1] gi|221167319|gb|EED99789.1| integral membrane transport protein [Burkholderia multivorans CGD1] Length = 618 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 5/193 (2%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + A F + +I +I+ F + ++L L + Sbjct: 155 QLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHRTTTAMSDAARR 214 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + FL + + G VL + G+P + GVI +M +P G I+ +I L Sbjct: 215 LSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATI-L 273 Query: 270 LIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + + + + L P + G L + + G +G Sbjct: 274 AAAMSPGWSMIVTILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVG 333 Query: 328 LFIG-PVLMALIA 339 L + P+ + L+ Sbjct: 334 LVLSTPLTLCLVI 346 >gi|257880906|ref|ZP_05660559.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257816564|gb|EEV43892.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] Length = 359 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 119/356 (33%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 19 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 79 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVINFYEHQPKDAD-----PVLQYIHTY 133 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 134 IERNDFFEQL----------QNGASIALGYLQDIGKMAVAFAMSFILS----FFFMIEKK 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ I K + + ++A+ L+ A + G Sbjct: 180 KTIVFSRLFLKSEFSWFFQDIYYFADKFVNTFGLVLEAQFVVALLNTLLTTIALAVFGFH 239 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + I I L P Sbjct: 240 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ +LP TF L+ R G+ GL +G + + K + KE Sbjct: 300 KLMSSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHLPKE 355 >gi|119503091|ref|ZP_01625176.1| succinyl-diaminopimelate desuccinylase [marine gamma proteobacterium HTCC2080] gi|119461437|gb|EAW42527.1| succinyl-diaminopimelate desuccinylase [marine gamma proteobacterium HTCC2080] Length = 354 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 118/353 (33%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + ++ +I+ L+ L + F P+ A+++ + + + K S+ Sbjct: 10 DRYLSEEESVLLLVILVGSLILLAAVGHIFTPIFVAVVLAYLMQGVANQLY-KWGLSTRI 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 IAT+ F +L L ++ L + + G L + + + E Sbjct: 69 GVWIATLMFTSAFFAFVLGLLPLVWRQLVSLAREAPAMVERGRAALSVLPEKYPAIISQE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ Q L T G IP L + ++ + +FFF +D Sbjct: 129 QINLAMNSVQGDMAGLGQLLVTKGFSSIP--------GLLAVLVYMVLTPLMVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I SL P +I + + G I I G V A+ G+ Sbjct: 181 DQILDWFTSLLPTERPML-SRIWSEMNIQFANYVRGKVIEIILVGGVSYIAFAFLGLNYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPF 299 L ++ + +IP GA + V + I + L + ++D L P Sbjct: 240 ALLALLVGLSVIIPYIGATLVTIPVVAVAFFQWGIGPSFYWALGAYGVIQLLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G+ G+F L L++ I A E Sbjct: 300 LFSEAVNLHPVAIIIAVLFFGGVWGVWGVFFAIPLATLVSAIVSAWPTAGNEQ 352 >gi|302381466|ref|YP_003817289.1| hypothetical protein Bresu_0351 [Brevundimonas subvibrioides ATCC 15264] gi|302192094|gb|ADK99665.1| protein of unknown function UPF0118 [Brevundimonas subvibrioides ATCC 15264] Length = 380 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 97/337 (28%), Gaps = 25/337 (7%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + +LY+L+ P+ A+ + + + + + A + V Sbjct: 19 TLAVVAVGAALYWLRDILTPLAMAIFLMIMIDGVKRFIEDRTSLPDHWAGIAALLLVTVA 78 Query: 74 FIVPLLFLFYYGM---LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 F+ + F+ + + S + I L + A EL Sbjct: 79 FVGAIAFIVNGAAGFFSDASGVSSGIGPRIDAIIADGAKLFGVTTPPTAQELIGSIDLRG 138 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + +G S ++ F + + Sbjct: 139 YLIGLAGQAQGVASG--------------------SFFVLVYLGFLLASQVGFRRKIIAM 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 E ++ + V + T+ + G+ + + Sbjct: 179 FPEREQRNEALEVFQRVRGGVEGYLWVQTVTGAIICAAAWILMRVVGLEHAEFWTFVIFV 238 Query: 251 MAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP GGA L+ + A L + + LF+V ++P + G + Sbjct: 239 VGFIPVLGGAVAGLAPPLFALVQFPTYWPALILLVGLQVILFVVGNMIQPRMQGENQNID 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + G++G+F+ L + I E Sbjct: 299 PVAVLLALALWGKMWGVVGMFLSTPLAVMAMAILAEF 335 >gi|57238926|ref|YP_180062.1| hypothetical protein Erum1930 [Ehrlichia ruminantium str. Welgevonden] gi|58578859|ref|YP_197071.1| hypothetical protein ERWE_CDS_01950 [Ehrlichia ruminantium str. Welgevonden] gi|57161005|emb|CAH57911.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58417485|emb|CAI26689.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 373 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 125/360 (34%), Gaps = 12/360 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + +IL++ + ++ P +A+II + P+ + + + +I Sbjct: 8 LVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQLSVLII 67 Query: 66 ATVSVMCLFIVP----------LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 ++ + LL L + + ++ + + + + + I Sbjct: 68 LISALYIIIAFLIIFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEIIKA 127 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L++ + + ID I A + +I+ +I LF Sbjct: 128 IKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTIFLGAINSSINIGYIVSTILITLILLF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + SI + L + + + +I + G + + + + Sbjct: 188 YILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIYYTICLCI 247 Query: 236 AGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + + +G+I+ +M IP P+ + + I +L N + I + Sbjct: 248 INLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLVES 307 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P L+G I + + G++ +G +G+ + + A++ V K I +K Sbjct: 308 NVITPLLIGKRIDIHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMNSK 367 >gi|296186799|ref|ZP_06855200.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] gi|296048513|gb|EFG87946.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] Length = 351 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 116/327 (35%), Gaps = 5/327 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ ++I I+ ++ + + P + AL+ + + S+ ++I T Sbjct: 9 DKIVIFFIIYTIVFLTFFSTINYTLPFVLALLFALILKKPTKYIMRTFKIRSSIASLITT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDI-PGGMWASELWTK 125 ++ + ++ L F E +L + L +++ V ++ Sbjct: 69 ITFFTILVLILSFGIGMFTSEAIQLGKNIQLYISKNSSNVYDSFEELQKYYKNLDPNIIN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S + + + I F + I+F ++A +FF +D + Sbjct: 129 AVDKNFSSLVTKLSNITVFITGKIVSTLLGFLASIPYIIMVILFTLLATYFFTKDIVDVK 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ I K++ + + +I L + V + L Sbjct: 189 DKFLNIIPENKTDKIFYIYLETKKMLVNYIMSYMLIIGITFLETIIVFLFFKVKYAIVLS 248 Query: 246 VITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ A + ++P G I IY+ + N A + + I + I+ + + P +V Sbjct: 249 VLCAFVDILPILGIGTIYIPLAIIYIFLFKNYITAFGIII-SYILVSIIRQIIEPKIVSS 307 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + L G++ G+ G+ Sbjct: 308 SLGINPVAVLAALFIGLKLNGISGIIF 334 >gi|320009827|gb|ADW04677.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 358 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 114/333 (34%), Gaps = 22/333 (6%) Query: 14 WMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + V+++ LK PVL AL+ P+ + + + A + ++ Sbjct: 23 LLVAGVGAVAVWLSVTLKTAVTPVLLALLGTALLGPVQRWLTAH-GVNRSVAAGLTCAAL 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + ++V + A Q W+ + +++ Sbjct: 82 VAVVGGAGYIVVTALVDSGDQIVQSLKDAAQ-------WV--------IDHFDIEGVANV 126 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L ++ ++ G S + + + ++ FFF RD + S Sbjct: 127 DDLADNAKGLVEKFGASAAGGLLSGI-SLIGSLVTTSVLALLLTFFFLRDSDRAAHLAHS 185 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + + G T IA+ + L + + VP LG + + Sbjct: 186 VAPRGTGDLVEAMGRRAFEAVEGFMRGTTFIALIDALCITVGLLILRVPGAAGLGALVFV 245 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP GA IS + L I A + + L+P + +++ Sbjct: 246 GAYIPYLGAFISGAVAVLVALADRGIVIALWVLGVVVAVQVLEGHVLQPVIQSRTVQMHP 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L G GLLG+ + P+ A + VI Sbjct: 306 AMIMIALTAGASVAGLLGMLLAVPLCAAAVGVI 338 >gi|83815005|ref|YP_445462.1| transporter, putative [Salinibacter ruber DSM 13855] gi|83756399|gb|ABC44512.1| transporter, putative [Salinibacter ruber DSM 13855] Length = 442 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 122/323 (37%), Gaps = 13/323 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + ++ + P+ + + +++ T V+ +F++ +L L + + Sbjct: 119 LVPFAAVYLLAYLLNPLVERLRERYQVPRWLPSLVVTSLVVGVFVLFILILAPNIANQAQ 178 Query: 91 ELVSKVVLANQHG---IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 L +V+ Q + L + G + + ++ Q+L L + + Sbjct: 179 ALSDRVLGTVQTLRAWLEASTVLDALEGAGLLQK--QEVIAQLQALIKEQAGRLPSAAEN 236 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + S G++ L + + + LF+ +D ++ L L Sbjct: 237 LVASLGSFLGVVTL-----LALVPVILFYTLKDYPTVQSGLVDLFPTAGGRR--DYLVEA 289 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 ++ F G +I+I + + +L +P + +G++ ++ +IP GA I+ + Sbjct: 290 GSIVGRYFRGQLLISIIATINVSVLLFLFDIPFWLLIGLLAGLLNLIPQIGALITMVVGA 349 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + LI G+ A + E + L P ++ + L L F L+ +G+ Sbjct: 350 LVALILGSWVKAVIVIAVLLGESLLEQSVLTPNILSYQVGLHPLLVLFSLLVFGTLLGVF 409 Query: 327 GLFIGPVLMALIAVIWKESIMAI 349 GL I + A++ ++ + Sbjct: 410 GLLIAVPMTAILMTGYRAFREEL 432 >gi|148262712|ref|YP_001229418.1| hypothetical protein Gura_0633 [Geobacter uraniireducens Rf4] gi|146396212|gb|ABQ24845.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 348 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/337 (10%), Positives = 107/337 (31%), Gaps = 11/337 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + I+ +++ + Y L+ + L + ++ + P KK Sbjct: 8 SNRAIIGLLVIAAFFAAGYALRHTVSCFLLSFVLAYLIDPCVVYLERKKTPR-------- 59 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + + + + + + + +P W + + Sbjct: 60 -LYGILIVYLVIGLVSVFCIAYLLPFTTLAWDSLVRDLPRHVQKGKEIMLGWKDQFQPAY 118 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + + +II I +FF +I Sbjct: 119 GADEWQWLFDTLSTNMNKLFAKMSAGVYAAAANVVFNLFNIILSPILVFFMLYYKRNIID 178 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ + + + R + + + G ++++ ++ A + G+ V G+ Sbjct: 179 EIVAWLPAAHSDNIRALGREINQSVGGYIRGQMVVSLIVAVLSTIALFYLGIDYAVLNGI 238 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGP 304 + +++P G ++ + +K L + F+ ++P + Sbjct: 239 FAGLASILPFIGVVLATIPPLFFAYVKFQSGVVLIKVLASFAAIYFLEGYVIKPLVFKES 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L T ++ MG G+ + L A +I Sbjct: 299 MDLNPLFTIIIVMAFGELMGFWGILLAIPLAAAFKII 335 >gi|282881880|ref|ZP_06290531.1| putative permease [Peptoniphilus lacrimalis 315-B] gi|281298289|gb|EFA90734.1| putative permease [Peptoniphilus lacrimalis 315-B] Length = 415 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 125/362 (34%), Gaps = 18/362 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE------ESS 59 LN +GI + + + + F + A +I +K + Sbjct: 51 LNQKGISKIFVTLLS-----IMFPFILGGVLAFMIKIVLNFFEEKLFNKIKSARFQKHKR 105 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ + + + L + + + +L + + Q I R ++ I Sbjct: 106 KISILVSIFVIFLIIFIILRIVVPQFISSISKLQTALPPLIQKAIDKSRNIAFIDEYSDK 165 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFF 176 + HLS + + E I + A L ++ + +I + Sbjct: 166 MQKIYDHLSVSKIFDQIREFVKNQGDNSSISTAFQRAYSTATNILGGIVNFVLALITAIY 225 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 D + Q + +F + +++ + G I + G+++ Sbjct: 226 ILSDKEHLEYQSKRIVYSIFSQKTSGKIFHVFKLLHQNFERFIRGQIIDSTVLGIIVFIF 285 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +LA +P+ LGV+ + ++P P + L++ + A ++ I + Sbjct: 286 SFLAKMPNATTLGVLAGVTNLVPIIGPFIGGFMGFVLIVIDDFSKAIIFVIFIFIMQQVE 345 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P LVGG + LP L T + G G++G+++ L + I + E + Sbjct: 346 SNLIYPKLVGGAVGLPALWTLIAITVGGSLFGVVGMWVFIPLTSTIYTLIGEYTKYKIDK 405 Query: 353 KE 354 K+ Sbjct: 406 KD 407 >gi|271968820|ref|YP_003343016.1| hypothetical protein Sros_7599 [Streptosporangium roseum DSM 43021] gi|270511995|gb|ACZ90273.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 355 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 2/200 (1%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L ++ +L G + I A + ++ +I +F G + + L Sbjct: 133 ELFEQAKQYLSGRGGE-IASGALAGVRTVGEILFGVVLAMILSVYFVHSGDRLVGWVIDL 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ ++ V+ G+ ++ + +G +G A W+ GVP + L V+T Sbjct: 192 APRGARRTLRESGAVIFDVVSRYIRGVALVGLVDGFFIGIALWILGVPIALPLAVLTFAG 251 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A +P GA + ++ + A + + + L P + G + LP Sbjct: 252 AFLPVVGAFAAGLLAAVVAFVAKGWLVALIVVAVTVLVQQLEGHVLAPQIYGRALDLPSA 311 Query: 311 PTFFGLVGGVRTMGLLGLFI 330 + G G++G F+ Sbjct: 312 AILIIIALGSVLGGIVGAFL 331 >gi|209965064|ref|YP_002297979.1| hypothetical protein RC1_1769 [Rhodospirillum centenum SW] gi|209958530|gb|ACI99166.1| membrane protein, putative [Rhodospirillum centenum SW] Length = 370 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 88/249 (35%), Gaps = 12/249 (4%) Query: 105 PVPRWLSDIPG---------GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 P W+ +P G +++ L+ + ++ + P A+ Sbjct: 106 PATAWVRRLPVILSEVREKFGDIQAQIEQARLATERLQQMTGAGDAPPEVVVRGPSLAAE 165 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP-AYWKKISRIVPKVIRST 214 + FFF G + + H+ + I V I + Sbjct: 166 ILSQTQIVMAQAAVTLALTFFFLAFGRHTLESVLRSLPHVRDRLHLVDIVNTVQINISAY 225 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKG 273 + +T+I V + W G+P+ V G I ++ IP G+ + ++I L+ Sbjct: 226 LMTITLINSALAFVTATLLWALGMPNPVLFGGIAGLLNFIPYIGSACTTIILAIVALLSF 285 Query: 274 NIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + A L I L ++ + P +VG + L + F ++ G+ G + Sbjct: 286 DTWWAVLLPPACFIMLTALEGNFVTPTIVGRRLTLNPIFVFATVLFWGWLWGMPGALLAV 345 Query: 333 VLMALIAVI 341 ++A+ ++ Sbjct: 346 PILAVFKIL 354 >gi|327537466|gb|EGF24190.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 435 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 106/338 (31%), Gaps = 13/338 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + + L LY P+ A + + PI + A Sbjct: 68 RGMVTAIAAILTLGMLYIASDLLVPIAIAALAYLSLRPIEAKICR--WGVPQAAASAM-- 123 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + L L + A + + + + A + + Sbjct: 124 ----LIVGLFSSLALIIALLYSPAQQWLTSAPESLAAIRSKFQSVAEPLTAVDRAGTAVD 179 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E ++ + + + + FF G + + Sbjct: 180 DATIPLKEDEPRIEVAYQKPSIVDETVLINQTGQMLAFVAAIAVLTFFMLSTGDDLLNRT 239 Query: 189 DSLGE--HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + KKI + + + +T I IG G+ + WL G+P+ V GV Sbjct: 240 LGVLPNSRSRGEVLKKIGD-IQQSVGRYLAQITCINIGLGVAVTFVMWLVGMPTPVLWGV 298 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDK-TLRPFLVGGP 304 + A+ IP P++ T++ + + CL + V+ + P ++G Sbjct: 299 MAALFNFIPYVGPLAATSIVFLAAASSFDTMSRACLTAFAFWLTTAVEGQFVTPTILGKT 358 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +K+ + + GL G+F+ L+ + I+ Sbjct: 359 LKVGPVVVLIAVAFWGFLWGLSGVFLAVPLLIVQRKIF 396 >gi|313633275|gb|EFS00138.1| membrane protein YdbI [Listeria seeligeri FSL N1-067] gi|313637865|gb|EFS03195.1| membrane protein YdbI [Listeria seeligeri FSL S4-171] Length = 345 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 115/358 (32%), Gaps = 26/358 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R+ + ++ LY L+ +L I + + + + + + ++ Sbjct: 8 LQNKSVKRFGVFLLLAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + ++ + ++ +LV+ Sbjct: 68 LYVVIATVIVLVFVKYIPVLGDQVNQLVNFANKFFTT---------------------DS 106 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L+ F + + +++ ++ FF + Sbjct: 107 NNDFINYIINLANQFDIMKYTEQGVTMLLTYLTNVGTVLMNVFIALMLSLFFSLGKDHLV 166 Query: 186 QQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ IIA+ ++ A W+ G P + Sbjct: 167 SFTNQFSTSKIGFIYEEAKFFGSKFVGTFGKVIEAQFIIALVNAVLTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILIVVMIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G+ GL +G PV+M + V+ I++ IS Sbjct: 287 SAXXXLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTGQEEIEQPNNTISH 344 >gi|296332814|ref|ZP_06875274.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673160|ref|YP_003864832.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296150094|gb|EFG90983.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411404|gb|ADM36523.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 350 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 111/354 (31%), Gaps = 21/354 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ I ++ LY K +L I F + + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFLSRFFRVSQRVVITF 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L V L + + + ++V +H P IP + ++ Sbjct: 72 LYMLLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPD---TIPFFDEITSVFGDINIS 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 G + + + + + L I+ +I FF + +++ + Sbjct: 129 SYV----------KEGFNVVYTYLADIST----FGLQIVMALILSMFFLFEKKRLTEFMA 174 Query: 190 SLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++++IS + IIA+ ++ A W+ P L + Sbjct: 175 KFKTSKLRVFYEEISFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLSI 234 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + +IP G IS +SI G + L I L P L+ Sbjct: 235 MVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKT 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + SN Sbjct: 295 ELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEEGPKRFQEKSN 348 >gi|170690474|ref|ZP_02881641.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144909|gb|EDT13070.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 651 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 7/169 (4%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + I +++ +F + + + G I+ ++ R F+ + + Sbjct: 193 TFIVLVVTIFILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSR-YFVAQLGVNLSA 251 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G V+ + GVP + GVI A++ +P + A + + + I + ++ Sbjct: 252 GGVIAIGLAIIGVPGALLFGVIAALLRFVPYIG--IWIAAILAVFLAAAIQPQWTMAVYT 309 Query: 286 AIELFIVD----KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I +VD + P L G L L + G +GL + Sbjct: 310 LILFIVVDVVAGQIAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVL 358 >gi|266619979|ref|ZP_06112914.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288868443|gb|EFD00742.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 362 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 111/342 (32%), Gaps = 14/342 (4%) Query: 13 RWMIMFIILVSLYFLKGF---------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 R I+ S+ FL F +P ++A +I + K + A Sbjct: 7 RAFIIHFAYFSILFLMAFTVLKYGLSMLSPFVAAFLIAWVLKGPIGFVSGKLRLNWKPAA 66 Query: 64 VIATVSV---MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I L E+ + + + + S Sbjct: 67 ILVVLLFYSTIGFLIFLLGVKALSAAKELTANLPGIYAYYVEPALISLFDSFEQSIFRVD 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + S + + S + I+ MII+ FF D Sbjct: 127 NTLLAAFMELETQFVQSAGQMVSGLSMDAMGHISGIASSLPGLFIEILLMIISTFFIALD 186 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + + +I V + +I + L + GV + Sbjct: 187 YHRLTGFCLMQLDGKAKDVFFQIKEYVVGTLLVCIRSYALIMTITFVELAVGLSVIGVKN 246 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V + + A+ ++P G +I ++G+ L + + +V L P Sbjct: 247 SVLIAFLIALFDILPVLGTGGIMIPWTILTALQGDY-PLALGLLLVYLFVTVVRNILEPK 305 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +VG I + + T G+ G + G+LGLF P+ ++L+ + Sbjct: 306 IVGSQIGVHPVVTLAGMFVGAQLFGVLGLFGFPIGISLLRHL 347 >gi|170078569|ref|YP_001735207.1| hypothetical protein SYNPCC7002_A1964 [Synechococcus sp. PCC 7002] gi|169886238|gb|ACA99951.1| Protein of unknown function PF01594 [Synechococcus sp. PCC 7002] Length = 373 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 119/322 (36%), Gaps = 8/322 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ A++I T P+ + + + ++ + +L + + +++ Sbjct: 33 LVVLMIAVVIAATLAPV-ITIAESFRVPRWLAVIGVYLGLISILTGVVLLIGPTVVDQIQ 91 Query: 91 ELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +L+ K+ L + G+ V W + L Q+L + + Sbjct: 92 KLIRKLPLYLEIVGVLVQSWAVRLGMTEPQVLEQLNRLFDLQALTAWA-----FRSSQEL 146 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + LS+I + + + + SL + + + + + Sbjct: 147 LIRSYGITRGVIGGILSLILAFMLSGYMLSGSDKLIKGFVSLFPAPWDEQLLEQVQPMSE 206 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + S G +++ G+V+ L G+ + LGVI A+ +IP P+ ++ Sbjct: 207 RMGSYIQGRIVVSGILGIVITIGLRLLGISELALGLGVIAAVTNLIPFFGPVLGAVPALI 266 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + L + + L P LVG +K+ L ++GG + +G+LG Sbjct: 267 VAIAQGGWTFLSVLLLFTLIQNLETYVLDPLLVGSSVKVNPLYQLLAVLGGAQVLGILGA 326 Query: 329 FIGPVLMALIAVIWKESIMAIK 350 I P +A AV+ + K Sbjct: 327 VIVPPWVAGAAVLLDNLYLKTK 348 >gi|325281691|ref|YP_004254233.1| hypothetical protein Odosp_3090 [Odoribacter splanchnicus DSM 20712] gi|324313500|gb|ADY34053.1| protein of unknown function UPF0118 [Odoribacter splanchnicus DSM 20712] Length = 368 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 128/361 (35%), Gaps = 24/361 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAP----VLSALIIGFTSWPIYSSFIS-KKEESS---T 60 + ++++ + L F +F +L A +I F PI K Sbjct: 2 NSVTKYVLGIVALAGAIFFSWYFFSVIVYILVAAVISFIGRPIIDLLGRVKIRGYRLPDG 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A I + + LFI+ + + E + L + V + +P I Sbjct: 62 LKAGITVICLWGLFILFFSTIIPLAIREFQSLGNVSVSNIVSELEIP-----IEDAGHFM 116 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + +++ K + + + D +++ + LFFF +D Sbjct: 117 KHYGLMDEDQDVDAYVTDLLSKVFNVGQLKTWFGTVAGTMTDIFVALFSITFILFFFLKD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL--AGV 238 S + ++ F + + K++ F+G+ + +G + + G Sbjct: 177 SRLFSGMVMAVLPSRFEEQARNALDSIQKLLVRYFVGLLLEVLGVMALNTIGLTIVGLGF 236 Query: 239 PSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIK------GNIFNATCLFLWGAIELF 290 + V +G++T ++ +IP P+ F +++ +++ + + Sbjct: 237 SNAVVIGLVTGVLNVIPYIGPMIGVFFGLAVGVVLNLGLDFYDQMLPLLIYMTIAMLLTQ 296 Query: 291 IVDKTL-RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++D + +PF+ G + L F ++ G+LG+ + ++ V+ KE Sbjct: 297 LIDNVVFQPFIYGSSVHAHPLEIFLVILMAGSMAGILGMILAIPSYTVLRVVLKEFFNKY 356 Query: 350 K 350 K Sbjct: 357 K 357 >gi|126699668|ref|YP_001088565.1| hypothetical protein CD2051 [Clostridium difficile 630] gi|115251105|emb|CAJ68936.1| putative membrane protein [Clostridium difficile] Length = 361 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + ++ + L +L + F+ +F+ Sbjct: 102 NRLINEMPMYTDYIDSFIE--KNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFL 159 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 160 I-YTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARSKADNIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + ++ + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESI 346 F+ + A++ + I Sbjct: 339 FLSVPIAAVVKTYVDKYI 356 >gi|291166115|gb|EFE28161.1| membrane protein [Filifactor alocis ATCC 35896] Length = 365 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 29/353 (8%) Query: 14 WMIMFIILVSLYFLK-------------GFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 I ++LV ++ G P A I F P+ K++ + Sbjct: 12 IFIATVLLVIYQIIQNYEWFFSFAYRVLGILVPFFWAFGIAFLLNPLMVYIEKKRKFNR- 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I T+ + F++ L ++ +LV + ++ + + + S Sbjct: 71 ----IVTLLFIYTFLI--GVLTLLVVIVTPQLVKSITDIIKNMPDYYDIVENKISVLLDS 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFF 177 + + ++ S L + D+ S + L I +I + Sbjct: 125 KFFEN--PELNTMVKDSVDTLAKSTFDYFNDSLSDIFSRLIGLTSGFLQFIVGLIVSIYM 182 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 D + LF A + V + F+G ++ + GL+ + Sbjct: 183 LYDKEYFKLSSKKIVYRLFGAQKGDFIIHWGNVTNTVFQEFFIGKSLDSFIIGLLCWAGL 242 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 P L +I I MIP P ++L A ++ I Sbjct: 243 LFLNAPYPFLLAIIVGIFNMIPYVGPFIGAIPVVFLSFFVKPITALWAAIFILILQQFDG 302 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L P ++G + + + + G G+LG+ +G + L+++I + + Sbjct: 303 NVLGPKILGNRMGIKPISVMLAIFIGGGLFGILGMLVGVPIFKLLSIIIDQFV 355 >gi|239993472|ref|ZP_04713996.1| hypothetical protein AmacA2_03147 [Alteromonas macleodii ATCC 27126] Length = 346 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 108/315 (34%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + P ++ I PI + K +L++ + ++ +F Sbjct: 19 LVVVMAGIKAASTIMVPFFLSIFIAIACSPIIRW--TSKFGVPKWLSITFVILLIVVFGF 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L M E +E + + W ++ I Sbjct: 77 LLAGLVGQSMTEFRENLPEYRSKLDTEFA-----------------WVVSKLAEFNIHIN 119 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E A+ F ++ +++ + F + SI ++L Sbjct: 120 RELIASHLDPATAMSVATNFISGMGGVLSNLFLILLTVIFMLFEADSIPRRLHIAL--AD 177 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P K + + S T++++G GL++G ++ GV + V+ ++ IP Sbjct: 178 PGMKLKHIDRFIRSVNSYLAIKTVVSLGTGLIIGIWLYVMGVDHFMLWAVLAFMLNFIPN 237 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + ++ +A L + I+ + P L+G + L L F Sbjct: 238 IGSIIAAVPAVLIAFVQLGPASAGFAALGFVLVNTIMGNMVEPRLMGKGMGLSTLVVFLS 297 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 298 LIFWGWLLGTVGMLL 312 >gi|223984398|ref|ZP_03634537.1| hypothetical protein HOLDEFILI_01831 [Holdemania filiformis DSM 12042] gi|223963640|gb|EEF68013.1| hypothetical protein HOLDEFILI_01831 [Holdemania filiformis DSM 12042] Length = 369 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 112/323 (34%), Gaps = 14/323 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L L+ P L I + P + F+ KK S + + ++ L I L+ Sbjct: 41 MSWLTTLRLILTPFLVGFGIAYVVHP-FIEFLQKKGVSRRIAIPLVCLGMLTLLIGILMM 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + EL++ ++ +++ + + ++ + + K F Sbjct: 100 VVPMVYDKTTELINSMISGLNWLYQQYVEMNENAPNILVAGIFQQITTLLNDTKSWLPNF 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +P+ S+ + + I + LF F I + + SL Sbjct: 160 -----SALLPQLISKVLSFLTNAVFAFIISVYVLFDF----EKIRKTIFSLA-RTIDKEL 209 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V I + ++ + L Y L G S + + ++T+I ++P Sbjct: 210 PIYLSAVNAEISGYLHSLLMLMAIKFLEYSLLYMLIGHKSAITIALLTSIGLIVPYFGAT 269 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGG 319 + I + + G L +VD + P + ++P L T + G Sbjct: 270 VANFIGILTSLT-LPLPKVLFLIGGICVLSMVDAYIIAPIVHSRSSQVPPLWTLLCVFAG 328 Query: 320 VRTMGLLGLFIG-PVLMALIAVI 341 +G +G+ I PV M+L ++ Sbjct: 329 GMLLGPIGIMISIPVFMSLRVIV 351 >gi|58616916|ref|YP_196115.1| hypothetical protein ERGA_CDS_01890 [Ehrlichia ruminantium str. Gardel] gi|58416528|emb|CAI27641.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 373 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 125/360 (34%), Gaps = 12/360 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + +IL++ + ++ P +A+II + P+ + + + +I Sbjct: 8 LVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQLSVLII 67 Query: 66 ATVSVMCLFIVP----------LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 ++ + LL L + + ++ + + + + + I Sbjct: 68 LISALYIIIAFLIIFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEIIKA 127 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L++ + + ID I A + +I+ +I LF Sbjct: 128 IKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTIFLGAINSSINIGYTVSTILITLILLF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + SI + L + + + +I + G + + + + Sbjct: 188 YILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIYYTICLCI 247 Query: 236 AGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + + +G+I+ +M IP P+ + + I +L N + I + Sbjct: 248 INLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLVES 307 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P L+G I + + G++ +G +G+ + + A++ V K I +K Sbjct: 308 NVITPLLIGKRIDIHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMNSK 367 >gi|293401382|ref|ZP_06645525.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305020|gb|EFE46266.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 405 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 16/235 (6%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W K +S+ + S + + ++ +FI FA F + Sbjct: 162 WEKIVSNAIAFLSGSASGILSSASNFISSFAVGFTGFMFSL------------YLLSGKE 209 Query: 183 SISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + +QL + + + V ++ S G A ++ L Sbjct: 210 NFIRQLRKVTAAFCGYDASLIVFQYASRVNRIFSSFIGGQLTEACILWVLYYVCMRLFQF 269 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + A+ +++P + +V +++ + + ++ + + D + P Sbjct: 270 PYPELICTLIAVCSLVPVFGSMFAMSVGAIMMLSHDPLQSIWFIVFYQVISYFEDNVIYP 329 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +VG + LP L + G+ G+ + A + V + E I K Sbjct: 330 RVVGNSVGLPGLWVLLSIFVFGDLWGVFGMVMAVPTTACLYVFFAEFINNRLRKK 384 >gi|325108379|ref|YP_004269447.1| hypothetical protein Plabr_1815 [Planctomyces brasiliensis DSM 5305] gi|324968647|gb|ADY59425.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 405 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 103/316 (32%), Gaps = 16/316 (5%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+ A+++ P+ SF K + VM + ++ ++ Sbjct: 78 MPLTMAVLLYLVLRPVMKSFA--KWHVPAVAGATICLVVMSAIV---FGAIFFLTQPTRQ 132 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V+ L + + +++ + ++ +P Sbjct: 133 WVNDAPGYMYQLKLKLSGLEEQLENVEEVSDKISDVTNGNDADEIKPMPVEIKQPRLLPG 192 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH-LFPAYWKKISRIVPKV 210 + ++ LFF G + + L + + + Sbjct: 193 L--NLLSSTGGFAAGLVITFGTLFFLLAYGDEMIENLIAGFRTGESRKRAHMLIFDLQHG 250 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-----GAPISFTAV 265 + S L +T+I G+ G+A WL G+P+ + +G + + IP G I F Sbjct: 251 MSSYLLTITVINALLGVATGTAMWLLGMPNPLLIGTMAFLFNYIPFLGAWVGTGIVFVVA 310 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + A + + + + + P ++G + + L F L G+ Sbjct: 311 VLQF---DSFAYALLVPVTYFTLTSLEGQFITPCILGRSMSMNPLLVFLFLAVWGWIWGI 367 Query: 326 LGLFIGPVLMALIAVI 341 G+F+ L+A++ ++ Sbjct: 368 GGVFLAVPLLAVLKIV 383 >gi|119487278|ref|ZP_01621029.1| hypothetical protein L8106_21177 [Lyngbya sp. PCC 8106] gi|119455833|gb|EAW36968.1| hypothetical protein L8106_21177 [Lyngbya sp. PCC 8106] Length = 321 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 106/329 (32%), Gaps = 11/329 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ +A+I+ I + K+ I+ + + + + Sbjct: 2 WKIRQVLLLAFTAIILATAINRI-VKLLQKQGMKRGVAVGISVFFLFLVLAGFVSIIVPP 60 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + +EL+++V + + L D+ +L P+ L Sbjct: 61 VIDQWQELITQVPMGFEQLKTWYLGLQDLIPSRIFG-----NLQSPERLLEQIPDPGFGL 115 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F++ G+ L+++ +I D + + + +I Sbjct: 116 FNNVFSLFSTSLGI-----TLNVVLVIAVTIMLLSDPTPYRRNFILIFPAFYRPRVNEIL 170 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + +G+ L+ G W+ G+ + ++ + IP P Sbjct: 171 NECEQNVVGALVGLLFNMTVITLLSGIGLWILGIRLALVNALLAGFLTFIPNIGPTISVI 230 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L + + A + I L P ++ + L T V G Sbjct: 231 PPALLALMDAPWKALAVIGLYIAIQQIESNILTPLVMKHEVSLLPAITLLSQVIFTIFFG 290 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 LGL + L+A++ V ++E ++ N+ Sbjct: 291 TLGLLLAIPLVAVLQVWFREMLVKDVMNQ 319 >gi|307265212|ref|ZP_07546771.1| protein of unknown function UPF0118 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919834|gb|EFN50049.1| protein of unknown function UPF0118 [Thermoanaerobacter wiegelii Rt8.B1] Length = 256 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 68/175 (38%) Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F+ +D ++++ + + + + + + K++ ++I + Sbjct: 81 TFYLLKDKNVFEKEIERMIPSKYHDSFFALLKKIDKILSKYIRAQIYLSIFVAIFTSIGL 140 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L V +G++ I+ +IP PI ++ + + ++ L + I + Sbjct: 141 SLIKVKYAFLIGILAGILNIIPYIGPILSIIPAVLIGLLDSLSKGFWALLVCLLVQQIEN 200 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P ++ + L + F L+ G G+ GL + ++A+ VI E + Sbjct: 201 AFITPKIISDSVGLHPITVIFSLIAGEELFGVWGLLLSVPVVAIGKVIVTEIFIE 255 >gi|255527660|ref|ZP_05394519.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] gi|255508640|gb|EET85021.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] Length = 349 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 116/327 (35%), Gaps = 5/327 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ ++I I+ ++ + + P + AL+ + + S+ ++I T Sbjct: 9 DKIVIFFIIYTIVFLTFFSTINYTLPFVLALLFALILKKPTKYIMRTFKIRSSIASLITT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDI-PGGMWASELWTK 125 ++ + ++ L F E +L + L +++ V ++ Sbjct: 69 ITFFTILVLILSFGIGMFTSEAIQLGKNIQLYISKNSSNVYDSFEELQKYYKNLDPNIIN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S + + + I F + I+F ++A +FF +D + Sbjct: 129 AVDKNFSSLVTKLSNITVFITGKIVSTLLGFLASIPYIIMVILFTLLATYFFTKDIVDVK 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ I K++ + + +I L + V + L Sbjct: 189 DKFLNIIPENKTDKIFYIYLETKKMLVNYIMSYMLIIGITFLETIIVFLFFKVKYAIVLS 248 Query: 246 VITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ A + ++P G I IY+ + N A + + I + I+ + + P +V Sbjct: 249 VLCAFVDILPILGIGTIYIPLAIIYIFLFKNYITAFGIII-SYILVSIIRQIIEPKIVSS 307 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + L G++ G+ G+ Sbjct: 308 SLGINPVAVLAALFIGLKLNGISGIIF 334 >gi|91086043|ref|XP_973506.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270010191|gb|EFA06639.1| hypothetical protein TcasGA2_TC009562 [Tribolium castaneum] Length = 903 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 7/206 (3%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G L++ L+ I + LF+ + + ++ + + F ++ + I F Sbjct: 696 GTAVLNFILNGIVFLTTLFYLLSSSGDLYKPVELMTK--FSTSGRRFGHALEGAINGVFT 753 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNI 275 +A G+ + L GV I+ +P G + + L + + Sbjct: 754 ASFKMAAFYGMWTWFIHNLFGVKIVYLPSAFATILGAVPFLGTYWACFPAVLDLWLAQDR 813 Query: 276 -FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 A ++ + IVD T+ + GG T + GG+ +G+ G +GP+L Sbjct: 814 GIEAIVFAIFQFLPTSIVDTTIYKEIKGGG---HPYLTGLAIAGGIFCLGVEGAIVGPLL 870 Query: 335 MALIAVIWKESIMAIKENKEKISSNF 360 + + V S KE+ + N Sbjct: 871 LCGLYVAIDLSSSLFKESPSEEPINL 896 >gi|138896105|ref|YP_001126558.1| hypothetical protein GTNG_2468 [Geobacillus thermodenitrificans NG80-2] gi|134267618|gb|ABO67813.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] Length = 262 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 81/239 (33%), Gaps = 9/239 (3%) Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMI 171 + W + S I S + FA+ + + + + + Sbjct: 21 LIQTWQSYSSSIPQEIIDSLERSVNTVQQMLLSFATNLTQSLVHYIAAIPAFFIHFLVYL 80 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 +ALF D + Q + + + K + ++ + + Sbjct: 81 VALFLICLDLPQLKQGIRRYLSERTHQRLSMVVSQLSKAGVGFIKAQFLFSLVTFFLALA 140 Query: 232 AYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + GV + I ++ ++P G I +I G+ L + + + Sbjct: 141 GLLILGVDYAALMAFIIVVVDILPILGTGSVLVPWGIISIINGSTALGIGLIVL-FVIIT 199 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +V + + P + + + L + G + +GLLG FIGPV++ L+ + K ++ Sbjct: 200 VVRRIIEPKVFSTNLGISPLAALVSVYLGFQILGLLGAFIGPVIVILVETLVKAGVIKW 258 >gi|293552763|ref|ZP_06673424.1| transport protein [Enterococcus faecium E1039] gi|293559692|ref|ZP_06676220.1| transport protein [Enterococcus faecium E1162] gi|293569936|ref|ZP_06681023.1| transport protein [Enterococcus faecium E1071] gi|294615221|ref|ZP_06695102.1| transport protein [Enterococcus faecium E1636] gi|291587684|gb|EFF19561.1| transport protein [Enterococcus faecium E1071] gi|291591945|gb|EFF23573.1| transport protein [Enterococcus faecium E1636] gi|291603072|gb|EFF33263.1| transport protein [Enterococcus faecium E1039] gi|291606367|gb|EFF35773.1| transport protein [Enterococcus faecium E1162] Length = 345 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 119/356 (33%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDAD-----PVLQYIHTY 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 120 IERNDFFEQL----------QNGASIALGYLQDIGKMAVAFAMSFILS----FFFMIEKK 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ I K + + +IA+ L+ A + G Sbjct: 166 KTIVFSRLFLKSEFSWFFQDIYYFADKFVNTFGLVLEAQFVIALLNTLLTTIALAVFGFH 225 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + I I L P Sbjct: 226 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ +LP TF L+ R G+ GL +G + + K + KE Sbjct: 286 KLMSSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHLPKE 341 >gi|300113927|ref|YP_003760502.1| hypothetical protein Nwat_1251 [Nitrosococcus watsonii C-113] gi|299539864|gb|ADJ28181.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 383 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 70/192 (36%), Gaps = 6/192 (3%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVPKVI 211 G + ++ + M++ LF G + ++L + +I + I Sbjct: 173 GSLGAMAFVGQVATVVMLVLLF--LTSGDTYKRKLVKITGPTLSKKKVTVEILDDINIQI 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 R + I GLV A+ G+ G+I + + IP G + F A +I L Sbjct: 231 RRYLFVLVISGAFVGLVTWGAFLWIGLEQAALWGLIAGVASTIPYLGPAMVFAATTIVAL 290 Query: 271 IK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + G + + + I L P+L L + F GL+ G +GL Sbjct: 291 AQFGTLTMGLTVGAISLLITGIQGYWLTPWLTSRTSSLNAVVVFVGLLFWGWLWGPIGLI 350 Query: 330 IGPVLMALIAVI 341 + ++ +I V Sbjct: 351 VATPILIIIKVC 362 >gi|260662013|ref|ZP_05862909.1| EpsX protein [Lactobacillus fermentum 28-3-CHN] gi|260553396|gb|EEX26288.1| EpsX protein [Lactobacillus fermentum 28-3-CHN] Length = 366 Score = 67.9 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 118/331 (35%), Gaps = 15/331 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----KEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P+L +I + + + K + + A + + + L IV ++ + + Sbjct: 41 MPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLSIVVVIGVVSSVV 100 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 K++ + Q + +P++++ + + LW + + + L Sbjct: 101 APQLVTCVKLLFSGQSKV-IPQFINWLENESFLKSLWQQIDLSKINWTKVQSYLLNGASG 159 Query: 147 DF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F + AS+ ++I F I L F +++Q L P +I Sbjct: 160 TFSTVMSTASKVVSALTTTVVAIFFSIYLLLFK----DRLARQFKLLLTTYLPGQVARIL 215 Query: 205 RI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 R+ + S +G A+ G + +P +G + A+ A++P + Sbjct: 216 RVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTALVPIIGALM 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +V I ++ + A + ++ P +VG I LP + F ++ G Sbjct: 276 GASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVFVAVMVGGG 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+LG+ L A + K + + N Sbjct: 336 VSGILGMMFTVPLFAAFYQLLKTDVAKRQLN 366 >gi|254476937|ref|ZP_05090323.1| conserved domain protein, putative [Ruegeria sp. R11] gi|214031180|gb|EEB72015.1| conserved domain protein, putative [Ruegeria sp. R11] Length = 375 Score = 67.9 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 104/317 (32%), Gaps = 11/317 (3%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + F PV+ A ++ K + A I V L + Sbjct: 48 RAFAVPVILAFLLSLVFSGPCRWLRRKGIPEAVTAAAIVLSLV--------AGLTASTAI 99 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + A + V R L DI G A + + + I+ Sbjct: 100 LAIPASEWIEDAPRVAQQVERKLKDISGVAAAVAEADRRIEEATTGAADGAEDPVEVVIE 159 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA-YWKKISRI 206 + + +F++I FF G ++L S+ +I+ Sbjct: 160 DTSGPLTTVAVGAPMIVAQTLFVLILTFFMLASGNLFYERLVSVLPRFADKKRAIQIAYD 219 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V + + L +T + G G+++G + L G+P+ +A G++ M +P + VS Sbjct: 220 VEREVSRYLLAITCVNAGLGVIVGVSLGLLGMPNPLAFGLLAFGMNFVPFVGAVIGVIVS 279 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L + G V + + P+LVG + L + + Sbjct: 280 FGVALVSLPTLFDALTVAGIYLALTVIEGQVVTPWLVGRHLSLNTVVILISVAFWAWLWS 339 Query: 325 LLGLFIGPVLMALIAVI 341 ++G+ + L+ V+ Sbjct: 340 VMGMIMAVPLLVTFRVL 356 >gi|302671010|ref|YP_003830970.1| hypothetical protein bpr_I1651 [Butyrivibrio proteoclasticus B316] gi|302395483|gb|ADL34388.1| hypothetical protein bpr_I1651 [Butyrivibrio proteoclasticus B316] Length = 460 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 82/283 (28%), Gaps = 2/283 (0%) Query: 60 TFLAVIATVSVMCLFIVP-LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 T + + I+P L+ + + V + + L I Sbjct: 105 TMAIFLFMAYSLFRVIIPQLVSSIREIANNLPIYIKNVDDYSNLFLANNPELQQI-IDSQ 163 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + S+ + + + R I D + I I L Sbjct: 164 LDNYYETLSSYLTQKLLPLLPGNVNTIVRYASRSFISGIKIVFDLVVGFIVAIYVLNSKE 223 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 R + ++ + R V + G + ++ G++ + + Sbjct: 224 RFTTRGKKMAYAVLKEDAANELISGFRFVNYTFQGFIGGKLVDSLIIGVICYIGCMMLKI 283 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P V + VI + +IP P + +L+ + A ++ + L P Sbjct: 284 PYPVLISVIVGVTNIIPFFGPYIGGGMGALILVLISPVKALVFLIFVIVLQQFDGNILGP 343 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++G L F + G++G +G + A+ + Sbjct: 344 TILGNSTGLSSFWVIFAITLFGGLWGVVGWLVGVPIFAVFYAL 386 >gi|168698049|ref|ZP_02730326.1| hypothetical protein GobsU_00895 [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 89/265 (33%), Gaps = 5/265 (1%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + L + V +P ++P + S + + + + Sbjct: 85 LVVIAAVAALTTGLYALGVSVAGQFGQLPE---EVPRAIDRSRTYLERHEWGRWVLDQVT 141 Query: 139 TFLK-TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + +G + + F +++ + + D + +L Sbjct: 142 PLGQLPSGGSRLAGRLASFFSTTFGALGNLVLLTFLALYLAADPHTYLGGAVALIPPRHR 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 +++ R + +R LG + G+++ + W GVP V LG++ A++ +P Sbjct: 202 RRAEQVLRAIGFHLRRWLLGRLVAMTTVGVIVSAGLWGVGVPQFVVLGLLAAVLTAVPFI 261 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 PI+ + L + + + + + P + +LP + Sbjct: 262 GPIAAAVPGVALALAHGPPAGLGAVGVYVLAQAVENYVVTPLVQKRAAQLPPALALAAVA 321 Query: 318 GGVRTMGLLGLFIG-PVLMALIAVI 341 G+LGL P+L+A++ + Sbjct: 322 LAGVLFGVLGLIAASPLLVAVLVAV 346 >gi|260101818|ref|ZP_05752055.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260084372|gb|EEW68492.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|328468753|gb|EGF39727.1| putative permease [Lactobacillus helveticus MTCC 5463] Length = 344 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 115/339 (33%), Gaps = 17/339 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + R+++ II+ LY ++ +L I + + + T V+ Sbjct: 9 KNNIPLRRFVVFLIIVAFLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYVPKMPTGAIVV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T ++ L L+++ + M LV ++ + + +A+ +K Sbjct: 69 VTYLII------LALLYFFITVYMPMLVGQISKMVKSVMAFYESDESSRLLSYATHYISK 122 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + Q+ + + F A+ G + + +S+I + S Sbjct: 123 NEIITQA----------KHAMTFAFHTATSIGTLTITTFMSLILSFFYTIELKKMREFSS 172 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IAI + + +P VALG Sbjct: 173 LFVKSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAIMKMPQIVALG 232 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I++++P G IS +SI G I A +F+ I I L P + Sbjct: 233 LMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYAIYIFVMIMIIHAIEAYVLNPKFMASK 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ G GL +G + + + Sbjct: 293 TELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLN 331 >gi|302873320|ref|YP_003841953.1| hypothetical protein Clocel_0411 [Clostridium cellulovorans 743B] gi|307688512|ref|ZP_07630958.1| hypothetical protein Ccel74_10158 [Clostridium cellulovorans 743B] gi|302576177|gb|ADL50189.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 337 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 21/350 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + I + I+ +I+ +Y LK +L I F I+ +K Sbjct: 5 ENITKSSIIKKMAIIGVIIAIIYMLKSMINLLLLTFIFTFIFSQIHKFVYTKVNSWIKLS 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + T+SV + + ++ + + + Q I + LS ++ Sbjct: 65 SKMVTISVYVIILAIIVIMS----------IRYIPQVTQQLIDIINLLSTFNLEQVHDKV 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + ++I D I A++ G + ++++ + FFF + Sbjct: 115 GDTIFNIIKEIQIQD---YLKQSEDKIIELATQIGT----FSMNVVIAFLLSFFFILEKE 167 Query: 183 SIS---QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 I Q+L+ Y K I +IA ++ A + G P Sbjct: 168 EIIAFGQRLEGSKLAFAYEYCKYCGGIFLNSFGKVIQLQIVIAFINSVLSVIALAIMGFP 227 Query: 240 SHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G + I+ +IP I +SI G + + + A+ + L P Sbjct: 228 QALGIGTMIFILGLIPVAGVIVSLVPLSIIAFNIGGMVKIIEVIIMIAVLHALESYVLNP 287 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+ KLP F L+ G MG+ GL +G L I+ + Sbjct: 288 KLMSMKTKLPVFMVFVILLVGEHLMGVWGLLLGIPLFIFFLDIFDIKVEG 337 >gi|314933212|ref|ZP_07840577.1| putative membrane protein [Staphylococcus caprae C87] gi|313653362|gb|EFS17119.1| putative membrane protein [Staphylococcus caprae C87] Length = 363 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 115/331 (34%), Gaps = 15/331 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS-VMCLFIVPLLFLFYYGMLEM 89 F P L + + + P + + +++ ++ + + + F+ + + Sbjct: 41 FLPFLISGFLFYICLPFQNILER--WGFPRWASILTIFIGLIAIIAIVVSFIAPIIISNI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + + + + + + T ++ T + +N + +I Sbjct: 99 NNLIKQTPALQKEAEHIINF--SLKQMDKLPDDVTHRINKAVKSVGDGATSVLSNSVTYI 156 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F S +I + L + +D + + + + + + Sbjct: 157 TSFIST--------VFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFIVDLLKDLNF 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 ++S G +++ G++L Y + G+P L + + +IP G +SFT +I Sbjct: 209 TLKSYIQGQVTVSVILGIILYIGYSIIGLPYTPLLVLFAGVANLIPFLGPWLSFTPAAIL 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 +I+G + + I + + P ++G + + L ++ G + Sbjct: 269 GIIEG-PTTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLI 327 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A+I + + +K +S+ Sbjct: 328 LIAVPLYAVIKTLVSNIFKYRQRIIDKANSD 358 >gi|285019744|ref|YP_003377455.1| hypothetical protein XALc_2984 [Xanthomonas albilineans GPE PC73] gi|283474962|emb|CBA17461.1| hypothetical protein XALc_2984 [Xanthomonas albilineans] Length = 353 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 110/350 (31%), Gaps = 20/350 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ M + + + + L V A+++G + S + + +S Sbjct: 18 RVLVVMALGGLALLAWQLSELLLIVFGAIVVGVLLHGLASVLCKRLPVPEWAALALVILS 77 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +L ++ + + A WL P G + + Sbjct: 78 LLLALSAIVLLFGSEVAAQIDAFRTTLPAAWNK---FHAWLQSGPLGPQIDRIPEQL--- 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 NG + A M + + M + + Q L Sbjct: 132 -------------RNGASTVAAHAGAIVMSAGGGVTNAVLMTVGGIYLAAQPRLYRQGLL 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + +R+ G + G + G WL VP + +G++TA Sbjct: 179 RLLPRDQRGVADAALGASGQALRAWLAGQLLAMAVIGTLTGVGLWLLHVPVALGIGLLTA 238 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ IP PI+ +I L + A L + + L+P + + LP Sbjct: 239 LLDFIPIVGPIAAAVPAILLGFTVSPQVALGALLLFVVLQQLEGHLLQPLIQARAVDLPP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFI-GPVLMALIAVIWKESIMAIKENKEKISS 358 F L G +G +G+ + P+ + +I + + + E+ S Sbjct: 299 ALLLFSLFGIGMLLGPMGVVLAAPLTVVTFVLIKRLYVQHALGDAEEAES 348 >gi|205375598|ref|ZP_03228385.1| hypothetical protein Bcoam_21753 [Bacillus coahuilensis m4-4] Length = 353 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 118/320 (36%), Gaps = 8/320 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SLY L P++SA I P + +I V + + L F+ Sbjct: 23 SLYIL-PISIPLISAFITALFLDPAVRVLRKRFNIKRKLSVLIVFVLFLLFSGLSLYFIT 81 Query: 83 YYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGG--MWASELWTKHLSHPQSLKILSET 139 + E + ++ NQ + D+ +E+ + + ++ Sbjct: 82 TKVIGEAIQFAEEIPTYINQISDKWEIYEKDLLSASEDLPNEVVEQIQDEVGNFFNSVKS 141 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + ++ S F +Y ++I+ +IALF F D I + Sbjct: 142 GLTNDYVNL--NKISSFIGGIPNYLVNILVYLIALFLFMIDLPKIRTTIYKHLTEKTADK 199 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 ++ + V+ ++++ + + + + V+ I+ IP G+ Sbjct: 200 VNFMTSRLSYVVLGFLKAQFLVSVIIFIATLLGLLWIAPEAALVMSVVIWIVDFIPLIGS 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + Y I GNI T L + + L I+ +T+ P ++G I L L T + Sbjct: 260 IVIMAPWFTYHFITGNIGLGTELAILATVLL-IIRRTVEPKVMGRHIGLSPLATLIAMYL 318 Query: 319 GVRTMGLLGLFIGPVLMALI 338 G++ GLLG FIGP ++ L Sbjct: 319 GLKLFGLLGFFIGPFILILF 338 >gi|218768223|ref|YP_002342735.1| putative integral membrane protein [Neisseria meningitidis Z2491] gi|121052231|emb|CAM08554.1| putative integral membrane protein [Neisseria meningitidis Z2491] Length = 356 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|119491388|ref|ZP_01623407.1| hypothetical protein L8106_14015 [Lyngbya sp. PCC 8106] gi|119453383|gb|EAW34546.1| hypothetical protein L8106_14015 [Lyngbya sp. PCC 8106] Length = 383 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 108/334 (32%), Gaps = 8/334 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + L+ L+ + + +++I+ + + + +IA V+ Sbjct: 9 FFCLILALLILWQFRQIVLLIFTSVILAIALNSLVRWL-QRFRLNRNLAVIIALSLVVLF 67 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + + ++L+ I RW+ ++ + + L Sbjct: 68 GTLFFSLVMPPFLTQFQQLIELAPRGFNQFI---RWVDNLLENPPI--WFPQQLEFRVPT 122 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + F F L L ++ +I+ F + + L Sbjct: 123 IPEIAQQVGPLAQNVLGNF-FAFFSNSLTTLLQLLLVIVLTLMFLSNPVAYRTVFVRLFP 181 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I V+ G+ I +I + + +P A ++ + Sbjct: 182 SFYRRRADAILCGCETVLLQWMAGIVINSIFIASLSAIGLLILDIPFVFAHALLAGVFNF 241 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P + + + + + A + + + + P ++ + L T Sbjct: 242 IPNIGPAASVVFPVSVALLDTPWKALTVIILYIVIQNLESYWFSPMIMQKQVSLLPAATL 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + R G LGL + + +A+++ IW E + Sbjct: 302 TAQIFFARFFGFLGLILA-LPLAVVSKIWIEEAI 334 >gi|294620005|ref|ZP_06699370.1| transport protein [Enterococcus faecium E1679] gi|294622423|ref|ZP_06701447.1| transport protein [Enterococcus faecium U0317] gi|291593727|gb|EFF25236.1| transport protein [Enterococcus faecium E1679] gi|291598067|gb|EFF29175.1| transport protein [Enterococcus faecium U0317] Length = 345 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 119/356 (33%), Gaps = 23/356 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H P + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVINFYEHQPKDAD-----PVLQYIHTY 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q NG + G + + + +S I FFF + Sbjct: 120 IERNDFFEQL----------QNGASIALGYLQDIGKMAVAFAMSFILS----FFFMIEKK 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ I K + + ++A+ L+ A + G Sbjct: 166 KTIVFSRLFLKSEFSWFFQDIYYFADKFVNTFGLVLEAQFVVALLNTLLTTIALAVFGFH 225 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ I+++IP I +S +G I + + + I I L P Sbjct: 226 QLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ +LP TF L+ R G+ GL +G + + K + KE Sbjct: 286 KLMSSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHLPKE 341 >gi|221134975|ref|ZP_03561278.1| hypothetical protein GHTCC_08591 [Glaciecola sp. HTCC2999] Length = 357 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 104/325 (32%), Gaps = 22/325 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + ++L + P L ++ I P+ + K I+ Sbjct: 7 TAKVMVITAAVIVVLAGIKAASAIMVPFLLSIFIAIACSPLINHASRYKIPR-----WIS 61 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V+ L IV L + E + + W Sbjct: 62 VTLVILLIIVFGFMLAGLVGQSLGEFRQNLPNYQSQ--------------LSVEFAWVIE 107 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + FL A+ F ++ +I+ + F + S+ + Sbjct: 108 QLAKVNVIVDKNLFLSYFDPAVAMSVATNFLSGMGGVLSNVFLIILTVIFMLFEAESMPR 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ P + K + +++++G G+ +G ++ VP + V Sbjct: 168 RIHVALRD--PGMKMQHIDRFLKSVNDYLAIKSLVSLGTGVFIGVWLFVLDVPHFMLWAV 225 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ IP G+ I+ + + + A L I ++ + P +G + Sbjct: 226 LAFLLNFIPNIGSIIAAVPAVLIAFVDQGLATAGLAGLGFIIVNTVMGNMIEPRFMGRGL 285 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFI 330 L L F L+ +G +G+ + Sbjct: 286 GLSTLVVFLSLIFWGWLLGSVGMLL 310 >gi|56479467|ref|YP_161056.1| hypothetical protein ebA7105 [Aromatoleum aromaticum EbN1] gi|56315510|emb|CAI10155.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 378 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 105/326 (32%), Gaps = 13/326 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 AP + A + + P + + ++ ++V+ + + L ++ Sbjct: 43 PILAPFVIAAVFAYICDPAVNWMVRRRIPRP--------LAVLLVILGLGAILLLLLLIL 94 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF--LKTNGI 146 + + + + L+ ++ + + Sbjct: 95 APMIYREAIALVGRLPDLIELLNSRVAPRLMERFGIDLQLDAAFVRTWITENWSTAQDLV 154 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I + G + ++ + + +F+ +D + + ++ +I Sbjct: 155 PVILGHLRQGGSALVGLAALVLLIPVVMFYLLQDWPHLVTNVQAIIPRPMLPRTLRIFHD 214 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTA 264 + V+ G + + + WLAG+ + +GVIT ++ IP G A Sbjct: 215 IDSVLSQFLRGQLSVMLLLAVFYSVGLWLAGLKFALPVGVITGLLVFIPYVGFGGGLILA 274 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + LL + + + I L P+LVG I L + F L+ + G Sbjct: 275 ILTALLQADGWSPLIGVAIVYGLGQAIESFVLTPYLVGERIGLHPVAVIFALMAFGQLFG 334 Query: 325 LLGLFIG-PVLMALIAVIWKESIMAI 349 +G+ + P A++ + + + Sbjct: 335 FVGVLVALPASAAILVGLRELRAAWL 360 >gi|152975277|ref|YP_001374794.1| hypothetical protein Bcer98_1483 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024029|gb|ABS21799.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 333 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 121/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R+++ I+ LY LK +L I+ F +K + + + Sbjct: 9 QSRGFQRFIVFVILAFLLYGLKSMINLILITFILTFLMDRFQRFISNKLKINRKVVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + L +++ +L+ + L QH P + Sbjct: 69 YSVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQH-----------PPDNEIIKYVLST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INQMEVSKYIEQ------GVDVIYQSVANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IAI ++ A G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFSQRFARSFGKVIEAQFLIAIVNCILTVIALVFLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ ++ +IP G IS + I G I + + + + L P + Sbjct: 228 LAIMIFLLGLIPVAGVIISLFPLCIIAYNIGGIMYVVYILIVITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + +++ Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVFE 328 >gi|309378483|emb|CBX22908.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 356 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 120/337 (35%), Gaps = 12/337 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L Sbjct: 19 FAALVWLIFALGDALTPFAVAAVLAYVLDPLVDWL-QKKGFNRAVASMTVMVFALLLLAA 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + + +VS++ Q + L + + + S L+ Sbjct: 78 LLLIIVPMLVGQFNSMVSRLP---QLAGFMQNTLLPLLKDTVGNYVEIDQASVIAWLQAH 134 Query: 137 SETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T F + R +S + L + + L D S + L Sbjct: 135 TGELSNTLKAWFPVLMRQSSNIVSSIGNLMLLPLLLYYFL----LDWQRWSCGIGKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFADTYTRITGHLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ + L +W + F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFASWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|254426867|ref|ZP_05040574.1| conserved domain protein, putative [Alcanivorax sp. DG881] gi|196193036|gb|EDX87995.1| conserved domain protein, putative [Alcanivorax sp. DG881] Length = 363 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 13/343 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I +++ F G APV +A+++ + + + + + M L I L+ Sbjct: 28 IGLTIAFFGGMLAPVFTAMVVAYLMQGLVGALERR-GVKRMLAVGLVFTLFMGLLIATLV 86 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ LV + + WL +P + S ++ Sbjct: 87 VLLPMVWRQLVLLVQDQLPHVLKNGEI--WLRGLPAHYPEIISMEQVNSIVAVIQREVAE 144 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + ++ + ++ + + +FFF +D ++ + Sbjct: 145 AGQGVLTLSLASI-----PNLVEIMVFLVLVPLLVFFFLKDRETLVNWMLGFLPR-KRRI 198 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + + + I + G I + G A+ L + V L V+ + ++P GA Sbjct: 199 LSHVWQEMDGQIANYVRGKAIEILLVGGATFIAFVLLDMNYAVLLAVLVGLSVVVPYIGA 258 Query: 259 PISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + V+ ++ A + ++G I FI L P L + L + + Sbjct: 259 TVVTLPVAAVAYVQFGWGGDFALVMIVYG-IIQFIDGNILVPLLFSEAVNLHPVAIITAI 317 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + GL G+F L LI + + K+ + Sbjct: 318 LLFGGLWGLWGVFFAIPLATLIKAVINAWPRQADYSPGKLEAQ 360 >gi|227515057|ref|ZP_03945106.1| permease [Lactobacillus fermentum ATCC 14931] gi|227086579|gb|EEI21891.1| permease [Lactobacillus fermentum ATCC 14931] Length = 366 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 118/331 (35%), Gaps = 15/331 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----KEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P+L +I + + + K + + A + + + L IV ++ + + Sbjct: 41 MPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLSIVVVIGVVSSVV 100 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 K++ + Q + +P++++ + + LW + + + L Sbjct: 101 APQLVACVKLLFSGQSKV-IPQFINWLENESFLKSLWQQIDLSKINWTKVQSYLLNGASG 159 Query: 147 DF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F + AS+ ++I F I L F +++Q L P +I Sbjct: 160 TFSTVMSTASKMVSALTTTVVAIFFSIYLLLFK----DRLARQFKLLLTTYLPGQVARIL 215 Query: 205 RI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 R+ + S +G A+ G + +P +G + A+ A++P + Sbjct: 216 RVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTALVPIIGALM 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +V I ++ + A + ++ P +VG I LP + F ++ G Sbjct: 276 GASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVFVAVMVGGG 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+LG+ L A + K + + N Sbjct: 336 VSGILGMMFTVPLFAAFYQLLKTDVAKRQLN 366 >gi|213421990|ref|ZP_03355056.1| hypothetical protein Salmonentericaenterica_31373 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 215 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 69/204 (33%), Gaps = 3/204 (1%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N D + +++ + L + ++ + + +FF +D + + + ++ Sbjct: 3 NMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAG-QV 61 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 + + I + G + + G+ + L G+ + L V+ +IP GA + Sbjct: 62 WNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVT 121 Query: 263 TAV-SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V + L G F I + L P L + L L +V Sbjct: 122 IPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGG 181 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G G+F L LI + Sbjct: 182 LWGFWGVFFAIPLATLIKAVVHAW 205 >gi|113476022|ref|YP_722083.1| hypothetical protein Tery_2392 [Trichodesmium erythraeum IMS101] gi|110167070|gb|ABG51610.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 349 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 99/318 (31%), Gaps = 11/318 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + L+ ++ V +A++I T + S + + +I+ + L Sbjct: 9 IFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQS-LKIKRSLAVLISVSLFILL 67 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + ++L++ V + WL+ + + + Sbjct: 68 IVTFFWVIVPPLAEQFQQLITIVPQGINK---LNDWLNILRDQLPNQLKEQLPDIDINEI 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + A F LS++ + D S Q + L Sbjct: 125 IPQLQPILNQ-----LINNAGEFVGNTFGIFLSLLLTFVLSMMMLVDPISYRQGMIKLFP 179 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I + L + L+ + +P A V+ ++ + Sbjct: 180 SFYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVLTL 239 Query: 254 IP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G IS + L+ + +A L ++ + I L P+ + + L T Sbjct: 240 IPHIGLIISIIPPMVIALLYSPLKSALVLLIY-ILIQQIEHNILNPYFIVKKVSLLPAIT 298 Query: 313 FFGLVGGVRTMGLLGLFI 330 V G+LGL + Sbjct: 299 LISQVFFAHFFGVLGLVL 316 >gi|308389313|gb|ADO31633.1| putative transporter [Neisseria meningitidis alpha710] Length = 356 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMFVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|206580879|ref|YP_002238720.1| inner membrane protein YdgG [Klebsiella pneumoniae 342] gi|206569937|gb|ACI11713.1| inner membrane protein YdgG [Klebsiella pneumoniae 342] Length = 374 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 106/328 (32%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL + P+ + + Sbjct: 37 TLNGLKMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLVRCRVPR-VLAI 95 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ L IV L L + L + + WL + Sbjct: 96 SMLIGLIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRM---------- 145 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + K + + + + SI +++ + F + Sbjct: 146 --------GFTVSVVELNKYIDPNAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQ 197 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L L P + + + T I++ GLV+ L V Sbjct: 198 LPAKLQQLMSR--PVEGMGAIQRAIDSVSHYLVLKTAISLVTGLVVWGMLVLLDVRFAFM 255 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ + +L+ G ++ A + I + L P ++G Sbjct: 256 WGLLAFALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRVMG 315 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 316 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 343 >gi|88809887|ref|ZP_01125393.1| hypothetical protein WH7805_10938 [Synechococcus sp. WH 7805] gi|88786271|gb|EAR17432.1| hypothetical protein WH7805_10938 [Synechococcus sp. WH 7805] Length = 359 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 101/296 (34%), Gaps = 13/296 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L+A +I F + V+ T+ + + + L + Sbjct: 30 LAPFPGLFLTAALIAFLLDIPCVWLTGR-GLPRWMAIVMVTLVTISALVFAGITLVPLLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + W++ + A L ++ L + Sbjct: 89 DQLGQLINALPGLLSE---AEGWITSLQSLADARGLPSEFGDLSSDLLTRAGRVASQISQ 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + G ++ + +++ FF G SI+ L + ++ Sbjct: 146 RLLGILGATLGT-----TINTVIVLVLAVFFLLGGRSIAAGLARWLPTDWREL---VTST 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + + +P V V+ +IP + ++ AVS Sbjct: 198 LSRTFRGYFAGQVLLALILAVGQIVVFTVLKIPYGVLFAVLIGFTTLIPYASALTIIAVS 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + + + + +VD+ ++P L+G + L L G + Sbjct: 258 GLLAFQ-DPKTGLEILVAAILVGQLVDQVIQPRLMGSIVGLQPAWLLIALPIGAKA 312 >gi|331087230|ref|ZP_08336300.1| hypothetical protein HMPREF0987_02603 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408916|gb|EGG88377.1| hypothetical protein HMPREF0987_02603 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 357 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 99/314 (31%), Gaps = 6/314 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + + ++ P A ++ + P+ + + + + +A + ++ + L Sbjct: 28 MYIGIKYILPLVLPFFCAFLVAYLLRPLVRNIHAHTKLNQGAVAGGLLLIILGVVGTALW 87 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 FL + + + G++ E + ++E Sbjct: 88 FLGSTLVQQFCYFIEHYGFYAGKMELFLDQCCRSMSGVFGMEAGELESLFVTRMATIAEN 147 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + I + II + + D + ++ + + Sbjct: 148 IERQFVPKLMANSWGYVRTIIEVAGVGIIIFVSIIL-LVNDFDKLKEKASHSIGY---RH 203 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + KI + + + II + + L P + LGV+ + +P G Sbjct: 204 FVKILKRIFHMGGMFLKAQLIIMSVIAALCTVTFLLLKNPYALLLGVLIGFLDALPVLGT 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + ++I +G A I + L P L+G + LP + + Sbjct: 264 AVVLYPLAIVQAFQGRFLFAAVYAGLSVICNLTRE-FLEPKLIGEHLGLPAIMVLVTVYV 322 Query: 319 GVRTMGLLGLFIGP 332 G+R G+ G+ GP Sbjct: 323 GIRLFGVSGVITGP 336 >gi|229017259|ref|ZP_04174165.1| UPF0118 membrane protein [Bacillus cereus AH1273] gi|229023432|ref|ZP_04179933.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228737880|gb|EEL88375.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228744049|gb|EEL94145.1| UPF0118 membrane protein [Bacillus cereus AH1273] Length = 339 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 117/338 (34%), Gaps = 19/338 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+++ LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILVLVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKVVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + L +++ +L+ + L QH P + + + E+ Sbjct: 69 YIILVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQH-PPDNEMIRYVLSAINEMEVSKYI 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + + S F ++ + +S Sbjct: 128 EQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIISFT-------------SKFKD 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ +R KVI + F +IA+ ++ A + G P + L V Sbjct: 175 SKLKIFYEEIAYFGERFARSFGKVIEAQF----LIAVVNCVLTVIALVILGFPQLLVLAV 230 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP G IS + I G + + ++ I + L P + Sbjct: 231 MVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITIIHALESYFLNPKFMSAKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 291 NLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|310779775|ref|YP_003968107.1| protein of unknown function UPF0118 [Ilyobacter polytropus DSM 2926] gi|309749098|gb|ADO83759.1| protein of unknown function UPF0118 [Ilyobacter polytropus DSM 2926] Length = 361 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P + L+I P+ + F +K + V + + + I L + + Sbjct: 40 YIQPFIYGLVIAVILEPLITFFSNKFKFGRRLGIVTSLLVFSFILIGVFLIVIPPLSKSI 99 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI--- 146 +L+ Q W+ + + + ++L + + Sbjct: 100 GDLIESFP---QMKTKSQTWVIKVFEANKDRLAFLDEKTLKENLMSFIGSQVANTQSLVI 156 Query: 147 ---DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + I + +F + +++ F++ +F I + L + + Sbjct: 157 SFFEKIVKLTFSIVDVFFGFLIAVYFLLYKKYFI----GFIRKTLSIILKKEAVNETLDF 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + G +++++ G+V + VP V + + + MIP I Sbjct: 213 LYESREIFLNYLAGRSLVSLFVGVVCFIIMFFTNVPYAVLISFVIGLGNMIPYIGSIIAG 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +S L++ +++ + I L P ++G + + ++ G Sbjct: 273 IISTVLVLFTLPLKVIPMWIAILVAQQIDSWILGPKILGNSVGMNPFWVVTAVLIGGNVG 332 Query: 324 GLLGLFIGPVLMALIAVIW 342 G +G+ IG + A+I +I+ Sbjct: 333 GPIGMLIGVPVFAMIKIIY 351 >gi|256823487|ref|YP_003147450.1| hypothetical protein Kkor_2273 [Kangiella koreensis DSM 16069] gi|256797026|gb|ACV27682.1| protein of unknown function UPF0118 [Kangiella koreensis DSM 16069] Length = 348 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 114/335 (34%), Gaps = 25/335 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-----KKEE 57 ET ++ F+I+ L F PV+ +L + P+Y F K++ Sbjct: 4 ETSRVTSALVAIAATFLIIAGLKAASVFIVPVILSLFVAIILGPLYFFFARVKLPIIKKD 63 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +LA+I V +M LF + L + + +PR+ + Sbjct: 64 MPDWLAIILVVVIMSLFFFVIGTLVGNSVEQFSN-------------NLPRYEMMLRAKF 110 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 +W +++ + + ++ + +I+ F Sbjct: 111 EGLVVWL----AGHGVEVPQTPLAERFSPGVMMNLSASILNGLGGVLSNTFLIILTSIFL 166 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + ++ + + ++ K+ R + +++ G ++ WL G Sbjct: 167 LMEASIFGDKMRRAFPDVESKAHLGLGEVISKIKRYASIKSV-VSLLTGAIISLWLWLIG 225 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKT 295 V G+I + IP G+ I+ + + + + L G + + F+V Sbjct: 226 VEYPFLWGLIAFMFNFIPNIGSIIAAIPAVLLAWLTSDTLSTPLLAAAGYLAVNFVVGNI 285 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + P +G + L L F L+ +G +G+ + Sbjct: 286 IEPKFMGKGLGLSTLVVFLSLLFWGWVLGPVGMLL 320 >gi|254975639|ref|ZP_05272111.1| hypothetical protein CdifQC_10029 [Clostridium difficile QCD-66c26] gi|255093026|ref|ZP_05322504.1| hypothetical protein CdifC_10289 [Clostridium difficile CIP 107932] gi|255314768|ref|ZP_05356351.1| hypothetical protein CdifQCD-7_10487 [Clostridium difficile QCD-76w55] gi|260683651|ref|YP_003214936.1| hypothetical protein CD196_1915 [Clostridium difficile CD196] gi|260687311|ref|YP_003218445.1| hypothetical protein CDR20291_1958 [Clostridium difficile R20291] gi|306520501|ref|ZP_07406848.1| hypothetical protein CdifQ_11816 [Clostridium difficile QCD-32g58] gi|260209814|emb|CBA63667.1| putative membrane protein [Clostridium difficile CD196] gi|260213328|emb|CBE04908.1| putative membrane protein [Clostridium difficile R20291] Length = 361 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 108/318 (33%), Gaps = 4/318 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + ++ + L +L + F+ +F+ Sbjct: 102 NRLINEMPMYTDYIDSFIE--KNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFL 159 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 160 I-YTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + ++ + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESI 346 F+ + A++ + I Sbjct: 339 FLSVPIAAVVKTYVDKYI 356 >gi|223042949|ref|ZP_03612997.1| putative membrane protein [Staphylococcus capitis SK14] gi|222443803|gb|EEE49900.1| putative membrane protein [Staphylococcus capitis SK14] Length = 363 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 115/331 (34%), Gaps = 15/331 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS-VMCLFIVPLLFLFYYGMLEM 89 F P L + + + P + + +++ ++ + + + F+ + + Sbjct: 41 FLPFLISGFLFYICLPFQNILER--WGFPRWASILTIFIGLIAIIAIVVSFIAPIIISNI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + + + + + + T ++ T + +N + +I Sbjct: 99 NNLIKQTPALQKEAEHIINF--SLKQMDKLPDDVTHRINKAVRSVGDGATSVLSNSVTYI 156 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F S +I + L + +D + + + + + + Sbjct: 157 TSFIST--------VFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFIVDLLKDLNF 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 ++S G +++ G++L Y + G+P L + + +IP G +SFT +I Sbjct: 209 TLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFTPAAIL 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 +I+G + + I + + P ++G + + L ++ G + Sbjct: 269 GIIEG-PTTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLI 327 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A+I + + +K +S+ Sbjct: 328 LIAVPLYAVIKTLVSNIFKYRQRIIDKANSD 358 >gi|83647590|ref|YP_436025.1| permease [Hahella chejuensis KCTC 2396] gi|83635633|gb|ABC31600.1| predicted permease [Hahella chejuensis KCTC 2396] Length = 353 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 117/341 (34%), Gaps = 22/341 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLS----ALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I+FI+LV+ + FF +L+ +++I + + AV++ + Sbjct: 18 AVILFILLVAGVLVMAFFGAMLAPVIGSIVIAYILQGLVIKLQRLGMGH--IYAVLSVFA 75 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V L + L ++++ S + + +P + Sbjct: 76 --LFVGVTLASVLLILPLMVRQVTSLFQELPSMMTNLQTLIKLLPEQYPQFFTEESVVGL 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L T ++ F+ L + + + I +FFF +D I L Sbjct: 134 SRQLTTEV-----TKITQWVFSFSLSSIPTLLAIMIYAVLVPIMVFFFLKDRGVILNSLS 188 Query: 190 SLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 SL L W + + IR L + I+ G+ A+ L G+ + L V Sbjct: 189 SLLPTERRLMTNIWAEANIQFANYIRGKVLEILIV----GVATYVAFVLMGLNYSLLLAV 244 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + +IP GA I V++ L + L + + + L P L Sbjct: 245 LVGLSVVIPYIGAAIVTIPVALIALFQWGWGPDFIWLMVAYGVIQALDGNVLVPLLFSEV 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G+ G+F L L+ I+ Sbjct: 305 VNLHPVVIIVSVLVFGGLWGIWGVFFAIPLATLLKAIFSAW 345 >gi|15603870|ref|NP_246944.1| hypothetical protein PM2005 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722446|gb|AAK04089.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 417 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 111/337 (32%), Gaps = 20/337 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + IIL + P L +L I PI S+K +LA+ + ++ + Sbjct: 18 IVIILAGVKVASEIAVPFLLSLFIAIICSPIIRFMTSRKVPH--WLAITLLLLMILVVFF 75 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L L E + + + + + L L + Sbjct: 76 SVLSLINSTAREFTQSIPQY---------------RLLLSERINALVLLAKKWNIPLDLS 120 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +E ++ I S + F ++ + + + F + +L + Sbjct: 121 TERTMEYMDPSVIMNLVSSTLLSFSGVVTNVFVLFLVVIFMLSEAPFAKHKLALVFSSDV 180 Query: 197 PA--YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + S T+ ++ G+ + L V + ++ ++ I Sbjct: 181 RDVHREEHYINRILQGVISYLGVKTLTSLLTGVCVYILLELTDVQYAILWATLSFLLNYI 240 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G+ I+ + + L+ + + IV + P ++G + L L F Sbjct: 241 PNIGSIIAAVPIVVQALLLNGFPTGLGVAIGVGAVNMIVGNIIEPKMMGRTLGLSTLVVF 300 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ +G +G+ + L ++ + + S +K Sbjct: 301 LSLLFWGWLLGTVGMLLSVPLTMVLKIALEASPETVK 337 >gi|307721500|ref|YP_003892640.1| hypothetical protein Saut_1581 [Sulfurimonas autotrophica DSM 16294] gi|306979593|gb|ADN09628.1| protein of unknown function UPF0118 [Sulfurimonas autotrophica DSM 16294] Length = 341 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 116/328 (35%), Gaps = 23/328 (7%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+L + P L +L I P+Y+ F S +++ V+ +FI+ Sbjct: 16 VVIVLAGIKSASVIIIPFLLSLFIAIILSPLYNYF-----NSKGIADILSVTLVITVFIL 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L F+ + + + + Q + + + I Sbjct: 71 FLAFVAKLIGTSVHDFSANIDTYAQK--------------LSGYYQLISTYAASLGIAIS 116 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + +FA+ + +I+ + F + ++++ H Sbjct: 117 TDDISNLINMKQAMKFATSIIQSMGSMFTNGFIIILTVVFMLLESQYFVKKVEFADGH-- 174 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + I++ + +I++ G+++ + G G++ ++ IP Sbjct: 175 -QETIAHIETIFSKIKNYMVLKALISLLTGVIVWLSLSFIGTDYAFLWGILAFMLNFIPN 233 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + L++ +A + L + ++ + P ++G + L L F Sbjct: 234 IGSIIAAIPAVLITLVQLGAMSALLVTLLYTVINVVIGSIVEPKVMGKGLGLSTLIIFLS 293 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ +G++G+ + L + +I+ Sbjct: 294 LLFWGWLLGIVGMLLSIPLTIMAKIIFD 321 >gi|317131258|ref|YP_004090572.1| protein of unknown function UPF0118 [Ethanoligenens harbinense YUAN-3] gi|315469237|gb|ADU25841.1| protein of unknown function UPF0118 [Ethanoligenens harbinense YUAN-3] Length = 366 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 127/362 (35%), Gaps = 27/362 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWP-------IYSSFISKKEESSTFLA 63 + R +I +++ L L+ + L ++ + ++ +K + +A Sbjct: 13 VRRILIFIVMVALLALLRSMLSIFLLTFMLVYIGNSAEKAVSQLFLKVFRRKADPRVVVA 72 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ + ++ L ++ L + ++ +L++ + + Sbjct: 73 VLYALVILALVML-LWIYIPVIVRQISDLITNMTDYFTSVSKTKASAGGRFSLESITAFV 131 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF- 182 + H+ + L+ +G I +F + G + IFM + L F+ G Sbjct: 132 SSHVDVSKYLE---------SGGTSIAQFLTNLGTASFN-----IFMSLILSLFFLLGKP 177 Query: 183 ---SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + +Q + + R + +I+ + A + G P Sbjct: 178 SVVAFGRQFKNSKLSWMYEDMRYFVRKFSNSFGAVIQTQLLISCINTTISTVALLIMGFP 237 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 S + L + ++ ++P G IS + I ++G I + + A+ + L P Sbjct: 238 SVIGLAAMIFVLGLVPVAGVFISLVPLCIIGYVQGGITKVIWVLVLIAVLHALEGYVLNP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +LP TF L+ +GL GL IG L I + + ++ + S Sbjct: 298 KLMSNKTQLPVFITFLVLLIAEHLIGLWGLVIGLPLAVFILDVLEVLPQGGRQETRRPLS 357 Query: 359 NF 360 F Sbjct: 358 RF 359 >gi|219669720|ref|YP_002460155.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] gi|219539980|gb|ACL21719.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] Length = 365 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 9/311 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVL---SALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ + M + V L F A L A I P+ F+ + S AV+A Sbjct: 27 KVITFFFMEFMPVFGQVLSQFLAAFLPFIIAFFIALLLEPLVLRFMQGLKASRPIAAVLA 86 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + + E+ +L + L I + + Sbjct: 87 LVLAILGIGSIVFLIVVRLYTELSDLGNSFPSYGYLVGFFNNILGTIDNFIQLNPQIQIS 146 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +++ I S G + F S + ++ ++A FF + Sbjct: 147 INNATQGLIDSLQGWALTGSKVLLNFISA----LPGVFIVLVVSVVATFFMSASYPGVKN 202 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L + + +SR + + I+ G++L G P +G Sbjct: 203 FFSNLVPRKWKPGARSVSRALGAAVVGFVRAEVILISVTGIILTVGLLWMGNPYAFTIGF 262 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I+A++ ++P G + F + L I G++ L + I ++ + L P ++ I Sbjct: 263 ISALLDLLPIVGTGMIFVPWIVGLFILGSVSEGIKLLIIYLIA-TVIRQILEPKVMSQNI 321 Query: 306 KLPFLPTFFGL 316 + L T + Sbjct: 322 GIHPLATIISM 332 >gi|302339385|ref|YP_003804591.1| protein of unknown function UPF0118 [Spirochaeta smaragdinae DSM 11293] gi|301636570|gb|ADK81997.1| protein of unknown function UPF0118 [Spirochaeta smaragdinae DSM 11293] Length = 359 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 97/294 (32%), Gaps = 13/294 (4%) Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++V + + I + + + E ++L V+ + + VP L P G Sbjct: 77 RLAITLSSVIIFSILIFGISGIIPIILDEGRKLFP-VLRDSFLSLSVPDALRQNPFGQEL 135 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + +S L +F + S+I +I +F Sbjct: 136 MDGIRQAVSS-----------LMQKTAEFGVIIVNDIFQRLPGISTSLIIFVITAAYFTS 184 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + L + V IR G I+A+ G+ + L G+P Sbjct: 185 LLPVFKKNLWRFLPASGRERARSFLSEVYGDIRHFIAGQMIVALFVGVAVWLGMLLVGIP 244 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G ++A+ IP G ++ I L G + + L L P Sbjct: 245 YAMFIGFLSALTNFIPYMGIIVAAVPSLILGLSHGGLIGLLKVTLVLVAVNQFEGWVLSP 304 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G +KL + ++ +G++G+ I L+ W + +N Sbjct: 305 KIQGSRMKLNWFAIILAILLSGTLLGVVGILIAIPLVVFFKRFWIWYVQEALQN 358 >gi|152992436|ref|YP_001358157.1| hypothetical protein SUN_0842 [Sulfurovum sp. NBC37-1] gi|151424297|dbj|BAF71800.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 352 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 116/315 (36%), Gaps = 26/315 (8%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++ + + F V ++I+ P+++ SK L V+ +S++ Sbjct: 28 IFLLKAASAVIVPFLIAVAVSIILA----PLFTRLESKHIPKPVSLIVVILLSLLP---- 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ L Y + E + + ++ + + + H+ + +L Sbjct: 80 -IILLGGYVAEQAGEFAANYQSIKAN------FMQSLQAFIAQLGHYGIHIDDAKLNAVL 132 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + + + +F IFL + + + FM++ +FY ++ + + Sbjct: 133 EKSNIAGILKNLAAQANEQFSNIFLIFFM-VAFMLMESTYFY-------NKMMKIAKDY- 183 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + I+S F ++ + + W +P + V+ + IP Sbjct: 184 -QVDGNVMLELLEKIKSYFSIKVKTSLLTAVWAFTVLWYYEIPYYYLWAVLAFALNFIPV 242 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ ++ LI I + LW I +V L P ++G + L L F Sbjct: 243 IGSILAAIPAIVFALISHGIGTTLWVALWYVIINMVVGNILEPKIMGKGLGLSALVIFLS 302 Query: 316 LVGGVRTMGLLGLFI 330 + G G+ + Sbjct: 303 MTFWGWVFGPAGMIL 317 >gi|307244676|ref|ZP_07526779.1| membrane family protein [Peptostreptococcus stomatis DSM 17678] gi|306491927|gb|EFM63977.1| membrane family protein [Peptostreptococcus stomatis DSM 17678] Length = 371 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 68/172 (39%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + + R+ ++ F+G I AI G++ + + G P Sbjct: 200 QFARLFATFIPQPILDKFYYLLRVTDNTFKAFFIGQFIEAIILGVLCSTGLLILGFPYAF 259 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +G + + A+IP +++ N A L+ I + + P +VG Sbjct: 260 MIGSVVGVTALIPIIGAYLGGLFGFLMILSVNPLRAFAFLLFLIILQQLEGNLIYPKVVG 319 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I LP + F ++ G+ G+ +G ++A + I K+ + ++ E Sbjct: 320 SSIGLPGIWVFVAIIISGGLFGITGIILGVPIIASMYKILKDYVNKEQKALE 371 >gi|298711503|emb|CBJ26591.1| conserved unknown protein [Ectocarpus siliculosus] Length = 711 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 70/194 (36%), Gaps = 6/194 (3%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + FG + ++ + +F+ + + + + A K+ + + Sbjct: 313 ATLLASFGSFLIMVGFKVVLLFTCVFYMTSHDDFLERNIGDFLP-VSQADQKRAMKKLRG 371 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 I F +A G+V ++ + + + +++++P A I ++ Sbjct: 372 AIHGVFFMPCKVACLRGVVTLFSFKVLQIEFPFFAAFVAVLVSILPIVPAYIVCWPWALM 431 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ G L + + L ++D L G + T G G G+ Sbjct: 432 LVLHGRWV-GITLAISQHLILSVIDTELY---TQGVREANPYLTSLSCFLGYSVFGAHGV 487 Query: 329 FIGPVLMALIAVIW 342 +GP+++ L +I+ Sbjct: 488 LMGPLVLCLGTLIY 501 >gi|254422139|ref|ZP_05035857.1| hypothetical protein S7335_2289 [Synechococcus sp. PCC 7335] gi|196189628|gb|EDX84592.1| hypothetical protein S7335_2289 [Synechococcus sp. PCC 7335] Length = 238 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 1/208 (0%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + L LS++ I + D +++ L + + + Sbjct: 15 LALRSFTVTTDILGTLLSLVLAIFISGYMLADSSTLTTSFVRLFPQPWDQEIGQQLPEIG 74 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSI 267 I G I++ LV G G+ V LG I + +IP PI ++ Sbjct: 75 SRIGGYIRGRLIVSFTLALVTGVGLSFLGLKDFAVGLGAIAGVTNLIPFLGPILGAIPAL 134 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I + + L+ I L P LVG + + L ++GG + +G++G Sbjct: 135 IVAIPLGGWVVLWVILFYITIQNIETYILDPLLVGNSVGVHPLYQLLAVLGGTQVLGIIG 194 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEK 355 I P +A AV+ + + K EK Sbjct: 195 ALIVPPWVAGGAVLLENLYLKPKLKNEK 222 >gi|77457595|ref|YP_347100.1| hypothetical protein Pfl01_1368 [Pseudomonas fluorescens Pf0-1] gi|77381598|gb|ABA73111.1| putative permease protein [Pseudomonas fluorescens Pf0-1] Length = 356 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 112/349 (32%), Gaps = 18/349 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLA 63 + + ++ +++F+ ++ L G APVL+ +++ + + + + + + Sbjct: 15 DEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVVTLERLRVPGGAAVGLVF 74 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + +M +V L L++ + EL + + +P + + Sbjct: 75 ALFMGVLMVFIVVVLPLLWHQLITLFNELPGMLAKWQSLLLLLPERYPHLVSDEQVLQAI 134 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + F+ + ++ + ++ + I +FFF +D Sbjct: 135 EAARGEIGKF------------GQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDRAM 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + + A +++ + + I + G I + G V A+ G+ Sbjct: 183 IGEWVRGYLPR-ERALITRVAEEMNRQIANYIRGKVIEIVICGGVTYIAFVALGLNYSAL 241 Query: 244 LGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ + ++P + T I L G L I + L P L Sbjct: 242 LALLVGVSVVVPYVGAVVVTVPVLLIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPLLF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L + ++ G G+F L L + Sbjct: 302 SEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAWPRKEP 350 >gi|15837191|ref|NP_297879.1| permease [Xylella fastidiosa 9a5c] gi|9105453|gb|AAF83399.1|AE003904_20 permease [Xylella fastidiosa 9a5c] Length = 385 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 135/338 (39%), Gaps = 16/338 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ +L + L P + ++ +G+ + P+ + + V + + Sbjct: 19 YVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVE---WAGVSRAMAVCFVFFLVV 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQ 131 ++ L+ + + ++E +VV + W+ + IP + + P+ Sbjct: 76 LLLLLVLMIFVPLIE-----RQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPE 130 Query: 132 SLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + G + + SR G + + + +++ + I F+F RD +++ Sbjct: 131 QMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILSFYFLRDWDKWVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 191 AAIPRAYIGTVSRLVVEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLKLGLLIGLIAG 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +++ IP I+ +++ +I ++ + + + + L P +VG I Sbjct: 251 LISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + F ++ G + G +G+ + + A++ V+ + Sbjct: 311 GLHPVAVIFSVMAGGQLFGFVGMLLALPVAAVVNVLLR 348 >gi|296270262|ref|YP_003652894.1| hypothetical protein Tbis_2291 [Thermobispora bispora DSM 43833] gi|296093049|gb|ADG89001.1| protein of unknown function UPF0118 [Thermobispora bispora DSM 43833] Length = 407 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 101/321 (31%), Gaps = 15/321 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV A ++ +P+ + I + + + + + E Sbjct: 29 VLPVAIAFLLTALLYPLTKRLRDA-GLRPIYATWITMLLGLAVIVGVGFLIGNRANEEFP 87 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV ++ + WL + P + +++ + L + T Sbjct: 88 RLVEQL---QRTAAEAQHWLLNGPLQLKQAQITHIVDEIGKQLTEQRNEIVNTVLTG--- 141 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L+ S + ++ FF +DG I P + R Sbjct: 142 ------ATAVLEALASFVLVVFVTFFLLKDGDKIWAWFLKAFGDAAP-RVDRAGRAAWVT 194 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS-IYL 269 I G IA G+V+G+ + GVP V L V+ + + IP + ++ + Sbjct: 195 ICHYVQGTVAIAAIHGIVMGTVLAVMGVPLWVPLAVLIFLGSFIPIIGIVVTGGLATLVT 254 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L +A +E + + +P +VG I L L G G+ G Sbjct: 255 LGAQGWISALVFLAILVVEQQLENHLFQPQIVGRAIDFHPLAVILVLAVGGVIAGIPGAA 314 Query: 330 IGPVLMALIAVIWKESIMAIK 350 + L A++ E A + Sbjct: 315 VAVPLTAVLYRALPELFRAER 335 >gi|149374611|ref|ZP_01892385.1| hypothetical protein MDG893_11201 [Marinobacter algicola DG893] gi|149361314|gb|EDM49764.1| hypothetical protein MDG893_11201 [Marinobacter algicola DG893] Length = 387 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 97/310 (31%), Gaps = 8/310 (2%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI--VPLLFLFYYGMLEMKELVSKVV 97 I + P+ ++ K AV+ + + + +PL + ++ + + Sbjct: 62 ISYALEPLVAAINRLKVPRPLAAAVVLILLIGIIAGASIPLKQEAMAMLDKIPVAIEQFQ 121 Query: 98 LANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + + + + + + + I + + Sbjct: 122 KNEASRPKDGESMMEKAQSAAKKIEATASPDRDNGDASQSGATPVRVVDEPLEIKDYVLQ 181 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVPKVIRS 213 L ++ ++F G +++ + F K +I + +R Sbjct: 182 GSPAALVLISQCFSALLLVYFVLAIGSLYRRKIVKISGPSFARMRKAARIMNEFHRSVRQ 241 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK 272 M + A+ G++ ++ GV GV+ I + +P G + + I+ Sbjct: 242 FLFVMFVGAVFVGVLTWLSFMALGVEQAGFWGVLAGIASAVPYLGPFLVLMGTGMAAFIQ 301 Query: 273 -GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G + + + I L P+L L + F GL+ G +GL + Sbjct: 302 FGELEMSIIVAGTSLAITSIQGYLLTPWLTSHISSLNAVAIFIGLLFWGWLWGPVGLVVA 361 Query: 332 PVLMALIAVI 341 ++ ++ + Sbjct: 362 TPILMIVKSL 371 >gi|309775840|ref|ZP_07670834.1| sporulation integral membrane protein YtvI [Erysipelotrichaceae bacterium 3_1_53] gi|308916378|gb|EFP62124.1| sporulation integral membrane protein YtvI [Erysipelotrichaceae bacterium 3_1_53] Length = 358 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 107/337 (31%), Gaps = 17/337 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESS 59 T I+ ++ + II+ LY + P L +I F P+ + Sbjct: 3 TEKQRAFIIHFVYICIIITLLYVFLRYVMYAIMPFLIGFLIAFMLRPLIKKLTAMSGGHE 62 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + I + V + L G +K+ V + Q + +L+D G Sbjct: 63 RLWSTIVILLFYTTIGVFVTLLSMKGFAFLKDFVENIPRLYQENLEP--FLNDTLGN--V 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI---IFMIIALFF 176 +W + L+++ I + +F S+ + Sbjct: 119 ESVWKEVDITSAQAIQSFLDGLQSSLYSIISSISKSLVSMFTGAAASLPNLVISFFFAII 178 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKI----SRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + Q++ S P +I I S L I + L L Sbjct: 179 SSFFFNADYQRIISFIIRQLPEKGAQIVFTARHYFTDTIASFALAYEKIMLLTFLELTIG 238 Query: 233 YWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 ++ G+ + + + + AI ++P G + + I + L + + + + Sbjct: 239 LYVLGIENALVIAFLIAIFDVLPVLGTGGIMIPWILICFLNNQIKTSVGLLILY-LVITV 297 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + P +VG I L L + G + G LG+ Sbjct: 298 IRNIIEPKIVGKQIGLHPLLMLLCMYLGAKLFGFLGI 334 >gi|28199441|ref|NP_779755.1| permease [Xylella fastidiosa Temecula1] gi|182682169|ref|YP_001830329.1| hypothetical protein XfasM23_1648 [Xylella fastidiosa M23] gi|28057556|gb|AAO29404.1| permease [Xylella fastidiosa Temecula1] gi|182632279|gb|ACB93055.1| protein of unknown function UPF0118 [Xylella fastidiosa M23] gi|307578438|gb|ADN62407.1| hypothetical protein XFLM_02030 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 385 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 140/348 (40%), Gaps = 16/348 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ +L + L P + ++ +G+ + P+ S +AV ++ L Sbjct: 19 YVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVE--WVGVSRAMAVCFVFFLVVL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQ 131 +V +L +F + +VV + W+ + IP + + P+ Sbjct: 77 LLVLVLMIFVPLIE------RQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPE 130 Query: 132 SLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + G + + SR G + + + +++ + I F+F RD +++ Sbjct: 131 QMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILSFYFLRDWDKWVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + +++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 191 AAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLRLGLLIGLIAG 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +++ IP I+ +++ +I ++ + + + + L P +VG I Sbjct: 251 LISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G +G+ + + A++ V+ + + E++ Sbjct: 311 GLHPVAVIFSVMAGGQLFGFVGMLLALPVAAVVNVLLRYAHERYIESE 358 >gi|193068845|ref|ZP_03049805.1| putative membrane protein [Escherichia coli E110019] gi|193071500|ref|ZP_03052411.1| putative membrane protein [Escherichia coli E110019] gi|192955177|gb|EDV85669.1| putative membrane protein [Escherichia coli E110019] gi|192957921|gb|EDV88364.1| putative membrane protein [Escherichia coli E110019] Length = 353 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 119/338 (35%), Gaps = 29/338 (8%) Query: 1 MRETMLNPQ-------GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS 53 M M PQ +++ + +IL ++ +L AL P+ + FI Sbjct: 1 METPMETPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIR 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + +A V+ + ++ L L E +S + N+ Sbjct: 61 RGVQRP-----VAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKE----------- 104 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + + + +L + E L+ + + F + S++ +++ Sbjct: 105 ---LTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMT 161 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + F + + ++ + + + R + V L + ++ G+++ Sbjct: 162 VVFMLFEVRHVPYKM-RFALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGL 219 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L GV + V+ ++ +P GA IS I +L+ ++ + + ++ Sbjct: 220 ELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVI 279 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L P ++G + + + F L+ +G +G+ + Sbjct: 280 GNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLL 317 >gi|225420000|ref|ZP_03762303.1| hypothetical protein CLOSTASPAR_06341 [Clostridium asparagiforme DSM 15981] gi|225041351|gb|EEG51597.1| hypothetical protein CLOSTASPAR_06341 [Clostridium asparagiforme DSM 15981] Length = 413 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 123/361 (34%), Gaps = 35/361 (9%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF----------LA----- 63 ++ + L P++ ++ + P+Y+ E+ + A Sbjct: 35 MVAAAAGKLVDVLMPIIYGAVLAYLMLPVYNKTRRYVTENLSVKVKNEKMVQSAARGLGT 94 Query: 64 ------VIATVSVMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGG 116 +IA V +C ++P ++ G+ E E ++ + + Q + L + Sbjct: 95 LVSLLLLIAIVVGLCWMLLPQIYTSILGLQESFSENINNLSIWLQKQLADNEALEQM--- 151 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 ++ + ++ + + I+ + + + + +I M+ F Sbjct: 152 --VVPVYEQVTDKLETWLYDTLVPNMSMVINILSTGLLGVVTVLKNSLIGLIVMVY--FL 207 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +D ++S Q + LFP + R V G + ++ G++ Sbjct: 208 NIKD--TLSAQSKKIVYSLFPLKQANRIIEEVRFTHSVFGGFITGKLLDSLIIGVICFFC 265 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L +P + + VI + +IP P S +L++ + L+ + Sbjct: 266 MRLLRMPYVLLVSVIIGVTNVIPFFGPFIGAIPSAFLILLVSPMKCLYFLLFVLVLQQFD 325 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L P ++G LP F ++ +G +G+ I A+ + E + E Sbjct: 326 GNILGPKILGESTGLPSFWVLFSILLFGGLLGFVGMVIAVPTFAVFYHLASEYVNRCLEK 385 Query: 353 K 353 K Sbjct: 386 K 386 >gi|188989483|ref|YP_001901493.1| hypothetical protein xccb100_0087 [Xanthomonas campestris pv. campestris str. B100] gi|167731243|emb|CAP49417.1| conserved hypothetical membrane protein [Xanthomonas campestris pv. campestris] Length = 346 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 91/313 (29%), Gaps = 23/313 (7%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 V A+++ + S S + V V F L E+ L Sbjct: 36 VFGAVVVAVLLRALASWVTRYTPLSDGTALGLVVVVVAVGFTALLWLFGSQLATELGALQ 95 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + Q W++ P G EL +N FA Sbjct: 96 RTLP---QAWARFHDWVAAGPLGPALEEL------------TRQAPARVSNLAPRAGAFA 140 Query: 154 SRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + YR G + L A R + Sbjct: 141 LSITGGVANLFLVLAGAVYLAAQPQLYRRG------VLLLFPVQVRATMDDAVRASGTAL 194 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R G + + G + G W G+P +ALG+I ++ +P PI +I L Sbjct: 195 RLWLRGQLLAMVVVGALTGLGLWALGIPGALALGIIAGLLDFVPIVGPILAAIPAILLGF 254 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + A + I L P + + LP + F L G +G G+ + Sbjct: 255 TVSPQMALATAALFVVVQQIEGNILLPLIQQRTVDLPPVLLLFSLFGIGTLLGPAGVLLA 314 Query: 332 PVLMALIAVIWKE 344 L + V+ K Sbjct: 315 APLTVVAFVLVKR 327 >gi|325206005|gb|ADZ01458.1| putative membrane protein [Neisseria meningitidis M04-240196] Length = 356 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|323486620|ref|ZP_08091941.1| membrane protein [Clostridium symbiosum WAL-14163] gi|323692237|ref|ZP_08106479.1| hypothetical protein HMPREF9475_01342 [Clostridium symbiosum WAL-14673] gi|323400001|gb|EGA92378.1| membrane protein [Clostridium symbiosum WAL-14163] gi|323503699|gb|EGB19519.1| hypothetical protein HMPREF9475_01342 [Clostridium symbiosum WAL-14673] Length = 414 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 125/354 (35%), Gaps = 25/354 (7%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVMC 72 ++ + G AP++ ++ + + PIY+ + + T + Sbjct: 40 IHMIIGIVAPIIYGAVLAYLTTPIYNRVTKAVKLKLLKVWKDEKHVTGLAKAAGTFVSVS 99 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQ 131 L +V + LF + +M E + + + + + W+ + E LS+ Q Sbjct: 100 LVLVIVAGLFQMLIPQMIESLMGIRDSFPTYLQNLYAWIQQVLADNPDIE--AMVLSNLQ 157 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMIIALFFFYRDGFSI 184 + ++E++L+ + + F + + + +I + + ++ Sbjct: 158 NSVTMAESWLEKSFTNIDMTRLGEFLTGVSSSVLSLLVFIKNWLIGLIVMVYLLNIKDTL 217 Query: 185 SQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S Q + W + R V ++ +G + ++ G++ L +P Sbjct: 218 SAQGKKIIYSCMNLKWANNVIEELRFVNQMFGGFIIGKLVDSLIIGIICFIGTSLMKMPF 277 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + VI + +IP P + +L++ + ++ + L P + Sbjct: 278 TLLISVIIGVTNIIPFFGPFIGAIPTGFLVLLVSPVKCIYFLIFILLLQQFDGNILGPKI 337 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G L F ++ G +G+ I A+I + ++ +NK+ Sbjct: 338 LGDSTGLSSFWVLFSILLFGGLFGFVGMIIAVPAFAVIYDLIARAVHFSLKNKK 391 >gi|299139198|ref|ZP_07032374.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX8] gi|298598878|gb|EFI55040.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX8] Length = 355 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 113/355 (31%), Gaps = 17/355 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEES 58 MRE+ I+ + + I L + L V + + P+ + + S Sbjct: 1 MRESRATRSNILFFFAVLIALGLAWKLLNVLELVYVSALFAVVLMPVVQQIMRVRIRGWS 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + I + LF + L + + +V + R+ +D+P + Sbjct: 61 PSRPIAIVVLLGTVLFALTLFLIVG-----LPPVVHDIQ----------RFAADLPKRIP 105 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L L + S + + + +++ L I+ I +F Sbjct: 106 DLVARLHKLPMADKLGVDSLAQRSEDLASSVATYLLASLPLWMKRILDIVTAFILCIYFM 165 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +G S K + LG + + G+ + V Sbjct: 166 LEGEYAYYYFLSFFTASERTRLAKTLITAEHRMSKWLLGQGALMLILGITSTCVFGALHV 225 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 V LGV+ + +IP + + + + +F++ AI + + + L P Sbjct: 226 RYFVLLGVLMGLFNIIPVAGGVITILLVASVAALDSWSKMLGVFIFYAIYVQLENGFLTP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ + L L L+ G G+ G + ALIAV+ E + + Sbjct: 286 RIMKTSVNLMGLSVLVALLAGTALAGIPGALVSVPTAALIAVLMDEYFVKADGEQ 340 >gi|295703106|ref|YP_003596181.1| hypothetical protein BMD_0970 [Bacillus megaterium DSM 319] gi|294800765|gb|ADF37831.1| putative membrane protein [Bacillus megaterium DSM 319] Length = 344 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 116/333 (34%), Gaps = 25/333 (7%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +L I F + K +ST + ++ ++++ + M Sbjct: 29 IRSMLQLLLFTFIFTFLIGRFQQTLRRKLPLNSTLILIVIYIALIGALGIVGYVYIPVIM 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ELV K++ +H P +++ I +LK I Sbjct: 89 TQVTELVQKLMYFYKH-PPDNTFVTYI----------------IDNLKRFKSPENIQQNI 131 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK---I 203 D + + S G + L+++ + L + I + L + ++K+ + Sbjct: 132 DLVYSYLSNIGKVSAQVFLALLLSLFFL----LEKSRIHRLFVQLEQSRLGWFFKEAGYL 187 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 R IIA ++ A W+ G P+ +ALGV+ ++ ++P G +S Sbjct: 188 GRKFVNSFGKVIEVQFIIAFVNSILSVIALWVLGFPNLLALGVMVFLLGLVPVLGVFVSL 247 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + G + + + + L P L+ LP TF LV G Sbjct: 248 IPLCTIAYSLGGGVKVLSVLIMVVVLHALESYVLNPKLMSSKTNLPTFITFIILVFGEHF 307 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ GL +G + + KE+ Sbjct: 308 LGVWGLILGIPIFIFFLDLVGVDSAQQLSKKEE 340 >gi|225012985|ref|ZP_03703402.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-2A] gi|225002884|gb|EEG40863.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-2A] Length = 362 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 116/326 (35%), Gaps = 18/326 (5%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A +I PI FI + + + ++ L I + + + L Sbjct: 37 MIIAGVISLIGRPINQFFIKRLHFKNILATSLTLFILLGLLISVFSLFVPLLIQQGENL- 95 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ + +I ++ + + ++ + + +P Sbjct: 96 -SLLDVESLKKTTETLIQEI-------SIYFQVDNSFWQQQLAVDNLFQNVNFGLLPELL 147 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 ++ + + + + ++ LFFF +D + +L +K +++ Sbjct: 148 NQILELLGGFTIGLFSVLFILFFFLKDSHLQDSIILTLVNDKITDRVEKSIEKTKRLLSR 207 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK- 272 FLG+ + ++ + V + + + A++ +IP PI + + L + Sbjct: 208 YFLGLLLQISILLIIYSIVLAVFKVENAFIIAFLCALLNLIPYLGPIIGGLLMMTLTMSS 267 Query: 273 --GNIFNATCL-----FLWGAIELFIVDKTL-RPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 G F++ L + G + ++D +PF+ +K L F ++ +G Sbjct: 268 FIGADFSSVILPKTSYVMIGFVIGQLIDNFFSQPFIFSNSVKSHPLEIFIVILASGTLLG 327 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 +G+ I L + VI +E + K Sbjct: 328 PVGMIIAIPLYTTLKVISQEFLAENK 353 >gi|121634907|ref|YP_975152.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|269214955|ref|ZP_05987479.2| putative membrane protein [Neisseria lactamica ATCC 23970] gi|304387523|ref|ZP_07369712.1| possible permease [Neisseria meningitidis ATCC 13091] gi|120866613|emb|CAM10364.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|269208647|gb|EEZ75102.1| putative membrane protein [Neisseria lactamica ATCC 23970] gi|304338410|gb|EFM04531.1| possible permease [Neisseria meningitidis ATCC 13091] gi|325132218|gb|EGC54912.1| putative membrane protein [Neisseria meningitidis M6190] gi|325138201|gb|EGC60771.1| putative membrane protein [Neisseria meningitidis ES14902] Length = 356 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|24114734|ref|NP_709244.1| hypothetical protein SF3492 [Shigella flexneri 2a str. 301] gi|30065249|ref|NP_839420.1| hypothetical protein S4271 [Shigella flexneri 2a str. 2457T] gi|110807301|ref|YP_690821.1| hypothetical protein SFV_3477 [Shigella flexneri 5 str. 8401] gi|187730420|ref|YP_001882139.1| hypothetical protein SbBS512_E3848 [Shigella boydii CDC 3083-94] gi|218707069|ref|YP_002414588.1| hypothetical protein ECUMN_3937 [Escherichia coli UMN026] gi|293407056|ref|ZP_06650980.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382802|ref|ZP_06992397.1| inner membrane protein yhhT [Escherichia coli FVEC1302] gi|24053951|gb|AAN44951.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30043511|gb|AAP19231.1| hypothetical protein S4271 [Shigella flexneri 2a str. 2457T] gi|110616849|gb|ABF05516.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|187427412|gb|ACD06686.1| putative membrane protein [Shigella boydii CDC 3083-94] gi|218434166|emb|CAR15083.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|281602822|gb|ADA75806.1| hypothetical protein SFxv_3808 [Shigella flexneri 2002017] gi|284923465|emb|CBG36560.1| putative membrane protein [Escherichia coli 042] gi|291425867|gb|EFE98901.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298276638|gb|EFI18156.1| inner membrane protein yhhT [Escherichia coli FVEC1302] gi|320175695|gb|EFW50783.1| putative PerM family permease [Shigella dysenteriae CDC 74-1112] Length = 349 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|319934911|ref|ZP_08009356.1| hypothetical protein HMPREF9488_00187 [Coprobacillus sp. 29_1] gi|319810288|gb|EFW06650.1| hypothetical protein HMPREF9488_00187 [Coprobacillus sp. 29_1] Length = 393 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 69/213 (32%), Gaps = 1/213 (0%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S S L GI+ I + FG F++ S I + L + + + Sbjct: 153 DLNSFLSKSGDLLGNAGINLIFQSIGIFGT-FINAITSFIMALYLLANKETHLRQLKKIV 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + I G + ++ + + ++G+P L I Sbjct: 212 TFFFGYKESLVIFDIGAEANHYFNGFVSGQLLECCILTSLMYAGFKISGMPFPELLAFII 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +++P +S L++ A L I + P +VGG + + Sbjct: 272 GIASLVPMFGGFVGFGISFVLVLAVEPTQAIIFTLCFVIIQQFEANIIYPRVVGGAVGIS 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + LV +G GL I MALI + Sbjct: 332 GVYVLLSLVIFGNLLGFFGLLIAVPSMALIYAV 364 >gi|295687537|ref|YP_003591230.1| hypothetical protein Cseg_0085 [Caulobacter segnis ATCC 21756] gi|295429440|gb|ADG08612.1| protein of unknown function UPF0118 [Caulobacter segnis ATCC 21756] Length = 366 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 43/350 (12%), Positives = 113/350 (32%), Gaps = 31/350 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVS---LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR +P +++ ++ S LY+++ P+ A+ + ++ Sbjct: 1 MRAPASSPSTTRNAVVLLAVIASGAALYWMQDILTPLALAVFLAVMVDSFARVLTARVPG 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A+ A V + L ++ + + ++ + L+ Sbjct: 61 FPARAALPAAVVISILLFGVSFWVV---IENGRGFFDQLKDYAPRLNDIIAKLAH----- 112 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIP-RFASRFGMIFLDYCLSIIFMIIALFF 176 ++ I + + P R+ + F ++ S + ++I L F Sbjct: 113 --------------AVGIHVAPTIGGLINELNPQRYIGQAAQSFGNFASSAVLVLIYLGF 158 Query: 177 FYRDGFSISQQLDSLGE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 ++++ SL H K+ + + + T+ + + + L Sbjct: 159 IIASRRGFARKIVSLFPQHAEREQNMKLFQRIRDGVEQYLWIQTVTGLMIAVAAWAVMML 218 Query: 236 AGVPSHVALGVITAIMAMIPGGAPIS---FTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + + + + A IP + + +++ A LF F+V Sbjct: 219 VRLDNAFFWAFLIFLAAYIPILGGAIGCFLPPLFALVQFPESLWPAIILFCALQGIFFVV 278 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + P + G + + L G+ G+F+ P+ +A++ ++ Sbjct: 279 GNVILPRMQGDSLNMDPTVVLLSLAVWGALWGVPGMFLSTPLTVAVMLIL 328 >gi|298490663|ref|YP_003720840.1| hypothetical protein Aazo_1509 ['Nostoc azollae' 0708] gi|298232581|gb|ADI63717.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 365 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 117/341 (34%), Gaps = 18/341 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +++ + + + + + A+++ F +PI F K+ V + + + Sbjct: 26 LVIQVIQYFQPLVSVISVAILLAFVLDYPI--KFFHKRGVPRNLAIVGVLLIAVVILGAV 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L ++ ELV+ + + G + + P ++ L+ Sbjct: 84 GVILVPLIFQQLNELVNILPVWIDSGTKQLQVFLN---------WAATQQDLPVNISGLA 134 Query: 138 ETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L+ F F + + ++++ ++ + +G + + Sbjct: 135 TQLLERISSQFQSFTGKILSFAFDTIGFLVNLLLAVVLTIYLTLNGEKLWSGIYQWFPSN 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ ++ + ++ F+G + + + A+ +P + G+ I ++ P Sbjct: 195 IS---TKVRELLKEDFQNYFIGQATLGAILAVTVTLAFVALRIPLALLFGIGIGIFSLFP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G I VS+ L+ N + + I + P ++G L + Sbjct: 252 FGTGIGIGIVSL-LVALENFWEGVEVAAIAVTIDQINSNIVAPRILGNLTGLNPVWVVIS 310 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ G + G+LGL + + + I I E++ Sbjct: 311 LLIGAKLGGVLGLLVAIPIASFIKDIADSWRAGELRRVEEV 351 >gi|297196905|ref|ZP_06914302.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197715967|gb|EDY60001.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 416 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 1/181 (0%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ + A ++ + + + FF G L + + Sbjct: 199 SDHRSVLISSAVSGAGRLVEVLTAGVLALFCSLFFVHSGDRFWSWFQELLPQRARDPFSR 258 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 R + G+ I+A +++G A ++ VP + L ++ A IP G+PI+ Sbjct: 259 AGRTAWRTFAGYTRGIVIVAASNAVLVGVALFVLRVPLALPLTMLEFFAAFIPLVGSPIA 318 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L A + I I L P ++ ++L + ++ G Sbjct: 319 LGVATVVALASRGPAIAIVVLALIVIIGQIEGHVLHPLVMSWAVQLHPVIVAVSVIAGAI 378 Query: 322 T 322 Sbjct: 379 L 379 >gi|319410469|emb|CBY90829.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] Length = 356 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|218556025|ref|YP_002388938.1| hypothetical protein ECIAI1_3621 [Escherichia coli IAI1] gi|293453779|ref|ZP_06664198.1| UPF0118 inner membrane protein yhhT [Escherichia coli B088] gi|331670300|ref|ZP_08371139.1| putative membrane protein [Escherichia coli TA271] gi|218362793|emb|CAR00419.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|291321905|gb|EFE61336.1| UPF0118 inner membrane protein yhhT [Escherichia coli B088] gi|331062362|gb|EGI34282.1| putative membrane protein [Escherichia coli TA271] Length = 349 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLITLTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|256826100|ref|YP_003150060.1| putative permease [Kytococcus sedentarius DSM 20547] gi|256689493|gb|ACV07295.1| predicted permease [Kytococcus sedentarius DSM 20547] Length = 398 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 105/315 (33%), Gaps = 21/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + II + G P+ AL + T++P+ + K +AT++ + Sbjct: 40 LVIIGAGIRSQAGMLGPMFLALTLVITAYPMVTWMRRHKVPGP-----LATLASLLAIYA 94 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + + + LV +P ++ G + L+ + Sbjct: 95 VLAAIAWSMVWSVLRLVE----------VMPEYVEQ---GTQLYDQTISQLARYGVEESQ 141 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E L + + ++I L F D S+ ++ L + Sbjct: 142 LEDLLTNVEPGQVAGVVRNLAGQLSGGASLLTLLVIGLIFLVLDTGSMEARMRVLADQ-- 199 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + +RS +L T+ I LV W G+P + GV + + IP Sbjct: 200 RPGAAAAFGDFARRVRSYWLVTTVFGILVALVDVVFLWALGIPLAITWGVFSFVTNYIPN 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + ++ L++ F A + + F+ ++P + G + L F Sbjct: 260 VGFVLGLIPPTLIALLEKGPFIAVVVAVGYWAINFVFQTIIQPRVTGDMVGLNATVIFVS 319 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G LG + Sbjct: 320 LIVWAYLLGPLGALV 334 >gi|325202087|gb|ADY97541.1| putative membrane protein [Neisseria meningitidis M01-240149] gi|325208159|gb|ADZ03611.1| putative membrane protein [Neisseria meningitidis NZ-05/33] Length = 356 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 127/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLIFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLISFMQNTLLPWLKNTIGG------YMEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|293416878|ref|ZP_06659515.1| inner membrane protein yhhT [Escherichia coli B185] gi|291431454|gb|EFF04439.1| inner membrane protein yhhT [Escherichia coli B185] Length = 349 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLITLTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVIFLSLLIWGWLLGPVGMLL 313 >gi|262198519|ref|YP_003269728.1| hypothetical protein Hoch_5351 [Haliangium ochraceum DSM 14365] gi|262081866|gb|ACY17835.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 364 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 101/338 (29%), Gaps = 13/338 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + +++ +L + + +++ + + + ++ LF + Sbjct: 23 VVVAYLAIGYLSQVVLVIFAGVLLAVFLDGLTRLLCRHTPLPRWLSLTLVCLGLVALFAL 82 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 G +++ ++V ++ L G ++ P + Sbjct: 83 -------AGWQSGEKIGAQVRELSERIPVALERLRSWVDGYDWAQPVVTQFDKPTEVMSK 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 G D I R F + L +I ++ + + L Sbjct: 136 VAP-----GADMIGRITGVF-SVVLGAATNIFIVLFLGIYLAASPGLYVGGVAWLAPAPK 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +++ + + +R G G+ +AGVP LGVI ++ IP Sbjct: 190 RERTRQVLAQLGRALRRWLGGRFASMAVVGVFTAVGLLIAGVPLAFILGVIAGALSFIPY 249 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 PI + + + + + + P + + +P Sbjct: 250 IGPILSVVPGLLMALTIGPQTVLFALMVYFAAQLLESYLITPLIQRRVVSMPPAVLIMAQ 309 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + GLLG+ + L ++ V+ + + ++ Sbjct: 310 MIMGVVAGLLGVLLATPLAVVVIVLVQMLYLQDVRGED 347 >gi|254465372|ref|ZP_05078783.1| membrane protein [Rhodobacterales bacterium Y4I] gi|206686280|gb|EDZ46762.1| membrane protein [Rhodobacterales bacterium Y4I] Length = 357 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 118/330 (35%), Gaps = 18/330 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA--TVSVMCLF 74 V ++ L P + I + PI + + A I T+ V L Sbjct: 16 ALAFAVVMWSLGHVLLPFILGAAIAYMIDPIADRLEAWGMSRAGATATITVGTLVVFVLL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ ++ Y M+++ ++ K++ ++ + P + ++ Sbjct: 76 LLVVVPTLIYQMIDLANVLPKLIGDARNFVN-----ERFPAVFEQDSRIHQAITA----- 125 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L++ + + A + L +I ++A++ D + ++D L Sbjct: 126 --LAETLQSRAVQVLQSVAGSAVSLLNVVVLLVIVPVVAVYMLL-DWDRMIARIDELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + + S GM + + G A L G+ +A+G I ++ I Sbjct: 183 DHQPVIRRLAGDIDAALASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L + G+ + + L + + L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWVSIGLVALIFVVGQVVEGNFLTPKLVGDSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G +G+ I + A + VI Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVI 332 >gi|299783257|gb|ADJ41255.1| Permease [Lactobacillus fermentum CECT 5716] Length = 366 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 117/331 (35%), Gaps = 15/331 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----KEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P+L +I + + + K + + A + + + L IV ++ + + Sbjct: 41 MPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLSIVVVIGVVSSVV 100 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 K++ + Q + +P++++ + + LW + + + L Sbjct: 101 APQLVACVKLLFSGQSKV-IPQFINWLENESFLKSLWQQIDLSKINWTKVQSYLLNGASG 159 Query: 147 DF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F + AS+ ++I F I L F ++ Q L P +I Sbjct: 160 TFSTVMSTASKVVSALTTTVVAIFFSIYLLLFK----DRLACQFRLLLTTYLPGQVARIL 215 Query: 205 RI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 R+ + S +G A+ G + +P +G + A+ A++P + Sbjct: 216 RVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTALVPIIGALM 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +V I ++ + A + ++ P +VG I LP + F ++ G Sbjct: 276 GASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVFVAVMVGGG 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+LG+ L A + K + + N Sbjct: 336 VSGILGMMFTVPLFAAFYQLLKTDVAKRQLN 366 >gi|254410689|ref|ZP_05024468.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196182895|gb|EDX77880.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 367 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 97/264 (36%), Gaps = 10/264 (3%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFA 153 + A Q +P W + + + L+ P SL L + I + Sbjct: 95 ITQAQQLVSRLPEWFDSGRRQLIMLDHRLEDLNLPISLDGLIIQINDRLKGQLQVIASKS 154 Query: 154 SRFGMIFLDY----CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + L ++ +II+ F+ + G + + L + R+ Sbjct: 155 LNLTLNLAVFTVTKVLDVLLIIISTFYLLQHGREVWRSLIEWLPNKVQRSASNTLRL--- 211 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ F+G IIA L S + L VP + G +MA++P G + V++ + Sbjct: 212 SFQNYFIGQIIIATCMASGLISLFILLKVPFGLLFGFTIGVMALVPFGGSVGIALVTLLV 271 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ +I + + +V+ L P + G L F L+ GVR GLLG+ Sbjct: 272 ALR-DIGLGVQVLAVAVVFQQLVENLLAPRIFGRVTGLNPFWVFISLLIGVRVGGLLGVI 330 Query: 330 IGPVLMALIAVIWKESIMAIKENK 353 + +I E A K+ Sbjct: 331 VAVPTAVVIKEALVEVRKARKDRN 354 >gi|218550737|ref|YP_002384528.1| hypothetical protein EFER_3448 [Escherichia fergusonii ATCC 35469] gi|218358278|emb|CAQ90925.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324111795|gb|EGC05775.1| hypothetical protein ERIG_03542 [Escherichia fergusonii B253] gi|325499023|gb|EGC96882.1| hypothetical protein ECD227_3120 [Escherichia fergusonii ECD227] Length = 349 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHISPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + I ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLIVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLVWGWLLGPVGMLL 313 >gi|159039525|ref|YP_001538778.1| hypothetical protein Sare_3997 [Salinispora arenicola CNS-205] gi|157918360|gb|ABV99787.1| protein of unknown function UPF0118 [Salinispora arenicola CNS-205] Length = 413 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 7/259 (2%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 V +NQ P ++ + +EL ++ + + L + Sbjct: 161 VTQSNQFIEQFPNYVESLRRNETINELVERYDLMERIERAADTDTLGHALGGVLGGAQLI 220 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 FG F + ++ + +F + +L + I + + + Sbjct: 221 FGTAFRTLTVLVLTVYFLAYF-----NRLRSLGYALVPRSRRDRVRLIGDEIIMKVGAYI 275 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 +G IIA+ G +A +P AL V+ A+ +IP GA + VS+ + Sbjct: 276 VGALIIAVLAGTTTFVFAVIAELPYPFALAVVVAVADLIPQIGATLGAVIVSLVGFAT-D 334 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + ++ I + + + P ++ +++ + + GV +G++G FI Sbjct: 335 LPVGIACVVFFLIYQQLENYLIYPKVMRRSVQVNEVAALVAALLGVALIGVVGAFIAIPT 394 Query: 335 MALIAVIWKESIMAIKENK 353 +A +I +E I+ ++++ Sbjct: 395 VAAFQLILREVIVPRQDSR 413 >gi|296533359|ref|ZP_06895959.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] gi|296266314|gb|EFH12339.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] Length = 642 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 4/175 (2%) Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I +I+ +F + + +L L + FL I +G G Sbjct: 193 IVLIVTIFVLLQR-EDLRDRLIRLFGSTDLHRTTIAMDDAAYRLSRFFLAQLCINLGFGA 251 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWG 285 ++G + GVPS + G++ A++ +P I + I L + + L Sbjct: 252 IIGLGLLVIGVPSPLLWGLVAALLRFVPFIGGILGAVLPIGLAASVDPGWSMALWTAALF 311 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 I + P G + + + G +GL I PV + L+ Sbjct: 312 LAVEPIAAHVVEPLTYGHSTGMSPVSVIIAAIFWSWIWGPIGLLIATPVTLCLVV 366 >gi|21229557|ref|NP_635474.1| hypothetical protein XCC0079 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766430|ref|YP_241192.1| hypothetical protein XC_0080 [Xanthomonas campestris pv. campestris str. 8004] gi|21111025|gb|AAM39398.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571762|gb|AAY47172.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 346 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 91/313 (29%), Gaps = 23/313 (7%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 V A+++ + S S + V V F L E+ L Sbjct: 36 VFGAVVVAVLLRALASWVTRYTPLSDGMALGLVVVVVAVGFTALLWLFGSQLATELGALQ 95 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + Q W++ P G EL +N FA Sbjct: 96 RTLP---QAWARFHDWVAAGPLGPALEEL------------TRQAPARVSNLAPRAGAFA 140 Query: 154 SRFGMIFLDYCLSIIFMIIALF--FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + YR G + L A R + Sbjct: 141 LSITGGVANLFLVLAGAVYLAAQPQLYRRG------VLLLFPVQVRATMDDAVRASGTAL 194 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R G + + G + G W G+P +ALG+I ++ +P PI +I L Sbjct: 195 RLWLRGQLLAMVVVGALTGLGLWALGIPGALALGIIAGLLDFVPIVGPILAAIPAILLGF 254 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + A + I L P + + LP + F L G +G G+ + Sbjct: 255 TVSPQMALATAALFVVVQQIEGNILLPLIQQRTVDLPPVLLLFSLFGIGTLLGPAGVLLA 314 Query: 332 PVLMALIAVIWKE 344 L + V+ K Sbjct: 315 APLTVVAFVLVKR 327 >gi|167747114|ref|ZP_02419241.1| hypothetical protein ANACAC_01827 [Anaerostipes caccae DSM 14662] gi|317471931|ref|ZP_07931265.1| hypothetical protein HMPREF1011_01614 [Anaerostipes sp. 3_2_56FAA] gi|167654074|gb|EDR98203.1| hypothetical protein ANACAC_01827 [Anaerostipes caccae DSM 14662] gi|316900597|gb|EFV22577.1| hypothetical protein HMPREF1011_01614 [Anaerostipes sp. 3_2_56FAA] Length = 379 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 110/332 (33%), Gaps = 6/332 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F A II + SK ++ L++I ++++C+ V L F Sbjct: 41 VIFPFIIGGCMAFIINVPMRFFETKLFSKVKKGKRALSLI--LAILCIIGVLALISFLIL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-WTKHLSHPQSLKILSETFLKTN 144 L S + +L ++ ++ K + F +T+ Sbjct: 99 PELANTLYSLASSIPGFVNEIKDFLQNVSDNPLLTKQNLMKIDLDWNKISTELMGFFQTS 158 Query: 145 GIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + S + + L +F + AL + + L S + + Sbjct: 159 ASNILGSTVSVISSAVQTVVTFLLGTVFAVNALLKKEKLVLQTKKLLYSYLKESYADRIV 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + + S G A+ G ++ + + +P + + + + ++IP Sbjct: 219 YIGNMCNQAFSSFLSGQCTEAVILGTIIFISMNILRLPYAMLIAMFIGVTSLIPILGGFI 278 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + L+ + F + + I + P +VG + LP + + G Sbjct: 279 GSTLGAILIFMVSPFKMVIFVIMFVVVQQIEGNLIYPHVVGNSVGLPAIWVLVAVTVGGN 338 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G+FI ++I + + + K Sbjct: 339 LAGVAGMFISIPACSVIYALLRNAANERLRKK 370 >gi|299065816|emb|CBJ36994.1| putative permease transmembrane transport protein (perM) [Ralstonia solanacearum CMR15] Length = 356 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 99/315 (31%), Gaps = 8/315 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P + A I+ + P + + + +M + + +L + E+ Sbjct: 35 TPFVFAGILSYILHPGVEWLQRHRVPR-VLGVFLMILLLMVVAMALMLLILAVLQREIPA 93 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + ++ P + L + + Sbjct: 94 IREQLPGMLSKLNAAIT-----PRLAEMGLHVRFDFPGLRKLLTEQLAASPEDVMSTALN 148 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + G + + + I +F+ D + ++L+ + ++++ ++ Sbjct: 149 YLRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLIRRLEGTVPRRWIGKTRELAAETDGLL 208 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYL 269 G I+ + + LAG + +G+ T + IP A+ L Sbjct: 209 SQYLRGQIIVMLVLAAYYSTGLALAGFDVALPIGIFTGLAVFIPYIGFGIGLILAILSAL 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L GN++ + + + + L P LVG I L L L+ + G G+ Sbjct: 269 LQFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGERIGLHPLAVILALLAFGQLFGFFGIL 328 Query: 330 IGPVLMALIAVIWKE 344 + + A++ V ++ Sbjct: 329 LALPISAVLLVGLRQ 343 >gi|161870063|ref|YP_001599232.1| transporter, putative [Neisseria meningitidis 053442] gi|161595616|gb|ABX73276.1| transporter, putative [Neisseria meningitidis 053442] Length = 356 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YMEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|110643716|ref|YP_671446.1| hypothetical protein ECP_3569 [Escherichia coli 536] gi|117625751|ref|YP_859074.1| hypothetical protein APECO1_2980 [Escherichia coli APEC O1] gi|191170454|ref|ZP_03032007.1| putative membrane protein [Escherichia coli F11] gi|218560542|ref|YP_002393455.1| hypothetical protein ECS88_3877 [Escherichia coli S88] gi|218691759|ref|YP_002399971.1| hypothetical protein ECED1_4147 [Escherichia coli ED1a] gi|110345308|gb|ABG71545.1| putative membrane protein [Escherichia coli 536] gi|115514875|gb|ABJ02950.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|190909262|gb|EDV68848.1| putative membrane protein [Escherichia coli F11] gi|218367311|emb|CAR05089.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218429323|emb|CAR10282.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|294490797|gb|ADE89553.1| putative membrane protein [Escherichia coli IHE3034] gi|307555568|gb|ADN48343.1| predicted inner membrane protein [Escherichia coli ABU 83972] gi|307628547|gb|ADN72851.1| inner membrane protein YhhT [Escherichia coli UM146] gi|323950142|gb|EGB46025.1| hypothetical protein ERKG_03551 [Escherichia coli H252] gi|323954770|gb|EGB50551.1| hypothetical protein ERLG_03983 [Escherichia coli H263] Length = 349 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPRFNKELT--------------RKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|256053066|ref|XP_002570030.1| strawberry notch-related [Schistosoma mansoni] gi|227287385|emb|CAY17644.1| strawberry notch-related [Schistosoma mansoni] Length = 1115 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 89/240 (37%), Gaps = 10/240 (4%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI-- 184 ++ + S L I + G + +++ ++ + + L++ S Sbjct: 766 ITESLWSLMRSNVNLIAQLITTLISLIMSGGHVAMNFVIAFLIFLTVLYYVLAASGSCYL 825 Query: 185 -SQQLDSLGEHLFPAY--WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + SL + V I F+ +A+ GL + + G+ Sbjct: 826 PVAFISSLTPTFTGTNSLITHLYSTVESAISGVFVATLKLALFYGLYTSLTHIIFGLDLV 885 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ AI+ +P G + +I ++I+ ++ A L + + ++VD ++ Sbjct: 886 IIPSVLAAILGAVPIIGTYWAVLPGAIEIIIIRQSLSQAGLLIFFHVLPTYVVDVSVYRE 945 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G T + GG+ G G IGP+L+ V A+ +K ++++ Sbjct: 946 IKGAG---HPYFTGLAIAGGIYCQGPEGAIIGPILLCCFLVGINMFRWAMDSSKNALAAD 1002 >gi|328883612|emb|CCA56851.1| putative integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 121/355 (34%), Gaps = 27/355 (7%) Query: 9 QGIMRWMIMFII-----LVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESST 60 + I W ++ ++ V ++ F PVL A++ P++ + + ++ Sbjct: 13 RRIAAWCVVLLLAAGVAAVGIWLCAVFRTAVTPVLLAILGTALLGPLHRRLV-RLGVRTS 71 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V+V+ + + + ++V+ + A Sbjct: 72 LAAALTVVAVLAVVGGATYIVVAALIETGDQIVASLRQAATD------------IAEHLG 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T ++ K L E F T I + + + + + ++ +FFF RD Sbjct: 120 AAGTSLDDLAKNAKSLLEKFGGTAASGVISGIS-----VVGEMLATAVLALLLMFFFLRD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L SL + ++R + + G T++A+ + +++G + VP Sbjct: 175 SDRAAGALRSLVPRTTGDLVEAMARRAFEAVEGFMRGTTLVALVDAVLIGVGLVVLDVPG 234 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L + + A IP GA +S + L A + I L+P Sbjct: 235 AVGLAALVFVTAYIPYLGAFLSGAIAVLVALADRGFVIALWVLGIVLAVQVIEGNVLQPM 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + +++ + G G+LG+ + L A + E E Sbjct: 295 VQSRTVQMHPAAVMLAITAGASVAGVLGMLLAVPLTAAATGVLGELRTRYGARPE 349 >gi|320457519|dbj|BAJ68140.1| putative transport protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 515 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 71/212 (33%), Gaps = 2/212 (0%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++T+ + A + L+++ +++ ++ G + + + Sbjct: 140 IQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRF 199 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP-GGA 258 + + I S +I+A+ + + VP + L + +++ IP G Sbjct: 200 LLVWTVAQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGT 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I ++ A + ++ + I + L P + + + F ++ Sbjct: 260 YIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQRTMDINAAVAFLSVLA 319 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G F+ + A + I++ + Sbjct: 320 FGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 351 >gi|311694920|gb|ADP97793.1| permease perM [marine bacterium HP15] Length = 359 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 119/356 (33%), Gaps = 16/356 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++I+ + + + AP +++LI+ F + + +++I Sbjct: 15 DEEAVILFLILVTGTIFVIWFGAMLAPAIASLIVAFILQGLVTKLNKL--GVPETVSIIG 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V +V LF + + PR + ++ + H Sbjct: 73 VFLVFLGVLVGFLFGLLPLI---------WTQLSNLAGEAPRIIRELQSYLELLPQQYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L +++ + G ++ F+ + + ++ + I +FFF +D + Sbjct: 124 LISGEAVSTVYSQVSTEVGHMTQWLVSFSLSSIPDLVALLIYMVLVPILVFFFLKDREVL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L P +I V + G + + G A+ L G+P L Sbjct: 184 LNSIARLLPPQRPMML-QIWHEVNLQCANYVRGKAVEILIVGGATYIAFKLLGMPYAALL 242 Query: 245 GVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + +IP GA + V++ L G + + + + L P L Sbjct: 243 SLLVGLSVVIPYIGAAVVTIPVAVIALFAFGWGSQFIWVMVIYGVIQALDGNVLVPILFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + ++ GL G+F L ++ ++ + + S Sbjct: 303 EVNNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAVFAAWPVKESAPPAEPGS 358 >gi|254447267|ref|ZP_05060734.1| permease PerM [gamma proteobacterium HTCC5015] gi|198263406|gb|EDY87684.1| permease PerM [gamma proteobacterium HTCC5015] Length = 354 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 4/220 (1%) Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + G F+ + G + + + +I + +FF +D I Sbjct: 124 QQMAELIDSLRGEIGSLGQSFVSFSIASAG-NLITFGIYLILVPTLMFFMLKDKAQILDW 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + K++ V I + G I V + +++ G+ + L + Sbjct: 183 MRGFMPD-NRSLIKEVWHEVDIKIGNYVRGKFIEIGIIWAVSYATFFVMGLNYALLLSAL 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPI 305 + +IP GA V++ + + L + ++D L P L + Sbjct: 242 VGVSVIIPYIGAIAVTIPVALIAFFQWGVSAELLYLLIAYQVIQVLDGNVLVPVLFSEVV 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + +V G G+F L L+ + K Sbjct: 302 NLHPVAIIAAVVFFGGIWGAWGVFFAIPLATLVQAVLKAW 341 >gi|32477422|ref|NP_870416.1| permease [Rhodopirellula baltica SH 1] gi|32447973|emb|CAD77493.1| predicted permease [Rhodopirellula baltica SH 1] Length = 435 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 111/338 (32%), Gaps = 13/338 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + + L LY P+ A + + PI + A + Sbjct: 68 RGMVTAIAAILTLGMLYIASDLLVPIAIAALAYLSLRPIEAKICR--WGVPQAAASAMLI 125 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + ++ L Y + + A + + + + A + + Sbjct: 126 AGLFSSLALIIALLYSPAQQ------WLTSAPESLAAIRGKFQSVAEPLTAVDRAGTAVD 179 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E ++ + + + + FF G + + Sbjct: 180 DATIPLKEDEPRIEVAYQKPSIVDETVLINQTGQMLAFVAAIAVLTFFMLSTGDDLLNRT 239 Query: 189 DSLGE--HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + KKI + + + +T I IG G+ + WL G+P+ V GV Sbjct: 240 LGVLPNSRSRGEVLKKIGD-IQQSVGRYLAQITCINIGLGVAVTFVMWLVGMPTPVLWGV 298 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDK-TLRPFLVGGP 304 + A+ IP P++ T++ + + CL + V+ + P ++G Sbjct: 299 MAALFNFIPYVGPLAATSIVFLAAASSFDTMSRACLTAFAFWLTTAVEGQFVTPTILGKT 358 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +K+ + + GL G+F+ L+ + I+ Sbjct: 359 LKVGPVVVLIAVAFWGFLWGLSGVFLAVPLLIVQRKIF 396 >gi|229011253|ref|ZP_04168446.1| UPF0118 membrane protein [Bacillus mycoides DSM 2048] gi|228750136|gb|EEL99968.1| UPF0118 membrane protein [Bacillus mycoides DSM 2048] Length = 339 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 116/338 (34%), Gaps = 19/338 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQKFISKKLKVNRKVVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + L +++ +L+ + L QH P + + + E+ Sbjct: 69 YIVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQH-PPDNEMIRYVLSAINEMEVSKYI 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + + S F ++ + +S Sbjct: 128 EQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIISFT-------------SKFKD 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ +R KVI + F +IA+ ++ A + G P + L V Sbjct: 175 SKLKIFYEEIAYFGERFARSFGKVIEAQF----LIAVVNCVLTVIALVILGFPQLLVLAV 230 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP G IS + I G + + ++ + + L P + Sbjct: 231 MVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMSAKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 291 NLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|229059620|ref|ZP_04196998.1| UPF0118 membrane protein [Bacillus cereus AH603] gi|228719633|gb|EEL71232.1| UPF0118 membrane protein [Bacillus cereus AH603] Length = 339 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 117/338 (34%), Gaps = 19/338 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+++ LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILVLVLYGLKSMINLILITFILTFLMDRFQKFISKKLKVNRKVVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + L +++ +L+ + L QH P + + + E+ Sbjct: 69 YIVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQH-PPDNEMIRYVLSAINEMEVSKYI 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + + S F ++ + +S Sbjct: 128 EQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIISFT-------------SKFKD 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ +R KVI + F +IA+ ++ A + G P + L V Sbjct: 175 SKLKIFYEEIAYFGERFARSFGKVIEAQF----LIAVVNCVLTVIALVILGFPQLLVLAV 230 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP G IS + I G + + ++ + + L P + Sbjct: 231 MVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMSAKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 291 NLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|89054705|ref|YP_510156.1| hypothetical protein Jann_2214 [Jannaschia sp. CCS1] gi|88864254|gb|ABD55131.1| protein of unknown function UPF0118 [Jannaschia sp. CCS1] Length = 374 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 113/341 (33%), Gaps = 20/341 (5%) Query: 13 RWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 R I I + L L+ F PV++A + F +++K A Sbjct: 22 RIEIPLIGIFCLLLLQALVSGSDFLVPVIAAFLGYFVLNRP-RRWLAKLGVIPVVSAAFF 80 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T ++ +V L+ L +++L S + + L I + Sbjct: 81 TTALTAAIVVLLVQLSSPAAQFLEDLPSLIEEIKEKLDAAGGPLESI----------NQA 130 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + E + A+ + + I F +I LFF G Sbjct: 131 ADAAEEIIADQEADTVAVEVVSQTGVAATIFSLAPGFLSRIGFALILLFFLVASGDMFLT 190 Query: 187 QLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ +I + + G+TII G G+ +G A L G+P + G Sbjct: 191 KTVQSFDNFSDKRRAVEILHRIEDRLGYYLGGITIINAGLGVAIGLAMQLWGLPGAILFG 250 Query: 246 VITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + +P + + A ++ + + A +F + + + P ++ Sbjct: 251 FMAFGLNYVPFLGGLMGATIAAAVAFVSLDATWAAAGVFASYVALTSVEGQLVTPMVISR 310 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +KL F + ++G+ + ++ + + E Sbjct: 311 RMKLNTTVVFLSVAFFAWIWSVMGMVVALPILIVTKIACDE 351 >gi|326563941|gb|EGE14191.1| hypothetical protein E9O_07758 [Moraxella catarrhalis 12P80B1] Length = 385 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 123/341 (36%), Gaps = 5/341 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI--YSSFISKKEESSTF 61 T I + + ++L+S Y+L + V +++++ + Y + I + Sbjct: 3 TQEQKSFIFMTVAVVLMLLSFYYLIHVWLIVFASILMAVWLLSLVEYLTLIPWVGQYLKK 62 Query: 62 LA--VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 L ++ T+ +M L V +G +L + +L Q + ++L+ A Sbjct: 63 LPHGILLTMVLMGLVGVLSTLAALFGHELALQLENLKLLVPQAFEYMNQYLTQYLQTHPA 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L + L+ + FL + + G + ++ II LF Sbjct: 123 VYEWLAGLEWARELRDNPQQFLTRFSDGAMAYLPTYLGGMVSGMGTLVVITIIGLF-LAI 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + ++ + + + ++ LG ++ G+ G A WL G+P Sbjct: 182 SPSVYRRSFVAMVPKDSRDKAEYLLDRSYRSMQQWLLGQLVVMAFVGIATGIALWLMGIP 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +ALG I ++ +P P + L + + + L + + + P Sbjct: 242 FALALGFIAFLLDFVPVLGPWLSAIPILLLTLIVSPKMLLWVALMIVVVQQLESYVISPI 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + LP + V G+LG+ + LM ++ V Sbjct: 302 VQNRMVDLPPVALLLSQVIMGSITGILGIALATPLMVMVIV 342 >gi|241710578|ref|XP_002412051.1| transmembrane protein, putative [Ixodes scapularis] gi|215505112|gb|EEC14606.1| transmembrane protein, putative [Ixodes scapularis] Length = 968 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 6/191 (3%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G L++ L+ + + ALF+ R + LD + P ++ V + + F Sbjct: 697 GTAVLNFVLNFVVFLTALFYLLRASGERYKPLDLFA-SMLPGSASRLGEAVEEAVAGVFA 755 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI-KGN 274 +A GL + L V + ++ +P GA + + L + +G Sbjct: 756 ASFKMAAFYGLYTWLIHTLFEVKMVYIPTALASLFGAVPFIGAYWACLPAVLELWLVQGQ 815 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + A C+ L VD + + GG T + GGV +G G GP+L Sbjct: 816 VVKALCMLLCQLAPTSFVDCAIYSEIKGGG---HPFLTGLAIAGGVFCLGFQGALFGPML 872 Query: 335 MALIAVIWKES 345 + ++ V Sbjct: 873 LCVLIVAMNMY 883 Score = 36.7 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 +++ + N I+ + + V++YF L+ F P+L A++ G P S Sbjct: 27 LKQAVYNTATILFAAFVSVAGVAVYFILRPFLGPLLWAVLFGSVLHPFKRSLCLLLGG 84 >gi|15677092|ref|NP_274244.1| putative transporter [Neisseria meningitidis MC58] gi|7226458|gb|AAF41601.1| putative transporter [Neisseria meningitidis MC58] gi|261392518|emb|CAX50073.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] gi|316985071|gb|EFV64024.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325140551|gb|EGC63072.1| putative membrane protein [Neisseria meningitidis CU385] gi|325198350|gb|ADY93806.1| putative membrane protein [Neisseria meningitidis G2136] gi|325200151|gb|ADY95606.1| putative membrane protein [Neisseria meningitidis H44/76] Length = 356 Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|261221912|ref|ZP_05936193.1| permease [Brucella ceti B1/94] gi|260920496|gb|EEX87149.1| permease [Brucella ceti B1/94] Length = 224 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 3/173 (1%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 +D + + F+ D + +DS ++I+R + + G Sbjct: 1 MIDIAGLFVVTPVVAFYMLLDWDRMVNSIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQG 60 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIF 276 + + G L G+ + +G +++ IP A++I + + + Sbjct: 61 TLCLILGTYYAIGLTLTGLNFGLLIGFFAGLISFIPYIGSFVGLALAIGVALVQFWPDWI 120 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + FI L+P LVG + L + F L G G+ Sbjct: 121 MVCTVAAVFFLGQFIEGNILQPKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 173 >gi|182417076|ref|ZP_02948454.1| permease [Clostridium butyricum 5521] gi|237668835|ref|ZP_04528819.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379085|gb|EDT76589.1| permease [Clostridium butyricum 5521] gi|237657183|gb|EEP54739.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] Length = 389 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 115/343 (33%), Gaps = 12/343 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTS---------WPIYSSFISKKEESSTFLAVI 65 M++ I + L+ F A I+ F + K+ ++ Sbjct: 35 MLLGKISGVIGILQPFIIGFSIAYILNFILRFFERTIFDFEFVKKLEFKRNSKRAIGLLV 94 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + F+ M + L++ + + +++ D+ + + Sbjct: 95 TYFVSFIVLYLFIKFVLPQLMDSIVGLINDIPMYISKTT---KFIDDLLLKLNIERQYLD 151 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + I T+ + + + + L II I L + Sbjct: 152 LINENFNRFIDYVIRFVTDLLPILGTLLTSVASKIWNIVLGIIISIYLLSDKEKFCALSK 211 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ +I+ +G + ++ G++ ++ +P + + Sbjct: 212 KITYAVFPKAVAEKSIEITHRSNSTFGKFLVGKILDSVIIGILTFFILTVSKMPYAILIS 271 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI I +IP P S +++ + A + + I + P ++G I Sbjct: 272 VIVGITNIIPFFGPFIGAIPSFIIILFVSPVKALWFLVIILVIQQIDGNIIGPKILGDSI 331 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + F ++ + +GL+G+ IG L A++ + KE + Sbjct: 332 GVSAFWILFAILVAGKFLGLVGMIIGVPLFAVVYSLLKEIVEG 374 >gi|193061710|ref|ZP_03042807.1| putative membrane protein [Escherichia coli E22] gi|194427052|ref|ZP_03059604.1| putative membrane protein [Escherichia coli B171] gi|260846258|ref|YP_003224036.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|192932500|gb|EDV85097.1| putative membrane protein [Escherichia coli E22] gi|194415013|gb|EDX31283.1| putative membrane protein [Escherichia coli B171] gi|257761405|dbj|BAI32902.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|323162714|gb|EFZ48553.1| hypothetical protein ECE128010_1120 [Escherichia coli E128010] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + IA V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----IAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|330982824|gb|EGH80927.1| hypothetical protein PSYAP_30563 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 98/254 (38%), Gaps = 11/254 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 13 LALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVVVFGL 64 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 65 FTLVLMALLLILVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKFDKIKA 124 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 125 AISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 184 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 185 RQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 244 Query: 254 IPGGAPISFTAVSI 267 +P + ++ Sbjct: 245 VPYMGFVIGIGSAL 258 >gi|183220231|ref|YP_001838227.1| putative permease protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910349|ref|YP_001961904.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775025|gb|ABZ93326.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778653|gb|ABZ96951.1| Putative permease protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 352 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 125/347 (36%), Gaps = 12/347 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I IL+ + +K P+L + I + + F S+ + + VI T Sbjct: 14 RSAFFGLIALTILIGIVGVKFLAIPLLISGIHFYIFHGVVDYFESRGIHRAITIIVIFTF 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F + + +VS+ + + +P ELW K ++ Sbjct: 74 LITFAYWF-LAFYLPNLFEKAQPIVSEWSIKMDDPNFQLLDFTKLPVVSKNPELWKKIIN 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + F ++ + +I + I FF D I + + Sbjct: 133 PEE---------IAKLATNNLEEFLRSIVVMIPTFISWMIIIPIISFFLLLDANVIYKTM 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + F + + + + I S + I LV ++ G+ V GV Sbjct: 184 ISFIPNRFFEMFLMVFYRMNQQITSYLKSLVIQCGIMALVSSIGFYFIGMKFFVLFGVFL 243 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIK 306 + IP G I ++ ++ + + I +VD ++P ++ + Sbjct: 244 GVANSIPYLGPLIGAIPPILFAILFPEMSPSIGSIASVVIVAQLVDNAIVQPVVIANAVS 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L G+ G G+ G+ + +++++ V A+KE++ Sbjct: 304 LHPLAILIGIAVGGNFFGIFGMLLAIPVLSILKVTIGILYHALKEHQ 350 >gi|119025423|ref|YP_909268.1| hypothetical protein BAD_0405 [Bifidobacterium adolescentis ATCC 15703] gi|118765007|dbj|BAF39186.1| hypothetical integral membrane protein [Bifidobacterium adolescentis ATCC 15703] Length = 507 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 110/353 (31%), Gaps = 23/353 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 + P+ + R ++ I + L ++ V+ +L + P+ + Sbjct: 39 DPRRPPEWLGRALLYIAIAIVLLSFCWRSWGKIEYLIIDVVISLFLALAVEPVVIPLVKH 98 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +F ++ A + + L V + ++ L + + Q Sbjct: 99 -GWKRSFASIFALLMLGVLLCVMFGLFGNLFVQQVIALCNGLPALYQQ------------ 145 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + ++ L SL ++T+ + A F + L+++ +I+ Sbjct: 146 ICDFVAQYTDFKLPEINSLGGEILKNIQTSWVTDFAGTAISTVSGFFSFLLNLMTVIMTT 205 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ G + + + + + I S I+A+ Sbjct: 206 FYISAAGPKLRRAACQWMAPSAQRRFLFVWTVSQTQISSFLFSRAILAVLNAFFTSICLM 265 Query: 235 LAGVPSHVALGVITAIMA-MIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 VP + L + +++ IP G I ++ ++ A + + + I Sbjct: 266 ALHVPYWMPLALFCGVVSQFIPMLGTYIGGALPVLFAWGSCGLWQAIAVVAFICVYQQIE 325 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + + + F ++ G +G F+ ++A I I + Sbjct: 326 NLIFASKISRRTMDVNDAVAFLAVLAFGSLFGAIGAFLALPIVASIQTIARTY 378 >gi|254804996|ref|YP_003083217.1| hypothetical protein NMO_1025 [Neisseria meningitidis alpha14] gi|254668538|emb|CBA05961.1| conserved hypothetical protein [Neisseria meningitidis alpha14] gi|325144636|gb|EGC66935.1| putative membrane protein [Neisseria meningitidis M01-240013] Length = 356 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 19 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 77 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 78 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 132 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 192 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 251 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 252 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 312 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|251797637|ref|YP_003012368.1| hypothetical protein Pjdr2_3650 [Paenibacillus sp. JDR-2] gi|247545263|gb|ACT02282.1| protein of unknown function UPF0118 [Paenibacillus sp. JDR-2] Length = 346 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 100/259 (38%), Gaps = 6/259 (2%) Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 VP+ +++I + + + + Q +++++T K F+ A + + Sbjct: 87 YVPKLINEIVDIVNNVQKFLGSAQNDQIAQVVADTLDKIEYKTFL-NSALAYAKKIGGWL 145 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTII 221 I+ +I+ +FF + I Q + ++ +I Sbjct: 146 EIILLVILLSYFFLLERRKIVQFTEKFSNSSIGWLYLEFRYFGGKFIASFGKVLEVQLMI 205 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATC 280 A+ + + W+ G P AL ++ ++++IP + F + I G I Sbjct: 206 ALFNTALTIAGLWIMGFPYLFALTIMVFLLSLIPVAGVVVSFVPIGIIGYQLGGIKTVIW 265 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + + + + L P L LP TFF L+ MG+ GL IG P+ M ++ Sbjct: 266 VIVLVLLIHALETYFLNPRLYSHKTNLPMFYTFFILILSEHYMGIWGLLIGIPIFMFMLD 325 Query: 340 VIWKESIMAIKENKEKISS 358 V+ E +++E + + S Sbjct: 326 VLKVEQADSLEEQAKPVKS 344 >gi|330909515|gb|EGH38029.1| putative PerM family permease [Escherichia coli AA86] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 115/323 (35%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 12 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ + + Sbjct: 67 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEML 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 113 PFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + R + V L + ++ G+++ L GV + V+ Sbjct: 173 R-FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 231 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 291 STMVVFLSLLIWGWLLGPVGMLL 313 >gi|209522034|ref|ZP_03270692.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209497535|gb|EDZ97732.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 596 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 100/327 (30%), Gaps = 14/327 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------STFLAVIATVSVM 71 +++ +LYF + P+ ++++ F P+ + A+ + +++ Sbjct: 33 VVVVCALYFGREVLIPITLSVLLSFLLAPLVQMLRRLHMGQLPSIFIAVLFALASLLAIG 92 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL----SDIPGGMWASELWTKHL 127 L L+ L + + K+ + + L + M S HL Sbjct: 93 ALIGAQLVQLAGALPQYQEAIEQKIETVQEKTVGRADSLMTSAATALQRMAPSRPAPPHL 152 Query: 128 SHPQSLKILSETFLKTNGIDFI--PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + A R + + +++ F + Sbjct: 153 TGRAARNAPQVPQQVEVHEPALTPVQLAQRALTPAIAPIETTFIVLVVTIFILLQREDLR 212 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L SL + F+ + + G ++ + GVP + G Sbjct: 213 DRLISLFGSRDLHRTTTAINDAAGRLSRYFVAQLGVNLSAGSIIAIGLAMIGVPGALLFG 272 Query: 246 VITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI A++ +P G + AV + I+ A + + + P + G Sbjct: 273 VIAALLRFVPYIGIWIAALFAVFLAAAIQPQWTMAVYTLILFIVVDVAAGQIAEPLVYGH 332 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L L + G +GL + Sbjct: 333 RSGLSPLAVVVAAIFWSWLWGPIGLVL 359 >gi|331085679|ref|ZP_08334762.1| hypothetical protein HMPREF0987_01065 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406602|gb|EGG86107.1| hypothetical protein HMPREF0987_01065 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 463 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 49/395 (12%), Positives = 127/395 (32%), Gaps = 40/395 (10%) Query: 2 RETMLNPQGIMRWMIMFIILVS-----LYFLK------------GFFAPVLSALIIGFTS 44 R T Q + R M F+++ + FL+ P++ ++ + Sbjct: 29 RTTSKLQQHLNRGMTAFLVVAASIVFYFAFLRFGHISGVLGKIFQILKPIIYGFVLAYLL 88 Query: 45 WPIY----SSFISKKEES-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 P+ + + + F + + + ++ L + E+ + Sbjct: 89 NPLMKMVENFIVKLLKGKIKKEERLKKFARGVGIFTALLFAGALIVALCNMILPELYRSI 148 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH-PQSLKILSETFLKTNGIDFIPRF 152 +V + W+ + + + E +++++ + I + Sbjct: 149 RNMVYTVPEQL--NEWMERLSEMEFDDSTLALITKNVLTETTAFFENWIRSDLLRQINIW 206 Query: 153 ASRFGMI-------FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 S ++ + II + LF + + ++ + I+R Sbjct: 207 ISGLTEGVISVVNELMNIVIGIIVSVYVLFSKETFAGQSRKVVYAVLKPEKANLVLHITR 266 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTA 264 ++ +G I + G++ + +P + + VI + +IP G I Sbjct: 267 KSNEIFGGFIIGKIIDSAIIGVLCFIGLSILDMPYTLLVSVIVGVTNVIPFFGPYIGAIP 326 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +I +L+ + ++ + + P ++G L F ++ G G Sbjct: 327 SAILILLT-DPIKGLYFLVFIIFLQQLDGNIIGPKILGDSTGLSAFWVVFSILLGGGLFG 385 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ +G A+I +++ I E K + + Sbjct: 386 FAGMIMGVPTFAVIYYLFQMFINQNLEKKHLPTDS 420 >gi|296105169|ref|YP_003615315.1| hypothetical protein ECL_04839 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059628|gb|ADF64366.1| putative membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 116/321 (36%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + F+ + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFLRRGISRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L LF + E + + N+ L ++ + Sbjct: 69 VIVMLIALTALFGVLAASLSEFSTMLPQYNKELTRKIVALQEMMPFL------------- 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + I +A+ SI+ +++ + F + + +L Sbjct: 116 -NLHISPERMLRRMDSEKIMTYATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKL-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V + L + ++ G+++ L GV + GV+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSKYLALKTLL-SVWTGVIVWLGLMLMGVQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA +S I + + + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVLSAVPPMIQAFLFNGFYECMLVGALFLVVHMVLGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLIWGWLLGPVGMLL 313 >gi|157737983|ref|YP_001490667.1| hypothetical protein Abu_1751 [Arcobacter butzleri RM4018] gi|157699837|gb|ABV67997.1| conserved hypothetical transmembrane protein [Arcobacter butzleri RM4018] Length = 347 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 100/266 (37%), Gaps = 7/266 (2%) Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE---LWTKHLSHPQSLKILS 137 + Y +L + ++ + A I + +L+++P + L + H + L I Sbjct: 58 IVSYFLLLLIVIILGFMFAYVINISLKDFLANLPSYEVKLKNLVLNSIHFAQSYGLNIDK 117 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++T + + + +II + F + S +L + + Sbjct: 118 AKIMETLNFSSFFGLTTNIIGSISTFLSKFLLVIIGVAFILAESKSFQTKLKVIFRNNAK 177 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG- 256 + + I+ F+ T + G ++ V + GVI + +P Sbjct: 178 KL--QHFNLFSFNIQKYFVVKTFTSFLTGFIVTIMLAFFNVDYPILWGVIAMLFNFVPVV 235 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G+ I+ + L+ +IF+A + + + + L P L+G + L L FF L Sbjct: 236 GSIIASIPAILLALMNLDIFSAIWVIILYMVINISISNILEPKLMGRELGLSPLIIFFSL 295 Query: 317 VGGVRTMGLLGLFIG-PVLMALIAVI 341 + +G++G+F+ P+ M L Sbjct: 296 IFWGYILGIVGMFLAVPITMTLKIAF 321 >gi|158319308|ref|YP_001511815.1| hypothetical protein Clos_0256 [Alkaliphilus oremlandii OhILAs] gi|158139507|gb|ABW17819.1| protein of unknown function UPF0118 [Alkaliphilus oremlandii OhILAs] Length = 400 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 111/301 (36%), Gaps = 11/301 (3%) Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASEL 122 + S++ + I+ ++ ++E+ V + + A + +W D+P + + Sbjct: 99 LFLFSLIAMVIIFVVPQIGGNIIEISRRVPEYLNATIDFADELIEKWAKDLPSTSNLNNV 158 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ ++ ++ L + I R M L+ + II F+ D Sbjct: 159 GEYIEANINTIFSNTKLVLDYIFNNLIMRV-----MNITSGILNFVMGIIISFYLLGDKE 213 Query: 183 SISQQLDSLGEHLFP----AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 S + + + +F + R + +G I + G++ + + Sbjct: 214 SFKKGTERILRAVFSKKTVDRVVDLGREADTIFGKFVVGKFIDSFIIGVLCFIGLTILKI 273 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + VI I MIP P ++ + + + NA + ++ I L P Sbjct: 274 KYGLLISVIIGITNMIPYFGPFIGAVPAVLITLFDSPINAIWVMIFIFILQQFDGLYLGP 333 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++G + + F +V G G+LG+F+G ++A+I I E KE+ Sbjct: 334 KILGDSVGISPFWIIFSIVLGGGLYGVLGMFLGVPVVAIITTFSNRLIDWQLERKEEKEH 393 Query: 359 N 359 Sbjct: 394 Q 394 >gi|259502286|ref|ZP_05745188.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259169751|gb|EEW54246.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 373 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 114/332 (34%), Gaps = 11/332 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFIS------KKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 P+L II + + + K + F + V + L + Sbjct: 40 VTPLLIGAIIAYIVNLLLRKYEQLYQQLFKGPRARKFQRLWGIVLSYLSIFLILAIVIRL 99 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ V ++ N H + R+++ +++ + S + Sbjct: 100 VIPELISCVQLLI--NNHSRVITRFITAFEHNSNLQDIFRRFDIRHLSWAKAEKILSYGF 157 Query: 145 GIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G F + AS + ++ F I L + ++ +D+ + Sbjct: 158 GGTFKALMSTASSVVSVATTSVVAFFFSIYLLIYKEMLAHQCTRLIDAYLGKIKRPLM-Y 216 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + R + G A G+ + +P +GV+TAI A+IP I Sbjct: 217 VVRTFDNCYSNYIGGQCKDAAILGITCFIGMTILRMPYATMIGVVTAIGALIPIIGAILG 276 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + L+ + A ++ + + ++ P +VG I LP + F ++ G Sbjct: 277 ASIGVVLIFAVSPLKAGIFLVFIIVLQQLDNRITYPLVVGKSIGLPSVWVFAAVIVGGSI 336 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+LG+ + L A + I + + N + Sbjct: 337 SGILGMMLTVPLFAALYQIVATDVGKREANAQ 368 >gi|215488750|ref|YP_002331181.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|293412895|ref|ZP_06655563.1| conserved hypothetical protein [Escherichia coli B354] gi|312968213|ref|ZP_07782423.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331665083|ref|ZP_08365984.1| putative membrane protein [Escherichia coli TA143] gi|215266822|emb|CAS11263.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|291468542|gb|EFF11035.1| conserved hypothetical protein [Escherichia coli B354] gi|312287038|gb|EFR14948.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|320194024|gb|EFW68657.1| Putative PerM family permease [Escherichia coli WV_060327] gi|323188935|gb|EFZ74219.1| hypothetical protein ECRN5871_2527 [Escherichia coli RN587/1] gi|331057593|gb|EGI29579.1| putative membrane protein [Escherichia coli TA143] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|220907294|ref|YP_002482605.1| hypothetical protein Cyan7425_1877 [Cyanothece sp. PCC 7425] gi|219863905|gb|ACL44244.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 355 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 6/260 (2%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT--NGIDFIPRFA 153 V +P ++ + + W + P +L + T + ++ + Sbjct: 89 VAELQDLTAALPVLIASSNERLAGVQRWLIYRDLPINLNQWLDQLTATLPDTLNRLSDQL 148 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + + LD ++ ++ F+ DG I L F K + R + + ++S Sbjct: 149 WQIVLETLDSVAEVLLTLVLTFYLLLDGEKIWGGLTQQA---FGGRLKPLGRSLQQNLQS 205 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 FLG +A G V+ L G+P + LG+ + ++P G T V++ + ++ Sbjct: 206 YFLGQFTLAALMGTVMILVLLLLGIPFALLLGLGIGLFTLLPFGDVFGMTLVTLAIAVQ- 264 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 N + + I I+D+ + P L+G + L + L+ G + GL G+ + Sbjct: 265 NPEQGLKVAIAAVIVDQIIDQLVVPRLLGSLVGLRPVWVLAALLVGAKIAGLTGIILAVP 324 Query: 334 LMALIAVIWKESIMAIKENK 353 L + Sbjct: 325 LAGFCRSALDGFVEGSTPPN 344 >gi|71898100|ref|ZP_00680286.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|71732074|gb|EAO34130.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] Length = 385 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 136/338 (40%), Gaps = 16/338 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ +L + L P + ++ +G+ + P+ S +AV ++ L Sbjct: 19 YVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVE--WVGVSRAMAVCFVFFLVVL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQ 131 +V +L +F + +VV + W+ + IP + + P+ Sbjct: 77 LLVLVLMIFVPLIE------RQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPE 130 Query: 132 SLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + G + + SR G + + + +++ + I F+F RD +++ Sbjct: 131 QMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILSFYFLRDWDKWVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + +++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 191 AAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLRLGLLIGLIAG 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +++ IP I+ +++ +I ++ + + + + L P +VG I Sbjct: 251 LISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + F ++ G + G +G+ + + A++ V+ + Sbjct: 311 GLHPVAVIFSVMAGGQLFGFVGMLLALPVAAVVNVLLR 348 >gi|331269591|ref|YP_004396083.1| hypothetical protein CbC4_1407 [Clostridium botulinum BKT015925] gi|329126141|gb|AEB76086.1| hypothetical protein CbC4_1407 [Clostridium botulinum BKT015925] Length = 369 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 102/328 (31%), Gaps = 3/328 (0%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I + PI K + + T + + ++ L + + + Sbjct: 43 LMPFIVAFAIAYILNPIMKFIEKKLKVNRTISVLFTYILIIILITIFSMTVIPKVFNSGM 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++V K+ Q W++ + + I + + + + Sbjct: 103 DMVDKMPEFAQKMY---SWVNSHISSKLMNSGSGNFVRDNAGKWIEKFSAISSTWLAVAL 159 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 +++ +I I L+ + + + L + ++R V ++ Sbjct: 160 NQIVSTTTSLINFVFGLIISIYMLYDKEKFKQNSKNLVYILLSEKWGNKLINVARNVDEM 219 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + I + G++ L P + + +I + MIP P + Sbjct: 220 VGTYIGIKAIDSFIIGIICFVGLMLFKCPYVLIISIIVMVTNMIPYFGPFMGMIPPFLIN 279 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + ++ + L P LV + + G+ G++G+ + Sbjct: 280 VFYDPKKAFGILIFLVLLQQFDAWILEPKLVSDRVGVSPFLVILGITVFGSLFGIIGMLL 339 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISS 358 +MA++ + + K Sbjct: 340 ASPIMAVLNIYVGGWFRRKVQEFNKTKE 367 >gi|331659770|ref|ZP_08360708.1| putative membrane protein [Escherichia coli TA206] gi|222035180|emb|CAP77925.1| UPF0118 inner membrane protein yhhT [Escherichia coli LF82] gi|312948027|gb|ADR28854.1| predicted inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|331052985|gb|EGI25018.1| putative membrane protein [Escherichia coli TA206] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|297193201|ref|ZP_06910599.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720471|gb|EDY64379.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 366 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 117/334 (35%), Gaps = 25/334 (7%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + V ++ + F PVL AL+ P+Y + K + + A + V+V Sbjct: 23 LLVTGVAAVGIWLVVRFQTAVTPVLLALLGTALLGPLYRRLLRMKVQ-QSLAAGLTCVAV 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + + ++V+ + A S + + Sbjct: 82 VAVVGGAVYIVVSALIETGDQIVASLRQA----------------ASDLSRHFGAAGTSL 125 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + L G S ++ ++++ +++ FF RD L S Sbjct: 126 DDLASNARELLGKFGGTAASGVISGLSVVSEMIAIAVLALLLIF-FFLRDSDRAVGALRS 184 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + I+R + + G T IA+ + L + + VP V LG + + Sbjct: 185 VAPGDGGELVEAIARRAFRGVEGFMRGTTFIALIDALCITLGLLVLRVPGAVGLGALVFV 244 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI--ELFIVDKTLRPFLVGGPIKLP 308 A IP AV++ L+ + L+ G + + L+P + + + Sbjct: 245 GAYIPYLGAFISGAVAV-LVALADRGFVIALWALGVVLAVQVLEGHVLQPMIQSRTVHMH 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + G G+LG+ + PV A+ + Sbjct: 304 PAVVLLAITAGASLAGVLGMLLAVPVTAAVFGAV 337 >gi|317481222|ref|ZP_07940293.1| hypothetical protein HMPREF1007_03412 [Bacteroides sp. 4_1_36] gi|316902555|gb|EFV24438.1| hypothetical protein HMPREF1007_03412 [Bacteroides sp. 4_1_36] Length = 371 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 113/334 (33%), Gaps = 15/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY-G 85 L G P A +I + +P+ + F + + +++ + + + +L Sbjct: 31 LSGVLLPFFIAWLIAYLIYPLVTFFQYRLRLKNRVISIFCALFSILIVGGTAFYLLVPPM 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 M E + V+ +G SE +++ ++ E + Sbjct: 91 MDEFVRVKDLVIDYFSNGTHDGN------VPKTLSEFLRENIDTQFVTQLFKEENMLNAI 144 Query: 146 IDFIPRFASRFGM--IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +PR S L + +++ + F D SIS+ L + + + Sbjct: 145 KETVPRLWSLLSESVNLLFSFFTFFLILLYIIFILLDYESISEGWPHLVPQKYRPFVINV 204 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V + F G +A+ G++ + + P + LG+ + ++P I F Sbjct: 205 MNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNLVPYLQIIGFI 264 Query: 264 AVSIYLLI----KGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ G F I I D + P ++G L L Sbjct: 265 PTIVLAILKAADTGGNFWIIIASALAVFIIVQAIQDGFIVPRVMGKITGLNPAIILLSLS 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 MG+LG+ I L L+ ++ I+ ++ Sbjct: 325 IWGSLMGMLGMIIALPLTTLMLSYYQRFIINREK 358 >gi|307293615|ref|ZP_07573459.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306879766|gb|EFN10983.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 360 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 104/350 (29%), Gaps = 20/350 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + W M I + L L ++ AL++ + I + Sbjct: 26 KRAGVWFAMGIAIALLVLLAQPILLIMGALVLATMMDGGTRLLGRLLPIGRGWRLCIILI 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + V+ + +WL + + + Sbjct: 86 AALTFLVYTFYLTGSSLAAQAQAMR---VIVETQINRIGQWLQQLGVTTTPEDFKS---- 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + R + G + S + M++ F + + + Sbjct: 139 ------------LAQQAMRSLGRVTAAVGT-MVGAITSGVMMLVLAIFIAMEPKLYERGV 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + I+ + +R G I EG+ W GVP LG++T Sbjct: 186 AWMLPMDKRGRFYTIADKMGWTLRRLMFGRLIGMAVEGVGTWLLLWAGGVPMAGLLGILT 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P I + + + F + + P + L Sbjct: 246 GLFAFLPNIGSIISGVLIVLVGFSAGADAGLYAFGVYLAVQIVDGYLIVPMVAKRATDLA 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++GLF+ ++A+I V +E A++ + ++ Sbjct: 306 PALVLAAQILFGALFGIMGLFLADPIVAMIKVWLEERSKALEVENGRSAA 355 >gi|260857580|ref|YP_003231471.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260870199|ref|YP_003236601.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|257756229|dbj|BAI27731.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766555|dbj|BAI38050.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|323154313|gb|EFZ40516.1| hypothetical protein ECEPECA14_4004 [Escherichia coli EPECa14] gi|323174113|gb|EFZ59741.1| hypothetical protein ECLT68_1326 [Escherichia coli LT-68] gi|323178999|gb|EFZ64573.1| hypothetical protein ECOK1180_2074 [Escherichia coli 1180] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + IA V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----IAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|187778849|ref|ZP_02995322.1| hypothetical protein CLOSPO_02444 [Clostridium sporogenes ATCC 15579] gi|187772474|gb|EDU36276.1| hypothetical protein CLOSPO_02444 [Clostridium sporogenes ATCC 15579] Length = 325 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 128/331 (38%), Gaps = 13/331 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I FIIL+ ++ + + +I + PI++ F+ K + F A++ V+++ + Sbjct: 2 LLIFFIILIKNTIVRDILSLFFISFVIYYILKPIHT-FLKHKGVNEKFSALLLVVTLIMI 60 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + ++ + + E + S V + ++ I + + Sbjct: 61 IGIFIISIIPAIIKEGYNITSSVGYIQK-------YIDYIYNKINLLNNNKILGGILNKI 113 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + E++ + G + + +F FG LDY + + I +++F G I Q+ + Sbjct: 114 NVKIESYTVSIGENILNKFVG-FGENILDYAV----IPIIVYYFLAAGNKIIQKFFMIFP 168 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + K++ + I+ + ++ G+ + L +I + Sbjct: 169 VKVRGIVKNVFEDIDKILARYIISQIILCLIITILTFLVLVGLGIKLPILLSLINGFFNI 228 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P+ + +I + + A + I L P + G + + L Sbjct: 229 IPYFGPVIGSLPAILIAFTKSPKTALWALILLYAIQQIEGDILSPKITGDSVDMHPLTVI 288 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G + G LG+ + + ++ +I+++ Sbjct: 289 LLLLIGGKIYGFLGMVLAIPIGVIMKIIYED 319 >gi|170679689|ref|YP_001745724.1| hypothetical protein EcSMS35_3758 [Escherichia coli SMS-3-5] gi|218702219|ref|YP_002409848.1| hypothetical protein ECIAI39_3955 [Escherichia coli IAI39] gi|170517407|gb|ACB15585.1| putative membrane protein [Escherichia coli SMS-3-5] gi|218372205|emb|CAR20067.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKMVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|85716427|ref|ZP_01047399.1| hypothetical protein NB311A_02501 [Nitrobacter sp. Nb-311A] gi|85696784|gb|EAQ34670.1| hypothetical protein NB311A_02501 [Nitrobacter sp. Nb-311A] Length = 381 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 95/341 (27%), Gaps = 10/341 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + L ++ + + ++ G + + T VI + L Sbjct: 30 IVAFGAALALAWYSAATLLMLFAGILFGVFLTAMADLLRRIFGGNQTLRLVIVCILFTGL 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL----SDIPGGMWASELWTKHLSH 129 ++ ++ L S + + S + G + L Sbjct: 90 LSGVVVLGGTTIAQQVTALSSTLRAQLGNAKDFLEKQGIDTSFLNVGTRTGPIDVDTLPT 149 Query: 130 PQSLKILS------ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 P + S + +G I + + + +I Sbjct: 150 PTTSASPSRGPKLPDASTIASGTGAIVSQTIKILAHVFEGVGNFFIVIFLGLLLAAQPKI 209 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ + + +R LG L+ L G+P + Sbjct: 210 YRDGILRFVPTRRLPKATRLIDDISETLRRWLLGQMATMATLFLLTWIGLTLIGIPGALV 269 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG +T ++ IP I A+ + + + F+ F+ L P + Sbjct: 270 LGFVTGLLTFIPNVGAILAGALIVLASLGSGLTAIISAFMLYLAVQFLEGNVLTPLIQRH 329 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I +P F + G+ GL + L+A+I V+ Sbjct: 330 AISIPPATLFAAQIFLGVLFGVWGLALALPLIAVIKVVLNH 370 >gi|281180503|dbj|BAI56833.1| conserved hypothetical protein [Escherichia coli SE15] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 115/323 (35%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 12 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ + + Sbjct: 67 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEML 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 113 PFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + R + V L + ++ G+++ L GV + V+ Sbjct: 173 R-FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIIWLGLELMGVQFALMWAVLA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 231 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 291 STMVVFLSLLIWGWLLGPVGMLL 313 >gi|66044791|ref|YP_234632.1| hypothetical protein Psyr_1545 [Pseudomonas syringae pv. syringae B728a] gi|63255498|gb|AAY36594.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] Length = 356 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 110/343 (32%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APVL+ L++ F + S+ + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSALERLRMPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|157157615|ref|YP_001464939.1| hypothetical protein EcE24377A_3956 [Escherichia coli E24377A] gi|170018294|ref|YP_001723248.1| hypothetical protein EcolC_0242 [Escherichia coli ATCC 8739] gi|191169693|ref|ZP_03031381.1| putative membrane protein [Escherichia coli B7A] gi|209920933|ref|YP_002295017.1| hypothetical protein ECSE_3742 [Escherichia coli SE11] gi|218697157|ref|YP_002404824.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|256020822|ref|ZP_05434687.1| hypothetical protein ShiD9_18035 [Shigella sp. D9] gi|307311859|ref|ZP_07591497.1| protein of unknown function UPF0118 [Escherichia coli W] gi|331685120|ref|ZP_08385706.1| putative membrane protein [Escherichia coli H299] gi|157079645|gb|ABV19353.1| putative membrane protein [Escherichia coli E24377A] gi|169753222|gb|ACA75921.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|190900266|gb|EDV60127.1| putative membrane protein [Escherichia coli B7A] gi|209914192|dbj|BAG79266.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353889|emb|CAV00291.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|306908003|gb|EFN38503.1| protein of unknown function UPF0118 [Escherichia coli W] gi|315062753|gb|ADT77080.1| predicted inner membrane protein [Escherichia coli W] gi|320199651|gb|EFW74241.1| Putative PerM family permease [Escherichia coli EC4100B] gi|323182939|gb|EFZ68340.1| hypothetical protein ECOK1357_3827 [Escherichia coli 1357] gi|323376659|gb|ADX48927.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323944479|gb|EGB40553.1| inner membrane protein YhhT [Escherichia coli H120] gi|324116521|gb|EGC10439.1| inner membrane protein YhhT [Escherichia coli E1167] gi|331077491|gb|EGI48703.1| putative membrane protein [Escherichia coli H299] Length = 349 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|166367439|ref|YP_001659712.1| hypothetical protein MAE_46980 [Microcystis aeruginosa NIES-843] gi|166089812|dbj|BAG04520.1| hypothetical protein MAE_46980 [Microcystis aeruginosa NIES-843] Length = 392 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 115/323 (35%), Gaps = 9/323 (2%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +L A ++ F +P+ +++ ++ A++ ++ + +F+ + L + Sbjct: 55 FVILLIAAVLSFLLGYPV--TWLERQGLKRGLAAIVVSLITILIFVAVGITLVPLVFTQA 112 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ V+++ G L M + Q L G Sbjct: 113 QQFVNRLPEWLDSGQRQLMQLDTKIDTMNLPIPISFDGLIAQFNSRLGAELQILAGRS-- 170 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A + + L ++ II F+ I + + + R+ Sbjct: 171 VNLALNLTVFTVVRVLDVLLTIILTFYLLLHSPDIWRSIIQWLPKPVQQPFSLTLRL--- 227 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ F+G I A L L +A+ VP + G++ MA+IP G + V+ L Sbjct: 228 SFQNYFVGQVICATCMALGLVTAFLSIKVPFGLLFGLLIGTMALIPFGGTVGIVTVTALL 287 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ +I A + + IV+ + P ++G L ++ G R GLLG+ Sbjct: 288 ALR-DIGLALQVLAVAVVVQQIVENGIAPRILGSVTGLNPFWVLVSVLTGARVGGLLGVI 346 Query: 330 IGPVLMALIAVIWKESIMAIKEN 352 + + +I + E Sbjct: 347 VAVPMAVMIKEALEVIRQVTPEE 369 >gi|149280338|ref|ZP_01886459.1| permease [Pedobacter sp. BAL39] gi|149228887|gb|EDM34285.1| permease [Pedobacter sp. BAL39] Length = 367 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 103/298 (34%), Gaps = 20/298 (6%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 +K + + A+++ V ++ + L FL + A V W+ Sbjct: 50 METKWKFKRSLAAIVSVVLMIAVISAILFFLANQLTDLWADWPLLKQQAEHSFHDVQGWI 109 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 S + +LK + + AS G + +++F+ Sbjct: 110 S----------------ATFGVNTQKQIDYLKDSTSTALATSASVLGATLMTLSSTLLFL 153 Query: 171 IIALFF---FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 L F + L S+ + +I + + +I+ G+ + + Sbjct: 154 SFLLLFTFFILNYRRVLFTFLTSVFKEEHTEKVSEIVKRIQYIIKKYITGLFLQMFIVTV 213 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ WL V V LG+IT I +IP G + + + + + Sbjct: 214 LMIFVLWLLNVKYAVLLGLITGIFNIIPYIGIFTALLISVLITFATAGVAKVLLVIIAFV 273 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L P +VG +K+ L F G+V G G+ G+F+ +A++ +I+ Sbjct: 274 AVHALDGNILMPLVVGSKVKINALFAFIGIVVGEMVWGISGMFLCIPYLAMLKIIFDR 331 >gi|70726947|ref|YP_253861.1| hypothetical protein SH1946 [Staphylococcus haemolyticus JCSC1435] gi|68447671|dbj|BAE05255.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 361 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 107/332 (32%), Gaps = 16/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F ++S + + S + K + ++ + + + F+ + + Sbjct: 41 FLPFMISGFLFYICL--PFQSILEKWGFPRWASITTIFIGLIAIIAIVVAFIAPIIISNV 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + + + T+ P + + +K+ G Sbjct: 99 NSLIKATPSLQKEAEHIVNF------------SLTQMDKLPSDVTDRINSAVKSIGDSMT 146 Query: 150 PRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 A+ F F+ +I + L + +D L + + + + + Sbjct: 147 GILANSFTYLTSFISTVFLLIMVPFFLIYMLKDHEKFIPALAKFFKGERKVFVVDLMKDL 206 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++S G +++ G++L Y + G+P L + + +IP P A + Sbjct: 207 NFTLKSYIQGQVTVSVILGVILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFAPAA 266 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L I + + + I + + P ++G + + L ++ G Sbjct: 267 VLGIIDSPTTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTL 326 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ I + +K +S+ Sbjct: 327 ILIAVPLYAVLKTIASNVFKYRQRIIDKANSD 358 >gi|330900067|gb|EGH31486.1| hypothetical protein PSYJA_21922 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 359 Score = 66.8 bits (162), Expect = 6e-09, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 110/343 (32%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S+ + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSALERLRMPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|256752917|ref|ZP_05493750.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus CCSD1] gi|256748197|gb|EEU61268.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus CCSD1] Length = 235 Score = 66.8 bits (162), Expect = 6e-09, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 67/178 (37%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A + + L + II + I F+F +D ++++ + + + I + + K++ Sbjct: 49 SAFKSVITILKDAVDIIIIPIVTFYFLKDKKVFKEEIERILPQKYSTKFFNILKKIDKIL 108 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 I+ + L V +GV+ I+ +IP PI ++ + + Sbjct: 109 SKYLRAQIYISTFVAIFTMIGLSLIKVKYAFLIGVLAGILNIIPYVGPILSIIPTVLIGL 168 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ + + + + + P ++ + L + F L+ G LG F Sbjct: 169 LDSLTKGFWALIICLLVQQVENAFITPKIMSDSVGLHPVTVIFSLIAGGELFWHLGTF 226 >gi|325662424|ref|ZP_08151030.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 4_1_37FAA] gi|325471258|gb|EGC74482.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 4_1_37FAA] Length = 376 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 108/316 (34%), Gaps = 4/316 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + +V+ + L G+F P + +I + P+ + + + I V V+ L + Sbjct: 25 VVFVVAGFQLMGYFMPFVIGWVIAMIANPVVRWLEKRLKIVRKLGSAIIIVMVLGLIVTG 84 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L F F E+K + Q R + G++ + + + + Sbjct: 85 LYFGFSKAFTEIKIFIDNFPEMYQQFEEDFRQIGREFQGIFHLLPAELQVGWDEMVNNMD 144 Query: 138 ETF--LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L T + A F +++I +I+ + F + I + Sbjct: 145 QGMADLITGISEPTVTAAGNFAKRLPSILIAVIVTVISAYIFIAERDEIIVWSKKIAPSA 204 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + F I I L+L V + ++ A++ +P Sbjct: 205 VQKKMTMVVDNFKYAVGGYFKAQFKIMIVVALILSLGLAFLKVKYVLLCAILIALLDFLP 264 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + +++ + G+ A L + A +V + ++P LV + L L T Sbjct: 265 FFGTGTAMIPWAVFEFLTGDYKLAIGLIILYATTQ-LVRQLIQPKLVADSMGLTPLVTLV 323 Query: 315 GLVGGVRTMGLLGLFI 330 L G + + G+ + Sbjct: 324 LLYVGYKMGSVFGMIL 339 >gi|320655761|gb|EFX23684.1| hypothetical protein ECO7815_03080 [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 349 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|229065088|ref|ZP_04200382.1| hypothetical protein bcere0026_51420 [Bacillus cereus AH603] gi|228716189|gb|EEL67906.1| hypothetical protein bcere0026_51420 [Bacillus cereus AH603] Length = 344 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 98/282 (34%), Gaps = 8/282 (2%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ Y ML ++ I + + + + ++ + Sbjct: 66 IIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHME 125 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G+D + + + G L LS+I + FF + I E Sbjct: 126 LSKYVGQGVDILYKSITNVGKFGLQVLLSVILSL----FFLLEKARIVAFTSKFKESRLA 181 Query: 198 AYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ +I K RS +IAI ++ A W+ G P + L ++ ++ +I Sbjct: 182 IFYNEIEYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLI 241 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G IS + + G I + + + + L P + LP TF Sbjct: 242 PVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLNPKFMSQKTNLPIFYTF 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ +G+ GL IG + + + + ++++ EK Sbjct: 302 MVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVEK 343 >gi|284164867|ref|YP_003403146.1| hypothetical protein Htur_1587 [Haloterrigena turkmenica DSM 5511] gi|284014522|gb|ADB60473.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 363 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 104/337 (30%), Gaps = 23/337 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I L + L + VL A+ + + + P Y + ++ E A + ++V+ V Sbjct: 19 LLIALAIGFALYAYVGTVLFAIFLYYATRPFY-RLLDRRLEHPNVTATVTILAVVVPMFV 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + E+ ++ + + +LS +S+ + Sbjct: 78 VVGYAGLVALQELDRFLA-ASDLEAYRSALQPYLSIARERNLDRLRRLLTSDTGRSITSV 136 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + S + M+ LF+ RD ++ + + Sbjct: 137 LRRGLPG-----LLERLSTIAGLVFSVLARFFLMLTFLFYLLRDDETLRRWFARSVD--G 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VPSHVALGVIT 248 V + + F+ I + Y V + V L V+ Sbjct: 190 DEQIVSFLEAVDDDLETIFVSNLAIVGVAAAIAAVTYLALNMVASGGAVVGTPVLLAVLI 249 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGN-----IFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +IP G I + +YLL I+ F+ + + L+ Sbjct: 250 GVGTLIPAVGMKIVYVPYGLYLLGLALATPTPIWQPIAFFVLSFTVVDTIPDFFARSLLS 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + G G G GLF+GP+++ L Sbjct: 310 ARSGVHMGLVLLGYFLGTLAFGWYGLFLGPIVVVLAV 346 >gi|119484291|ref|ZP_01618908.1| hypothetical protein L8106_01197 [Lyngbya sp. PCC 8106] gi|119457765|gb|EAW38888.1| hypothetical protein L8106_01197 [Lyngbya sp. PCC 8106] Length = 374 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 5/222 (2%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 ++ Q +P + + + W S P + IL + L A+ Sbjct: 86 IMQGRQLITRLPDLIESGKQQLAEFQAWGLERSLPIDVGILQQKLLVNLQGKAEAIAATS 145 Query: 156 FG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 G + ++ + I +++ F+ DG + + S L P + + + ++ Sbjct: 146 LGLVVGTFNWFIDFILILVIAFYMLLDGERLWDGITSF---LSPKVRYIFTDCLARNLQG 202 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G I+ + + L +++L VP + V I+ +IP ++ Sbjct: 203 FVVGQFILGLFMAVSLTISFFLLKVPFFLLFAVFIGILEVIPFVGATLGIGTVTIIVAFI 262 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + A + L I I D + P ++G L + F Sbjct: 263 DWWLALQVLLVAIIFQQIKDNLVTPRIMGNITGLSPVIIFSS 304 >gi|260599778|ref|YP_003212349.1| hypothetical protein CTU_39860 [Cronobacter turicensis z3032] gi|260218955|emb|CBA34310.1| UPF0118 inner membrane protein yhhT [Cronobacter turicensis z3032] Length = 354 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + IIL ++ P+L AL + P+ + F+ + +A V Sbjct: 19 LQKLAALVIILAGIHAAADVIVPLLLALFLAIVLNPLVTWFMRRGFRRP-----VAITIV 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E ++ + N+ + L + + Sbjct: 74 VFVMLIGLTLLLGVLAASFNEFIALMPKYNKE--------------LTRKLLHLQEMVPF 119 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + E L+ D + FA+ S + +++ + F + + +L Sbjct: 120 MHLHLSPERMLQRMDSDKMVTFATTLMTQLSGAMASAVLLVMTVVFMLFEVRHVPYKL-R 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + R + V L +I++ G+++ L + + GV+ + Sbjct: 179 FALSNPQLHIAGLHRALKGVSHYLALKT-LISLWTGVIIWLGLTLLDIQFALMWGVLGFL 237 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP GA +S I L+ ++ + + + I+ + P ++G + + Sbjct: 238 LNYIPNIGAVLSAIPPMIQALLFNGVYEVVMVGVLFLLVHMILGNIVEPRMMGHRLGMST 297 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 298 MVVFLSLLFWGWLLGPVGMLL 318 >gi|170748680|ref|YP_001754940.1| hypothetical protein Mrad2831_2262 [Methylobacterium radiotolerans JCM 2831] gi|170655202|gb|ACB24257.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 381 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A+ + D +++ + F D + ++ + +R Sbjct: 177 AAAVILGLFDALGNVLVIAFLGLAFAADPKAYRDGAVRFVPPAKRWRASQVLDGAGETLR 236 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G II L + G+ + LG+ ++A +P P+ V + + Sbjct: 237 HWLFGQLIIMAVIFLCTWAGLAFLGIGGALILGLQAGLLAFVPTVGPLVAGLVIVLAALA 296 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + L PF+ + +P F G + GL G+ + Sbjct: 297 SGTKAVIGAIGVYLAVQCLESYGLTPFIQKRALDIPPATIFAGQLILGVIFGLWGIALAL 356 Query: 333 VLMALIAVIWKESIMAIKENKEK 355 LMA+I V+ ++ + +++ Sbjct: 357 PLMAVIKVLLEQLYVEDTLHEQP 379 >gi|323966139|gb|EGB61576.1| gyhhT [Escherichia coli M863] gi|323974884|gb|EGB69995.1| gyhhT [Escherichia coli TW10509] gi|327251111|gb|EGE62804.1| hypothetical protein ECSTEC7V_4098 [Escherichia coli STEC_7v] Length = 349 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|289523976|ref|ZP_06440830.1| putative AI-2 transport protein TqsA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502632|gb|EFD23796.1| putative AI-2 transport protein TqsA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 393 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 100/311 (32%), Gaps = 27/311 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P++ A ++ F P KK +A ++ LF V L F + Sbjct: 83 VMPLVIAWLLSFIFKPALLKLEKKKIPR-----GLAVSLILTLFFVICLLAFTLLYRRIL 137 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 V+ + + + Q + ++ L+ + + Sbjct: 138 PFVNAFPNYYGRLMKIIEEI-------------------GQKTDLPTDLLLEFDLGRRLA 178 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + +++ L F + +++L ++I + Sbjct: 179 PLLFALPGKVITLISNFFLIVVFLVFILLGTPASTERLRRAFSLTTAERVQQIINSISYQ 238 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 I L II+ G+ + A + GV V GV+ ++ IP G+ I+ + Sbjct: 239 IGRYLLTTVIISASTGVAVWIALSVIGVDFAVNWGVLAFVLNFIPYVGSLIASIPPILVA 298 Query: 270 LIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L++ +I A + + + L P +VG + + + L+ G +G Sbjct: 299 LVQFYPDIKPAITTAIVLLVIQMSIGNFLAPKVVGDALNINPIVVLLSLLFWGWLWGGVG 358 Query: 328 LFIGPVLMALI 338 + + ++ Sbjct: 359 AVLAVPIAVVV 369 >gi|282900524|ref|ZP_06308468.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281194577|gb|EFA69530.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 320 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 101/303 (33%), Gaps = 14/303 (4%) Query: 37 ALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A I+ F +P+ + K + T+ +I V + L ++ L + + +L+ Sbjct: 16 AAILAFLLNYPVQ--LLEKARITRTYSVIIVLVITLTLLVILGFTLVPMLVEQTTQLLKN 73 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + L + K L S+ N + I A Sbjct: 74 IPDWVTSSQENLSRLQVL--------ARQKRLHIDFSVVSSQINASVQNILQQIASGAVG 125 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 F L L+I+ +++ F+ G + L + K ++ + F Sbjct: 126 FAGTLLSGLLNIVLVVVLAFYMLIYGDRLWSGLINQLPSYIGLPLSKSLQLN---FHNFF 182 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 L ++A+ + L + VP + +I I ++P + L+ Sbjct: 183 LSQLLLALFMVIALTPIFLFLRVPFALLFAIIIGISELVPVIGATLGIGLVTLLVSLQTW 242 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + I I D L P L+G L L F ++ G GLLG + + Sbjct: 243 WLAFPVAMVAIIIQQIRDNILAPKLLGNFTGLNPLWIFIAILMGFEIGGLLGTLVAVPIA 302 Query: 336 ALI 338 I Sbjct: 303 GTI 305 >gi|325204203|gb|ADY99656.1| putative membrane protein [Neisseria meningitidis M01-240355] Length = 344 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 7 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 65 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 66 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 120 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 179 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 180 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 239 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 240 YLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 299 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 300 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 335 >gi|313668331|ref|YP_004048615.1| integral membrane protein [Neisseria lactamica ST-640] gi|313005793|emb|CBN87247.1| putative integral membrane protein [Neisseria lactamica 020-06] Length = 356 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 111/323 (34%), Gaps = 12/323 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A ++ + P+ K TV V LL L ++ + Sbjct: 33 LTPFAVAAVLAYVLDPLVEWLQKKGFNR---AVASMTVMVFA-----LLLLAALLLIIVP 84 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV + + ++ + + + S+ + + Sbjct: 85 MLVGQFNSMVSRLPQLAGFMQNTLLPLLKDTVGNYVEIDQASIIAWLQAHMGELSNTLKA 144 Query: 151 RF--ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 F R + +++ + + L++F D S + L F + +I+ + Sbjct: 145 WFPVLMRQSSNIVSSIGNLMLLPLLLYYFLLDWQRWSCGISKLVPRRFADTYTRITGNLN 204 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +V+ G ++ + GLV G L G+ S A+G++ I+ +P + ++ Sbjct: 205 EVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMLAGILVFVPYLGAFTGLLLATV 264 Query: 269 LLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L +W + F+ + P +VG I L F L+ + MG + Sbjct: 265 AALLQFASWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFV 324 Query: 327 GLFIGPVLMALIAVIWKESIMAI 349 G+ G L A+ V+ +E + Sbjct: 325 GMLAGLPLAAVTLVLLREGVQKY 347 >gi|300215084|gb|ADJ79500.1| Putative uncharacterized protein [Lactobacillus salivarius CECT 5713] Length = 349 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 126/355 (35%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R+ ++ ++ LY + + +L I F + + K + S + Sbjct: 5 QRFLGNERLRRFTVLLFLVGVLYLARSMMSLILLTFIFSFLVISLNDAIRKKIDIPSKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ + + + + + LV+ +V H G + Sbjct: 65 VIIVYLLMIGGIYLAITIYLPKLVTQTENLVNYIVKFYNHPP---------KGTNDVINM 115 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T+++S +K + G+ I ++ + G ++ I ++ FFF D Sbjct: 116 VTQYISQSDIMKQMR------GGMSIIVKYLANIGT----MGMTFIMALLLSFFFTIDKD 165 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + S + + ++ ++I IIA+ + + +P Sbjct: 166 DLFKFSKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMP 225 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L ++ M+MIP G IS + + G + + + + + L P Sbjct: 226 QLFSLALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVKYIIYIIIMLCVVHALEAYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +LP TF L G+ GL +G + + I I+ + Sbjct: 286 KLMSSRTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 340 >gi|298291114|ref|YP_003693053.1| hypothetical protein Snov_1114 [Starkeya novella DSM 506] gi|296927625|gb|ADH88434.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 374 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 109/322 (33%), Gaps = 16/322 (4%) Query: 5 MLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+ ++ ++ + + L P ++ L + + P+ + K + + Sbjct: 1 MAWHKQVTFWLTVLAAVIAASWLLSSVLLPFVAGLALAYFLNPVTTRLE-KWGVNRLAAS 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++A + + I+ +L + ++ + ++ + R + I + Sbjct: 60 LVAIALTLLIGILLMLLVVPIFGSQLAAFIQRL------PDYIVRLQNMITSEEKTATWL 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLDYCLSIIFMIIALFFFYRD 180 + L + G ++ G + ++ + F+ D Sbjct: 114 RDLVGDNMPSIQQGLNELVSQGATYMLTLIQSLWTGGQALISLFSLLVITPVVAFYILND 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++DS + ++R + + I G +++ + G + + G+ Sbjct: 174 WNHMVEKVDSWLPVKNRPVIRGLARQMDRAIAGFVRGQSLVCLILGSFYAISLSMTGLNF 233 Query: 241 HVALGVITAIMAMIP----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +G I+ I+ IP + V+I + ++ FI L Sbjct: 234 GFVIGFISGIITFIPYVGSLTGLVLAAGVAIVQFFPDYSMIGLVIGIF-VFGQFIEGYIL 292 Query: 297 RPFLVGGPIKLPFLPTFFGLVG 318 P LVG + L + F L+ Sbjct: 293 SPKLVGDSVGLHPVWLMFALLA 314 >gi|320639757|gb|EFX09351.1| hypothetical protein ECO5101_02065 [Escherichia coli O157:H7 str. G5101] Length = 349 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|239831649|ref|ZP_04679978.1| Hypothetical protein OINT_1000858 [Ochrobactrum intermedium LMG 3301] gi|239823916|gb|EEQ95484.1| Hypothetical protein OINT_1000858 [Ochrobactrum intermedium LMG 3301] Length = 340 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 110/325 (33%), Gaps = 23/325 (7%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +++ L++ FAPV+ AL I WPI + I + V+CL + Sbjct: 16 VLIAMLHYGSAVFAPVVFALFIIMLVWPIQRALSLIMPRYVALA--ITFLLVVCLLLGFG 73 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +V V + WL G+ AS L +++ S Sbjct: 74 WLIAWTVGQVGRRIVIDAVRYQLLYEQLRTWLDG--HGIAASVLLSENFS---------- 121 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + R G + I ++ + + ++ L + Sbjct: 122 -------VSWTLRTLQTIGSRLNNTFSFWIVALVYVLLGLAETEEFGARIRQLKDQAAAT 174 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + SR IR + +++I G + WL G+P G + I+ IP Sbjct: 175 AFLRASRSAAAKIRFYMVLRALMSIATGSFVWLLTWLVGLPFAETWGFVAFILNFIPFLG 234 Query: 259 PISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ T + N A +F+ I ++ + P L G I L T F + Sbjct: 235 PLVATLLITAFAFTHFANWQMALMVFIGLNIVQSVIGSVIEPRLTGKTISLSPFATLFSV 294 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 G+ G FIG + + Sbjct: 295 FAWGSLWGVFGAFIGVPITIVALTF 319 >gi|119490891|ref|ZP_01623174.1| hypothetical protein L8106_18482 [Lyngbya sp. PCC 8106] gi|119453709|gb|EAW34868.1| hypothetical protein L8106_18482 [Lyngbya sp. PCC 8106] Length = 339 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 112/343 (32%), Gaps = 24/343 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + +M + +++ +L + P+ A I P+ S + + Sbjct: 1 MQISGTTTKTLMAIIATILVVAALQATRSISMPLAFAFFIAVLVHPLQSWLERRLPRWLS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + V+ + V L L + VP +L + Sbjct: 61 LILVLLLLIGFMGVAVGALTLSAEIIE----------------PKVPEYLDRLQQMGETL 104 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + S P F +GI+ + + A L I ++ L + Sbjct: 105 RSWAEERSIP------IPQFNAQDGINQVTQQAIGGIKTLLSAASLFILIVSLLVLLLLE 158 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +++ + +R L MT+ G++ S ++ GV Sbjct: 159 VNQYQEKVKQAFPSRSSDRIINAVSDTSEKLRRYLLVMTLTCCLTGILTASWCFIWGVDL 218 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G++ ++ +P G+ I+ ++ I + L A+ I+ + P Sbjct: 219 AFVWGLVAFVLNYVPTLGSIIAVIPPTLVAFIFQGVPRGIATLLGLAVIQTILGNFVDPR 278 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L G ++L +V G+ G +G P+ +++I + Sbjct: 279 LQGKTLQLSPFVALVSIVFWGWVWGIPGAILGVPMTISIILMC 321 >gi|38704170|ref|NP_312350.2| hypothetical protein ECs4323 [Escherichia coli O157:H7 str. Sakai] gi|89110538|ref|AP_004318.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|90111597|ref|NP_417931.4| inner membrane protein, predicted membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|157162951|ref|YP_001460269.1| hypothetical protein EcHS_A3673 [Escherichia coli HS] gi|168747032|ref|ZP_02772054.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4113] gi|168753242|ref|ZP_02778249.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4401] gi|168759512|ref|ZP_02784519.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4501] gi|168765837|ref|ZP_02790844.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4486] gi|168772617|ref|ZP_02797624.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4196] gi|168779573|ref|ZP_02804580.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4076] gi|168785295|ref|ZP_02810302.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC869] gi|168797260|ref|ZP_02822267.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC508] gi|170082988|ref|YP_001732308.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188496205|ref|ZP_03003475.1| putative membrane protein [Escherichia coli 53638] gi|194431192|ref|ZP_03063485.1| putative membrane protein [Shigella dysenteriae 1012] gi|194435818|ref|ZP_03067921.1| putative membrane protein [Escherichia coli 101-1] gi|195934968|ref|ZP_03080350.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807622|ref|ZP_03249959.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4206] gi|208811875|ref|ZP_03253204.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4045] gi|208820437|ref|ZP_03260757.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4042] gi|209398386|ref|YP_002272918.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4115] gi|217324479|ref|ZP_03440563.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. TW14588] gi|238902565|ref|YP_002928361.1| putative inner membrane protein [Escherichia coli BW2952] gi|253771697|ref|YP_003034528.1| hypothetical protein ECBD_0267 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163398|ref|YP_003046506.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|254795394|ref|YP_003080231.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256025802|ref|ZP_05439667.1| predicted inner membrane protein [Escherichia sp. 4_1_40B] gi|261224757|ref|ZP_05939038.1| predicted inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254348|ref|ZP_05946881.1| predicted inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|307140157|ref|ZP_07499513.1| inner membrane protein YhhT [Escherichia coli H736] gi|312972261|ref|ZP_07786435.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|84028001|sp|P0AGM1|YHHT_ECO57 RecName: Full=UPF0118 inner membrane protein yhhT gi|84028002|sp|P0AGM0|YHHT_ECOLI RecName: Full=UPF0118 inner membrane protein yhhT gi|85676569|dbj|BAE77819.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|87082271|gb|AAC76499.2| inner membrane protein, predicted membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|157068631|gb|ABV07886.1| putative membrane protein [Escherichia coli HS] gi|169890823|gb|ACB04530.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187771629|gb|EDU35473.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4196] gi|188018316|gb|EDU56438.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4113] gi|188491404|gb|EDU66507.1| putative membrane protein [Escherichia coli 53638] gi|189002228|gb|EDU71214.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4076] gi|189359127|gb|EDU77546.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4401] gi|189364557|gb|EDU82976.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4486] gi|189369883|gb|EDU88299.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4501] gi|189374511|gb|EDU92927.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC869] gi|189380018|gb|EDU98434.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC508] gi|194420647|gb|EDX36723.1| putative membrane protein [Shigella dysenteriae 1012] gi|194425361|gb|EDX41345.1| putative membrane protein [Escherichia coli 101-1] gi|208727423|gb|EDZ77024.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4206] gi|208733152|gb|EDZ81839.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4045] gi|208740560|gb|EDZ88242.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4042] gi|209159786|gb|ACI37219.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4115] gi|217320700|gb|EEC29124.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. TW14588] gi|238862577|gb|ACR64575.1| predicted inner membrane protein [Escherichia coli BW2952] gi|242378995|emb|CAQ33793.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|253322741|gb|ACT27343.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975299|gb|ACT40970.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253979455|gb|ACT45125.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|254594794|gb|ACT74155.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|260447510|gb|ACX37932.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|309703880|emb|CBJ03221.1| putative membrane protein [Escherichia coli ETEC H10407] gi|310334638|gb|EFQ00843.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|315138048|dbj|BAJ45207.1| conserved hypothetical protein [Escherichia coli DH1] gi|315614743|gb|EFU95383.1| conserved hypothetical protein [Escherichia coli 3431] gi|320181967|gb|EFW56873.1| Putative PerM family permease [Shigella boydii ATCC 9905] gi|320191510|gb|EFW66160.1| Putative PerM family permease [Escherichia coli O157:H7 str. EC1212] gi|320645257|gb|EFX14273.1| hypothetical protein ECO9389_01809 [Escherichia coli O157:H- str. 493-89] gi|320650568|gb|EFX19034.1| hypothetical protein ECO2687_04699 [Escherichia coli O157:H- str. H 2687] gi|320661544|gb|EFX28959.1| hypothetical protein ECO5905_02077 [Escherichia coli O55:H7 str. USDA 5905] gi|320666567|gb|EFX33550.1| hypothetical protein ECOSU61_16165 [Escherichia coli O157:H7 str. LSU-61] gi|323934540|gb|EGB30940.1| yhhT protein [Escherichia coli E1520] gi|323939308|gb|EGB35519.1| gyhhT [Escherichia coli E482] gi|323959674|gb|EGB55325.1| gyhhT [Escherichia coli H489] gi|323970073|gb|EGB65348.1| gyhhT [Escherichia coli TA007] gi|326337558|gb|EGD61393.1| Putative PerM family permease [Escherichia coli O157:H7 str. 1044] gi|326344691|gb|EGD68440.1| Putative PerM family permease [Escherichia coli O157:H7 str. 1125] gi|332085331|gb|EGI90503.1| hypothetical protein SB521682_4065 [Shigella boydii 5216-82] gi|332085941|gb|EGI91105.1| hypothetical protein SD15574_4198 [Shigella dysenteriae 155-74] Length = 349 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|148258202|ref|YP_001242787.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146410375|gb|ABQ38881.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 372 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 119/344 (34%), Gaps = 20/344 (5%) Query: 4 TMLNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 ++ I+ ++ + + LY KGFF P++ A ++G P + + Sbjct: 28 PVIKRAEIVAVALVILTAICVTGVLYVAKGFFLPIVMAFVVGTMLSPAANFLERHRVPRG 87 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + I L + L ++ + + + + Sbjct: 88 IGA--------VLIVIAVAAGLAFIIGLISAPVLDWTNRLPELATQLK---AKLHVFDRP 136 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +W + + + L+ D++ F ++ L ++ +R Sbjct: 137 FAMWHEMQAAIGGGSAQAPPSLELPKFDWVQPTIEFLSPTFTEFLL-FFATLVLFIASWR 195 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + G+H +I + + + L +T+I G G+ G A L G+P Sbjct: 196 DLRR--TLIMTFGDHDARLRTLRILNELELHLGNYLLTVTLINTGVGVATGLACALTGMP 253 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + LG + A + IP PI+ V I L+ + L A F+ + Sbjct: 254 NPAGLGALAATLNFIPIIGPIATFCVLIMVGLIAFPTLSGGMVAPLIFAAITFMEGHFVT 313 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P ++G + L L F L G +G F+ L+ + ++ Sbjct: 314 PTIIGRRLALNALAVFIALAFWTWLWGPMGAFLASPLLIVALIV 357 >gi|332140771|ref|YP_004426509.1| hypothetical protein MADE_1006845 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550793|gb|AEA97511.1| hypothetical protein MADE_1006845 [Alteromonas macleodii str. 'Deep ecotype'] Length = 347 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 107/315 (33%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + P ++ I PI + K +L++ + ++ +F Sbjct: 19 LVVVMAGVKAASAIMVPFFLSVFIAIACSPIIRW--TSKFGVPKWLSITFVILLIVVFGF 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L M E +E + + W ++ I Sbjct: 77 LLAGLVGQSMTEFRENLPEYRNKLNTEFA-----------------WVVAKLAEFNIHIN 119 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E A+ F ++ +++ + F + SI ++L Sbjct: 120 RELIASHLDPSTAMSVATNFISGMGGVLSNLFLILLTVIFMLFEADSIPRRLHIAL--AD 177 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P K + + S T++++G G+++G ++ GV + V+ ++ IP Sbjct: 178 PDMKLKHIDKFIRSVNSYLAIKTVVSLGTGVIIGVWLYVMGVDHFMLWAVLAFMLNFIPN 237 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ + ++ A L + I+ + P L+G + L L F Sbjct: 238 IGSIIAALPAVLIAFVQLGPAAAGFAALGFLLVNTIMGNMVEPRLMGKGMGLSTLVVFLS 297 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 298 LIFWGWLLGTVGMLL 312 >gi|327386326|gb|AEA57800.1| hypothetical protein LCBD_2305 [Lactobacillus casei BD-II] Length = 340 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 115/347 (33%), Gaps = 23/347 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F + + L+F + + +L I F + + + +V Sbjct: 2 LFSVFLLLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHIRP------------FVIVV 49 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P+ L G++ ++ G+ + + + Q + Sbjct: 50 PVYILVILGLVYAAVHYVPAIIHQTIGLFNS-------VQNFYNSEAFANNQVMQWVLQS 102 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++ T + ++ L++ I FFF + S+ + F Sbjct: 103 TKSLNLTEQLKTGVTTVLQYAGNIGAMGLTLFVSFILSFFFTIELDSLPAFGQLFLDSPF 162 Query: 197 PAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 Y+K + K I + IA+ ++ +P+ +L ++ ++++ Sbjct: 163 GWYFKDLQYFAMKFINTFGVVMEAQIFIAVVNTVITTITLLFLKMPNTPSLAIMVFLLSL 222 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP GA IS ++I G + + + A + L P + +LP T Sbjct: 223 IPVAGAIISLIPLTIIGYTVGGWQDVLTILIMIAAIHVLEAYVLNPKFMSSRTQLPVFFT 282 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F L+ R G GL +G + + +A +K+ ++ Sbjct: 283 FVVLLVAERLFGTWGLIVGIPIFTFFLDVLGVKKIAGTAHKQSTYAS 329 >gi|198433623|ref|XP_002122006.1| PREDICTED: similar to CG2698 CG2698-PA [Ciona intestinalis] Length = 773 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 90/264 (34%), Gaps = 9/264 (3%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA------SRFGMI 159 + + D+ +++S SL T L++N + + G + Sbjct: 509 LLSRIMDLLNMNEVISWLQENVSALMSLGETVLTILRSNISLILSTVSVVWSAVLNGGTL 568 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGM 218 L+ LS + LF + + +G + P + + + + F Sbjct: 569 ILNLLLSFVIFFTTLFHLLSVSTDQYKPIQMIGAAIKPFFSETPFETAMQDALSGVFGAS 628 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSI-YLLIKGNIF 276 + GL + + G V+ A+ ++P ++ L++GN Sbjct: 629 LKMFGFYGLYTWVNHSMFGANLVYMPSVLAALFGVVPLLTTYWVCIPAALEIWLLQGNPL 688 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A CL ++ + VD + + T + GGV T GL G GP+++ Sbjct: 689 RAICLTVFQFLPTLFVDAAIYKDISSSGGGGHPYITGLAVAGGVYTFGLEGAIAGPLILC 748 Query: 337 LIAVIWKESIMAIKENKEKISSNF 360 + V+ A ++ E +S Sbjct: 749 FLLVVVNMYAAATQKTNENVSRRL 772 >gi|238789129|ref|ZP_04632918.1| AI-2 transport protein tqsA [Yersinia frederiksenii ATCC 33641] gi|238722893|gb|EEQ14544.1| AI-2 transport protein tqsA [Yersinia frederiksenii ATCC 33641] Length = 357 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 110/315 (34%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I+ + P L A+ + P+ + + + T V+ ++ L + Sbjct: 25 LVVIMAGVKAASPIVVPFLLAIFLAIVLNPL-VKLLQRIKIPRTLAIVLLVTIIVLLMAL 83 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L N+ +P++ + M + ++ + S+ + Sbjct: 84 LFSRLGSSL--------------NEFARSLPQYRGMMLEKMRDLQEFSMRFNIEFSVDDI 129 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + ++FI R S L ++ ++ LF R + + D+ Sbjct: 130 MKHVDPSTAMNFITRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKMQLMFDN------ 183 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P I + + + TII+I G+V+ GV G++ ++ IP Sbjct: 184 PEQGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPN 243 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ I L+ +A + + I + P ++G + L L F Sbjct: 244 IGSVLAAVPPIIQALLFNGFADAFAVTCGYILINLIGGNIIDPRMMGRGLGLSTLVVFLS 303 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 304 LIFWGWLLGPIGMLL 318 >gi|126462746|ref|YP_001043860.1| hypothetical protein Rsph17029_1984 [Rhodobacter sphaeroides ATCC 17029] gi|126104410|gb|ABN77088.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 340 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 57/178 (32%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 FAS +++ ++ + D ++ L +L ++ I Sbjct: 125 GGFASTAVSATFGALGNVVIILFIGLYTAVDPGLYARGLRALLAPPLRPRGDEVLAIADG 184 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +R G I G++ WL G+P LG+I A++ IP P+ ++ L Sbjct: 185 TLRGWLGGQIISMTVVGVLTWLGLWLIGIPLAFILGLIAALLTFIPNIGPVLSAVPALLL 244 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + P + + LP + GL+G Sbjct: 245 ALPEGAEQVGLVLAVFLTVQTFESYLVTPLIQKERVALPPALIISAQLLMGVLFGLMG 302 >gi|313900143|ref|ZP_07833643.1| sporulation integral membrane protein YtvI [Clostridium sp. HGF2] gi|312955195|gb|EFR36863.1| sporulation integral membrane protein YtvI [Clostridium sp. HGF2] Length = 358 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 97/306 (31%), Gaps = 13/306 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L +I F P+ + + I + + LF G +K Sbjct: 34 IMPFLIGFLIAFMLRPLIKRLTALSGGHEKLWSSIVILVFYATIGAFVTLLFMKGFAFLK 93 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + V + Q + +L+D G +W + L+++ I Sbjct: 94 DFVEDIPRLYQQNLEP--FLNDTLGN--VESVWKEVDITGAQAIQSFLDGLQSSLYSIIS 149 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKI---- 203 + +F + S+ ++IA FF F + ++ + P +I Sbjct: 150 SLSKHLVSLFTGFASSLPNLLIAFFFAIISSFFFNADYPRIIAFFIRQLPEKGAQIVFTS 209 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISF 262 I + I + L + G+ + + + + AI ++P G Sbjct: 210 RHYFTDTIARFAVAYGKIMLLTFFELTIGLHILGIENALVIAFLIAIFDVLPVLGTGGIM 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + + L + + + ++ + P +VG I L L + G R Sbjct: 270 LPWILISFLNNQVKTGVGLLILY-LVITVIRNIIEPKIVGKQIGLHPLLMLMCMYLGARL 328 Query: 323 MGLLGL 328 G LG+ Sbjct: 329 FGFLGI 334 >gi|326790477|ref|YP_004308298.1| hypothetical protein Clole_1374 [Clostridium lentocellum DSM 5427] gi|326541241|gb|ADZ83100.1| protein of unknown function UPF0118 [Clostridium lentocellum DSM 5427] Length = 385 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 124/335 (37%), Gaps = 13/335 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESST------FLAVIATVSVMCLFIVPLLFLFYYGM 86 P + + + Y+ F++K +++ ++ ++ +F + F+F + Sbjct: 40 PFIWGFALAYILNIPYTYFLTKLFKNNKRDPRYKLKKSLSLIASYLIFFFIIGFIFSMLI 99 Query: 87 LEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHLSHPQSLKILSETFLKTN 144 ++ E ++ + + ++ + +L+DI + +W + SL + + L + Sbjct: 100 PQLGESINIFMANSTEYYQTLQNYLTDIVTKLKLEPSIWNEIQKAIMSLVEVLKGLLPS- 158 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + ++ ++ + L +++ LD+ + K + Sbjct: 159 ----LIGVVTSTASGLVNLLGTLFISVYFLASKETLMSLVTRTLDAFATNKTKTKLKHVL 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + R +G A+ G++ L G P + LG + + +IP P Sbjct: 215 EVTDQTFRGFIIGQLTDALIIGIITFVCSSLFGFPYPILLGFLAGVTNVIPVIGPFIGAV 274 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + +++ A ++ I I + P +VG L L ++ G G Sbjct: 275 PCVLIILMVEPTKAIWYVIFITILQQIDGNFICPKIVGDSTGLDGLWILLAVIVGGGFFG 334 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++G + L A+ +++E + + SS+ Sbjct: 335 VVGCLLAVPLCAVAFKLYEEFLSHRLTTENASSSD 369 >gi|126699652|ref|YP_001088549.1| hypothetical protein CD2035 [Clostridium difficile 630] gi|255307040|ref|ZP_05351211.1| hypothetical protein CdifA_10657 [Clostridium difficile ATCC 43255] gi|115251089|emb|CAJ68920.1| putative sporulation integral membrane protein [Clostridium difficile] Length = 363 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 120/356 (33%), Gaps = 11/356 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----FISKKEES 58 + ++ + + +IL L L + VL + F + + K Sbjct: 8 SYQNKQRFLINFCYLVVILGLLMLLGKYAFSVLLPFVFAFLIASLLNKPVLYISEKLLIK 67 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL---SDIP 114 +A I+ + + + + Y + +KE+ + + + IP+ + ++ Sbjct: 68 RGIVATISVFLFFLIAGIIVSVIGTYLIYGIKEIFHFLPTMFEELVIPLTETVIKEVELF 127 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G + ++ L F+ + + + + L + + I I+A Sbjct: 128 SGSFNFSFIELIEANMPVLMNEMSVFIVSLSNNIVSGITDIVSSVPLLF-MKTIITIVAS 186 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F D +I + + + I +I L + Sbjct: 187 IFIAIDYPTIKRFIVLQIPKNKSYLLAEAKAFTIDTIIKCGFSYLLIFAITFSELYVGFV 246 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + + + + A++ ++P G I L G+ A + L + I Sbjct: 247 IINISYAGIIALFIALLDILPVLGTGSILIPWCIISLFLGDYSMALGIALLYIVITIIR- 305 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + P LVG ++L + ++ G+ G +GLF P+L+A + + + I+ I Sbjct: 306 NIIEPKLVGKHMELHPVLALASMLTGLHFFGFIGLFGIPLLIAFLKKLNDKEIIHI 361 >gi|120555864|ref|YP_960215.1| hypothetical protein Maqu_2954 [Marinobacter aquaeolei VT8] gi|120325713|gb|ABM20028.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 386 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 2/144 (1%) Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 +I + +R M I A+ G++ A+ L GV GV+ I + +P G Sbjct: 227 AARIMNELHHQVRRFLFVMVISALFVGILTWLAFLLLGVEQAALWGVVAGIASGVPYLGP 286 Query: 259 PISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + ++ G + A + L + I L P+L L + F GL+ Sbjct: 287 FLVLVGSGVAAFLQFGELNTAVIVALTSLVITSIQGNLLMPWLTSYVSSLNAVAIFIGLL 346 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G +GL + ++ + + Sbjct: 347 FWGWLWGPVGLIVATPILMIAKSV 370 >gi|159026200|emb|CAO86358.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|159029535|emb|CAO87687.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 392 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 115/323 (35%), Gaps = 9/323 (2%) Query: 31 FAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F +L A ++ F +P+ +++ ++ A++ ++ + +F+ + L + Sbjct: 55 FVILLIAAVLSFLLGYPV--TWLERQGLKRGLAAIVVSLITILIFVAVGITLVPLVFTQA 112 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ V+++ G L M + Q L G Sbjct: 113 QQFVNRLPEWLDSGQRQLMQLDTKIDTMNLPIPISFDGVIAQFNSRLGAELQILAGRS-- 170 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A + + L ++ II F+ I + + + R+ Sbjct: 171 VNLALNLTVFTVVRVLDVLLTIILTFYLLLHSPDIWRSIIQWLPKPVQQPFSLTLRL--- 227 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ F+G I A L L +A+ VP + G++ MA+IP G + V+ L Sbjct: 228 SFQNYFVGQVICATCMALGLVTAFLSIKVPFGLLFGLLIGTMALIPFGGTVGIVTVTALL 287 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 ++ +I A + + IV+ + P ++G L ++ G R GLLG+ Sbjct: 288 ALR-DIGLALQVLAVAVVVQQIVENGIAPRILGSVTGLNPFWVLVSVLTGARVGGLLGVI 346 Query: 330 IGPVLMALIAVIWKESIMAIKEN 352 + + +I + E Sbjct: 347 VAVPMAVMIKEALEVIRQVTPEE 369 >gi|325130277|gb|EGC53045.1| putative membrane protein [Neisseria meningitidis OX99.30304] gi|325136295|gb|EGC58903.1| putative membrane protein [Neisseria meningitidis M0579] gi|325142409|gb|EGC64815.1| putative membrane protein [Neisseria meningitidis 961-5945] Length = 344 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 127/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 7 FAALVWLIFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 65 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + + WL + GG + + + Sbjct: 66 LLLIIVPMLVGQFNNLASRLPQLISFMQNTLLPWLKNTIGG------YMEIDQASIIAWL 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 120 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 179 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 180 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 239 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 240 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 299 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 300 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 335 >gi|114706428|ref|ZP_01439330.1| hypothetical protein FP2506_01550 [Fulvimarina pelagi HTCC2506] gi|114538289|gb|EAU41411.1| hypothetical protein FP2506_01550 [Fulvimarina pelagi HTCC2506] Length = 400 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 114/356 (32%), Gaps = 33/356 (9%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P+ + + ++ LY F PV+ A++ PI + + A Sbjct: 33 PRWAVIGIFFMMLFGGLYLTASFVLPVIIAVLFALVMSPIVRFLRRRLKIWEPVSAFFLV 92 Query: 68 VSVMCLFIV-------PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW----------- 109 + + P+ + + + ++ + Sbjct: 93 IGSLTFLTFGFYMLSDPIANIISNAPEYARAVDKEIRTVQARFQRLQEASENVGEGGTDD 152 Query: 110 -LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 ++ +P +A ++ L N + +P + + + Sbjct: 153 GVNRLPPSPFAQPEPEPENDDEPQEVVVKNPGLVDNAANELPTILASVLFALVFLFFLLA 212 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 G +L L L I+ + + + FL +T+I G G+ Sbjct: 213 -----------SGDMFYAKLVRLMPTLEDKKRALHIAHDIERELSRYFLTITLINTGLGI 261 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWG 285 +G+ W G+PS V G + ++ IP GA V + L + G++ A L Sbjct: 262 AVGTGLWYVGMPSPVVFGALATLLNFIPYLGALFGMGLVGVIALAEFGSLAEAAIPVLIY 321 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I + L P +VG +++ F + G+LG+F+ LM I V Sbjct: 322 LAVTTIEGQFLTPMIVGRRLQMNAAAVFLSVAFWGWIWGVLGMFLAVPLMVAIKVF 377 >gi|210608910|ref|ZP_03288047.1| hypothetical protein CLONEX_00226 [Clostridium nexile DSM 1787] gi|210152827|gb|EEA83833.1| hypothetical protein CLONEX_00226 [Clostridium nexile DSM 1787] Length = 450 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 125/391 (31%), Gaps = 50/391 (12%) Query: 9 QGIMRWMIMFIILVSLYFLKGF-------------FAPVLSALIIGFTSWPIYSSFISKK 55 +G+ ++++ +V + F P++ L+I + PI Sbjct: 47 KGMTAFLVVAASIVFYFAFLRFNGISNIFEKIFQILKPIIYGLVIAYLLNPIVKLVERHL 106 Query: 56 ------------------EESSTFLAVIATVSVMCLF---IVPLLF-----LFYYGMLEM 89 S F A+I +V V+ ++P L+ L +M Sbjct: 107 TPFLEKKLKKKETAHKIGRGSGVFAALIFSVFVIVALCNMLIPELYKSIRDLIVTLPEQM 166 Query: 90 KELVSKVVLANQHGIPVPRWLSDI-PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + L +I G E W K Q+ ++S + Sbjct: 167 NSWAQDMNAFLISNSTLDTMLKNIITEGTDTVENWLKTDLLQQANTLMSNLTVGVI---- 222 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 ++ + I + LF + + +L + I++ Sbjct: 223 ------NVVSEIMNVLIGFIVSVYVLFSKELFSGQCKKIVYALMKPDHANMTLHITKKSN 276 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 ++ +G I + G++ A + +P + + VI + +IP P S Sbjct: 277 EIFGGFIIGKIIDSAIIGVLCFIALSIMKMPYTLIVSVIVGVTNVIPFFGPYIGAIPSTI 336 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ ++ I I + P ++G L F ++ G G +G+ Sbjct: 337 LIMIAEPIQGLYFAIFILILQQIDGNIIGPKILGDSTGLSAFWVVFSILLGGGLFGFVGM 396 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G A++ I + I E K+ +S+ Sbjct: 397 IMGVPTFAVLYYIAQMFINQKLERKKLPTSS 427 >gi|325663709|ref|ZP_08152113.1| hypothetical protein HMPREF0490_02854 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470202|gb|EGC73435.1| hypothetical protein HMPREF0490_02854 [Lachnospiraceae bacterium 4_1_37FAA] Length = 357 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 103/319 (32%), Gaps = 20/319 (6%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + + ++ P A ++ + P+ + + + + +A + ++ + L FL Sbjct: 30 IGIKYILPLVLPFFCAFLVAYLLRPLVRNIHAHTKLNQGAVAGGLLLIILGVAGTALWFL 89 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRW-------LSDIPGGMWASELWTKHLSHPQSLK 134 + + + + + G S T+ + ++++ Sbjct: 90 GSALVQQFCYFIEHYGFYAGKMERFLDQCCRSMSRVFGMEAGELESLFVTRMATIAENIE 149 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L N ++ G+ + + I +++ F + + Sbjct: 150 RQFVPKLMANSWGYVRTIIEVAGVGIIIFVS--IILLVNDFDKLK---------EKASHS 198 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ KI + + + II + + P + LGV+ + + Sbjct: 199 IGYRHFVKILKRIFHMGGMFLKAQLIIMSVIAALCTVTFLFLKNPYALLLGVLIGFLDAL 258 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G + ++I +G A I + L P L+G + +P + Sbjct: 259 PVLGTAVVLYPLAIVQAFQGRFLFAAVYVGLSVICNLTRE-FLEPKLIGEHLGIPAIMVL 317 Query: 314 FGLVGGVRTMGLLGLFIGP 332 + G+R G+ G+ GP Sbjct: 318 VTVYMGIRLFGVSGVITGP 336 >gi|220919916|ref|YP_002495219.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] gi|219952336|gb|ACL62727.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 386 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 106/333 (31%), Gaps = 11/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + ++ +LY + P + AL++ P+ + ++ A + ++ Sbjct: 46 ILVLSLLAVVYTLYLGRELILPTVLALVLKLLLGPVMRILHERLRLPNSLAAAL----LI 101 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + + + + + L + ++L+ Sbjct: 102 LVVFGAIAGVGFTISIPASVWIQRAPESLSLLKEKLAVLHHPLDLLQQGLHAIENLTG-- 159 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I E +T A + +I LFF G + + + Sbjct: 160 --TIGQEGQNQTITTRPASGLAGYLATGTATILVRFFTTMILLFFLLASGDRLLRGFIEV 217 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +I+ + I L +T++ G+ G A W G+ + + G + Sbjct: 218 LPSFSNKRQAVEIAHEIGTNISGYLLTITMMNTLVGVATGLAMWACGLGTPLLWGATAFL 277 Query: 251 MAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP P++ + +L + A + +T+ P L+ L Sbjct: 278 LNYIPILGPLAGLVIFFVAGVLSLDWPWYALMPVGLYLLIHIAEGETITPMLLAKRFTLN 337 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L G+ G + L+A++ ++ Sbjct: 338 PVLVIVSLFFWHMLWGVPGALLAVPLLAMLKIV 370 >gi|332162121|ref|YP_004298698.1| putative transport protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606171|emb|CBY27669.1| putative transport protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325666351|gb|ADZ42995.1| putative transport protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864024|emb|CBX74103.1| aI-2 transport protein tqsA [Yersinia enterocolitica W22703] Length = 353 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 111/315 (35%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I+ + P L A+ + P+ S K +A V ++ + ++ Sbjct: 20 LVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKSLEKIKIPR-----TLAIVLLVTIIVL 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + LF + E + P++ + M + + + S+ + Sbjct: 75 LMALLFSRLGSSLNEFARSL----------PQYRGMMLEKMRDLQEFAMRFNIEFSVDDI 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + ++FI R S L ++ ++ LF R + + D+ Sbjct: 125 MKHVDPSMAMNFITRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKMQLMFDN------ 178 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P I R + + TII+I G+V+ GV G++ ++ IP Sbjct: 179 PEQGNAILRRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPN 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ I L+ +A + + I + P ++G + L L F Sbjct: 239 IGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGLSTLVVFLS 298 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 299 LIFWGWLLGPIGMLL 313 >gi|161506667|ref|YP_001576617.1| putative permease [Lactobacillus helveticus DPC 4571] gi|160347656|gb|ABX26330.1| putative permease [Lactobacillus helveticus DPC 4571] Length = 344 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 114/339 (33%), Gaps = 17/339 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + R+++ II+ LY ++ +L I + + + T V+ Sbjct: 9 KNNIPLRRFVVFLIIVAFLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYVPKMPTGAIVV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T ++ L L+++ + M LV ++ + + +A+ +K Sbjct: 69 VTYLII------LALLYFFITVYMPMLVGQISKMVKSVMAFYESDESSRLLSYATHYISK 122 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + Q+ + + F A+ G + + +S+I + S Sbjct: 123 NEIITQA----------KHAMTFAFHTATSIGTLTITTFMSLILSFFYTIELKKMREFTS 172 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IAI + + +P VALG Sbjct: 173 LFVKSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAIMKMPQIVALG 232 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I++++P G IS +SI G I +F+ I I L P + Sbjct: 233 LMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFVMIMIIHAIEAYVLNPKFMASK 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ G GL +G + + + Sbjct: 293 TELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLN 331 >gi|77463912|ref|YP_353416.1| hypothetical protein RSP_0340 [Rhodobacter sphaeroides 2.4.1] gi|77388330|gb|ABA79515.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] Length = 340 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 56/178 (31%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 FAS +++ ++ + D + L +L ++ I Sbjct: 125 GGFASTAVSATFGALGNVVIILFIGLYTAVDPGLYRRGLRALLAPPLRPRGDEVLAIADG 184 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +R G I G++ WL G+P LG+I A++ IP P+ ++ L Sbjct: 185 TLRGWLGGQIISMTVVGVLTWLGLWLIGIPLAFILGLIAALLTFIPNIGPVLSAVPALLL 244 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + P + + LP + GL+G Sbjct: 245 ALPEGAEQVGLVLAVFLTVQTFESYLVTPLIQKERVALPPALIISAQLLMGVLFGLMG 302 >gi|89895286|ref|YP_518773.1| hypothetical protein DSY2540 [Desulfitobacterium hafniense Y51] gi|89334734|dbj|BAE84329.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 370 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 96/287 (33%), Gaps = 6/287 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + A I P+ F+ + S AV+A V + + + E+ Sbjct: 56 LLPFIIAFFIALLLEPLVLRFMQGLKTSRPIAAVLALVLAILGIGSIVFLIVVRLYTELS 115 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L + L + + + +++ I S G + Sbjct: 116 DLGNSFPSYGYLVGFFNNILGTVDNFIQLNPQIQISINNATQGLIDSLQGWALTGSKVLL 175 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F S + ++ ++A FF + +L + + +SR + Sbjct: 176 NFISA----LPGVFIVLVVSVVATFFMSASYPGVKNFFSNLVPRKWKPGARSVSRALGAA 231 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + I+ G++L G P +G I+A++ ++P G + F + L Sbjct: 232 VVGFVRAEAILISVTGIILTVGLLWMGNPYAFTIGFISALLDLLPIVGTGMIFVPWIVGL 291 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I G++ L + I ++ + L P ++ I + L T + Sbjct: 292 FILGSVSEGIKLLIIYLIA-TVIRQILEPKVMSQNIGIHPLATIISM 337 >gi|294783199|ref|ZP_06748523.1| permease [Fusobacterium sp. 1_1_41FAA] gi|294480077|gb|EFG27854.1| permease [Fusobacterium sp. 1_1_41FAA] Length = 364 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 129/331 (38%), Gaps = 8/331 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+F ++ A+ I PI K + + ++ V V+ + I+ L + + Sbjct: 38 GYFMTLIMAIFIAILLEPIEKYLKKKSKINDVLAISLSIVFVVLIVIIMSLIVIPEIISS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K L ++ + + + +++ + T+ L+ + I + T +N +F Sbjct: 98 LKVLNDMYPAISEKVLTIGKDVTNYLAEKNIYTVDTQELNDSFTNFISNNT---SNIKEF 154 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKIS 204 + F L + ++I F D ++ + L++L + +F Y Sbjct: 155 VFAFVGGLVNWTLGFT-NLIIAFTLAFLILLDKKNLMKTLENLIKIIFGVKNTPYVMNKL 213 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 ++ + S G I++ GL + + G P ++ + MIP I Sbjct: 214 KLSKDIFISYVSGKIIVSFIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIFGGI 273 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+ +L++ L + I + + P ++G + L ++ G Sbjct: 274 VAFFLILLVAPIKTLILLIAIIISQLVDGFIVGPKIIGNKVGLSTFWVMVSMIIFGNLFG 333 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++G+F+G ++++I + + + + ++ ++ Sbjct: 334 IVGMFLGTPILSIIKLFYVDLLKRAEQGGKE 364 >gi|163749672|ref|ZP_02156918.1| hypothetical protein KT99_14855 [Shewanella benthica KT99] gi|161330485|gb|EDQ01443.1| hypothetical protein KT99_14855 [Shewanella benthica KT99] Length = 365 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 100/323 (30%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ + K LAV+ + Sbjct: 18 KGFAIMAFIVVILAGVKAASPIVVPFVLSAFIAVICNPVIGAMTRFKVPRP--LAVLLLM 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + + E + W Sbjct: 76 VFIVMMGLWLAQIVGSSINEFSNQLPHYRDQLVEQFG-----------------WIVQKL 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ I E L + ++ +I+ + F + ++ ++L Sbjct: 119 QTLNIIITKEQILAYFDPGIALSMTTNMLTGVGGVMANLFLIILTVVFMLFESQTLPRKL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T++++ G+++G + GV + GVI Sbjct: 179 HFALDD--PEMRMQQIDKFLHSVNQYMVIKTLVSLATGVIIGFGLAIIGVDYALLWGVIA 236 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A L ++ + P +G + L Sbjct: 237 FLFNYIPNIGSIIAAIPSVLLAFIQLGPTAAGVTALLYFCTSMVMGNLIEPRYMGKGLGL 296 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 297 STLVVFLSLIFWGWLLGSVGMLL 319 >gi|55981999|gb|AAV69392.1| putative membrane protein [Edwardsiella tarda] Length = 140 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 44/118 (37%), Gaps = 1/118 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ L+ ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 21 LFIALLIISCLWVVQPFILGFTWASMVVIATWPVLIWLQNHLWGKRWIAVVLMTLLLLLL 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHP 130 F++P+ + + ++ A +P WL +P G W ++ Sbjct: 81 FVLPIGMVITSLIGNAGPILDWAANARSWQMPQMEWLQTLPLIGAKLYASWQGLMNEG 138 >gi|197106263|ref|YP_002131640.1| hypothetical protein PHZ_c2802 [Phenylobacterium zucineum HLK1] gi|196479683|gb|ACG79211.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 355 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 104/339 (30%), Gaps = 19/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + ++ L A++ + + + A V Sbjct: 12 RLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLPRPWALTAAVVG 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L L++ L + P + G + S L L Sbjct: 72 LTAATWGTLYLFGREAALQLAALSELL----------PNAWRALQGELSRSVLGAYILDD 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +SL+ + I + R + + ++ A + + + L Sbjct: 122 LRSLQ---------HADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYLAYNPSTYLGGLL 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L +++ + K + +G I + G+ G WLAGVPS +ALGV+ Sbjct: 173 KLVPARGRQRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAG 232 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P P+ + + + + + P ++ ++LP Sbjct: 233 LGQFVPVVGPMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPM 292 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T F ++ +G LG+ L + V+ + + Sbjct: 293 AVTLFAVLAMGVLLGPLGVLFATPLAVVAYVVVRMIYVE 331 >gi|171057363|ref|YP_001789712.1| hypothetical protein Lcho_0672 [Leptothrix cholodnii SP-6] gi|170774808|gb|ACB32947.1| protein of unknown function UPF0118 [Leptothrix cholodnii SP-6] Length = 353 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 111/330 (33%), Gaps = 14/330 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P ++A ++ + P + + + ++ ++M + +L Sbjct: 29 PVLTPFVTAAVLAYALEPAVERLVRLRVPRLLAVVLVVLAAIM---------VALSVLLL 79 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + ++S+ + + IPV + W + S+K +L N D+ Sbjct: 80 IVPILSQELPLLREQIPVLAARLNDTVVPWLRGYGIRVSLDIGSIKTFVVKYLSANVDDW 139 Query: 149 IPRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + S G L + + + + LF+ D + ++L SL A Sbjct: 140 LATVVSSARIGGSFVLALIGNAVLVPVVLFYLLADWSHLIERLRSLVPQRHAAAIHGFMS 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V+ G ++ + + A LAG + +GV T + +P + Sbjct: 200 ECDEVLGQYLRGQLLVMLVLAIYYTVALSLAGFDLALPVGVFTGLGIFVPYLGFGLGALL 259 Query: 266 SIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + +++ + L + I L P LVG I L + F L+ Sbjct: 260 ATLAGALQFASVYGLLAVLLIYGVGQLIESFYLTPRLVGERIGLHPIAVIFALLAFGHLF 319 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +G+ I AL V + A ++ Sbjct: 320 GFVGVLIALPAGALALVALRRLRSAYLDSP 349 >gi|260437554|ref|ZP_05791370.1| putative permease [Butyrivibrio crossotus DSM 2876] gi|292810186|gb|EFF69391.1| putative permease [Butyrivibrio crossotus DSM 2876] Length = 451 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 55/399 (13%), Positives = 131/399 (32%), Gaps = 51/399 (12%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYF----------LKGFFA-------PVLSALIIGFTS 44 + L + + ++ FI++ + L GFF + ++ + Sbjct: 17 KRFKLPNKYLTIGLVAFIVVAACILFYYLFFEDKSLFGFFKISIQSVRAFIIGAVLAYLL 76 Query: 45 WPI-------YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 PI +K + + +++ C I+ + ++ + E++ V+ Sbjct: 77 KPICAIFENWLGKAFAKLKNRKRAKNLQINIAIGCTAILFVALVYVLFAAIIPEVIDSVM 136 Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF------------LKTNG 145 +++ VP WL +I W ++L + + +K F + Sbjct: 137 TISEN---VPGWLQNI--SDWLTKLAKNNANMQAQIKDFFTNFSDKVVEFLNEFLINGGK 191 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK---- 201 + + + L I+ ++ + + + Q L +F W Sbjct: 192 TEVVISGVTNSLKSILVLLKDILVGGVSCIYILHERKKFAVQGKMLVYSIFKGKWADKVM 251 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPI 260 + + K+ G I +I G++ L +P + + V I +IP G I Sbjct: 252 EEIKYTDKMFSGFINGKIIDSIIIGILCFIVTSLCRIPYALLISVFVGITNIIPFFGPFI 311 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL--VG 318 ++ +L+ + + L P ++G L F + G Sbjct: 312 GAIPSALIVLMI-SPIKCLYFIIIIVAIQQFDGNILGPKILGNSTGLSSFWVLFSITFFG 370 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G G+ +G + A++ I + + + + + Sbjct: 371 GI--WGFAGMVLGVPVFAVLYDIIRRLVKKGLDKRNRTE 407 >gi|323164806|gb|EFZ50598.1| hypothetical protein SS53G_4926 [Shigella sonnei 53G] Length = 349 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 69 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLELMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|188589338|ref|YP_001921708.1| permease [Clostridium botulinum E3 str. Alaska E43] gi|188499619|gb|ACD52755.1| permease [Clostridium botulinum E3 str. Alaska E43] Length = 370 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 106/333 (31%), Gaps = 8/333 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P + ALI + PI F + + S + + + I+ F + + Sbjct: 43 MSPFIYALIFAYILNPIMIIFEKRFKFSRGKSILATYAIITGIIIMFFFFTIPSLVDSIA 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTNGIDFI 149 ++ +V + + W++ SEL L L + + + Sbjct: 103 SIIKEVPNYMET---IQEWINTAIKNPKLSELIVDAGLVDKIELLSIKMGNFTITILQGM 159 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDG--FSISQQLDSLGEHLFPAYWKKISRIV 207 + + + + L +DG S+ + + + K Sbjct: 160 LGYLLSLTGNLVKIVFGFLIAVYVLSD--KDGLLHSLKTITYIILKEKKASELIKACNTY 217 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 K+I I + GL+ + P + L +I AI MIP P V Sbjct: 218 NKMIGVYIGTKAIDSAIIGLIALIGLIIVKAPYALLLSIIVAITNMIPYFGPFIGEIVGA 277 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I + A +F+ + L P L+G + + G++ G G +G Sbjct: 278 GVCIFVSPMKALVVFILLLLIQQFDAWYLDPKLIGAKVGVKPFWIIMGVIIGGAFWGPIG 337 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + +A I + + + K + + Sbjct: 338 MLLASPTLATINIYYIRLVKFYKSKNPSLFKDL 370 >gi|161614094|ref|YP_001588060.1| putative transport protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551544|ref|ZP_02345298.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|161363458|gb|ABX67226.1| hypothetical protein SPAB_01833 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205323625|gb|EDZ11464.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 344 Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 114/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ L ++ L +L N+ +P++ S + + E W Sbjct: 66 SLLIVIIVMLMVLLLAYLGTSL--------------NELARTLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV + V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAVLDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|229550145|ref|ZP_04438870.1| permease [Enterococcus faecalis ATCC 29200] gi|293383073|ref|ZP_06628991.1| putative membrane protein [Enterococcus faecalis R712] gi|293387774|ref|ZP_06632318.1| putative membrane protein [Enterococcus faecalis S613] gi|307271146|ref|ZP_07552429.1| hypothetical protein HMPREF9498_03232 [Enterococcus faecalis TX4248] gi|307291349|ref|ZP_07571233.1| hypothetical protein HMPREF9509_01658 [Enterococcus faecalis TX0411] gi|312900626|ref|ZP_07759923.1| hypothetical protein HMPREF9510_01424 [Enterococcus faecalis TX0470] gi|312907337|ref|ZP_07766328.1| hypothetical protein HMPREF9492_01657 [Enterococcus faecalis DAPTO 512] gi|312909954|ref|ZP_07768802.1| hypothetical protein HMPREF9493_01028 [Enterococcus faecalis DAPTO 516] gi|312952368|ref|ZP_07771243.1| hypothetical protein HMPREF9504_01491 [Enterococcus faecalis TX0102] gi|229304731|gb|EEN70727.1| permease [Enterococcus faecalis ATCC 29200] gi|291079738|gb|EFE17102.1| putative membrane protein [Enterococcus faecalis R712] gi|291082844|gb|EFE19807.1| putative membrane protein [Enterococcus faecalis S613] gi|306497580|gb|EFM67113.1| hypothetical protein HMPREF9509_01658 [Enterococcus faecalis TX0411] gi|306512644|gb|EFM81293.1| hypothetical protein HMPREF9498_03232 [Enterococcus faecalis TX4248] gi|310626365|gb|EFQ09648.1| hypothetical protein HMPREF9492_01657 [Enterococcus faecalis DAPTO 512] gi|310629752|gb|EFQ13035.1| hypothetical protein HMPREF9504_01491 [Enterococcus faecalis TX0102] gi|311289912|gb|EFQ68468.1| hypothetical protein HMPREF9493_01028 [Enterococcus faecalis DAPTO 516] gi|311292107|gb|EFQ70663.1| hypothetical protein HMPREF9510_01424 [Enterococcus faecalis TX0470] gi|315030015|gb|EFT41947.1| hypothetical protein HMPREF9496_01115 [Enterococcus faecalis TX4000] gi|315033766|gb|EFT45698.1| hypothetical protein HMPREF9500_00121 [Enterococcus faecalis TX0017] gi|315036852|gb|EFT48784.1| hypothetical protein HMPREF9501_00162 [Enterococcus faecalis TX0027] gi|315147861|gb|EFT91877.1| hypothetical protein HMPREF9497_01368 [Enterococcus faecalis TX4244] gi|315155891|gb|EFT99907.1| hypothetical protein HMPREF9503_01658 [Enterococcus faecalis TX0043] gi|315578453|gb|EFU90644.1| hypothetical protein HMPREF9511_01513 [Enterococcus faecalis TX0630] gi|315579978|gb|EFU92169.1| hypothetical protein HMPREF9506_03134 [Enterococcus faecalis TX0309A] Length = 294 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 8/221 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG I R+ G + L + +S I FFF + ++ + F +++ Sbjct: 74 QNGASMILRYIQDIGAVGLSFVMSFILS----FFFMIEKKQMADFSKLFLKSDFDWFFQD 129 Query: 203 ISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I K + + IA+ ++ A + G +L ++ I++++P Sbjct: 130 IYYFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLPSLAIMIFILSLVPVAGV 189 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I +S +G + + + I L P + +LP TF L+ Sbjct: 190 IISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPKFMSSKTELPIFYTFVILLV 249 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 R G+ GL +G + + K + + + N Sbjct: 250 SERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 290 >gi|329571447|gb|EGG53134.1| hypothetical protein HMPREF9520_02828 [Enterococcus faecalis TX1467] Length = 294 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 8/221 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG I R+ G + L + +S I FFF + ++ + F +++ Sbjct: 74 QNGASMILRYIQDIGAVGLSFVMSFILS----FFFMIEKKQMADFSKLFLKSDFDWFFQD 129 Query: 203 ISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I K + + IA+ ++ A + G +L ++ I++++P Sbjct: 130 IYYFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLPSLAIMIFILSLVPVAGV 189 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I +S +G + + + I L P + +LP TF L+ Sbjct: 190 IISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPKFMSSKTELPIFYTFVILLV 249 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 R G+ GL +G + + K + + + N Sbjct: 250 SERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 290 >gi|302187133|ref|ZP_07263806.1| hypothetical protein Psyrps6_12310 [Pseudomonas syringae pv. syringae 642] Length = 356 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APVL+ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSVLERLRLPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLVFLLVLVPLLWHQMITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|187735225|ref|YP_001877337.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] gi|187425277|gb|ACD04556.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] Length = 370 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 110/323 (34%), Gaps = 16/323 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + II L K P++ + + S+P+ + F S+ +LAV TV + +V Sbjct: 21 VIIITAGLQAGKPVLLPIVLSGFLAIVSYPLTTFFKSRLCF-PHWLAVTFTVIMDFGILV 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L +L Y ++ + V+ ++ + + ++ + + Q L L Sbjct: 80 GLGYLAQYLGQDLAKTVT-----VKYQPLMMEKIHELRAFLIEQDWNNLADQMLQELPDL 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 NG + G + + + +I+ FF G + + + Sbjct: 135 L------NGQRIVAFSTGVMGQLASMLTFTTLILILMTFFL---GEAPRFRANINKLGHN 185 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 + ++ + T I+ GL+ + V + G++ + IP Sbjct: 186 SDTGIRKFSKALAGVQKYLIIKTFISAVTGLLAFLLCYYMNVDFPLLWGIVAFALNFIPT 245 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ I+ ++ ++ + + + + L P L+G + Sbjct: 246 FGSIIAAIPPTLLAMLLISPTAGIIVAGGYLVINTALGNCLEPMLLGRQFGIVTSMVLLS 305 Query: 316 LVGGVRTMGLLGLFIGPVLMALI 338 ++ G +G+ + + LI Sbjct: 306 VIFWGWVWGPIGMLLAVPITMLI 328 >gi|254787526|ref|YP_003074955.1| transporter [Teredinibacter turnerae T7901] gi|237683517|gb|ACR10781.1| transport protein [Teredinibacter turnerae T7901] Length = 343 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 113/334 (33%), Gaps = 15/334 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + ++ + ++ +Y + P++ ++ PI + S Sbjct: 1 MKDLRWMLSCAFLILVCFVVYITRSLVLPIIVSMFFALLLNPIVNYLNRFAVPRS----- 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +++V + ++ L F + M + V +V ++ ++ G + + Sbjct: 56 LSSVLTVLTLVIALGLTFSLLVSPMDKWVKQVSKISEDISQKIDEVAKPLTGEAEQKWYQ 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ + + F + +I+ FFF G S+ Sbjct: 116 LSKDRGEPMSQKIKSQVSVAFMQVATNFTPVV-------LFQALTVIVLTFFFLTHGQSL 168 Query: 185 SQQLDSLGEHLFPAY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + I + + + L +++I G GL + A +L GV + Sbjct: 169 YRNVVATLPTFRHRRIFVTIGKSIQSDVSYYVLIISVINTGLGLSVAGALYLLGVEDALL 228 Query: 244 LGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G I +P + + G+ + A + I + + P ++ Sbjct: 229 WGAFAGIFNFVPYLGLFVVGVIITGVGFIQFGDNWQALYPVMAFLFLNGIESQVVTPTVL 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 G ++ L L +G++G+ + ++ Sbjct: 289 GQRFQINPLIVILWLFVFGWLLGVVGMILAVPIL 322 >gi|204927440|ref|ZP_03218641.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322782|gb|EDZ07978.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 344 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 117/328 (35%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMTRCRIPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VIA + ++ + ++ ++ L Y + EL +P++ S + + E W Sbjct: 62 VIAVLLLIVIIVMLMVLLLAYLGTSLNELAR----------TLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|330836258|ref|YP_004410899.1| hypothetical protein Spico_0287 [Spirochaeta coccoides DSM 17374] gi|329748161|gb|AEC01517.1| protein of unknown function UPF0118 [Spirochaeta coccoides DSM 17374] Length = 416 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 106/339 (31%), Gaps = 19/339 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +P+ ++ +IL L P++++L + P+ K +I Sbjct: 26 RSPRTFFGVFLVIVILFVLKVASEVTLPLVTSLFLFLLCNPLLDRL-DKLRTPRWLSTLI 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +FI F+ ++ L S V L+D+ + + Sbjct: 85 VMLLLFLVFIGAGWFMVSTVDTLIRHLPSYANRFILIDNYVTGKLTDMLNIDPDTTVL-- 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L N I + + + I +FF + S+ Sbjct: 143 -------------ALLDINWIQLAMNSLTSLSGKLMTVAKDAALIYIFIFFLLLERQSLV 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L + + V + + + I++ G++ A L + V G Sbjct: 190 PKLRAALPTDNGRRLMIMLERVNRQVSKYLVLKLFISVVTGVMYYFAALLTHLDFPVLWG 249 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGN---IFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+ ++ IP + T + + + I + + ++ + P L G Sbjct: 250 VLACVINFIPAIGSVVVTTLVVLMSILQFFPIWPQVIYVAVLMISIEMVMGNIIDPRLQG 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L G++G+ + L ++I ++ Sbjct: 310 VQLNLSPFVILVSLSLWGYIWGIMGMLLAVPLTSVIQIV 348 >gi|308067414|ref|YP_003869019.1| hypothetical protein PPE_00627 [Paenibacillus polymyxa E681] gi|305856693|gb|ADM68481.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 335 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 4/217 (1%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F+ T + + M ++ II FF + I++ Sbjct: 108 DRNQWNETIIEFMDTLNVQRLFEPGLSAVMKVSQLGTQLLVSIILSLFFLMEKSYITRFT 167 Query: 189 DSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++K+ R+ +I++ ++ A W+ G P+ + L Sbjct: 168 ATFVDSKLGWFFKEVGHFGRMFLGTFGKVLEAQLLISLINCILTTIALWIMGFPNLLGLA 227 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I ++ ++P G IS + + G I L + + I L P L+ Sbjct: 228 LIIFVLGLVPVAGVFISLAPLGLIAFSVGGINYVIYLVILIVVIHAIEAYFLNPKLMSSK 287 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LP TF L+ +G+ GL +G L + Sbjct: 288 TNLPIFFTFVVLIFSEHLIGIWGLIVGIPLFVFFLDL 324 >gi|224502735|ref|ZP_03671042.1| hypothetical protein LmonFR_09479 [Listeria monocytogenes FSL R2-561] Length = 346 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 119/360 (33%), Gaps = 25/360 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP TF L+ G+ GL +G + + I + +N+ + + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILEVRNAEDLKNERYLDA 343 >gi|298290162|ref|YP_003692101.1| hypothetical protein Snov_0146 [Starkeya novella DSM 506] gi|296926673|gb|ADH87482.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 346 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 113/338 (33%), Gaps = 26/338 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ + + +++ + APV AL + WP+ + A Sbjct: 2 SARTNRILLGICTVVLAGGAIFLARPVIAPVAFALFVMALVWPLQDRLQRRLPG---LAA 58 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T++V L + + + +G+ + RWL G A Sbjct: 59 MAITLAVTILAVFVVGYATVWGLSQTG-----------------RWLVTNAGRFQALYAE 101 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T L + I F G + +++ MI + + Sbjct: 102 TAAWLEGHGLYSAGTLADTFSASWLIGTFQGLAGRVNGMLGFAVVTMIYVMLGLL-EADI 160 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + GE + S R+ + T++++ GL + + G+ +A Sbjct: 161 VRDKLLAAGE--AGGRLVRASAATAAKFRTYMMVRTVMSVLTGLFVWAVTAALGLDLALA 218 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ + IP P+ L G+ A +F+ + F + P + Sbjct: 219 FGVMAFALNYIPFIGPLVATLLPTFFALAQFGSWEAAVLVFVAMNVIQFFSGSYIEPRVA 278 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALI 338 G + + + G+ G FIG P+++A + Sbjct: 279 GRALAMSPFLVLLSVFFWAFMWGIAGAFIGVPLVIAAL 316 >gi|291521293|emb|CBK79586.1| Predicted permease [Coprococcus catus GD/7] Length = 449 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 114/322 (35%), Gaps = 13/322 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESST----------FLAVIATVSVMCLFIVPLLF 80 +P L A +I + P+ + + ++A V V+ + L F Sbjct: 68 LSPFLIAFLIAYFINPLVNRIDHILFSRTASQKFAKLHKFLSLLLAYVIVIGFIALVLTF 127 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLSHPQSLKILSET 139 + + + EL+ + + L+ P +A + T + + P ++ S Sbjct: 128 VIPQIVESILELIRQSSSLYDTIMTNLNLLNERYPNIDFAYIIDTINNALPNAI--NSVQ 185 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T+ + I ++ L+ + + +R + + + +L + Sbjct: 186 AVMTDIVPMIYNAGMSIISWIINIILAFVISCYLMSSKHRIIHGMKRIIYALFDQKTAYK 245 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + +G + ++ G++ + + + + +I + MIP P Sbjct: 246 VIFTIKECNHIFGQYIIGKALDSLIIGIICFVLMCILHLQYALLISIIVGMTNMIPYFGP 305 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + +L+ + A + + L P ++G L + F + G Sbjct: 306 FIGAIPGLIILLIISPKQALIFLILIFLLQQFDGTILGPKILGDSTGLSPIWIIFAITVG 365 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 T G++G+F+G ++A++ + Sbjct: 366 GATCGVVGMFLGVPIIAVLVYL 387 >gi|238916040|ref|YP_002929557.1| hypothetical protein EUBELI_00073 [Eubacterium eligens ATCC 27750] gi|238871400|gb|ACR71110.1| Hypothetical protein EUBELI_00073 [Eubacterium eligens ATCC 27750] Length = 356 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 113/330 (34%), Gaps = 7/330 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ ++ L + P + A E T A I V + Sbjct: 19 AVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLLREKKTLAASIVVTMVTLI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + LL++ Y E+K+ ++ + + K Sbjct: 79 ILSVLLYVGYMAFRELKDFIANFDENINS----LDGQFKLVCCRIDGWIKLKEGCSYAFF 134 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + +G + + + +C+ + ++ F + ++ S E Sbjct: 135 EKCKGIIIDGDGQQMFFTIMRKHSVPVITWCVMAVAGLVVCFIGTIYAAAGIEKYRSWRE 194 Query: 194 H-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + +F + + +I F II +V +A+ + G P + LGV+T I+ Sbjct: 195 NTIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGNPYAILLGVLTGIID 254 Query: 253 MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P G ++ L+ G++ NA L + + F+ + + +G + + Sbjct: 255 ALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVRE-IMESKCMGDRMGIAPFT 313 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G+ G++G +GP+ +I + Sbjct: 314 MLAVIYIGILVYGVVGFILGPISYCIIKAL 343 >gi|239616654|ref|YP_002939976.1| protein of unknown function UPF0118 [Kosmotoga olearia TBF 19.5.1] gi|239505485|gb|ACR78972.1| protein of unknown function UPF0118 [Kosmotoga olearia TBF 19.5.1] Length = 688 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 80/217 (36%), Gaps = 15/217 (6%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK--- 202 ++ IP AS I + I F+F L L+P +++ Sbjct: 478 LEKIPNIASETFTIVFFVVIG---SIYTSFYF--------AFFKRLAPKLYPRQYRRIAA 526 Query: 203 -ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 R + ++ L + IA+ G+ +G G+ + +G AI ++P I Sbjct: 527 NFLRELHGNMKRYILSILFIALIVGITVGLLIKFLGLGYSLLIGFWAAITNLVPVVGVIF 586 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I L+ + +F+ I + + L+G ++ + ++ + Sbjct: 587 EIVPIILLIAAQPSLSGLIIFVIALIAIHSAAFIIFLKLMGDYNRVNPVMVILLVLFMGQ 646 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+LG F+ + L+ +WK E++ ++ Sbjct: 647 LLGILGAFLAAPVAILLKQLWKHFFEPWLESENSVNE 683 >gi|256422377|ref|YP_003123030.1| hypothetical protein Cpin_3362 [Chitinophaga pinensis DSM 2588] gi|256037285|gb|ACU60829.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 367 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 119/339 (35%), Gaps = 15/339 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + + + +I+ P+ A+++ P+ + + +A Sbjct: 9 NARLAYTLLCIILIIYVARLGHELIIPLAFAMLVSIMLLPMANQLEKWRFSR-----GLA 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +V+ LF++ LL + +M V+ Q + L + + + Sbjct: 64 AFTVIFLFVIMLLGILLLLAAQMGSFVADFPQLQQQLLTSLNSLQQWINVKFHIDTARQM 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 Q + + + +IF+ + + +L F Sbjct: 124 DYLEQMAMGTLGSATGFISSTLLSLSSLLIFVIFVLLYSFFLLLYRSLIF---------T 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L + +I+ G+ I + +V + W+ GV LG+ Sbjct: 175 FLIRLFREKHRDKLLDVVMQTRYIIKGYVSGLMIEMLVVAVVNCAMLWIFGVKYATLLGI 234 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPI 305 + A+ +IP T + + L + + A+ G + + +D L P ++G + Sbjct: 235 MAALFNLIPYLGIYVATIICMLLTLTNSSLAASIQVGAGLLLVHFLDSNILLPRIMGSKV 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+ L T G+V G G+ G+F+ +A++ ++++ Sbjct: 295 KINALVTILGVVSGNLIWGVPGMFLAIPFIAILKIVFEH 333 >gi|227891477|ref|ZP_04009282.1| integral membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866624|gb|EEJ74045.1| integral membrane protein [Lactobacillus salivarius ATCC 11741] Length = 351 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 127/355 (35%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R+ ++ ++ LY + + +L I F + + K + S + Sbjct: 7 QRFLGNERLRRFTVLLFLVGVLYLARSMMSLILLTFIFSFLVISLNDAIRKKIDIPSKLI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ + + +++ + LV+ +V H G + Sbjct: 67 VIIVYLLMIGGIYLAITIYLPKLVIQTENLVNYIVKFYNHPP---------KGTNDVINM 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T+++S +K + G+ I ++ + G ++ I ++ FFF D Sbjct: 118 VTQYISQSDIMKQMR------GGMSIIVKYLANIGT----MGMTFIMALLLSFFFTIDKD 167 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + S + + ++ ++I IIA+ + + +P Sbjct: 168 DLFKFSKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMP 227 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L ++ M+MIP G IS + + G + + + + + L P Sbjct: 228 QLFSLALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVKYIIYIIIMLCVVHALEAYVLNP 287 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +LP TF L G+ GL +G + + I I+ + Sbjct: 288 KLMSSRTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 342 >gi|90419553|ref|ZP_01227463.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90336490|gb|EAS50231.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 351 Score = 66.0 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 111/330 (33%), Gaps = 11/330 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++ +LY F PV+ AL+ P+ + + A V + Sbjct: 4 IFFILLFGALYLTASFVLPVIIALLFALVMSPVVRFLRRRLKIWEPISAFFLVVGALVTM 63 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + +Q V + + E + + Sbjct: 64 VLGFYMLSDPITNIVNDAPRYAAAVDQELRSVQERFARLEAAQQNVE--QAAARNAPNDG 121 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 E +K G S+ F ++ LFF G Q+L Sbjct: 122 QPDEVVVKNPG------LLDNVTTAAPQIVASVGFSLVFLFFLLASGDLFYQKLVRAMPT 175 Query: 195 LFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L I+ + + + +T+I + GL +G+ W G+P+ + G + ++ Sbjct: 176 LSDKKRALNIAHEIERELSRYLFTITLINVTLGLTIGTLLWWVGMPTPIIFGALATLLNF 235 Query: 254 IPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + F I L G++ NA L + + + P +VG +++ Sbjct: 236 IPYIGALIGMFLVGVIALAEFGSLSNALAPVLVYLACTTVEGQLVTPMIVGRRLEMNAAA 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G++G+F+ +M + V+ Sbjct: 296 VFLSVAFWGWIWGVVGMFLAVPVMVALKVL 325 >gi|330941878|gb|EGH44605.1| PerM family membrane protein [Pseudomonas syringae pv. pisi str. 1704B] gi|330975308|gb|EGH75374.1| PerM family membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRMPEVAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|325845516|ref|ZP_08168806.1| putative membrane protein [Turicibacter sp. HGF1] gi|325488470|gb|EGC90889.1| putative membrane protein [Turicibacter sp. HGF1] Length = 385 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 119/323 (36%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 F+ GF L I+ F ++ FI ++S +++ ++ +F V + F+ Sbjct: 50 FIIGFIIAYLINFILKFYEDRVFKKFIKGSKKSLRGVAVILSYLTASLIFYVFIQFVVPQ 109 Query: 85 GMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + LV+ + + + + L++ L L+ + + T L Sbjct: 110 LVESITGLVNDIPRYLYDMKVILEQTLNETDISPEYMTLINDKLTEITNWVLQLVTNLLP 169 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FAS I L +S+ ++ FF + + ++ + Sbjct: 170 IIGGIVMAFASSVWNIILGIIISVYLLVDKEKFFALGKKVVVALFNDKHANIILNLANRT 229 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + K I G I + G++ + +P + + VI I +IP P Sbjct: 230 NLTFGKFIG----GKIIDSAIIGVLTFIILTIFKMPYSLLISVIIGITNIIPFFGPFIGA 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S +++ + A + + I + P ++G I + F ++ + Sbjct: 286 IPSAIIILFISPIKAVWFGVIILVIQQIDGNIIGPKILGDSIGISAFWILFAILVAGKLF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESI 346 GL+G+ IG + ALI I K+ I Sbjct: 346 GLVGMIIGVPMFALIYSIVKDVI 368 >gi|15806207|ref|NP_294912.1| permease [Deinococcus radiodurans R1] gi|6458923|gb|AAF10755.1|AE001967_8 permease, putative [Deinococcus radiodurans R1] Length = 444 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 60/165 (36%) Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + K + ++ + G L V + + Sbjct: 191 LVNGVLGAVPPRHRLPAARALAQILKQLGGWGRATVLVMLVTGSCTALGLMLLKVDNWLI 250 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++ A+ ++P PI T S+ + + L+ + + L PFL+GG Sbjct: 251 FGILAALGELVPNIGPIVATIPSVLFAAADDPQKGLYVALFVLVFQQVSGFVLGPFLLGG 310 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 KL L G++ G++G F+ + +I I++E + Sbjct: 311 AGKLHPLSVTVGVLLFGSVFGIVGAFLTVPFLIIIKAIYQEFYLQ 355 >gi|270291439|ref|ZP_06197661.1| permease [Pediococcus acidilactici 7_4] gi|304385152|ref|ZP_07367498.1| permease [Pediococcus acidilactici DSM 20284] gi|270280285|gb|EFA26121.1| permease [Pediococcus acidilactici 7_4] gi|304329346|gb|EFL96566.1| permease [Pediococcus acidilactici DSM 20284] Length = 350 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 121/357 (33%), Gaps = 19/357 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + W + +L+ +Y L+GF + +L +I F + + + +I Sbjct: 9 QKKSVQLWTTLAALLLIVYLLRGFMSQILLIVIFSFVAHVGIKNIRKYLHVNQPLGTLIF 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ V F ++K + + + A ++ I + Sbjct: 69 YSVLLAFAAVVFSFTASMLYDQLKGIPALIGQAINSDAFNNKYFQGI-----------IN 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L +G++ + R + + LS++F + Y Sbjct: 118 EIAKNTTAVKGSQHLAMSGLNQLGRIGIAAEHVMIALFLSLVFNLT-----YNHLREFGH 172 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + R ++ + II ++ W+ G+P + + + Sbjct: 173 AILHSRYQGLFNLVYYLLRKYVLILGTVIETQLIICSINTGLMVIGLWIIGIPKLLLMAI 232 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I ++ +IP G IS +SI + + + A+ F L P L+ G Sbjct: 233 IVFVLGLIPVAGVLISLIPLSIVAFSANGLVSVVEVLALVAVIHFFESYFLHPRLMAGAT 292 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW--KESIMAIKENKEKISSNF 360 LP TF L+ G + +G GL +G +A + K K KE I F Sbjct: 293 DLPVFVTFITLIIGAKMIGTWGLIVGIPTVAFFIDLLGIKIKRRRPKNPKEAIEEEF 349 >gi|229818722|ref|YP_002880248.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] gi|229564635|gb|ACQ78486.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] Length = 364 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 103/343 (30%), Gaps = 19/343 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + + +L L+G ++ A + P + A +A + Sbjct: 2 GVVAVFVGILSWYALGSLQGLGVNLVIAFFVALALEPAVVWLVRH-GWRRGAAAGVALLG 60 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + V L + ++ +LVS + V + + G + + Sbjct: 61 SIIVIAVVLALFGNLFVQQLIQLVSNL-------PDVYATIQEWVEGQFGVVVPDSDDLI 113 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q+L+ + + A G + + +++ ++ G + Sbjct: 114 RQALEQWGDD---------VASGALAVGAGIVGGLFAASVILLVAYYLLAAGPKFRASIC 164 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ I + ++A + G P + L V T Sbjct: 165 RWLTPNRQEEVLRMWEITQVKVSDFINTRIVLAALSTTFTFVFLLIMGTPYALPLAVFTG 224 Query: 250 IMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P G I + L I + + + + P + +++ Sbjct: 225 VVSQFVPTIGTYIGGALPVVVALAAQGIGYGLAVTAFIVGYQQVENLIFSPKVSARALEM 284 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +F ++ G LG F+ + A I I + + Sbjct: 285 NPAVSFVAVLAFGAVFGPLGAFLALPIAATIQAIGNTYMRRHE 327 >gi|168819237|ref|ZP_02831237.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197249301|ref|YP_002146564.1| putative transport protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213004|gb|ACH50401.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205343801|gb|EDZ30565.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086041|emb|CBY95815.1| UPF0118 membrane protein HI0338 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 344 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 114/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ L ++ L +L N+ +P++ S + + E W Sbjct: 66 SLLIVIIVMLMVLLLAYLGTSL--------------NELARTLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + PA + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PAEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|330989400|gb|EGH87503.1| PerM family membrane protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRMPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGALLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|237798975|ref|ZP_04587436.1| permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021829|gb|EGI01886.1| permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 298 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 109/292 (37%), Gaps = 14/292 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 15 LALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVVVFGL 66 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 L L ++ + L ++ + + WL +P L + Sbjct: 67 FTLVLMTLLLVLVPMLAKQLFRLYELAPQILDWLQHSAMPWVQAKFGLADGFWKFDKIKA 126 Query: 135 ILSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 127 AISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 186 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 187 RQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 246 Query: 254 IPGGAPISFTAVSIY---LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +P + ++ G+++ + I + L P LVG Sbjct: 247 VPYMGFVIGIGAALIAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVG 298 >gi|152972348|ref|YP_001337494.1| PerM family permease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896937|ref|YP_002921682.1| putative PerM-family permease [Klebsiella pneumoniae NTUH-K2044] gi|262040540|ref|ZP_06013781.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330000595|ref|ZP_08303741.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] gi|150957197|gb|ABR79227.1| putative permease (PerM family) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549264|dbj|BAH65615.1| putative PerM-family permease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|257167906|gb|ACV49727.1| putative transport protein [Klebsiella pneumoniae] gi|259042133|gb|EEW43163.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537967|gb|EGF64143.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] Length = 349 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 113/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + IIL ++ +L AL P+ + FI + F + ++ Sbjct: 14 LLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRR-GVRRPFAITLVVTAM 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L L + L + + + +L + Sbjct: 73 LVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFL----------------- 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + + +A+ SI+ +++ + F + + +L Sbjct: 116 -NLHINPERMLRRMDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L +I++ GL++ GV + GV+ + Sbjct: 174 FALNNPRLHIAGLHRALKGVTHYLALKT-LISLWTGLIVWLGLLAMGVQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G+ IS + L+ I+ + + ++ + P ++G + + Sbjct: 233 LNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLVWGWLLGPVGMLL 313 >gi|168235560|ref|ZP_02660618.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735679|ref|YP_002114495.1| putative transport protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711181|gb|ACF90402.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291058|gb|EDY30411.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 344 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 113/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVAQRMT-RCRIPRVIAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ L ++ L +L N+ +P++ S + + E W Sbjct: 66 SLLIVIIVMLMVLLLAYLGTSL--------------NELARTLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|183980476|ref|YP_001848767.1| transmembrane protein [Mycobacterium marinum M] gi|183173802|gb|ACC38912.1| conserved transmembrane protein [Mycobacterium marinum M] Length = 389 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 99/310 (31%), Gaps = 13/310 (4%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + + + + L F+ ++ + +L +V + +WL Sbjct: 64 WLDARGLPRGAAVSLVLLGGFSILGGILTFVISQFIVGLPDLAYQVEHSIDSSR---KWL 120 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P + ++ + ++L + A + + + + Sbjct: 121 IEGPPHLRREQIDNAGNAAIEALHNNQAK---------LTSGAISTAATITELLTAAVLV 171 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L FF G +I Q + + R + ++A+ + +G Sbjct: 172 LFTLIFFLYGGRNIWQYVAKIIPAHVRDRAMAAGRAGYGSLIGYVRATFLVALTDAAGVG 231 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + GVP + L I + A IP GA IS + L+ + A Sbjct: 232 TGLAVMGVPLALPLASIVFLGAFIPLIGALISGLLAVVVALLAKGLVYALLTLALLITVN 291 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+P ++G + + L + G G++G + +A + + + Sbjct: 292 QLEAHLLQPLVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMRVLLAED 351 Query: 350 KENKEKISSN 359 + + Sbjct: 352 PIAEAQQQDQ 361 >gi|71735665|ref|YP_273787.1| PerM family membrane protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556218|gb|AAZ35429.1| membrane protein, PerM family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 108/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + AV Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRM--PELAAVGL 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ F+ + + + P L+ + H Sbjct: 73 VFTL---------FIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|282895571|ref|ZP_06303705.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281199411|gb|EFA74275.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 358 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 99/282 (35%), Gaps = 10/282 (3%) Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++++ + ++ ++ L G++ + + ++ +P W+S + A W Sbjct: 66 ILAIVGVLLLTIVMLGAIGVILLPLIFQQLNELINI---LPAWISSGTQQLQAFLDWAAT 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFS 183 I T L + I F + D + L++I I+ + +G Sbjct: 123 QQDLPVNIIGIATQLLEKISNQIQSFTGKILSFAFDTIGFLLNLILTIVLTIYLILNGEK 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L K ++ + ++ F+G + G+ + + +P + Sbjct: 183 LWDGLYGWLPTYLGV---KARALLKEDFQNYFIGQATLGAVLGVTVTLTFIALKIPPSLI 239 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + ++ P G I VS+ L+ N + A + L I + P L+G Sbjct: 240 IWNYHWFFSLFPFGTGIGIGIVSL-LIALENFWQAVEVALIAVTIDQINSNIVAPRLLGN 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L+ G + G+LGL I + + I Sbjct: 299 LTGLNPVWVVISLLVGAKLGGVLGLLIAIPIASFIKDFADIW 340 >gi|242373168|ref|ZP_04818742.1| permease [Staphylococcus epidermidis M23864:W1] gi|242349119|gb|EES40720.1| permease [Staphylococcus epidermidis M23864:W1] Length = 361 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 114/331 (34%), Gaps = 15/331 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS-VMCLFIVPLLFLFYYGMLEM 89 F P L + + + P + K + +++ ++ + + + F+ + + Sbjct: 41 FLPFLISGFLFYICLPFQNLLE--KWGFPRWASILTIFIGLIAIIAIVVSFIAPIIISNI 98 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + + + + + + T ++ T + +N + +I Sbjct: 99 NNLIKQTPALQKEAEHLINF--SLKQMDKLPDDVTHRINKAVRSMGDGVTSILSNSVTYI 156 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F S +I + L + +D + + + + + + Sbjct: 157 TSFIST--------VFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFVVDLLKDLNF 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 ++S G +++ G++L Y + G+P L + + +IP G +SF +I Sbjct: 209 TLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPGLSFAPAAIL 268 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 +I G + + + + + P ++G + + L ++ G + Sbjct: 269 GIIDG-PTTFIWVCIVTLVAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLI 327 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A++ + + +K +SN Sbjct: 328 LIAVPLYAVLKTLVSNIFKYRQRIIDKANSN 358 >gi|325128242|gb|EGC51127.1| putative membrane protein [Neisseria meningitidis N1568] gi|325134534|gb|EGC57179.1| putative membrane protein [Neisseria meningitidis M13399] Length = 344 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 10/336 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ ++ L P A ++ + P+ KK + ++ V + L + Sbjct: 7 FAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWL-QKKGLNRASASMSVMVFSLILLLA 65 Query: 77 PLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + L S++ L + WL + GG + + + Sbjct: 66 LLLIIVPMLVGQFNNLASRLPQLIGFMQNTLLPWLKNTIGG------YVEIDQASIIAWL 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T +N + R G + +++ + + L++F D S + L Sbjct: 120 QAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRR 179 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ +P Sbjct: 180 FAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVP 239 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTF 313 + ++ + L +W + F+ + P +VG I L Sbjct: 240 YLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVI 299 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 300 FSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 335 >gi|306816182|ref|ZP_07450320.1| inner membrane protein YhhT [Escherichia coli NC101] gi|305850578|gb|EFM51035.1| inner membrane protein YhhT [Escherichia coli NC101] Length = 349 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 114/323 (35%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 12 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ + + Sbjct: 67 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEML 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 113 PFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + R + V L + ++ G+++ L G + V+ Sbjct: 173 R-FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGIIVWLGLELMGAQFALMWAVLA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P GA IS I +L+ I+ + + ++ L P ++G + + Sbjct: 231 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 291 STMVVFLSLLIWGWLLGPVGMLL 313 >gi|283798475|ref|ZP_06347628.1| putative sporulation integral membrane protein YtvI [Clostridium sp. M62/1] gi|291073733|gb|EFE11097.1| putative sporulation integral membrane protein YtvI [Clostridium sp. M62/1] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 106/344 (30%), Gaps = 13/344 (3%) Query: 13 RWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVI 65 + +++ + +Y F P +A + P + + + F I Sbjct: 10 KALVVIAVTAGVYVSFKYFLPLFLPFAAAYLTALILRPTAAWLERRLQFRLFGRRFSVPI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L I+ L + L + M Sbjct: 70 GMIGGIELVIL-TALLGAALFYGGRRLFEEANQIANQIPAWIDSFDHWLTSMCRQVEAFC 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L ++ E L+ ++ + + M+ FF S+ Sbjct: 129 RLRDGVLVQAAREMLLQAASALKKMTMSTLVVNSVAAFTFCVEVMVAVAVFFIASVLSLQ 188 Query: 186 QQLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + +F + SR + + II + + P + Sbjct: 189 EMDELRRRRRQSMFSREFALFSRRLVMTGNTWLRTQLIIMFITSCLCILGLVMIRNPYCI 248 Query: 243 ALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG+ I+ +P G S+ LL++ + L + +V + L L+ Sbjct: 249 LLGLGIGILDALPLFGTGAVLVPWSLILLVQKQWYEGIVLAGL-FLVCCLVREFLEARLM 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G + L L T + G++ G+LG+ +GP+ + +I + +E Sbjct: 308 GDGMGLSPLETLAAIYVGLKLFGILGVLLGPIGLLIIEDLVEEY 351 >gi|28871103|ref|NP_793722.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato str. DC3000] gi|213969676|ref|ZP_03397811.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato T1] gi|301384802|ref|ZP_07233220.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato Max13] gi|302131950|ref|ZP_07257940.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854353|gb|AAO57417.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato str. DC3000] gi|213925484|gb|EEB59044.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato T1] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 108/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APVL+ L++ F + + Sbjct: 15 DEEAVVLAVLLFVAFTLVLTLGGMLAPVLAGLVLAFLMHGLVGLLERLR----------- 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + +V LF+ + + + P L+ + H Sbjct: 64 MPEVAAVGVVFTLFIGALLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHVI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + + + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWSDQFIYLMIAHGVIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|295397889|ref|ZP_06807951.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563] gi|294973869|gb|EFG49634.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563] Length = 340 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 106/316 (33%), Gaps = 8/316 (2%) Query: 34 VLSALIIGFTSWPIY---SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L A + + P+ + T+ ++ + + + F+ + + +++ Sbjct: 1 MLGAALAFILNLPLKFFEKHMTKLVGKYHTWFRIVGILFGYLIIAGVIAFIIFLVVPDLQ 60 Query: 91 ELVSKVVLANQHGIPVP-----RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E + + I + +++SD P + + + + Sbjct: 61 ETLGSFISQVPAEINLLYNKINQYISDNPQILETVNQLDVDTNQLRDQLFSIVQSFTSGI 120 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D A + ++IIF LF + + + + + Sbjct: 121 LDTTFSLAGNLVNGIFNAFIAIIFGTSILFKKETLTRQFKKIIYGTMPKHWANFTVNLGT 180 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + G A+ +++ + P +++ V+T MA++P I V Sbjct: 181 EANQTFGQYVSGQVTEAVILLVLVFIGMTIFNFPFTLSISVLTGAMALVPIYGAIMGGVV 240 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +L+ ++ A ++ + + + P +VGG + LP + F + GL Sbjct: 241 GFFLIAVVDVVQAIWFIIFIIVVQQVEGNIIYPRVVGGSVGLPVIWVLFSVTVSGAIFGL 300 Query: 326 LGLFIGPVLMALIAVI 341 G+ + + AL + Sbjct: 301 AGMLLSVPIFALCYKL 316 >gi|288933145|ref|YP_003437204.1| hypothetical protein Kvar_0261 [Klebsiella variicola At-22] gi|290511947|ref|ZP_06551315.1| inner membrane protein yhhT [Klebsiella sp. 1_1_55] gi|288887874|gb|ADC56192.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] gi|289775737|gb|EFD83737.1| inner membrane protein yhhT [Klebsiella sp. 1_1_55] Length = 349 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 113/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + IIL ++ +L AL P+ + FI + F + ++ Sbjct: 14 LLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRR-GVRRPFAITLVVTAM 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L L + L + + + +L + Sbjct: 73 LVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFL----------------- 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + + +A+ SI+ +++ + F + + +L Sbjct: 116 -NLHINPERMLRRMDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLR- 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L +I++ GL++ GV + GV+ + Sbjct: 174 FALNNPRLHIAGLHRALKGVTHYLALKT-LISLWTGLIVWLGLLAMGVQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G+ IS + L+ I+ + + ++ + P ++G + + Sbjct: 233 LNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLVWGWLLGPVGMLL 313 >gi|157145858|ref|YP_001453177.1| putative transport protein [Citrobacter koseri ATCC BAA-895] gi|157083063|gb|ABV12741.1| hypothetical protein CKO_01609 [Citrobacter koseri ATCC BAA-895] Length = 366 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 118/328 (35%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL I P+ + + Sbjct: 29 TLNGLKLVIMLGMLVIILTGIRFSADIIVPFILALFIAVVLSPLVQRMVRLRIPR----- 83 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+A ++ + ++ ++ L Y + EL +P++ S + + E W Sbjct: 84 VLAVSILIGIIVMGMVLLLAYLGTSLNELAR----------TLPQYRSSLVVPLKNIEPW 133 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L S+ L + + + ++ SI +++ + F + Sbjct: 134 LQRLGIGVSVDELVKYIDPNAAMTLVTNLLAQLSNAMS----SIFLLLLTVVFMLLEVPQ 189 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + P + + + T I+I G+V+ L V Sbjct: 190 LPGKLQQMMAR--PVEGMAAIQRAIDSVSHYLVLKTAISIITGVVVWGMLALLEVRFAFV 247 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ +L+ +++A + I + L P ++G Sbjct: 248 WGLLAFALNYIPNIGSVLAAIPPIAQVLVFSGLYDALVVLTGYLIINLVFGNILEPRIMG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 308 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 335 >gi|300785432|ref|YP_003765723.1| hypothetical protein AMED_3535 [Amycolatopsis mediterranei U32] gi|299794946|gb|ADJ45321.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 375 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 99/322 (30%), Gaps = 17/322 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 V AL + + P S ++++ V L + + Sbjct: 70 LVLVGLALFLAIGAEPAVSWLVTRRFPR-WLAVTTVFVVAFGAVGGFLAAAIPVIVEQAT 128 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV + + +L + + S L Sbjct: 129 ALVKQAPEYLREAQDHNTFLGRLNERFHLQQAIESAFSSGGGLT---------------- 172 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 G + + +++ +F D I + L H I + Sbjct: 173 SGVLGAGKAVFNVVTDTLVVVVLTIYFVADLPRIRATMYRLIPHSRRPRAILIGDDIFSK 232 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + LG +++ G++ + GVP L + A++ +IP + + + Sbjct: 233 VGGYVLGNLAVSVIAGVLTLVWLLIFGVPYAALLAIAVAVLDLIPVIGSVIGGVLVSLVA 292 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + ++ + + D L P ++G +K+P L T ++ G +G++G + Sbjct: 293 LTVSLPVCLATVGFFVVYRLAEDYLLVPKIIGNVLKVPALVTVVAVLLGGALLGIIGALV 352 Query: 331 GPVLMALIAVIWKESIMAIKEN 352 + A I ++ +E + + Sbjct: 353 AIPVAAAILLLVEEVLYPRLDQ 374 >gi|94967586|ref|YP_589634.1| hypothetical protein Acid345_0555 [Candidatus Koribacter versatilis Ellin345] gi|94549636|gb|ABF39560.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 380 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 114/345 (33%), Gaps = 12/345 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + + L Y K + ++++ F P+ F + + Sbjct: 34 LRKMQKTQTTCLFILALATGLGLAYVAKMVLVVLFVSILVAFVLAPVVD-FGVRFGVPRS 92 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ A ++ + + G+ M++L + G RW Sbjct: 93 LASLFAVFLLIGVIYGITFMSYSKGVDFMQDLPKYSRRIREVGQ---RWERR---AEAFR 146 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + K +++ D + G IF +I F+ FF Sbjct: 147 RSTQDIVPQSEDDKRAVTIRQQSSLSDTVTTALGSVGEIFF----TISFIPFLAFFMLSW 202 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L + ++ +IRS +G ++ + +V + L GVP Sbjct: 203 QEHVRSATVMLFKMENRNTAYVTLGLMSSMIRSFLVGNLLVGLFVSVVSMIIFGLLGVPF 262 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G I+ ++M+P G ++ I + ++ + + L P Sbjct: 263 FYFVGFISGYLSMVPYLGIVLALIPPVITGMGVMSLEKLVVIIVSILSLHLFAMNVLYPK 322 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++G ++L L L+ G +GL + + A I ++ Sbjct: 323 VLGKRLQLNPLTVTIALLFWGWLWGAMGLILAIPVTAAIKIVLDH 367 >gi|297571682|ref|YP_003697456.1| hypothetical protein Arch_1124 [Arcanobacterium haemolyticum DSM 20595] gi|296932029|gb|ADH92837.1| protein of unknown function UPF0118 [Arcanobacterium haemolyticum DSM 20595] Length = 376 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 108/330 (32%), Gaps = 9/330 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ I++ L + F V A ++ P + +A +S LF Sbjct: 41 IVISAIVLILGSVYQVFLGVFLAFVLTAVLLPAVNWLSHFMP--RALATAVAVISGFALF 98 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + ++ + E +L + + + + G + + ++ Sbjct: 99 GGLIAYVVSSILHEWNDLARQFSHGVDNIMRLLT-----DGSLPFTLERSQVFDVLSKAL 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + AS + + + + + F G S+ +L Sbjct: 154 QQGTQYAQNHAGEIAQTVASNASQVAIILTI-LALAVFITVFLLASGASMWAWFIALLPS 212 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + G IIA+ G + WL +P L V+ + + Sbjct: 213 RKQERVNAAAEAGWTAFSGYAAGTVIIAVTNGGLSFIFLWLLDLPLAAPLAVLVMLGTFV 272 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P GAPI+ L + + L A I L+P ++G + + + Sbjct: 273 PLVGAPIAMFVAMFVGLATDGLSMFIIIGLGIAGIGQIEGHLLQPLIMGKKVSVHPVAVA 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G GL+G I L+A+I +++ Sbjct: 333 VGVSAGGFAGGLMGAVIAIPLIAVIWSVFR 362 >gi|330968867|gb|EGH68933.1| PerM family membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRMPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|320327801|gb|EFW83809.1| PerM family membrane protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330877413|gb|EGH11562.1| PerM family membrane protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRMPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLMLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|257483914|ref|ZP_05637955.1| PerM family membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320325204|gb|EFW81271.1| PerM family membrane protein [Pseudomonas syringae pv. glycinea str. B076] gi|330894762|gb|EGH27423.1| PerM family membrane protein [Pseudomonas syringae pv. mori str. 301020] gi|331013155|gb|EGH93211.1| PerM family membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRMPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|123441926|ref|YP_001005909.1| putative transport protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088887|emb|CAL11694.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 353 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 109/315 (34%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I+ + P L A+ + P+ + K + T V+ ++ L + Sbjct: 20 LVVIMAGIKAASPIVVPFLLAIFLAIVLNPL-VKLLEKIKIPRTLAIVLLVTIIVLLMAL 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L N+ +P++ + M + + + S+ + Sbjct: 79 LFSRLGSSL--------------NEFARSLPQYRGMMLEKMRDLQEFAMRFNIEFSVDDI 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + ++FI R S L ++ ++ LF R + + D+ Sbjct: 125 MKHVDPSMAMNFITRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKMQLMFDN------ 178 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P I R + + TII+I G+V+ GV G++ ++ IP Sbjct: 179 PEQGNAILRRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPN 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ I L+ +A + + I + P ++G + L L F Sbjct: 239 IGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGLSTLVVFLS 298 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 299 LIFWGWLLGPIGMLL 313 >gi|56697039|ref|YP_167401.1| hypothetical protein SPO2176 [Ruegeria pomeroyi DSS-3] gi|56678776|gb|AAV95442.1| membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 370 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 91/318 (28%), Gaps = 23/318 (7%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 GF P+ A ++ I + + + V+ + + + Sbjct: 50 GFLIPLALAFLVYVLVTAISDRVHAATGAPEWLTTLAGIIVVLAGLFLMIAVIGGQATQF 109 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + S +Q V L G + +L GID Sbjct: 110 ARAMASYENAFDQAVTRVAALL-----GEQITAFLRDNL----------------IGIDL 148 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 S G ++ + F + L + + ++ + Sbjct: 149 SALTRSAMGSATSLLNTFLLVSLYVAFLLVERRVLGIKLLLAARDPQLGRDMSQVMEAIS 208 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT--AVS 266 ++S T +++ + + L G+ V+T + IP I Sbjct: 209 HNLQSYLGVKTFVSLLTAGISYVVFTLLGLEFAETWAVLTFALNFIPSIGSIVAVIFPAL 268 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L+ I + + F++ L P L+G + + L GL+ Sbjct: 269 VSLVQFDTITPFLVIVFFCGTVQFLIGNFLDPALLGRSLNMSTFMVILALTFWTAVWGLI 328 Query: 327 GLFIGPVLMALIAVIWKE 344 G F+ L + ++++ Sbjct: 329 GAFLSVPLTVCLLIVFRH 346 >gi|312869643|ref|ZP_07729792.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094840|gb|EFQ53135.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 347 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 114/340 (33%), Gaps = 32/340 (9%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R+ ++ +I+ +L+ ++ +L I+ + + + + + + Sbjct: 14 VRRFAVLAVIIFALWMMRSMMNMILFTFILTYI---VVNWVHLVRRWLPKLSPAVVVIIT 70 Query: 71 MCLFIVPLLFLFYY----GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 L ++ L F + ++ ++V+ V+ + Sbjct: 71 YALLVLLLYFGITQYLPVLVRQIVKMVNSVLKFYSTNDATA-----------FYHYVNHY 119 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S + L +G+ + G++ + LS+I FF+ + + Sbjct: 120 ISTGTIMTQLR------HGLTIAVSTITSVGVVAFTFLLSLILS----FFYTLELPQMES 169 Query: 187 QLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + F +++ I+ + IAI ++ + +P A Sbjct: 170 FSRLFLDSKFDWFFQDIAYFGKKFTNTFGVVLEAQFFIAICNTVITTICLFFMKMPQIFA 229 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ + +++P G IS +SI G I + + + + L P + Sbjct: 230 LALVVFVFSLVPVAGVIISTIPLSIVAYSVGGIRDVIYIIIMIIVIHAFEAYVLNPKFMS 289 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G GL +G + + I Sbjct: 290 SQTDLPIFYTFIVLLIGEHFWGTWGLIVGVPIFTFLLDIL 329 >gi|251780428|ref|ZP_04823348.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084743|gb|EES50633.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 370 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 106/333 (31%), Gaps = 8/333 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P + ALI + PI F + + S + + + I+ F + + Sbjct: 43 MSPFIYALIFAYILNPIMMIFEKRFKFSRGKSILATYAIITGIIIMFFFFTIPSLVDSIA 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTNGIDFI 149 ++ +V + + W++ SEL L L + + + Sbjct: 103 SIIKEVPNYMET---IQEWINTAIKNPKLSELIVDAGLVDKIELLSIKMGNFTITILQGM 159 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDG--FSISQQLDSLGEHLFPAYWKKISRIV 207 + + + + L +DG S+ + + + K Sbjct: 160 LGYLLSLTGNLVKIVFGFLIAVYVLSD--KDGLLHSLKTITYIILKEKKASELIKACNTY 217 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 K+I I + GL+ + P + L +I AI MIP P V Sbjct: 218 NKMIGVYIGTKAIDSAIIGLIALIGLIIVKAPYALLLSIIVAITNMIPYFGPFIGEIVGA 277 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I + A +F+ + L P L+G + + G++ G G +G Sbjct: 278 GVCIFVSPMKALVVFILLLLIQQFDAWYLDPKLIGAKVGVKPFWIIMGVIIGGAFWGPIG 337 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + + +A I + + + K + + Sbjct: 338 MLLASPTLATINIYYIRLVKFYKSKNPSLFKDL 370 >gi|311071117|ref|YP_003976040.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] gi|310871634|gb|ADP35109.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] Length = 341 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 112/340 (32%), Gaps = 25/340 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIAT 67 G+ R+++ ++ LY K +L I F + + + +I Sbjct: 12 GVRRFLVFVVLAGVLYLFKSMINLILLTFIFTFLMNRLENVVRHFLNRFFRVSQRGIITL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + +Y + V + I ++++ P + + + Sbjct: 72 LYIALAVGLTVGGFVFYPV---------VAAQIEQLIKQIKYIAYHPNSIPFFDEVSNVF 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + E F + + + + + L I+ +I FF + +S+ Sbjct: 123 GDINISSYVKEAF------NVLYTYLADIST----FGLQIVMALILSMFFLFEKKRLSEF 172 Query: 188 LDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ ++ + + + IIA+ ++ A W+ P L Sbjct: 173 MEKFKTSKLAVFYNEFAFFGGKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGL 232 Query: 245 GVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ + +IP G IS +SI G + L I L P L+ Sbjct: 233 SIMVFFLGLIPVAGVVISLVPLSIIAYSTGGGMYVLYIVLVIMAIHAIETYFLNPKLMSA 292 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ +G+ GL IG + + I Sbjct: 293 KTELPIFFTFTVLIFSEHFLGIWGLIIGIPIFVFLLDILD 332 >gi|239636474|ref|ZP_04677476.1| putative membrane protein [Staphylococcus warneri L37603] gi|239597829|gb|EEQ80324.1| putative membrane protein [Staphylococcus warneri L37603] Length = 361 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 114/330 (34%), Gaps = 13/330 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P L + + + P + + + K + V ++ + + + F+ + + Sbjct: 41 FLPFLISGFLFYICLP-FQTLLEKWGFPRWASILTIFVVLIAIIAIVVAFIAPIIISNIN 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + + + + + T +++ T + +N I +I Sbjct: 100 NLIKQTPALQKETERLINF--SLTQIDKLPSDVTHRINNMVKSMGDGVTDVLSNSISYIT 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S +I + L + +D + + + + + + Sbjct: 158 SLISTI--------FLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFVVDLLKDLNYT 209 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 ++S G +++ G++L Y + G+P L + + +IP G +SFT +I Sbjct: 210 LKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFTPAAILG 269 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +I G + + I + + P ++G + + L ++ G + Sbjct: 270 IIDG-PSTFIWVCVITLIAQQLEGNVITPNVMGKSLSMHPLTIIVVILAAGDLGGFTLIL 328 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A++ + + +K +SN Sbjct: 329 IAVPLYAVLKTVISNIFKYRQRIIDKANSN 358 >gi|255517443|ref|ZP_05385119.1| hypothetical protein CdifQCD-_10076 [Clostridium difficile QCD-97b34] Length = 301 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 32/297 (10%), Positives = 97/297 (32%), Gaps = 4/297 (1%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F K + ++ + + + + L + L++++ + + Sbjct: 3 FEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTLNRLINEMPMYTDYIDSFIE-- 60 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 ++ + L +L + F+ +F+ + + + + I Sbjct: 61 KNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFLI-YTLSISSMLFNMTMGFILS 119 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I ++ + + L S + R + LG + ++ G++ Sbjct: 120 IYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHDIFYDYLLGRILDSLIIGIIAF 179 Query: 231 SAY-WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + ++ + + + L I + +IP P I + I + + + I Sbjct: 180 LGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIAMTILYSPQKTIWVIAFLFILQ 239 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + P ++G + + + ++ G G +G+F+ + A++ + I Sbjct: 240 QLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGVFLSVPIAAVVKTYVDKYI 296 >gi|119509999|ref|ZP_01629140.1| hypothetical protein N9414_20165 [Nodularia spumigena CCY9414] gi|119465323|gb|EAW46219.1| hypothetical protein N9414_20165 [Nodularia spumigena CCY9414] Length = 383 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 132/349 (37%), Gaps = 9/349 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +F +V L+ L+ ++ A++I P+ ++ K ++ +S+ Sbjct: 14 LLLIVAVFFFVVLLWQLRSLILTLMIAVVIAAAIAPLVNA-AEKLHLPRWLGVIVVYLSL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I L + +++ L SK+ + + + + G + Sbjct: 73 IFGLIGAGLIIGPSVSEQIQRLASKLPIYLDNLLIAAENFAFRLGITQIESVEEFFDIQS 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + F F+ +++I ++ + ++ + L S Sbjct: 133 LTNWLFRS-------SQQLVVRSFGFTRGFIGGVVNLILALVMSGYMVAGSKNLIKGLVS 185 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITA 249 L + + + + G +++ G+V+ + G+ +ALGVI Sbjct: 186 LFPQPWDERLADQVIPISRRMGGYIQGRVLVSAILGVVITLGLRILGLSEFALALGVIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP P+ ++ + I + + L + + L P LVG +++ Sbjct: 246 FTNLIPFVGPVLGAVPALIVAIPQSGLTFLWVLLLFVLIQNLETYVLDPLLVGSSVRVRP 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L ++GG + +G++G I P +A + V+ + + K E+ S+ Sbjct: 306 LYQLLAVLGGTQVLGIIGAVIVPPWVAGVGVLVENLYLQPKLLNEEKSA 354 >gi|88856087|ref|ZP_01130748.1| integral membrane protein [marine actinobacterium PHSC20C1] gi|88814655|gb|EAR24516.1| integral membrane protein [marine actinobacterium PHSC20C1] Length = 388 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 107/334 (32%), Gaps = 19/334 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ +++ + LK P L A++IG P+ + +LAV AT+ I Sbjct: 45 LIAVLIYLIITLKYIVIPFLVAVLIGALLVPLVQFLERHRW--PKWLAVTATL------I 96 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + ++ + Q I S + Sbjct: 97 GFFAVVSGLVVVVVSQVRLGLPSLQQQSIAAFETFRTFLSDSPLQVTDEDIDSLLAQITG 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + G + + A F DG I L Sbjct: 157 VIQR-----DSQALVSGVLSVGSTAGHVLAGTLLTLFATIFVLIDGKRIWAWTVRLFPRR 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-----PSHVALGVITAI 250 + + + + +A + + +G W+ G+ P + + V + Sbjct: 212 ARSAVDGSGQAGWITLTTFVKVQIFVAAVDAVGIGLGAWILGLFYGGFPLVIPIAVAVFL 271 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP + ++I++ L+ A + + + L+P ++G +K+ Sbjct: 272 GSFIPVVGALITGVLAIFIALVFLGPIPAVIMLGIVLLVQQLEGHILQPLIMGTAVKVHP 331 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F + G G+ G L+A++ V+ + Sbjct: 332 LAVVFAVAAGSFIAGIAGALFAVPLVAVVNVMTR 365 >gi|91975850|ref|YP_568509.1| hypothetical protein RPD_1370 [Rhodopseudomonas palustris BisB5] gi|91682306|gb|ABE38608.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 367 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 115/330 (34%), Gaps = 17/330 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ +++ LY K FF P+++A ++G P + + + VS + + Sbjct: 36 ALLIVVVIGLLYVAKPFFLPIVTAFVVGTMLSPAATYMERGRIPRA--------VSAVLI 87 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + L L+ + G + L+ W + S Sbjct: 88 VGLALAGVGFMVALISVPLIDWTSRLPELGAILRDKLN---FFERPMAFWRQLQSAMGGS 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ S P F L L + ++ ++D + + G Sbjct: 145 ELPSTPIQMPQIEWMQPTV--EFLSPTLTEFLLFLVTLVLFIATWKDLRR--ALVMNFGG 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + + + L +T+I + G G LAG+P+ LG + A + Sbjct: 201 RDARLRMLRILNEIEQSLGGYLLTVTVINLCYGAATGVICALAGMPNPAGLGALAATLNF 260 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P+ + + I L + + F+ + P ++G ++L L Sbjct: 261 IPVIGPVVMFVILTLVGIISMPTMGEGLLAPIGFVLLTFVEGHFITPTIIGRRLELNALA 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F L G +G F+ L+ + V+ Sbjct: 321 VFIALAFWTWLWGPMGGFLASPLLIVGLVL 350 >gi|322370455|ref|ZP_08045013.1| permease [Haladaptatus paucihalophilus DX253] gi|320549872|gb|EFW91528.1| permease [Haladaptatus paucihalophilus DX253] Length = 381 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 112/342 (32%), Gaps = 33/342 (9%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +ILV + L + ++ + + + + PI + A + + + Sbjct: 18 LFAAALILVLVTSLGSYLGWLVFGVFLYYVARPIARRLVG-FGLPPGIAASVT----LAV 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P + L + +S V +A+ + + ++ + + P+ L Sbjct: 73 IVLPFIALLGTVAVIAFGQLSTVRVAD---------VERLVRVLFPGFDFRAIPTTPERL 123 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L+ I F ++ +I +FF RD I+ Sbjct: 124 YDSVTRLLRNPSIRSFLFQFRGLIGAFATQSYNLFLTLIFVFFLVRDEGKIAGWFRRTVA 183 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------VPSHVALG 245 + V + + S F G T+ ++ Y L +P + + Sbjct: 184 D-EETRTGEYLHAVDRGLNSVFFGYTLTIFVIIVLSAVIYTLLNLVAPPGMAIPQTMLVA 242 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCL---FLWGAIELFIVDK----TLR 297 + T + ++P G I + V YL I + L L+ AI D +R Sbjct: 243 IATGLATIVPLVGRSIVYFVVVFYLAIVALRTDPVLLWFPVLFLAIMEIAFDNAVRTYIR 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 P L G P F + G G G+F+GP +M + Sbjct: 303 PILSGRL--FPTGLIMFAYLLGPPVFGWYGIFLGPFIMVVTV 342 >gi|229121503|ref|ZP_04250730.1| hypothetical protein bcere0016_18070 [Bacillus cereus 95/8201] gi|228661967|gb|EEL17580.1| hypothetical protein bcere0016_18070 [Bacillus cereus 95/8201] Length = 339 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 127/352 (36%), Gaps = 25/352 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP TF L+ +G+ GL IG + + + + +N++ Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDVNNEESIKNRK 339 >gi|154684950|ref|YP_001420111.1| YdbI [Bacillus amyloliquefaciens FZB42] gi|154350801|gb|ABS72880.1| YdbI [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 69/201 (34%), Gaps = 4/201 (1%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMT 219 + L ++ +I FF + +++ + ++ +++ + Sbjct: 148 FGLQVVMSLILSMFFLFEKKRLTEFMKKFQHSKLSVFYYELAYFGSKFARTFGKVLEAQF 207 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 IIA+ ++ A + P L ++ + +IP G IS +SI G Sbjct: 208 IIALVNCILTLIALAILHFPQLFGLSIMVFFLGLIPVAGVVISLIPLSIIAYTTGGAAYV 267 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L + I L P L+ +LP TF L+ G+ GL IG + + Sbjct: 268 IYIVLVIFVIHAIETYFLNPKLMSAKTELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFL 327 Query: 339 AVIWKESIMAIKENKEKISSN 359 I KE + Sbjct: 328 LDILDVVNNEEKEKNGPVPDK 348 >gi|146338157|ref|YP_001203205.1| putative permease [Bradyrhizobium sp. ORS278] gi|146190963|emb|CAL74968.1| putative permease [Bradyrhizobium sp. ORS278] Length = 372 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 118/331 (35%), Gaps = 18/331 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + LY +GFF P++ A ++G P + + + + Sbjct: 42 ILTVICVTSVLYVARGFFLPIVMAFVVGTMLSPAANLLERYRVPRGIGA--------VLI 93 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I L + L ++ + + + + LW + + Sbjct: 94 VIAVAAGLAFIIGLISAPVLDWTNRLPELAAQLK---AKLHVFDKPLALWHEMQTAIGGG 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF-YRDGFSISQQLDSLG 192 + L+ +D++ F ++ + F + LF +RD + + G Sbjct: 151 SAQASNTLELPKLDWVQPTIEFLTPTFTEF--MLFFATLVLFIASWRDLRR--TLIMTFG 206 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +H +I + + + + +T+I G G+ G A + G+P+ LG + A + Sbjct: 207 DHEARLRTLRILNELELHLGNYLMTVTLINTGVGVATGLACAVTGMPNPAGLGALAATLN 266 Query: 253 MIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P PI+ V + L+ + L A+ F+ + P ++G + L L Sbjct: 267 FVPIIGPIAMFMVLVLVGLIAFPTLSGGMAAPLIFAVITFMEGHFVTPTIIGRRLALNAL 326 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F L G +G F+ L+ + ++ Sbjct: 327 AVFIALAFWTWLWGPMGAFLASPLLIVGLIV 357 >gi|332175898|gb|AEE25152.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 373 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 19/312 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W++ +L +LYF + PV+ +I P+ + ++ ++ Sbjct: 18 WLLFLGVLYTLYFTQSLLMPVVVTSLIALLLSPLVAGLQRLHIPR-----TVSAFLLVAT 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I P FL ++ V QH +SD G + Sbjct: 73 LIAPFTFLGAELAEPAQKWAKLVPELTQHITEQLDSISDAMDGKENAPAQNDDDDGFSFF 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM-----------IIALFFFYRDGF 182 I SE + + R L+ LS++ +I F G Sbjct: 133 GIFSEKAEQAPVKSDDNAMSQRLKQGGLEIMLSVLSSTPLILAQLMTGVILTLFLLIFGP 192 Query: 183 SISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + + + K + + ++II G GL + G+ Sbjct: 193 KLFEAFIRYFPKITDKDQARCLVATIQKELSRYIVTVSIINAGLGLSTALVLYFIGIEDA 252 Query: 242 VALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ ++ IP + L+ G A + I + + P Sbjct: 253 LLWGVLAGLLNFIPYVGSLIGATILTLAGLVQFGMQVTALIPPGVYFVLNLIESQFITPT 312 Query: 300 LVGGPIKLPFLP 311 ++G ++L L Sbjct: 313 VLGRNMQLNPLI 324 >gi|308172315|ref|YP_003919020.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|307605179|emb|CBI41550.1| putative integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] Length = 349 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 4/197 (2%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMT 219 + L ++ +I FF + +++ + ++ +++ + Sbjct: 148 FGLQVVMSLILSMFFLFEKKRLTEFMKKFQHSKLSVFYYELAYFGSKFARTFGKVLEAQF 207 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 IIA+ ++ A + P L ++ + +IP G IS +SI G Sbjct: 208 IIALVNCILTLIALAILHFPQLFGLSIMVFFLGLIPVAGVVISLIPLSIIAYTTGGAAYV 267 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L + I L P L+ +LP TF L+ G+ GL IG + + Sbjct: 268 IYIVLVIFVIHAIETYFLNPKLMSAKTELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFL 327 Query: 339 AVIWKESIMAIKENKEK 355 I E E Sbjct: 328 LDILDVVNNEEMEKSEP 344 >gi|303247512|ref|ZP_07333784.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491208|gb|EFL51100.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 373 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 106/335 (31%), Gaps = 17/335 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + W F LV L G F V I+ F + K + T Sbjct: 7 QFLRTNKTLAIWA-AFFGLVWLANFYGLFGLVFITYILCFLFNGPIHALAVKTKLPRTLW 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + + + + + + + E + K+ P L + G + Sbjct: 66 ATLVYIVFVSVALTLVSSVLPKLGSESTSFLKKL----------PDTLETLRGHLDNWAW 115 Query: 123 WTKHLSHPQSLKIL--SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ P + S L + A Y + + + F D Sbjct: 116 LAPDMAAPIAKIKDYLSIEALVGVKAQTLFTIAVNSFNQISTYVSTFLLGTLFSFLIMLD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ + SL E + +R V + V+ F +IA ++ + G Sbjct: 176 FPNLRAKTISLRESRLRDIYDVTARSVVRFAVVVGMGFRAQMLIAAVNTILTAIGMHILG 235 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + + L + +IP G IS + + + +A + I I L Sbjct: 236 IEPVMLLSTVVFFCGLIPVLGTFISSAPIVLVAVNTTGPHHALWAIVMIIIVHTIETYIL 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 P +V K+ L T L G + GL G+ +G Sbjct: 296 NPRIVAAMFKISPLVTLMILYVGHKLFGLWGMVLG 330 >gi|330879900|gb|EGH14049.1| membrane protein, PerM family [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964846|gb|EGH65106.1| membrane protein, PerM family [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017405|gb|EGH97461.1| membrane protein, PerM family [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 356 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 108/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APVL+ L++ F + + Sbjct: 15 DEEAVVLAVLLFVAFTLVLTLGGMLAPVLAGLVLAFLMHGLVGLLERLR----------- 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + +V LF+ + + + P L+ + H Sbjct: 64 MPEVAAVGVVFTLFIGALLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHLI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + + + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWSDQFIYLMIAHGVIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|328552126|gb|AEB22618.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208] gi|328910399|gb|AEB61995.1| putative integral inner membrane protein [Bacillus amyloliquefaciens LL3] Length = 349 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 4/197 (2%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMT 219 + L ++ +I FF + +++ + ++ +++ + Sbjct: 148 FGLQVVMSLILSMFFLFEKKRLTEFMKKFQHSKLSVFYYELAYFGSKFARTFGKVLEAQF 207 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNA 278 IIA+ ++ A + P L ++ + +IP G IS +SI G Sbjct: 208 IIALVNCILTLIALAILHFPQLFGLSIMVFFLGLIPVAGVVISLIPLSIIAYTTGGAAYV 267 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L + I L P L+ +LP TF L+ G+ GL IG + + Sbjct: 268 IYIVLVIFVIHAIETYFLNPKLMSAKTELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFL 327 Query: 339 AVIWKESIMAIKENKEK 355 I E E Sbjct: 328 LDILDVVNNEEVEKSEP 344 >gi|283853406|ref|ZP_06370652.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283571219|gb|EFC19233.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 370 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 12/339 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L + F LV L G F V I+ F ++ + T AV Sbjct: 8 ILRTNKTLAIWAAFFGLVWLASYYGLFGLVFITYILCFLFNGPIERLAARTKLPRTLWAV 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + + + E + K+ + + + M A Sbjct: 68 VVYLIFVAMVLTIASSVLPKLGSESTAFLKKLPDTLETLRQRLDAWAWLAPDMAAPISKI 127 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K ++L + L ++ + + L S + M+ D ++ Sbjct: 128 KDYLALEALVGVKAETLFVIAVNSFNQITTYISTFLLGTLFSFLIML--------DFPNL 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +L + + +R V + V+ F +IA ++ + G+ Sbjct: 180 RARTIALRDSRLRDIYDVTARSVIRFAVVVGMGFRAQMMIAALNTILTAIGLVILGIQPV 239 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L + +IP G IS + + + + +A + + I L P + Sbjct: 240 MLLSTVVFFCGLIPVLGTFISSAPIVLVAVNTVSPGHAVWAIVMIILVHTIETYVLNPRI 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 V K+ L T L G + GL G+ +G + + Sbjct: 300 VAAMFKISPLLTLVILYVGHKLFGLWGMVLGVPVSVFLL 338 >gi|312128438|ref|YP_003993312.1| sporulation integral membrane protein ytvi [Caldicellulosiruptor hydrothermalis 108] gi|311778457|gb|ADQ07943.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor hydrothermalis 108] Length = 373 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 117/360 (32%), Gaps = 24/360 (6%) Query: 1 MRETMLNPQGIMRWMIMFI---ILVSLYFLKGF----------FAPVLSALIIGFTSWPI 47 MRE N + ++ I I Y +K F F PV+ L I S P+ Sbjct: 1 MREFTKNRFVVAMIYVILISAFIFSCAYLIKTFDLFVRFVIKAFIPVIIGLFIAEVSEPL 60 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 +K S T A++ + + + L Y + E LV+ + + I Sbjct: 61 LKYLEKRKV-SRTISAILILIVLNIILGFMLAEGIYILVNECMSLVTSLQNIDYDKIY-- 117 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI---FLDYC 164 + + + L P I S TN ++ I + + + L Sbjct: 118 ---QALDKLFASVKNIYSGLPGPIVNFIQSGVDELTNVLNQIATMSLKVIKVIPATLKGI 174 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 F +++ FFF RD + L + V + I+AI Sbjct: 175 TVWFFSVLSAFFFMRDRHKMRAWLIQNFSVQLYRELSSVIFKVIDSVVDYAKSQIILAIL 234 Query: 225 EGLVLGSAYWLAGVPS-HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 L + P V ++ + + G+ I + I G+ L + Sbjct: 235 MFLTGIIGLSIIKAPYFLVISLLLGLLSIIPIVGSGIILLPWIVGSFIAGDTKFGIKLLI 294 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I L I + +V + + T + GV G G IGP+L+ + +++ Sbjct: 295 VYLIILGIRE-FASIKIVASQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 353 >gi|223936540|ref|ZP_03628451.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223894704|gb|EEF61154.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 632 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 4/184 (2%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + L ++ ++ + F + + +L + ++ + Sbjct: 146 VEVIQKIMGSLLGIAINAFVVVFFVIFMLMEREDMRDRLIRMIGTGKLNTTTQLLDDAGQ 205 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSI 267 + ++ G++ G + G+P+ + G++ I IP G ++ Sbjct: 206 RVSRYLRVQLMVNATYGILAGIGLYFIGIPNALLWGLLAGIFRYIPYAGIWVAVTMPFAL 265 Query: 268 YLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L + + L+GA+EL + L P+L G + L F V G + Sbjct: 266 GLAVDPGWTKPLLTIGLFGALELTVA-NLLEPWLYGTSTGITPLAVLFAAVFWTWLWGPV 324 Query: 327 GLFI 330 GL + Sbjct: 325 GLLL 328 >gi|183232629|ref|XP_653434.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|169801952|gb|EAL48046.2| hypothetical protein EHI_006110 [Entamoeba histolytica HM-1:IMSS] Length = 361 Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 107/324 (33%), Gaps = 15/324 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-------- 97 P+ I T + + ++ L + + ++E +L++ + Sbjct: 43 PLLVITIFLFVNRRTLASFMIITILLSLVSLLSTVVIKQSIIEFHQLINTITKLVTNLSE 102 Query: 98 -LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 N V S + +L + +++K LK P F Sbjct: 103 DSVNLLISRVEESYSGQIILEYMDKLGLMNYLSLKTIKPAVLQGLKLLSSQVQPYFLINL 162 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 D + I +L +F +I + L + + +R + Sbjct: 163 ASSVTDNIFAFFIFIYSLLYFLIYQNTILNGISQLIPFDVEVVQIIRNGVASTSLRLILM 222 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNI 275 + I + + + LA +P + +I A++A++P + I + + L +GN Sbjct: 223 NSLLF-IFKFTLTFVTFSLAHLPYKMVCSIICALLAILPAFSNMIVWLPAGLVLFFQGNT 281 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A+ FI+D + + +V GV G+ G +GP++ Sbjct: 282 TGMIWFISVHAVTYFIIDG----WFYSFIPDIIPYFVGLSVVFGVYVFGITGCILGPLVF 337 Query: 336 ALIAVIWKESIMAIKENKEKISSN 359 + + I+ + K+KI + Sbjct: 338 VMTMTLKDIFILQNQRLKQKIKQD 361 >gi|326571447|gb|EGE21462.1| hypothetical protein E9S_02469 [Moraxella catarrhalis BC7] Length = 369 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTDSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYA 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|165920273|ref|ZP_02219545.1| putative membrane protein [Coxiella burnetii RSA 334] gi|165916829|gb|EDR35433.1| putative membrane protein [Coxiella burnetii RSA 334] Length = 363 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 121/342 (35%), Gaps = 34/342 (9%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + PV+ ++++ + + + AV +++LF+ G Sbjct: 41 FFGKYLLPVVISVVLAYLFASPVRWLERWRFPH--WAAVT------------IVYLFFLG 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++ Q + + + P + + W H ++ N Sbjct: 87 IFLLALFGLLPLMWKQ----LASMVHEFPKAITKGQEWMTEYMHRYPKLFPTDPI--ANL 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMII-----------ALFFFYRDGFSISQQLDSLGEH 194 ++ + ++R G L + L+ I II +FFF +DG SIS L Sbjct: 141 AGYLHQQSARIGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGGSISNWLSRFLPE 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + I + G I I +V A+ L G+ LGV+ + ++ Sbjct: 201 RQGL-IRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFALLGLQYAFLLGVLLGLSVIV 259 Query: 255 P-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P GA + ++I L++ G + L + AI + + L P L + L + Sbjct: 260 PYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLLFSEAMDLHPIVI 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+F L L+ + A E Sbjct: 320 ILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNE 361 >gi|319652964|ref|ZP_08007069.1| membrane protein [Bacillus sp. 2_A_57_CT2] gi|317395313|gb|EFV76046.1| membrane protein [Bacillus sp. 2_A_57_CT2] Length = 337 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 115/342 (33%), Gaps = 25/342 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 LN I R++I II+++LY L+ +L I F + +S+ + + + Sbjct: 8 LNNNSIKRFIIFGIIVLALYLLRSMINLILITFIFSFLMDRLVKLVLSRFKLNRKLTVIT 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWASELW 123 + ++ L + ++ + E+ +L +V +H V ++ + ++ Sbjct: 68 LYMGIIGLLSIGIIKYLPLIVSEISQLFKQVESFYTQKHDNIVITYIVQMLETNEITKYL 127 Query: 124 TKHLSHP-QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + Q +S ++ + F +++ L IA F+ Sbjct: 128 EQGFAFLLQYFSDISHIAVQVLLSLILSLFFLLEKPKLIEFTLKFKHSKIADFY------ 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + +IA ++ A W+ P + Sbjct: 182 ---------------NEIEYFGSKFVQTFGKVIEAQFVIATVNCILTTLALWIMDFPQLM 226 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP G IS + G + L + I L P L+ Sbjct: 227 GLSILIFLLGLIPVAGVIISLVPLCTIAYSLGGFIQVFYIVLVIMVIHAIEAYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + + + Sbjct: 287 SSKTDLPVFYTFIVLIFSEHFFGVWGLIVGIPVFVFMLDVLE 328 >gi|76802921|ref|YP_331016.1| permease [Natronomonas pharaonis DSM 2160] gi|76558786|emb|CAI50379.1| predicted transporter (predicted permease) [Natronomonas pharaonis DSM 2160] Length = 369 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 102/327 (31%), Gaps = 29/327 (8%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F A + A+ + +++ Y+ + V + + VPL+ L Y ++ + Sbjct: 26 FIAALTVAVFLYYSTRRFYALLGRLRLPKRIRA-----VLALSVLGVPLMLLISYTVILL 80 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + V P ++ W L + + IDF Sbjct: 81 AVEARQFVEEYPVFESAPDDVA------WFEGLEDLPEPTINGIIQAYQAGDLDIFIDFA 134 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH-LFPAYWKKISRIVP 208 A+ + L+++ +++ ++ DG L E + Y + + + Sbjct: 135 VEHAAFLSSLITGLLLNLLIVVVVTYYLLIDGTKARDWLLRFDEDAIVREYLEAVDDELE 194 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLA-----GVPSHVALGVITAIMAMIPGGAPISFT 263 V+ L + +I++ + + Y A VP G +T + ++IP Sbjct: 195 AVLFGNLLNVIVISLI-AVAVFMGYNAAVPAPVEVPYPALAGALTGVASLIPVVGMKIVY 253 Query: 264 AVSIYLLIKGNIFNA---------TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + + L L + I D LRP+ + Sbjct: 254 LPLAVAAAVPVVLDGPTELLVYIVGFLALAVIVVDTIPDLVLRPYF--SGNRTHVGLLML 311 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G G GLF P+L+ L Sbjct: 312 AYIFGPVVFGFYGLFFAPILLVLGLTF 338 >gi|156936358|ref|YP_001440274.1| hypothetical protein ESA_04258 [Cronobacter sakazakii ATCC BAA-894] gi|156534612|gb|ABU79438.1| hypothetical protein ESA_04258 [Cronobacter sakazakii ATCC BAA-894] Length = 337 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 117/321 (36%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + IIL ++ P+L AL + P+ + F+ + +A V Sbjct: 2 LQKLAALVIILAGIHAAADMIVPLLLALFLAIVLNPLVTWFMRRGFRRP-----VAITIV 56 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E V+ + N+ + L + + Sbjct: 57 VFVMLIGLTLLLGVLAASFNEFVALMPKYNKE--------------LTRKLLHLQEMVPF 102 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + E L+ D + FA+ S++ +++ + F + + +L Sbjct: 103 MHLHLSPERMLQRMDSDKMMTFATTLMTQLSGAMASVVLLVMTVVFMLFEVRHVPYKL-R 161 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + R + V L +I++ G+++ L + + GV+ + Sbjct: 162 FALSNPQLHIAGLHRALKGVSHYLALKT-LISLWTGVIIWLGLTLLDIQFALMWGVLGFL 220 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP GA +S I L+ ++ + + ++ I+ + P ++G + + Sbjct: 221 LNYIPNIGAVLSAIPPMIQALLFNGVYEVVMVGVLFSLVHMILGNIVEPRMMGHRLGMST 280 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 281 MVVFLSLLFWGWLLGPVGMLL 301 >gi|307297810|ref|ZP_07577616.1| protein of unknown function UPF0118 [Thermotogales bacterium mesG1.Ag.4.2] gi|306917070|gb|EFN47452.1| protein of unknown function UPF0118 [Thermotogales bacterium mesG1.Ag.4.2] Length = 363 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 79/242 (32%), Gaps = 1/242 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + G + K + D + ++ Sbjct: 89 LDSLFNGGTFDKWLEKLPPFISEAIVDIVESASQWLSDAAIMIGQYVASNITSWITGVVL 148 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 +IIA F R I + + L + K ++ G IIA+ G ++ Sbjct: 149 LIIAGFVVARKTNMIQKSVPVLFPGCDQDKVSSFFHSLYKDFQTYIGGQLIIALVVGTII 208 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIE 288 + G+P+ + LG++ I +P + + + + ++ + I Sbjct: 209 AIGSAILGIPNAIFLGLLAGITNFVPYLGVVVTSIPMIVLSFVSKGLWGVVGAIVLLVIA 268 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L P ++ +K+ + ++G +G+ G+ ++ I W + I++ Sbjct: 269 NQMEIWFLSPKILSNRVKINWFIVLVSIIGFGELLGVFGVVFAVPILIFIKRYWMDFILS 328 Query: 349 IK 350 + Sbjct: 329 ER 330 >gi|320160814|ref|YP_004174038.1| hypothetical protein ANT_14100 [Anaerolinea thermophila UNI-1] gi|319994667|dbj|BAJ63438.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1] Length = 432 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 94/270 (34%), Gaps = 10/270 (3%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPR 151 S + Q +P L+ + L + + L+++ L + Sbjct: 117 SLIRFLQQTLKDLPSLLTQWSEMPVQVGPFQFVLPNFMDVNTLTQSLLGIVQPLLSRAGL 176 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 ++ + F+++ +F + S ++ + + +K + + Sbjct: 177 LVGSIASGAFNFLGWVFFILLISYFILAESGGTSPEIIRINLPGYNEDLRKFGVYLSGIW 236 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 + G II + LV + + G+ + L ++ + IP G +++T+ + L Sbjct: 237 NAFLRGQIIIILITILVYTALLGILGLRFFIGLALLAGLARFIPYVGPAVAWTSYGLVAL 296 Query: 271 IKGN-------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +G+ + I+D + L+G +K+ + G Sbjct: 297 FQGSNYFGLPPWGYVILVVGLAWFTDVILDNLVATRLMGTALKIHPAAVMVSALIGANLF 356 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + ++A + ++ + + + + Sbjct: 357 GIIGVVLAAPVVATLKLLTSYVVYRLSDQE 386 >gi|197106958|ref|YP_002132335.1| conserved predicted permease protein [Phenylobacterium zucineum HLK1] gi|196480378|gb|ACG79906.1| conserved predicted permease protein [Phenylobacterium zucineum HLK1] Length = 360 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 89/322 (27%), Gaps = 24/322 (7%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L++L P+ A+ + + S A T + L + + Sbjct: 2 LHWLSNILTPLALAMFLAVMIDGFARVLQHRLPGVSRRAA---TPLAVVLSVAIFGGAAF 58 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + +++V + + + GM T+ L Sbjct: 59 FVADNAASFGAQLVTYTPKLNGLIARFAGM-VGMDVPPTVTELLRQLDP----------- 106 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE-HLFPAYWKK 202 R+ + D+ + F+++ L F ++ SL Sbjct: 107 ------ARYLGQIARGLQDFVSTAAFVLVYLGFILASRHGWERKTVSLFPTRDERQEAVN 160 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + T+ + + G+ + V ++ I + IP I Sbjct: 161 AFLRIRNGVEQYLWVQTVTGLMIAVASWIVMAAVGLDNAVFWAILIFIASYIPVVGGIVA 220 Query: 263 T--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 LL ++ A L V ++P + G + + + L Sbjct: 221 VAAPPIFALLQFDTLWQAIVLLAVLQGVTMFVGNVVQPRMQGRSLNMDPIVLLLALAFWT 280 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G F+ L ++ VI Sbjct: 281 VIWGLAGAFLSTPLTVMLMVIL 302 >gi|16760382|ref|NP_455999.1| transport protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764826|ref|NP_460441.1| transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141854|ref|NP_805196.1| transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167994459|ref|ZP_02575550.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229860|ref|ZP_02654918.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168241001|ref|ZP_02665933.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260355|ref|ZP_02682328.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463103|ref|ZP_02697034.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443521|ref|YP_002040728.1| putative transport protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451154|ref|YP_002045517.1| putative transport protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469032|ref|ZP_03075016.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264890|ref|ZP_03164964.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243169|ref|YP_002215658.1| putative transport protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390120|ref|ZP_03216731.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857018|ref|YP_002243669.1| transport protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213646062|ref|ZP_03376115.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238911713|ref|ZP_04655550.1| putative transport protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289809740|ref|ZP_06540369.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823744|ref|ZP_06543356.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25325145|pir||AH0682 probable membrane protein STY1587 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420000|gb|AAL20400.1| putative membrane transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502677|emb|CAD01833.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137482|gb|AAO69045.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194402184|gb|ACF62406.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409458|gb|ACF69677.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455396|gb|EDX44235.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195634503|gb|EDX52855.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243145|gb|EDY25765.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937685|gb|ACH75018.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602565|gb|EDZ01111.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205327680|gb|EDZ14444.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335409|gb|EDZ22173.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339314|gb|EDZ26078.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205351272|gb|EDZ37903.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708821|emb|CAR33149.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246682|emb|CBG24492.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993377|gb|ACY88262.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158011|emb|CBW17506.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321224097|gb|EFX49160.1| Putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616099|gb|EFY13015.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620548|gb|EFY17410.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622949|gb|EFY19791.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628744|gb|EFY25529.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631454|gb|EFY28212.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638789|gb|EFY35484.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641046|gb|EFY37690.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646589|gb|EFY43097.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649046|gb|EFY45487.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654560|gb|EFY50881.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658672|gb|EFY54930.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665195|gb|EFY61383.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667939|gb|EFY64099.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671649|gb|EFY67770.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677304|gb|EFY73368.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680032|gb|EFY76071.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685538|gb|EFY81534.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129748|gb|ADX17178.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323191877|gb|EFZ77124.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198165|gb|EFZ83274.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203333|gb|EFZ88359.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205648|gb|EFZ90611.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214085|gb|EFZ98848.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217318|gb|EGA02038.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221938|gb|EGA06330.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223609|gb|EGA07922.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232193|gb|EGA16299.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234364|gb|EGA18451.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237815|gb|EGA21874.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242621|gb|EGA26642.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249646|gb|EGA33557.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254461|gb|EGA38275.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255967|gb|EGA39707.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260993|gb|EGA44589.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266703|gb|EGA50190.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272256|gb|EGA55667.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623403|gb|EGE29748.1| putative transport protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 344 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 113/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ L ++ L +L N+ +P++ S + + E W Sbjct: 66 SLLIVIIVMLMVLLLAYLGTSL--------------NELARTLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|330686149|gb|EGG97767.1| putative membrane protein [Staphylococcus epidermidis VCU121] Length = 361 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 114/330 (34%), Gaps = 13/330 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P L + + + P + + + K + V ++ + + + F+ + + Sbjct: 41 FLPFLISGFLFYICLP-FQTLLEKWGFPRWASILTIFVVLIAIIAIVVAFIAPIIISNIN 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + + + + + T +++ T + +N I +I Sbjct: 100 NLIKQTPALQRETERLINF--SLTQIDKLPSDVTHRINNMVKSMGDGVTDVLSNSISYIT 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S +I + L + +D + + + + + + Sbjct: 158 SLISTI--------FLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFVVDLLKDLNYT 209 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 ++S G +++ G++L Y + G+P L + + +IP G +SFT +I Sbjct: 210 LKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFTPAAILG 269 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +I G + + I + + P ++G + + L ++ G + Sbjct: 270 IIDG-PSTFIWVCVITLIAQQLEGNVITPNVMGKSLSMHPLTIIVVILAAGDLGGFTLIL 328 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A++ + + +K +SN Sbjct: 329 IAVPLYAVLKTVISNIFKYRQRIIDKANSN 358 >gi|223986201|ref|ZP_03636220.1| hypothetical protein HOLDEFILI_03530 [Holdemania filiformis DSM 12042] gi|223961838|gb|EEF66331.1| hypothetical protein HOLDEFILI_03530 [Holdemania filiformis DSM 12042] Length = 355 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 100/320 (31%), Gaps = 35/320 (10%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +P+L + +I F P F+ K + + L ++ + + M + Sbjct: 43 LSPLLFSCLIVFLFEP----FVEKLPFPRGISCSLVYFGFLGLLVLGIGMMVPLVMEQGS 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L+ + G +L H F Sbjct: 99 QLLGEA-------------------GRLREQLAATEFFHWAGQLDWHGVFTAG------Y 133 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A +D + +F D + + L +W + +V Sbjct: 134 EAAMSATRSAVDRLSFFGVSFLGAYFIALDMEAFGRILKKRLPSY--QHWLLFYKTSSRV 191 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIY 268 + G+ + + + + + VP+ V ++ A+ +IP + Sbjct: 192 VYHYLRGLALDLLFLMITVSVLLLIFSVPNAVFYAIMLALFNLIPYLGATVGQIVILLAQ 251 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G I + LW + I ++P + + L + T L+ G G++G+ Sbjct: 252 YFATGQIPWLLGVLLW--LIQQIEANWVQPLIFKKVMNLRPVYTLIALLAGGCFFGMIGI 309 Query: 329 FIGPVLMALIAVIWKESIMA 348 + P+L A++ + ++ + A Sbjct: 310 ILAPILAAIVQLAYRSYLFA 329 >gi|27380070|ref|NP_771599.1| hypothetical protein blr4959 [Bradyrhizobium japonicum USDA 110] gi|27353224|dbj|BAC50224.1| blr4959 [Bradyrhizobium japonicum USDA 110] Length = 388 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 106/343 (30%), Gaps = 10/343 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ +L ++ + + +++G + ++ + T I +++ Sbjct: 35 ISVVLVTALLAFTWYFAATLLLIFTGMLLGVGLNALTNALGRRVHLPHTMRLAIVCIALA 94 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLAN---------QHGIPVPRWLSDIPGGMWASEL 122 + + +L + E L+SK + + HGI + +++ Sbjct: 95 LMLAG-VAYLGGATIAEQASLLSKTIRSQITNVKSFLDTHGIDTSFFDFGNAAPAASTDA 153 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + I + + + +I ++ F Sbjct: 154 GSTPTPNTAPRGNLPGAGALASSGGAIVSQTFKLLLGTISAVGNIFIVLFLGLAFAAQPS 213 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L L I + + + + I+ + G+V + G+P Sbjct: 214 VYHDGLLFLVPARHRTRATLIVDRISETLERWLIAQIIVMLAVGVVTWIGLAIIGIPGSF 273 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG+ ++A IP I V + + A + + L P L Sbjct: 274 ILGIQAGLLAFIPTVGAIIAGVVVVLASLASGWIPALSALILFLGVHAMESYVLTPLLQR 333 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + +P F + G+ GL + L+A+ V+ Sbjct: 334 QALDIPPATLFAFQILLGVVFGIWGLALALPLVAIAKVMIDHF 376 >gi|150019553|ref|YP_001311807.1| hypothetical protein Cbei_4743 [Clostridium beijerinckii NCIMB 8052] gi|149906018|gb|ABR36851.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 363 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 120/343 (34%), Gaps = 16/343 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + R ++ II+ +Y L+ L + ++ + + ++ + Sbjct: 7 LFKKDIVRRICVLLIIVFFMYILRSMLNLFLLTFFFTYIAYSLQVGITKRLDKFIKVKPI 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I T+ + ++F Y + + + + G+ + R+ GG S Sbjct: 67 IVTLFLYIFMTSIIIFASYRYIPII------IRQLTEIGMKISRFDFRDIGGEVLSTYIV 120 Query: 125 KHLSHPQSLKILSETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + D R+AS G + +S+I + FF + Sbjct: 121 PYFGKFDFMSFFRNSEINELLNFDQFLRYASNIGTWSFNIFVSLILSL----FFMVEREK 176 Query: 184 ISQQLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + Y K IIA ++ + + G P Sbjct: 177 IKEFFSEFQDSKIAILYRYTKDFGINFLNSFGKVIQAQIIIAFVNSILSVISLFALGFPQ 236 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LGV+ + +++P I+ +SI G + + A+ + L P Sbjct: 237 VLGLGVMIFLFSLVPVAGTIASLIPLSIIAYTVGGFKMILYILIIIAVLHALESYVLNPR 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + +LP F L+ MG+ GL +G P+LM ++ ++ Sbjct: 297 FMADKTELPVFVVFITLLVSEHFMGVWGLLLGVPLLMFVLDLL 339 >gi|221639768|ref|YP_002526030.1| hypothetical protein RSKD131_1669 [Rhodobacter sphaeroides KD131] gi|221160549|gb|ACM01529.1| Hypothetical Protein RSKD131_1669 [Rhodobacter sphaeroides KD131] Length = 331 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 56/178 (31%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 FAS +++ ++ + D + L +L ++ I Sbjct: 116 GGFASTAVSATFGALGNVVIILFIGLYTAVDPGLYRRGLRALLAPPLRPRGDEVLAIADG 175 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +R G I G++ WL G+P LG+I A++ IP P+ ++ L Sbjct: 176 TLRGWLGGQIISMTVVGVLTWLGLWLIGIPLAFILGLIAALLTFIPNIGPVLSAVPALLL 235 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + P + + LP + GL+G Sbjct: 236 ALPEGAEQVGLVLAVFLTVQTFESYLVTPLIQKERVALPPALIISAQLLMGVLFGLMG 293 >gi|148543369|ref|YP_001270739.1| hypothetical protein Lreu_0130 [Lactobacillus reuteri DSM 20016] gi|184152779|ref|YP_001841120.1| hypothetical protein LAR_0124 [Lactobacillus reuteri JCM 1112] gi|227364443|ref|ZP_03848533.1| membrane protein [Lactobacillus reuteri MM2-3] gi|325683642|ref|ZP_08163158.1| permease [Lactobacillus reuteri MM4-1A] gi|148530403|gb|ABQ82402.1| protein of unknown function UPF0118 [Lactobacillus reuteri DSM 20016] gi|183224123|dbj|BAG24640.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227070536|gb|EEI08869.1| membrane protein [Lactobacillus reuteri MM2-3] gi|324977992|gb|EGC14943.1| permease [Lactobacillus reuteri MM4-1A] Length = 341 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 9/215 (4%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +GI + G I + + +S+I FF+ + +++ S + F +++ I Sbjct: 131 HGITIAVSTLTSIGAITVSFVMSLILS----FFYTLELKQMNEFSHSFLDSDFGWFFQDI 186 Query: 204 S---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + IAI ++ +P AL +I I +++P G Sbjct: 187 DYFGKKFVNTFGVVLEAQFFIAICNTVITTIGLLFMRMPQIFALSLIVFIFSLVPVAGVI 246 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS +++ G I + + + I + L P + LP TF L+ G Sbjct: 247 ISTIPLAMVGYSVGGIRDVVYIIIMIIIIHTLEAYVLNPKFMSSRTDLPIFYTFIVLLIG 306 Query: 320 VRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENK 353 G GL +G P+ L+ V+ +SI K++K Sbjct: 307 EHLFGTWGLIVGVPIFTFLLDVLGVKSIRGAKKSK 341 >gi|331698035|ref|YP_004334274.1| hypothetical protein Psed_4259 [Pseudonocardia dioxanivorans CB1190] gi|326952724|gb|AEA26421.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans CB1190] Length = 405 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 104/313 (33%), Gaps = 21/313 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV AL++ P++ ++ + A + + +V + + ++ Sbjct: 56 IGPVFLALVLVIALAPVHGRLRNRGW--PGWAATLVLALSVYAVVVSIALGIIVSIGQLA 113 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + ++ + AS T+ P+ L+ + ++ + + Sbjct: 114 TTLPQYAAQSRDLV------------SSASSTLTRFGVSPEELRKVVDSLDLGKLVQVVG 161 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + + ++ + ++ +++ + + R Sbjct: 162 SVLADVAGLASNLIFLLTLLLFLT----IENVTVPKRVGRIA--VDRPLVAGALRSFAHN 215 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 R L T+ + + A ++ G+P V GV+ + IP G I ++ Sbjct: 216 TRQYLLVSTVFGLIVAALDTIALFVMGIPLAVTWGVLAFVTNYIPNVGFIIGLVPPALLA 275 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ G + + F++ L+P VG + L TF LV +G LG Sbjct: 276 LLTGGPGLMVAVIAVYGVLNFVIQSLLQPRFVGDAVGLSVTVTFLSLVFWAWLLGPLGAV 335 Query: 330 IGPVLMALIAVIW 342 + L L + Sbjct: 336 LAIPLTLLAKALL 348 >gi|326569354|gb|EGE19414.1| hypothetical protein E9U_06901 [Moraxella catarrhalis BC8] Length = 369 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 120/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K AP ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVIAPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTDSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|289628956|ref|ZP_06461910.1| PerM family membrane protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651062|ref|ZP_06482405.1| PerM family membrane protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868046|gb|EGH02755.1| PerM family membrane protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 356 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRLPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVAEEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|83942810|ref|ZP_00955271.1| Conserved hypothetical membrane/transport protein [Sulfitobacter sp. EE-36] gi|83846903|gb|EAP84779.1| Conserved hypothetical membrane/transport protein [Sulfitobacter sp. EE-36] Length = 365 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 121/344 (35%), Gaps = 19/344 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + + + ++ +++ + V+ YF K P++ ++ T P+ + Sbjct: 2 EHLPSIRRSLQLLVLISLFVTAYFAKDLILPIVLGFLLALTLSPVGRALYRIGVPHPVSA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGM--LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T + + + V LL + E+ E+ ++ + + Sbjct: 62 FLLVTATSLVIAAVVLLSAGTVAIWSDEIPEMGREIQIKLSGVSNAVETMRS--ASEEVE 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L T+ PQ + + L T A S+ ++I F Sbjct: 120 KLGTETGGKPQEVVVRQPGLLDTAMDTVSKTGA------------SLAVILILALFLLGS 167 Query: 181 GFSISQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +L L V K + L + I G+++G+ + G+P Sbjct: 168 GELFYLKLVQSMPTLTEKKRALHTVYDVEKRVSRYLLTIATINAVLGILVGTYLTVLGLP 227 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLR 297 S G+ ++ +P G V+ + L+ + L G + L +++ + Sbjct: 228 SAYIWGIAAFMLNFLPYIGGFAGVLLVAGFSLVTFDTIGYAMLAPIGYLTLTLLEGQIIT 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P+LVG +++ + F +V G+ G + + + V+ Sbjct: 288 PWLVGRRLEMNTVAVFLTVVFWGWLWGIPGALVAVPFLVVFKVV 331 >gi|298486116|ref|ZP_07004180.1| predicted membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159361|gb|EFI00418.1| predicted membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 356 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRLPEMAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|150016078|ref|YP_001308332.1| hypothetical protein Cbei_1194 [Clostridium beijerinckii NCIMB 8052] gi|149902543|gb|ABR33376.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 322 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 119/326 (36%), Gaps = 25/326 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +L+ +F+K +F P LS +II PIY I K S A+ Sbjct: 9 KKLFSLLLSFVFVLIGTFFIKYYFKPFLSMIIIIIVCAPIYKIMIKAKMPSKIAGALSIV 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +V Y E+ ++ K+ +L+++ + + L Sbjct: 69 TVNIIIILV-----TIYLGSEIFYIIKKL------------YLTNLEWIEKFIQDISVAL 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + ++ + I + A G L Y + I FF D I + Sbjct: 112 NVNFNNLEIGKSVISIINDQNIRKGAVNTGDSVLAYFIGN----ICAFFILIDKSKILEL 167 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L ++ ++I I+ I + + + + GV + ALG++ Sbjct: 168 ISMLLPKEMMMKFRDQKENFTQMIGI----EGILVIISTMEIIMGFCILGVSNFFALGIV 223 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ ++P I I I F + I + ++ + L +G + + Sbjct: 224 CGILDILPYVGTIIVFIPIIIYNIIMKNFLTAFGLICLYILVQVIREILEAKFLGDKLDM 283 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPV 333 L + GV+ G+LG+ IGP+ Sbjct: 284 HPLVILLSIYIGVKIFGVLGILIGPM 309 >gi|90962471|ref|YP_536387.1| hypothetical protein LSL_1500 [Lactobacillus salivarius UCC118] gi|90821665|gb|ABE00304.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118] Length = 351 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 125/355 (35%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R+ ++ ++ LY + +L I F + + K + S + Sbjct: 7 QRFLGNERLRRFTVLLFLVGVLYLARSMMNLILLTFIFSFLVISLNDAIRKKIDIPSKLI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ + + + + + LV+ +V H G + Sbjct: 67 VIIVYLLMIGGIYLAITIYLPKLVTQTENLVNYIVKFYNHPP---------KGTNDVINM 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T+++S +K + G+ I ++ + G ++ I ++ FFF D Sbjct: 118 VTQYISQSDIMKQMR------GGMSIIVKYLANIGT----MGMTFIMALLLSFFFTIDKD 167 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + S + + ++ ++I IIA+ + + +P Sbjct: 168 DLFKFSKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMP 227 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L ++ M+MIP G IS + + G + + + + + L P Sbjct: 228 QLFSLALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVRYIIYIIIMLCVVHALEAYVLNP 287 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +LP TF L G+ GL +G + + I I+ + Sbjct: 288 KLMSSRTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 342 >gi|56413554|ref|YP_150629.1| transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362478|ref|YP_002142115.1| transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127811|gb|AAV77317.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093955|emb|CAR59447.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 344 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 114/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ L ++ L +L N+ +P++ S + + E W Sbjct: 66 SLLIVIIVMLMVLLLAYLGTSL--------------NELARTLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ + SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQ----LPNAMSSIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|224540904|ref|ZP_03681443.1| hypothetical protein CATMIT_00055 [Catenibacterium mitsuokai DSM 15897] gi|224526137|gb|EEF95242.1| hypothetical protein CATMIT_00055 [Catenibacterium mitsuokai DSM 15897] Length = 419 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 59/190 (31%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F S G F+ S + L + + + + H I Sbjct: 187 FVSNVGGSFITAITSFFMALYLLANKEKHLEQGRKLIAYILGHKRAGIAFDIMSEANHYF 246 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 S G + A L + A L G+P + ++ + + +P + L+ Sbjct: 247 NSFVTGQMLEATCFMLEVYIAMRLFGMPFPELIAIMAFLFSFVPMFGNFITFFAGLILVA 306 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + P +VG + + L G+ G++G+ IG Sbjct: 307 AAQSKSMLAFAIIYLCLQQFEGNVVYPKIVGKSVGIGGLFVLLGITIFGNLWGVIGILIG 366 Query: 332 PVLMALIAVI 341 L ALI + Sbjct: 367 VPLTALIYAV 376 >gi|329896026|ref|ZP_08271262.1| Putative permease PerM (YfgO) [gamma proteobacterium IMCC3088] gi|328921986|gb|EGG29350.1| Putative permease PerM (YfgO) [gamma proteobacterium IMCC3088] Length = 363 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 120/346 (34%), Gaps = 12/346 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + ++ +++ + L + L AP+++ALI+ + + + S Sbjct: 10 DRYLFEEESVLLLVLISVTLFLMMVLGAVMAPIVAALILAYLVQGVSTRMQS-VGLPKWM 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + A + +F +L LF ++ L S+ + L D + + Sbjct: 69 GFIAAYGLFLAVFFGSILGLFPLVWRQLATLASEFPRMVKEVQAALSVLPDRYPQFISEQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ Q + L ++ IP + +I + + +FFF +D Sbjct: 129 QIVDLIASVQRELAPAGQKLLELSLNSIP--------GLFGVMIYLILIPLLVFFFLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ L P ++I + I + G I + G V A+ G+ Sbjct: 181 DVITGWLSGQLPKERPLL-RRIWAEMDLQIANYARGKAIEVLIVGSVSYIAFLTLGLNYA 239 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPF 299 LG++ + +IP GA + V + + I N L + + I+D L P Sbjct: 240 ALLGLLVGLSVIIPYVGATLVTIPVVLVAFFQWGIGNEFYTVLAVYLVIQILDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + L + ++ GL G F L LI I Sbjct: 300 LFSEAVNLHPVAIILAVLFFGGVWGLWGAFFAIPLATLIKAIMNAW 345 >gi|213963730|ref|ZP_03391980.1| membrane protein [Capnocytophaga sputigena Capno] gi|213953610|gb|EEB64942.1| membrane protein [Capnocytophaga sputigena Capno] Length = 358 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 120/347 (34%), Gaps = 24/347 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMC 72 +++ + L +LY L+ ++ +L++ P+ F + + +S T ++ + Sbjct: 17 IVLVVLGLYTLYLLQSIIIYLIVSLVLTLMGKPLIQFFYKRLKIKSKTVCVILTMTIFIL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + K L + + I + +K + Sbjct: 77 LALSVFSLFIPLLVSQGKNLSGLNIDLLKTNID-----------NLIQQTLSKVGLQKED 125 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + L IP F + F D+ + ++ FFF +DG I L S Sbjct: 126 YSFGVQEMLNFID---IPNFLNSFISFISDFGVGAFSVLFISFFFMKDGEKILIALLSTF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K + ++ F+G+ + ++ + GV + + ++ A++ Sbjct: 183 STHRKRKLKTSIFKINNLLSRYFVGLILQITILFVIYTVILLIFGVENAFIIALLCALLN 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNI--------FNATCLFLWGAIELFIVDKTL-RPFLVGG 303 +IP P+ + L + N+ T L G + +VD +P + Sbjct: 243 LIPYVGPMIGFVLMALLTMSSNLQNDFMSVSLPTTIYVLVGFLIGQLVDNVFSQPLIFSN 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +K L F + G++G+ + ++ V+ KE K Sbjct: 303 SVKSTALEIFLITLISGTLFGMVGMVVAIPAYTVLKVVLKEFFPNNK 349 >gi|300865893|ref|ZP_07110634.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336102|emb|CBN55792.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 350 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 14/307 (4%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G+ +W+ +L SLY L + +A+I+ + +A Sbjct: 2 GLGKWIGFLALLASLYILWKIRTIVLLFFTAVILAIALNRLVRRLQQS-GAKRGVAIALA 60 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ V L + + +EL V L + WL G + Sbjct: 61 IAILVTASAVLLTLIVTRLSNQFQELSQLVPLGIEQLRIWSNWLQARLPGQIVD-----N 115 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L L +TF + + ++ +L ++ + + + + Sbjct: 116 LPSIDDLTQEIQTFFR-----WTTSHIYQWFSNYLSLIINTLLITVLTIMLLVNPMPYRH 170 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + SL + +I + + G+ + G+ ++ VP G+ Sbjct: 171 AIISLFPAFYRQRADEIFSKCEEGLMGWLAGVALSMSFIGITSIIGLFVLQVPLPFVNGL 230 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+A+IP I + L + + A + L + I + P ++ + Sbjct: 231 LAFILALIPYIGAILSVIPPLLLALLDSPSKAGAVLLLYFLIQQIEGNLVTPIIMEKQVS 290 Query: 307 LPFLPTF 313 L T Sbjct: 291 LLPAYTL 297 >gi|293376684|ref|ZP_06622910.1| putative membrane protein [Turicibacter sanguinis PC909] gi|292644702|gb|EFF62786.1| putative membrane protein [Turicibacter sanguinis PC909] Length = 385 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 119/323 (36%), Gaps = 6/323 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 F+ GF L I+ F ++ FI ++S +++ ++ +F V + F+ Sbjct: 50 FIIGFIIAYLINFILKFYEDRVFKKFIKGSKKSLRGVAVILSYLTASLIFYVFIQFVVPQ 109 Query: 85 GMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + LV+ + + + + L++ L L+ + + T L Sbjct: 110 LVESITGLVNDIPRYLYDMKVILEQTLNETDISPEYMTLINDKLTEITNWVLQLVTNLLP 169 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + FAS I L +S+ ++ FF + + ++ + Sbjct: 170 IIGGIVMAFASSVWNIILGIIISVYLLVDKEKFFALGKKVVVALFNDKHANIILNLANRT 229 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + K I G I + G++ + +P + + VI + +IP P Sbjct: 230 NLTFGKFIG----GKIIDSAIIGVLTFIILTIFKMPYSLLISVIIGMTNIIPFFGPFIGA 285 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S +++ + A + + I + P ++G I + F ++ + Sbjct: 286 IPSAIIILFISPIKAVWFGIIILVIQQIDGNIIGPKILGDSIGISAFWILFAILVAGKLF 345 Query: 324 GLLGLFIGPVLMALIAVIWKESI 346 GL+G+ IG + ALI I K+ I Sbjct: 346 GLVGMIIGVPMFALIYSIVKDVI 368 >gi|289676514|ref|ZP_06497404.1| PerM family membrane protein [Pseudomonas syringae pv. syringae FF5] Length = 356 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 110/343 (32%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +++F+ + L G APV++ L++ F + S + + ++ Sbjct: 15 DEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLERLRMPEVAAVGLVF 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ F+ + + + P L+ + H Sbjct: 75 TL-----------FIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + E G F+ + ++ + ++ + I +FFF +D I Sbjct: 124 LVSDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + A +++ + + I + G I G V A+ G+ L Sbjct: 184 GRWARGYLPR-ERALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYAALL 242 Query: 245 GVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I + G ++ I L G L + I + L P L Sbjct: 243 AMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G+ G+F L L + Sbjct: 303 EAVNLHPVAIICAVLLFGGLWGVWGIFFAIPLATLFKAVLDAW 345 >gi|116327615|ref|YP_797335.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331774|ref|YP_801492.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120359|gb|ABJ78402.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125463|gb|ABJ76734.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 355 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 132/348 (37%), Gaps = 22/348 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++F +VSL+ L+ P++ AL+I +T + + S +++ +M Sbjct: 20 LIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLESLGVPR-----ILSIAILMLF 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +P+ + ++ + W D+ + T +L + Sbjct: 75 TSIPIYLFINSVASPIASTLN---------PLLKNWKQDLDDAKFKYLTVTVNLQFNEFP 125 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII----FMIIALFFFYRDGFSISQQLD 189 +ET I I F+ Y ++I + F F +G I + L Sbjct: 126 ASWNETIRPDELIKKIAELMHEQVKGFVSYIPTLIGYLLITPLFAFLFLLNGNGIYKSLI 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL + + I+ + + + + + I ++ V +++ G+P G+ Sbjct: 186 SLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIFGLFLG 245 Query: 250 IMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTL-RPFLVGGPI 305 I IP PI + + L+I G + + + + I+D L +P ++ G + Sbjct: 246 IANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVVISGSM 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + + G +GL+G+ I + A++ V + ++K++ Sbjct: 306 SLHPIVIVGAVTVGGAALGLVGMLIAVPMAAILKVTIQTLYSSMKDHN 353 >gi|260905264|ref|ZP_05913586.1| predicted permease [Brevibacterium linens BL2] Length = 436 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 104/314 (33%), Gaps = 28/314 (8%) Query: 12 MRWMIMFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 R +++ + + L + L+ APV AL +P+ K + A Sbjct: 36 ARALVIALTIAGLAYALMFFKGLQDIVAPVFLALNFYIVVYPLQKYLTKLKVPRA-IGAT 94 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + V+ + + + + S +LSDI S + Sbjct: 95 ISVLLVLVMIFGFFGLTAWSVAELVLLIPSYGEQLVATYQSALSFLSDI---GVTSSVLQ 151 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ + + + + ++A+FF D I Sbjct: 152 QQFQQFNVRSLIDAVYPLLTNVSLVAGLLTTV--------------VMAVFFVAMDSMGI 197 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L + + P+ + V R + + ++ A + VP Sbjct: 198 DRRMLMLLD-VKPSLAASLGGFASGVRRYWVVATVF-GLIVAVLDVIALAIIDVPLIWVW 255 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+ + IP G I ++ L+ +A + + ++ F++ ++P G Sbjct: 256 GVLAFLTNYIPNIGFVIGLIPPALLALVDSGWQSALWVVIAYSVLNFVIQSIIQPKFTGE 315 Query: 304 PIKLPFLPTFFGLV 317 + + L +F L+ Sbjct: 316 SVGVTPLVSFLSLL 329 >gi|227543837|ref|ZP_03973886.1| permease [Lactobacillus reuteri CF48-3A] gi|300908905|ref|ZP_07126368.1| membrane protein [Lactobacillus reuteri SD2112] gi|227186214|gb|EEI66285.1| permease [Lactobacillus reuteri CF48-3A] gi|300894312|gb|EFK87670.1| membrane protein [Lactobacillus reuteri SD2112] Length = 344 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 8/203 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +GI + G I + + +S+I FF+ + +++ S + F +++ I Sbjct: 131 HGITIAVSTLTSIGAITVSFVMSLILS----FFYTLELKQMNEFSHSFLDSDFGWFFQDI 186 Query: 204 S---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + IAI ++ +P AL +I I +++P G Sbjct: 187 DYFGKKFVNTFGVVLEAQFFIAICNTVITTIGLLFMRMPQIFALSLIVFIFSLVPVAGVI 246 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS +++ G I + + + I + L P + LP TF L+ G Sbjct: 247 ISTIPLAMVGYSVGGIRDVVYIIIMIIIIHTLEAYVLNPKFMSSRTDLPIFYTFIVLLIG 306 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G GL +G + + + Sbjct: 307 EHLFGTWGLIVGVPIFTFLLDVL 329 >gi|90425501|ref|YP_533871.1| hypothetical protein RPC_4026 [Rhodopseudomonas palustris BisB18] gi|90107515|gb|ABD89552.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 374 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 112/329 (34%), Gaps = 16/329 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ +I+ +LY K FF PV++A ++G P + +I T+ Sbjct: 37 LLIIVIVAALYVAKPFFLPVVTAFVVGTMLSPAAGLMERHRIPRPVSAVLIVTLV----- 91 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + L +V + G + L + +W + + Sbjct: 92 ---FGMVAFIVALISAPVVEWSNRLPELGSMLKDKLQSL---DRPIAMWHQLQGSLGGID 145 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ++ I+++ + L ++ +++ + + + Sbjct: 146 SSTGPAIQFPKIEWVQPTYEFLSPTLTETLLFLVTLVLFIA---SWSDLRRGLVMTFASR 202 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I + + L +T+I +G G+ G LAG+P+ ALG + A + Sbjct: 203 ETRLRALRILNEIEGSLGGYLLTVTLINLGYGIATGIICALAGMPNPAALGALAATLNFF 262 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE--LFIVDKTLRPFLVGGPIKLPFLPT 312 P P + + I L A F+ + P ++G + L L Sbjct: 263 PIVGPFVMFVILTVVGIVSFPTLGGGLVAPMAFVGLTFVEGHFITPTIIGRRLSLNTLAV 322 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F L G +G F+ L+ + V+ Sbjct: 323 FIALAFWTWLWGPMGGFLASPLLIVALVV 351 >gi|313899413|ref|ZP_07832923.1| putative membrane protein [Clostridium sp. HGF2] gi|312955701|gb|EFR37359.1| putative membrane protein [Clostridium sp. HGF2] Length = 369 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 110/305 (36%), Gaps = 11/305 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ P + ++ + P+ K + S++ +++ L+FL Sbjct: 44 MLRSILQPFIIGFVLAYVMHPLVEFLEKKGIPKN--------FSIIAIWVCVLVFLIVML 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ M L K+ I W+S+ + + ++ S ++ + +++ + Sbjct: 96 VMLMPVLYDKINEFMTSMIDGVVWISNKIKTLGNMKDFSLVNSITNNIVNILQSY--DDW 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L+ +++F II + D I + L HLF Sbjct: 154 VPQLVSSLPGLMNTVLNVVTNVLFSIIIAIYMLFDFERIKRGLRKFV-HLFFKNSDIYLH 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + + I+ + + + + Y++ G + +G++T+ +IP ++ Sbjct: 213 EIDQNVTVYLKSLIILMLIKFIEYSAFYFMIGHQDWLIIGLLTSFGVIIPYLGGTIANSI 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + N L + I + + P + + L T F + G MG Sbjct: 273 GIITALTLPPSNIVALIIGIMILSNVDAYVISPLVHEKRSAMGPLITLFAVFAGGVIMGA 332 Query: 326 LGLFI 330 +G+ + Sbjct: 333 VGIMV 337 >gi|312912463|dbj|BAJ36437.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 344 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 116/328 (35%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + +A Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMTRCRIPR--VIA 64 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V + ++ + +VPLL + E+ +P++ S + + E W Sbjct: 65 VSLLIVIIVMLMVPLLAYLGTSLNELAR-------------TLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|85711713|ref|ZP_01042770.1| Permease PerM [Idiomarina baltica OS145] gi|85694573|gb|EAQ32514.1| Permease PerM [Idiomarina baltica OS145] Length = 360 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ + A I +S+ LF + + + + + + Sbjct: 54 WPVNRLIDAGMG---RLAATIIVMSLTICIATLCLFTLVPVVWQQSTTLIRELPDMLANL 110 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID-FIPRFASRFGMIFLDY 163 V WL +P EL+ + Q +++ + G+ I + + + Sbjct: 111 QV--WLHKLP------ELFPSVIDESQITELMLTVKRRVVGLGEQILTSSLTSLVNVMAM 162 Query: 164 CLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + +I + + +FF +D ++ ++ L ++++ + IR L + + Sbjct: 163 LVYLIVVPLLVFFMLKDRNTLLAHFSRILPTNRRLITQVGQEMNLQIMNYIRGKALEVIV 222 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNA 278 +A+ + ++ + L ++ + +IP GA + V++ L G Sbjct: 223 VAV----TSFAVFFAFDLRYTTLLSILVGLSVLIPYIGAVVVTIPVALVALFQFGATGPF 278 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + I + L P L + L + ++ G G+F L +L+ Sbjct: 279 IYVMIGYLIIQALDGNVLVPLLFSEAVSLNPVYIIAAVLIFGGIWGFWGVFFAIPLASLV 338 Query: 339 AVIWKES 345 + Sbjct: 339 KAVITAW 345 >gi|326564423|gb|EGE14651.1| hypothetical protein E9O_06681 [Moraxella catarrhalis 12P80B1] Length = 369 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTDSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|88798200|ref|ZP_01113786.1| hypothetical protein MED297_13117 [Reinekea sp. MED297] gi|88778976|gb|EAR10165.1| hypothetical protein MED297_13117 [Reinekea sp. MED297] Length = 334 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 109/327 (33%), Gaps = 28/327 (8%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + PVL A + + P + + + + + +V LL Sbjct: 21 AGLKVAQPIVMPVLVAFFLAALTSPAVNLLVRFR----------MPLGIAITVVVVLLIG 70 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH--PQSLKILSET 139 F+Y + + G ++L +P ELW L P ++ + + Sbjct: 71 FFYALGRV------------LGNSTEQFLDRLPDYQHQLELWLVQLKDKVPWLIEDIEQR 118 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + D R +I+ ++ L F + + S++L Sbjct: 119 IAEFQPTDSAIAIVGRLFSGVGSVLTAIVLIVFTLIFTLLESRNASEKLRIA---FGDDK 175 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGA 258 + K+++ L ++I++ G+++ GV + G +M IP G+ Sbjct: 176 TIGYIKRFSKMVQRYLLVKSLISLATGILVAILLIFLGVDYPILWGTFAFLMNFIPNVGS 235 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ I ++ + I+ + P L+G + + L F LV Sbjct: 236 LLAAIPPMILAGLQLGLPGFLITTGGFVAINMIIGNLIEPRLMGKTLDISPLIVFLSLVI 295 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKES 345 +G +G+ + L +I + + Sbjct: 296 WGWILGPIGMLLSIPLTVVIKIALEVY 322 >gi|326566730|gb|EGE16869.1| hypothetical protein E9K_00398 [Moraxella catarrhalis 103P14B1] gi|326575270|gb|EGE25198.1| hypothetical protein E9W_04713 [Moraxella catarrhalis CO72] Length = 369 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTDSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYA 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|221068171|ref|ZP_03544276.1| putative phytochrome sensor protein [Comamonas testosteroni KF-1] gi|220713194|gb|EED68562.1| putative phytochrome sensor protein [Comamonas testosteroni KF-1] Length = 871 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 122/354 (34%), Gaps = 26/354 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E + + ++ MI I++++LYF + P+ A++ GF P S K+ Sbjct: 79 LAEMLPALRLLIGLMIASIVILALYFGRDLLIPLALAMLFGFLLDPAVSRL--KRWGLPR 136 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP----GG 116 + I V+ + L + ++ + + + R +++P G Sbjct: 137 MASAIVVVAFALAALGGLGMYLGSQVQQLSADLPTYQSTIRDKLRSLRKSANMPSAWDGV 196 Query: 117 MWASELWTKHLSHPQSLKILSETF--------LKTNGIDFIPRFASRFGMIFLDYCLSII 168 K ++ S + + T + ++ R A + I+ Sbjct: 197 FKTYNTVEKEIASVDSARARVQKVEVQTPDSKPTTRMLQWLGRIAEPVTTAGIVLLFVIL 256 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++ D +L +L + S+ + K +R F I+ + G+ Sbjct: 257 ILLDRD-----DLRDRLLRLVGGNLNLATDALDEASQRIGKYLRMQF----IVNVSYGVP 307 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGA 286 L L GVP + GV+ AIM +P P+ + +++ + Sbjct: 308 LAMGLLLIGVPGAILWGVLGAIMRFVPYVGPMMSAVFPLALAFAVDPGWNMFLLTLGLIL 367 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + I + + P+L G L L G +GL + P+ + L+ Sbjct: 368 LLELISNNVIEPWLYGSSTGLSTLSIIVAATFWTALWGPIGLILSTPLTVCLLV 421 >gi|194333691|ref|YP_002015551.1| hypothetical protein Paes_0858 [Prosthecochloris aestuarii DSM 271] gi|194311509|gb|ACF45904.1| protein of unknown function UPF0118 [Prosthecochloris aestuarii DSM 271] Length = 402 Score = 65.2 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 122/362 (33%), Gaps = 15/362 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 + + + + Q + R IL ++ L G P + AL++ F P+ + + + Sbjct: 42 LIQPLRDNQFVERLFWGLNILFGIWLFSELSGLLTPFIIALVLAFLFEPLMNGLL-RLNM 100 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A + TV + ++ + L +M S V L + W+ Sbjct: 101 PRLLSAFLITVFGVGGIVLMVALLSPEIGRQMTAFGSIVPLIPDYLQAFINWIFSFEIFT 160 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W S H + +F + I+ F+F Sbjct: 161 WFSIDVDAVKQHIIQSINEQLDNIGMLASNFTQTLWKSIPKVITTITTIILL-PFLTFWF 219 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D S + + ++ + ++ G I+ I E + + + + G Sbjct: 220 LNDFNRFSDAMARMLNKKPALSIRRYVPMAKDILNQYIRGQLIVMIIEITLYSTFFSIIG 279 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN------IFNATCLFLWGAIELFI 291 + + LG+++ +P + A++ ++ G+ ++ A+E+ Sbjct: 280 INYSLLLGILSGAALWLPYIGISTAIALTSLVISLGSNPMEQFVWAGLTYLSIQALEIL- 338 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + P +VGG ++L + F + G+ G+ I + A I + +E + K Sbjct: 339 ---FMVPKIVGGKVQLNPIILFLSIFTFGYFFGIGGILISIPVSAFIIALVREKLYQEKS 395 Query: 352 NK 353 + Sbjct: 396 ER 397 >gi|229136256|ref|ZP_04265004.1| hypothetical protein bcere0014_51260 [Bacillus cereus BDRD-ST196] gi|229170140|ref|ZP_04297828.1| hypothetical protein bcere0007_50740 [Bacillus cereus AH621] gi|228613317|gb|EEK70454.1| hypothetical protein bcere0007_50740 [Bacillus cereus AH621] gi|228647194|gb|EEL03281.1| hypothetical protein bcere0014_51260 [Bacillus cereus BDRD-ST196] Length = 344 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 8/279 (2%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ Y ML ++ I + + + + ++ + Sbjct: 66 IIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHME 125 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G+D + + + G L LS+I + FF + I E Sbjct: 126 LSKYVGQGVDILYKSITNVGKFGLQVLLSVILSL----FFLLEKARIVAFTSKFKESRLA 181 Query: 198 AYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ +I K RS +IAI ++ A W+ G P + L ++ ++ +I Sbjct: 182 IFYNEIEYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLI 241 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G IS + + G I + + + + L P + LP TF Sbjct: 242 PVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLNPKFMSQKTNLPIFYTF 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +G+ GL IG + + + + ++++ Sbjct: 302 MILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|29653987|ref|NP_819679.1| riboflavin transporter [Coxiella burnetii RSA 493] gi|154706622|ref|YP_001424066.1| riboflavin transporter [Coxiella burnetii Dugway 5J108-111] gi|161831036|ref|YP_001596575.1| hypothetical protein COXBURSA331_A0764 [Coxiella burnetii RSA 331] gi|29541250|gb|AAO90193.1| riboflavin transporter [Coxiella burnetii RSA 493] gi|154355908|gb|ABS77370.1| riboflavin transporter [Coxiella burnetii Dugway 5J108-111] gi|161762903|gb|ABX78545.1| putative membrane protein [Coxiella burnetii RSA 331] Length = 363 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 121/342 (35%), Gaps = 34/342 (9%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + PV+ ++++ + + + AV +++LF+ G Sbjct: 41 FFGKYLLPVVISVVLAYLFASPVRWLERWRFPH--WAAVT------------IVYLFFLG 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++ Q + + + P + + W H ++ N Sbjct: 87 IFLLALFGLLPLMWKQ----LASMVHEFPKAITKGQAWMTEYMHRYPKLFPTDPI--ANL 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMII-----------ALFFFYRDGFSISQQLDSLGEH 194 ++ + ++R G L + L+ I II +FFF +DG SIS L Sbjct: 141 AGYLHQQSARIGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGGSISNWLSRFLPE 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + I + G I I +V A+ L G+ LGV+ + ++ Sbjct: 201 RQGL-IRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFALLGLQYAFLLGVLLGLSVIV 259 Query: 255 P-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P GA + ++I L++ G + L + AI + + L P L + L + Sbjct: 260 PYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLLFSEAMDLHPIVI 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+F L L+ + A E Sbjct: 320 ILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNE 361 >gi|186681974|ref|YP_001865170.1| hypothetical protein Npun_F1538 [Nostoc punctiforme PCC 73102] gi|186464426|gb|ACC80227.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 388 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 4/207 (1%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I ++ + L I+ ++ F+ + G + + L F A + + R Sbjct: 153 LQAIAGQVLNLAVVTVTSLLDILLTMVLTFYLLQHGSELWESLVEWLPSKFRAPFSQTVR 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ F+ I++ L + VP + G+ +MA++P G A+ Sbjct: 213 L---SFQNFFITQLILSTCMASALIPTFLWLKVPFGLLFGLTIGLMALVPFGGS-VGIAL 268 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ + + + I I++ + P ++G L + ++ G R GL Sbjct: 269 TTLLVALQDFSMGVRVLIAAVIVQQILENLIAPRILGSFTGLNPVWILISVLTGARIGGL 328 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 LG+ + +I +A + N Sbjct: 329 LGVIVAVPTAVVIKTALSALRLAGETN 355 >gi|326563701|gb|EGE13952.1| hypothetical protein E9M_02143 [Moraxella catarrhalis 46P47B1] Length = 369 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTNSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYA 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|156743476|ref|YP_001433605.1| hypothetical protein Rcas_3538 [Roseiflexus castenholzii DSM 13941] gi|156234804|gb|ABU59587.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 406 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 9/277 (3%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + LF + L+ + + ++L + A V RW+ + G+ Sbjct: 87 LIYLALFAILLVVILSFVPTITQQLTTLTGSAPTTVESVVRWIGRLEEGLQRFGFRGDLT 146 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + Q I + T + + + +I ++I F+ DG I + Sbjct: 147 AIVQPEAITRQL---TGIGSAMLQQSLGIAGSIATVLFNIFLVLILSFYITLDGPRIGKS 203 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + +V +V + ++ G+ L G+ VI Sbjct: 204 FIMLLPRSWHDEMDGLFAVVDRVFGGFMRAQFVNSLLYGIANAIVMALFGLSDIALASVI 263 Query: 248 TAIMAMIP-GGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 AI+ IP G + +++ L + + + L F + P LVG Sbjct: 264 AAILVFIPLVGGFFALIPPALFAILFVPDRVGWLVLVLLAVQQVQF---NVIMPRLVGQA 320 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L L F L+ G G G+ G + +IA I Sbjct: 321 IGLHPLLVFAALLLGGTVAGGWGVLFGIPVAGVIASI 357 >gi|163943119|ref|YP_001648003.1| hypothetical protein BcerKBAB4_5231 [Bacillus weihenstephanensis KBAB4] gi|163865316|gb|ABY46375.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 344 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 8/279 (2%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ Y ML ++ I + + + + ++ + Sbjct: 66 IIIALLYVMLVAAIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHME 125 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G+D + + + G L LS+I + FF + I E Sbjct: 126 LSKYVGQGVDILYKSITNVGKFGLQVLLSVILSL----FFLLEKARIVAFTSKFKESRLA 181 Query: 198 AYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ +I K RS +IAI ++ A W+ G P + L ++ ++ +I Sbjct: 182 IFYNEIEYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLI 241 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G IS + + G I + + + + L P + LP TF Sbjct: 242 PVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLNPKFMSQKTNLPIFYTF 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +G+ GL IG + + + + ++++ Sbjct: 302 MILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|326567508|gb|EGE17623.1| hypothetical protein E9Q_06383 [Moraxella catarrhalis BC1] gi|326576643|gb|EGE26550.1| hypothetical protein E9Y_01525 [Moraxella catarrhalis 101P30B1] gi|326577488|gb|EGE27368.1| hypothetical protein EA1_02853 [Moraxella catarrhalis O35E] Length = 369 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTNSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|323342143|ref|ZP_08082376.1| hypothetical protein HMPREF0357_10556 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464568|gb|EFY09761.1| hypothetical protein HMPREF0357_10556 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 364 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 97/301 (32%), Gaps = 13/301 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + + + PI + F K I V + L ++ + ++ Sbjct: 51 LLPFVIGFALAYIVRPI-AVFFEKYNIKRAISVPITLVLFVVLIVLLFSSILPSLYTDIS 109 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L+ + Q + ++ WA +++ + + + T L F+ Sbjct: 110 QLIGNSMDGIQQLYNYYKEINHNNPSPWADDIFKQVMGMLNGIVGQIPT-LPAAASQFLS 168 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + S + + + +F D + + + + ++ P I ++ Sbjct: 169 KIFSTITTGIFSFIIGM--------YFVFDYENFTGSVLRIANNISPKLGNSII-VIDHA 219 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + +I + Y G LGV+TA +IP P + I Sbjct: 220 VSRYLGTLVVIMTITCIEYSLLYLAVGHNYAFVLGVLTAFGLLIPYIGPTVVHVLGILTA 279 Query: 271 IKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + L + G + L VD + P + K+ L + F G +G+ Sbjct: 280 LTLPLPRVIILTI-GLVILSNVDGYVVSPMVYSKRDKIEPLWSLFAFFASSVLFGFVGIL 338 Query: 330 I 330 I Sbjct: 339 I 339 >gi|239628723|ref|ZP_04671754.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518869|gb|EEQ58735.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 353 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 104/343 (30%), Gaps = 21/343 (6%) Query: 11 IMRWMIMFIILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I+ ++ II V Y L P + AL I P S S+ + A Sbjct: 10 IISFIYFAIIGVICYILFKRLIPMLMPFIMALAIAAVLDPAVSFLGSRMKGGQKCAAAAV 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK- 125 + LF + L S + + + + + PG L Sbjct: 70 LLLF-------YGCLFSLAAVSGNWLFSCIQEQGRKLPALYSEVVE-PGLSRFFTLLEAS 121 Query: 126 ------HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 H+S + + + + + + F + I+ +IA FF Sbjct: 122 FPGHSIHISSLGTSLEHAMENAAGALSSSLIGYGASVLVGFPSLLVDILAAVIASFFLTG 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L A + V ++ L + + GVP Sbjct: 182 SYRQTVAFLMRQIPEKQRAILTVACASIRDVTGRLVKAYALLMALTFAELSVGFLILGVP 241 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + ++ ++P G + G+ L + + +V ++L P Sbjct: 242 MGFTAACLITLVDILPVLGTGTVLLPWAFIAWTTGSRSLGIGLVCLY-LLITVVRQSLEP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +VG + LP + G + +GL G+F+ P+ ++ + Sbjct: 301 KVVGLQMGLPPAAALLCMFVGGKVLGLPGIFLFPIGATVLFKL 343 >gi|218903075|ref|YP_002450909.1| hypothetical protein BCAH820_1958 [Bacillus cereus AH820] gi|218539607|gb|ACK92005.1| putative membrane protein [Bacillus cereus AH820] Length = 337 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFLSKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|259502008|ref|ZP_05744910.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259170009|gb|EEW54504.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 347 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 109/352 (30%), Gaps = 24/352 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R+ ++ +I+ +L+ ++ +L I+ + + + + + + Sbjct: 14 VRRFAVLAVIVFALWMMRSMMNMILFTFILTYI---VVNWVHLVRRWLPKLSPAVVVIIT 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L I+ L F Q+ + R + + + + Sbjct: 71 YALLILLLYFGIT-----------------QYLPVLVRQIIKMVNSVLKFYSTNDATNFY 113 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q + T + A + + +I FF+ + + Sbjct: 114 QYVNHYVSTGTIMTQLRHGLTIAVSTITSVGIVAFTFLLSLILSFFYTLELPQMESFSRL 173 Query: 191 LGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 E F +++ ++ + IAI ++ + +P AL ++ Sbjct: 174 FLESKFAWFFQDVAYFGKKFTNTFGVVLEAQFFIAICNTVITTICLFFMKMPQIFALALV 233 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +++P G IS +SI G I + + + + L P + Sbjct: 234 VFVFSLVPVAGVIISTIPLSIVAYSVGGIRDVIYIIIMVIVIHAFEAYVLNPKFMSSQTD 293 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP TF L+ G G GL +G + + I + K SS Sbjct: 294 LPIFYTFIVLLIGEHFWGTWGLIVGVPIFTFLLDILGVKSIHKTNRKRPQSS 345 >gi|218680915|ref|ZP_03528812.1| hypothetical protein RetlC8_19536 [Rhizobium etli CIAT 894] Length = 140 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 36/101 (35%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I S + F V+ + I+ +P++ A I V+ + L Sbjct: 33 IIALFAYWSFRLVAPFALIVIWSAILAIAMFPLHRMLARALGNRPVLSATIIVVACLLLV 92 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 I PL + + L++++ + P+ + + P Sbjct: 93 IAPLSLVAVNFADAAQALIARLRTDSFALPSAPQGIREWPV 133 >gi|213582219|ref|ZP_03364045.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 328 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 107/315 (33%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +IL + F P + AL I P+ + + V ++ L ++ Sbjct: 4 LVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIVIIVMLMVL 62 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L +L N+ +P++ S + + E W + S+ L Sbjct: 63 LLAYLGTSL--------------NELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDEL 108 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + + ++ SI +++ + F + + ++L + Sbjct: 109 AKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQLPEKLQQMMSR-- 162 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P + + + T I+I GLV V G++ + IP Sbjct: 163 PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLAFALNYIPN 222 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ I +L+ ++A + + + L P ++G + L L F Sbjct: 223 IGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLS 282 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 283 LIFWGWLLGPVGMLL 297 >gi|205352809|ref|YP_002226610.1| transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272590|emb|CAR37497.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627879|gb|EGE34222.1| putative transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 344 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 115/328 (35%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ +IL + F P + AL I P+ + Sbjct: 7 TLNGLKIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMTRCRIPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VIA ++ + ++ ++ L Y + EL +P++ S + + E W Sbjct: 62 VIAVSLIIVIIVMLMVLLLAYLGTSLNELAR----------TLPQYRSSLVIPLQRIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L++ + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + P + + + T I+I GLV V Sbjct: 168 LPEKLQQMMSR--PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ I +L+ ++A + + + L P ++ Sbjct: 226 WGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMR 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|110833634|ref|YP_692493.1| permease PerM [Alcanivorax borkumensis SK2] gi|110646745|emb|CAL16221.1| permease PerM [Alcanivorax borkumensis SK2] Length = 364 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 122/340 (35%), Gaps = 15/340 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F G APV +A+++ + + + + ++V +F++ + L Sbjct: 33 IAFFGGMLAPVFTAMVVAYLMQGLVGALERRGVRR--------MLAVNLVFVLFVGLLTA 84 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDI-PGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + + ++VL Q +P +I G+ A + S+ + + + Sbjct: 85 TLVVLLPMVWRQLVLLVQDQLPHMLKNGEIWLRGLPAHYPEVISMDQVNSIVAVIQREVA 144 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + + ++ + ++ + + +FFF +D ++ + Sbjct: 145 EAGQGVLTLSLASI-PNLVEIMVFLVLVPLLVFFFLKDRETLVNWMLGFLPR-KRRILSH 202 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + + I + G I + G A+ L + V L V+ + ++P GA + Sbjct: 203 VWHEMDGQIANYVRGKAIEILLVGGSTFIAFILLDMNYAVLLAVLVGLSVVVPYIGATVV 262 Query: 262 FTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V+ ++ A + ++G I FI L P L + L + ++ Sbjct: 263 TLPVAAVAYVQFGWGGDFALVMIVYG-IIQFIDGNILVPLLFSEAVNLHPVAIITAILLF 321 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL G+F L LI + + K++S Sbjct: 322 GGLWGLWGVFFAIPLATLIKAVINAWPRQADYSPGKLASQ 361 >gi|213580402|ref|ZP_03362228.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 194 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 3/185 (1%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + ++ + + +FF +D + + + ++ + + I + G + Sbjct: 1 MAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAG-QVWNEMNQQITNYIRGKVLEM 59 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAV-SIYLLIKGNIFNATC 280 + G+ + L G+ + L V+ +IP GA + V + L G Sbjct: 60 VVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWS 119 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F I + L P L + L L +V G G+F L LI Sbjct: 120 CFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKA 179 Query: 341 IWKES 345 + Sbjct: 180 VVHAW 184 >gi|226359623|ref|YP_002777401.1| hypothetical protein ROP_02090 [Rhodococcus opacus B4] gi|226238108|dbj|BAH48456.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 388 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 15/319 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 +G + A + P S + V + L + Sbjct: 78 RGVLVLIAVAAFLAIGLEPAVSWLVRH-GFPRWAAVATVFVVAFAMLAGFLAAAIPPMVT 136 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + LV P +L + + LS L+ L Sbjct: 137 QGAALVHNA----------PDYLGHL----EQRYPVLQELSARFHLQDELRRALDAGNAP 182 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + +++ +F D I L L + I + Sbjct: 183 MVLGGIVGAGKFVFSAISGTVIVVVLTAYFLADFGHIRASLYRLAPNSRRPRTILIGDEI 242 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + LG +I++ ++ VP + L V+ A++ +IP V Sbjct: 243 FAKVGGYVLGNLLISLITAVLTFVWLVAFDVPYPLLLAVLVAVLDLIPVVGSTLAGVVVA 302 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + ++ + ++ D L P ++G +K+P + T ++ G +G++G Sbjct: 303 LVALTVSLPVSLATVVFFIALRLFEDYLLVPRIIGRTVKVPPMVTVVAVLIGGALLGIVG 362 Query: 328 LFIGPVLMALIAVIWKESI 346 + + A + ++ +E++ Sbjct: 363 ALLAIPVAAAVLLLARETV 381 >gi|87118946|ref|ZP_01074844.1| hypothetical protein MED121_11790 [Marinomonas sp. MED121] gi|86165337|gb|EAQ66604.1| hypothetical protein MED121_11790 [Marinomonas sp. MED121] Length = 354 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 16/348 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++M + L FL APVL A+++ F + + + S ++ Sbjct: 15 DEEAVVFLLLMITCIAVLVFLGNILAPVLIAIVLAFLLQGVVNKVE-RMGLSHLSSVLVV 73 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +S + + + + L++ P+ L+D+ + + Sbjct: 74 FLSFSAACVAFIGIMVPVIWKQAGRLLN----------DAPQMLADLDAVVKTFAVEHLE 123 Query: 127 LSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S+ + N ++ F+ + + ++ + + +FF +D I Sbjct: 124 YVKQDSIDDVLGNMANELANVGQWVLSFSLSSIPSIMSLMIYMVLVPLVMFFLMKDQKQI 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + I++ + I + G I + G+ + + + G+ L Sbjct: 184 MVWFTAWLPSERRM-MRSIAQEMNDQIANYIRGKFIEMLVVGIATYAVFAVLGLRYAELL 242 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + +IP GA V + + G + + + + L P L Sbjct: 243 ALFVGLSVLIPYIGAAAVTVPVVMVAFYQYGTDTMFVYVLVAYLVVQALDGNVLVPLLFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L L ++ G G+F L L+ I K Sbjct: 303 EAVNLHPLAIIVAVLFFGGIWGFWGVFFAIPLATLVKAILNAWPSHTK 350 >gi|167648175|ref|YP_001685838.1| hypothetical protein Caul_4216 [Caulobacter sp. K31] gi|167350605|gb|ABZ73340.1| protein of unknown function UPF0118 [Caulobacter sp. K31] Length = 346 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 66/208 (31%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 HLS G ++ + + I ++ A + Sbjct: 110 LQSHLSTAPFGGAALAKLEDWRGFGWLVSLGPKLAADAAGGLVGTIIVLFAGLYLAYHPG 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S L +++ + + +R +G G+ G + GVPS Sbjct: 170 SYVGGALMLFPRPRRERARQVLDQIHRALRQWLMGQLCSMALVGVTTGVGLAIVGVPSAA 229 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ALG+I I +P P+ + + ++ + L + + + P ++ Sbjct: 230 ALGLIAGIGQFVPVIGPMVAPLPGLLVALEAGPQTLLWVGLVYLVSAQLEANLITPLVLR 289 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +LP T F ++ +G LG+ Sbjct: 290 QLAQLPMAVTLFAVLAMGVLLGPLGVLF 317 >gi|255023950|ref|ZP_05295936.1| conserved integral membrane protein [Listeria monocytogenes FSL J1-208] Length = 319 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 112/336 (33%), Gaps = 25/336 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R ++ ++ + LY L+ +L I F + + + + + ++ Sbjct: 5 TARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLIVIVLYSL 64 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V V ++ + ++ +LV +V + P + G K+L Sbjct: 65 VAIFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESNIQKYLQ- 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 G+DFI S G + L + L++I + FF + ++ Sbjct: 122 --------------TGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKERVTSFTG 163 Query: 190 SLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +K+ + +IA+ ++ A +L P ++L + Sbjct: 164 QFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTIITTIALYLMDFPQLLSLSI 223 Query: 247 ITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP I + + G + + + I I L P L+ Sbjct: 224 MVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLMSSKT 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LP TF L+ G+ GL +G + + I Sbjct: 284 NLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDI 319 >gi|229545953|ref|ZP_04434678.1| permease [Enterococcus faecalis TX1322] gi|307273353|ref|ZP_07554598.1| hypothetical protein HMPREF9514_02118 [Enterococcus faecalis TX0855] gi|307277498|ref|ZP_07558590.1| hypothetical protein HMPREF9521_03091 [Enterococcus faecalis TX2134] gi|307279172|ref|ZP_07560230.1| hypothetical protein HMPREF9515_01491 [Enterococcus faecalis TX0860] gi|307288140|ref|ZP_07568150.1| hypothetical protein HMPREF9505_01546 [Enterococcus faecalis TX0109] gi|229308916|gb|EEN74903.1| permease [Enterococcus faecalis TX1322] gi|306500876|gb|EFM70194.1| hypothetical protein HMPREF9505_01546 [Enterococcus faecalis TX0109] gi|306504297|gb|EFM73509.1| hypothetical protein HMPREF9515_01491 [Enterococcus faecalis TX0860] gi|306505763|gb|EFM74941.1| hypothetical protein HMPREF9521_03091 [Enterococcus faecalis TX2134] gi|306509880|gb|EFM78905.1| hypothetical protein HMPREF9514_02118 [Enterococcus faecalis TX0855] gi|315027394|gb|EFT39326.1| hypothetical protein HMPREF9494_00882 [Enterococcus faecalis TX2137] gi|315145673|gb|EFT89689.1| hypothetical protein HMPREF9495_00632 [Enterococcus faecalis TX2141] gi|315150661|gb|EFT94677.1| hypothetical protein HMPREF9499_01336 [Enterococcus faecalis TX0012] gi|315153331|gb|EFT97347.1| hypothetical protein HMPREF9502_01369 [Enterococcus faecalis TX0031] gi|315157941|gb|EFU01958.1| hypothetical protein HMPREF9508_02076 [Enterococcus faecalis TX0312] gi|315160240|gb|EFU04257.1| hypothetical protein HMPREF9513_03217 [Enterococcus faecalis TX0645] gi|315164244|gb|EFU08261.1| hypothetical protein HMPREF9516_02188 [Enterococcus faecalis TX1302] gi|315166662|gb|EFU10679.1| hypothetical protein HMPREF9517_02690 [Enterococcus faecalis TX1341] gi|315170054|gb|EFU14071.1| hypothetical protein HMPREF9518_02288 [Enterococcus faecalis TX1342] gi|315174444|gb|EFU18461.1| hypothetical protein HMPREF9519_00612 [Enterococcus faecalis TX1346] gi|315575580|gb|EFU87771.1| hypothetical protein HMPREF9507_00751 [Enterococcus faecalis TX0309B] Length = 319 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 106/333 (31%), Gaps = 23/333 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L I + + + + + + ++ V+ L + + + + Sbjct: 2 ITTILLTFIFTYLAVRLVHFVQRYMKIPTIVIVLLTYALVVFLIYLAITKYVPVLVNQTT 61 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 ++++ VV Q + L + S+ I Sbjct: 62 QMINSVVDFYQSPHTDTNQVLQFIDQYLEKSNLLSQLQNGASM---------------IL 106 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R+ G + L + +S I FFF + ++ + F +++ I K Sbjct: 107 RYIQDIGAVGLSFVMSFILS----FFFMIEKKQMADFSKLFLKSDFDWFFQDIYYFANKF 162 Query: 211 IRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVS 266 + + IA+ ++ A + G +L ++ I++++P I +S Sbjct: 163 VNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLPSLAIMIFILSLVPVAGVIISCIPLS 222 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +G + + + I L P + +LP TF L+ R G+ Sbjct: 223 FIAYSQGGLNDVIYILALITIVHLFESYVLNPKFMSSKTELPIFYTFVILLVSERLFGVW 282 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL +G + + K + + + N Sbjct: 283 GLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 315 >gi|206577122|ref|YP_002236155.1| hypothetical protein KPK_0272 [Klebsiella pneumoniae 342] gi|206566180|gb|ACI07956.1| putative membrane protein [Klebsiella pneumoniae 342] Length = 349 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 113/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + IIL ++ +L AL P+ + FI + F + ++ Sbjct: 14 LLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRR-GVRRPFAITLVVTAM 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L L + L + + + +L + Sbjct: 73 LVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFL----------------- 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + + +A+ SI+ +++ + F + + +L Sbjct: 116 -NLHINPERMLRRMDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKL-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L +I++ GL++ GV + GV+ + Sbjct: 174 FALNNPRLHIAGLHRALKGVTHYLALKT-LISLWTGLIVWLGLLAMGVQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G+ IS + L+ I+ + + ++ + P ++G + + Sbjct: 233 LNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMSA 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLVWGWLLGPVGMLL 313 >gi|182417575|ref|ZP_02948900.1| putative domain of unknown function [Clostridium butyricum 5521] gi|237669145|ref|ZP_04529129.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378588|gb|EDT76116.1| putative domain of unknown function [Clostridium butyricum 5521] gi|237657493|gb|EEP55049.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 323 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 117/326 (35%), Gaps = 25/326 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +++ ++ + +K +F P + LI+ P+Y FI K + + Sbjct: 9 KKIFSLILLLVFTVIVTFLIKYYFKPFMVILIMSIICMPVY-KFIIKLKVPEKLAGAVTL 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V L ++ ++++ ++++ S + + I +I Sbjct: 68 ITVNVLLVLIIVYMGGEIYSILRKVYSSNIEIINNIIQNISSAVNI-------------- 113 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + ++ + + A G L Y I FF D S+ Sbjct: 114 --DLNNLKIGKSVFSIINDTKLRQSAVSTGESILAY----FIANICTFFILVDKKSMLDV 167 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +I I+ + + + +++ +P + LG++ Sbjct: 168 IYRLFPEEIIKKFRRQKNNFVNMISI----QGILILISTIEIIFGFFILRIPKSLMLGLV 223 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++P I I I + + + I + IV + L +G + + Sbjct: 224 CGLLDVLPYVGTIIVFIPIIIYNIIMKNYLISFGLICLYILVQIVREILEAKFIGNKLDI 283 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPV 333 L F + G + G+LG+ +GP+ Sbjct: 284 HPLVIFISIYIGAKVFGILGILVGPM 309 >gi|254228523|ref|ZP_04921948.1| response regulator receiver domain protein [Vibrio sp. Ex25] gi|262392705|ref|YP_003284559.1| putative permease [Vibrio sp. Ex25] gi|151938905|gb|EDN57738.1| response regulator receiver domain protein [Vibrio sp. Ex25] gi|262336299|gb|ACY50094.1| putative permease protein [Vibrio sp. Ex25] Length = 356 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 121/344 (35%), Gaps = 34/344 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF K P++ + I P + K + TV V F+V + Sbjct: 25 GLYFAKPILLPIVLSTFISLLCSPFINYLEDKGLPRA------ITVVVTLSFLVGASIIG 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS------LKIL 136 M E P +W S++P + ++ + L I Sbjct: 79 LAAMSE----------------PAKQWWSELPSIVKNVSQEVSEVTQASADHLNTPLNIA 122 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S+ + G + + + ++ ++F G S+ ++ S Sbjct: 123 SDMGMDEVGNNTVFSLVKTLATTTPTILTQAMIVLFMVYFMLNHGRSLFRKSVSYLHGFA 182 Query: 197 PAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + K + +T++ G GL +G+ +++ G+ G +M P Sbjct: 183 KQRQAIELVKALQKDLSRYIGTITLVNAGLGLSVGAVFFVLGLEDPFLWGAFAGVMNFAP 242 Query: 256 GGAPI---SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P+ YL ++ F T + ++ + I + + P L+G L L Sbjct: 243 YLGPVISMVSFGFVAYLQLESVSFMLTVVSIY-LLINLIESQFVTPTLLGKRFNLNPLVI 301 Query: 313 FFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 F LV G +GL IG P+L+ + ++ + + +++ + Sbjct: 302 FVWLVFWGWLWGGMGLLIGVPLLVCINILVERLELCQSTQSQPR 345 >gi|126667512|ref|ZP_01738483.1| predicted permease [Marinobacter sp. ELB17] gi|126628104|gb|EAZ98730.1| predicted permease [Marinobacter sp. ELB17] Length = 357 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 114/341 (33%), Gaps = 12/341 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ +I+ + + + + AP +++LI+ F + + ++ K Sbjct: 15 DEEAVILGLILIVGTMFVIWFGAMLAPAIASLIVAFILQGLVTKMLAWKVPEP------- 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++++ +F++ L L M + +++ + + L + Sbjct: 68 -LAILIVFLLFLGILAGAIFGLMPLVWTQLSNLARETPRIIGELQSYLELLPERYPQLVS 126 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L ++ T + + S + + + I +FFF +D + Sbjct: 127 LDAVATVYQQVSTEVGQATQWLVTASLSSI-PDLFALLIYAVLVPILVFFFLKDRDVLLG 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + A +KI V + G + + G + + G+P L + Sbjct: 186 SIARMLPP-QRATMRKIWHEVNLQCANYVRGKALEILIVGTTTYITFKILGMPYAALLSL 244 Query: 247 ITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + +IP GA + V+I L G + + + + L P L Sbjct: 245 LVGLSVVIPYIGAAVVTVPVAIIGLFAFGWGSQFIWIMVAYGVIQALDGNVLVPVLFSEV 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + ++ GL G+F L ++ + Sbjct: 305 NNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAVVAAW 345 >gi|311745918|ref|ZP_07719703.1| putative transport protein [Algoriphagus sp. PR1] gi|126576125|gb|EAZ80403.1| putative transport protein [Algoriphagus sp. PR1] Length = 403 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + +++ ++ + +G I+ + ++ ++G+ + + Sbjct: 201 KVKLSILKFFSEENQKEAEEVMSHTVELGLNFIVGRFILIVFLAIIYSIGLSISGIENAI 260 Query: 243 ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDKTLRPFL 300 + VI A+++++P G I + I + G + L + F+ L P++ Sbjct: 261 LISVIAAVLSLVPFIGNIIGYVLAIIMAVFAGAELGGIIGVSLTFGLAQFVESYILEPYV 320 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 VG +++ L T ++ G G++G+ + + + +I+ Sbjct: 321 VGSKVEVNPLVTIMVVILGGAIWGIIGMILSIPIAGIAKIIFD 363 >gi|120554613|ref|YP_958964.1| hypothetical protein Maqu_1693 [Marinobacter aquaeolei VT8] gi|120324462|gb|ABM18777.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 358 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 120/356 (33%), Gaps = 16/356 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++++ V + + AP +++LI+ F + S +AVI Sbjct: 15 DEEAVILFLLLVTGTVFIIWFGAMLAPAIASLIVAFILQGLVSKLNRM--GVPELIAVIG 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V +V +F + + PR + ++ + H Sbjct: 73 VFVVFLGVLVGFIFGLLPLI---------WTQLSTLAGEAPRIIRELQSYLEVLPQQYPH 123 Query: 127 LSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L +S+ + + G ++ F+ + + ++ + I +FFF +D + Sbjct: 124 LVSAESVNTMYQQISAEVGHLTQWLVSFSLSSIPDLVALLIYMVLVPILVFFFLKDRRVL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L P +I V + G + + G V A+ G+P L Sbjct: 184 VNSFARLLPPQRPM-MVRIWHEVNLQCANYVRGKAVEILIVGGVTYVAFKFLGMPYAALL 242 Query: 245 GVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + +IP GA + V++ L G + + + I + L P L Sbjct: 243 SLLVGLSVVIPYIGAAVVTIPVAVIGLFAFGWGSHFIWVMVIYGIIQALDGNVLVPILFS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + ++ GL G+F L ++ ++ + I+ Sbjct: 303 EVNNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAVFAAWPVKESPPPPAIAE 358 >gi|310640166|ref|YP_003944924.1| transport protein [Paenibacillus polymyxa SC2] gi|309245116|gb|ADO54683.1| Putative transport protein [Paenibacillus polymyxa SC2] Length = 335 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 76/217 (35%), Gaps = 4/217 (1%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F+ T + + M ++ II FF + I++ Sbjct: 108 DRNQWNETIIEFMDTLNVQRLFEPGWNAVMKISQLGTQLLVSIILSLFFLMEKSYITRFT 167 Query: 189 DSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++K+ R+ +I++ ++ +A W+ G P+ + L Sbjct: 168 ATFVDSKLGWFFKEVGHFGRMFLGTFGKVLEAQLLISLINCILTTTALWIMGFPNLLGLA 227 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I ++ ++P G IS + + G I L + + I L P L+ Sbjct: 228 LIIFLLGLVPVAGVFISLIPLGLIAFSVGGINYVIYLVILIVVIHAIEAYFLNPKLMSSK 287 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LP TF L+ +G+ GL +G L + Sbjct: 288 TNLPIFFTFVVLIFSEHLIGVWGLIVGIPLFVFFLDL 324 >gi|88704180|ref|ZP_01101894.1| permease PerM [Congregibacter litoralis KT71] gi|88701231|gb|EAQ98336.1| permease PerM [Congregibacter litoralis KT71] Length = 362 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 112/317 (35%), Gaps = 12/317 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 AP+L+++++ + + + + + IA + M F LL L + Sbjct: 39 LAPLLASIVLAYLVQGVVN-LLCRLGLPPWLGFFIAFTAFMGAFFAVLLGLLPLVWRQSI 97 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L++++ G + L +++ + L+ Q + T + IP Sbjct: 98 GLITEIPRMIDQGRDLLEVLPGRYPDVFSQTQIDQLLAGVQGEIAGLGQKVVTVTLARIP 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F+ + ++ + I +FF +D I++ + S P +I + Sbjct: 158 --------GFMTLLVYVVLVPIIVFFLLKDRTQITRWVTSFLPERRPLL-SRIWAEMNVQ 208 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + G + I G ++ G+ LG++ + +IP GA + V+ Sbjct: 209 FSNYARGKMVEIIIVGAASYVSFTGLGLRYAALLGLLVGLSVIIPYIGAFLITVPVAAVA 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + + L + + I+D L P L + L + ++ GL G+ Sbjct: 269 LFQWGLTPEFYWVLAVYLVIQILDGNVLVPLLFSEAVNLHPVAIIVAVLFFGGIWGLWGV 328 Query: 329 FIGPVLMALIAVIWKES 345 F L LI + Sbjct: 329 FFAIPLATLIKAVINAW 345 >gi|323484056|ref|ZP_08089426.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323402498|gb|EGA94826.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] Length = 372 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 119/353 (33%), Gaps = 9/353 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ M++ + +++ L F+ + + I+ PI K L+ I Sbjct: 19 LIAAMLVLLTILTAGLLMPFWIALFLSAIL----QPITRLLSGKLGLKKKGLSTIVLFLF 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L L+F +L + I S + + Sbjct: 75 YLLLFCILIFGIAEVTNLFGDLFQSFPDYYKDTIVPALGSLGNSIEQIFSIIPNEFRPDM 134 Query: 131 QSLKILSETFLK---TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L+I T+++ + + FA F LS++ I+ +F ++ Sbjct: 135 AELQISIMTWIEKIVSAISQYGLTFAGNVISGFTSSILSVLMTILLSYFITVQYDTVVAF 194 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + I ++ + I+ + L + + + + + Sbjct: 195 LKCQLPDKIRTFGADIKPLLKNSVVKYLKATLILMFITFIELAVGLSIIKGSNPIGMALG 254 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI +P G I L+ GN A L + I + I+ L P ++G + Sbjct: 255 IAIFDALPVFGTGGIMIPWIIIELLSGNYALAGGLLI-LYIIITIMRNILEPKILGSQLG 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + ++ G R +G+LG+ P+ ++ V+ + + +N K+++ Sbjct: 314 INPIVVLLAVLIGGRLLGVLGMIFFPITAYVLTVLHDAGKIKLYKNPPKLNNQ 366 >gi|295098896|emb|CBK87985.1| Predicted permease [Eubacterium cylindroides T2-87] Length = 392 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 98/320 (30%), Gaps = 19/320 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS------SFISKKEES--STFLAVIAT 67 I+ ++L L F A + + + +K + L+++ Sbjct: 35 ILQVLLYILSICMPFLFGGGLAFVFNIIANNLMRAGNILFKIEERKIYRVIANILSIVIV 94 Query: 68 VSVMCLFI---VPLLFLFYYGMLE-----MKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ F+ VP +F ++ + + + W+ + + Sbjct: 95 LALFLGFVFLLVPQIFASLETIINNLPETLNSFYHWAYRTSSSIPSLHNWIQGLDLNVLD 154 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + + N + + S I L ++++F II LF Sbjct: 155 FDNLSNWFNDFINWIFSGGA---NNIFGSVYQVISTTFSIVLSTFVALMFSIIVLFNKST 211 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L + + R++ + G I G ++ L +P Sbjct: 212 VVKESKGLLRAYMPDDIYEKTLHVLRLIARTFTQYIGGTCTECIILGTLVTVGATLLNIP 271 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G+I + A++P + + + ++ +A + + + P Sbjct: 272 YATLVGIIVGVGALVPMFGALIAAIIGALFVATESVQSAVYFMIMFICIQQVEGNFIYPN 331 Query: 300 LVGGPIKLPFLPTFFGLVGG 319 +VG + P + + G Sbjct: 332 VVGRSVGFPPMYVIVAVTVG 351 >gi|312887141|ref|ZP_07746745.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311300453|gb|EFQ77518.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 362 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 118/317 (37%), Gaps = 16/317 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+L A PI+ K + + + + ++ + + + Sbjct: 38 IMPLLMAFFFSLMLMPIF-RLFRKLKIPESIAIFLPILLLIISLALVIWLFTSQVSALLD 96 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + +H + W+S+ G A +L + + S+ + G Sbjct: 97 DFPQIQRTVTRHLDSLSIWISNSFGYSPAEQL--------KFINEQSKKLFSSLGGMLSG 148 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S G+I L I +I L+ + + ++ R K+ Sbjct: 149 AAGSLSGVIIFIGLLPIYIYLIILYRNL-----FLKFILMWFNANEHLNVEEGIRQTEKM 203 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIY 268 ++S +G+ I ++LG A W+ G+ + + +G+I A + +IP + V + Sbjct: 204 VKSYLIGLLIQITYIIILLGGALWILGIQNALLIGIIFAFLNLIPYLGALIGNILGVLLT 263 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L I + + F+ + L P +VG +K+ L + G++ G GL G+ Sbjct: 264 LASSDKISDVLIVLGAITFVQFLDNNILMPRIVGSQVKINALVSIVGIIIGGVMAGLSGM 323 Query: 329 FIGPVLMALIAVIWKES 345 F+ +++++ +++ S Sbjct: 324 FLAMPIISILKIVFDRS 340 >gi|238791876|ref|ZP_04635513.1| AI-2 transport protein tqsA [Yersinia intermedia ATCC 29909] gi|238728980|gb|EEQ20497.1| AI-2 transport protein tqsA [Yersinia intermedia ATCC 29909] Length = 356 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 109/315 (34%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I+ + P L A+ + P+ + K + T V+ ++ L + Sbjct: 29 LVVIMAGIKAASPIVVPFLLAIFLAIVLNPL-VKLLEKIKIPRTLAIVLLVTIIILLMAL 87 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L N+ +P++ + M + + + S+ + Sbjct: 88 LFSRLGSSL--------------NEFARSLPQYRGMMLEKMRDLQEFAMRFNIEFSVDDI 133 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + ++F+ R S L ++ ++ LF R + + D+ Sbjct: 134 MKHVDPSTAMNFVTRLLSHLSGAMASMFLLLMTVVFMLFEVERLPYKMQLMFDN------ 187 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P I + + + TII+I G+V+ GV G++ ++ IP Sbjct: 188 PEQGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPN 247 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ I L+ +A + + I + P ++G + L L F Sbjct: 248 IGSVLAAMPPIIQALLFNGFADAFAVTCGYILINLIGGNIIDPRMMGRGLGLSTLVVFLS 307 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 308 LIFWGWLLGPIGMLL 322 >gi|187919985|ref|YP_001889016.1| hypothetical protein Bphyt_5287 [Burkholderia phytofirmans PsJN] gi|187718423|gb|ACD19646.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 677 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 114/356 (32%), Gaps = 31/356 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + ++ LYF P+ A+++ F P+ ++ + + +V A V Sbjct: 27 SLISLAVGVTVVACLYFASAVLIPITLAILLSFLVAPLANALMRLRLGH--VASVFAAVV 84 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + ++ + + + + L+ I + + L Sbjct: 85 ISVSVIGMLGAVIATQLTDLAAGMPRYQATIEQKMETAHSLT-IGKLNRFASAAGQALQR 143 Query: 130 PQSLKILSETFLKTNGIDFIPRFASR-----------------FGMIFLDYCLSIIFMII 172 D AS L +S + Sbjct: 144 ATVEPPQPAPQRGPASRDSARSTASEPAAVPVEVREPVPTPFELARRVLSPAISPLETAF 203 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFP----AYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 +F L LF + + + F+ + G G++ Sbjct: 204 IVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQLGLNAGVGVI 263 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG-AI 287 +G+ ++ GVPS + G++ A++ ++P + + ++ + + + +W A+ Sbjct: 264 IGTGLFMIGVPSPILWGILAALLRLVPYVG--IWISATLATALAAAVSPGWTMAIWSLAL 321 Query: 288 ELF---IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 + +V + + P L G L + G +GL + P+ + L+ Sbjct: 322 FVSVEVLVGQIVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLV 377 >gi|284801280|ref|YP_003413145.1| hypothetical protein LM5578_1030 [Listeria monocytogenes 08-5578] gi|284994422|ref|YP_003416190.1| hypothetical protein LM5923_0984 [Listeria monocytogenes 08-5923] gi|284056842|gb|ADB67783.1| hypothetical protein LM5578_1030 [Listeria monocytogenes 08-5578] gi|284059889|gb|ADB70828.1| hypothetical protein LM5923_0984 [Listeria monocytogenes 08-5923] Length = 348 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 114/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVVIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|16802989|ref|NP_464474.1| hypothetical protein lmo0949 [Listeria monocytogenes EGD-e] gi|47096236|ref|ZP_00233834.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254832306|ref|ZP_05236961.1| hypothetical protein Lmon1_13209 [Listeria monocytogenes 10403S] gi|254898878|ref|ZP_05258802.1| hypothetical protein LmonJ_03655 [Listeria monocytogenes J0161] gi|254911633|ref|ZP_05261645.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935959|ref|ZP_05267656.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|16410351|emb|CAC99027.1| lmo0949 [Listeria monocytogenes EGD-e] gi|47015381|gb|EAL06316.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258608547|gb|EEW21155.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589582|gb|EFF97916.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 348 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 114/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|254827894|ref|ZP_05232581.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258600275|gb|EEW13600.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] Length = 348 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 114/345 (33%), Gaps = 25/345 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G+ GL +G + + I + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|172057436|ref|YP_001813896.1| hypothetical protein Exig_1411 [Exiguobacterium sibiricum 255-15] gi|171989957|gb|ACB60879.1| protein of unknown function UPF0118 [Exiguobacterium sibiricum 255-15] Length = 290 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 63/207 (30%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + S T L N I ++ + F DG + L Sbjct: 53 SMKSATALLGNVFSSIAGSVIWLIQFIASTVFTLFIALFLYIFMLFDGKKLPNALVQFIP 112 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I + + IRS I+ + W VP + LG+ + Sbjct: 113 VGYRKEALLILKDMNGTIRSYVRAQLIVCSFVWSLATLVLWWLDVPYFLPLGLFIFATNI 172 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++ + + + I + + P + G +K+ + Sbjct: 173 IPYLGPFLGAAPAVLIGFLDEPIKGLYVIIGITIVQQLDANVISPLVQGKSLKVHPITIT 232 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV 340 L+ + G+LG+ + AL V Sbjct: 233 VVLLVAGQLAGILGMLLAVPFYALAKV 259 >gi|326561048|gb|EGE11413.1| hypothetical protein E9G_04324 [Moraxella catarrhalis 7169] Length = 369 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTDSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVIRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|309804578|ref|ZP_07698643.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|308165970|gb|EFO68188.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] Length = 181 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 72/176 (40%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG I+ L S + K+ + + S G I+A G++ Y Sbjct: 1 MLKDGKKINPYLTSFMPPRLQNVFSKLLHDMNIAVSSYVRGQLIVAFWVGVMFAVGYTTI 60 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+ + L ++ A + +IP + +I + I + +F+ IE I + + Sbjct: 61 GLKYGLTLAILAACLNLIPYFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFI 120 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P ++G +K+ + T L+G GLLG+ + A I +I + ++N Sbjct: 121 SPLVMGSKMKMNPVTTILLLIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 176 >gi|118591666|ref|ZP_01549062.1| hypothetical protein SIAM614_22022 [Stappia aggregata IAM 12614] gi|118435659|gb|EAV42304.1| hypothetical protein SIAM614_22022 [Stappia aggregata IAM 12614] Length = 375 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 118/341 (34%), Gaps = 33/341 (9%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + +L + FAPV ++++G P +L+ V + + Sbjct: 35 ILCVIAVTAALDIGQVIFAPVCLSIVVGTIFAPPVERLSRL--GVPGWLSAGGMVLLFIV 92 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP--GGMWASEL--WTKHLSH 129 FI+ F +P+ WL +P ++L W S Sbjct: 93 FILTAGAAFV--------------------VPLSDWLDRLPLIWSRLQAQLISWQGFFSS 132 Query: 130 PQSLKILSETFLKTNGIDFIP----RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 SL+ + G + + +I + + +FF G + Sbjct: 133 VASLQEDLRNAVGQKGGMQVSVEDNSAVESVFYFAPAFVAQVILFLASFYFFLLTGPHLR 192 Query: 186 QQLDSLGEHLFPAY-WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L R + + + + +++I G G + + WL GVPS + Sbjct: 193 RAALQLSSDGEGRRSIVTAFRTIETRLSTYLISISLINAGLGAAVALSMWLLGVPSPLLW 252 Query: 245 GVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVG 302 G++ ++ ++ G I +S L GN A + L +++ + + P ++G Sbjct: 253 GMMACVLNYVVYLGPAIMVLLMSAVGLATGNTPLAILTPPLTYLALNLIEAQFVTPTVLG 312 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L F + + G +G F+ L+ ++ + + Sbjct: 313 RTMTLNPFLVFLAIAFWIWLWGPIGGFVAVPLLLVVGTVLE 353 >gi|103486275|ref|YP_615836.1| hypothetical protein Sala_0783 [Sphingopyxis alaskensis RB2256] gi|98976352|gb|ABF52503.1| protein of unknown function UPF0118 [Sphingopyxis alaskensis RB2256] Length = 365 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 105/313 (33%), Gaps = 22/313 (7%) Query: 9 QGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + M +I+ I + L FF V +A+++G I S + + + Sbjct: 29 RVAMAAVIVIAIAGVAWLAVSLTRFFMLVFAAVVLGAVFDAIASWLVRRARVGRGIALAL 88 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ +F + E+ + +V P + E + Sbjct: 89 SVAGIVAVFAGAFILFGSQLAREIDTIREQV-----------------PQALRGVEAFLD 131 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L+E + + I + A + + + +++A F D + Sbjct: 132 RYGLGARVRELAE--VGSEDISQLVSQAGGYALAAGSGIADFVLVLVAGIFLASDPATYR 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L L A + ++ +G + ++ + + L GVP+ LG Sbjct: 190 RGLLLLVPARAEATAALALDDAARGLKGWMIGQAVSSLVVAALTWAGLALLGVPAAGGLG 249 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I ++ +IP PI ++ L + A + + + L+P + + Sbjct: 250 LIAGLLDVIPMIGPIIAGIPAVLLAFTVSPMTALWTLILFLVIQQLQGNFLQPMIQKQAV 309 Query: 306 KLPFLPTFFGLVG 318 +P F +V Sbjct: 310 DVPPAVLLFAVVA 322 >gi|300867990|ref|ZP_07112629.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334011|emb|CBN57807.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 402 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 83/238 (34%), Gaps = 10/238 (4%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFA 153 A Q +P W+ + + L P +L + + A Sbjct: 108 FTQAQQLVARLPEWIDSGQRQLLIFDDRINALGLPINLDGFIAQINTRLKGELQLVAGRA 167 Query: 154 SRFGMIF----LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + L ++ ++ F+ I + L F + + R+ Sbjct: 168 LNITLNLTVLTVVRLLDLLLTVVLTFYLLLHSSDIWESLIEWLPPRFQKPFSETLRL--- 224 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ F G IIA L SA+ VP + G+ +MA++P G + V+I + Sbjct: 225 SFQNYFTGQLIIATCMAFGLTSAFIFLKVPFGLLFGLTIGLMALVPFGGSVGIGLVTILV 284 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 ++ NI + I IV+ + P ++G L F ++ G R G LG Sbjct: 285 ALQ-NIGLGLQVLAVELIVQQIVENLIAPRVLGSVTGLNPFWVFVSILTGARVGGFLG 341 >gi|194292084|ref|YP_002007991.1| hypothetical protein RALTA_B1335 [Cupriavidus taiwanensis LMG 19424] gi|193225988|emb|CAQ71935.1| conserved hypothetical protein; putative membrane protein (DUF20, UPF0118) [Cupriavidus taiwanensis LMG 19424] Length = 402 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 110/341 (32%), Gaps = 14/341 (4%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +++ +L SLY + + F PV+ A+++ + P+ + + + + + I Sbjct: 51 RASTALMVLAVLFSLYAMHVARDFLVPVVIAVVMAYLLDPLVCAL-QRLGLARSLASTIV 109 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWT 124 ++++ LL Y +++ +V+ + L MW T Sbjct: 110 LLALLSA----LLSGAYLLQGQVESMVNSLPEMASKLSRSLGALLSGDDSMWQKIRRAAT 165 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 Q + I + + ++ L+F G + Sbjct: 166 VLSGTGQPPPARGTQVVVEQSSGHINNMLLAGSVSVFTMAAQAVVVVFLLYFLMLAGDTF 225 Query: 185 SQQLDSLGEHLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + V IR + + G G+ GV + Sbjct: 226 KRKFIKMVGTTISEKKISVHMLDEVNLSIRRYMGMLVVTNAGLGVCTWVLLKWLGVDNAG 285 Query: 243 ALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + A + ++P G I+ + + G + A + ++ + ++ Sbjct: 286 SWSIAAAALHLVPYFGALAIALCLGMVTFMQFGTLGMAAAAAGGSLLIATLIGSVITTWM 345 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G ++ + F L+ G+ G+ + L+ + V+ Sbjct: 346 TGRMARMNAVAVFVALLLFTWLWGVWGMLLAIPLITIAKVV 386 >gi|307692101|ref|ZP_07634338.1| hypothetical protein RbacD_03894 [Ruminococcaceae bacterium D16] Length = 426 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 101/364 (27%), Gaps = 40/364 (10%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPI----YSSFISKKEE------SST----------- 60 L L P+ L++ F PI Y + + Sbjct: 38 ALLDTLAYILRPIFYGLVLAFLLLPIQRGIYEFLLEWLKGVWVNWPRKNGMLRFVSILLS 97 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV-----SKVVLANQHGIPVPRWLSDIPG 115 + V ++ ++P L+ G++ + Q + + +P Sbjct: 98 LAFAVLVVYILLAMVLPQLYSSIVGLVNAFPGYIDSVQQWLTDFFQDNPDLQEAV--LPY 155 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGID--FIPRFASRFGMI------FLDYCLSI 167 ASE K + L + PR F + + + Sbjct: 156 YNSASESLEKWFTENGLLSNFQSADATMEWLQTELFPRLTGVFTSVYAGLWALVMLLKDL 215 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS----RIVPKVIRSTFLGMTIIAI 223 + +I + + Q + +F R +++ G + ++ Sbjct: 216 LIAVIVSVYVLVRKDKFAAQTKKITYSIFSTRIADFLVEETRSAYRILSGFINGKLLDSL 275 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G++ L P + L VI + +IP P L++ + + Sbjct: 276 IIGIIALVCCNLLKFPYPMLLAVIIGVTNVIPFFGPFIGAIPCALLILLVSPLQCVYFCI 335 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + I L P ++G L F ++ G G+ +G + A+ + Sbjct: 336 FVLILQQFDGNILGPKILGDSTGLDSFWVLFSILLFGGLFGFAGMVLGVPVFAMFYSVIS 395 Query: 344 ESIM 347 + Sbjct: 396 RLVR 399 >gi|323465615|gb|ADX69302.1| Permease [Lactobacillus helveticus H10] Length = 344 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 115/339 (33%), Gaps = 17/339 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + R+++ II+ LY ++ +L I + + + T V+ Sbjct: 9 KNNIPLRRFVVFLIIVAFLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYVPKMPTGAIVV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T ++ L L+++ + M LV ++ + + +A+ +K Sbjct: 69 VTYLII------LALLYFFITVYMPMLVGQISKMVKSVMAFYESAESSRLLSYATHYISK 122 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + Q+ + + F A+ G + + +S+I + + S Sbjct: 123 NEIITQA----------KHAMTFAFHTATSIGTLTITTFMSLILSFLYTIELKKMREFSS 172 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IAI + + +P VALG Sbjct: 173 LFVKSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLTIMKMPQIVALG 232 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I++++P G IS +S+ G I +F+ I I L P + Sbjct: 233 LMVFILSLVPVAGVIISLIPLSMVGYSVGGIRYVIYIFVMIMIIHAIEAYVLNPKFMASK 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ G GL +G + + + Sbjct: 293 TELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLN 331 >gi|312881830|ref|ZP_07741601.1| hypothetical protein VIBC2010_06219 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370476|gb|EFP97957.1| hypothetical protein VIBC2010_06219 [Vibrio caribbenthicus ATCC BAA-2122] Length = 357 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 13/310 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ +S+ T ++ + + +V + L ++ L++ V Sbjct: 54 WPVVQ--LSRLSLPRTLAVILVILGFTSIMLVAIFGLVPTIWEQVGNLINDVPNMYVG-- 109 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 L + + +H +SL ++ + G + + + Sbjct: 110 -----LQSVIAELPRRYPELEHFQIIESLVSNAKNQVIGVGETVVKGSLASL-VSLATLG 163 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + +I + + +FF +D + Q K+ + + I + G + + Sbjct: 164 VYLILVPLLVFFLLKDKQQLVQMASGFLPR-NRRLATKVWDEMNEQISNYIRGKVMEILI 222 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY-LLIKGNIFNATCLF 282 G V + + + V L V + +IP GA V+I L G + L Sbjct: 223 VGTVSYVTFAVLDLRYSVLLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLSSDFYWLL 282 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 AI + L P L + L + ++ G G+F L L+ +W Sbjct: 283 AAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 Query: 343 KESIMAIKEN 352 E+ Sbjct: 343 SALPSHEDED 352 >gi|295396780|ref|ZP_06806915.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] gi|294970364|gb|EFG46304.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] Length = 405 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 121/325 (37%), Gaps = 28/325 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFIS 53 M P + R++I+ + L L F L+ APV AL + P+ + IS Sbjct: 1 MATDSARPAMLPRFLIIVLGLAGLAFGIQFIQGLQTIVAPVFLALNLVVVVHPLQAYLIS 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K+ +A TV ++ +V L + + E+ ++ L+ + Sbjct: 61 KRV--PAIVAASITVVIVLALLVVFFALNAWAIAELVIVLPSYSHK----------LAQL 108 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G T P+ ++ F ++ D + + S I L+ + M Sbjct: 109 YG--EVIRFTTSWGLTPEVIQNQLSAFDFSSMTDAVLQVLSNVSAIL--ALLTTVVM--T 162 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +FF D +L +G+ + R + +R ++ TI + + A Sbjct: 163 VFFVIMDSLQFPARLREVGK--VAPQFSFAMRSFGQGVRRYWVVATIFGLIVAVFDVIAL 220 Query: 234 WLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 W+ GVP + GV+ IP G I ++ L++G ++A + + F++ Sbjct: 221 WIIGVPLALVWGVLAFTTNYIPNVGLIIGLIPPALMALLEGGWWDAFWVVVAYLTLNFVI 280 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLV 317 ++P G + + +F L+ Sbjct: 281 QAIIQPKFTGESVGVTPFISFLSLL 305 >gi|227893788|ref|ZP_04011593.1| permease [Lactobacillus ultunensis DSM 16047] gi|227864396|gb|EEJ71817.1| permease [Lactobacillus ultunensis DSM 16047] Length = 365 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 110/337 (32%), Gaps = 27/337 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R+++ +I+ LY ++ +L I + + + T + V+ T ++ Sbjct: 36 RFIVFLLIVAFLYEMRAMTNTILLTFIFTYVIVHLIHLVQRYLPKMPTGVIVVITFLIIL 95 Query: 73 LFIVPLLFL-FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ + ++ +++ V+ + T+++S + Sbjct: 96 ALLYFVITVYLPMLAAQITKMIKSVMAFYESN-----------ESSRLMSYVTRYISKAE 144 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ---- 187 ++ A ++ +I FF+ + + + Sbjct: 145 LIEQAKHAM----------TIAFHTATSIGTLTIATFMSLILSFFYTIELDKMREFSALF 194 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S + + IAI ++ + +P +ALG++ Sbjct: 195 VRSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTVLTMIGLAVMKMPQIIALGLM 254 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I++++P G IS +SI G I +F+ I I L P + + Sbjct: 255 VFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKFMASKTE 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G GL +G + + + Sbjct: 315 LPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLD 351 >gi|56751011|ref|YP_171712.1| hypothetical protein syc1002_c [Synechococcus elongatus PCC 6301] gi|81299329|ref|YP_399537.1| hypothetical protein Synpcc7942_0518 [Synechococcus elongatus PCC 7942] gi|56685970|dbj|BAD79192.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168210|gb|ABB56550.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 387 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 104/337 (30%), Gaps = 9/337 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + L+ L+ + +A+++ + + S + + + + Sbjct: 12 ILAAAYILWQLRQVMLLLFAAVVLAVIINHLARQLQQRLRWSRRTSLAVTLLGITIGGGL 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIP-----VPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ +EL+ + + + +PG + S + Sbjct: 72 LIALLLPPLLVQFQELLRLAPQGFAKLLTWVEERLVDVVKILPGFSDDRSARSFVDSTIR 131 Query: 132 SLKILSETFLK----TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + + R L ++ +I+ + + + Q Sbjct: 132 DLIQGFGDRRNWSSFSQQLGPLARNFLSIFNNTLAAAAQLLLVIVLMLMMLSNPQAYRQT 191 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + ++ + FLG+ I + ++ + GV + +I Sbjct: 192 FLRLLPSFYRRRADEVLSACEISLSDWFLGILISSSAIAILSWLGLVILGVKLALVNAII 251 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP P I +++ + A + + I + L P ++ + L Sbjct: 252 AGFLNLIPNLGPTLSAVFPISIVLLDEPWKAWVVLVIYIIIQQLESYWLTPTIMARQVSL 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 T + GL GL + L + V +++ Sbjct: 312 LPALTLIAQIVFASIFGLAGLILALPLAVVAKVFFEQ 348 >gi|170748558|ref|YP_001754818.1| hypothetical protein Mrad2831_2140 [Methylobacterium radiotolerans JCM 2831] gi|170655080|gb|ACB24135.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 700 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 107/361 (29%), Gaps = 39/361 (10%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ +LYF + F P+ AL++ F P ++ AV +V + + L Sbjct: 47 IIAALYFGREIFIPIAIALLLSFVLTP--LVNRLRRLRLPRLAAVGVSVLLTVGIVAALA 104 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIP---------VPRWLSDIPGGMWASE--------- 121 L ++ V + + I V +++++I + ++ Sbjct: 105 TLIGIQAADLAGDVPRYRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAKEAGSPETQS 164 Query: 122 ---------------LWTKHLSHPQSLKILSETFLKTNGIDFIPRF--ASRFGMIFLDYC 164 + P+ + + L S + Sbjct: 165 AAQQSATPPSTPPSTPPSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLSTVLTPVMHPL 224 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 ++ + + L F + ++ L K + F+ + Sbjct: 225 ATVGIVFVVLLFVLMQREDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYFVVQLALNAA 284 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLF 282 G+V+G ++ GVP+ V + A+M +P + +++ + + Sbjct: 285 FGVVIGIGLYIIGVPNPVLWAIFAALMRFVPYLGAVLSAILPMALAAAVDPGWNMMIAVA 344 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + + P G L + G +GL + L + V+ Sbjct: 345 ILFIVLEPLTGQVFEPIFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLG 404 Query: 343 K 343 + Sbjct: 405 R 405 >gi|169829929|ref|YP_001700087.1| hypothetical protein Bsph_4506 [Lysinibacillus sphaericus C3-41] gi|168994417|gb|ACA41957.1| UPF0118 membrane protein [Lysinibacillus sphaericus C3-41] Length = 350 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 132/358 (36%), Gaps = 22/358 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G R++I+ I ++LY ++ +L II + + + + + Sbjct: 6 QSNGFKRFIILVGIAIALYLMRSMINLILLTFIITYLMNQLTTKTTKSIRKYTPMNEKAV 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV++ L + ++ + + + Q + ++ +E+ Sbjct: 66 TVTLYLLLVAGIVAVI----------YKYLPIVTQQVTQLFDLIASFNLDPDDNEI--AR 113 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P KI +L G+D + + G I + +S+I + L + I + Sbjct: 114 YLAPTFEKIELGKYL-EQGVDITLKNITNIGKIIMQILISLILSLFIL----LEKKRIIE 168 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +++ IRS IIA ++ A + G P +A Sbjct: 169 FTAKFKDSKIGPLYDELNYFSRIFIRSFGKVIEAQFIIAAVNCVLSVIALSIMGFPHLIA 228 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++ I+ ++P G IS +SI G + + + + I L P L+ Sbjct: 229 LGIMLFILGLVPVAGVIISLIPLSIIAYSIGGLMYIVYILVIVMVLHAIEAYFLNPKLMS 288 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISSN 359 LP TF ++ +G+ GL IG P+ M L+ ++ S K+ + + + Sbjct: 289 AKTDLPIFYTFMVILFSEHFLGVWGLIIGIPLFMFLLDILGVTSSEETKQKMDAVENK 346 >gi|237731440|ref|ZP_04561921.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906979|gb|EEH92897.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 351 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 112/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL I P+ + + ++ Sbjct: 14 TLNGLKIVIMLGMLVIILSGIRFAADIIVPFILALFIAVVLNPVVQRMVKLRIPRVIAVS 73 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + VM + ++ L N+ +P++ S + + E W Sbjct: 74 LLIVIIVMLMVLL---------------LAYLGTSLNELARTLPQYRSSLVIPLKNLEPW 118 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L + + + ++ SI +++ + F + Sbjct: 119 LQRAGIGVSVDELVKYIDPNAAMTLVTNLLAQLSNAMS----SIFLLLLTVVFMLLEVPQ 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + P + + + T I+I GLV V Sbjct: 175 LPNKLKQMMSR--PIEGMAAIQRAIDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 232 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ +L +++A + + + L P ++G Sbjct: 233 WGLLAFALNYIPNIGSVLAAIPPIAQVLAFSGLYDALVVLAGYLVINLVFGNILEPRIMG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 293 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 320 >gi|313647227|gb|EFS11679.1| hypothetical protein SF2457T_4227 [Shigella flexneri 2a str. 2457T] Length = 339 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + +A V Sbjct: 4 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITIV 58 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E +S + N+ + + Sbjct: 59 VVVMLIALTALVGVLAASFNEFISMLPKFNKELT--------------RKLFKLQEMLPF 104 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + S++ +++ + F + + ++ Sbjct: 105 LNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 163 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 164 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 222 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 223 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 282 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 283 MVVFLSLLIWGWLLGPVGMLL 303 >gi|71274561|ref|ZP_00650849.1| Protein of unknown function UPF0118 [Xylella fastidiosa Dixon] gi|71901343|ref|ZP_00683438.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|170730816|ref|YP_001776249.1| permease [Xylella fastidiosa M12] gi|71164293|gb|EAO14007.1| Protein of unknown function UPF0118 [Xylella fastidiosa Dixon] gi|71728887|gb|EAO31023.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|167965609|gb|ACA12619.1| permease [Xylella fastidiosa M12] Length = 385 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 135/338 (39%), Gaps = 16/338 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++ +L + L P + ++ +G+ P+ F S +AV ++ L Sbjct: 19 YVLVGGVLWMAWLLTPVLIPFVLSVFLGWLGDPLVKRFE--WAGVSRAMAVCFVFFLVVL 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQ 131 +V +L +F + +VV + W+ + IP + + P+ Sbjct: 77 LLVLVLMIFVPLIE------RQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPE 130 Query: 132 SLKILSETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + G + + SR G + + + +++ + I F+F RD +++ Sbjct: 131 QMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILGFYFLRDWDKWVERVA 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + +++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 191 AAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLKLGLLIGLIAG 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +++ IP I+ +++ +I ++ + + + + L P +VG I Sbjct: 251 LISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKI 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + F ++ G + G +G+ + A++ V+ + Sbjct: 311 GLHPVAVIFSVMAGGQLFGFVGMLLALPGAAVVNVLLR 348 >gi|22299806|ref|NP_683053.1| hypothetical protein tlr2263 [Thermosynechococcus elongatus BP-1] gi|22295990|dbj|BAC09815.1| tlr2263 [Thermosynechococcus elongatus BP-1] Length = 344 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 109/313 (34%), Gaps = 16/313 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ A I+ F + ++ + +A++ ++++ ++ +L L + + + Sbjct: 41 INILVIAAILAFLLNQVVIRLSARGLQRRQAIALVLLMTLVVASVL-MLLLLPLAIQQAE 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL++++ R L + L + + +P Sbjct: 100 ELLNQLPELADTSNQNLRHLDQL--------LRRYQFPVGVNDLMEELAIQIKGITALLP 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A F D L +I + LF+ G I + L L + R+ Sbjct: 152 SVAITTVTRFFDTLLVLILTVYMLFY----GSGIWRGLIQLVPKPWRQGVDDALRLN--- 204 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 IRS F + + L L V +I + +IP L+ Sbjct: 205 IRSFFSAQLFLGLFMFLALIPFMVALQVNFGFLFALIIGVAQLIPVVGATLGLGFVTLLI 264 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + A +FL + I D L P L+G + L L F L+ G R G LG+ + Sbjct: 265 LFQDAWLALNIFLIAVVLQQIKDNVLAPKLLGNLMGLNPLWQFIALLIGARVAGFLGILL 324 Query: 331 GPVLMALIAVIWK 343 L A + ++ + Sbjct: 325 AIPLAATVKMVLE 337 >gi|154500526|ref|ZP_02038564.1| hypothetical protein BACCAP_04199 [Bacteroides capillosus ATCC 29799] gi|150270757|gb|EDM98053.1| hypothetical protein BACCAP_04199 [Bacteroides capillosus ATCC 29799] Length = 359 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 102/319 (31%), Gaps = 4/319 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + P L AL + + P + + A + TV + L L + + Sbjct: 29 VLLPWVLPFLLALGLAWLMEPAVKMLMGRFRLRRGLAAALTTVGLALLLCGALGLVLWRV 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS--ELWTKHLSHPQSLKILSETFLKT 143 E+ L+ ++ + + + D + I L Sbjct: 89 GYELALLLGRLPVLLSGLPALGDHVGDWAYRFIVALPVQLQDFAKDALDGFIRQGISLPA 148 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D + A+ D L + +A FF + L + K Sbjct: 149 KLYDVLAGIAAGAAAAVPDAMLFLFTTALAAFFTSAARPQVLSFLSRQIPVSWRDRLGKA 208 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISF 262 ++ + ++ + L + + V + L + A++ +P G Sbjct: 209 VPVLKTSLGGWLRAQGLLMLVTFGELTVGFLILQVDLALLLAALVALVDALPVFGTGTVL 268 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++ L+ G+ A L + + + V L P LVG LP L F + G R Sbjct: 269 LPWALFSLLSGDWKLAIGLAVLYGL-VSAVRSLLEPRLVGQKAGLPPLAALFAMYVGFRA 327 Query: 323 MGLLGLFIGPVLMALIAVI 341 +G+ G+ + P+ + + Sbjct: 328 LGVWGMILSPLAAIFLKQL 346 >gi|254416119|ref|ZP_05029874.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196177052|gb|EDX72061.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 336 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 77/201 (38%), Gaps = 3/201 (1%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L +++I + + FF D + + + P K+S + + Sbjct: 139 TIVLAILSELLTQFVNLILIAVVAFFMLLDRGRLWSFI---LQRFPPPLRNKLSLAIQRN 195 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 F G +++ G+ + L +P + L I + +IP + ++ Sbjct: 196 FLGFFWGRLLLSAFFGISAFVIFVLFRIPYALVLAAIAGVFDLIPAIGATLGITIVALIV 255 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + I + + + + L P ++ G + + + FF L+ G R GLLG+F+ Sbjct: 256 LPQGILLSITVLAICVTLQQVEENLLMPRIMQGSLDMNPVVMFFALLVGARVAGLLGVFL 315 Query: 331 GPVLMALIAVIWKESIMAIKE 351 L ++ +++ + M K+ Sbjct: 316 AIPLAGVMISLFEINEMKGKD 336 >gi|157135530|ref|XP_001663484.1| hypothetical protein AaeL_AAEL013335 [Aedes aegypti] gi|108870200|gb|EAT34425.1| conserved hypothetical protein [Aedes aegypti] Length = 807 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 8/228 (3%) Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + L + I + G L + I L++ + + Sbjct: 580 ADSLWILLRTNLTLLASAIGTLVSVILGGGHAVLKFLFHTIIFFTTLYYLLQSSQ---DR 636 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ +I + + I S + +A+ GL + + G V+ Sbjct: 637 YAPTAITINNSWGPRIIQALEDSISSVVVATLKLALFHGLFTWLTHTIVGAHIVYLPAVL 696 Query: 248 TAIMAMIPGG-APISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I+A P + + L + + F L L I + + + GG Sbjct: 697 ASILAAAPFLESYWCSVPAFLDLWLSQDRFWLGALLVLVHFIVPSNFNPIIHSEIKGGG- 755 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + GG+ GL G +GP+L+ ++ V+++ ++ AI+++ Sbjct: 756 --HPYLTGLSIAGGMYLFGLEGALLGPLLLCVMVVLFEVTMSAIRDSP 801 >gi|327182581|gb|AEA31028.1| permease [Lactobacillus amylovorus GRL 1118] Length = 344 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 109/336 (32%), Gaps = 27/336 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT-VSVM 71 R ++ +I+ LY ++ +L I + + + T + V+ T + ++ Sbjct: 16 RVVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIRLVQRYIPKMPTGIIVVVTYLIIL 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + M+++ ++V V+ + + T ++S + Sbjct: 76 ALLYFVITVYLPMLMVQISKMVKSVMAFYESD-----------ESLRLMSYVTHYISKGE 124 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ---- 187 ++ FA ++ +I FF+ + + + Sbjct: 125 LIEQAKHAM----------TFAFHTATNIGTLTIATFMSLILSFFYTIELKKMREFSSLF 174 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S + +IAI + + +P VALG++ Sbjct: 175 VKSGYLKWLFEDICYFGKKFTNTFGVVLEAQFLIAICNTALTMIGLAIMRMPQIVALGLM 234 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I++++P G IS +SI G I +F+ I + L P + + Sbjct: 235 VLILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKFMASKTE 294 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G GL +G + + Sbjct: 295 LPIFYTFLVLLVAEHFWGSWGLIVGVPIFTFFLDVL 330 >gi|326335034|ref|ZP_08201234.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692839|gb|EGD34778.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 361 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 128/343 (37%), Gaps = 22/343 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++ + +Y L+ V+ A ++ PI K + +T+ + + +MC FI Sbjct: 23 VFLLCLGIYKLQNVIIYVILASVLALIGRPIIQFLKKKLKFKNTWATITSIGLIMCFFIG 82 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + K L S + + +L +I + ++L + + P+ L Sbjct: 83 LMSLFIPMLITQGKNLAS--IDFQALNDNILLFLDNILLSLGFTKLESNITNIPELLN-- 138 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + F I + + + + FFF +DG +IS SL + Sbjct: 139 ---------MQDVSSVVNGFIEIISNLGMGLFSVFFIAFFFMKDGTAISNSFLSLADPKR 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 KK + ++ F+G+ + ++L + GV V + + A++ +IP Sbjct: 190 LPKIKKTLEEIKNLLSRYFVGLFLQLTVIFVLLTIVLLIFGVGDAVIIAFLCALLNLIPY 249 Query: 257 GAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKL 307 PI V L I I T L G + ++D +P + +K Sbjct: 250 LGPIIGAVVISVLTISNFMDADVQSVILPKTIYVLIGFLITQLIDNVFSQPIIFSNSVKS 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F + G++G+ + ++ VI K K Sbjct: 310 NPLEIFLITLISGTLFGIVGMVVAIPAYTVLKVILKAVFPNNK 352 >gi|218439950|ref|YP_002378279.1| hypothetical protein PCC7424_3009 [Cyanothece sp. PCC 7424] gi|218172678|gb|ACK71411.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 382 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 109/339 (32%), Gaps = 15/339 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 RW+ I ++SLY L + A++ + + ++ + Sbjct: 5 RWLGFVIFVISLYILWQIQQLLLLIFMAIVFATAFNRLIRWLEYH-QIKRSYAITLTLGG 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L + + + ++L+ + W+ G + + Sbjct: 64 SLIIITLFFLLIVPPFIEQFQKLLELLPQI---------WVQIRRGLIALRDANLDLFPQ 114 Query: 130 PQSLKILSETFLKTNGIDF-IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + L+ D + L ++F+I+ + Q Sbjct: 115 PPTTLAELIKQLQPVFEDTSFWKRFFAIFSNSFAAILQLLFIIVLTLMMLIEPRPYRQGF 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +I + S F G+ I + G++ G + V + ++ Sbjct: 175 LRLFPSFYRRRADEIFEKTEIALGSWFTGIVISSTFIGILSGVGLLIFQVNLALFHALMA 234 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ IP P I + + + + + I I L P ++ + L Sbjct: 235 GLLNFIPNIGPTLSVIFPIMIALLDAPWKIGAVLILYFIIQNIESYWLTPTVMAKQVSLL 294 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T + + G+LGLF+ + + ++A W E ++ Sbjct: 295 PAVTLMAQLFFAKVFGILGLFLA-LPLTVVAKTWIEEVL 332 >gi|119946920|ref|YP_944600.1| hypothetical protein Ping_3314 [Psychromonas ingrahamii 37] gi|119865524|gb|ABM05001.1| integral inner membrane protein UPF0118 [Psychromonas ingrahamii 37] Length = 353 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 117/338 (34%), Gaps = 22/338 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + I L + P L AL + P +++ +A+ + Sbjct: 9 RSAIFFSAIVISLAGVKVAAPIVVPFLLALFVAIICNPAVDFLSARRIPR--GIAIACVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + +E + ++ ++ + + +S Sbjct: 67 FFIFAIFFGFGGVIGAAVNGFREAI---------PTYEAQFAVELQWFIAKMSEYNIVIS 117 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + F+S G ++ +++ + F +G +++L Sbjct: 118 MTAVREYFDPAKIMTLVTSTLSSFSSVLG--------NVFLLLLTVVFMLSEGGGFAKKL 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +K K + TI+++ GL++G A WL GV +V ++ Sbjct: 170 HIAFDD--SVKTEKRLDHFLKSVNKYMAIKTIMSLMTGLMIGFALWLMGVDFYVLWALLA 227 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP G+ I+ I ++ + A + ++ + P +G + L Sbjct: 228 FLLNYIPNIGSIIAAVPAVILTFLQLGMGYAAAVIALFVGVNTLMGNVIEPRFMGRSLGL 287 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L F L+ +G++G+ + L + + + S Sbjct: 288 STLVVFLSLIFWGWLLGMVGMLLSVPLTMIFKIALENS 325 >gi|308235343|ref|ZP_07666080.1| hypothetical protein GvagA14_03796 [Gardnerella vaginalis ATCC 14018] Length = 530 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 113/350 (32%), Gaps = 23/350 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALI----IGFTSWPIYSSFISKKEE 57 R + +M +I + + ++F G A ++ ++ I P+ I Sbjct: 34 RPPDWLSRALMYAVIAAFVAIFVWFAWGNIAFIVFDVVVSIFIALAIEPLVVRLIKH-GW 92 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S F + L LF ++ + LV L Q + + L D+ Sbjct: 93 SRAFAS--------------LASLFGLLVIVILLLVLFGNLFVQQAVSMVLGLPDLYNQF 138 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFI--PRFASRFGMIFLDYCLSIIFMIIALF 175 L + P ++ E + A L L ++ +++ + Sbjct: 139 AHFVLNSTGFKMPNIEQLGMEILKHVQTSWVVDFAGQAINTTWGLLAVLLDLLTILMVTY 198 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + G S+ + + L + I +V + I S TI+A Sbjct: 199 YISAAGPSMRRSVCRLLNPKSQRRFLFIWSVVQEQISSFLFSRTILAAINATGTAIFLIF 258 Query: 236 AGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 VP + L + I++ +P G + ++ +A + ++ I I + Sbjct: 259 MNVPYWLPLSLFCGIVSQFVPTIGTYLGGALPILFAWGSNGFGSAIAVLIFVTIYQQIEN 318 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P + + L F ++ G LG F+ + A + I K Sbjct: 319 MVISPKISEKTMDLNPAVAFLSVLIMGAVFGALGAFLALPVTASLQAILK 368 >gi|283787887|ref|YP_003367752.1| hypothetical protein ROD_43431 [Citrobacter rodentium ICC168] gi|282951341|emb|CBG91040.1| putative membrane protein [Citrobacter rodentium ICC168] Length = 349 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 118/321 (36%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + A IA V V Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP---AAIAIVVV 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF L L + E ++ + N+ +L ++ + Sbjct: 71 VMLFA--LTALVGVLAASLNEFLAMLPKFNKELTRKLMYLQEMMPFL------------- 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + I F + S++ +++ + F + + ++ Sbjct: 116 -NLHISPERMLQRMDSEKIMSFTTTLMTELSGAMASVVLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 H + + R + V L + ++ G+++ L + + GV+ + Sbjct: 174 FALHNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIIWLGLELMNIQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G+ IS I L+ ++ + + ++ + P ++G + + Sbjct: 233 LNYVPNIGSVISAVPPMIQALLFNGVYECVLVGALFLVVHMVLGNMVEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 293 LVVFLSLLVWGWLLGPVGMLL 313 >gi|331086216|ref|ZP_08335298.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406375|gb|EGG85889.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 9_1_43BFAA] Length = 373 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 101/304 (33%), Gaps = 4/304 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +F P + +I + P+ + + + I V V+ L + L F F E+ Sbjct: 34 YFMPFVIGWVIAMIANPVVRWLEKRLKIVRKLGSAIIIVMVLGLIVTGLYFGFSKAFTEI 93 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF--LKTNGID 147 K + Q R + G++ + + + + + L T + Sbjct: 94 KIFIDNFPEMYQQFEEDFRQIGREFQGIFHLLPAELQVGWDEMVNNMDQGMADLITGISE 153 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 A F +++I +I+ + F + I + + Sbjct: 154 PTVTAAGNFAKRLPSILIAVIVTVISAYIFIAERDEIIVWSKKIAPSAVQKKMTMVVDNF 213 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 + F I I L+L V + ++ A++ +P G + + Sbjct: 214 KCAVGGYFKAQFKIMIVVALILSLGLAFLKVKYVLLCAILIALLDFLPFFGTGTAMIPWA 273 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 ++ + G+ A L + A +V + ++P LV + L L T L G + + Sbjct: 274 VFEFLTGDYKLAIGLIILYATTQ-LVRQLIQPKLVADSMGLTPLVTLVLLYVGYKMGSVF 332 Query: 327 GLFI 330 G+ + Sbjct: 333 GMIL 336 >gi|312904108|ref|ZP_07763276.1| hypothetical protein HMPREF9512_01862 [Enterococcus faecalis TX0635] gi|310632584|gb|EFQ15867.1| hypothetical protein HMPREF9512_01862 [Enterococcus faecalis TX0635] Length = 290 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 8/205 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG I R+ G + L + +S I FFF + ++ + F +++ Sbjct: 74 QNGASMILRYIQDIGAVGLSFVMSFILS----FFFMIEKKQMADFSKLFLKSDFDWFFQD 129 Query: 203 ISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I K + + IA+ ++ A + G +L ++ I++++P Sbjct: 130 IYYFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLPSLAIMIFILSLVPVAGV 189 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I +S +G + + + I L P + +LP TF L+ Sbjct: 190 IISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPKFMSSKTELPIFYTFVILLV 249 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWK 343 R G+ GL +G + + K Sbjct: 250 SERLFGVWGLIVGIPVFTFFLDVLK 274 >gi|296135512|ref|YP_003642754.1| protein of unknown function UPF0118 [Thiomonas intermedia K12] gi|295795634|gb|ADG30424.1| protein of unknown function UPF0118 [Thiomonas intermedia K12] Length = 352 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 14/335 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T ++ +I + L ++ L P L L + + P+ ++ + Sbjct: 1 MLLTPPVKNALIWLVIGLVALWLIWLLGSILMPFLVGLTLAYVLHPLVERLKRRRIPRAL 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV V++ LF L + +V+++V + P+ G + Sbjct: 61 GAAVAIIVAI---------GLFVGLFLLLVPVVTEIVPLIREKFPLLLQTIINWGTPLLA 111 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S++ +L +G D+ + R AS G+ L ++ + + F+ Sbjct: 112 RFDIHVKFDTASVQQTLSKYLSAHGEDWAGLLLRSASTGGISLLVLLGNLTLIPVVAFYL 171 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D ++ L ++ G ++ + +AG Sbjct: 172 LLDWTPTLVRIRGLIPPKHRDAVLSFFHDCDVILGQYLRGQLLVMLILAFYYSLGLVIAG 231 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKT 295 + +G+ T + +P +++ + + + + I I Sbjct: 232 FNLALPVGIFTGLAVFVPYVGFGLGLLLALLAGALQFLSWYGVIAVAIVYGIGQLIESMY 291 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + P VG I L L F L+ G G+ + Sbjct: 292 ITPKFVGESIGLHPLLVIFILLAFGTLFGFWGILL 326 >gi|187934482|ref|YP_001886501.1| hypothetical protein CLL_A2312 [Clostridium botulinum B str. Eklund 17B] gi|187722635|gb|ACD23856.1| putative membrane protein [Clostridium botulinum B str. Eklund 17B] Length = 394 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 105/303 (34%), Gaps = 19/303 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVMCLFIVPLL 79 P+L A++I + +PI S + + + + + ++++ + + L Sbjct: 51 IKPLLIAILITYILFPITRSIENFLKNNKIYKIKNNGTSRALSIIFSYLAIIGIILGLLC 110 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ ++ + +S + + LS+ + L L + + Sbjct: 111 GIYFMIGGQLSKNISISNIVEYISTYLNTHSLSNSSISLALENLNLPFLDAMEDHIVEVV 170 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-- 196 F++ + I + AS F + + +I + +D D L +F Sbjct: 171 NFIQNYITNNIGKMAS-FAVSIGSGVATFFIALIISIYLLKDHEYFINLWDKLYYLIFRN 229 Query: 197 ---PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + +V G + A G++ A + G+ +G+I + + Sbjct: 230 SKIGKKINYVFSTIHEVFGRFIRGQLLEAFFVGVLSAIALSIVGIDYAFVIGIIVGLSNL 289 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPT 312 IP PI T ++ + + + I + +D L P +VG + L + T Sbjct: 290 IPYVGPIVGTILAAIMGLLSGTPIKIVYAIIAMIIVQQIDNNLLAPKIVGNSVGLHAVFT 349 Query: 313 FFG 315 Sbjct: 350 MLA 352 >gi|307692538|ref|ZP_07634775.1| hypothetical protein RbacD_06105 [Ruminococcaceae bacterium D16] Length = 369 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 103/310 (33%), Gaps = 11/310 (3%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 K+ + + V+++ + + F+ + ++ + V + + ++ Sbjct: 61 ERFKKLGRPLAVLTSYVAMIAIIVALFSFVLPQVVDSIQLFAASVSGYMVNLQAIINKIA 120 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + + S L+ + L + L ++++ I Sbjct: 121 E-----YLDLSSLDLSSLSSYLRSFLDGVLSSVTTA--ASQVMVVTSSILSMFVTLVLAI 173 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + Q L P + R+ + + G I A G Sbjct: 174 VFSIYMLAGREKLLDQGRRLLRAYLPDRHVTWVSDVIRLTAETFTNFVSGQAIEACILGG 233 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + +GVI + A+IP +S +LL+ + A ++ +I Sbjct: 234 LCALGTFFIQPDYAALIGVIVGVSALIPVAGAYIGAILSAFLLVMVSPVRAIIFLIFLSI 293 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 I + P +VG I LP + + G GLLG+ + + +++ + K+ ++ Sbjct: 294 LQQIEGNVIYPRVVGTSIGLPGIWVLTAVTVGGGLFGLLGVLLSVPVASVLYALLKQDVV 353 Query: 348 AIKENKEKIS 357 KE + Sbjct: 354 RRLRKKEPVK 363 >gi|237744068|ref|ZP_04574549.1| permease [Fusobacterium sp. 7_1] gi|229431297|gb|EEO41509.1| permease [Fusobacterium sp. 7_1] Length = 357 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 128/331 (38%), Gaps = 8/331 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 KG+F ++ A+ I PI K + + ++ V V+ + ++ L + + Sbjct: 31 KGYFMTLIMAIFIAILLEPIKKYLKKKSKINDVLAISLSIVFVVLIVVIISLIVIPEIIS 90 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ + + + +++ + TK L + I + T +N + Sbjct: 91 SLKVLNDIYPAISEKVLTIGKDVTNYLAEKNIYTVDTKELDDYFTKFISNNT---SNIKE 147 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKI 203 F+ F L + ++I F D ++ + L++L +F Y Sbjct: 148 FVLAFIGGLVNWTLGFT-NLIVAFTLAFLILLDKKNLMKTLENLIIIIFGVKNTPYVMNK 206 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + S G I++ GL + + G P ++ + MIP I Sbjct: 207 LKLSKDIFISYISGKIIVSFIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSILGG 266 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+ +L++ L + I + + P ++G + L ++ Sbjct: 267 IVAFFLILLVAPIKTLILLIAIVIAQLVDGFIVGPKIIGDKVGLSTFWVMVSMIIFGNLF 326 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL+G+F+G ++++I + + + + A + ++ Sbjct: 327 GLVGMFLGTPILSIIRLFYIDLLKAKQGGEQ 357 >gi|237739667|ref|ZP_04570148.1| permease [Fusobacterium sp. 2_1_31] gi|229423275|gb|EEO38322.1| permease [Fusobacterium sp. 2_1_31] Length = 358 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 129/331 (38%), Gaps = 8/331 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+F ++ A+ I PI K + + ++ V V+ + I+ L + + Sbjct: 32 GYFMTLIMAIFIAILLEPIEKYLKKKSKINDVLAISLSIVFVVLIVIIMSLIVIPEIISS 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K L ++ + + + +++ + T+ L+ + I + T +N +F Sbjct: 92 LKVLNDMYPAISEKVLTIGKDVTNYLAEKNIYTVNTEELNDSITNFISNNT---SNIKEF 148 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKIS 204 + F L + ++I F D ++ + L++L + +F Y Sbjct: 149 VFAFVGGLVNWTLGFT-NLIIAFTLAFLILLDKKNLMKTLENLIKIIFGVKNTPYVMNKL 207 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 ++ + S G I++ GL + + G P ++ + MIP I Sbjct: 208 KLSKDIFISYISGKIIVSSIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIFGGI 267 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+ +L++ L + I + + P ++G + L ++ G Sbjct: 268 VAFFLILLVAPIKTLILLIAIIISQLVDGFIVGPKIIGNKVGLSTFWVMVSMIIFGNLFG 327 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++G+F+G ++++I + + + + ++ ++ Sbjct: 328 IVGMFLGTPILSIIKLFYVDLLKRAEQGGKE 358 >gi|77164880|ref|YP_343405.1| hypothetical protein Noc_1381 [Nitrosococcus oceani ATCC 19707] gi|254434105|ref|ZP_05047613.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76883194|gb|ABA57875.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207090438|gb|EDZ67709.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 384 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 113/325 (34%), Gaps = 19/325 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P++ ++++ ++ PI S+ K A + ++ LFI L + Y + Sbjct: 44 LVPLVFSILVSYSLDPIVSALERLKVPR-WLGATL----LVMLFIGLLGYGSYTLRDQAM 98 Query: 91 ELVSKVVLANQ---HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 L+ K+ A Q H + V S E K +S + + Sbjct: 99 VLLDKIPQAVQTLRHSMQVKPADSREGVIKKVQEAAEKIQEATKSADDNATSSKPGVMKV 158 Query: 148 FIPRFASRFGM-------IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I + G L + + +++ + F G + ++L + Sbjct: 159 EIVEPGLKLGEYVWWGSLGVLAFLAQLATVVMLVLLFLVSGDTYKRKLVKITGPTLSEKK 218 Query: 201 K--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 +I + IR + I + GL A+ G+ G+I + + +P G Sbjct: 219 VTVQILDDINMQIRRHLFVLVISGVFVGLATWGAFLWIGLEQAALWGLIAGVASTVPYLG 278 Query: 258 APISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + F A +I L++ G I + + I L P+L + + F GL Sbjct: 279 PAVVFAATTIVALVQFGTITMGLGVGAASLLITGIQGNWLTPWLTSRTSSINAVVVFIGL 338 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 + G +GL + ++ +I V Sbjct: 339 LFWGWLWGPIGLIVATPILIIIKVC 363 >gi|311114317|ref|YP_003985538.1| hypothetical protein HMPREF0421_20433 [Gardnerella vaginalis ATCC 14019] gi|310945811|gb|ADP38515.1| hypothetical integral membrane protein in UPFO118 [Gardnerella vaginalis ATCC 14019] Length = 533 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 113/350 (32%), Gaps = 23/350 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALI----IGFTSWPIYSSFISKKEE 57 R + +M +I + + ++F G A ++ ++ I P+ I Sbjct: 37 RPPDWLSRALMYAVIAAFVAIFVWFAWGNIAFIVFDVVVSIFIALAIEPLVVRLIKH-GW 95 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S F + L LF ++ + LV L Q + + L D+ Sbjct: 96 SRAFAS--------------LASLFGLLVIVILLLVLFGNLFVQQAVSMVLGLPDLYNQF 141 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFI--PRFASRFGMIFLDYCLSIIFMIIALF 175 L + P ++ E + A L L ++ +++ + Sbjct: 142 AHFVLNSTGFKMPNIEQLGMEILKHVQTSWVVDFAGQAINTTWGLLAVLLDLLTILMVTY 201 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + G S+ + + L + I +V + I S TI+A Sbjct: 202 YISAAGPSMRRSVCRLLNPKSQRRFLFIWSVVQEQISSFLFSRTILAAINATGTAIFLIF 261 Query: 236 AGVPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 VP + L + I++ +P G + ++ +A + ++ I I + Sbjct: 262 MNVPYWLPLSLFCGIVSQFVPTIGTYLGGALPILFAWGSNGFGSAIAVLIFVTIYQQIEN 321 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P + + L F ++ G LG F+ + A + I K Sbjct: 322 MVISPKISEKTMDLNPAVAFLSVLIMGAVFGALGAFLALPVTASLQAILK 371 >gi|296112802|ref|YP_003626740.1| hypothetical protein MCR_0576 [Moraxella catarrhalis RH4] gi|295920496|gb|ADG60847.1| conserved hypothetical protein [Moraxella catarrhalis RH4] Length = 369 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IAT 67 + + + + L +L+ +K P ++A I+ + P+ S V I+ Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLALIMPRILAVSVVYISC 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VM I+ L+ + + M + E + ++ W++ Sbjct: 71 FVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGR--AWIARYTNSELLP---LDID 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N + + + G+ + I+ + I F+F Sbjct: 126 LISNTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWNQRLYT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 186 WKLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGIT 245 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--DKTLRPFLVGGP 304 I + +P G I A I L + + ++GA + V L+P L+G Sbjct: 246 AGIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDK 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L L F ++ G G +G+ I + A+I V++ Sbjct: 306 IGLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLF 343 >gi|289423551|ref|ZP_06425352.1| permease [Peptostreptococcus anaerobius 653-L] gi|289156053|gb|EFD04717.1| permease [Peptostreptococcus anaerobius 653-L] Length = 387 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 101/287 (35%), Gaps = 2/287 (0%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 L+++ T +C+ + LF+ + L S + + + + + + S Sbjct: 88 LSLLMTYFTVCILV--YLFIEFILPEVAASLSSIITDFPRIVNKLYLYTDSLISSIEISG 145 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ TN + ++ + L II + L Sbjct: 146 PAKEFVTAKIEEIGKQLMEFATNLMPYLANTLLMVLKSIWNLVLGIIISVYVLADKEGFY 205 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ Y ++ + + +G I + G + ++ +P Sbjct: 206 AMCKKFIRAVFSISAGDYILYVTDLSNDMFGKFIVGKIIDSTIIGAIAFIVLYIVKMPYL 265 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + I + +IP P SI L++ + A L + I + + P ++ Sbjct: 266 ILITFIIGVTNIIPFFGPFIGAVPSIILVLFVSPIKALWLTIIIFIIQQLDGNVIGPKIL 325 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 GG + + F L+ + GL+G+ +G L A+I + E+I Sbjct: 326 GGSLGISSFWILFSLLLAGKFFGLIGMVLGVPLFAVIHTLAGETIND 372 >gi|237800255|ref|ZP_04588716.1| hypothetical protein POR16_15601 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023112|gb|EGI03169.1| hypothetical protein POR16_15601 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 335 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 109/341 (31%), Gaps = 16/341 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++F+ + L G APVL+ L++ F + S+ + + ++ T+ Sbjct: 1 EAVVLAVLLFLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSALERLRMPEMAAVGLVFTL 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 F+ + + + P L+ + HL Sbjct: 61 -----------FIGVLLVFLLVLVPLLWHQMITLFNEAPGMLAKWQSVLLLLPERYPHLV 109 Query: 129 HPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + E G F+ + ++ + ++ + I +FFF +D I + Sbjct: 110 SDEQVLLAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMIGR 169 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 A +++ + + I + G I G V A+ G+ L + Sbjct: 170 WARGYLPR-ERALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYAALLAM 228 Query: 247 ITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + I + G ++ I L G L + I + L P L Sbjct: 229 LVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFSEA 288 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 289 VNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 329 >gi|87301855|ref|ZP_01084689.1| hypothetical protein WH5701_00980 [Synechococcus sp. WH 5701] gi|87283423|gb|EAQ75378.1| hypothetical protein WH5701_00980 [Synechococcus sp. WH 5701] Length = 379 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 107/295 (36%), Gaps = 17/295 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A L+A +I F + LA++ + ++ L +V L++ + Sbjct: 34 LAPFPALFLTAALIAFLLDLPSRWLTGRGLPRPLALALVLGLGLLVLVLV-ALWIIPLLV 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL--KTN 144 ++ +L++ +P W + + ++ W P LS L T Sbjct: 93 EQLADLLT----------ALPGWFVEAETLLNQAQAWAVEHGLPADFGDLSSALLTRSTQ 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L ++ + +I+ F G SIS+ L L ++ + + Sbjct: 143 YASQLSQKLLGLLGATLTLTINSVIVIVLAIFLLLGGESISRGLARW---LPASWREMVL 199 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 V + R F G I+A+ + L G+P V V +IP + + Sbjct: 200 GTVNRTFRGYFGGQVILALILSAAQIVVFTLLGIPYGVLFAVAIGFTTLIPYASAFTIVL 259 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 VS+ L ++ + + +VD+ ++P L+G + L L G Sbjct: 260 VSLLLALE-DPTTGLEVLAVAIAVGQVVDQVIQPRLMGKIVGLQPAWLLLSLPVG 313 >gi|297588299|ref|ZP_06946942.1| ABC superfamily ATP binding cassette transporter permease subunit [Finegoldia magna ATCC 53516] gi|297573672|gb|EFH92393.1| ABC superfamily ATP binding cassette transporter permease subunit [Finegoldia magna ATCC 53516] Length = 395 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 L I+ + + F+ D + + + I + K Sbjct: 191 SQTGNVTGNIFSNLLRIVLVPVVSFYMLLDKEKCIDFIMGFIPNENKDKFLSICSDMDKA 250 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 G I+AI G++ A + V + +G++T + +IP P + L Sbjct: 251 YSEFIRGRLIMAIFVGVLTAIALIIMKVDFAIIIGILTMVGDIIPYIGPFIAVTPAFILA 310 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A + + ++ + L P L+G I + L L+ Sbjct: 311 FLDSPLKAIVVVVVFVSIQWVENNILAPKLLGSKIGINPLLVIVSLII 358 >gi|330959281|gb|EGH59541.1| hypothetical protein PMA4326_12067 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 356 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 110/349 (31%), Gaps = 16/349 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++ + + L G APVL+ L++ F + S K Sbjct: 9 MQRYFSDEEAVVLAVLLVLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSLLERLKMPEMA 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ T+ F+ + + + +P + + Sbjct: 69 AVGLVFTL-----------FIGVLLVFLLVLVPLLWHQMITLFNELPGMFAKWQSVLLLL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 HL + + + E G F+ + ++ + ++ + I +FFF Sbjct: 118 PERYPHLVSDEQVLLAIEVARGEVGKVGQLALTFSLSSLPVLVNLMIYLVLVPILVFFFL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D I + A +++ + + I + G I G V A+ G+ Sbjct: 178 KDRHMIGRWARGYLPR-ERALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGL 236 Query: 239 PSHVALGVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 L ++ I + G ++ I L G L + I + L Sbjct: 237 NYAALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGGQFIYLMIAHGIIQALDGNVL 296 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L + L + ++ G G+F L L + Sbjct: 297 VPLLFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|153209009|ref|ZP_01947203.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177'] gi|212219116|ref|YP_002305903.1| riboflavin transporter [Coxiella burnetii CbuK_Q154] gi|120575546|gb|EAX32170.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177'] gi|212013378|gb|ACJ20758.1| riboflavin transporter [Coxiella burnetii CbuK_Q154] Length = 363 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 121/342 (35%), Gaps = 34/342 (9%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + PV+ ++++ + + + AV +++LF+ G Sbjct: 41 FFGKYLLPVVISVVLAYLFASPVRWLERWRFPH--WAAVT------------IVYLFFLG 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++ Q + + + P + + W H ++ N Sbjct: 87 IFLLALFGLLPLMWKQ----LASMVHEFPKAITKGQAWMTEYMHRYPKLFPTDPI--ANL 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMII-----------ALFFFYRDGFSISQQLDSLGEH 194 ++ + ++R G L + L+ I II +FFF +DG SIS L Sbjct: 141 AGYLHQQSARIGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGGSISNWLSRFLPE 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + I + G I I +V A+ L G+ LGV+ + ++ Sbjct: 201 RQGL-IRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFVLLGLQYAFLLGVLLGLSVIV 259 Query: 255 P-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P GA + ++I L++ G + L + AI + + L P L + L + Sbjct: 260 PYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLLFSEAMDLHPIVI 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+F L L+ + A E Sbjct: 320 ILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNE 361 >gi|283458643|ref|YP_003363278.1| putative permease [Rothia mucilaginosa DY-18] gi|283134693|dbj|BAI65458.1| predicted permease [Rothia mucilaginosa DY-18] Length = 429 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 115/347 (33%), Gaps = 48/347 (13%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ A+++ P + KK + A IA + ++ + + G ++ Sbjct: 59 VIAMMVAMLLAALLSP-TVMLLRKKGVRAGGAAAIAEIGMILVLAG---IISLTGQQILR 114 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 VS A Q + WL D+ G + ++ + L +S TN + Sbjct: 115 GFVSMADKAMQGYQQLIGWLKDL-GYEFGADQLNQLLEQMESAA--------TNNPSSVL 165 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 SR G D ++ + L FF +G I + L R K Sbjct: 166 NGVSRVGSTAADVATGVLLTLFTLLFFLMEGERIWLFVVGLFPKDAREAVNGAGRAGWKS 225 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI---------- 260 + + ++A + + +G + GVP + LGV+ + + IP + Sbjct: 226 LGAYVRVQILVAAIDAIGIGLGAAILGVPLAIPLGVLVFLGSFIPVIGALFSGAVAVLLA 285 Query: 261 --------SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + + I LL++ + L+P ++G + L L Sbjct: 286 LVALGPVQALIMLGIVLLVQQ-----------------VESHILQPLIMGKAVSLHPLAV 328 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F + GG G +G +A++ + + E+ + Sbjct: 329 IFSVAGGSMIFGAVGALFAVPTLAVVNSVVRYLADRGWEHDPNLRDE 375 >gi|300854400|ref|YP_003779384.1| putative permease [Clostridium ljungdahlii DSM 13528] gi|300434515|gb|ADK14282.1| predicted permease [Clostridium ljungdahlii DSM 13528] Length = 342 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 109/335 (32%), Gaps = 13/335 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + +++ L+ + + +I +T PI ++ + A+I Sbjct: 15 TIVIFAAAALLVAKSSVLREMLYLIFISFLIAYTLKPIEIKMVNA-GVNKKVSAIIIIGI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L + L E +L + L I G L Sbjct: 74 LILLVVSTFALLIPSLFKESLKLNATAANIQMLIDKFYAKLKLIQGNRTIHLLVNNLNRR 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S I F M + L ++ + I ++F D I++ L Sbjct: 134 IDSEIAS------------IFVKIFDFLMNMGENILYLVVIPIITYYFLADDKCINESLL 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S KKI K++ +++ G+ V + L ++ A Sbjct: 182 SAFPVNSRKPIKKICCHADKILGRYIASQIMLSALVGIATFFILIFLKVEFPIILSILNA 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP PI +I + + + A +W + I L P + G I + Sbjct: 242 FFNIIPYFGPIFGALPAIVIALTKSPETALWTAVWLYLLQQIEGNILSPKVTGDSIDMHP 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L+ G + G +G+ + L+ VI+++ Sbjct: 302 LIVILLLIVGGKISGFIGMVLAVPFGVLVKVIYED 336 >gi|297626024|ref|YP_003687787.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921789|emb|CBL56349.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 397 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 103/286 (36%), Gaps = 21/286 (7%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 FAP+ AL + T++P+++ + K + L+ + T V+ + ++ ++ + + E Sbjct: 75 FAPMFLALNLMVTAYPLHTWLVRK--GCPSPLSAVTTALVVFVVLLAMVAGLVWSVNETV 132 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L +P++ + G + + + K+ + I Sbjct: 133 TL-------------LPQYADEFTG---LFNWFIDRAAQLGFDQASLMQAFKSIDPNSIF 176 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 AS + + ++ L F D + ++ G + + Sbjct: 177 SAASSVLNGASGFVAMLAILVTTLVFMAMDTSGFAARIRIAG--ATHSRMVTGLVSFSRG 234 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 IR ++ ++ + ++ A + GVP + G+++ + IP G + ++ Sbjct: 235 IRRYWVVTSVFGLIVAVLDVIAVAIIGVPLPIVWGLLSFLTNYIPNIGFVVGLIPPALVA 294 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 L+ A + + + F+V ++P G + + +F Sbjct: 295 LVALGWKQALVVVVLYCVLNFVVQSIIQPRFTGESVGVTPTISFIS 340 >gi|300775369|ref|ZP_07085231.1| permease [Chryseobacterium gleum ATCC 35910] gi|300506109|gb|EFK37245.1| permease [Chryseobacterium gleum ATCC 35910] Length = 370 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 116/318 (36%), Gaps = 18/318 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + +++ + L FF L A+ P + K + ++T++ + + Sbjct: 20 IGLGYLLALGQSILAPFFLAFLMAM----LFLPAATFMERKLRFPRS----MSTMTSVFI 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ L + Y+ ++ + + + V L W S+ + + Sbjct: 72 MLMILCGIIYFFTNQLSDFSKDLPHLQEQFTTVFNSLQH-----WVSKTFNVKVDEQVDY 126 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L ++ + F F +F I L + ++ + ++ Sbjct: 127 INQGLNKLLSSSGVILGFTFGIFSTGFGFIIFFTLFFIFILNY----RRLLNNFIVTVFN 182 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A ++ + + + G+ + I ++ + + GV + LGV+T ++ + Sbjct: 183 ERHKASVQEAVNEIRIMTKKYIFGLFLQVIIVSVLTSTLLTVLGVKYAILLGVLTGLLNV 242 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPT 312 IP +S ++ + + G I + VD + PF+VG +K+ L + Sbjct: 243 IPYLGIFISLLISCFIAFATSTPSTCIYVALGYIAIHAVDGNIVLPFVVGSKVKINALFS 302 Query: 313 FFGLVGGVRTMGLLGLFI 330 F G++ G G+ G+F+ Sbjct: 303 FIGILLGEHLWGIAGMFL 320 >gi|170760921|ref|YP_001786531.1| putative transporter [Clostridium botulinum A3 str. Loch Maree] gi|169407910|gb|ACA56321.1| putative transporter [Clostridium botulinum A3 str. Loch Maree] Length = 367 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 98/297 (32%), Gaps = 2/297 (0%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ F + + +I V + + ++ L + + ++ + Sbjct: 59 ILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLSMIVPKVFQSIMDIFQNIPYYTNK 118 Query: 103 GIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 G V L + A + + L +F + G++ I F + Sbjct: 119 GYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIASF-TSVGLNTILSQTISFTTFMV 177 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +I I L + ++ + + + + + R V +I+ + Sbjct: 178 NLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALD 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 ++ GL+ + P + + +I + MIP P ++ + + A + Sbjct: 238 SLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWV 297 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + L P LVG + L G+ G G+ G+ + MA+I Sbjct: 298 LIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVI 354 >gi|18311630|ref|NP_563564.1| sporulation integral membrane protein YtvI [Clostridium perfringens str. 13] gi|169343458|ref|ZP_02864458.1| sporulation integral membrane protein YtvI [Clostridium perfringens C str. JGS1495] gi|18146314|dbj|BAB82354.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|169298410|gb|EDS80499.1| sporulation integral membrane protein YtvI [Clostridium perfringens C str. JGS1495] Length = 354 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 125/335 (37%), Gaps = 9/335 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ ++ + I + I++ ++ +F + P L A I I K + + Sbjct: 1 MKNLIIKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNV 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMW 118 + I+T + I+ E L + + N + + + + Sbjct: 61 GLASFISTFIFFLIIIILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIE 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALF 175 + + L+ ++ I S + + F + ++ + +IF +++ + Sbjct: 121 VNFIDNAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVLSTY 180 Query: 176 FFYRDGFSI--SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F ++ +I S+ L + + I + K+ + + ++ + Sbjct: 181 FLSKELNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGF 240 Query: 234 WLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + + L VI A++ ++P G P+ + + GNIF+A LF+ I +F++ Sbjct: 241 SFLNIKYALLLSVIAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILY-IFIFLL 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + L P L+ + + L + G+ GLLG Sbjct: 300 RQFLEPKLMASTLGIHPLLILICIFIGLELNGLLG 334 >gi|312143672|ref|YP_003995118.1| sporulation integral membrane protein YtvI [Halanaerobium sp. 'sapolanicus'] gi|311904323|gb|ADQ14764.1| sporulation integral membrane protein YtvI [Halanaerobium sp. 'sapolanicus'] Length = 353 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 111/327 (33%), Gaps = 8/327 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +F P + A +I PI F +I + V+ +F + + + Sbjct: 30 YFTPFIIAAVIASLINPIVDILDKNIPVHRGFSVLIVLLLVVVIFAS-FIIIGGAQIYLE 88 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + + + + +WL++ + A + Q + L D I Sbjct: 89 LNRLLRNLPDFRTIDTQIQWLAEQNQQLEALIESWEISEAVQESIRANIQLLYNGIRDAI 148 Query: 150 PRFASRFGMIFLDYCLSIIFMII----ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + L S+ ++ A FF RD I L +L + Sbjct: 149 ISVINNILE-MLTRLPSVFMILFISFIATFFISRDRDDIKHFLVNLFPEDVKPKIANVFI 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 + + I+ G + G L G V +G+ AI+ +IP G + F Sbjct: 208 QLNISAVGYIRALLILISISGTIAGVGVHLMGFEYAVIIGLTAAILDLIPIIGPALLFYP 267 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I +I GN A LFL V ++G + + L T L G R +G Sbjct: 268 WIIVSIIYGNFTQAFSLFLLHLFLAG-VRSASEGKIMGENLGVHPLATMIALFAGFRILG 326 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 +G +GP + +I + ++ I++ Sbjct: 327 AIGFVVGPTFLVIIKAVTDSELVNIRD 353 >gi|238762175|ref|ZP_04623147.1| AI-2 transport protein tqsA [Yersinia kristensenii ATCC 33638] gi|238699522|gb|EEP92267.1| AI-2 transport protein tqsA [Yersinia kristensenii ATCC 33638] Length = 353 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 22/315 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +I+ + P L A+ + P+ + K + T ++ ++ L + Sbjct: 20 LVVIMAGIKAASPIVVPFLLAIFLAIVLNPL-VKLLEKIKIPRTLAIILLVTIIVLLMAL 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L N+ +P++ + M + + + S+ + Sbjct: 79 LFSRLGSSL--------------NEFARSLPQYRGMMLEKMRELQEFAMRFNIEFSVDDI 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + ++F+ R S L ++ ++ LF R + + D+ Sbjct: 125 MNHVDPSMAMNFVTRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKMQLMFDN------ 178 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 P I R + + TII+I G+V+ GV G++ ++ IP Sbjct: 179 PEQGNAILRRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPN 238 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G+ ++ + L+ +A + + I + P ++G + L L F Sbjct: 239 IGSVLAAIPPIVQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGLSTLVVFLS 298 Query: 316 LVGGVRTMGLLGLFI 330 L+ +G +G+ + Sbjct: 299 LIFWGWLLGPIGMLL 313 >gi|194467528|ref|ZP_03073515.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] gi|194454564|gb|EDX43461.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] Length = 347 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 9/221 (4%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +GI + G I + + +S+I FF+ + +++ S + F +++ I Sbjct: 131 HGITIAVSTLTSIGAITISFVMSLILS----FFYTLELKQMNEFSHSFLDSDFGWFFQDI 186 Query: 204 S---RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + IAI ++ +P AL +I I +++P G Sbjct: 187 DYFGKKFVNTFGVVLEAQFFIAICNTVITTICLLFMRMPQIFALSLIVFIFSLVPVAGVI 246 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS +++ G + + + + I + L P + LP TF L+ G Sbjct: 247 ISTIPLAMVGYSVGGVRDVVYIIIMIIIIHTLEAYVLNPKFMASRTDLPIFYTFIVLLIG 306 Query: 320 VRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISSN 359 G GL +G P+ L+ V+ + I K K+++S Sbjct: 307 EHLFGTWGLIVGVPIFTFLLDVLGVKPIRGAKRIKKEVSEK 347 >gi|159899320|ref|YP_001545567.1| hypothetical protein Haur_2801 [Herpetosiphon aurantiacus ATCC 23779] gi|159892359|gb|ABX05439.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 402 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 115/347 (33%), Gaps = 13/347 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++V ++ L +L+I P I + S + + Sbjct: 11 ILFTLALVVLMWMFSDAVLLFLVSLVIASAVRPFAQRLIDR-GMSRGAAYGLVYFASFVF 69 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + + E+ G + + + + + W + ++ Sbjct: 70 FGGLFAVISRGLLSEL----------QLAGDQLLNFYTRVTLTWPQGQEWQQTIASELPS 119 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + FG D+ ++ ++ ++ D + SL Sbjct: 120 RQALLDYFAGTDGTAVINSIVGFGSGVFDFLAQLVILLSLSTYWAVDQNRFERLWLSLIS 179 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I R V + + + G+ LG + L G+P L + AI + Sbjct: 180 AKHRQRARTIWRAVELEVGAYIRSEVAQSSLAGISLGIIFELIGLPYPTLLALWIAIAWL 239 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + ++ + + NI A L + + P L G ++ + Sbjct: 240 VPWVGVLLALIPAVAVGLLVNIPVALLAGLSTIAVFAFLQIWVEPRLYGAN-RVSPVLVV 298 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ + G+LG+ I P L A I ++ +E + K +E+++ ++ Sbjct: 299 LILMVMAQAFGILGMLIAPPLAATIQILGRELWFS-KSPEEQLADDY 344 >gi|312891269|ref|ZP_07750788.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311296229|gb|EFQ73379.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 377 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 122/350 (34%), Gaps = 25/350 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG--FFAPVLSALIIGFTSWPIYSSFISKKEES 58 M +T+L + ++++ ++ + + G AP++ + + P+ +K Sbjct: 1 MNKTVLPYYAKLAFVLVSLLCIGYIAIIGKELLAPLVFSFLFAMLLLPMARFLENKCRIP 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A+I+ + + + + +++ + RWL + Sbjct: 61 RGGAAMISVILFTAFIALIIYLVGSQMGTLSEDIPKIKEQFTNITDQLHRWLVN------ 114 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALF 175 I + T + AS G FL L ++F+ I F Sbjct: 115 -------------EFHINVNQQINTVKKEANAAGASVIGSAFLSLSSIVLFLVFIFIYTF 161 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + L ++ + +++ G+ + + +++ + Sbjct: 162 FVLFYRKILIGFLLKAFGTDSEVLVFDVAEQIQYIMKKYISGLFLEMLTVCIIVFGILTI 221 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-K 294 G+ + L +IT I ++P + A+ L + + + + +VD Sbjct: 222 LGIKYALLLALITGIFNLVPYVGIFTAMAIGTTLTLGTSGPAKAIEVAAAIVGVHLVDSN 281 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P +VG ++L L G+V G + G+F+ ++A++ +I+ Sbjct: 282 IIMPRIVGSKVRLNALIVVLGVVVGEMVWDISGMFLSIPVLAIVKIIFDR 331 >gi|238757692|ref|ZP_04618876.1| AI-2 transport protein tqsA [Yersinia aldovae ATCC 35236] gi|238704197|gb|EEP96730.1| AI-2 transport protein tqsA [Yersinia aldovae ATCC 35236] Length = 329 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 105/304 (34%), Gaps = 22/304 (7%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P L A+ + P+ K +A V ++ + I+ + LF Sbjct: 8 SPIVVPFLLAIFLAIVLNPLVKLLERIKIPR-----TLAIVLLVTIIILLMALLFSRLGT 62 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + E V P++ + M + + + S+ L + + ++ Sbjct: 63 SLNEFARSV----------PQYRGMMLEKMRELQEFAMRFNIEFSVDDLMKHVDPSIAMN 112 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F+ R + L ++ ++ LF R + + D+ P I + Sbjct: 113 FVTRLIGHLSGAMANTFLLLMTVVFMLFEVERLPYKVQLMFDN------PEKGNAILKRA 166 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 + + T+I+I G+V+ GV G++ ++ IP G+ ++ Sbjct: 167 LNGVTHYLVIKTVISIVTGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPNIGSVLAAVPPI 226 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I L+ +A + + I + P ++G + L L F L+ +G + Sbjct: 227 IQALLFNGFADAFAVTGGYVLINLIGGNIIDPRMMGRGLGLSTLVVFLSLIFWGWLLGPI 286 Query: 327 GLFI 330 G+ + Sbjct: 287 GMLL 290 >gi|254519193|ref|ZP_05131249.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226912942|gb|EEH98143.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 318 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 109/305 (35%), Gaps = 29/305 (9%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +F P + +I+ + P+Y FI + I + + + + + + +Y + Sbjct: 30 YFQPFIIVVIMILITQPVYKFFI-----KTNLPKSICAILSLLIINIFIFVIIFYFGNTI 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L K N SE+ + L L+T F Sbjct: 85 LSLFYKFYRNN------------------MSEVDAFIKNMKILLNFDLNKMLQTLSGFFS 126 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + ++ D +S I +F D I L +L + + + + + + Sbjct: 127 SNMIMQGAIVTGDSLVSYFLANIIDYFILVDKNKIYDLLKNLFPQEIISNFMEKIKNLKE 186 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 V + + + A ++ + + G+ + + LG + AI+ ++P G I F + IY Sbjct: 187 VFKIEVRLIILSA----FIITLGFKILGIHNSIFLGSLCAILDILPFVGTTIVFMPIIIY 242 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 +I L +E F+ + L + +++ L + GV+ G +G+ Sbjct: 243 NIIMKRYLLVIGLISLYLLERFVRE-ILEAKFLSSKLEIHPLIVIVSIYVGVKMFGFVGI 301 Query: 329 FIGPV 333 GP+ Sbjct: 302 IAGPI 306 >gi|148379130|ref|YP_001253671.1| putative transporter [Clostridium botulinum A str. ATCC 3502] gi|168178564|ref|ZP_02613228.1| putative transporter [Clostridium botulinum NCTC 2916] gi|226948415|ref|YP_002803506.1| putative transporter [Clostridium botulinum A2 str. Kyoto] gi|148288614|emb|CAL82695.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|182670768|gb|EDT82742.1| putative transporter [Clostridium botulinum NCTC 2916] gi|226844553|gb|ACO87219.1| putative transporter [Clostridium botulinum A2 str. Kyoto] gi|322805470|emb|CBZ03034.1| permease [Clostridium botulinum H04402 065] Length = 367 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 98/297 (32%), Gaps = 2/297 (0%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ F + + +I V + + ++ L + + ++ + Sbjct: 59 ILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLSMIVPKVFQSIMDIFQNIPYYTNK 118 Query: 103 GIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 G V L + A + + L +F + G++ I F + Sbjct: 119 GYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIASF-TSVGLNTILSQTISFTTFMV 177 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +I I L + ++ + + + + + R V +I+ + Sbjct: 178 NLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALD 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 ++ GL+ + P + + +I + MIP P ++ + + A + Sbjct: 238 SLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWV 297 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + L P LVG + L G+ G G+ G+ + MA+I Sbjct: 298 LIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVI 354 >gi|187780241|ref|ZP_02996714.1| hypothetical protein CLOSPO_03837 [Clostridium sporogenes ATCC 15579] gi|187773866|gb|EDU37668.1| hypothetical protein CLOSPO_03837 [Clostridium sporogenes ATCC 15579] Length = 366 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 5/298 (1%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ F + + + +I V + + + L + + ++ + Sbjct: 59 ILNPLVKFFERRFKIKRSLSILICYVITLGIVALVLSMIVPKVFQSIMDIFQNIPYFTNK 118 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK--TNGIDFIPRFASRFGMIF 160 G ++++ S + + K L + + G++ I F Sbjct: 119 GY---EMVNNLLANEEISNIINSSNVFKGNYKDLIDKIAGFTSVGLNTILNQTISFTTFM 175 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 ++ +I I L + ++ + + + + + R V +I+ + Sbjct: 176 VNLVFGLIIAIYVLNDREKFEYNGKRVVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKAL 235 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 ++ GL+ + P + + +I + MIP P ++ + + A Sbjct: 236 DSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALW 295 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + ++ + L P LVG + L G+ G G+ G+ + MA+I Sbjct: 296 VLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVI 353 >gi|146311563|ref|YP_001176637.1| putative transport protein [Enterobacter sp. 638] gi|145318439|gb|ABP60586.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 344 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 114/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL I P+ + + Sbjct: 7 TLNGLKIVIMLGMLVIILTGIRFAADIIVPFILALFIAVILNPLVQRMVRWRIPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+A ++ + I+ + L Y + EL +P++ S + + E W Sbjct: 62 VLAISLLITIIIMAMALLVTYLGTSLNELAR----------TLPQYRSKLVIPLQQLEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ E LK + + SI +++ + F + Sbjct: 112 LQR----AGIEVSVEELLKYVDPNAAMTLVTGLLAQLSSAMTSIFLLLLTVVFMLVEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + P + + + T I+I GLV + V Sbjct: 168 LPVKLQQMMVR--PVEGMGAIQRALDSVSRYLVLKTAISIVTGLVAWAMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ +L+ ++A + I + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAAIPPIAQVLVFSGFYDALIVLAGYLIINLVFGNILEPRMMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|30261954|ref|NP_844331.1| hypothetical protein BA_1922 [Bacillus anthracis str. Ames] gi|47527218|ref|YP_018567.1| hypothetical protein GBAA_1922 [Bacillus anthracis str. 'Ames Ancestor'] gi|49184795|ref|YP_028047.1| hypothetical protein BAS1783 [Bacillus anthracis str. Sterne] gi|49477439|ref|YP_036094.1| hypothetical protein BT9727_1762 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65319239|ref|ZP_00392198.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] gi|118477382|ref|YP_894533.1| permease [Bacillus thuringiensis str. Al Hakam] gi|165873197|ref|ZP_02217810.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167632969|ref|ZP_02391295.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167638397|ref|ZP_02396674.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170686503|ref|ZP_02877724.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170705931|ref|ZP_02896393.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177650969|ref|ZP_02933866.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190566446|ref|ZP_03019364.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196036762|ref|ZP_03104153.1| putative membrane protein [Bacillus cereus W] gi|196041872|ref|ZP_03109160.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196047019|ref|ZP_03114238.1| putative membrane protein [Bacillus cereus 03BB108] gi|217959430|ref|YP_002337980.1| hypothetical protein BCAH187_A2027 [Bacillus cereus AH187] gi|222095573|ref|YP_002529631.1| hypothetical protein BCQ_1913 [Bacillus cereus Q1] gi|225863884|ref|YP_002749262.1| hypothetical protein BCA_1988 [Bacillus cereus 03BB102] gi|227815257|ref|YP_002815266.1| hypothetical protein BAMEG_2668 [Bacillus anthracis str. CDC 684] gi|228914544|ref|ZP_04078153.1| hypothetical protein bthur0012_17740 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927017|ref|ZP_04090083.1| hypothetical protein bthur0010_17330 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933259|ref|ZP_04096115.1| hypothetical protein bthur0009_17260 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945567|ref|ZP_04107917.1| hypothetical protein bthur0007_17270 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229184160|ref|ZP_04311369.1| hypothetical protein bcere0004_17240 [Bacillus cereus BGSC 6E1] gi|229602130|ref|YP_002866326.1| hypothetical protein BAA_1992 [Bacillus anthracis str. A0248] gi|254684518|ref|ZP_05148378.1| hypothetical protein BantC_11765 [Bacillus anthracis str. CNEVA-9066] gi|254721276|ref|ZP_05183066.1| hypothetical protein BantA1_02310 [Bacillus anthracis str. A1055] gi|254734821|ref|ZP_05192533.1| hypothetical protein BantWNA_06590 [Bacillus anthracis str. Western North America USA6153] gi|254741222|ref|ZP_05198910.1| hypothetical protein BantKB_09477 [Bacillus anthracis str. Kruger B] gi|254755476|ref|ZP_05207510.1| hypothetical protein BantV_23652 [Bacillus anthracis str. Vollum] gi|254760012|ref|ZP_05212036.1| hypothetical protein BantA9_17011 [Bacillus anthracis str. Australia 94] gi|300117530|ref|ZP_07055317.1| hypothetical protein BCSJ1_01442 [Bacillus cereus SJ1] gi|30256580|gb|AAP25817.1| putative membrane protein [Bacillus anthracis str. Ames] gi|47502366|gb|AAT31042.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178722|gb|AAT54098.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49328995|gb|AAT59641.1| conserved hypothetical protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118416607|gb|ABK85026.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|164711071|gb|EDR16635.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167513698|gb|EDR89067.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167531781|gb|EDR94446.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170128933|gb|EDS97798.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170669579|gb|EDT20321.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172083430|gb|EDT68491.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190562581|gb|EDV16548.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195990645|gb|EDX54622.1| putative membrane protein [Bacillus cereus W] gi|196022123|gb|EDX60811.1| putative membrane protein [Bacillus cereus 03BB108] gi|196027244|gb|EDX65863.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|217066245|gb|ACJ80495.1| putative membrane protein [Bacillus cereus AH187] gi|221239631|gb|ACM12341.1| conserved hypothetical protein [Bacillus cereus Q1] gi|225790084|gb|ACO30301.1| putative membrane protein [Bacillus cereus 03BB102] gi|227006731|gb|ACP16474.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|228599275|gb|EEK56886.1| hypothetical protein bcere0004_17240 [Bacillus cereus BGSC 6E1] gi|228814085|gb|EEM60356.1| hypothetical protein bthur0007_17270 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826420|gb|EEM72197.1| hypothetical protein bthur0009_17260 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832752|gb|EEM78323.1| hypothetical protein bthur0010_17330 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844863|gb|EEM89905.1| hypothetical protein bthur0012_17740 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266538|gb|ACQ48175.1| putative membrane protein [Bacillus anthracis str. A0248] gi|298725065|gb|EFI65720.1| hypothetical protein BCSJ1_01442 [Bacillus cereus SJ1] Length = 337 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|290958928|ref|YP_003490110.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260648454|emb|CBG71565.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 347 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 101/311 (32%), Gaps = 26/311 (8%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ + + A + V+V+ + + + + ++V+ + A Sbjct: 54 PLHRRLVGA-GVHRSVAAGLTCVAVLGIVGGAVYVVAVALVETGDQIVASLRNA------ 106 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF---GMIFLD 162 ++ H + K F AS + + Sbjct: 107 --------------ADDLASHFGAAGTSLDDLAAHAKELLARFGGTAASNVISGVSVVGE 152 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + + +FFF RD L ++ + I+R + + G T+IA Sbjct: 153 AVAMAVLALFLVFFFLRDSHRAVAALRAMSPRGGADLVEAIARRAFEGVEGFMRGTTLIA 212 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCL 281 + + + + + VP + LG + + A +P AV++ + + + A + Sbjct: 213 LIDAVCITVGLLILDVPGAIGLGALVFVGAYLPYLGAFVSGAVAVLVALADRGVVIALWV 272 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAV 340 + L P + +++ + G G+LG+ + P+ A++ V Sbjct: 273 LGIVFAVQMLEGHVLMPMIQSRTVQMHPAVVMLAITAGASVAGVLGMLLAVPLTAAVLGV 332 Query: 341 IWKESIMAIKE 351 + + E Sbjct: 333 VHELRGRYAVE 343 >gi|238544544|dbj|BAH60896.1| hypothetical protein [Desulfotignum balticum] Length = 355 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 113/358 (31%), Gaps = 20/358 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R +PQ ++ + + + L ++ PV+++LII + + + Sbjct: 8 VRRYFSDPQVVILAVFLVVGLATVLLAGRHLVPVIASLIIAYLLEGLIQPL-QRVGAPRM 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV----VLANQHGIPVPRWLSDIPGG 116 I + + + L +L + +L+ +V + + +P +I Sbjct: 67 LAVGIVFLVFFLVLLALLFWLLPVLTRQATQLLQEVPDMLSASQTLILSLPEKYPNIFSE 126 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + D + R + + + I+ M + +FF Sbjct: 127 VEIENVLNQIRREAGHF------------TDRMLRQTLSSVVGVITLVVYIVLMPLLVFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +D + + ++ + V + + G + + Sbjct: 175 FLKDKDQLMGWIRRHLPRERGL-ASRVWQGVDVQLGNFIRGKFWEILIVWGASYLTFIFM 233 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-K 294 G+ + L + I ++P GA + V++ + + + + ++D Sbjct: 234 GLSFSLLLAFLVGISVLVPYIGAAVMTFPVALVAYFQFGWTGDLAWIILAYLVIQMLDGN 293 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L P L + L + ++ G+ G+F L L+ + E Sbjct: 294 VLVPLLFSEVVNLHPIAIIVAVLFFGGIWGVWGVFFAIPLAILLQGVLSAWPRRPDEE 351 >gi|152977617|ref|YP_001377134.1| hypothetical protein Bcer98_3955 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026369|gb|ABS24139.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 347 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 2/160 (1%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IAI ++ A W+ G P + L ++ ++ +IP G Sbjct: 188 EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLSLMIFLLGLIPVAGVI 247 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G+I + + A+ + L P + LP TF L+ Sbjct: 248 ISLFPLCMIAYNIGSITYVIYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFS 307 Query: 320 VRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISS 358 +G+ GL IG PV M L+ V+ S K EKI S Sbjct: 308 EHFLGVWGLIIGIPVFMFLLDVLDVTSDEIEKGANEKIES 347 >gi|46205309|ref|ZP_00048703.2| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 323 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 +D+ MI+ LFFF +DG +I + L E A ++I + + G Sbjct: 205 SQTVDFVAGFFVMIVVLFFFLKDGPAIWEFLLRPFEGARYARGQRIGETTVRTLGGYVRG 264 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 I+A + + +G + GVP + L V+ ++A IP GA ++ ++ L+ Sbjct: 265 TAIVAAVDAVAIGIGLAIVGVPLVLPLSVLVFLLAFIPLVGATLAGVLCALVALV 319 >gi|163740660|ref|ZP_02148054.1| hypothetical protein RG210_11172 [Phaeobacter gallaeciensis 2.10] gi|161386518|gb|EDQ10893.1| hypothetical protein RG210_11172 [Phaeobacter gallaeciensis 2.10] Length = 340 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 125/350 (35%), Gaps = 28/350 (8%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + ++L+F K APV+ A+++G P+ A + Sbjct: 12 RIMLLIVTALALGLALFFAKPVLAPVIFAVVVGIVVSPLADRLQGIGVARVIVAASLLLF 71 Query: 69 SVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 S + ++ L L + ++ ++ ++ + R + I S+ + Sbjct: 72 SCAIIVLLFLSLEPLISGVVEDLPKIKQEIKSWVYMMSGLLRGIEAI------SQEIEQT 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + +S F ++ ++ + I LFFF I Sbjct: 126 VGTGAAGPDVSTGFPTLMDALWVA----------PNFGAQVFIFIGTLFFFVLTRTDIYA 175 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 SLG+ L+ A + + F +T++ G G+ G+ S + G+ Sbjct: 176 AAGSLGKRLYRAEHE---------VARYFAAVTLVNAGLGVATAIGLATLGINSALIWGL 226 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPI 305 ++ I P+ ++ + A + + L +++ + + P VG + Sbjct: 227 AAMLLNFILYLGPLMMITGLTFVGMTQLGGAAALMPPALFLALNLIEAQFVTPAFVGHQL 286 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L L F +V G+ G +G + +M I + + S A + E+ Sbjct: 287 HLSPLVVFLAIVFGLWIWGPVGAIVALPVMLWIGQLLRSSAEARRLQGEE 336 >gi|78045196|ref|YP_360599.1| putative membrane protein, AMBIGUITY [Carboxydothermus hydrogenoformans Z-2901] gi|77997311|gb|ABB16210.1| putative membrane protein, AMBIGUITY [Carboxydothermus hydrogenoformans Z-2901] Length = 351 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 107/307 (34%), Gaps = 4/307 (1%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ S F + + I+ ++ LF+ + + E+ L + V + Sbjct: 47 PMVSYFEKRFNLTRAIGTGISLAILLILFLTVISSFLVKLVTELYRLANYVPDMLTNIKD 106 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 ++ I GG L+ ++ + Sbjct: 107 QITFM--IAGGNRFLGKLPPTLADSIKQNAEKLLNQVVEVGKNFFTSIFVGLAQVPEFII 164 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ +IA +FF +D + + ++ + + + + I+ Sbjct: 165 ILLIALIAAYFFSKDLPQYQRLVFNVLPEDYRQKSEYVLKEAIAAAFRFLKAQAILVGLS 224 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 ++ +L G + LG+I + ++P G + + LLI+G A + + Sbjct: 225 TILTIFGLYLIGAAYPLTLGLIIGFLDLVPIVGPSLIIFPWAGILLIQGKYLMAVEILIL 284 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + K + +V + L L T + G++ MG+LG+ GP+++ +I + Sbjct: 285 Y-LAISAFRKVVEAKVVAENLGLDPLATLISMYVGLKLMGVLGIAAGPIILLIIKALIDA 343 Query: 345 SIMAIKE 351 I+ + Sbjct: 344 EIINFHK 350 >gi|329115125|ref|ZP_08243880.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] gi|326695568|gb|EGE47254.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] Length = 345 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 90/287 (31%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +SVM +V + L + EL ++ ++ L ++ H Sbjct: 58 LSVMLFVLVLVGALSLVVHVSGPELTVQLSHLHEALTSERDALHNMLDSNPLGHAVLDHF 117 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + + G + +++ +IIA +F + Sbjct: 118 PRFLGGNMVPDGRAGSEGGMDFAGSMTNVLTSTFGSVGTMVVIIIAGVYFALSPHLYANG 177 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + + + G + G++ S L G+P + LG++ Sbjct: 178 ILRITPVAYRSTMRTVLLTTGHALTAWVAGQMLDMTVVGMLTWSGLSLLGMPLALPLGLV 237 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +P ++ + + A + A + PF+ +++ Sbjct: 238 AGLANFVPYLGTFIGAVPALLIALSVGPREAMMVAGLYAAIQTFEGYVMSPFIQKRAVRM 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P T +G+ G + A++ + + N+E Sbjct: 298 PPALTILSQTIFGAFLGMWGFIFASPITAVLLAVASRLSAPLPPNEE 344 >gi|291086376|ref|ZP_06355611.2| permease, PerM family [Citrobacter youngae ATCC 29220] gi|291068043|gb|EFE06152.1| permease, PerM family [Citrobacter youngae ATCC 29220] Length = 385 Score = 64.1 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 114/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + +A V Sbjct: 50 LLKLAALVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVRRP-----VAITLV 104 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L + E ++ + N+ +L ++ H+S Sbjct: 105 VVVMLIVLTALVGVLASSITEFMAMLPKYNKELTRKVLYLQEM------VPFLNLHMSPE 158 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L+ + L T + + + L ++++FM+ + Sbjct: 159 RMLQRMDSDKLMTFTTTLMTSLSGAMASVVL-LVMTVVFMLFEV--------RHVPYKLR 209 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G ++ L G+ + GV+ + Sbjct: 210 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGAIVWLGLALMGIQFALMWGVLAFL 268 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G+ IS I L+ I+ + + ++ L P ++G + L Sbjct: 269 LNYVPNIGSVISAVPPMIQALLFNGIYECVLVGALFLVVHMVIGNILEPRMMGHRLGLST 328 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 329 LIVFLSLLVWGWLLGPVGMLL 349 >gi|145631416|ref|ZP_01787186.1| hypothetical protein CGSHi22421_06177 [Haemophilus influenzae R3021] gi|144982953|gb|EDJ90462.1| hypothetical protein CGSHi22421_06177 [Haemophilus influenzae R3021] Length = 348 Score = 64.1 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 124/346 (35%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + I LS Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKILLSQRISDLTALSQ-------- 110 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L S + + E F + ++F+ R F + + + ++ +I F + Sbjct: 111 ---RFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVI----FMLAE 163 Query: 181 GFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ + + H + I R++ VI + ++ G+ + G Sbjct: 164 APTMKHKFAMVISSTPHDVAKEERHIDRVLQGVIGYLGIKSI-TSLLTGVGVFILLEACG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + ++ ++ IP G+ I+ + + L+ + + +V + Sbjct: 223 VQYAILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNII 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P ++G + L L F L+ +G +G+ + P+ MAL + Sbjct: 283 EPKMMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIAL 328 >gi|187935233|ref|YP_001886750.1| permease [Clostridium botulinum B str. Eklund 17B] gi|187723386|gb|ACD24607.1| permease [Clostridium botulinum B str. Eklund 17B] Length = 370 Score = 64.1 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 61/374 (16%), Positives = 120/374 (32%), Gaps = 22/374 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLY-----------FLKGFFA---PVLSALIIGFTSWPIYS 49 T+ +IM I+ + LY +K FF+ P ALI + PI Sbjct: 2 TINKNVKYKDILIMAIVGIVLYKIIDNYQFFFNIVKHFFSIMSPFTYALIFAYILNPIMM 61 Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 F + + S ++ + + I+ F + + ++ +V + + W Sbjct: 62 IFEKRFKFSRGKSILVTYAIITGIIIMFFFFTIPSLVDSIASIIKEVPNYMET---IQEW 118 Query: 110 LSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 ++ SEL L L + + + + + + Sbjct: 119 INTAIKNPKLSELIIDAGLVDKIELLSIKMGNFTITILQGMLGYLLSLTGNLVKIVFGFL 178 Query: 169 FMIIALFFFYRDG--FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I L +DG + + + + K+ K+I I + G Sbjct: 179 IAIYVLSD--KDGLLHGLKTITYIILKEKKASELIKVCNTYSKMIGVYIGTKAIDSAIIG 236 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 L+ + P + L +I AI MIP P V + I + A +F+ Sbjct: 237 LISLIGLVIVKAPYALLLSIIVAITNMIPYFGPFIGEVVGAGVCIFVSPMKALIVFILLL 296 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L P L+G + + G++ G G +G+ + +A I + + + Sbjct: 297 LIQQFDAWYLDPKLIGAKVGVKPFWIIMGVIIGGAFWGPIGMLLASPTIATINIYYIRLV 356 Query: 347 MAIKENKEKISSNF 360 K + N Sbjct: 357 KFYKSKNPSLFKNL 370 >gi|163736917|ref|ZP_02144335.1| hypothetical protein RGBS107_02203 [Phaeobacter gallaeciensis BS107] gi|161389521|gb|EDQ13872.1| hypothetical protein RGBS107_02203 [Phaeobacter gallaeciensis BS107] Length = 340 Score = 64.1 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 129/361 (35%), Gaps = 31/361 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILV---SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M +ML+ + +++ L +L+F K APV+ A+++G P+ Sbjct: 1 MLNSMLSDRAARIMLLIVTALALGLALFFAKPVLAPVIFAVVVGIVVSPLADRLQGIGVA 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 A + S + ++ L L + ++ ++ ++ + R + I Sbjct: 61 RVIVAASLLLFSCAIIVLLFLSLEPLISGVVEDLPKIKQEIKSWVYMMSGLLRGIEAI-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 S+ + + + +S F ++ ++ + I LF Sbjct: 119 ----SQEIEQTVGTGATGPDVSTGFPTLMDALWVA----------PNFGAQVFIFIGTLF 164 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 FF I SLG+ L+ A + + F +T++ G G+ Sbjct: 165 FFVLTRTDIYAAAGSLGKRLYRAEHE---------VARYFAAVTLVNAGLGVATAIGLAT 215 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-K 294 G+ S + G+ ++ I P+ ++ + A + + L +++ + Sbjct: 216 LGINSALIWGLAAMLLNFILYLGPLMMITGLTFVGMTQLGGAAALMPPALFLALNLIEAQ 275 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P VG + L L F +V G+ G +G + +M I + + S A + E Sbjct: 276 FVTPAFVGHQLHLSPLVVFLAIVFGLWIWGPVGAIVALPVMLWIGQLLRSSAEARRLQGE 335 Query: 355 K 355 + Sbjct: 336 E 336 >gi|187922753|ref|YP_001894395.1| hypothetical protein Bphyt_0747 [Burkholderia phytofirmans PsJN] gi|187713947|gb|ACD15171.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 358 Score = 64.1 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 123/343 (35%), Gaps = 9/343 (2%) Query: 5 MLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + W+ + + + + L+ L P L I+ + P + + ++ A Sbjct: 9 TPVQRRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRVPR-GLAA 67 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + + +L + E +L +V + H V WL P Sbjct: 68 LLMMLLFTLVMTLLVLLVLAVIQKEAPQLKQQVPVFFAH---VNAWLQ--PKLAMLGLAD 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + L + + + G + + +++ + + LF+ D Sbjct: 123 SLDFASIRDLVMGQLEGSAQTVAVYAWTYIRTSGNVMVTVVGNVVLVPLVLFYLLYDWNR 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + +++R + +++ G ++ + A +A + Sbjct: 183 MLARAQVVVPRRWLDKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAVALTIARFEIALP 242 Query: 244 LGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G+ T + IP G A A+ LL G+ + + + + + L P LV Sbjct: 243 VGIFTGLAVFIPYIGFATGLALALLAALLQFGDWYGFGAVAVIYGVGQILESFYLTPRLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G I L L F L+ + G G+ + + A+++V +E Sbjct: 303 GERIGLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAVRE 345 >gi|17227705|ref|NP_484253.1| hypothetical protein all0209 [Nostoc sp. PCC 7120] gi|17135187|dbj|BAB77733.1| all0209 [Nostoc sp. PCC 7120] Length = 373 Score = 64.1 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 117/330 (35%), Gaps = 19/330 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++L + + + +A+++ F +PI F ++ + + + + Sbjct: 26 LLLQVVQYFQPLVNVFAAAVLLAFVLNYPIQ--FFQERGVKRNLAIGSVLLLAVVILVGL 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + ++ ELV+ + P W+ + A + W P +L L Sbjct: 84 GVTLVPLIIEQINELVNIL----------PYWIDSGGQQIDAFQKWAATQQLPVNLSGLV 133 Query: 138 ETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L+ + F + ++++ ++ + +G + L Sbjct: 134 TQLLEKVSSQLQSVTGKILSFAFDTIGVVVNVLLTVVLTIYMVLNGDRLWDGLYQWFPTH 193 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ +I+ + + F+G + GL + A+ VP + G+ + ++ P Sbjct: 194 IG---SKVRQILREDFHNYFIGQATLGAILGLTITLAFVTLRVPLALLFGLAIGLFSLFP 250 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G I + VS+ + ++ N + + + + P ++G L + Sbjct: 251 FGTGIGISIVSLLVALQ-NFWLGVEVLGVAVAIDQVNSNFIAPRILGNLTGLNPVWVVIS 309 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ G + G+LGL I + I I Sbjct: 310 LLLGAKLGGVLGLLIAIPTASFIKDIADSW 339 >gi|170757809|ref|YP_001780772.1| putative transporter [Clostridium botulinum B1 str. Okra] gi|169123021|gb|ACA46857.1| putative transporter [Clostridium botulinum B1 str. Okra] Length = 367 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 98/297 (32%), Gaps = 2/297 (0%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ F + + +I V + + ++ L + + ++ + Sbjct: 59 ILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLSMIVPKVFQSIMDIFQNIPYYTNK 118 Query: 103 GIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 G V L + A + + L +F + G++ I F + Sbjct: 119 GYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKVASF-TSVGLNTILSQTISFTTFMV 177 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +I I L + ++ + + + + + R V +I+ + Sbjct: 178 NLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALD 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 ++ GL+ + P + + +I + MIP P ++ + + A + Sbjct: 238 SLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWV 297 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + L P LVG + L G+ G G+ G+ + MA+I Sbjct: 298 LIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVI 354 >gi|153940261|ref|YP_001390495.1| putative transporter [Clostridium botulinum F str. Langeland] gi|152936157|gb|ABS41655.1| putative transporter [Clostridium botulinum F str. Langeland] gi|295318576|gb|ADF98953.1| putative transporter [Clostridium botulinum F str. 230613] Length = 367 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 98/297 (32%), Gaps = 2/297 (0%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ F + + +I V + + ++ L + + ++ + Sbjct: 59 ILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLSMIVPKVFQSIMDIFQNIPYYTNK 118 Query: 103 GIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 G V L + A + + L +F + G++ I F + Sbjct: 119 GYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIASF-TSVGLNTILSQTISFTTFMV 177 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +I I L + ++ + + + + + R V +I+ + Sbjct: 178 NLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALD 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 ++ GL+ + P + + +I + MIP P ++ + + A + Sbjct: 238 SLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWV 297 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + L P LVG + L G+ G G+ G+ + MA+I Sbjct: 298 LIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVI 354 >gi|259503909|ref|ZP_05746811.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259168120|gb|EEW52615.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 380 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 83/256 (32%), Gaps = 5/256 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + +V ++ H L + K + + L Sbjct: 107 IPPVVKEITSLVTHLPQTASGLQRLLNDTIQHSPLKKVDLTTYYRQFDHQ--LANYAQLV 164 Query: 149 IPRFASRFGMIF---LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + +SR G + + + I + + LF+ +DG + + ++ Sbjct: 165 LKGLSSRIGDVINAVTNITVVTITVPVMLFYMLKDGSKLGPSIQKWLSPHHAKEVDQLLG 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G I + + Y L P + LG++ + +IP P A Sbjct: 225 KMNDTLSSYIAGQVIECLFVAVFTSLGYLLIHQPLALVLGIVAGLCNIIPYIGPYIGIAP 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + + + + I + P ++G +++ L L+ G+ Sbjct: 285 ALFVSLTMAPQKLILVIIVVIVVQQIDGNVIYPNIIGKTLQIHPLTIILLLLAAGHIAGI 344 Query: 326 LGLFIGPVLMALIAVI 341 G+ + A++ I Sbjct: 345 AGMILCIPFYAVLKTI 360 >gi|168182996|ref|ZP_02617660.1| putative transporter [Clostridium botulinum Bf] gi|237794435|ref|YP_002861987.1| putative transporter [Clostridium botulinum Ba4 str. 657] gi|182673805|gb|EDT85766.1| putative transporter [Clostridium botulinum Bf] gi|229261628|gb|ACQ52661.1| putative transporter [Clostridium botulinum Ba4 str. 657] Length = 367 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 98/297 (32%), Gaps = 2/297 (0%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ F + + +I V + + ++ L + + ++ + Sbjct: 59 ILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLSMIVPKVFQSIMDIFQNIPYYTNK 118 Query: 103 GIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 G V L + A + + L +F + G++ I F + Sbjct: 119 GYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIASF-TSVGLNTILSQTISFTTFMV 177 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +I I L + ++ + + + + + R V +I+ + Sbjct: 178 NLVFGLIIAIYVLNDREKFTYNSKRVVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALD 237 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 ++ GL+ + P + + +I + MIP P ++ + + A + Sbjct: 238 SLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWV 297 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + L P LVG + L G+ G G+ G+ + MA+I Sbjct: 298 LIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVI 354 >gi|283785182|ref|YP_003365047.1| AI-2 transport protein TqsA [Citrobacter rodentium ICC168] gi|282948636|emb|CBG88227.1| AI-2 transport protein TqsA [Citrobacter rodentium ICC168] Length = 344 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 122/346 (35%), Gaps = 22/346 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL I P+ + + ++ Sbjct: 7 TLNGLKIVIMLGMLVIILTGIRFAADIIVPFILALFIAVVLNPLVQRMVKLRVPRVLAIS 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + VM + ++ L N+ +P++ S + + E W Sbjct: 67 ILMAIIVMVMVVL---------------LAYLGTSLNELARTLPQYRSSLVIPLKHIEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S+ L + + + ++ SI +++ + F + Sbjct: 112 LLRSGIGVSVDELVKYIDPNAAMTLVTSLLTQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L P + + + T I+I GLV+ + V Sbjct: 168 LPTKFKHLMTR--PVEGMAAIQRAIDSVSHYLVLKTAISIVTGLVVWAMLAALEVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ +L+ G +++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAAIPPIAQMLVFGGLYDALVVLAGYLVINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L F L+ +G +G+ + L ++ + ++++ Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTVAG 331 >gi|94496068|ref|ZP_01302647.1| hypothetical protein SKA58_15837 [Sphingomonas sp. SKA58] gi|94424760|gb|EAT09782.1| hypothetical protein SKA58_15837 [Sphingomonas sp. SKA58] Length = 360 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 107/347 (30%), Gaps = 20/347 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + W + I + L +L A+++ + I + Sbjct: 26 KRAGVWFGLAIAIALTALLAQPLMLILGAMVLATMMDGGSRLLGRILPIGRGWRLTIVLL 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + + + + + V + W+ + S+L Sbjct: 86 SAVAFLVWTFYLTGSSLAAQAQAMRTIVEAQVTR---IGGWMQQLGITATPSDL------ 136 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + R + G + M++ F + + + Sbjct: 137 ----------KGLAQQAMSSMGRVTAALGT-AMGAITGGAMMLVLAIFLATEPKLYERGV 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A + I+ + +R G I EG+ W+ GVP LG++T Sbjct: 186 AWMLPMDKRAQFYTIADKMGWTLRRLMFGRIIGMSVEGVGTWLLLWVFGVPMAGLLGILT 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A +P I + + + G + + + + P + + L Sbjct: 246 GLLAFLPNIGAIISGVLIVLVGFSGGMDTGLYAVGVYLVVQIVDGYLIVPMVAKRAVDLA 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G++GLF+ ++A+I V +E A + +++K Sbjct: 306 PALVLAAQILFGALFGIIGLFLADPIVAMIKVYLEERSKASRSDRDK 352 >gi|149280421|ref|ZP_01886541.1| permease [Pedobacter sp. BAL39] gi|149228835|gb|EDM34234.1| permease [Pedobacter sp. BAL39] Length = 379 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 132/346 (38%), Gaps = 16/346 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E L + + + + +I + L + P++ A I P++ F+ +K+ Sbjct: 1 MTEMPLTVKRSLELLGIVLIGLVLVIGQDIIMPIIMAFFISIVLLPVF-RFLRRKKVPEA 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + ++ + + F L + + N H V W+ I Sbjct: 60 LAIILPILLLVIFVGLIIFFFSSQIALLVADFPQIKSNVNVHLKSVSAWIGRI------- 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S + + ++E + + + + + ++ + I L FY+D Sbjct: 113 ----SDFSTTKQINFINEKSDDLLRMAGSAASGAAVTLSSIFVFVGLLPIYIYLMLFYKD 168 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + K+ +I++ +G+ I ++LG L G+ Sbjct: 169 --ILLRFIFMWFKPDHHPKVKEAIYETEAIIKNYLVGLLIQVTYMTILLGGILLLIGIKH 226 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +GVI AI+ +IP + V + L ++ + A F+ + L P Sbjct: 227 ALLIGVIFAILNLIPYVGALIGNIIGVLLTLTSSTELWPVITVLAVIAGVQFLDNNILMP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +VG +K+ L G++ G G+ G+F+ ++A++ +I+ Sbjct: 287 RIVGSKVKINALFAILGVIIGGSIAGVSGMFLSMPIIAVLKIIFDR 332 >gi|309972500|gb|ADO95701.1| Putative permease [Haemophilus influenzae R2846] Length = 348 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 124/346 (35%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + I LS Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKILLSQRINDLTALSQ-------- 110 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L S + + E F + ++F+ R F + + + ++ +I F + Sbjct: 111 ---RFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVI----FMLAE 163 Query: 181 GFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ + + H + I R++ VI + ++ G+ + G Sbjct: 164 APTMKHKFAMVISSTPHDAAKEERHIDRVLQGVIGYLGIKSI-TSLLTGVGVFILLEACG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + ++ ++ IP G+ I+ + + L+ + + +V + Sbjct: 223 VQYAILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNII 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P ++G + L L F L+ +G +G+ + P+ MAL + Sbjct: 283 EPKMMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIAL 328 >gi|24214038|ref|NP_711519.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45658233|ref|YP_002319.1| putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194909|gb|AAN48537.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45601475|gb|AAS70956.1| conserved putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 355 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 128/348 (36%), Gaps = 22/348 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++F I+VSL+ L P++ A +I + ++ S +++ +M + Sbjct: 20 LIVIFTIVVSLWGLHLLAVPIVMAFLIFYAFNGTINNLESLGVPR-----ILSIAILMFV 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 VP+ F + + + W D+ + T +L + Sbjct: 75 ISVPIYFFINSIAPPI---------VSTLNPLLKNWKQDLDDAKFKYLTVTVNLQFNEFP 125 Query: 134 KILSETF----LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +ET L + + F +I + F F +G + + L Sbjct: 126 SSWNETIRPDELIKKIAELMHEQVKAFVSYIPTLIGYLIITPLFAFLFLLNGNGMYKSLI 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL + + ++ + + + + + I +V G ++ G+P G+ Sbjct: 186 SLIPNRYFEMALMVTYKINEQLTNYLKSLMIQGAIICVVSGIGFYFIGLPYFYIFGLFLG 245 Query: 250 IMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTL-RPFLVGGPI 305 + +P PI + + L+I G+ + + + ++D L +P ++ G + Sbjct: 246 VANSVPYLGPIMGAIPPLFFALVIGGDGTTELLTSILIVVAVAQMIDNFLIQPIVISGSV 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + + G +GL+G+ I + A++ V + ++K++ Sbjct: 306 SLHPIVVVGAVTVGGAALGLVGMLIAVPIAAILKVTIQTLYSSMKDHN 353 >gi|168702667|ref|ZP_02734944.1| hypothetical protein GobsU_24281 [Gemmata obscuriglobus UQM 2246] Length = 357 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 98/325 (30%), Gaps = 28/325 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L P+L A+++ + P +S + T ++ +V L F+ + Sbjct: 42 LASVLRPLLVAVLLAYVLMPYHSRLRKQVG---TPASIAILAGGTAAALVGLAFITSASV 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L +++ + ++ L +H + ++ Sbjct: 99 LALRDDLPQLTQR---------------ADDLFVTLERGVSAHAPWVSRNDTRPMRVQAT 143 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + I + + + L F +G + ++ +++ Sbjct: 144 EQIGLVVRLIVAGVATAMIEAGVVGLYLLFLLLEGTQLPARVRRAYPKERAEQILQVAGE 203 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TA 264 V + S + +G+ W GV + V+T + IP + Sbjct: 204 VNAAVISYLKAKVKSSFFLAAPVGAVLWATGVNFSLLWAVLTFLCNFIPYIGTVVAYSLP 263 Query: 265 VSIYLLIKGNIF----NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V L G + A L +W + P ++G + + L L Sbjct: 264 VGFAFLWFGPSWEPFAAAALLLVWHGASAS----VIEPMILGSAVGISPLVILGSLAFWG 319 Query: 321 RTMGLLGLFIGPVLMALIAVIWKES 345 G+ G+F+ L A++ ++ + Sbjct: 320 LLWGVPGMFLAVPLTAVLTIVMEHF 344 >gi|315639853|ref|ZP_07894985.1| permease [Enterococcus italicus DSM 15952] gi|315484387|gb|EFU74851.1| permease [Enterococcus italicus DSM 15952] Length = 351 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 111/352 (31%), Gaps = 23/352 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L + R +++ +++ +Y L+ + I F ++ SST L Sbjct: 5 EAFLENIKLRRIVVLLVLIGGIYILRSMLTLLFLTFIFTFLAYKSVKKLKKLIPISSTIL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V ++ + + + + +V +V QH Sbjct: 65 VVAIYGLIVLGMYLVVTKYVPIVIDQSIMMVDSLVRFYQHNPKNSDSFFR---------- 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + N + + + FG + + ++ I FFF + Sbjct: 115 -----AAHEVIDQFNLLEYLKNRLTIVLDYIQSFGKVTIAAMMAFILS----FFFLIEEK 165 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + F +++ IA+ ++ A Sbjct: 166 RTFEFSRLFLHGEFAWFFQDLHYFFVKFSNTFGVVIEAQLFIALINTVLTCLALVAMNFT 225 Query: 240 SHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L V+ I+++IP G IS +SI G + + + L + L P Sbjct: 226 QIPSLVVMIFILSLIPVAGVIISTIPLSIIAYSTGGMNDVVIILLVILAIHLLESYFLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ ++P TF L+ G+ GL +G + I + K A + Sbjct: 286 KLMSSKTEIPIFFTFVILLFSEHYFGVWGLVMGIPVFTFIFDLLKIKNPAGR 337 >gi|229102560|ref|ZP_04233265.1| UPF0118 membrane protein [Bacillus cereus Rock3-28] gi|228680882|gb|EEL35054.1| UPF0118 membrane protein [Bacillus cereus Rock3-28] Length = 339 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L QH P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQH-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKDRIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVLYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|325570443|ref|ZP_08146220.1| permease [Enterococcus casseliflavus ATCC 12755] gi|325156653|gb|EGC68830.1| permease [Enterococcus casseliflavus ATCC 12755] Length = 366 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 118/338 (34%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+ + F PVL ++ I + P ++ + ++ S L + V ++ Sbjct: 29 ILFVFRLLEAIFSSVFLPVLISIFIFYIFLPFFNWVKKRTKKKSIALYSTLLLIVFAAYL 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + EM ++++ + I S L S+ I Sbjct: 89 I-VQVIGPALAYEMGRFINQIPIIINLVIDTID----------HSYLEELFGPFIDSIDI 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + I + + + + L + ++DG + L S Sbjct: 138 SQASNFALQFITGATNSLTSLISIVSHSAIVLFTIPLLLVYMFKDGEKVPDFLASKTPKN 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ + + G ++ + + L G+ + + LG+I ++ +IP Sbjct: 198 YQGLMRQLCSDFHQAASAYIGGKLLVCSYVAVSSYFIFSLLGLQNALLLGLICGVLDIIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + +I A L + I + P ++ + + + F Sbjct: 258 YFGPFIGAAPAFLFALSQDIRTAIFLIVGITIIQLGESYLVSPLVMKKVLHIHPIIAVFL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +G +G+ + + +++ + + +E K Sbjct: 318 LLIAGNLLGFVGMIVALPVYSIVMAMSGTLLRFFQERK 355 >gi|190572447|ref|YP_001970292.1| putative transport protein [Stenotrophomonas maltophilia K279a] gi|190010369|emb|CAQ43977.1| putative transport protein [Stenotrophomonas maltophilia K279a] Length = 369 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 105/333 (31%), Gaps = 15/333 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + +L+ + PVL A+ PI + + + + Sbjct: 34 VLATLAVGYTLWAAQDIILPVLLAMFFALVGNPILRLLQKLWIPRA--------LGALLI 85 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L + + + A Q V R + D+ + + ++ + Sbjct: 86 LGAGLGVTGSLAVQLIGPAMEWAQEAPQQLRKVARQVQDLTKPVQQANQAAENFARVAGG 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + +D R +R + + +++ LFF + Sbjct: 146 DSNHKVQVIRTQLDDPYRMLTRAPRLAASV---LAVVLLTLFFMIYGQSLQRAAIALFPN 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAIM 251 + I R + + + L +++I GLV L G+ + G + A++ Sbjct: 203 RQQQRFTTDILRSIEREVSRYVLTISVINTLVGLVFAGVLMLLGIGLQEALLWGTVAALL 262 Query: 252 AMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 P P+ A+ + + + A + + + P ++G +KL Sbjct: 263 NFAPYVGPLIGVALMLLMGFVEFRDPLQALLPAAAYLGLHTLEGQMVTPIVLGRRMKLSP 322 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L+ G++GL + L+ I ++ Sbjct: 323 LVLILALMVFGWAWGMIGLLLAVPLLVCIKLVL 355 >gi|159046446|ref|YP_001542117.1| hypothetical protein Dshi_3908 [Dinoroseobacter shibae DFL 12] gi|157914205|gb|ABV95636.1| protein of unknown function UPF0118 [Dinoroseobacter shibae DFL 12] Length = 383 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 122/334 (36%), Gaps = 8/334 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ +++ + +L + PV+ A+ + P+ + + + ++L + Sbjct: 28 GLVAALLVIAMFAALRAMAPIAIPVVIAVFVALAVLPMDRAVAERLPKPLSWLGRAFVMV 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + Y + ++ + V + + L G +++WT L+ Sbjct: 88 FLLSILATFIVGLSYCVTQIATQLPDVSERLSNVL-----LERASSGQGNTDVWTAALTQ 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ L ++ A + ++ + + + + +LD Sbjct: 143 LRNMLDDQGAALADMAFNWASGVAQGVASSTGALLAGLFLVLFLVLLALSEADNWAAKLD 202 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ W++++ + + +R ++ + + + + + G++T Sbjct: 203 NILTD-RDRPWRQVTTRLGQALRRFLATRAVMGLITAVAYTLWFLPFDLDLLLVWGILTF 261 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +M IP G+ +S SIY + + A L + ++ L P + G + + Sbjct: 262 LMNFIPNLGSIVSGVLPSIYAFLTLDPGTALLLAAGLVLIEQVIGNWLDPRVQGNSVAVS 321 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L ++ G+ G F+ P+ +A++ Sbjct: 322 PLVILVAVLFWGWFWGIAGAFLATPITLAIMIFC 355 >gi|152996401|ref|YP_001341236.1| hypothetical protein Mmwyl1_2379 [Marinomonas sp. MWYL1] gi|150837325|gb|ABR71301.1| protein of unknown function UPF0118 [Marinomonas sp. MWYL1] Length = 345 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 111/331 (33%), Gaps = 22/331 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E ++ + II+ +L P + ++ I P +S + T Sbjct: 1 MSEQHKGIHWLVGFAAFVIIIAALKEASQIVVPFMLSVFIAIICAPAMASLRRR--NVPT 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +L+++ V V+ + I + L + +P + M + Sbjct: 59 WLSILLVVLVILVGISSIAVLVGASLDNFSN-------------ELPTYKKRFGEEMSSL 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L S + + + + G + L ++ +I LF + Sbjct: 106 IQMINRLGLHVSYDQVKGYIDPSALMQMVANALRGLGSALTNLVLVVMIVIFILF----E 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++L SL K + V R + + ++ G+++ W+ GV Sbjct: 162 AVELPKKL-SLAFSDASKSMDKFDSFIKSVNRYLVIKTLL-SMLTGVLITFFMWVLGVDF 219 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV ++ +P G+ I+ + ++ +A + + IV + P Sbjct: 220 PILWGVCAFLLNFVPNIGSIIAAVPAVLLAFVQLGSLSAGLVAGVFLVVNLIVGNVIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +G + L L F L+ G +G+ + Sbjct: 280 YMGRGLGLSTLVVFLSLLLWGWVFGPVGMLL 310 >gi|20091055|ref|NP_617130.1| permease [Methanosarcina acetivorans C2A] gi|19916148|gb|AAM05610.1| permease [Methanosarcina acetivorans C2A] Length = 357 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 100/323 (30%), Gaps = 16/323 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI--YSSFISKKEESSTFLAVIATV 68 + + + + YF F +L A++I I ++ F+ + + + + Sbjct: 22 LTTILFVLFFAILFYFQDIFIVLILGAVLILIAEKMIQFFNRFMDSFPKFNRKAVGLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L L + + L+ Q G LS Sbjct: 82 TGAGLI---FLLFVGSQVQALGVLIGDFSNIQQDYAS---------GASALFSEHESELS 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I+ L+ G + ++ + + +++ I + Sbjct: 130 KLADSGIIKPQDLQKIGNTIFSGVTDLVSKVSYYLFTGLLIIPLMFGVYFKHHNKIGSYI 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + + F + + GL+ ++L G+ LG++ Sbjct: 190 QTYAPPEHAEGITRALKRMGRELEDFFSAKMLESAVVGLICCIGFYLGGLEGWFYLGILA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT-LRPFLVGGPIKL 307 + +IP P+ + + + A + I +D L PF++ + + Sbjct: 250 GFLNIIPYLGPLLGAIPPVIVGYIDSPMTALF-AVITVIVAQTIDNLYLIPFMISEKVDI 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 L + + + +G LG+ + Sbjct: 309 NPLLSVVLTLAASKLLGPLGMVL 331 >gi|307243280|ref|ZP_07525451.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] gi|306493408|gb|EFM65390.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] Length = 386 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 109/331 (32%), Gaps = 3/331 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKK---EESSTFLAVIATVSVMCLFIVPLLFLF 82 LK F A ++ F + + + ++ + + + LF Sbjct: 46 ILKPFIVGFSLAYLLNFIMEFVEGKIVLNLMPKGGKRLVRYLSMIITYILVTLFVFLFFK 105 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +V V + ++ + E ++ + S Sbjct: 106 FIFPQVAESVVKLVTDFPHIVNKIYNYIDKFISHINLPEPTRMAVNQKVNEIGKSAIDFA 165 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 TN + F F + L II I L + + ++ K Sbjct: 166 TNLVPFFANFFLNIVKSVWNLVLGIIISIYILADKEGFFRLCRKFIFAIFTKDTSDNILK 225 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++R+ + +G I ++ ++ + +P + L I I +IP P Sbjct: 226 VTRLSNDIFGKFIIGKIIDSVIIAIITFIILSIVKMPYVILLTFIIGITNVIPFFGPFIG 285 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 S+ L++ + A L + I + + P ++G I + F L+ + Sbjct: 286 AIPSVLLVLIVDPIKALWLIVIIFIIQQLDGNVIGPKILGDSIGISSFWILFSLLVAGKF 345 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ IG L A+I I E+I + K Sbjct: 346 FGIIGMVIGVPLFAVIYTIVAETINDRLKTK 376 >gi|228994155|ref|ZP_04154055.1| hypothetical protein bpmyx0001_48780 [Bacillus pseudomycoides DSM 12442] gi|229000224|ref|ZP_04159793.1| hypothetical protein bmyco0003_47770 [Bacillus mycoides Rock3-17] gi|229007747|ref|ZP_04165338.1| hypothetical protein bmyco0002_46250 [Bacillus mycoides Rock1-4] gi|228753517|gb|EEM02964.1| hypothetical protein bmyco0002_46250 [Bacillus mycoides Rock1-4] gi|228759556|gb|EEM08533.1| hypothetical protein bmyco0003_47770 [Bacillus mycoides Rock3-17] gi|228765607|gb|EEM14261.1| hypothetical protein bpmyx0001_48780 [Bacillus pseudomycoides DSM 12442] Length = 344 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 1/156 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IAI ++ A W+ G P + L ++ ++ +IP G Sbjct: 188 EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVI 247 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G+I + + A+ + L P + LP TF L Sbjct: 248 ISLVPLCMIAYNIGSITYVVYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLTFS 307 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G+ GL IG + + + + I+++ K Sbjct: 308 EHFLGVWGLIIGIPIFVFLLDVLDVTSDEIEKDSAK 343 >gi|260437802|ref|ZP_05791618.1| sporulation integral membrane protein YtvI [Butyrivibrio crossotus DSM 2876] gi|292809826|gb|EFF69031.1| sporulation integral membrane protein YtvI [Butyrivibrio crossotus DSM 2876] Length = 324 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 112/324 (34%), Gaps = 34/324 (10%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + ++ AP + ALII + +K + ++ ++ M L + + Sbjct: 21 VIYIVFKYMLPVVAPFIIALIISVLVDRPVTFLENKCHIKRSIGTLVIVIAAMALLCLFV 80 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++ + ++K+ + P +L + + Sbjct: 81 CYGGKILVKQVYDFINKI----------------------------EEYKLPFNLNMDIK 112 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + + + G +S S+ +++F Sbjct: 113 VINEKIVSGVVDNSPGYISGFTMVFT---GVAVFIMATVFISGD-MSSIRSSVKKNIFGK 168 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + R + V+ + II ++ ++ P + LG++ + +P G Sbjct: 169 EIIYLGRRLKTVLGNYLKTELIIMAITCVICCVGLFIMKNPYALLLGIVIGFVDALPILG 228 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 F + L+ + A+ + + I + + L P L+G + + Sbjct: 229 TGTIFLPWVLVLVFMHRLKQASMIMILYLICYYT-RQFLEPKLMGDKFGMSPTVMLITIY 287 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G++ G++G+F GPV + LI I Sbjct: 288 AGLKLFGVMGVFTGPVALILIREI 311 >gi|23011708|ref|ZP_00051989.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 454 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 2/132 (1%) Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIK 272 F+ ++ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 48 FIAQLVLNLAFGLVIGVGLWFIGVPSPILFGVIAGIARFVPYIGAVISAVLPLAIAVAVD 107 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 A + + + I + P L G + + G +GL + Sbjct: 108 PGWSMAIQVAILFVVVEPIAGHVIEPLLYGHSTGISPVAVILAATIWTFLWGPIGLLLAT 167 Query: 333 VLMALIAVIWKE 344 L + V+ + Sbjct: 168 PLTVCLVVLGRH 179 >gi|309774561|ref|ZP_07669587.1| putative permease [Erysipelotrichaceae bacterium 3_1_53] gi|308917676|gb|EFP63390.1| putative permease [Erysipelotrichaceae bacterium 3_1_53] Length = 394 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 30/246 (12%), Positives = 81/246 (32%), Gaps = 7/246 (2%) Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFF 177 + + ++ + + + TN I+ + AS + S + + Sbjct: 136 DYRIEDITQVEQFIQMPWEKIVTNVINLLSGSASGILSSATGFVSSFAVGFTGFMFSLYL 195 Query: 178 YRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + +Q+ + F + V ++ S G A ++ Sbjct: 196 LSGKENFIRQMRKVTAAFFGFDNSSTIFHYASRVNRIFSSFIGGQLTEACILWVLYYVFM 255 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L P + + A+ +++P + +V +++ + + ++ + + D Sbjct: 256 RLFQFPYPELICTLIAVCSLVPVFGSMFAMSVGAIMMLSKDPLQSVWFIVFYQVLSYFED 315 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P +VG + LP L + G+ G+ + A + V + E + + Sbjct: 316 NVIYPRVVGNSVGLPGLWVLLSIFVFGDLWGVFGMVMAVPTTACLYVFFTEFVNNRLRKQ 375 Query: 354 EKISSN 359 + I + Sbjct: 376 KLIVTE 381 >gi|331007495|ref|ZP_08330665.1| hypothetical protein IMCC1989_1586 [gamma proteobacterium IMCC1989] gi|330418700|gb|EGG93196.1| hypothetical protein IMCC1989_1586 [gamma proteobacterium IMCC1989] Length = 345 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 92/259 (35%), Gaps = 14/259 (5%) Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 N +P + + + + W K+ E + + + F Sbjct: 83 SSVNSFTANIPEYQARLTVLSSGLQSWLSGWGIAIDPKLWREMVNPSAALTIAGNTLTSF 142 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G I D +++ + F + + S +L + + Sbjct: 143 GNIMTDG----FLILLTVIFILTEEINFSDKLTQASTK--SEKTLEALSRFTDSLNKYMA 196 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNI 275 T++++ G+++ A + GV + G++ ++ IP G+ ++ + +++ + Sbjct: 197 IKTLVSMATGVLVMIALAIIGVDYPILWGLLAFLLNFIPTFGSILAAVPPVLLAVVQLGV 256 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A + ++ + IV L P +G + L L F LV G +GPV M Sbjct: 257 GEAFFIAIFYVLVNVIVGSVLEPRFMGKGLDLSSLVVFLSLV-------FWGWILGPVGM 309 Query: 336 ALIAVIWKESIMAIKENKE 354 L + +A++ +++ Sbjct: 310 LLSVPLTIMVKIALENSED 328 >gi|52143494|ref|YP_083335.1| hypothetical protein BCZK1740 [Bacillus cereus E33L] gi|51976963|gb|AAU18513.1| conserved hypothetical protein [Bacillus cereus E33L] Length = 337 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKKSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|301053487|ref|YP_003791698.1| membrane protein [Bacillus anthracis CI] gi|300375656|gb|ADK04560.1| hypothetical membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 337 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYFVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|228920656|ref|ZP_04084000.1| UPF0118 membrane protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839021|gb|EEM84318.1| UPF0118 membrane protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 337 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 121/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVDRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIVKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKMFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|218779980|ref|YP_002431298.1| hypothetical protein Dalk_2136 [Desulfatibacillum alkenivorans AK-01] gi|218761364|gb|ACL03830.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 365 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 42/360 (11%), Positives = 118/360 (32%), Gaps = 12/360 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + +PQ ++ +++ L+S+ +L PV +++I + + K Sbjct: 9 VDRYLSDPQMVVLVLMLITGLLSILYLGEMLMPVFVSIVIAYLLDGLVVRLQQFKIPRLA 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ + + + I+ +++L ++ + + ++ G + L +P Sbjct: 69 CVIIVFVLFLSAMVIL-VVWLLPQISKQIIQFLRQLPDMLSTGQ---KQLMHLP-----E 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + ++ + +FFF +D Sbjct: 120 KYPEFISKAQVDQIFEMGNSAAAAFAKRAVSLSVASVYTLVTLVVYLVLVPFLVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + V + + + G + + + + + Sbjct: 180 KEIIIGWMLRFRPSDMGLT-RSVWHDVNRQVSNYVRGKGWEILIIWGLSFAVFKFLDLNY 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRP 298 + L + T + + P G + F V + + + + + I D L P Sbjct: 239 TLLLSLFTGLSVIFPYIGVTVMFFPVGLIAFFQWGVEPKALWAVASYGFIQIFDGQILAP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + L + ++ G+ GLF L L+ V+ + + + + K S Sbjct: 299 LLLSEVVNLHPVAIIIAVLFFGGIWGVWGLFFAIPLATLVNVLLRIWLDKYEGSGRKGDS 358 >gi|296185784|ref|ZP_06854191.1| hypothetical protein CLCAR_1221 [Clostridium carboxidivorans P7] gi|296049612|gb|EFG89039.1| hypothetical protein CLCAR_1221 [Clostridium carboxidivorans P7] Length = 299 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 107/296 (36%), Gaps = 10/296 (3%) Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV--VLANQHGIP 105 ++ +KK S +++ + + ++ L F Y + E L + + N + I Sbjct: 1 MNNIFNKKGISKGISSLLTLIISLIAALLILYFFIRYALWEFNGLAKNIHNLSPNTNTIT 60 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 ++ I ++ S + + ++ I +++ I F I L + Sbjct: 61 SQNPINSIVSEIYKSININELIKIANNMMINYTQKFQSSLYKNINDIVDAFSKILLVLLI 120 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + +D + L + + + V K + + G ++A+ Sbjct: 121 LFFLL--------KDASKFKDKFIDLFPEKYKNFLSETLYNVDKALNAYVTGQLMVALSL 172 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +++ Y + G+P+ + + T I+ IP + + + I+ L + Sbjct: 173 AIMIYIGYKIIGMPNALIWALFTFILGFIPFIGFFISMIIPSIIAVSKGIYMIIKLSIVF 232 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + P ++ +K+ L F +V V G + FI L A++ VI Sbjct: 233 ITVQTLKGRVVVPLIMSSTLKIHPLTDIFLVVTAVSYGGPMAAFIIVPLYAMVKVI 288 >gi|229090936|ref|ZP_04222160.1| hypothetical protein bcere0021_17540 [Bacillus cereus Rock3-42] gi|228692337|gb|EEL46072.1| hypothetical protein bcere0021_17540 [Bacillus cereus Rock3-42] Length = 337 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 116/338 (34%), Gaps = 19/338 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + + E+ Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-PPDNEIIKYALSTINGMEVSKYI 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + + S F ++ + ++ F + Sbjct: 128 EQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIITFTF-------------KFKE 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ +R KVI + F +IA+ ++ A + G P + L V Sbjct: 175 SKLKVFYEEIAYFGERFARSFGKVIEAQF----LIAVVNCILTVIALIVLGFPQLLVLAV 230 Query: 247 ITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +IP G IS + I G + + ++ + + L P + Sbjct: 231 MIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMSAKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 291 NLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|261341969|ref|ZP_05969827.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] gi|288315879|gb|EFC54817.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] Length = 349 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 112/321 (34%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + F+ + +A+ V V Sbjct: 14 LLKLACLVVILAGIHAAADILVQLLLALFFAIVLNPLVTWFLRRGVSRP--VAITIVVIV 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + + L + + E ++ + + + + Sbjct: 72 MLIVLTALFGVLAASLSEFSTMLPQYNKELTRKLVD-----------------LQRMMPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L I E L+ + + +A+ SI+ +++ + F + + +L Sbjct: 115 INLHISPERMLRRMDSEKVMTYATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKL-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V + L + ++ G+++ L V + GV+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSKYLALKTLL-SLWTGVIVWLGLVLLDVQFALMWGVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA +S I + + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVLSAVPPMIQAFLFNGFYECMLVGALFLAVHMVLGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLVWGWLLGPVGMLL 313 >gi|291563789|emb|CBL42605.1| Predicted permease [butyrate-producing bacterium SS3/4] Length = 439 Score = 63.7 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 115/370 (31%), Gaps = 49/370 (13%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----------------------------- 50 + L ++ APV+ ++ F P+Y+ Sbjct: 36 VFAFLGKVRFVLAPVIYGAVLAFLMSPVYNRCYNTVVYVHDDDKKKEDEEKKIAPKKRFK 95 Query: 51 -------FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE-----MKELVSKVVL 98 + +I V + I+P L+ G++ + + + Sbjct: 96 SESFGNFLGKAIGTVISLAFLIVVVVSLSSMIIPQLYSSIVGIINMMPVYFQNVYDWLTE 155 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 + PV + + +I +++ + + L F I+ I S M Sbjct: 156 FFVNNPPVEQAILNI--YEQSAQYFQSWMET--DLMSNLSNFQNFQNIEKIVGGVSSGVM 211 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS----RIVPKVIRST 214 + +++ +I + + S+S Q + P I + + K Sbjct: 212 NVITLTKNMLIGLIVMIYLLNIKESLSAQGKKFIYSVLPLKAANIVVAEFQFIKKAFSGF 271 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 +G I ++ G++ L +P + + VI + +IP P A L+ + Sbjct: 272 IIGKLIDSLIIGILCFILMHLFKLPYELLISVIIGVTNVIPFFGPFIGAAPCAILVFLIS 331 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + L P ++G + F ++ G +G+ I L Sbjct: 332 PKQCLYFIGLILVLQQFDGNILGPKILGNSTGVSSFGVLFSILLFGGLCGFVGMIIAVPL 391 Query: 335 MALIAVIWKE 344 MA+I I+ + Sbjct: 392 MAVIIHIYNQ 401 >gi|316934067|ref|YP_004109049.1| hypothetical protein Rpdx1_2731 [Rhodopseudomonas palustris DX-1] gi|315601781|gb|ADU44316.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris DX-1] Length = 382 Score = 63.7 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 94/343 (27%), Gaps = 2/343 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +L + + G + + ++ G + + + + LF+ Sbjct: 29 FAALLYASWHFAGTLFLIFAGILFGVFLNALTELAGRVVGGPHGLRLALVCLVLSGLFVG 88 Query: 77 PLLFLFYYGMLEMKELVSKV--VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + K L + + N G + + + P + Sbjct: 89 VAFLGGNTISQQAKALSGTIKMQIVNVKGFLERNGVDTSFLDLGNVGSAAHPETAPSPPR 148 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L +G I + + + + ++ F L L Sbjct: 149 NLPTPGELASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPEVYRNGLVRLAPR 208 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A + + +++ L I I V L G+P LG+ ++A I Sbjct: 209 RHRAQAEIVVGKTGDMLKRWLLAQLITMIAVFAVTAIGLSLIGIPGAFILGIQAGLLAFI 268 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I V + I FL + L P + I +P F Sbjct: 269 PTVGAILGGLVIVLAAIASGWIAVLSAFLLFLGVHALESYILTPLIQRQAIDIPPATLFA 328 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + GL GL + LMA+ V+ ++ + + Sbjct: 329 TQILLGIVFGLWGLALALPLMAIGRVVLDHLRGEEPDDGDAPA 371 >gi|126464584|ref|YP_001045697.1| hypothetical protein Rsph17029_3845 [Rhodobacter sphaeroides ATCC 17029] gi|126106395|gb|ABN78925.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 406 Score = 63.7 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 103/322 (31%), Gaps = 15/322 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 YF + P++ L++ T P+ + + T + + Sbjct: 68 GFYFARDVVLPLMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAV------- 120 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 L + + A + G + I A ++ +S + + + Sbjct: 121 -SAFLLSGPVSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRVA 179 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA-YWK 201 + I ++++ + F G +L Sbjct: 180 VQTPGILSSAVGSVASILTTIIVTLVLAL----FLLASGDLFYIKLIEGFPRFGDKKRAL 235 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI- 260 +I + + + L +TII G G+V+G W G+PS + + ++ +P I Sbjct: 236 RIVYGIERRVSRYLLSVTIINAGLGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIA 295 Query: 261 -SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++ ++ ++ A + I + + P ++G ++L + F ++ Sbjct: 296 GVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFW 355 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + + I V+ Sbjct: 356 GWLWGIPGALVAVPFLVCIKVV 377 >gi|268316229|ref|YP_003289948.1| hypothetical protein Rmar_0662 [Rhodothermus marinus DSM 4252] gi|262333763|gb|ACY47560.1| protein of unknown function UPF0118 [Rhodothermus marinus DSM 4252] Length = 372 Score = 63.7 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 107/317 (33%), Gaps = 16/317 (5%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P+ ++ + L + L + ++ EL + L + Sbjct: 61 AYLLRPVVDRVQQ-LGLGRVPAILLTMSLLAGLISLVFTSLVPFLARQLAELSRLISLES 119 Query: 101 QHG--IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 G RWL + ++ L + F + Sbjct: 120 LQGAVTQFERWLMRF-----------FPIQPGTLMETLRQGFETLIRERQLASTIGSMLD 168 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +F + +++ + FF +DG + + L L + + + + + F + Sbjct: 169 LFANLFYAVLVIPFVTFFALKDGTRLRRSLLRLVPNRYFELTLAVLDKLGANVGRYFRAL 228 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFN 277 + ++ + L G+ VA+G+ T I IP G + F A ++ + + F+ Sbjct: 229 MLQSLSVATLASVLLALVGLRFAVAVGLFTGIANTIPYFGPLMGFLAGTLVGIAQTGDFS 288 Query: 278 ATCLFLWGAIELFIVDKTL-RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L I D L +P + + L F ++ G + G++G+ + ++ Sbjct: 289 MVPEVLVAMGLTQIADNVLFQPLIFSRAARAHPLIILFAVLVGAQLAGIVGMLLAIPILT 348 Query: 337 LIAVIWKESIMAIKENK 353 ++ V ++ ++ + Sbjct: 349 IVRVAVEQVRWGVRNYR 365 >gi|254418458|ref|ZP_05032182.1| conserved domain protein, putative [Brevundimonas sp. BAL3] gi|196184635|gb|EDX79611.1| conserved domain protein, putative [Brevundimonas sp. BAL3] Length = 389 Score = 63.7 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 94/326 (28%), Gaps = 19/326 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++Y+L+ P+ AL + + + ++ + + V A V V+ Sbjct: 40 AAVYWLRDILTPLAMALFLLIMIDGVKRTVAARTPLNDRWAGVAALVLVVLA----FFAS 95 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + +Q+ P + L++P + + L Sbjct: 96 IGIIVNGAAGFFGEASGVSQNIGPRIDQIIR-------DVYGMARLNNPPTAQELINGVD 148 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I A M+ F + + + Sbjct: 149 IRGYVASIAIQAQGIASGA------FFVMVYLGFLLASQIGFRRKIVTMFPQKRQRDEAI 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAP 259 + V + T+ +V G+ + + I+ IP GGA Sbjct: 203 AVFERVRGGVEGYIWVQTVTGAMICVVAWILMRAVGLQNAEFWTFVIFIVGFIPVLGGAV 262 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 L+ + + A L + LFIV ++P + G + + L Sbjct: 263 AGLAPPLFALVQFPSYWPALILLVGLQTILFIVGNMIQPRMQGDNQNIDPVVVLLSLAFW 322 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 + G++G+F+ L + I E Sbjct: 323 GKLWGVVGMFLSTPLAVMAMAILAEF 348 >gi|126649757|ref|ZP_01721993.1| hypothetical protein BB14905_16205 [Bacillus sp. B14905] gi|126593476|gb|EAZ87421.1| hypothetical protein BB14905_16205 [Bacillus sp. B14905] Length = 323 Score = 63.7 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 2/179 (1%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 I I L+ + +I+Q++ + I V + ++ + Sbjct: 133 LFDIFVYWIVLYMLLLELPTINQKILMPVPFHYHQKIVFIGERVKLALFGFLKAQLLVGL 192 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLF 282 G + +A++ P + L ++ ++ IP + I +IY + G+ A L Sbjct: 193 GIFALAIAAFYFLKTPFPLLLALLLVVLDFIPFLDSFILLVPWAIYQVFAGDYIYAAVLI 252 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + F+V + + P ++G I L L TF + G + G G+ IGP+L ++ + Sbjct: 253 VL-TVGQFLVRRMIEPKIIGDKIGLSSLSTFIAMFIGFKIFGFSGILIGPLLFVVVLSL 310 >gi|149375123|ref|ZP_01892895.1| predicted permease [Marinobacter algicola DG893] gi|149360487|gb|EDM48939.1| predicted permease [Marinobacter algicola DG893] Length = 359 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 3/216 (1%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ F+ + + ++ + I +FFF +D + + + P +I Sbjct: 145 TQWLVSFSLESIPDLVALLIYMVLLPILVFFFLKDRRVLLGAIARMLPSQRPM-MVRIWH 203 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTA 264 V + G + + G + A+ + G+P L ++ + +IP GA + Sbjct: 204 EVNLQCANYVRGKAVEILIVGGITYVAFKVLGMPYAALLSLMVGLSVVIPYIGAAVVTIP 263 Query: 265 VS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+ I L G + + + + L P L L + ++ Sbjct: 264 VAMIALFAFGWGSEFIWVMVVYGVIQALDGNVLVPILFSEVNNLHPVAIIVAVLFFGGIW 323 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL G+F L ++ I+ + + + + Sbjct: 324 GLWGVFFAIPLATMLKAIFSAWPVKNGQAEALPKES 359 >gi|229014603|ref|ZP_04171718.1| hypothetical protein bmyco0001_50040 [Bacillus mycoides DSM 2048] gi|228746680|gb|EEL96568.1| hypothetical protein bmyco0001_50040 [Bacillus mycoides DSM 2048] Length = 317 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 8/279 (2%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ Y ML ++ I + + + + ++ + Sbjct: 39 IIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHME 98 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + G+D + + + G L LS+I + FF + I E Sbjct: 99 LSKYVGQGVDILYKSITNVGKFGLQVLLSVILSL----FFLLEKARIVAFTSKFKESRLA 154 Query: 198 AYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ +I K RS +IAI ++ A W+ G P + L ++ ++ +I Sbjct: 155 IFYNEIEYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLI 214 Query: 255 PG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P G IS + + G I + + + + L P + LP TF Sbjct: 215 PVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLNPKFMSQKTNLPIFYTF 274 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +G+ GL IG + + + + ++++ Sbjct: 275 MILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 313 >gi|300113733|ref|YP_003760308.1| hypothetical protein Nwat_1046 [Nitrosococcus watsonii C-113] gi|299539670|gb|ADJ27987.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 380 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 116/341 (34%), Gaps = 10/341 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +L Y L+ F P+L A + P+ + + V+ + Sbjct: 31 LGIFLLWFGYQLRAIFIPLLIAFAFAYLFDPLIRWGERYCKMPRPATISLLLALVIMSSV 90 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +L + + EL+ +V Q + + + I E W +HL I Sbjct: 91 SLVAWLGPEFLKQFAELLRGLVDYLQT-LAIEYDIHLIKSLRAKLENWVQHLEENPVGFI 149 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T G S I+ + F +I +L Sbjct: 150 VENTETLLIGTTQAVTVVSHILGAAAYVGTMILLIPFYFFIIAWRFGAIMGKLKEFMPAK 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY--WLAGVPSHVALGVITAIMAM 253 I++ + + + + F G +IA+ + + +A VP + LGV I+ Sbjct: 210 EKDRILIIAKEMDEAVAAFFRGRLVIALVTAGLFSLGWSPLIADVPYWLVLGVSAGILNF 269 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNA---TCLFLWGAIELFIVDK----TLRPFLVGGPIK 306 IP + +++ A + + +W ++ IV L P++ G + Sbjct: 270 IPYLSTLAWLAAIFSKGLAIGFSGGFDLWLVIIWPSLAYGIVQFLDGWLLTPWIQGRSLN 329 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + ++ G GL GL + + A +++ E I+ Sbjct: 330 LGAITVVVVVLIGGTVGGLYGLLLCIPMAACAKILFTELIL 370 >gi|90407444|ref|ZP_01215628.1| permease PerM, putative [Psychromonas sp. CNPT3] gi|90311475|gb|EAS39576.1| permease PerM, putative [Psychromonas sp. CNPT3] Length = 353 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 115/343 (33%), Gaps = 16/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVI 65 +P + ++ + + ++YF G P+ AL++ + WP+ + + + S +I Sbjct: 15 DPHLGVLFVSLLGLFFTIYFFGGILTPLFVALVLSYLLDWPVMH--LMRLKISRGLATLI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWT 124 M + I + + + + L+ + + NQ I V S P + A+ L Sbjct: 73 VMSGFMSIMIFMFIAVVPTVIKQGISLLHDLPAMFNQSQIFVLTLPSRYPDLIDANTL-- 130 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L ++ +G + S + + I + + + F +D + Sbjct: 131 ------AGLMENLRNYVLESGGFLLSHSFSSL-LNLAALIIYAILVPLMMVFMLKDKNIL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +Q+ ++SR + I + G I I G + + V L Sbjct: 184 IKQMLRFLPT-HHKLIDQVSREMNMQIMNYIRGKVIEIIIVGFFTYLVFLFLDLRYSVLL 242 Query: 245 GVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+ +IP G ++ + L G L L I + + P L Sbjct: 243 AVLVGFSVLIPYIGAVVVTVPVAVVALFQWGLTPEFAYLMLAYGIVQALDGNLVVPILFA 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L+ + Sbjct: 303 DAVNLHPVMIIIAVLIFGGLWGFWGVFFAIPLATLVKALLNAF 345 >gi|52424483|ref|YP_087620.1| PerM protein [Mannheimia succiniciproducens MBEL55E] gi|52306535|gb|AAU37035.1| PerM protein [Mannheimia succiniciproducens MBEL55E] Length = 348 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 124/346 (35%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M +++ Q ++ + + IIL + P L +L I PI ++K Sbjct: 1 MNKSVSVNQFLIGFAALVIILAGIKMAGEIVVPFLMSLFIAIICSPIIKFMTNRKIPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ + L LL L + E + + + + + Sbjct: 59 WLAISILFLFIVLVFFFLLGLVNSSIREFSQSIPQY---------------RVLMSERLN 103 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+ L + ET L+ I F SR + F + + +I+ + F + Sbjct: 104 EITALIQKWNLPLNLEKETILEHFDPSSIMNFVSRLLLSFSNVLSNAFVLILVVIFMLLE 163 Query: 181 GFSISQQL---DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + +++ S E K + RI+ VI S T +++ GL G Sbjct: 164 APTAKRKVALALSGNEKDASKEEKHLERILQGVI-SYLGVKTAVSLLTGLCAWVLLETCG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V V +T + IP G+ I+ + + L+ + ++ L Sbjct: 223 VQYAVLWATLTFLFNYIPNIGSIIAAIPIVLQALLLNGFSTGFAVMTGIIAINMLIGNFL 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P L+G + L L F L+ +G +G+ + P+ MAL ++ Sbjct: 283 EPKLMGRTLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIML 328 >gi|172035116|ref|YP_001801617.1| hypothetical protein cce_0200 [Cyanothece sp. ATCC 51142] gi|171696570|gb|ACB49551.1| hypothetical protein cce_0200 [Cyanothece sp. ATCC 51142] Length = 357 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 1/215 (0%) Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S + L++ I+ + + + SL + K Sbjct: 143 SSQQLLIGVSGLTRGIVGGVLNVFLAILLSGYMLSGSQKLIDGIVSLFPTPWDQKLKDQV 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFT 263 V + + G +++ GL + G+ + LG I + +IP P+ + Sbjct: 203 IPVSQRMGGYIQGRLLVSFILGLAVSLGLKFLGIGEFALGLGTIAGMTNLIPFFGPVLGS 262 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + + L I + L P LVG + +P L ++ GV+ + Sbjct: 263 IPALIVAVAQGGWLFLWVLLLFVIIQNLETYVLDPLLVGSSVNVPPLYQLLAVLSGVQLL 322 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G I P +A V+ + + K EK +S Sbjct: 323 GIIGALILPPWVAGAGVLLQNLYLTPKLEAEKENS 357 >gi|291562535|emb|CBL41351.1| Predicted permease [butyrate-producing bacterium SS3/4] Length = 392 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 7/188 (3%) Query: 164 CLSIIFMIIALFFFY-----RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L + I LFF Y + + F + + + V+ + Sbjct: 201 ALRVAVAGIVLFFIYFVAVLLTLQEMDDIREKRSRSAFRREFLVVGERIASVVGAWLKTQ 260 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFN 277 I V + G P G I+ +P GA + LL + Sbjct: 261 AFILFLTSAVCIFGLAVIGNPYSFLFGCGIGILDALPVLGAGTVLIPWGVALLFQKAWKK 320 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 A +F + F+ + L+G + L L + + G++ GL GL +GPV + L Sbjct: 321 AAVIFGIYVVCYFL-RQISEARLMGKQVGLSPLGSLVSMYVGLKLFGLSGLILGPVGVLL 379 Query: 338 IAVIWKES 345 I + + Sbjct: 380 IGDLVRMY 387 >gi|260425662|ref|ZP_05779642.1| putative transporter permease [Citreicella sp. SE45] gi|260423602|gb|EEX16852.1| putative transporter permease [Citreicella sp. SE45] Length = 345 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 113/343 (32%), Gaps = 18/343 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M PQ ++ ++ L+ K PVL ALI + + + A+ Sbjct: 1 MNLPQITYLTALLIMLGYILHIGKPVILPVLIALIALYILSNVTDRL-GRVPVIGRLPAL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + V+ F V + F Y Q +P + S+I + + Sbjct: 60 LRRLIVLLAFTVLTVLSFAYLAD----------TFTQVAAALPGYESNIDALVLRAAHVF 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 P K+ S T + +I + ++ + + FF + + Sbjct: 110 GIEDQPTWAKVRSATIDRFQVQSYIGPVLLS----LRGFGGTLFLVTLYAFFMMAERAVM 165 Query: 185 SQQL-DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++L ++ G+ + + + T++ I GL+ + G+ + Sbjct: 166 ARKLANAFGDPERETRTIALFERINTRVGDYLSVKTVVNIILGLLSYGVLLIFGIDFALF 225 Query: 244 LGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ ++ IP + V + L G+ A+ + + + V L P ++ Sbjct: 226 WAILIGLLNYIPYIGSLIAVIFPVLLSLAQTGSYSAASMVAVGLTVAQMFVAGYLEPRMM 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L GL G + L A + ++ E Sbjct: 286 SRTFNLSPFVVLFALAFWGALWGLPGAVLAVPLTASMIIVLAE 328 >gi|157737199|ref|YP_001489882.1| putative permease [Arcobacter butzleri RM4018] gi|157699053|gb|ABV67213.1| putative permease [Arcobacter butzleri RM4018] Length = 361 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 104/288 (36%), Gaps = 22/288 (7%) Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +A+ ++ ++ F++ + M+E+ +VS++ I ++ I Sbjct: 66 NIIAIPLSLFIIIYFMIKVGAFITSSMIELSSIVSQLDSKINIVIEKISIMTSIDLKDPL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + F ++ ++ I S + L ++F++I FF + Sbjct: 126 EKFFQE--------------FNLSSALNKIFTAFSSIFSNLVQIFLYVLFLLIDQQFFNQ 171 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ + + I V K +R+ L TI+++ G + + Sbjct: 172 KLNAL------FSKEENRQKAEHILTSVSKGVRTYILITTIVSLVTGFLTFIICQYFSLQ 225 Query: 240 SHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + G I I+ IP I L+ + + LF I F+V + Sbjct: 226 GAILWGFIAFILNFIPTIGSIIAVLIPTIFALIQFTDYSDIVGLFTALVIIQFVVGNIIY 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P L+G + + LV G +G+F+ +M ++ +I + Sbjct: 286 PKLMGNKLNISQFVVILSLVIWGAMWGTIGMFLAVPIMMILLIILSQF 333 >gi|146283129|ref|YP_001173282.1| PerM family membrane protein [Pseudomonas stutzeri A1501] gi|145571334|gb|ABP80440.1| membrane protein, PerM family [Pseudomonas stutzeri A1501] Length = 276 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 67/186 (36%), Gaps = 3/186 (1%) Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + ++ + I +FFF +D IS + ++S+ + I + G I + Sbjct: 82 IYLVLVPILVFFFLKDREQISNWIKGYLPRERGL-ITQVSQEMNLQIANYIRGKAIEILI 140 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LF 282 +V + + G+ + ++ + ++P GA + +++ + + + + L Sbjct: 141 CAVVSYAVFASLGLNYAALMAMLVGVSVVVPYIGATVVTIPIALIGIFQWGLGDQFFYLM 200 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + AI + L P L + L + ++ G G+F L L + Sbjct: 201 VAYAIIQTLDGNVLVPLLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVL 260 Query: 343 KESIMA 348 Sbjct: 261 YAWPRE 266 >gi|229155534|ref|ZP_04283642.1| UPF0118 membrane protein [Bacillus cereus ATCC 4342] gi|228627852|gb|EEK84571.1| UPF0118 membrane protein [Bacillus cereus ATCC 4342] Length = 337 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 122/341 (35%), Gaps = 25/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 9 RSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLNVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I+ Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERITT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 E ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILMFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 288 AKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 328 >gi|228474247|ref|ZP_04058982.1| putative membrane protein [Staphylococcus hominis SK119] gi|314936782|ref|ZP_07844129.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] gi|228271606|gb|EEK12953.1| putative membrane protein [Staphylococcus hominis SK119] gi|313655401|gb|EFS19146.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] Length = 361 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 82/240 (34%), Gaps = 4/240 (1%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRD 180 + P + + +K+ A+ + +I + L + +D Sbjct: 120 LNQMDKLPSDVTAKINSAMKSISDSLTGILANSITYITSLISTIFLLIMVPFFLIYMLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + ++S G ++ G++L Y L G+P Sbjct: 180 HEKFIPAIGKFFKGERKVFVVDLLKDLNYTLKSYIQGQVTVSFILGIILYIGYSLIGLPY 239 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L + + +IP G +SF +I +I G + + I + + P Sbjct: 240 TPLLVLFAGVANLIPFLGPWLSFAPAAILGIIDG-PSTFIWVCVVTLIAQQLEGNVITPN 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++G + + L ++ G + I L A++ I + + +K +S+ Sbjct: 299 VMGKSLSIHPLTIIVVILAAGDLGGFTLILIAVPLYAVLKTIARNVFKYRQRIIDKANSD 358 >gi|154245176|ref|YP_001416134.1| hypothetical protein Xaut_1228 [Xanthobacter autotrophicus Py2] gi|154159261|gb|ABS66477.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 338 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 102/328 (31%), Gaps = 25/328 (7%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ +LY PV A+ + +P+ S + + LAV+AT+ + + Sbjct: 10 AILVFAALYVADTLIVPVAFAVFVIAVVYPLQSVLEKRLPK---LLAVLATLVITLAVVG 66 Query: 77 PLLFLFYYGMLEMKELV-SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +G + V WL G + LW +H Sbjct: 67 GVSSVVVWGFSHVATWVFQNTARFQVLYGQAATWLEG--HGFVLAGLWAEHFD------- 117 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ R ++F + + + + Q+ LG Sbjct: 118 ----------VRWLLRVFQDISGRLQGLASFLVFTFVYVLLGLLEVDAAKSQVLRLGRTG 167 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ T+++I G V+ AG+ +A G I M IP Sbjct: 168 RAPHLPAALADTAAKLQKYMAVRTLMSIATGAVVWVFTLTAGLELAIAWGAIAFAMNYIP 227 Query: 256 GGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P L + A +F + F+ L P L G + + Sbjct: 228 FIGPFVATLLPALFALAQFESWEMALFVFACLNVIQFLSGSYLEPRLAGKALAVSPFLVL 287 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G+ G FIG ++ + I Sbjct: 288 FSVFFWAFLWGIAGAFIGVPILIAVLTI 315 >gi|329904575|ref|ZP_08273875.1| hypothetical protein IMCC9480_2159 [Oxalobacteraceae bacterium IMCC9480] gi|327547902|gb|EGF32653.1| hypothetical protein IMCC9480_2159 [Oxalobacteraceae bacterium IMCC9480] Length = 354 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 122/330 (36%), Gaps = 13/330 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ L Y ++ V+ A+ + +P+ K TVS+ +F Sbjct: 16 LLVAFFLFVAYSVRSTLLVVVFAIFFSYLLYPLVGLIERFKPLRVPR-----TVSIAIVF 70 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I +L G L + + + +Q + P + A L ++ Sbjct: 71 IFAVLVFGAAGALFGSTITEEAMRLSQQLPTLLD-----PANISARIPLPGFLEAQRAQI 125 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI---IALFFFYRDGFSISQQLDSL 191 + T +G A R GM + ++I++I + F ++ + + S Sbjct: 126 LAFVTEQVQHGTGQALPMAQRLGMEVMHVATNLIYLILIPVLSFLLIKEAPLLRAEFLSS 185 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 W+ I + ++ + ++++ +V + GVP + L + ++ Sbjct: 186 LGAASAPLWRGILEDLDVLLSKYVRALLLLSMATFVVYSLVFSALGVPYSLLLAGVAGLL 245 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P+S + + + + L ++ D L P L+ +++ L Sbjct: 246 EVIPFVGPLSAVLIILCVSAFSGFPHLLWLLVFIIAYRMFQDYVLSPMLMSEGVEVSPLL 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 GL+ G G++G+F+ ++A I ++ Sbjct: 306 VIVGLLAGDELAGVIGIFLSVPVLAAIKIL 335 >gi|209963738|ref|YP_002296653.1| hypothetical protein RC1_0400 [Rhodospirillum centenum SW] gi|209957204|gb|ACI97840.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 391 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 102/342 (29%), Gaps = 9/342 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + +L+ + A++ + VI + Sbjct: 31 RRVLIALLLVGLAATLWLASHALLLLFGAILFAVAIRGLAGLLRRVLPVGEETSVVIVLL 90 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP------RWLSDIPGGMWASEL 122 ++ L + ++ +V + Q + L + GG+ + Sbjct: 91 ILLALAGGVGFLFGSQISQQFSKVAQQVPDSLQKLEDTLRSTGWGQQLLALTGGVPLTGD 150 Query: 123 WTKHLSHPQSLKILSETFLKTNGID---FIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + +G ++ R A + ++ ++ + Sbjct: 151 GGQGGGQGGGQGGAGAAPDGGSGGAGLGWLVRQAGSVAVAITGALGDLLLVLFGAVYLAF 210 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ L + + GM + + G + WL GVP Sbjct: 211 QPGLYRAGIEKLVPKDRTDQIVRALDATGGALWKWSAGMLVEMVLVGALTMVGLWLLGVP 270 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +ALG+I + IP PI +I L + A L+ + + P Sbjct: 271 APLALGLIAGTLEFIPIVGPILAAIPAILLAFTVSPDLALWTALFYVALQQVEGNLILPL 330 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + LP + + F L+ G +G+ + L + Sbjct: 331 IQRRAVALPPVVSLFALLVFGSLFGAIGVLLAVPLAVTAMTL 372 >gi|310659688|ref|YP_003937409.1| permease [Clostridium sticklandii DSM 519] gi|308826466|emb|CBH22504.1| Permease [Clostridium sticklandii] Length = 368 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 109/334 (32%), Gaps = 6/334 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L L +P A + P+ + + I+ + V LF+ L Sbjct: 34 LAILWAILSPFFWAFATAYILNPLMVALEKLDNRITRP---ISLIIVYILFVGILTLAIT 90 Query: 84 YGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +++++ + I W+S E + +L + + Sbjct: 91 IVTPVIVKNITEIIEKLPNYIDDTEKWISRQVLDYDLLEQLGINTYIFNNLDSIFNGAVD 150 Query: 143 TNGIDFIPRFASRFG--MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + AS G L ++ + L + I + L + Sbjct: 151 FLNLTLTGVVASIIGITSGVAKMLLGLVISVYLLADKEKFIRGIKKNLYAFMGREHADKT 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 V ++ + F+G I ++ G++ L V + L ++ I MIP P Sbjct: 211 IDFGNEVNRIFTNFFVGKLIDSMIIGILCFIGLSLLKVRFALLLSIVVGIFNMIPYFGPF 270 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 +I + + + A + L+ L P ++G + + ++ G Sbjct: 271 IGAVPAIVITLFYSPIQALWVTLFIFALQQFDGIILGPKILGDKVGVSPFYIILAIMIGG 330 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G ++ V W + ++ + + K Sbjct: 331 GFFGPMGMLMGVPVLKSFFVFWDKILVTLLKKKN 364 >gi|296447406|ref|ZP_06889332.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296255109|gb|EFH02210.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 360 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 1/197 (0%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 SR + + + ++ MI + + L L + ++ V + +R Sbjct: 140 SRLFSVSANVVVGLVVMIFGGIYLAAQPALYREGLSRLFPREWRGEVEETIDTVARALRL 199 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G I + G + G A WL G+PS +ALGV+ + +P PI +I + + Sbjct: 200 WLFGQLIEMVIIGAMSGVAVWLIGLPSALALGVVAGVAEFVPYLGPIVAAVPAILVAVTL 259 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG-LFIGP 332 + A F + + + P + + +P +V G++G +F P Sbjct: 260 SPATALWTFFAYVAIHQLEGQLVMPLIQRRMVFIPPAVMLLSIVAIGYAFGVVGAMFAAP 319 Query: 333 VLMALIAVIWKESIMAI 349 + + + ++ K + Sbjct: 320 LTVIIFVLVSKLYVRDA 336 >gi|68248943|ref|YP_248055.1| hypothetical protein NTHI0457 [Haemophilus influenzae 86-028NP] gi|145628691|ref|ZP_01784491.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae 22.1-21] gi|145638751|ref|ZP_01794360.1| hypothetical protein CGSHiII_08551 [Haemophilus influenzae PittII] gi|319775792|ref|YP_004138280.1| hypothetical protein HICON_11360 [Haemophilus influenzae F3047] gi|319896671|ref|YP_004134864.1| hypothetical protein HIBPF02880 [Haemophilus influenzae F3031] gi|329123634|ref|ZP_08252194.1| PerM family permease [Haemophilus aegyptius ATCC 11116] gi|68057142|gb|AAX87395.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP] gi|144979161|gb|EDJ88847.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae 22.1-21] gi|145272346|gb|EDK12254.1| hypothetical protein CGSHiII_08551 [Haemophilus influenzae PittII] gi|309750241|gb|ADO80225.1| Putative permease [Haemophilus influenzae R2866] gi|317432173|emb|CBY80524.1| conserved hypothetical protein [Haemophilus influenzae F3031] gi|317450383|emb|CBY86599.1| conserved hypothetical protein [Haemophilus influenzae F3047] gi|327469833|gb|EGF15298.1| PerM family permease [Haemophilus aegyptius ATCC 11116] Length = 348 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 122/346 (35%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E IP + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREF-----------TQSIPQYKVLLSQRVSDLTG 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I F + Sbjct: 108 LLQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVI----FMLAE 163 Query: 181 GFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ + + H + I R++ VI + ++ G+ + G Sbjct: 164 APTMKHKFAMVISSTPHDAAKEERHIDRVLQGVIGYLGIKSI-TSLLTGVGVFILLEACG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + ++ ++ IP G+ I+ + + L+ + + +V + Sbjct: 223 VQYAILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNII 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P ++G + L L F L+ +G +G+ + P+ MAL + Sbjct: 283 EPKMMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIAL 328 >gi|229087925|ref|ZP_04220036.1| hypothetical protein bcere0022_44800 [Bacillus cereus Rock3-44] gi|228695393|gb|EEL48267.1| hypothetical protein bcere0022_44800 [Bacillus cereus Rock3-44] Length = 342 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 2/143 (1%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IAI ++ A W+ G P + L ++ ++ +IP G Sbjct: 188 EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWVLGFPQLLGLALMIFLLGLIPVAGVI 247 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G+I + + A+ + L P + LP TF L+ Sbjct: 248 ISLVPLCMIAYNIGSITYVVYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFS 307 Query: 320 VRTMGLLGLFIG-PVLMALIAVI 341 +G+ GL IG PV M L+ V+ Sbjct: 308 EHFLGVWGLIIGIPVFMFLLDVL 330 >gi|325849467|ref|ZP_08170762.1| putative sporulation integral membrane protein YtvI [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480123|gb|EGC83197.1| putative sporulation integral membrane protein YtvI [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 386 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 114/321 (35%), Gaps = 5/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+I P ++ + ++ L + L++ + + ++ Sbjct: 36 MPIILALVIVGLLAPSIRKIDHILPIKHKAVSYLLGTILLLLLLFFLVWFVQFIVNQVSG 95 Query: 92 LVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTNGIDFI 149 LV ++ ++ V W++D+ + + + + L+ N I+ Sbjct: 96 LVGNIISNWDKIVSSVNTWINDVNSQINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINIT 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F + +I ++A + D ++ + L I + Sbjct: 156 FGFTQAFINTSNEIIFFVITFVVAFYIILGDMQNVYDKYHLLIPEKSKNNLSLIRAVFKN 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 + +A +++ + G + + +I + ++P G I SI Sbjct: 216 STWNYIKSQLKLAFLCTIIMAIFLFFIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSII 275 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LLI N + L + + + + P ++G + + + L G++ G++G Sbjct: 276 ELLIFDNTIKSLGLLIVLTAWTGL-RQVIAPKVIGSSADIHPILSVIALYAGLKLFGVMG 334 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + PV+ I I++ I+ Sbjct: 335 AILLPVVFIFIVGIYRSGIID 355 >gi|300173317|ref|YP_003772483.1| integral membrane protein [Leuconostoc gasicomitatum LMG 18811] gi|299887696|emb|CBL91664.1| Integral membrane protein [Leuconostoc gasicomitatum LMG 18811] Length = 332 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 111/341 (32%), Gaps = 27/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + R+ ++ +I+ + FLK F + +L +I + + + + S + Sbjct: 8 RHSQLYRYFVLAVIIALIVFLKQFMSLLLLTIIFSYLAINAGKRVSAVLKTSRAISIALV 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V+ L ++ + M ++K +++ + W + Sbjct: 68 YILVITLIVLAINHGTTTVMHQVKSMMALATDTS----------------------WDTN 105 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + N I + S ++ ++ F F + Sbjct: 106 GFLKEVYKNMHHYTNTLNTDQLISKGISHLNQ-VGHVLYELVLALLFSFIFSMTYPQLRA 164 Query: 187 QLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ + ++ F +I + V+ + P + Sbjct: 165 WSLHFLHSPYHKFFGEFYIIIHRFIIILGRLFEVQLMICVINTAVMVAVLAFLQFPYLLG 224 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I+ +IP G IS ++I I GN + + A F+ L P + Sbjct: 225 FAILIFILGLIPVFGVIISLVPLTITAFIIGNWHTVLIILVAVACVHFLESYFLHPHFMS 284 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P L L+ + G+ GL +G ++ + ++ Sbjct: 285 QRTHMPILVILLNLIIMEKLFGVWGLVVGLPILTFLLDFFR 325 >gi|302538382|ref|ZP_07290724.1| predicted protein [Streptomyces sp. C] gi|302447277|gb|EFL19093.1| predicted protein [Streptomyces sp. C] Length = 369 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 95/308 (30%), Gaps = 19/308 (6%) Query: 13 RWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +++ + + +++ L G F + L++ P + + V Sbjct: 17 RLLVVGVAVYAVFSLLGRFHEIGVALFLGLVVTALLSPPTRGLARILP--RSAAVAVTLV 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + L + E LV + + + +WL P + L Sbjct: 75 GSTVLLLGILALVGEAVAGESATLVREFREG---LVSIEKWLERPPFRLDPGAL------ 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ +L T+ + S G + + + + FF G Sbjct: 126 --TGLQAKIGEYLSTHRSTLLSTAVSGAGH-VVQVLTVLALAVFSSVFFLHGGGRQWAWF 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + G+ ++A +++G A + GVP V L ++ Sbjct: 183 CAQLPERARGRTALAGTAAWRTFTGYTHGIVLVAGTNAVLVGVALYFLGVPLAVPLALLE 242 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +P G+P++ ++ L A + + I L P ++ ++L Sbjct: 243 FFAAFVPLVGSPVALAVAAVVALAARGPVIAAVVIALIVVIGQIEGHLLHPLVMSWAVRL 302 Query: 308 PFLPTFFG 315 L Sbjct: 303 HPLVVAVS 310 >gi|226954495|ref|ZP_03824959.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] gi|226834766|gb|EEH67149.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] Length = 358 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 107/335 (31%), Gaps = 20/335 (5%) Query: 16 IMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I+ +++ + LK GF P+L A I + + + ST + ++ Sbjct: 19 ILLFLILFGWLLKIGQGFLLPILVATIAMYILITLSHWLVKFPVLKSTPEWFRRILVLIS 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 +V M+++ LV + + +P + ++I + P Sbjct: 79 FIVV---------MVQLISLV--ITTGQKILAKMPIYEANIEQVFLHVNAYLGWSDSPDW 127 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + N I + F + + + I++ + F + ++L Sbjct: 128 QIFREMLMSQINLQSLITSTLTSFSALTGMFVVIIVYAL----FLLNERDQFVKKLMIAF 183 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + K I + T+I + + W GV + +I + Sbjct: 184 PDGKTEQTRLLITDINKKISEYLVVKTLINLILATICFVILWACGVEYALFWALIIGLFN 243 Query: 253 MIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + V + L G++ + + + V L P ++G I L Sbjct: 244 YIPYVGSLFGVIFPVLMTLAQTGSLKLTILVAILLTVAQMFVGNFLEPRMIGKQINLSPF 303 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L G+ G + L ++ ++ + Sbjct: 304 VVLLSLSLWSSLWGIAGAILAIPLTSIFVIVLEAF 338 >gi|115467678|ref|NP_001057438.1| Os06g0297700 [Oryza sativa Japonica Group] gi|53791981|dbj|BAD54434.1| unknown protein [Oryza sativa Japonica Group] gi|113595478|dbj|BAF19352.1| Os06g0297700 [Oryza sativa Japonica Group] Length = 648 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 9/203 (4%) Query: 160 FLDYCLSIIFMIIALFFFY-RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L++ ++ + L++ +G ++Q+ L L + ++ I S L Sbjct: 451 VLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLP-LSKQVKDRCVEVIDHAISSVLLAT 509 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFN 277 IAI +G + + L V V I A++P P +S + LL++G Sbjct: 510 AKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAGQLLMEGRYVL 569 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLGLFIGPVLM 335 A + + I + ++ + G T ++GG+ L G +GP++M Sbjct: 570 AIVVTVVHLIIMDYGTTVIQEDIPGYNG----YLTGLSIIGGMALFPNALEGAILGPLIM 625 Query: 336 ALIAVIWKESIMAIKENKEKISS 358 ++ + + + E+ SS Sbjct: 626 TVVMALKNLYTEFVLADSEETSS 648 >gi|91977182|ref|YP_569841.1| hypothetical protein RPD_2711 [Rhodopseudomonas palustris BisB5] gi|91683638|gb|ABE39940.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 395 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 94/349 (26%), Gaps = 10/349 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L + + G + + ++ G + + + Sbjct: 34 ISTVAFGALLYAAWHFAGTLFLIFAGILFGVFLNALTELAGKVVGGPHGLRLGLVCFLLT 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+ + + L + + V +L EL + P Sbjct: 94 AMFVGIAVLGGSTIGQQATALSGTIKTQIVN---VKTFLERQGVDTSFMELSLANAGGPT 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL-------SIIFMIIALFFFYRDGFSI 184 + + L L + ++ F Sbjct: 151 AETQAPPQPRNLPSAGELASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPDVY 210 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L+ + + +I ++++ L I V + + G+P L Sbjct: 211 RRGLERVAPLRYRPQASRIVNDTGEMLKRWLLAQLITMTAVFAVTATGLSMIGIPGAFIL 270 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+ ++A IP I + + I F C F + L P + Sbjct: 271 GIQAGLLAFIPTVGAILGGLIIVLAAIASGWFAVLCAFALFLGVHALESYILTPLIQRQA 330 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I +P F + GL GL + LMA+ V+ N+ Sbjct: 331 IDIPPATLFAMQILLGIVFGLWGLAMALPLMAIGKVVINHLRAEGPANE 379 >gi|254517117|ref|ZP_05129175.1| permease, PerM family [gamma proteobacterium NOR5-3] gi|219674622|gb|EED30990.1| permease, PerM family [gamma proteobacterium NOR5-3] Length = 358 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 111/317 (35%), Gaps = 12/317 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 AP+L+++++ + + + + + IA + M F LL L + Sbjct: 39 LAPLLASIVLAYLVQGVVN-LLCRLGLPPWLGFFIAFTAFMGAFFAVLLGLLPLVWRQSI 97 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+++V G + L +++ + L Q + T + IP Sbjct: 98 GLITEVPRMIDQGRDLLEVLPGRYPEVFSQSQIDQMLGGIQGEIAGLGQKVVTMTLARIP 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F+ + ++ + I +FF +D I++ L P +I + Sbjct: 158 --------GFMTLLVYVVLVPIIVFFLLKDRAQITRWLAGFLPESRPLL-NRIWAEMNVQ 208 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + G + I G V ++ G+ LG++ + +IP GA I V+ Sbjct: 209 FSNYARGKMVEIIIVGAVSYVSFTGLGLRYAALLGLLVGLSVIIPYIGAFIVTVPVAAVG 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + + L + + ++D L P L + L + ++ GL G+ Sbjct: 269 LFQWGLTPEFYWVLAVYVVIQMLDGNVLVPLLFSEAVNLHPVAIIVAVLFFGGIWGLWGV 328 Query: 329 FIGPVLMALIAVIWKES 345 F L LI + Sbjct: 329 FFAIPLATLIKAVINAW 345 >gi|330428770|gb|AEC20104.1| hypothetical protein PT7_1564 [Pusillimonas sp. T7-7] Length = 396 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 108/330 (32%), Gaps = 18/330 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++ +L + K FF P++ ++I FT P+ S + ++AT VM Sbjct: 45 ILATVALVFALQWAKAFFIPLVLGILIAFTLNPLVSWLERMRLPR-----IVATSLVMLA 99 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + E ++ ++ +A + +++ G + ++ Sbjct: 100 LLGSSGMVAVSVYNEADAIMDELPVATYKLANAFKRINNGELGTLDKLRSAANTLKEAAI 159 Query: 134 KILSETFLKTNGIDFIPRFASRF---------GMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ET + + + ++ FF G + Sbjct: 160 PAAPETQASEKPAAPAVPAVPDLNLNDLLWTGSLNAAAFLGQMSMVLFLAFFALSSGNTF 219 Query: 185 SQQLDSLGEHLFPAYW--KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L L +I + ++ L + + + GL+ + + L G+ + Sbjct: 220 KRKLVKLTGPSISRKKITVQILDDINSSVQKYMLMLLVTNVLLGLISWAVWHLIGLENPG 279 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFL 300 A V A++ +IP + AV+ + + + V + ++ Sbjct: 280 AWAVAGALLHIIPYFGSLLAAAVTGFAAFMQFDSFSMMLLVAAITLGIASFVGMLVATWM 339 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G K+ F L+ G G+ G+ + Sbjct: 340 TGRIAKMNPAAVFVALLFGAWLWGVWGMLL 369 >gi|299538077|ref|ZP_07051362.1| hypothetical protein BFZC1_18760 [Lysinibacillus fusiformis ZC1] gi|298726279|gb|EFI66869.1| hypothetical protein BFZC1_18760 [Lysinibacillus fusiformis ZC1] Length = 350 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 125/340 (36%), Gaps = 22/340 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G R++I+ I ++LY ++ +L II + + + + + Sbjct: 6 RSNGFKRFIILVGIALALYLMRSMINLILLTFIITYLMNQLTTKTTKSIRKYTPMNEKAV 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV++ L + ++ + + + Q + ++ +E+ Sbjct: 66 TVTLYLLLVAGIVAVI----------YKYLPIVTQQITQLFDLIASFNLDPDDNEI--AR 113 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P KI +L G+D + + G I + +S+I + L + I + Sbjct: 114 YLAPTFEKIELGKYL-EQGVDLTLKNITNIGKIIMQILISLILSLFIL----LEKNRIIE 168 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ IRS IIA ++ A + G P +A Sbjct: 169 FTAKFKDSKIGPLYDELHYFSRIFIRSFGKVIEAQFIIAAVNCVLSVIALSIMGFPHLIA 228 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++ I+ ++P G IS +SI G + + + + I L P L+ Sbjct: 229 LGIMLFILGLVPVAGVIISLIPLSIIAYSIGGLMYIVYILVIVMVLHAIEAYFLNPKLMS 288 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 LP TF ++ +G+ GL IG P+ M L+ ++ Sbjct: 289 AKTDLPIFYTFMVILFSEHFLGVWGLIIGIPLFMFLLDIL 328 >gi|166366520|ref|YP_001658793.1| hypothetical protein MAE_37790 [Microcystis aeruginosa NIES-843] gi|166088893|dbj|BAG03601.1| UPF0118 membrane protein [Microcystis aeruginosa NIES-843] Length = 186 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 4/165 (2%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG + + L AY ++ ++ + G ++ + + ++ L Sbjct: 1 MLIDGDKLWRSFLQLLPI---AYRERFAKSFRQSFLGFIRGQLLLMLFLSVTSFLSFSLL 57 Query: 237 GVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+ + L I ++ IPG GA + V+I + A F+ + + I D Sbjct: 58 GIKYGLILASILGVIDAIPGVGATLGILLVTILTFTSQGLAIAVKAFIVCVVLVQIQDNI 117 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 LRP ++G ++L + F L G R GLLG+F+ + +IA+ Sbjct: 118 LRPKVMGNALELNPVILFLSLFIGERVAGLLGIFLSIPIAGMIAI 162 >gi|167648743|ref|YP_001686406.1| hypothetical protein Caul_4788 [Caulobacter sp. K31] gi|167351173|gb|ABZ73908.1| protein of unknown function UPF0118 [Caulobacter sp. K31] Length = 373 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 100/333 (30%), Gaps = 26/333 (7%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + +LY+++G P+ A+ + + + LA+ + + Sbjct: 15 FLAVVAGGAALYWMRGILTPLAMAVFLAVMIDSFARVLVLRVPRFPRSLALPTAIVLSIG 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +++ + I L + +L + Sbjct: 75 MFAAAVWVVTSNGAGFVGQIRDYAPRLNEVIAKIASLVGVKVAPTIGDLINQLNP----- 129 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +A ++ S I ++I L F ++++ +L Sbjct: 130 ----------------SAYAGAAAQSLQNFASSAILVLIYLGFIIASRRGFNRKIVALYP 173 Query: 194 HLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 H ++ + + + T+ + + L + + + + + A Sbjct: 174 HHAERDGAMQLFQRIRNGVEQYLWIQTVTGLMIAIAAFVVMMLLRLDNALFWAFLIFVAA 233 Query: 253 MIPGGAPIS---FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP + + + + A LF + F+V + P + G + + Sbjct: 234 YIPIIGGAIGCILPPLFALVQFPDSFWPALILFAALELIFFVVGNVIYPRMQGDSLNIDP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L G+ G+F+ P+ +AL+ ++ Sbjct: 294 TVVLLSLAVWGALWGVTGMFLSTPLTVALMLIM 326 >gi|39937281|ref|NP_949557.1| hypothetical protein RPA4221 [Rhodopseudomonas palustris CGA009] gi|39651139|emb|CAE29662.1| putative permease [Rhodopseudomonas palustris CGA009] Length = 371 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 121/316 (38%), Gaps = 19/316 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K FF P+++A ++G P S + + +I T+ + + ++ L ++ Sbjct: 57 KPFFLPMVTAFVVGTMVSPAASFLERFRIPRAVSAVLIVTLGLGTVIF--MIGLISAPLI 114 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E + ++ + + V ++W + S + L + ++ ID Sbjct: 115 EWSSRIPEIGSLLRDKLHVLD---------RPLQMWRQIQSSLSGSESLPQPSVQMPKID 165 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ F S L L + M++ ++D + + +I + Sbjct: 166 WVFEFLSP----TLTEVLLFLVMLVLFVAGWKDLRR--SLVMNFAGREARLRTLRILNEI 219 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVS 266 + + L +T+I + G G AG+P+ LG + A++ IP G + F ++ Sbjct: 220 EGSLGAYLLTVTVINLCYGAATGLLCAAAGMPNPAGLGALAAVLNFIPIIGPFVMFVIMT 279 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + +I A L +G + L + + P ++G + L L F L G Sbjct: 280 VVGIISMPTLGAGLLAPFGFVLLTFFEGHFITPTIIGRRLSLNTLAVFITLAFWTWLWGP 339 Query: 326 LGLFIGPVLMALIAVI 341 +G F+ L+ + V+ Sbjct: 340 MGSFLASPLLIVGLVL 355 >gi|113953062|ref|YP_731825.1| hypothetical protein sync_2637 [Synechococcus sp. CC9311] gi|113880413|gb|ABI45371.1| putative membrane protein [Synechococcus sp. CC9311] Length = 360 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 105/298 (35%), Gaps = 17/298 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L+A +I F I S ++ + + + + ++ + L + Sbjct: 31 LAPFPGLFLTAALIAFLLS-IPSRWLRARGLPDWLAISLVFFVAVGILVISGITLVPLLI 89 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG- 145 ++ +L++ +P WL G + + W P LS L Sbjct: 90 DQLAQLIN----------ALPGWLEASQGLIARLQGWAMAHGLPSEFGDLSSDVLTRASR 139 Query: 146 -IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L ++ + +++ FF G SIS L + + Sbjct: 140 LASQLSQQLLSILGATLGTTINTVIVLVLAVFFLLGGDSISAGLVRWLPQEWRQL---VV 196 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + R F G ++A+ + + L +P V V+ + +IP + + A Sbjct: 197 TTITRTFRGYFAGQVVLALILSAGQIAVFTLLKIPYGVLFAVLIGLTTLIPYASAFTVVA 256 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 VS+ L ++ ++ + IVD+ ++P L+G + L L G R Sbjct: 257 VSVLLAVQ-DLGMGVAILAAAIGVGQIVDQVIQPRLMGSIVGLQPAWLLIALPLGARA 313 >gi|241895774|ref|ZP_04783070.1| permease [Weissella paramesenteroides ATCC 33313] gi|241870817|gb|EER74568.1| permease [Weissella paramesenteroides ATCC 33313] Length = 346 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 122/333 (36%), Gaps = 17/333 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + IL+ LY ++ + VL I + + I S + F +I + Sbjct: 13 VQKLIALIFILIVLYIIRDLISIVLLTTIFSYLAVKIASKINRWTKIPYGFSVLIFFIVS 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F++ F+ + + + +V+ ++ + ++L+D + TK+ Sbjct: 73 IIIFVMAFTFIVPTLVKQFAVIPDEVMKVVKNSPDIKKYLNDTYQNLDLLNEITKNWKS- 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L +G D + S + L LS IF I ++ Q Sbjct: 132 ----------LLESGWDTLNVIGSVLSKVLLSIFLSFIFAIS-----WQRLRIFGTQFIH 176 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F ++ ++ S IIA +++ VPS + + ++ I Sbjct: 177 SNYPKFFTNVYDLTSTFVLILGSVIEVQMIIAFINTILMVIGLSFLKVPSILVMALLIFI 236 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP G +S +S+ +++ A+ L P L+ +LP Sbjct: 237 LGLIPIAGVLLSLIPLSVISFAALGWTGMIEVWILVAVIHLFESYFLHPRLMATRTELPI 296 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF ++ +G GL IG ++A I + Sbjct: 297 FLTFATIIVMEHLLGAWGLIIGVPIVAFILNLL 329 >gi|239993129|ref|ZP_04713653.1| transport protein [Alteromonas macleodii ATCC 27126] Length = 386 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 118/357 (33%), Gaps = 29/357 (8%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ +++F ++ +LY K P+ + + P+ +F K T A Sbjct: 24 QQTRLLNILVIFAVIYTLYLAKSLLVPLFFSAFVALLLSPL-VAFARKLFIPRTLSAG-- 80 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKV-----------------VLANQHGIPVPRW 109 +++ L + P FL + + + + A P Sbjct: 81 --ALIVLLVAPFTFLGIELAEPAERWMQSLPKIAAEISKEIEEISSNIDAYATPPAEPVE 138 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + + + LS PQ +K +GID ++ Sbjct: 139 KERSFFSWFGDDEKSPELSPPQDNTNSVTDKIKQSGID----IGLTLFGNAPFLLAQVLA 194 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLV 228 I+ +FF G ++ + + + + + S + ++II GL Sbjct: 195 CIVLIFFLLVFGPNLFNVFVRDFPIVTNKRRTLVLVDQIQRELSSYIVTISIINSCLGLA 254 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ G+ + G + A+M +P GG + + L+ G +A Sbjct: 255 TAGVFYYLGIDDALLWGALVALMNFVPYLGGVASCVVLLVVGLVQFGLTSSAFLPAGLFL 314 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + I + + P ++G ++L L + G++G+ + ++ +I + Sbjct: 315 VLNIIESQLITPAVLGRSMQLNPLIIIIWIAITGWLWGVVGVLLAVPILMCFKIILE 371 >gi|254422152|ref|ZP_05035870.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196189641|gb|EDX84605.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 359 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 104/326 (31%), Gaps = 15/326 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ +A+ + + S + K+ + F V+ V++ + + Sbjct: 20 WSIRFVVLLAFTAITLATVLNRVVRSLVGKRLKR-NFAIVLTLVALAFVLTAIFAVVAPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLK 142 + ++ + A V W++ I + SE + + Q + +++ + Sbjct: 79 FVDQVN---QWLDQAPLEVAQVSLWINRIDDRIPVELSEQLQRLDTFIQDIPMIARS--- 132 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A F L + + +++ + + S+ + + Sbjct: 133 ------VFNNAFLFFRGTLAILFNALLVLVITIMLLVNPKAYRNVFVSIFPQFYRYRVIE 186 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + + G+ + ++ S + GVP + + ++ IP P+ Sbjct: 187 ILDHCERSLVGWGAGILFNIVVITVLSFSGLAILGVPLPIGNAFLAGLLTFIPNIGPVLS 246 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + + + I L P ++ + L + Sbjct: 247 VVPPAVLGLLEAPWKGAAVVGLYILIQQIESNLLTPMVMKRQVSLLPAIALTSQLVCGVL 306 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMA 348 G +GLF+ L + V +E ++ Sbjct: 307 FGFIGLFLALPLTVVAQVWLQELVVK 332 >gi|104783049|ref|YP_609547.1| PerM family permease [Pseudomonas entomophila L48] gi|95112036|emb|CAK16763.1| putative permease (PerM family) [Pseudomonas entomophila L48] Length = 356 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 123/350 (35%), Gaps = 18/350 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++F+ + L G APVL+ +++ F + ++ K S Sbjct: 9 MQRYFSDEEAVVLAVLLFLAFTVVLTLGGMLAPVLAGMVLAFLMQGLVNALERLKVPSRL 68 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ T+ + L + +L L ++ L +++ P L + Sbjct: 69 AVWLVFTLFMGALAVF-MLVLVPLLWHQLITLFNEL----------PGMLGKWQSLLLLL 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 HL + + E+ G + F+ + ++ + ++ + I +FFF Sbjct: 118 PERYPHLVSDEQVLRAIESVRGEIGKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFL 177 Query: 179 RDGFSISQQLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 +D I + + L +++R + IR + + I I + S Sbjct: 178 KDRELIGRWVSGYLPRQRTLLNRVGDEMNRQIANYIRGKGIEILICGIATYIAFISLGLN 237 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + +G+ + + + T ++++ G+ F L AI + Sbjct: 238 YAALLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQF--IYLMAVYAIIQALDGNV 295 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P L + L + ++ G G+F L L + Sbjct: 296 LVPLLFSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 345 >gi|218247316|ref|YP_002372687.1| hypothetical protein PCC8801_2523 [Cyanothece sp. PCC 8801] gi|257061349|ref|YP_003139237.1| hypothetical protein Cyan8802_3583 [Cyanothece sp. PCC 8802] gi|218167794|gb|ACK66531.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] gi|256591515|gb|ACV02402.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 360 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 92/255 (36%), Gaps = 16/255 (6%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF-------LKTNGIDFIPRFASRFGM 158 +P+W+ + A + W ++P L + F LK+ G F+ G Sbjct: 102 LPQWIESGNQQINALKEWAITENYPFDLASIITQFAEKLSLILKSLGNQFLSLIGGTLGT 161 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 IF + ++ + + L G SI+Q + S + +I + K S F Sbjct: 162 IFNSLLVLVLTVFLVLT-----GNSITQGIFSWIPR---PWNTRIQESLRKTFESYFATQ 213 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 I+A + + VP V GV + +IP + I+ VS+ L+ + N Sbjct: 214 AILAGILSIAQTIVFLFLQVPYAVLFGVTIGVTTLIPYASAITIIIVSVLLIFQ-NFQLG 272 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I I D + P L+G L + L G + G+LGL I L ++I Sbjct: 273 ITALFLTIIVGQINDNVISPRLMGDMTGLNPVWIVVALFIGGKFAGVLGLIIAVPLASVI 332 Query: 339 AVIWKESIMAIKENK 353 N Sbjct: 333 KTTVDMVRYPPDSNH 347 >gi|229099866|ref|ZP_04230790.1| hypothetical protein bcere0020_50840 [Bacillus cereus Rock3-29] gi|229118928|ref|ZP_04248275.1| hypothetical protein bcere0017_51920 [Bacillus cereus Rock1-3] gi|228664584|gb|EEL20079.1| hypothetical protein bcere0017_51920 [Bacillus cereus Rock1-3] gi|228683612|gb|EEL37566.1| hypothetical protein bcere0020_50840 [Bacillus cereus Rock3-29] Length = 274 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 69/168 (41%), Gaps = 5/168 (2%) Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ H + KK +R KVI + F +IA+ ++ A W+ G P + L ++ Sbjct: 107 LAIFYHEIEYFGKKFARSFGKVIEAQF----LIAVVNCVLSVIALWILGFPQLLGLALMI 162 Query: 249 AIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +IP G IS + + G I + + + + L P + L Sbjct: 163 FLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILIIVTVIHALESYVLNPKFMSQKTNL 222 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P TF L+ +G+ GL IG + + + + ++ + EK Sbjct: 223 PIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMERDIEK 270 >gi|300362643|ref|ZP_07058819.1| integral membrane protein [Lactobacillus gasseri JV-V03] gi|300353634|gb|EFJ69506.1| integral membrane protein [Lactobacillus gasseri JV-V03] Length = 349 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 121/357 (33%), Gaps = 27/357 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-F 61 E + R + +I++ LY + +L I + + K + Sbjct: 6 EKFKKNTNVHRLATLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKLPNLPSQV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+A + V+ + + + ++ ++ ++ Q W ++ Sbjct: 66 IVVLAYLLVIAIIYFAITIYVPILIKQIVKMSHSLMKFYQSD-----------NMDWLTQ 114 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++S + +G+ + + G + + + +S+I FF+ + Sbjct: 115 YLNHYISDSEITTQ------AKHGVTILVHALTNVGTLTIAFFMSLIMS----FFYTIEL 164 Query: 182 FSISQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 S+++ L+S IA+ + + Sbjct: 165 DSMNEFSYTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMK 224 Query: 238 VPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P +ALG++ I+++IP G IS +S G I +F+ I I L Sbjct: 225 MPQIIALGLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRYVIYIFIVIMIIHAIEAYIL 284 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P + +LP TF L+ G +G GL +G + + I + K+ K Sbjct: 285 NPKFMSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDILGVKSVKTKKPK 341 >gi|75908912|ref|YP_323208.1| hypothetical protein Ava_2700 [Anabaena variabilis ATCC 29413] gi|75702637|gb|ABA22313.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 373 Score = 63.3 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 119/330 (36%), Gaps = 19/330 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS-WPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++L + + + V +A+++ F +PI F ++ + + + + Sbjct: 26 LLLQVVQYFQPLVNVVAAAILLAFVLNYPIQ--FFQERGVKRNLAIGSVLLLAVVILVGL 83 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + ++ ELV+ + P W+ + A + W P +L L Sbjct: 84 GVTLVPLIIEQLNELVNIL----------PYWIDSGGQQIDAFQKWAATQQLPVNLSGLV 133 Query: 138 ETFLKTNGIDFIPRFASRFGMIF--LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L+ G F + ++++ ++ + +G + L Sbjct: 134 TQILERVSSQLQSVTGRILGFAFDTIGVVVNVLLTVVLTIYMVLNGDRLWDGLYQWFPTH 193 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ +I+ + + F+G + GL + A+ VP + G+ + ++ P Sbjct: 194 IG---SKVRQILREDFHNYFIGQATLGAILGLTITLAFVTLRVPLALLFGLAIGLFSLFP 250 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G I + VS+ + ++ L + AI+ + P ++G L + Sbjct: 251 FGTGIGISIVSLLVALQNFWLGGEVLGVAVAIDQVNS-NFIAPRILGNLTGLNPVWVVIS 309 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ G + G+LGL I + I I Sbjct: 310 LLLGAKLGGVLGLLIAIPTASFIKDIADSW 339 >gi|294651524|ref|ZP_06728834.1| hypothetical protein HMP0015_3043 [Acinetobacter haemolyticus ATCC 19194] gi|292822588|gb|EFF81481.1| hypothetical protein HMP0015_3043 [Acinetobacter haemolyticus ATCC 19194] Length = 358 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 108/335 (32%), Gaps = 20/335 (5%) Query: 16 IMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I+ +++ + LK GF P+L A I + + + ST + ++ Sbjct: 19 ILLFLILFGWLLKIGQGFLLPILVATIAMYILITLSHWLVKFPVLKSTPEWFRRILVLIS 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 +V M+++ LV + + +P + ++I + P Sbjct: 79 FIVV---------MVQLISLV--ITTGQKILAKMPIYEANIEQVFLHVNAYLGWSDSPDW 127 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + N I + F + + + I++ + F + ++L Sbjct: 128 QIFREMLMSQINLQSLITSTLTSFSALTGMFVVIIVYAL----FLLNERDQFVKKLMIAF 183 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + K I + T+I + + W GV + +I + Sbjct: 184 PDGKTEQTRLLIADINKKISEYLVVKTLINLILATICFVILWACGVEYALFWALIIGLFN 243 Query: 253 MIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + V + L G++ + + A+ V L P ++G I L Sbjct: 244 YIPYVGSLFGVIFPVLMTLAQTGSLKLTILVAILLAVAQMFVGNFLEPRMIGKQINLSPF 303 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L G+ G + L ++ ++ + Sbjct: 304 VVLLSLSLWSSLWGIAGAILAIPLTSIFVIVLEAF 338 >gi|148657814|ref|YP_001278019.1| hypothetical protein RoseRS_3715 [Roseiflexus sp. RS-1] gi|148569924|gb|ABQ92069.1| protein of unknown function UPF0118 [Roseiflexus sp. RS-1] Length = 412 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 111/357 (31%), Gaps = 32/357 (8%) Query: 10 GIMRWMIMFIILVSLY--------FLKGFFAPVLSALIIGFTSWPIYSSFISK------- 54 + W+++ V L+ F A +I P+ S + Sbjct: 8 TVALWLLIICAAVFLFERAVVVVSFFATPLLLFALAWLIAVVLQPLVSRLTALDLPPITI 67 Query: 55 ---------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + S + +++ IV +L ++ L V + Sbjct: 68 RARRVPPPPRHLSRMLSVALIYLALFAALIVVILSFVPAITQQLTTLTGSVPTTVES--- 124 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + RW+ + + + Q I + T + + + Sbjct: 125 IARWIGRLDESLERFGFRGDLTAIVQPEAIAQQL---TGFGSAMLQQSLGIAGSIATVLF 181 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 +I ++I F+ DG + + ++ + + ++ +V + ++ Sbjct: 182 NIFLVLILSFYITLDGPRMGKSFVAVLPQSWHDEVDNLFAVIDRVFGGFMRAQFVNSLLY 241 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G+ + G+ V+ AI+ IP G + +++ ++ L L Sbjct: 242 GVANAIVMAMFGLGDIALASVVAAILVFIPLVGGFFALIPPALFAILF-APDRLGWLLLT 300 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I + + P LVG I L L F L+ G G G+ G + +IA I Sbjct: 301 LLIVQQVQFNIVMPRLVGQAIGLHPLLVFAALLLGGTVAGGWGVLFGIPVAGVIASI 357 >gi|258652494|ref|YP_003201650.1| hypothetical protein Namu_2284 [Nakamurella multipartita DSM 44233] gi|258555719|gb|ACV78661.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 406 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 88/258 (34%), Gaps = 5/258 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + V + P++++ + A + ++++ + + G Sbjct: 135 AAAIPALVEQGRRLVEAAPQYVAQLSDDSSAIGQLNQRFHLQETVQQIVD-----GGGPG 189 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + G ++ + + +F D + L + + Sbjct: 190 LASGVISVGEAVFGAFSGLLVVAVLTVYFLADMPRVRTTLYRFMPAPRRPRAILLGDQIM 249 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG +I++ +V GVP + L ++ A++ +IP + A+ Sbjct: 250 VKVGGYVLGNVVISVISAVVTFVWLIAFGVPYPLLLAILFALLDLIPVIGSLIAGALVAL 309 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 ++ + + D L P + G +++P L T ++ G +GL+G Sbjct: 310 AAFSVSVPVGLATIGYFVAYKLVEDYLLTPKVFGRVLRMPALVTVCAILIGGALLGLVGA 369 Query: 329 FIGPVLMALIAVIWKESI 346 + A I ++ +E + Sbjct: 370 LVALPTAAAIMLLVQEVV 387 >gi|145640286|ref|ZP_01795870.1| hypothetical protein CGSHiR3021_09515 [Haemophilus influenzae R3021] gi|145274872|gb|EDK14734.1| hypothetical protein CGSHiR3021_09515 [Haemophilus influenzae 22.4-21] Length = 348 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 122/346 (35%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E IP + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREF-----------TQSIPQYKVLLSQRVSDLTG 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I F + Sbjct: 108 LLQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVI----FMLAE 163 Query: 181 GFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ + + H + I R++ VI + ++ G+ + G Sbjct: 164 APTMKHKFAMVISSTPHDAAKEERHIDRVLQGVIGYLGIKSI-TSLLTGVGVFILLEACG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + ++ ++ IP G+ I+ + + L+ + + +V + Sbjct: 223 VQYAILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNII 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P ++G + L L F L+ +G +G+ + P+ MAL + Sbjct: 283 EPKMMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIAL 328 >gi|224045876|ref|XP_002187113.1| PREDICTED: similar to Transmembrane protein C9orf5 [Taeniopygia guttata] Length = 817 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 15/245 (6%) Query: 108 RWLSDIPGGMWASELWTKHL------SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 WL DI + ++ + + L + + G L Sbjct: 546 SWLGDILDWQDVASFVHDNIETFLSILESLWIVMSRNVSLLFTTVTALVTILFHSGTALL 605 Query: 162 DYCLSIIFMIIALFFFYRDG---FSISQQLDSLGEHLFPAYWKKIS-RIVPKVIRSTFLG 217 ++ LS++ + LF+ + + + SL P I + V + IR F Sbjct: 606 NFVLSVVIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAIRGVFDA 665 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLI-KGNI 275 +A GL + + G+ + AI+ +P G + + L + +G Sbjct: 666 SLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLVQGQG 725 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A L ++ + + VD + + GG T + GG +GL G IGP+L+ Sbjct: 726 CKALLLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAIIGPILL 782 Query: 336 ALIAV 340 ++ V Sbjct: 783 CILVV 787 >gi|33864295|ref|NP_895855.1| hypothetical protein PMT2030 [Prochlorococcus marinus str. MIT 9313] gi|33641075|emb|CAE22204.1| Domain of unknown function DUF20 [Prochlorococcus marinus str. MIT 9313] Length = 356 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 97/297 (32%), Gaps = 14/297 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F ++A +I F + + V + L ++ + L + Sbjct: 34 LAPFPGLFVTAALIAFLLDIPSRWINQRLGLPRWLAIGVVAVLAVGLLVLAGVALVPRLI 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++++ P WL G + + W P S L Sbjct: 94 DQLGQLINEL----------PGWLVAAEGWVSRLQEWASGRGLPSEFGDFSSDLLTRLSG 143 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS-R 205 + S+ + L L I + + + + P W+++ Sbjct: 144 --VATQLSQQLLGILGATLGITINTLLVLVLAVFLLLGGDPITAGLARWLPDQWRELVVD 201 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + R F G ++A+ + + L +P V V+ +IP + ++ V Sbjct: 202 TITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLFAVLIGFTTLIPYASALTIVGV 261 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 S L ++ + + IVD+ ++P L+G + L L G RT Sbjct: 262 SALLALQ-DPRMGLEILAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIALPIGART 317 >gi|218198014|gb|EEC80441.1| hypothetical protein OsI_22633 [Oryza sativa Indica Group] Length = 542 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 9/203 (4%) Query: 160 FLDYCLSIIFMIIALFFFY-RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L++ ++ + L++ +G ++Q+ L L + ++ I S L Sbjct: 345 VLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLP-LSKQVKDRCVEVIDHAISSVLLAT 403 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFN 277 IAI +G + + L V V I A++P P +S + LL++G Sbjct: 404 AKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAGQLLMEGRYVL 463 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLGLFIGPVLM 335 A + + I + ++ + G T ++GG+ L G +GP++M Sbjct: 464 AIVVTVVHLIIMDYGTTVIQEDIPGYNG----YLTGLSIIGGMALFPNALEGAILGPLIM 519 Query: 336 ALIAVIWKESIMAIKENKEKISS 358 ++ + + + E+ SS Sbjct: 520 TVVMALKNLYTEFVLADSEETSS 542 >gi|126661462|ref|ZP_01732518.1| hypothetical protein CY0110_29024 [Cyanothece sp. CCY0110] gi|126617254|gb|EAZ88067.1| hypothetical protein CY0110_29024 [Cyanothece sp. CCY0110] Length = 357 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 1/215 (0%) Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S + L++ I+ + + + SL + K Sbjct: 143 SSQQLLIGVSGLTRGIVGGVLNVFLAILLSGYMLSGSQQLINGIVSLFPIPWDEKLKDQV 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFT 263 V + + G +++ GL + G+ + LG I + +IP P+ + Sbjct: 203 VPVSQRMGGYIQGRLLVSFILGLTVSLGLKFLGIGEFALGLGTIAGMTNLIPFFGPVLGS 262 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + + + L I + L P LVG + +P L ++ GV+ + Sbjct: 263 IPALIVAVAQGGWLFLWVLLLFVIIQNLETYVLDPLLVGSSVNVPPLYQLLAVLSGVQLL 322 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G I P +A V+ + + K EK +S Sbjct: 323 GIIGALILPPWVAGAGVLLENLYLTPKLEAEKENS 357 >gi|126650595|ref|ZP_01722818.1| hypothetical protein BB14905_08393 [Bacillus sp. B14905] gi|126592751|gb|EAZ86750.1| hypothetical protein BB14905_08393 [Bacillus sp. B14905] Length = 350 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 131/358 (36%), Gaps = 22/358 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G R++I+ I V+LY ++ +L II + + + K + + Sbjct: 6 RSNGFKRFIILVGIAVALYLMRSMINLILLTFIITYLMNQLTTKTTKKIRKYTPMNEKAV 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV++ L + ++ + + + Q + ++ +E+ Sbjct: 66 TVTLYLLLVAGIVAVI----------YKYLPIVTQQVTQLFDLIASFNLDPDDNEI--AR 113 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 P KI +L G+D + + G I + +S+I + L + I + Sbjct: 114 YLAPTFEKIELGKYL-EQGVDITLKNITNIGKIIMQILISLILSLFIL----LEKKRIIE 168 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ IRS IIA ++ A + G P +A Sbjct: 169 FTAKFKDSKIGPLYDELHYFSRIFIRSFGKVIEAQFIIAAVNCVLSVIALSIMGFPHLIA 228 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++ I+ ++P G IS +SI G + + + + I L P L+ Sbjct: 229 LGIMLFILGLVPVAGVIISLIPLSIIAYSIGGLMYIVYILVIVMVLHAIEAYFLNPKLMS 288 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISSN 359 LP TF ++ +G+ GL IG P+ M L+ ++ S K+ + + Sbjct: 289 AKTDLPIFYTFMVILFSEHFLGVWGLIIGIPLFMFLLDILGVTSSEESKQKMDDVEDK 346 >gi|296283040|ref|ZP_06861038.1| hypothetical protein CbatJ_05440 [Citromicrobium bathyomarinum JL354] Length = 398 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 97/301 (32%), Gaps = 19/301 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F PV +A+++ P+ S + +A+V + +F+ ++ F + Sbjct: 62 FLPVTAAVLLTVLLAPLADRLSSWGVPN-----TLASVLALVIFVAIVVLAFSAILQPAF 116 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L ++ P + I + L++ + Sbjct: 117 SLFDRL----------PELIEQIGSRYREMQEEFAWLANANERLADLVGGSGATEVTLAG 166 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVP 208 + I L + + + FF + ++ G F K ++ R V Sbjct: 167 PSVFQQVAISAPVLLLEVMLTFLMAFFMVEARGRLRRNILFGRTSFGTSVKAARVLREVQ 226 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + L + I +G G+V+ W G+P+ + G + ++ IP P++ T + + Sbjct: 227 DRVAAYILTVAWINLGVGIVVALGAWAMGLPAPIMWGGLATLLNFIPYVGPLAMTGLLVL 286 Query: 269 --LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L ++F + + P ++G + + G + Sbjct: 287 FGLGTADSVFLGMIPAVAYITLHVFEANAITPAILGRRFTMNPVMILLAFSYFTWIWGAI 346 Query: 327 G 327 G Sbjct: 347 G 347 >gi|323136769|ref|ZP_08071850.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322398086|gb|EFY00607.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 346 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 109/327 (33%), Gaps = 17/327 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++ + + L F V + ++I SF ++ + + ++++ +V Sbjct: 29 AIMLGLLFWRLSEFLPIVFATIVIAVAWRGAAESFGARFGIPTGLSILTVALALVVGVVV 88 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ + + E+ D+P + + + + ++ Sbjct: 89 TLMAFGGQLVRQYDEVA-----------------LDVPAAIELIQRHVEEHPWGRFVEKF 131 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + + +F II + D ++++ +L Sbjct: 132 VLDVDYSKAAAPIAQHVGAALGSLGNAFAMTLFAIIGAAYLAADPKGHAERVVALTPAHH 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + +R + + + G A W GVP+ +AL I+ +A IP Sbjct: 192 REKVSRFLQRSGGSLRQWLILQLYVIVMNAFFAGVALWAFGVPAPLALATISGALAFIPY 251 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I V + + + +A L F+ + PFL + +P + F + Sbjct: 252 FGSIIALVVGALVALPHGVDSAALAALSIGAASFVEGYLITPFLQSRSLSVPAVVLLFCM 311 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G +G+ + +++V ++ Sbjct: 312 LAFGALFGAMGVVLAVPATVVLSVAYE 338 >gi|227551511|ref|ZP_03981560.1| permease [Enterococcus faecium TX1330] gi|227179346|gb|EEI60318.1| permease [Enterococcus faecium TX1330] Length = 300 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 4/209 (1%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A + ++ I FFF + + F +++ + K Sbjct: 88 ASIALGYLQDIGKLAVAFAMSFILSFFFMIEKQKTIFFSRLFLKSEFSWFFQDLYYFADK 147 Query: 210 VIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 + + IIA+ L+ A G ++L ++ I+++IP I + Sbjct: 148 FVNTFGLVLEAQFIIALLNTLLTTIALAAFGFHQLLSLAIMIFILSLIPVAGVIISCIPL 207 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 S +G I + + + + I L P L+ LP TF L+ R G+ Sbjct: 208 SFIAYSQGGIRDVVYILMTILVVHLIESYVLNPKLMSSKTDLPIFYTFVVLLVSERFFGV 267 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL +G + + K + +E Sbjct: 268 WGLIVGIPIFTFFLDVLKVKKIPNHSPRE 296 >gi|169333672|ref|ZP_02860865.1| hypothetical protein ANASTE_00056 [Anaerofustis stercorihominis DSM 17244] gi|169259666|gb|EDS73632.1| hypothetical protein ANASTE_00056 [Anaerofustis stercorihominis DSM 17244] Length = 381 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 107/316 (33%), Gaps = 21/316 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIG--FTSWPIYSS--------FISKKEESSTFLAVI 65 ++ ++ + L F A I+ F + + + S +I Sbjct: 32 VLGVVGTAFGILSPFIIGFALAFILNKPFVFFRDKALKVLIDKKKKKERVGLRSGLAILI 91 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V V L ++ F+ + + LV + +++ + + ++ +E Sbjct: 92 VYVLVALLLVILSSFVIPQLVTSISGLVDYIPQYSKNLFDM---IDNVVDKFIINETMLD 148 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + I + + + + I F S F ++ +++I I + D + Sbjct: 149 TIQKASTTIISTMKTVLSGAVPAIVSFVSNFASNVINIAIAVIVSI----YLLIDKDHLI 204 Query: 186 QQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 Q + + ++S + K G I AI G++ + +P Sbjct: 205 YQYRLIIKAFFSEKKAKRILEVSDLTAKTFSDFIGGQIIDAIIIGVLCSIGLAVLKIPYA 264 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +G I +IP P + S+ +L F A ++ + + + P +V Sbjct: 265 LLIGTIVGFTNIIPYFGPWIGSIPSVLILFMVRPFYALIFIVFVIVLQQVDGNIIYPHVV 324 Query: 302 GGPIKLPFLPTFFGLV 317 G + L L F ++ Sbjct: 325 GNSVGLGALFVTFSII 340 >gi|77465129|ref|YP_354632.1| membrane transporter [Rhodobacter sphaeroides 2.4.1] gi|77389547|gb|ABA80731.1| Conserved hypothetical membrane/transport protein [Rhodobacter sphaeroides 2.4.1] Length = 388 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 103/322 (31%), Gaps = 15/322 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 YF + P++ L++ T P+ + + T + + Sbjct: 50 GFYFARDVVLPLMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAV------- 102 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 L + + A + G + I A ++ +S + + + Sbjct: 103 -SAFLLSGPVSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRVA 161 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA-YWK 201 + I ++++ + F G +L Sbjct: 162 VQTPGILSSAVGSVASILTTIIVTLVLAL----FLLASGDLFYIKLIEGFPRFGDKKRAL 217 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI- 260 +I + + + L +TII G G+V+G W G+PS + + ++ +P I Sbjct: 218 RIVYGIERRVSRYLLSVTIINAGLGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIA 277 Query: 261 -SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++ ++ ++ A + I + + P ++G ++L + F ++ Sbjct: 278 GVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFW 337 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + + I V+ Sbjct: 338 GWLWGIPGALVAVPFLVCIKVV 359 >gi|326772906|ref|ZP_08232190.1| AI-2 transporter TqsA [Actinomyces viscosus C505] gi|326637538|gb|EGE38440.1| AI-2 transporter TqsA [Actinomyces viscosus C505] Length = 432 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 114/345 (33%), Gaps = 35/345 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I V LY ++ FAP AL + T P+ S + + Sbjct: 32 LTIGAVGLYLIQDLFAPAFFALTLVVTVRPLVSWMTRHRVPR---------------VVA 76 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + V Q +P++ +W + + + + Sbjct: 77 ATAAIALIFTFVVLLFAALAVAVAQLVDTLPQY------APKFQAIWKQVETQLNGMGVD 130 Query: 137 SETFLKT-----NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 LK + + S G + + + ++ +F + + ++ + Sbjct: 131 QSAVLKQVTNVLDTSQLVMVAQSVLGQLTSASAMMGVMSMVVVFLMF---DTAKIEIRAA 187 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +RS ++ T+ + ++ W VP + GV++ I Sbjct: 188 ALGVLKPGMASALVSFCEAVRSYWMVSTVFGLIVAVINAVTLWYLNVPMAITWGVVSFIT 247 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP G + +I L+ + A + L F++ ++P G + L Sbjct: 248 NYIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYTAANFVIQSLIQPKFTGDAVGLNTT 307 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TF L+ G LG ++A+ ++ ++++ + + + Sbjct: 308 TTFLCLLFWSTVTGALG-----TILAVPLTLFVKALLIDSDPRSR 347 >gi|320187760|gb|EFW62435.1| Putative PerM family permease [Shigella flexneri CDC 796-83] Length = 349 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 115/321 (35%), Gaps = 22/321 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + +IL ++ +L AL P+ + FI + + + ++ V + Sbjct: 14 LLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVTITIVVVVML 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L L E +S + N+ + + + Sbjct: 74 IA-----LTALVGVLAASFNEFISMLPKFNKE--------------LTRKLFKLQEMLPF 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L + E L+ + + F + + S++ +++ + F + + ++ Sbjct: 115 LNLHMSPERMLQRMDSEKVVTFTTALMIGLSGAMASVLLLVMTVVFMLFEVRHVPYKM-R 173 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + R + V L + ++ G+++ L GV + V+ + Sbjct: 174 FALNNPQIHIAGLHRALKGVSHYLALKTLL-SLWTGVIVWLGLALMGVQFALMWAVLAFL 232 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P GA IS I +L+ ++ + + ++ L P ++G + + Sbjct: 233 LNYVPNIGAVISAVPPMIQVLLFNGVYACILVGALFLVVHMVIGNILEPRMMGHRLGMST 292 Query: 310 LPTFFGLVGGVRTMGLLGLFI 330 + F L+ +G +G+ + Sbjct: 293 MVVFLSLLIWGWLLGPVGMLL 313 >gi|256829469|ref|YP_003158197.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256578645|gb|ACU89781.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 379 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 88/309 (28%), Gaps = 15/309 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +L +L P AL++ + P+ +S + + Sbjct: 26 VITTLGYLSDVLIPFAVALLLAYILNPLVYRV-QMFVKSRGLAIGLTLFFFFAVLGGLCW 84 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + E + + + + +P +W + + P+ Sbjct: 85 IVIPLMGREAAHMGRLISDLVSNSKLAEEAANRLPPDVWQA--LRDYFDTPEVRNFFRTD 142 Query: 140 FLKTNGIDFIPRFASRFGMIF------LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + I L + +++ L F D + + Sbjct: 143 SFISMAQSTLRKVLPGLMGIISGTYSVLLALVVPAVVLLYLIFLLMDFQKVRVAWKEMIP 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + F G T IA G+ + + L G+P + LG ++ + Sbjct: 203 PQYRDSVVSFVEEFDVAMNRYFRGQTTIAGILGIFFATGFSLVGLPMGILLGFFVGLLNL 262 Query: 254 IPGGAPISFTA----VSIYLLIKGNIFNAT--CLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I +I+ L G F L + I D L P ++G + L Sbjct: 263 VPYLQLIGLIPAVVLAAIHALETGQSFWVVMGMTGLVFVVVQIIQDAVLVPRILGKAMGL 322 Query: 308 PFLPTFFGL 316 L Sbjct: 323 SPAVMLLSL 331 >gi|186683719|ref|YP_001866915.1| hypothetical protein Npun_R3576 [Nostoc punctiforme PCC 73102] gi|186466171|gb|ACC81972.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 364 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 126/342 (36%), Gaps = 26/342 (7%) Query: 9 QGIMRWMIMFIILVSLYF-----------LKGFFAPVLSALIIGFTS-WPIYSSFISKKE 56 ++RW+I ++ ++ + ++ A ++ F +P+ + + ++ Sbjct: 6 NQLLRWLIFTLLFPLVFLNGWLAFLLVKNFQPVVTILVLATLLAFVLNYPV--AILQRQG 63 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + +S + + + + L + + E+V + + L++ Sbjct: 64 VKRGYAVSLVFISALIIIVALGITLVPIVLEQFNEMVKVLPQWIDSSEEKLQILNNWFFN 123 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + L+ F+ + I +++ F+ Sbjct: 124 HKLNVNLSHLLTQVTDQLPNELEFVTDKLLSIIVDTIDSVSDGL--------IIVVLTFY 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG I Q + + L ++ +++S+ + + ++ +G +A+ G+ + Sbjct: 176 LLLDGPRIWQGI---FKKLPGSFAQQVSQSIQQNFQNYLIGQVTLALLMGVSETLMFLAF 232 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + G+ ++++IP G + V +++ + + A +F + ++D+ + Sbjct: 233 QVQFSLLFGLGVGLLSLIPFGD-VVSVVVITFIIATHDFWLAVKVFAVAVVIDQLIDQAI 291 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 P L+G L + L+ G G+LGL I + I Sbjct: 292 APRLLGRFTGLRPIWVLIALLVGTNVGGVLGLLIAVPVAGFI 333 >gi|302060722|ref|ZP_07252263.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato K40] Length = 334 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 104/335 (31%), Gaps = 16/335 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++F+ + L G APVL+ L++ F + + + V+ T+ Sbjct: 1 VLLFVAFTLVLTLGGMLAPVLAGLVLAFLMHGLVGLLERLRMPEVAAVGVVFTL------ 54 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 F+ + + + P L+ + HL + + Sbjct: 55 -----FIGALLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDEQVL 109 Query: 135 ILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + E G F+ + ++ + ++ + I +FFF +D I + Sbjct: 110 LAIEVARGEVGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHVIGRWARGYL 169 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI-- 250 A +++ + + I + G I G V A+ G+ L ++ I Sbjct: 170 PR-ERALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYAALLAMLVGISV 228 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + G ++ I L G L + + + L P L + L + Sbjct: 229 VVPYVGAVVVTVPVALIGLFQWGWSDQFIYLMIAHGVIQALDGNVLVPLLFSEAVNLHPV 288 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ G G+F L L + Sbjct: 289 AIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAW 323 >gi|297572327|ref|YP_003698101.1| hypothetical protein Arch_1804 [Arcanobacterium haemolyticum DSM 20595] gi|296932674|gb|ADH93482.1| protein of unknown function UPF0118 [Arcanobacterium haemolyticum DSM 20595] Length = 414 Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 111/331 (33%), Gaps = 21/331 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ ++ + ++ + F P+ A + P+ + + + ++LA + T+ + I Sbjct: 31 LITVVGIGIHSVADVFTPLFLAFTLVLALRPLGQWLMRHR--APSWLASLTTLVLTLTLI 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + + + ++V + + + + + L Sbjct: 89 AGLLGITVWSLTPVPDMVVEYSSKFESTMYG----------------FLQWLQTQGINTK 132 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ ++ I + + + + IA FF D + + + + Sbjct: 133 DLASYASQVNVNSIVSWTFSLVGTLFSFGGLLSIVAIAAFFLTID--TTVTRSRAHIINK 190 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + R K +R ++ T+ + + G +P I +P Sbjct: 191 DHWNMGEALRGFEKRVRHYWIVTTVFGLVVAFIDGLVLEWMSIPLAWTWAYWAFITNYVP 250 Query: 256 -GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G I + L+ +F+ + ++ ++P L G + L TFF Sbjct: 251 NIGFVIGVIPPMLIGLLDSGWQTMMWVFVAYTVINVVIQTFIQPKLTGDIVGLSPSVTFF 310 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV +G+LG + L ++ +S Sbjct: 311 SLVVWTSIVGMLGSILAVPLTLFFKALFVDS 341 >gi|124024399|ref|YP_001018706.1| hypothetical protein P9303_27111 [Prochlorococcus marinus str. MIT 9303] gi|123964685|gb|ABM79441.1| Domain of unknown function DUF20 [Prochlorococcus marinus str. MIT 9303] Length = 356 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 111/330 (33%), Gaps = 21/330 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK-------GFFAPVLSALIIGFTSWPIYSSFIS 53 M ++ P + +++ + ++L+ L+ F ++A +I F Sbjct: 1 MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQ 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + V + L ++ + L + ++ +L++++ P WL Sbjct: 61 RLGLPRWLAIGVVAVLTVGLLVLAGVALVPRLIDQLGQLINEL----------PGWLVAA 110 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G + + W P S L + S+ + L L I + Sbjct: 111 EGWVSRLQEWASGRGLPSEFGDFSSDLLTRLSG--VATQLSQQLLGILGATLGITINTLL 168 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKIS-RIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + + + P W+++ + R F G ++A+ + Sbjct: 169 VLVLAVFLLLGGDPITAGLARWLPDQWRELVVDTITGTFRGYFAGQVLLALILSGGQIAV 228 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + L +P V V+ +IP + ++ VS L ++ + + IV Sbjct: 229 FTLLDIPFGVLFAVLIGFTTLIPYASALTIVGVSALLALQ-DPRMGLEILAAAIAVGQIV 287 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 D+ ++P L+G + L L G RT Sbjct: 288 DQVIQPRLMGSIVGLQPAWLLIALPIGART 317 >gi|87123583|ref|ZP_01079434.1| hypothetical protein RS9917_06970 [Synechococcus sp. RS9917] gi|86169303|gb|EAQ70559.1| hypothetical protein RS9917_06970 [Synechococcus sp. RS9917] Length = 349 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 106/290 (36%), Gaps = 13/290 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L++ +I F I S +++++ +I T+ + ++ + L + Sbjct: 30 LAPFPGLFLTSALIAFLLD-IPSRWLNRRGLPRWSAILIVTLVTVGGVVLAGVTLVPRLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + + W++ + + L ++ L Sbjct: 89 DQLAQLINALPGW---LVAAEAWINRLQDLAASRGLPSEFGDLSSDLLTRVSRVASQLSQ 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + G+ ++ + +++ FF G +I+ L + + Sbjct: 146 RLLAILGATLGI-----TINTVIVLVLAVFFLLGGDAITAGLARWLPERWRQL---VVST 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + G+P V V+ + +IP + ++ AVS Sbjct: 198 ITRTFRGYFAGQVLLALILSAGQIVVFTVIGIPYGVLFAVVIGLTTLIPYASALTIVAVS 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 L ++ + + +VD+ ++P L+G + L L Sbjct: 258 ALLAVQ-DPRTGLEILAAAIGVGQVVDQVIQPRLMGSIVGLQPAWLLIAL 306 >gi|221369132|ref|YP_002520228.1| hypothetical protein RSKD131_3295 [Rhodobacter sphaeroides KD131] gi|221162184|gb|ACM03155.1| Hypothetical Protein RSKD131_3295 [Rhodobacter sphaeroides KD131] Length = 389 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 103/322 (31%), Gaps = 15/322 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 YF + P++ L++ T P+ + + T + + Sbjct: 51 GFYFARDVVLPLMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAV------- 103 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 L + + A + G + I A ++ +S + + + Sbjct: 104 -SAFLLSGPVSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRVA 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA-YWK 201 + I ++++ + F G +L Sbjct: 163 VQTPGILSSAVGSVASILTTIIVTLVLAL----FLLASGDLFYIKLIEGFPRFGDKKRAL 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI- 260 +I + + + L +TII G G+V+G W G+PS + + ++ +P I Sbjct: 219 RIVYGIERRVSRYLLSVTIINAGLGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIA 278 Query: 261 -SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++ ++ ++ A + I + + P ++G ++L + F ++ Sbjct: 279 GVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFW 338 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + + I V+ Sbjct: 339 GWLWGIPGALVAVPFLVCIKVV 360 >gi|309776898|ref|ZP_07671868.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 3_1_53] gi|308915309|gb|EFP61079.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 3_1_53] Length = 373 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 108/305 (35%), Gaps = 11/305 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ P + ++ + P+ K + S++ L++ L+FL Sbjct: 44 MLRSVMQPFVIGFVLAYVMHPLVEFLEKKGIPKN--------FSIIALWVCVLVFLIVML 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ M L K+ I W+S+ + + ++ S ++ + +++ + Sbjct: 96 VMLMPVLYDKINEFMTSMIDGVVWISNKIKTLGNMKDFSLVNSITNNIVNMLQSY--DDW 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L+ +I+F II + D I L HLF Sbjct: 154 VPQLVSSLPGLMNTVLNMVTNILFSIIIAIYMLFDFDRIKLGLRKFI-HLFFKNSDVYLH 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + + I+ + + + + Y++ G + +G++T+ +IP ++ Sbjct: 213 EIDQNVTVYLKSLIILMLIKFVEYSAFYFMIGHQDWLIIGLLTSFGVIIPYLGGTIANSI 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + N L + I + + P + + L T F + G G Sbjct: 273 GIITALTLPPSNIVALIIGIMILSNVDAYVISPLVHEKRSAMGPLVTLFAVFAGGVISGA 332 Query: 326 LGLFI 330 +G+ + Sbjct: 333 VGIMV 337 >gi|323528017|ref|YP_004230169.1| hypothetical protein BC1001_3697 [Burkholderia sp. CCGE1001] gi|323385019|gb|ADX57109.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 652 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 3/167 (1%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + I +++ +F + + + G I+ ++ R F+ + + Sbjct: 193 TFIVLVVTIFILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSR-YFVAQLGVNLSA 251 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G V+ + GVP + GVI A++ +P G + A + I+ A + Sbjct: 252 GGVIAIGLAIIGVPGALLFGVIAALLRFVPYIGIWIAAILAFILAAAIQPQWTMAVYTLI 311 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + P L G L L + G +GL + Sbjct: 312 LFIVVDVVAGQIAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVL 358 >gi|163746940|ref|ZP_02154297.1| Conserved hypothetical membrane/transport protein [Oceanibulbus indolifex HEL-45] gi|161380054|gb|EDQ04466.1| Conserved hypothetical membrane/transport protein [Oceanibulbus indolifex HEL-45] Length = 371 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 120/337 (35%), Gaps = 15/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + V+ YF K P+L II T P+ S + V Sbjct: 10 RRLLEVLVLIALFVTAYFAKDLLLPILLGFIIALTLSPLIRSLEKL-----GIAPPLGAV 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ L + + L + + + N+ + W+ + A+E + Sbjct: 65 MLIGLVGLVIFVLAGLSAGTVATWADDIPSMGNEIRRKLQGWVQTVENVRSATEQVEQIT 124 Query: 128 SHPQSLKILSETFLKTNG-IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + E +K G ++ +R G + +F++ + FY + Sbjct: 125 AENGGNGAAEEVVVKQPGLLNNAMTAGARIGGTVAVALVLALFLLASGDMFY------LK 178 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + S K V + + L +TII G G+ +G + G+P G+ Sbjct: 179 LVQSFQTFTGKKRALKAVYDVERRVSRYLLTITIINAGLGISVGLYLFALGLPVPYVWGL 238 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ +P G I V Y + ++ A + I + + + P+LVG Sbjct: 239 AAFLLNFLPYIGGVIGAVLVGAYAIASFDSLGYAILAPIGYQILTGVEGQFITPYLVGRR 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++L + F +V G+ G + + + VI Sbjct: 299 LELNTVAVFLTVVFWGWLWGIAGALVAVPFLVVFKVI 335 >gi|300022035|ref|YP_003754646.1| hypothetical protein Hden_0504 [Hyphomicrobium denitrificans ATCC 51888] gi|299523856|gb|ADJ22325.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 604 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 103/342 (30%), Gaps = 10/342 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIATVS 69 ++ +++ +L + P+ A+I F PI E S F V+AT Sbjct: 13 AALVVAALVIATLVLGRAILVPLALAVIGCFILVPIVRWLEEHSVPEWLSVFSVVVATTG 72 Query: 70 VMCLFIVPLLFLFYYGMLEM----KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + L E+ ++ KV P I ++ + Sbjct: 73 LLLGASIALSSQLLSLTAELPAYRSNVMDKVHAVIGSSAPSGVVSRAIDAVETYQKMLNR 132 Query: 126 HL--SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L QS + + K I + + + F Sbjct: 133 ELKLGGEQSTEPDGKPETKVVVAQETTSDTWHGIQILAEPLAQMALTFLFTLFLLAQYRD 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ + + + + F G ++ G+ +G + GVP+ Sbjct: 193 LRDRIVRIFGTDNMTETTSAMSDAGERLSALFTGQVMLNASFGVFVGCVLMIVGVPNAPL 252 Query: 244 LGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ +M +P + + + A C AI ++ + L PF + Sbjct: 253 WGVVAFVMRFVPFIGVYVAAIPPILLAAAVDPGWTKAICTLALFAIGEPVMGQVLEPFFL 312 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G L G +GL + L ++ V+ + Sbjct: 313 GKRAGLSPFAMILAASFWTLVWGPIGLVLAAPLTLVVVVLGR 354 >gi|182418999|ref|ZP_02950255.1| permease [Clostridium butyricum 5521] gi|237668112|ref|ZP_04528096.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377282|gb|EDT74850.1| permease [Clostridium butyricum 5521] gi|237656460|gb|EEP54016.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] Length = 342 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 63/165 (38%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 LS+ + I +++F DG + ++ + + I + KV++ G + Sbjct: 156 ILSLAVIPIIIYYFMCDGDRLFLRMMLILPTNKREVTQNIVMDINKVLKRYISGQLYLCG 215 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G++ + + + + A+ +IP PI ++ + + + A + + Sbjct: 216 IIGILTFILLLSLQIKFPLWIAIFNALFNIIPYFGPIFGMVPAVIVALMISPAKALWVLI 275 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I L P + G I++ L+ G + G +G+ Sbjct: 276 GMILIQQIEGNILSPKITGDSIEMHPFVIIVLLLIGDKFGGFIGM 320 >gi|119960782|ref|YP_949660.1| permease [Arthrobacter aurescens TC1] gi|119947641|gb|ABM06552.1| putative permease [Arthrobacter aurescens TC1] Length = 354 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 110/304 (36%), Gaps = 10/304 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + ++ L+ + +AL I +P+ K AV+A + Sbjct: 25 VLVALALGSAVITLRYSLTLIFAALFISLGLYPLVRWLERWKLSRGG--AVLAVAVGFLV 82 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +V L+ ++E + +V+ ++ + W D G + + L Sbjct: 83 LVVVLIRFIVPILVEEGAALVRVLPSSFDAVGEQEWFRDFNGSLGG--------ALSPLL 134 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + N I A + G ++ ++IF+++ +F + L +L Sbjct: 135 EWLETSAADPNVWLAIGGGAVQVGYNVVNGTFAVIFVVVLTLYFVAGHEVMKSNLYALVP 194 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + IS + + GM+I+A+ + +AG L V+ + + Sbjct: 195 ASRRESFADISETIIASVGKYLSGMSILALLNAIFTFIVLSVAGARYAAVLAVLAFPITL 254 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP TA+ + + + A +FL + + + L P +VG I +P Sbjct: 255 IPLVGSAISTAIITVVSLFTSPATALVVFLVMLVYMQVEAYVLTPRVVGKAISIPGSLVL 314 Query: 314 FGLV 317 G + Sbjct: 315 IGAM 318 >gi|222528450|ref|YP_002572332.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor bescii DSM 6725] gi|222455297|gb|ACM59559.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor bescii DSM 6725] Length = 371 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 115/360 (31%), Gaps = 24/360 (6%) Query: 1 MRETMLNPQGIMRWMIMFI---ILVSLYFLKGF----------FAPVLSALIIGFTSWPI 47 MRE N + ++ I I Y +K F F PV+ L I P+ Sbjct: 2 MREFTKNRFVVAMIYVIIISAFIFSCAYLIKTFDLFVRFMIKAFIPVIIGLFIAVVFEPL 61 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K T A++ + + + L Y + E LV+ + + I Sbjct: 62 LKYMEKNKVNR-TISAILILIVLNIILGFMLAEGIYILVNECMRLVASLQNIDYDKIY-- 118 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI---FLDYC 164 + + L P I S TN ++ I + + + L Sbjct: 119 ---QALDKLFSNVKNIYSGLPGPIVNFIQSGVDELTNVLNQIATMSLKVIKVIPATLKGV 175 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 F +++ FFF RD + L I+ V + I+AI Sbjct: 176 TVWFFSVLSAFFFMRDRHKMRSWLIQNFSVQIYKELSSIAFKVIDSVVDYAKSQIILAIL 235 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIM-AMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 L + P + + ++ +M + G+ I I G+ L + Sbjct: 236 MFLSGLVGLSIIKAPYFLVVSLLLGLMSIIPIIGSGIILLPWIAGSFIAGDTNFGIKLLI 295 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I L I + +V + + T + GV G G IGP+L+ + +++ Sbjct: 296 VYLIILGIRE-FASIKIVANQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 354 >gi|228900544|ref|ZP_04064767.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 4222] gi|228859095|gb|EEN03532.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 4222] Length = 292 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 1/151 (0%) Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +F + +IA+ ++ A + G P + L V+ ++ + Sbjct: 133 KIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLVLAVMVFLLGL 192 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G IS + I G + + ++ + + L P + LP T Sbjct: 193 IPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFMSAKTNLPIFYT 252 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L+ +G+ GL IG + + + Sbjct: 253 FMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 283 >gi|255531139|ref|YP_003091511.1| hypothetical protein Phep_1233 [Pedobacter heparinus DSM 2366] gi|255344123|gb|ACU03449.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 370 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 14/300 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ + K + A+I+ V ++ + L FL K+ A Sbjct: 48 PMANFMEQKWRFKRSIAAIISVVLMIGVISSILYFLANQLTDLWKDWPLLKHQAETSFHD 107 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 V W+S G K + + ++ + T + +S + Sbjct: 108 VQHWISRTFGVNA-----QKQIDYLKNSASSAVATSATVLGATLLTVSSTLLFLSFLLLF 162 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + F L S+ E +I R + +I+ G+ + Sbjct: 163 TFFILNYRGILF--------NFLSSVFEEKHKQKVSEIVRQIQYIIKKYITGLFLQMFIV 214 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLW 284 +++ W+ V V LG+I+ I ++P G + + + + Sbjct: 215 TVLMIFTLWVLNVKYAVLLGLISGIFNIVPYLGIFTALLISVLITFATAGAAKVLLVLIA 274 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L P +VG +K+ L F G+V G G+ G+F+ +A++ +I+ + Sbjct: 275 FVSIHALDGNVLMPLVVGSKVKINALFAFIGIVVGEMIWGISGMFLCIPYLAMLKIIFDK 334 >gi|227486232|ref|ZP_03916548.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227235863|gb|EEI85878.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 408 Score = 62.9 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 85/269 (31%), Gaps = 1/269 (0%) Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + +++ A V+++ ++P L + E ++ +G + Sbjct: 77 HEKLRRSFSLILSWIIFFAMVTIVLTVLIPELSRAVGVISENIPAFMNSLIDFINGSKLL 136 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 +S E+ + +S + + ++ I+ + L + Sbjct: 137 TNVSKFIV-TRLEEINIERISDSFTKILQDFFRPDSDFINKTGSIINSVSQGILSLSIGF 195 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +F + + ++ + + ++++ + + G+ Sbjct: 196 VFSLYVSMNKTKLKNGAARLVFANLSEKTARQIVYVAKLSYDSFARFLETRILSCLALGV 255 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 W+ +PS + ++ MIP T++ I L+ + A ++ I Sbjct: 256 ACFIGMWVLRLPSAGMISILMGAFDMIPYIGAFLATSIGIILIFTYSPGKALVFLIFILI 315 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + P ++G LP + F + Sbjct: 316 LQNVQQQLFYPLVIGKHQGLPPIWIFVSV 344 >gi|269964566|ref|ZP_06178805.1| putative permease protein [Vibrio alginolyticus 40B] gi|269830693|gb|EEZ84913.1| putative permease protein [Vibrio alginolyticus 40B] Length = 356 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 121/344 (35%), Gaps = 34/344 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF K P++ + I P + K + TV + F+V + Sbjct: 25 GLYFAKPILLPIVLSTFISLLCSPFINYLEDKGLPRA------ITVVLTLSFLVGASIIG 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS------LKIL 136 M E P +W S++P + ++ + L I Sbjct: 79 LAAMSE----------------PAKQWWSELPSIVKNVSQEVSEVTKASADHLNTPLNIA 122 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + G + + + ++ ++F G S+ ++ S Sbjct: 123 NDMSMDEVGNNTVFSLVKTLATTTPTILTQAMIVLFMVYFMLNHGRSLFRKSVSYLHGFA 182 Query: 197 PAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + K + +T++ G GL +G+ +++ G+ G +M P Sbjct: 183 KQRQAIELVKALQKDLSRYIGTITLVNAGLGLSVGAVFFVLGLEDPFLWGAFAGVMNFAP 242 Query: 256 GGAPI---SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P+ YL ++ F T + ++ + I + + P L+G L L Sbjct: 243 YLGPVISMVSFGFVAYLQLESVSFMLTVVSVY-LLLNLIESQFVTPTLLGKRFNLNPLVI 301 Query: 313 FFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 F LV G +GL IG P+L+ + ++ + + +N+ K Sbjct: 302 FVWLVFWGWLWGGMGLLIGVPLLVCINILVDRLELCQSTQNQAK 345 >gi|227524980|ref|ZP_03955029.1| permease [Lactobacillus hilgardii ATCC 8290] gi|227087791|gb|EEI23103.1| permease [Lactobacillus hilgardii ATCC 8290] Length = 320 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 7/242 (2%) Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDG 181 +L +L+ ++E ++N + + S +++ +I FFF + Sbjct: 75 SNLPDDNTLRWVNELIKQSNVMAQVKNGVSLIWRYITGVGTMGITLFLSMILSFFFAIEK 134 Query: 182 FSISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + F +++ + IAI ++ + Sbjct: 135 KTMYNFSHLFLDSDFSWFFQDLYFFGKKFVATFGVVIEAQFFIAIVNTVLTTIVLAFMHL 194 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P L ++ I+++IP G ISF +S+ G + + L + + + L Sbjct: 195 PQLAVLALMVFILSLIPVAGVIISFIPLSLVGYSVGGLQDVLYLIITIVVVHALEAYVLN 254 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P + LP TF L+ G G+ GL G + + I K Sbjct: 255 PNFMASKTNLPIFYTFVVLLVGEHFFGVWGLICGVPVFTFLLDILGVKRHNEPLPPAKPD 314 Query: 358 SN 359 + Sbjct: 315 TK 316 >gi|307725764|ref|YP_003908977.1| hypothetical protein BC1003_3746 [Burkholderia sp. CCGE1003] gi|307586289|gb|ADN59686.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 652 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 3/167 (1%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + I +++ +F + + + G I+ ++ R F+ + + Sbjct: 193 TFIVLVVTIFILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSR-YFVAQLGVNLSA 251 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIP--GGAPISFTAVSIYLLIKGNIFNATCLFL 283 G V+ + GVP + GVI A++ +P G + AV + I+ A + Sbjct: 252 GGVIAIGLAIIGVPGALLFGVIAALLRFVPYIGIWIAALLAVFLAAAIQPQWTMAVYTLI 311 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + P L G L L + G +GL + Sbjct: 312 LFIVVDVVAGQIAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVL 358 >gi|330465325|ref|YP_004403068.1| hypothetical protein VAB18032_06720 [Verrucosispora maris AB-18-032] gi|328808296|gb|AEB42468.1| hypothetical protein VAB18032_06720 [Verrucosispora maris AB-18-032] Length = 393 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 1/166 (0%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG ++ + R+ + + S G +IA + + +G A L Sbjct: 195 LIKDGRAMWHWTLRRMTGPNREVAAEAGRVGWRTLGSYTRGTMLIAAIDAIGIGLALVLL 254 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD-KT 295 GVP L +IT I +P AV++ + + N L L I + ++ Sbjct: 255 GVPLAFPLALITFIGGFVPIIGATVAGAVAVLVALAANGPTTALLTLAAVIAVQQIEGNL 314 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P ++ ++L + + G G+ G F+ + A+ + Sbjct: 315 LEPLVMKRQVRLHPVVILLAVTAGTLIAGIAGAFVAVPIAAVAWRV 360 >gi|114798789|ref|YP_759795.1| hypothetical protein HNE_1074 [Hyphomonas neptunium ATCC 15444] gi|114738963|gb|ABI77088.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 349 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 38/335 (11%), Positives = 101/335 (30%), Gaps = 20/335 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + I ++ + ++ F + +A ++ I + A + Sbjct: 13 RLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L E+ + +PG ++ + Sbjct: 73 MTGSVAAILWIFGAQLASELSGVTD-----------------RLPGAWQRAKETLEAHPA 115 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSISQ 186 +L E + + + G L + + ++ +F F S Sbjct: 116 GSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIFIAAFLTTSAVSTRN 175 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + K + ++ LG++I + V+ WL GVP+ + L + Sbjct: 176 GVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLAL 235 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +P P+ + L + A + + + P + Sbjct: 236 IAGLAQFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTS 295 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + F ++ +G LG+ + ++ +++V Sbjct: 296 ISPALNLFAILAFGMLLGPLGVLLATPILVVLSVF 330 >gi|150392313|ref|YP_001322362.1| hypothetical protein Amet_4632 [Alkaliphilus metalliredigens QYMF] gi|149952175|gb|ABR50703.1| protein of unknown function UPF0118 [Alkaliphilus metalliredigens QYMF] Length = 395 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 100/308 (32%), Gaps = 22/308 (7%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-----------SKKEESSTFLAVIATV 68 I + L LK +PV+ + I + P F +KK+ V + Sbjct: 41 IFLRLGILKRILSPVIIGIFIAYLLNPGVRWFENYIYCRVEYIANKKKLLRVLSVVTMYL 100 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L + ++F+ + +++ ++ + + S+ S + + + Sbjct: 101 LVIGLIVTVIIFVAPQIGNNISDILRRMPEYINYSNDLINHWSEELDLRNLSNVTDQFEN 160 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L+ + I S L++ L I+ F+ D S + Sbjct: 161 NVNDIFNRVSAILEYILENIIVSIMS-ITSGVLNFVLGIVIS----FYLLGDKESFKKGT 215 Query: 189 DSLGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + K R + +G ++ + ++ + G+ + + Sbjct: 216 ERVLRATLADKTVNKMKDFGREADMIFSKFIIGKSLDSFIIAIMCLIGLQIMGIRYALLI 275 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI I MIP G I I + A L ++ F L P ++G Sbjct: 276 SVIIGITNMIPYFGPFIGAVPAVIITFFDSPVKAAWVLLFILGLQQFDG-LILGPKILGD 334 Query: 304 PIKLPFLP 311 + L + Sbjct: 335 SVGLSPVW 342 >gi|229138654|ref|ZP_04267236.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST26] gi|228644773|gb|EEL01023.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST26] Length = 292 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 1/151 (0%) Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +F + +IA+ ++ A + G P + L V+ ++ + Sbjct: 133 KIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLVLAVMIFLLGL 192 Query: 254 IPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G IS + I G + + ++ + + L P + LP T Sbjct: 193 IPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMSAKTNLPIFYT 252 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L+ +G+ GL IG + + + Sbjct: 253 FMILIFSEHFLGIWGLIIGIPIFIFLLDVLD 283 >gi|167772872|ref|ZP_02444925.1| hypothetical protein ANACOL_04260 [Anaerotruncus colihominis DSM 17241] gi|167664805|gb|EDS08935.1| hypothetical protein ANACOL_04260 [Anaerotruncus colihominis DSM 17241] Length = 367 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 114/326 (34%), Gaps = 9/326 (2%) Query: 24 LYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 LYFL + P+ L I + P + K A+I+ + L L Sbjct: 29 LYFLVRYLLVWTLPLFFGLAIAALTRPAALTLTKKTRLGEKSAAIISLLLFYLLAAALLG 88 Query: 80 FLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLKIL 136 + ++ EL+ ++ VL Q+ P+ L+ G+ + L Sbjct: 89 LFLTILLAQLYELLDRLPVLYTQNIAPLLDRLAGWFYGLAGRFDPGAEEGLERFSQAVSD 148 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + +G + A+ ++ +F I+ + ++ + SL + Sbjct: 149 AVRQAAVDGSAHLVTIAAGVAAKLPMLLITAVFSIVVSILTAANYRAVGAAVCSLVPKRW 208 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP- 255 ++ R + + I I+ + L L G + + + A++ ++P Sbjct: 209 QPRVRETQRFLRETIWKLVRAYIILLAITFVELSLGLGLLGFDYVLPVAAVIAMLDILPL 268 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G L+ G++ L + ++ L P +VGG I L + T Sbjct: 269 VGTGTILVPWGAALIAGGDM-PGGIGLLLLFGVIEVLRNILEPRIVGGQIGLHPIVTITS 327 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 + G++ G G+ PV++ L+ + Sbjct: 328 MYAGLKIAGFAGMLAAPVVVMLVRHL 353 >gi|297570507|ref|YP_003691851.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] gi|296926422|gb|ADH87232.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] Length = 351 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 114/347 (32%), Gaps = 23/347 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTS-----WPIYSSFISKKE 56 R +PQ ++ ++ I + L F AP+L+A+II + W Sbjct: 10 RRYFSDPQAVILTFLLLIGTLVLLFFGRMLAPLLTAIIIAYLLEGPIAWMEDKGVRRIVG 69 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S L + V I PLL+ KEL + Q + +P I Sbjct: 70 VSFVLLLFVVLALVGSFAIFPLLWA--QIADLFKELPHYIARGQQVLLALPERYPAISE- 126 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + T + T G + + + + ++ + +FF Sbjct: 127 -----------DQVREIVNTVRTQVGTLGQRMLAISLASV-ANLITLLVYLVLVPFLVFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D I + + A + + + + + G + G+V + L Sbjct: 175 LLKDKKIILEWVSLRLPRERSA-AQYLWHDLDVQMGNYVRGKFWEILIVGVVTYLCFALL 233 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATC-LFLWGAIELFIVDK 294 GV + L +T + +IP GA + V++ + + + L + + + Sbjct: 234 GVDYALLLATLTGLSVLIPYVGAVVVTIPVALIGYFQWGMGSELFWLLVIYGVIQGLDGN 293 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P L + L + ++ G G+F L L+ + Sbjct: 294 VLNPLLFAKVVNLHPVAIIAAILVFGGLWGFWGIFFAIPLATLVNAV 340 >gi|160881956|ref|YP_001560924.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] gi|160430622|gb|ABX44185.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] Length = 344 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 131/349 (37%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + + + + +L F P L A I + P+ K + Sbjct: 1 MKLSKNKRKLLLTAGTIIAVYIGMKYLLPLFVPFLFAYFIAWLLRPVVGFLHRKLKIPLV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ + V L +L ++ + + + Q+ + ++ Sbjct: 61 VGGGFGVLLLLLVISVILCYLGRILFNQVVLFLRNIPIYQQYFTQQVEIICVTGDKLFGF 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L ++ L + +++ N + + + + ++ + +++A +D Sbjct: 121 KDGSLKLVVNDGMETLVK-YVQMNILPKMTVQTIKLAIGLAEFLAIFLIILVATILIIKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L + F KI++ + + I+ ++ +++ P Sbjct: 180 ---MEEYKVGLRKSEFYPAVHKITQKLSDTGIAYMKTQMILMSIIAVINAVGFFILKNPY 236 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +G+ I P G+ + +I +L++ +A + + IV + L P Sbjct: 237 ALLIGLAVGIFDGFPVLGSGLILIPWTIVMLLQKKFMHAAVIMSIFLLCQ-IVREILEPK 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+G I + + + + GV+ G++G F+GP+ + +I + Sbjct: 296 LLGDKIGVKPIYSMIAMYVGVQLFGVIGFFLGPLSLVIIKTVIATYAEE 344 >gi|326693483|ref|ZP_08230488.1| permease [Leuconostoc argentinum KCTC 3773] Length = 332 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 113/344 (32%), Gaps = 27/344 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + R+ ++ I+V ++ L+ F + +L I + + + S Sbjct: 5 ATVKNRRFYRYFVLLAIVVLIFLLRQFMSLLLLTTIFSYLALNAGKRVQRIFKLSRGVA- 63 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++IV + FL + L+ +V L+ P L Sbjct: 64 ------ISLVYIVFVGFLIWAIDHGANTLIHQVKSMI--------VLATDPSWRSHGILK 109 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + Q S + T + I + + L S IF I Sbjct: 110 EVYKNFHQYTNSFSTEQILTKALSQINQLGHIIYELILALLFSFIFCITY--------PQ 161 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + ++ + I+ + I F +I + + + P Sbjct: 162 LRNWSLHFLHSPYKKFFGEFYIILHRFIIILGRLFEVQLLICVINTAAMVAVLAFLQFPY 221 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ I+ +IP G +S ++I I GN + + A+ F+ L P Sbjct: 222 LLGFTIMIFILGLIPVVGVLVSLVPLTITAFIIGNWHTVLVILIAVAVIHFLESYFLHPH 281 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +P L L+ + G+ GL IG ++ + +K Sbjct: 282 FMSHRTHMPILVILLNLIIMEKLFGVWGLVIGLPILTFLLDFFK 325 >gi|160914220|ref|ZP_02076441.1| hypothetical protein EUBDOL_00230 [Eubacterium dolichum DSM 3991] gi|158433847|gb|EDP12136.1| hypothetical protein EUBDOL_00230 [Eubacterium dolichum DSM 3991] Length = 368 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 120/319 (37%), Gaps = 11/319 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + P L L+I + +P F+ +K S VS++ L+ V + FL Sbjct: 47 WVAIVLSIIKPFLIGLVIAYVMYP-MVRFLQQKGLSKN-------VSIVLLWGVAIAFLA 98 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ M L K+ W+SD + E ++ + +++ + + Sbjct: 99 ILLIVLMPLLYDKISGFIVSMTEGVLWISDKIKEIGQFENFSLIDNLTKNIINMISAY-- 156 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + +D +I F II + D +I + S LFP+ +K Sbjct: 157 EGWLPQFVATLPNIMSVLVDSVTTIGFSIIIAIYMLADFKTIRHNIKSTFVALFPSS-EK 215 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + M +I + + + Y+L G P V +G+++++ ++IP Sbjct: 216 YLYEIDENVTVYLKSMIVIMLIKLFEYWAFYYLIGHPDWVIIGILSSLGSLIPYLGGTIA 275 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ I + + L L + + + P + + L T F + G Sbjct: 276 NSIGIITALTLSPLRILLLLLGIFVLSHMDAYVISPLVHEKRSAVGPLVTLFVIFAGGVI 335 Query: 323 MGLLGLFIGPVLMALIAVI 341 MG +G+ + + +I I Sbjct: 336 MGWVGIMLAMPVAIIIKTI 354 >gi|283833213|ref|ZP_06352954.1| permease, PerM family [Citrobacter youngae ATCC 29220] gi|291070846|gb|EFE08955.1| permease, PerM family [Citrobacter youngae ATCC 29220] Length = 344 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 112/328 (34%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL I P+ + K Sbjct: 7 TLNGLKIVIMLGMLVIILSGIRFAADIIVPFILALFIAVVLNPVVQRMV-KLRIPRVLAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ L ++ L +L N+ +P++ S + + E W Sbjct: 66 SLLIVIIVMLMVLLLAYLGTSL--------------NELARTLPQYRSSLVIPLKNLEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S+ L + + + ++ SI +++ + F + Sbjct: 112 LQRAGIGVSVDELVKYIDPNAAMTLVTNLLAQLSNAMS----SIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + P + + + T I+I GLV V Sbjct: 168 LPGKLQQMMSR--PIEGMAAIQRAIDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ +L+ +++A + + + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAAIPPIAQVLVFSGLYDALVVLAGYLVINLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|109900570|ref|YP_663825.1| hypothetical protein Patl_4272 [Pseudoalteromonas atlantica T6c] gi|109702851|gb|ABG42771.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 374 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 92/313 (29%), Gaps = 20/313 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W++ +L +LYF + P++ +I P+ ++ ++ ++ Sbjct: 18 WLLFLGVLYTLYFTQSLLMPLVVTSLIALLLSPLVAALQGLHIPR-----TVSAFLLVST 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I P FL ++ V QH +SD G S L K S Sbjct: 73 LIAPFTFLGAELAEPAQKWAKLVPELTQHVTEQLDSISDAMEGENESNLPAKADDEEFSF 132 Query: 134 K------------ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 E + ++ +I F G Sbjct: 133 FGLFKNKAEQRPVEKDENVMSQRLKQGGLEIMLSVLSSTPLILAQLMTGVILTLFLLIFG 192 Query: 182 FSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + K + + ++II G GL +L G+ Sbjct: 193 PQLFEAFIQHFPKITDKDQARCLVATIQKELSRYIVTVSIINAGLGLSTAFVLYLIGIED 252 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GV+ ++ IP + L+ G A I + + P Sbjct: 253 ALLWGVLAGLLNFIPYVGSLIGATILTLAGLVQFGVQVTALIPPAVYFGLNLIESQFITP 312 Query: 299 FLVGGPIKLPFLP 311 ++G ++L L Sbjct: 313 TVLGRNMQLNPLI 325 >gi|88859912|ref|ZP_01134551.1| hypothetical protein PTD2_17910 [Pseudoalteromonas tunicata D2] gi|88817906|gb|EAR27722.1| hypothetical protein PTD2_17910 [Pseudoalteromonas tunicata D2] Length = 362 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 86/239 (35%), Gaps = 3/239 (1%) Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +S L Q R + + + +W ++ ++ + E L+ + Sbjct: 76 MSLAGLVGQSLNDFSRNIPEYKIKLQQEFVWAVEVAAKYNILLNKEQILELFDPGKVIDM 135 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 AS ++ +I+ + F + I +++ + P + + + Sbjct: 136 ASNMLAGLGGVMANLFLIILTVVFMLFEAPVIGKKVHLALDD--PQMKMRQIDRFLESVN 193 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLI 271 + T++++ G+++G W+ V V GV+ + IP G+ I+ + LI Sbjct: 194 AYLAIKTLVSLATGVLVGLLLWILSVDYFVLWGVLAFMFNYIPNIGSIIAAVPAVLLALI 253 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 A + ++ + P +G + L L F L+ +G +G+ + Sbjct: 254 LQGPAVAGMVGFGYIAINTVMGNVVEPKYMGRGLGLSTLVVFLSLIFWGWLLGTVGMLL 312 >gi|330504109|ref|YP_004380978.1| hypothetical protein MDS_3195 [Pseudomonas mendocina NK-01] gi|328918395|gb|AEB59226.1| hypothetical protein MDS_3195 [Pseudomonas mendocina NK-01] Length = 354 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 116/329 (35%), Gaps = 16/329 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L G APVL+ L++ F + + K + ++ T+ + L + +L Sbjct: 29 FAVVLTLGGMLAPVLTGLVLAFLMQGLVNGLERLKVPQVLAVWLVFTLFLGGLAVF-MLV 87 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ L +++ PR ++ +L + L ++ Sbjct: 88 LMPLLWQQLSTLFNEL----------PRMAAEWQSVFLLLPERYPNLITDAQIVQLIDSM 137 Query: 141 LKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G + F+ + + + ++ + I +FFF +D ISQ S A Sbjct: 138 RGEAGKFGQWALSFSLSSLPVLVSVMIYLVLVPILVFFFLKDREQISQWFRSYLPR-ERA 196 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 ++++ + + I + G I I G+V A+ G+ L ++ + ++P G Sbjct: 197 LITQVAQEMNQQIANYIRGKFIEIIICGVVTYIAFAYLGLNYAALLALLVGLSVVVPYIG 256 Query: 258 APISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 A + V++ L + L + I + L P L + L + + Sbjct: 257 AVVVTVPVALIGLFQWGWSDQFLYLMVVYGIIQALDGNVLVPLLFSEAVNLHPVAIICAV 316 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G G+F L L + Sbjct: 317 LLFGGLWGFWGVFFAIPLATLFKAVINAW 345 >gi|109899216|ref|YP_662471.1| hypothetical protein Patl_2909 [Pseudoalteromonas atlantica T6c] gi|109701497|gb|ABG41417.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 372 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 81/212 (38%), Gaps = 4/212 (1%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++++ + L A+ + + +++ + F + S +++ Sbjct: 114 NIQLNQDQLLSYLDPGAAMNMATSLLTSLGGVLTNFLLILLIVVFMLFEAESFPRKIHIA 173 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + P + +++ T++++ GLV+G + GV ++ ++ ++ Sbjct: 174 LDD--PNMKMRQIDKFLLSVKNYLAIKTLVSLATGLVIGLWLYFLGVDHYLLWAMMAFLL 231 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP G+ I+ + L++ A L + ++ + P +G + L L Sbjct: 232 NYIPNIGSIIAAIPAVLLALVQLGPGVAGLTALGFVVTNTVMGNIVEPRYMGRGLGLSTL 291 Query: 311 PTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 F L+ +G +G+ + P+ M + + Sbjct: 292 VVFLSLIFWGWLLGTVGMLLSVPLTMIVKIAL 323 >gi|297571569|ref|YP_003697343.1| hypothetical protein Arch_1004 [Arcanobacterium haemolyticum DSM 20595] gi|296931916|gb|ADH92724.1| protein of unknown function UPF0118 [Arcanobacterium haemolyticum DSM 20595] Length = 423 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 67/339 (19%), Positives = 123/339 (36%), Gaps = 22/339 (6%) Query: 13 RWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 R +++ I+L + +L V+ AL++ P+ S S A IA + Sbjct: 27 RLIVVTIVLAGIGWLSFQFYTLIISVMVALLLAVILEPLASGLSKHLRFGSGLAAAIALL 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ V L++ G++ VS + A I G + +E W Sbjct: 87 TLLAFLSV-LIWGSSVGIISGVSEVSDQIRAGVSSIVQEVTQRFPNIGAYVNEAWNSLQG 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T I G + ++ LFFF +DG + + Sbjct: 146 TL------------TTNSGRILGGVVAVGSTVTSLITGFVLVLFTLFFFLKDGRRLWHWM 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL--GV 246 L + + ++ + I+A+ + + + + L P +A GV Sbjct: 194 VRLLPLQYQNSANEAGIRAWVMVGNYTKTQAIVALVDAVGIAAIALLLNTPFSLAFPIGV 253 Query: 247 ITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I + A +P F AV I L+ + F A + L + I L+P L G Sbjct: 254 IVFLAAFVPIVGAFVSGFVAVIIVLVNTQSFFMAAMMMLGILVVQQIEGNLLQPVLQGNA 313 Query: 305 IKLPFLPTFFGLVGGVRTMGLLG-LFIGPVLMALIAVIW 342 + + L + GG G++G LFI P++ A+ A++ Sbjct: 314 LNIHPLAIVLIVAGGSSVAGIVGALFIVPIVAAVNAIVL 352 >gi|227511994|ref|ZP_03942043.1| permease [Lactobacillus buchneri ATCC 11577] gi|227084802|gb|EEI20114.1| permease [Lactobacillus buchneri ATCC 11577] Length = 320 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 75/221 (33%), Gaps = 8/221 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG+ I R+ + G +++ +I FFF + ++ + F +++ Sbjct: 100 KNGVSLIWRYITGVGT----MGITLFLSMILSFFFAIEKKTMYNFSHLFLDSDFSWFFQD 155 Query: 203 ---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + IAI ++ +P L ++ I+++IP G Sbjct: 156 LYFFGKKFVATFGVVIEAQFFIAIVNTVLTTIVLAFMHLPQLAVLALMVFILSLIPVAGV 215 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ISF +S+ G + + L + + + L P + LP TF L+ Sbjct: 216 IISFIPLSLVGYSVGGLQDVLYLIITIVVVHALEAYVLNPNFMASKTNLPIFYTFVVLLV 275 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+ GL G + + I K + Sbjct: 276 GEHFFGVWGLICGVPVFTFLLDILGVKRHNEPLPPAKPDTK 316 >gi|323699207|ref|ZP_08111119.1| protein of unknown function UPF0118 [Desulfovibrio sp. ND132] gi|323459139|gb|EGB15004.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans ND132] Length = 377 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 102/309 (33%), Gaps = 15/309 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ L +L G P ++AL++ + P+ + + ++ + ++ +L Sbjct: 26 MVWLLDYLSGVLVPFVAALLVAYLLNPLTCWVERRV-GNRGVAVLLTMLLLLAAVAGVVL 84 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + E + + + + + +P +WA + P+ + + Sbjct: 85 LVVPMMVKEFAHMGQVLSRLVSNTEFADKVAAHLPPDIWA--WVRETAQSPEVRDLFTAQ 142 Query: 140 FLKTNGIDFIPRFASRFGMIFLDY------CLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + +++ + F D I Sbjct: 143 GALNAARTVLGNVVPGIRGVAVGAINAAAGLFGVFVILLYVIFLLADFGRIKAGWQDYLP 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + F G I+ + G+++ + L G+P + +G++ I+ + Sbjct: 203 ASYREGVVGFLDEFERTMGLYFRGQIIVCLLVGVLMSVGFVLIGLPLGLVMGMLIGILNI 262 Query: 254 IP-----GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL 307 P G P+ F A L +I+ L + + ++ D L P + G + L Sbjct: 263 APYLGVAGAVPVLFLAGLNSLEAGESIWLGIGLAVLVMGVVQVIQDAVLVPKIQGESLGL 322 Query: 308 PFLPTFFGL 316 L Sbjct: 323 SPWLILLSL 331 >gi|91224927|ref|ZP_01260186.1| putative permease protein [Vibrio alginolyticus 12G01] gi|91190173|gb|EAS76443.1| putative permease protein [Vibrio alginolyticus 12G01] Length = 356 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 121/344 (35%), Gaps = 34/344 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF K P++ + I P + K + TV + F+V + Sbjct: 25 GLYFAKPILLPIVLSTFISLLCSPFINYLEDKGLPRA------ITVVLTLSFLVGASIIG 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS------LKIL 136 M E P +W S++P + ++ + L I Sbjct: 79 LAAMSE----------------PAKQWWSELPSIVKNVSQEVSEVTKASADHLNTPLNIA 122 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ + G + + + ++ ++F G S+ ++ S Sbjct: 123 NDMSMDEVGNNTVFSLVKTLATTTPTILTQAMIVLFMVYFMLNHGRSLFRKSVSYLHGFA 182 Query: 197 PAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + K + +T++ G GL +G+ +++ G+ G +M P Sbjct: 183 KQRQAIELVKALQKDLSRYIGTITLVNAGLGLSVGAVFFVLGLEDPFLWGAFAGVMNFAP 242 Query: 256 GGAPI---SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P+ YL ++ F T + ++ + I + + P L+G L L Sbjct: 243 YLGPVISMVSFGFVAYLQLESVSFMLTVVSIY-LLLNLIESQFVTPTLLGKRFNLNPLVI 301 Query: 313 FFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEK 355 F LV G +GL IG P+L+ + ++ + + +N+ K Sbjct: 302 FVWLVFWGWLWGGMGLLIGVPLLVCINILVDRLELCQSTQNQAK 345 >gi|116628720|ref|YP_813892.1| permease [Lactobacillus gasseri ATCC 33323] gi|116094302|gb|ABJ59454.1| Predicted permease [Lactobacillus gasseri ATCC 33323] Length = 349 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-F 61 E + R + +I++ LY + +L I + + K + Sbjct: 6 EKFKKNTNVHRLATLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKLPNLPSQV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+A + V+ + + + ++ ++ ++ Q W ++ Sbjct: 66 IVVLAYLLVIAIIYFAITIYMPILIKQIVKMSHSLMEFYQSD-----------NMDWLTQ 114 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++S + +G+ + + G + + + +S+I Sbjct: 115 YLNHYISDSEITTQ------AKHGVTILVHALTNVGTLTIAFFMSLIMSFFYTIELDSMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+S IA+ + + +P Sbjct: 169 EFSHTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMKMPQI 228 Query: 242 VALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I+++IP G IS +S G I +F+ I I L P Sbjct: 229 IALGLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRYVIYIFIVIMIIHAIEAYILNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G +G GL +G + + I Sbjct: 289 MSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|227509087|ref|ZP_03939136.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191474|gb|EEI71541.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 320 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 75/221 (33%), Gaps = 8/221 (3%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 NG+ I R+ + G +++ +I FFF + ++ + F +++ Sbjct: 100 KNGVSLIWRYITGVGT----MGITLFLSMILSFFFAIEKKTMYNFSHLFLDSDFSWFFQD 155 Query: 203 ---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GA 258 + IAI ++ +P L ++ I+++IP G Sbjct: 156 LYFFGKKFVATFGVVIEAQFFIAIVNTVLTTIVLAFMHLPQLAVLALMVFILSLIPVAGV 215 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ISF +S+ G + + L + + + L P + LP TF L+ Sbjct: 216 IISFIPLSLVGYSVGGLQDVLYLIITIVVVHALEAYVLNPNFMASKTNLPIFYTFVVLLV 275 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+ GL G + + I K + Sbjct: 276 GEHFFGVWGLICGVPVFTFLLDILGVKRHNEPLPPAKPDTK 316 >gi|325970710|ref|YP_004246901.1| hypothetical protein SpiBuddy_0880 [Spirochaeta sp. Buddy] gi|324025948|gb|ADY12707.1| protein of unknown function UPF0118 [Spirochaeta sp. Buddy] Length = 410 Score = 62.5 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 108/331 (32%), Gaps = 19/331 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + IL L K P++ + P+ K F ++ + Sbjct: 18 ILAVLAILAVLKVSKDVTIPLVLSFFCFLLFSPLLRRL-DKLHIPKIFSVTFVMALLLFI 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++ ++ ++ + LV + + + + R +S L T LS Sbjct: 77 FVL----AGWFVIMTVDTLVRLIPFYAEKVVSLDRLISSRVSTFVDLPLGTSFLS----- 127 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L N + FLD + I F + S+ +L + Sbjct: 128 ------LLPVNWSSLAISSLTSISNKFLDITKVATLVYIFFLFLLLERQSVIPKLLAAIP 181 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + I L +I+ GL A + G+ + GV+ + Sbjct: 182 KSKGMKIAVMFERITRQISKYLLLKAVISAFTGLFFFLAAIVTGLDLPILWGVLAFVFNF 241 Query: 254 IPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + T ++I++ + + N + + I+ + P L GG + L Sbjct: 242 IPSVGSVIVTTLTIFMALIQFAPDWTNVMYVGILTISTQMILGNIIDPRLQGGQLNLSPF 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G+ G+FI L +++ ++ Sbjct: 302 VILVSLSLWGFIWGIPGMFISVPLTSVLQIL 332 >gi|271968022|ref|YP_003342218.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270511197|gb|ACZ89475.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 432 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 111/334 (33%), Gaps = 29/334 (8%) Query: 2 RETMLNPQGIMRW----MIMFIILVSLYFLKGFFAPVLSALII--------GFTSWPIYS 49 R T L P+ ++R + + II ++++ F +L +I+ +P+ Sbjct: 7 RLTQLVPRTLLRLAAWSLCLIIIGWAVFYFAQFI-AMLRIVILPVAVALLLTALLFPVTR 65 Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + + + + + F+ E LV +V ++ V W Sbjct: 66 RL-RAMGMRPIYATWVTLLIALAVLGGIGWFIGVRANDEFPGLVDQVRATSKT---VEDW 121 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L P + S+L S I T + I + + L+ SI+ Sbjct: 122 LYTGPLHLQPSQL---------SKWIDEIAVQVTTQRNQITQTVLTGATVALEVLASIVL 172 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 ++ FF +DG I P + R + G +A G+++ Sbjct: 173 LLFVTFFLLKDGDRIWAWFLRAFGGTAP-RVDRAGRAAWVTLSHYVQGTVAVAGVHGVIM 231 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G GVP L V+ + + IP G + ++ L A +E Sbjct: 232 GIVLAGMGVPLWAPLAVLIFLASFIPIVGIFFAGAVATLVTLGAKGPIYALIFLGILVVE 291 Query: 289 LFIVDKTLRPFLVGGPIKLPFL-PTFFGLVGGVR 321 + + L+P +VG + L VGG+ Sbjct: 292 QQLENHVLQPLIVGRALSFHPLAIILVLAVGGIL 325 >gi|317968134|ref|ZP_07969524.1| hypothetical protein SCB02_01226 [Synechococcus sp. CB0205] Length = 357 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 106/297 (35%), Gaps = 15/297 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A + A +I F + + +++++ ++ + L ++ L+L + Sbjct: 34 LAPFPALFVGAALIAFLLD-LPTRWLARRGLPRGLAVLLVVGLSLTLLVLAALWLVPRLI 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ EL++ + P WL + G + E+W P LS T Sbjct: 93 EQLGELINSL----------PSWLVEAEGVLDRLEVWAADRGLPTEFTDLSSTLFARASQ 142 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR- 205 + S+ + L + + ++ + + + P + + Sbjct: 143 --LASQLSQRALGILGATVGLTVNVVIVAVLALFLLLGGDPIVAGLARWLPEGTRTLVTG 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + R F G ++A+ + + L G+P V V ++P + ++ V Sbjct: 201 TLNRTFRGYFAGQVLLALILSALQIVVFTLLGIPYGVLFAVAIGFTTLVPYASALTIVLV 260 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 S+ L + + + + +VD+ ++P L+G + L L G R Sbjct: 261 SVLLALD-DPRTGIEVLVAAISVGQVVDQVIQPRLMGSIVGLQPAWLLVSLPVGARV 316 >gi|212212870|ref|YP_002303806.1| riboflavin transporter [Coxiella burnetii CbuG_Q212] gi|212011280|gb|ACJ18661.1| riboflavin transporter [Coxiella burnetii CbuG_Q212] Length = 363 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 120/342 (35%), Gaps = 34/342 (9%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + PV+ ++++ + + + AV +++LF+ G Sbjct: 41 FFGKYLLPVVISVVLAYLFASPVRWLERWRFPH--WAAVT------------IVYLFFLG 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++ Q + + + P + + W H ++ N Sbjct: 87 IFLLALFGLLPLMWKQ----LASMVHEFPKAITKGQAWMTEYMHRYPKLFPTDPI--ANL 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMII-----------ALFFFYRDGFSISQQLDSLGEH 194 ++ + ++R G L + L+ I II +FFF +DG SIS L Sbjct: 141 AGYLHQQSARIGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGGSISNWLSRFLPE 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + I + G I I +V A+ L + LGV+ + ++ Sbjct: 201 RQGL-IRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFALLRLQYAFLLGVLLGLSVIV 259 Query: 255 P-GGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P GA + ++I L++ G + L + AI + + L P L + L + Sbjct: 260 PYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLLFSEAMDLHPIVI 319 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+F L L+ + A E Sbjct: 320 ILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNE 361 >gi|254360569|ref|ZP_04976718.1| possible membrane protein [Mannheimia haemolytica PHL213] gi|153091109|gb|EDN73114.1| possible membrane protein [Mannheimia haemolytica PHL213] Length = 350 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 108/313 (34%), Gaps = 18/313 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L +L I P+ +K +LA+ + V L L + + E Sbjct: 28 VVPFLLSLFIAIICSPMIKFMTKRKV--PLWLAITILLIVFILGFSFLAGIINNTLQEFT 85 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + I V L+ H+ S + + F ++ ++ + Sbjct: 86 NAIPQYKIQLSSRIQVILELAH-----------RWHIPLTLSQEEIMSKFDPSSIMNLVS 134 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + + +I L + ++ +L + K+ V + Sbjct: 135 KLLMGLSGALSNIFVIFLVVIFMLLEMPVAKYKLA---LALSPDDDLSNEKEYINQVLEG 191 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + T +++ G ++ + GV + ++T ++ +P G+ ++ + I Sbjct: 192 VIGYLGVKTFVSLLTGGLVWILLEILGVEYAILWAILTFLLNYVPNIGSILAGIPIVIQA 251 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ + + +V L P L+G + L L F L+ +G +G+ Sbjct: 252 LVLNGFSIGLGTLIGIVVINMVVGNALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGML 311 Query: 330 IG-PVLMALIAVI 341 + P+ MA + Sbjct: 312 LSVPLTMACKVAL 324 >gi|329935750|ref|ZP_08285555.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329304841|gb|EGG48714.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 341 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 95/281 (33%), Gaps = 19/281 (6%) Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + A + V+V+ + L + + ++V V A Q Sbjct: 56 HRRLVG-VGVHRSLSAFVTCVAVVAVVGGALFIVVSALVDNGAQIVDSVRRAAQS----- 109 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 ++ + SL + G + + G I + + Sbjct: 110 -----------LTDRLGSSGTSVDSLSEEARKLAGRFGGSAVSGVVTGVGYIS-ETVATA 157 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + ++ +FFF RDG L L + + ++R + + G T IA+ + Sbjct: 158 VLALLLVFFFLRDGDRAVSGLRGLSPYGSADTVEAVARRAFRAVEGFMRGTTFIALIDAA 217 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 ++ + VP V LG + + A IP AV++ + F L + Sbjct: 218 LITAGLLGLRVPGAVGLGALVFVGAYIPYLGAFLSGAVAVLVAFADRGFAVAVWALGLIV 277 Query: 288 ELFIVD-KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + +++ L+P + +++ L G G+LG Sbjct: 278 AVQLIEGHVLQPVIQSRTVRMHPAVVLVALAAGASVAGILG 318 >gi|255101166|ref|ZP_05330143.1| hypothetical protein CdifQCD-6_10184 [Clostridium difficile QCD-63q42] Length = 363 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 119/356 (33%), Gaps = 11/356 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----FISKKEES 58 + ++ + + +IL L L + VL + F + + K Sbjct: 8 SYQNKQRFLINFCYLVVILGLLMLLGKYAFSVLLPFVFAFLIASLLNKPVLYISEKLLIK 67 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWL---SDIP 114 +A I+ + + + + Y + +KE+ + + + IP+ + ++ Sbjct: 68 RGIVATISVFLFFLIAGIIVSVIGTYLIYGIKEIFHFLPTMFEELVIPLTETVIKEVELF 127 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G + ++ L F+ + + + + L + + I I+A Sbjct: 128 SGSFNFSFIELIEANMPVLMNEMSVFIVSLSNNIVSGITDIVSSVPLLF-MKTIITIVAS 186 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F D +I + + + I +I L + Sbjct: 187 IFIAIDYPTIKRFIVLQIPKNKSYLLAEAKAFTIDTIIKCGFSYLLIFAITFSELYVGFA 246 Query: 235 LAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + + + + A++ ++P G I L G+ A + L + I Sbjct: 247 IINISYAGIIALFIALLDILPVLGTGSILIPWGIISLFLGDYSMALGIALLYIVITIIR- 305 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + P LVG ++L + ++ G+ G +GLF +L+A + + + I+ I Sbjct: 306 NIIEPKLVGKHMELHPVLALASMLTGLHFFGFIGLFGILLLIAFLKKLNDKEIIHI 361 >gi|330808075|ref|YP_004352537.1| putative permease protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376183|gb|AEA67533.1| putative permease protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 356 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 111/344 (32%), Gaps = 18/344 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLA 63 + + ++ +++F+ ++ L G APVL+ +++ + + ++ + + + Sbjct: 15 DEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVTTLERLRLPGAVAVGLVF 74 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ IV + L++ + EL + + +P + + Sbjct: 75 ALFMGLLLVFIIVIVPLLWHQLVTLFNELPGMLAKWQSVLLLLPERYPHLVSDEQVLQAI 134 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + F+ + ++ + ++ + I +FFF +D Sbjct: 135 EVVRGQIGKF------------GQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDREM 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + + A ++++ + + I + G I G V + G+ Sbjct: 183 IGRWVRGYLPR-ERALITRVAQEMNRQIANYIRGKVIEIFICGGVTYIGFVALGLNYAAL 241 Query: 244 LGVITAI--MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ I + G ++ I L G L I + L P L Sbjct: 242 LALLVGISVVVPYVGTVVVTVPVALIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPLLF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + ++ G G+F L L + Sbjct: 302 SEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAW 345 >gi|288935653|ref|YP_003439712.1| hypothetical protein Kvar_2794 [Klebsiella variicola At-22] gi|290509681|ref|ZP_06549052.1| transporter tqsA [Klebsiella sp. 1_1_55] gi|288890362|gb|ADC58680.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] gi|289779075|gb|EFD87072.1| transporter tqsA [Klebsiella sp. 1_1_55] Length = 344 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 106/328 (32%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL + P+ + + Sbjct: 7 TLNGLKMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLVRCRVPR-VLAI 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ L IV L L + L + + WL + Sbjct: 66 SMLIGLIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRM---------- 115 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + K + + + + SI +++ + F + Sbjct: 116 --------GFTVSVVELNKYIDPNAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L L P + + + T I++ GLV+ L V Sbjct: 168 LPAKLQQLMSR--PVEGMGAIQRAIDSVSHYLVLKTAISLVTGLVVWGMLVLLDVRFAFM 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ + +L+ G ++ A + I + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRVMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|108763169|ref|YP_628600.1| hypothetical protein MXAN_0325 [Myxococcus xanthus DK 1622] gi|108467049|gb|ABF92234.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 386 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 90/290 (31%), Gaps = 14/290 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A I+ + + +A++ T ++ + + L + ++ LV + Sbjct: 71 ATILALALEHGVARLERGRLPRLAAIALVMTALLVVVAAL-ALLVIPAAADQLDALVRQW 129 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 P+ + ++ L + + + + E +P R Sbjct: 130 ----------PQLMEELRSSRPIQVLSDRLQALGWARR--LEEATPRLATGALPTLLIRA 177 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + +S + + + F G + ++ +L + ++ V Sbjct: 178 IGGVVGVVISALTVFFLVVFMLTFGGDLIRRGLALVGPEHRMRYVRVLHNVYSATGGYLS 237 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNI 275 G+ +I + L G+P + LG+ + +++P P+ V L I Sbjct: 238 GLALICTINATLTTVTLALLGLPYFLPLGIASGFSSLVPYVGPLIAGGVITLLTWATQGI 297 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + A + + + L P + + + L ++ G+ Sbjct: 298 WAAAVALAYFLLYGPLEGNVLAPLVFRRTVHVNPLLVLLAVLFCAELAGI 347 >gi|227872610|ref|ZP_03990945.1| sporulation integral membrane protein YtvI [Oribacterium sinus F0268] gi|227841550|gb|EEJ51845.1| sporulation integral membrane protein YtvI [Oribacterium sinus F0268] Length = 360 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 108/308 (35%), Gaps = 4/308 (1%) Query: 37 ALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 II F P+ S ++++ T+++ LF L G+ +K+ +S+ Sbjct: 24 GAIIAFCLNPLISFLQKSFPFLKKKQISLVLTLTIFALFFYLCFCLMQLGLPMLKQRISR 83 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + L Q + + + LS + +F+ + Sbjct: 84 LPLEIQDLKRQLEKMIEE-NLPYFPPFIQNLLSDLPGTLDSLGRTMMNKWTSPALQFSLQ 142 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + L +I I++ F ++G + L F Y + + K+++ Sbjct: 143 VVSGLPELFLYLIITILSALCFSQEGAKLLSILHRNIPEQFRKYMQLLKEDGKKILKGYV 202 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGN 274 I ++L + L V + L +TA + +P G +L+KG Sbjct: 203 WAQIQIMFCVFILLSVGFSLLRVELAIPLAFLTAFLDALPVFGVGFIMWPWMALILLKGK 262 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 L L + ++ + L+P ++G + LP L L G + G+ G+ + + Sbjct: 263 FLFFLALLLIYILSQ-MIRQILQPKIIGDAVGLPPLLALIFLFLGYKLYGISGMVLALPV 321 Query: 335 MALIAVIW 342 L+ + Sbjct: 322 GMLLVRFY 329 >gi|152970116|ref|YP_001335225.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894583|ref|YP_002919317.1| putative transport protein [Klebsiella pneumoniae NTUH-K2044] gi|330014336|ref|ZP_08307893.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] gi|150954965|gb|ABR76995.1| putative integral membrane transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546899|dbj|BAH63250.1| putative integral membrane transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328533203|gb|EGF59969.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] Length = 344 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 106/328 (32%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL + P+ + + Sbjct: 7 TLNGLKMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLVRCRVPR-VLAI 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ L IV L L + L + + WL + Sbjct: 66 SLLIGLIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRM---------- 115 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + K + + + + SI +++ + F + Sbjct: 116 --------GFTVSVVELNKYIDPNAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L L P + + + T I++ GLV+ L V Sbjct: 168 LPAKLQQLMSR--PVEGMGAIQRAIDSVSHYLVLKTAISLITGLVVWGMLVLLDVRFAFM 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ + +L+ G ++ A + I + L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRIMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|295424993|ref|ZP_06817702.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295065311|gb|EFG56210.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 345 Score = 62.5 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 108/336 (32%), Gaps = 27/336 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-FLAVIATVSVM 71 R ++ +I+ LY ++ +L I + + + T + V+ + ++ Sbjct: 16 RVVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIRLVQRYIPKMPTGIIVVVMYLIIL 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + ++++ ++V V+ + + T+++S + Sbjct: 76 ALLYFIITVYLPMLVVQISKMVKSVMAFYESD-----------ESLRLMSYVTRYISKGE 124 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ---- 187 ++ FA ++ +I FF+ + + + Sbjct: 125 LIEQAKHAM----------TFAFHTATNIGTLTIATFMSLILSFFYTIELKKMREFSSLF 174 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S + IAI + + +P VALG++ Sbjct: 175 VKSGYLKWLFEDICYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAIMRMPQIVALGLM 234 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I++++P G IS +SI G I +F+ I + L P + + Sbjct: 235 VFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKFMASKTE 294 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G GL +G + + Sbjct: 295 LPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFFLDVL 330 >gi|315636913|ref|ZP_07892137.1| permease [Arcobacter butzleri JV22] gi|315478743|gb|EFU69452.1| permease [Arcobacter butzleri JV22] Length = 345 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 118/336 (35%), Gaps = 25/336 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---TFLAVIATVSVM 71 + MF+++ S L P+ A I F + + +A+ ++ ++ Sbjct: 2 LFMFLVIYSFNSLSSILTPIAIAFFIWFLINALANEIKKIPFIKQKILNIIAIPLSLFII 61 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F++ + M+E+ ++S++ I ++ I + + + Sbjct: 62 IYFMIKVGAFITSSMIELSSIISQLDSKINIVIEKISIMTSIDLKDPLEKFFQE------ 115 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 F ++ ++ I S + L ++F++I FF + + Sbjct: 116 --------FNLSSALNKIFTAFSSIFSNLVQIFLYVLFLLIDQQFFNQKLNVL------F 161 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I V K +R+ L TI+++ G + + + G I I+ Sbjct: 162 SKEENRQKAEHILTSVSKGVRTYILITTIVSLVTGFLTFIICQYFSLQGAILWGFIAFIL 221 Query: 252 AMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I L+ + + LF I F+V + P L+G + + Sbjct: 222 NFIPTIGSIIAVLIPTIFALIQFTDYSDIVGLFTALVIIQFVVGNIIYPKLMGNKLNISQ 281 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV G +G+F+ +M ++ +I + Sbjct: 282 FVVILSLVIWGAMWGTIGMFLAVPMMMILLIILSQF 317 >gi|302750837|gb|ADL65014.1| putative permease [Staphylococcus aureus subsp. aureus str. JKD6008] gi|323440834|gb|EGA98542.1| hypothetical protein SAO11_0265 [Staphylococcus aureus O11] gi|323443877|gb|EGB01489.1| hypothetical protein SAO46_0300 [Staphylococcus aureus O46] Length = 338 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 114/330 (34%), Gaps = 13/330 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P L + + + P + + + K +++ + + + F+ + + Sbjct: 18 FLPFLISGFLFYICLP-FQNLLEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNIN 76 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+S+ + + ++ + E T +++ T + +N + +I Sbjct: 77 NLISQTPALQKEAEQIIKF--ALAQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYIT 134 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 S +I + L + +D + + ++ + + Sbjct: 135 SLISTI--------FLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLTDLNFT 186 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYL 269 ++S G +++ G+ L Y + +P L + + +IP G+ +SF +I L Sbjct: 187 LKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAPAAI-L 245 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 I + + + I + + P ++G + + L ++ G + Sbjct: 246 GIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLVL 305 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 I L A++ + + +K +SN Sbjct: 306 IAVPLYAVLKTVVSNIFKYRQRIIDKANSN 335 >gi|330940342|gb|EGH43449.1| lipoprotein [Pseudomonas syringae pv. pisi str. 1704B] Length = 78 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ + F++ ++ ++ F SWP+ + + A++ + M L PL++L Sbjct: 19 ACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWL 78 >gi|169350364|ref|ZP_02867302.1| hypothetical protein CLOSPI_01131 [Clostridium spiroforme DSM 1552] gi|169293147|gb|EDS75280.1| hypothetical protein CLOSPI_01131 [Clostridium spiroforme DSM 1552] Length = 361 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 124/322 (38%), Gaps = 22/322 (6%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + I F P + +FI K + ++ ++V + I+ +L + + E+ Sbjct: 55 PFIVGFTIAFVLNP-FINFIDKYLKKRAVSVILTYLAVFTILILIILLVIPLIYESIFEM 113 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 L +I + + + K + + F +D Sbjct: 114 YPTFNAG----------LKEIGRFIQNNFNYDISSLTSYIEKSVYQFFNDPTVLDATIDV 163 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL---FPAYWKKISRIVPK 209 ++ + ++ + +I I F SI Q + ++ + P Y K+I + + Sbjct: 164 LNQVLVNLTNFIIYVILAIYMSNIF----NSIRQTIKNIAIKIDCNLPIYLKEIDLSLVQ 219 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +++ F+G AI + + Y L G P+ + LGV++ + ++IP PI + + Sbjct: 220 YVKAFFIG----AIAQAITTMIMYVLIGHPNWLILGVVSGVSSIIPYVGPIIANCLGLIT 275 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + I+ ++ + P + I L L FG++ G G++G+ Sbjct: 276 SLGMQSSTIIFLCILIFIQSIVMSYIITPRIYSSRIDLSILWVLFGILSGSSLFGIVGMI 335 Query: 330 IGPVLMALIAVIWKESIMAIKE 351 I L+ I +I++ ++ Sbjct: 336 IAMPLLVSIKIIYQVYKEHHQD 357 >gi|325066380|ref|ZP_08125053.1| putative permease [Actinomyces oris K20] Length = 443 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 113/345 (32%), Gaps = 35/345 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I V LY ++ FAP AL + T P+ S + + Sbjct: 34 LTIGAVGLYLIQDLFAPAFFALTLVVTVRPLVSWMTRHRVPR---------------VVA 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + V Q +P++ +W + + + + Sbjct: 79 ATAAIVLIFAFVVLLFAALAVAVAQLVDTLPQY------APKFQAIWKQVETQLNGMGVD 132 Query: 137 SETFLKT-----NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 LK + + G + + + ++ +F + + ++ + Sbjct: 133 QSAVLKQVTNVLDTSQLVMVAQPVLGQLTSASAMMGVMSMVVVFLMF---DTAKIEIRTA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +RS ++ T+ + ++ W VP + GV++ I Sbjct: 190 ALGVLKPGMASALVSFCEAVRSYWMVSTVFGLIVAVINAVTLWYLNVPMAITWGVVSFIT 249 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP G + +I L+ + A + L F++ ++P G + L Sbjct: 250 NYIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYTAANFVIQSLIQPKFTGDAVGLNTT 309 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TF L+ G LG ++A+ ++ ++++ + + + Sbjct: 310 TTFLCLLFWSTVTGALG-----TILAVPLTLFVKALLIDSDPRSR 349 >gi|322833666|ref|YP_004213693.1| hypothetical protein Rahaq_2972 [Rahnella sp. Y9602] gi|321168867|gb|ADW74566.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 347 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 121/354 (34%), Gaps = 25/354 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+T++ QG+ ++M +++V +K P + AL + F P+ + Sbjct: 1 MRKTIVTTQGLKIVVMMAMLVVIFAGIKSAADIIVPFILALFLAFVLNPLIVLLEKWRVP 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ V+C+ + L + L L + W Sbjct: 61 RA-LAVLLVATLVICMMVFLTTKLLVTLNEFARTLPQYRGLIVDKLSDIEAWFPQ----- 114 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 ++ P+ L + N + + + S +++ FM++ + Sbjct: 115 ------SELTLSPEQLASYIDPAATLNMVSKLISYLSNAMAGLFLLLMTVAFMLLEV--- 165 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + +++ + E I R + V R + +I++ GL + + + Sbjct: 166 ----PQLPYKVEQMSED-PGKGMANIQRALDSVTRYLVIKT-LISVVTGLAVWALLAVTS 219 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + G++ + IP G+ I+ I + L + I + Sbjct: 220 IRFAFLWGMLAFALNYIPNIGSFIAAIPPIIQAFLFNGFSEGLILAGGYILINLIFGSII 279 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P ++G + L L F L+ MG +G+ + L ++ + + + K Sbjct: 280 DPKILGRGLGLSTLVVFMSLIFWGWLMGPVGMLLSVPLTIVLKIALEPTAAGHK 333 >gi|145636393|ref|ZP_01792062.1| hypothetical protein CGSHiHH_07946 [Haemophilus influenzae PittHH] gi|145270558|gb|EDK10492.1| hypothetical protein CGSHiHH_07946 [Haemophilus influenzae PittHH] Length = 348 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 122/346 (35%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E IP + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREF-----------TQSIPQYKVLLSQRVSDLTG 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I F + Sbjct: 108 LLQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVI----FMLAE 163 Query: 181 GFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ + + + + I R++ VI + ++ G+ + G Sbjct: 164 APTMKHKFAMVISSTPYDAAKEERHIDRVLQGVIGYLGIKSI-TSLLTGVGVFILLEACG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + ++ ++ IP G+ I+ + + L+ + + +V + Sbjct: 223 VQYAILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNII 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P ++G + L L F L+ +G +G+ + P+ MAL + Sbjct: 283 EPKMMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIAL 328 >gi|224499485|ref|ZP_03667834.1| hypothetical protein LmonF1_07202 [Listeria monocytogenes Finland 1988] Length = 347 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 111/337 (32%), Gaps = 25/337 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + P + G Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN--PSDNTIVKWIVGFLKESN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+L G+DFI S G + L + L++I + FF + Sbjct: 123 IQKYLQ---------------AGVDFIIASLSGIGSVGLSFFLALILSL----FFSLEKE 163 Query: 183 SISQQLDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ +K+ + +IA+ + A +L P Sbjct: 164 RVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ++L ++ ++ +IP I + + G + + + I I L P Sbjct: 224 QLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L+ LP TF L+ G+ GL +G + Sbjct: 284 KLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVF 320 >gi|146306691|ref|YP_001187156.1| hypothetical protein Pmen_1660 [Pseudomonas mendocina ymp] gi|145574892|gb|ABP84424.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 356 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 107/339 (31%), Gaps = 18/339 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE---SSTFLAVIATVSVMCLFIVP 77 + L G APVL+ L++ F + + K + + + + +V Sbjct: 29 FAVVLTLGGMLAPVLTGLVLAFLMQGLVNGLERLKVPQILAVWLVFALFLGGLTMFMLVL 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L++ EL + +P + +L Sbjct: 89 VPLLWHQLSTLFNELPRMAAEWQAVFLLLPERYPSLITDEQVVQLIDSMRGEAGKF---- 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + F+ + + + ++ + I +FFF +D I Q Sbjct: 145 --------GQWALSFSLSSLPMLVSIMIYLVLVPILVFFFLKDREQIGQWFRGYLPR-ER 195 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-G 256 A ++++ + + I + G I I G+V A+ G+ L ++ + ++P Sbjct: 196 ALITQVAQEMNQQIANYIRGKFIEIIICGVVTYIAFAFLGLNYAALLALLVGLSVVVPYI 255 Query: 257 GAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 GA + V++ L + L + I + L P L + L + Sbjct: 256 GAVVVTVPVALIGLFQWGWSDQFLYLMVIYGIIQALDGNVLVPLLFSEAVNLHPVAIICA 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+F L L + A E E Sbjct: 316 VLLFGGLWGFWGVFFAIPLATLFKAVLNAWPRAEPEAIE 354 >gi|212638587|ref|YP_002315107.1| putative permease [Anoxybacillus flavithermus WK1] gi|212560067|gb|ACJ33122.1| Predicted permease [Anoxybacillus flavithermus WK1] Length = 354 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 100/317 (31%), Gaps = 29/317 (9%) Query: 17 MFIILVSLYFL-------KGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + ILV LYF+ F P L A I + P+ + Sbjct: 17 LLFILVCLYFIVKLKSVWLPFLHVFIKIMTPFLIAAFITYLLHPVVEYVHKRGMPR---- 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A +S+ LF + F Y G+ ++++ N+ +P ++ W + + Sbjct: 73 -ALAILSIYALFFGGIGFAVYKGI---PLFIAQLEDLNKS---LPMFVRT--YEQWTNYI 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF--GMIFLDYCLSIIFMIIALFFFYRD 180 + ++ P + E + ++ + + F+ +D Sbjct: 124 HEETVTWPYDVHQRIEAMMTEVESFISEAVTGAIIGVKQLINRIIVFFIIPFIAFYMLKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + V + + G + G ++WL + Sbjct: 184 VELIKKAAWEWTPKKWRYKGMQFLHDVDQTLGGYIRGQLFVCFLIGTAAALSFWLIDMKY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG+I + +IP PI + + ++ + FI L P + Sbjct: 244 PLLLGIIVGVTNVIPYFGPIIGAIPAAIIAATVSVNKLLLTVGIVFLLQFIEGNILSPLI 303 Query: 301 VGGPIKLPFLPTFFGLV 317 VG + L L F L Sbjct: 304 VGKSLHLHPLMIMFSLF 320 >gi|158336300|ref|YP_001517474.1| hypothetical protein AM1_3162 [Acaryochloris marina MBIC11017] gi|158306541|gb|ABW28158.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 386 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 107/319 (33%), Gaps = 23/319 (7%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +W+ + + LVSLY L + +A+++ + + S A Sbjct: 2 SLGKWIGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKR-GLSRGLAVASA 60 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 S++ + + L + + + +EL+ +V P L+ I + ++ Sbjct: 61 IFSIVGVACLIGLLVIPPFVTQAQELLDRV----------PDSLTRIEELINEAQETGLA 110 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY-------CLSIIFMIIALFFFYR 179 P + + L N + IP FA F L+I+ +++ F Sbjct: 111 FGMPSAGIEIPVDSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILLILVLTIMFLV 170 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + L + I + + + +G+ + G W+ GV Sbjct: 171 DPDQYRRIFIRLFPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVD 230 Query: 240 SHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +A +I ++ IP G +S L+ + A + + + + L P Sbjct: 231 LVLANALIAGLLEAIPNIGPTLSLIPPMAIALLD-APWKAVAVLILYILIQQLEQYLLVP 289 Query: 299 FLVGGPIKLPFLPTFFGLV 317 ++ + L T + Sbjct: 290 AVMAKQLSLAPAVTLLSQI 308 >gi|170690529|ref|ZP_02881696.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144964|gb|EDT13125.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 690 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 103/337 (30%), Gaps = 20/337 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVMCLFIVPL 78 + LYF + P+ A+++ F P+ K S F AV+ ++SV+ + + Sbjct: 38 VACLYFARAVLIPMTLAILLSFLVAPLVKWLGRLKLGHVASVFAAVVMSISVIGVLGAVI 97 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 M + + + + D L + PQ Sbjct: 98 TMQLSDLAAGMPRYQATIERKMEAAHTLTVGKLDRFAKAAGQALQRATVEPPQPEPRHDA 157 Query: 139 TFLKTNGIDFIPRFA-------SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + +P L +S + +F L Sbjct: 158 SSSDGRAPAAVPVEVREPVPTPLEVARRVLSPAISPLETAFIVFVVMVVILLQRDDLRDR 217 Query: 192 GEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 LF + + + + F+ + G+ +G+ + GVPS + G++ Sbjct: 218 AIRLFGSRDLHRTTMVMDEAARRLSRYFVSQLGLNAALGVAIGAGLFFIGVPSPILWGIL 277 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD----KTLRPFLVGG 303 A++ ++P + A + + + + +W V+ + + P L G Sbjct: 278 AALLRLVPYVG--IWIAGGLATALAAAVSPGWDMAIWSIALFVTVELLVGQVVEPLLYGR 335 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 L + G +GL + P+ + L+ Sbjct: 336 STGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLV 372 >gi|323142132|ref|ZP_08076977.1| putative ATP synthase F0, A subunit [Phascolarctobacterium sp. YIT 12067] gi|322413392|gb|EFY04266.1| putative ATP synthase F0, A subunit [Phascolarctobacterium sp. YIT 12067] Length = 375 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 113/343 (32%), Gaps = 8/343 (2%) Query: 20 ILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIATVSVMCLFIV 76 +L +Y L F A I+ + + ++S S F + + + + I Sbjct: 29 LLAGIYDVLLPFVIGGCMAFIVNVLMKKLEQYWRIIFKQSVVSRFERPVCLLLSLAIIIG 88 Query: 77 PLLFLFYYGMLEMKELVSKVV-----LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L F + E+ + +V + I + + ++ + Sbjct: 89 FLAFFVLTIVPELHASMKMLVKMLPPALAKLNIYLQQKAQELSFSADELAVVQAQAKEVY 148 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + K ++ + + + + + I L +R + + + Sbjct: 149 QTMLNYLQNNKRLLLEQTFLATASLVEVLANCVIGFVVAIYCLLEKHRLVRNFKWVIFAF 208 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 AY + + ++ R G ++A+ G++ + L P + ++ A++ Sbjct: 209 CSKERAAYILHVLQTAEQIFRGFVGGQLVVALLLGVMYFVSMKLCSFPYATVISLLVAVL 268 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++IP + + +L++ + + I L P +VG + L L Sbjct: 269 SLIPILGTLISALIGCFLILVAAPEKIWYFIILYIVLQRIEADLLYPKIVGKAVGLSELW 328 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G+ + L +++ + E + + K Sbjct: 329 VLAAVTIGASLGGVAGMIVCVPLFSVLYALLAEKVKRLLAEKN 371 >gi|229051108|ref|ZP_04194654.1| hypothetical protein bcere0027_50600 [Bacillus cereus AH676] gi|229153599|ref|ZP_04281777.1| hypothetical protein bcere0011_51290 [Bacillus cereus m1550] gi|228630203|gb|EEK86854.1| hypothetical protein bcere0011_51290 [Bacillus cereus m1550] gi|228722237|gb|EEL73636.1| hypothetical protein bcere0027_50600 [Bacillus cereus AH676] Length = 303 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP G Sbjct: 144 EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVI 203 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G I + + + + L P + LP TF L+ Sbjct: 204 ISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFS 263 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 264 EHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 296 >gi|291296850|ref|YP_003508248.1| hypothetical protein Mrub_2477 [Meiothermus ruber DSM 1279] gi|290471809|gb|ADD29228.1| protein of unknown function UPF0118 [Meiothermus ruber DSM 1279] Length = 378 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 105/332 (31%), Gaps = 15/332 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI--VPLLFLFYYGMLEMKELVS 94 A + + + P+ F ++ + + V+ + L + V L + + L S Sbjct: 47 AFVFSYLASPVVRWFEQRRLTRALGVVVVFVGLLFFLGLATVLLAGMTTQLARFVNNLPS 106 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 V +P + I E + + Q+L L + + + Sbjct: 107 LVEPLVGWARGLPEQIGRIELPPVLLEALNQATLNLQTLLQAFTQTLLRGLQSLLAQGGN 166 Query: 155 RFG------MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 G I I L+ R G ++ + + + +K Sbjct: 167 LLGFFTGLLGGAFQLLTVITISIYLLYDLPRVGAALFRAVPLPYQPKVQELAQKADAAFG 226 Query: 209 KVIRSTFLGMTIIAIGEGLVLGS------AYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +R T LG + L + + + + ++LG + I + +P I Sbjct: 227 GYVRGTLLGALFNGVLISLAMYLSFGAFQGFGVGVLTQAMSLGFLAFIFSFVPVLGVIIS 286 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + L + + + P ++G L + ++ G Sbjct: 287 AIPALLLALPLGWLAFAVVALVLWVC-NQIQGVVWPIIMGRTTSLHPVTGIAAVLIGGSL 345 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G + L+A +++ + + + +E Sbjct: 346 FGVAGALLAVPLVAFFKILYNDYYLNSRFYQE 377 >gi|294140385|ref|YP_003556363.1| hypothetical protein SVI_1614 [Shewanella violacea DSS12] gi|293326854|dbj|BAJ01585.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 367 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 100/323 (30%), Gaps = 22/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ + K S AV+ + Sbjct: 18 KGFAIMAFIVVILAGIKTASPIVVPFVLSAFIAVICNPVIGAMTRFKVPRSF--AVLILM 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + + E + + W Sbjct: 76 VFIVMMGLWLAQIVGSSINEFSNQLPQYRDQLVDQFG-----------------WIVQKL 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ I E L + ++ +I+ + F + ++ ++L Sbjct: 119 QALNIIITKEQILAYFDPGIALSMTTNMLTGVGGVMANLFLIILTVVFMLFESQTLPKKL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T++++ G+V+G + GV + VI Sbjct: 179 HFALDD--PEMRMQQIDKFLHSVNQYMVIKTLVSLATGVVVGFGLAIIGVDYVLLWAVIA 236 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A L ++ + P +G + L Sbjct: 237 FLFNYIPNIGSIIAAIPSVLLAFIQLGPAAAGATALLYLGTNMVMGNLIEPRYMGKGLGL 296 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 L F L+ +G +G+ + Sbjct: 297 STLVVFLSLIFWGWLLGSVGMLL 319 >gi|170017118|ref|YP_001728037.1| permease [Leuconostoc citreum KM20] gi|169803975|gb|ACA82593.1| Predicted permease [Leuconostoc citreum KM20] Length = 331 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 107/341 (31%), Gaps = 27/341 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + R+ ++ +I++ + LK F +L +I + + S + + Sbjct: 8 QNRRFYRYFVLSVIILLIVLLKQFMTLLLLTIIFSYLAMNAGKRVQRVTRLSRSLSIALV 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + VM I + ++K ++ ++ Sbjct: 68 YIVVMAFIIWAVEHGANTVAHQVKSMIHLATDSS-----------------------WHT 104 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + + + + +I ++ F F + Sbjct: 105 TGIFKEVYKNIQQYSNSLNTEQLISKGFTQLNQVGHVLYELILALLFSFIFSMTYPQLRS 164 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ + IV + I F +I + + + P + Sbjct: 165 WSMTFIHSPYKRFFGEFYIIVHRFIIILGRLFEVQLMICVINTIAMVIVLTFLNFPYLIG 224 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I+ +IP G IS +++ I G+ + + A+ F+ L P + Sbjct: 225 FAILIFILGLIPVVGVLISLVPLTVTAFIIGDWHTVLVILVAVAVIHFMESYFLHPHFMS 284 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P L L+ + G+ GL IG ++ + ++ Sbjct: 285 QRTHMPILVILLNLIIMEKVFGVWGLIIGLPILTFLLDFFR 325 >gi|224476107|ref|YP_002633713.1| hypothetical protein Sca_0614 [Staphylococcus carnosus subsp. carnosus TM300] gi|222420714|emb|CAL27528.1| putative membrane protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 361 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 108/323 (33%), Gaps = 17/323 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + +K P + + + + P+ + K I V ++ + + + Sbjct: 34 IIIVKSVLLPFILSGFLFYVFLPL-QKLLEKYRVPRWGSITIIFVILIGIITAAVTVVAP 92 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M ++ L+ + Q + ++ + P + +K+ Sbjct: 93 LIMNQINNLIKQAPQLQQETQTMIKY------------ALDQMDKLPNDVTDRVNKVVKS 140 Query: 144 NGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G + + + + +I + L + +D + L + Sbjct: 141 FGDNVTNVLTNSISIVSQIISTLFLLIMVPFFLIYMLKDHEKFIPSIAKLFNGDRKVFVV 200 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPI 260 + + + ++S G ++ G++L Y + G+ + L + + MIP G + Sbjct: 201 NLLKDLNHTLQSYIQGQVTVSFILGVILYIGYSIIGLDYTLLLVLFAGVANMIPFLGPWM 260 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 SF +I +I+ + + + + + + P ++G + + L ++ Sbjct: 261 SFAPAAIIGIIQ-SPTAFIWVCVVTLVAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAG 319 Query: 321 RTMGLLGLFIGPVLMALIAVIWK 343 G + + + L A+I I + Sbjct: 320 NLGGFVLILVAVPLYAVIKTIVR 342 >gi|302875978|ref|YP_003844611.1| hypothetical protein Clocel_3161 [Clostridium cellulovorans 743B] gi|307686694|ref|ZP_07629140.1| hypothetical protein Ccel74_00981 [Clostridium cellulovorans 743B] gi|302578835|gb|ADL52847.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 307 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 1/160 (0%) Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-G 257 + +IA+ ++ A W+ G P + LG + +++ IP G Sbjct: 148 RLEYFGTNFINSFGKVIQAQFLIALVNSILSIIALWIMGFPQLIGLGFMIFVLSFIPVAG 207 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 IS +S+ G + + + A+ L P L+ LP F L+ Sbjct: 208 VIISLIPLSLIAFKIGGVTKLISVIIMIALLHSFESYVLNPKLISDKTSLPIFFIFAILI 267 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G MG+ GL +G L I I I+ + + + Sbjct: 268 LGKEFMGMWGLLLGIPLFIFILDILDVKIVEDSKKIKNVD 307 >gi|194364041|ref|YP_002026651.1| hypothetical protein Smal_0263 [Stenotrophomonas maltophilia R551-3] gi|194346845|gb|ACF49968.1| protein of unknown function UPF0118 [Stenotrophomonas maltophilia R551-3] Length = 369 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 105/333 (31%), Gaps = 15/333 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + +L+ + PVL A+ PI + + + + Sbjct: 34 VLAALAVGYTLWAAQDIILPVLLAMFFALVGNPILRLLQKLWIPRA--------LGALLI 85 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L + + + A Q V R + D+ + + ++ + Sbjct: 86 LGAGLGVTGSLAVQLIGPAMEWAQEAPQQLRKVARQVQDLTKPVQQANQAAENFARVAGG 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + +D R +R + + +++ LFF + Sbjct: 146 DSNRKVQVIRTQLDDPYRMLTRAPRLAASV---LAVVLLTLFFMIYGQSLQRAAIALFPN 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAIM 251 + I R + + + L +++I GLV L G+ + G + A++ Sbjct: 203 RQQQRFTSDILRSIEREVSRYVLTISVINTLVGLVFAGVLMLLGISLQEALLWGTVAALL 262 Query: 252 AMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 P P+ A+ + + + A + + + P ++G +KL Sbjct: 263 NFAPYVGPLIGVALMLLMGFVEFRDPLQALLPAAAYLGLHTLEGQMVTPIVLGRRMKLSP 322 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L+ G++GL + L+ I ++ Sbjct: 323 LVLILALMLFGWAWGMIGLLLAVPLLVCIKLVL 355 >gi|212697463|ref|ZP_03305591.1| hypothetical protein ANHYDRO_02033 [Anaerococcus hydrogenalis DSM 7454] gi|212675547|gb|EEB35154.1| hypothetical protein ANHYDRO_02033 [Anaerococcus hydrogenalis DSM 7454] Length = 386 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 113/321 (35%), Gaps = 5/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+I P ++ + ++ L + L++ + + ++ Sbjct: 36 MPIILALVIVGLLAPSIRKIDHILPIKHKAVSYLLGTILLLLLLFFLVWFVQFIVNQVSG 95 Query: 92 LVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTNGIDFI 149 LV ++ ++ V W++D + + + + L+ N I+ Sbjct: 96 LVGNIISNWDKIVSSVNTWINDANSQINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINIT 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F + +I ++A + D ++ + L I + Sbjct: 156 FGFTQAFINTSNEIIFFVITFVVAFYIILGDMQNVYDKYHLLIPEKSKNNLSLIRAVFKN 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 + +A +++ + G + + +I + ++P G I SI Sbjct: 216 STWNYIKSQLKLAFLCTIIMAIFLFFIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSII 275 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LLI N + L + + + + P ++G + + + L G++ G++G Sbjct: 276 ELLIFDNTIKSLGLLIVLTAWTGL-RQVIAPKVIGSSADIHPILSVIALYAGLKLFGVMG 334 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + PV+ I I++ I+ Sbjct: 335 AILLPVVFIFIVGIYRSGIID 355 >gi|209527315|ref|ZP_03275824.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] gi|209492241|gb|EDZ92587.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] Length = 382 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 6/303 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I + L+ +K + +A+++ + F K + ++ I+ Sbjct: 12 FLIAIYILWRIKQALLMIFAAVVLATALNRLTRQFQRLKLPR-SLAVFLSISLFFLGIII 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVP----RWLSDIPGGMWASELWTKHLSHPQS 132 L + + ++++L +V + G+ + +L G L Q Sbjct: 71 GFLLVVPPLINQLEQLAKQVPAGLEQGLKLLNLLIDYLRTDLNGPLREYLSEVSRDLRQI 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + I F G ++ +++ + D + + L Sbjct: 131 RIEQIIQQAQALSNQLIGGFGVVVGTTVEGLVSILLILVLTM-MLLADPQAYRRSSLQLI 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + I + +G + I L+ W+ VP A ++ ++ Sbjct: 190 PAFYRRRMNHILDTCEIALGRWLIGALLNMICVTLLTVIGLWILRVPLIFANAILAGLLN 249 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP P + + + + + AT + + I I + P L+ + L T Sbjct: 250 LIPNIGPAVSVIPPMAIALLDSPWKATLVVMLYIIIQQIETAVIMPSLMAYQVSLLPAIT 309 Query: 313 FFG 315 Sbjct: 310 LLA 312 >gi|192293063|ref|YP_001993668.1| hypothetical protein Rpal_4702 [Rhodopseudomonas palustris TIE-1] gi|192286812|gb|ACF03193.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 371 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 114/316 (36%), Gaps = 19/316 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K FF P+++A ++G P S + + +I T+ + + ++ L ++ Sbjct: 57 KPFFLPMVTAFVVGTMVSPAASFLERFRIPRAVSAVLIVTLGLGTVIF--MIGLISAPLI 114 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E + ++ + + V ++W + S + L + ++ ID Sbjct: 115 EWSSRIPEIGSLLRDKLHVLD---------RPLQMWRQIQSSLSGSESLPQPSVQMPKID 165 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ F S L L + M++ ++D + + +I + Sbjct: 166 WVFEFLSP----TLTEVLLFLVMLVLFVAGWKDLRR--SLVMNFAGREARLRTLRILNEI 219 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + L +T+I + G G AG+P+ LG + A++ IP P + Sbjct: 220 EGSLGAYLLTVTVINLCYGAATGLLCAAAGMPNPAGLGALAAVLNFIPIIGPFVMFVIMT 279 Query: 268 YLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I L L + F + P ++G + L L F L G Sbjct: 280 VVGIISMPTLGAGLLAPLGFVLLTFFEGHFITPTIIGRRLSLNTLAVFITLAFWTWLWGP 339 Query: 326 LGLFIGPVLMALIAVI 341 +G F+ L+ + V+ Sbjct: 340 MGSFLASPLLIVGLVL 355 >gi|261339650|ref|ZP_05967508.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] gi|288318476|gb|EFC57414.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] Length = 344 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 116/328 (35%), Gaps = 22/328 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 T+ + ++ ++ IIL + F P + AL I P+ + + Sbjct: 7 TLNGLKIVIMLGMLVIILTGVRFAADIIVPFILALFIAVILNPLVHRMVRLRIPR----- 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+A ++ + IV ++ L Y + EL +P++ S + + E W Sbjct: 62 VLAITLLIGIIIVAMVLLVAYLGTSLNELAR----------TLPKYRSSLAIPLMQLEPW 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++I E L+ + + + SI + + + F + Sbjct: 112 LQR----AGIEISVEELLRYIDPNAAMTIVTSLLAQLSNAMTSIFLLFLTVVFMLLEVPQ 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + P + + + T I++ G V+ V Sbjct: 168 LPAKLQQMMVR--PVEGMGAIQRALDSVSRYLVLKTAISLVTGAVVWGMLMALDVRFAFV 225 Query: 244 LGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + IP G+ ++ + +L+ +++A L I I L P ++G Sbjct: 226 WGLLAFALNYIPNIGSVLAAIPPILQVLVFSGLYDALVLLAGYLIVNLIFGNILEPRMMG 285 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L F L+ +G +G+ + Sbjct: 286 RGLGLSTLVVFLSLIFWGWLLGPVGMLL 313 >gi|30023467|ref|NP_835098.1| hypothetical protein BC5437 [Bacillus cereus ATCC 14579] gi|206970229|ref|ZP_03231182.1| putative membrane protein [Bacillus cereus AH1134] gi|228961701|ref|ZP_04123308.1| hypothetical protein bthur0005_51420 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229072903|ref|ZP_04206101.1| hypothetical protein bcere0025_50630 [Bacillus cereus F65185] gi|229082649|ref|ZP_04215112.1| hypothetical protein bcere0023_52660 [Bacillus cereus Rock4-2] gi|229130684|ref|ZP_04259639.1| hypothetical protein bcere0015_51170 [Bacillus cereus BDRD-Cer4] gi|229181686|ref|ZP_04309011.1| hypothetical protein bcere0005_50250 [Bacillus cereus 172560W] gi|229193690|ref|ZP_04320633.1| hypothetical protein bcere0002_53330 [Bacillus cereus ATCC 10876] gi|296505860|ref|YP_003667560.1| hypothetical protein BMB171_C5032 [Bacillus thuringiensis BMB171] gi|29899028|gb|AAP12299.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206734806|gb|EDZ51975.1| putative membrane protein [Bacillus cereus AH1134] gi|228589843|gb|EEK47719.1| hypothetical protein bcere0002_53330 [Bacillus cereus ATCC 10876] gi|228601882|gb|EEK59378.1| hypothetical protein bcere0005_50250 [Bacillus cereus 172560W] gi|228652767|gb|EEL08650.1| hypothetical protein bcere0015_51170 [Bacillus cereus BDRD-Cer4] gi|228701081|gb|EEL53604.1| hypothetical protein bcere0023_52660 [Bacillus cereus Rock4-2] gi|228710246|gb|EEL62222.1| hypothetical protein bcere0025_50630 [Bacillus cereus F65185] gi|228797977|gb|EEM44983.1| hypothetical protein bthur0005_51420 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326912|gb|ADH09840.1| hypothetical protein BMB171_C5032 [Bacillus thuringiensis BMB171] Length = 347 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP G Sbjct: 188 EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVI 247 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G I + + + + L P + LP TF L+ Sbjct: 248 ISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFS 307 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 308 EHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|300855679|ref|YP_003780663.1| putative permease [Clostridium ljungdahlii DSM 13528] gi|300435794|gb|ADK15561.1| predicted permease [Clostridium ljungdahlii DSM 13528] Length = 342 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 67/202 (33%), Gaps = 4/202 (1%) Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK---ISRIV 207 + + + ++I I+ FF +I + L + + + Sbjct: 141 NISLQLATNVGKWSVNIFISIMLSLFFILGKHNIIEFLKKFKDSKVSGLYNYLCFFGKNF 200 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVS 266 IIA ++ + P V LG + I+++IP G IS +S Sbjct: 201 LNSFGKVMQAQIIIAFFNTIISVIMLSIMNFPQLVTLGFMIFILSLIPVAGVIISLIPLS 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + G + + AI I L P L+ +KLP TF L+ MG Sbjct: 261 MVAFSIGGFTKVIYVLIMVAIIHVIESYVLNPKLMSSKVKLPIFFTFIILIVSEHIMGAW 320 Query: 327 GLFIGPVLMALIAVIWKESIMA 348 G IG L I + I Sbjct: 321 GFLIGIPLFMFILDLLDVKIHD 342 >gi|262377552|ref|ZP_06070773.1| GAF sensor protein [Acinetobacter lwoffii SH145] gi|262307439|gb|EEY88581.1| GAF sensor protein [Acinetobacter lwoffii SH145] Length = 655 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 3/191 (1%) Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A ++G ++ + + + + +L L + + I Sbjct: 26 AMQWGARIFHPLATVGIVFLFVVLILLSRKDLHDRLLKLLGGNLNVGTDALDDAADR-IG 84 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + ++ + G+ + WL GVP+ + G++ M +P P+ I L Sbjct: 85 TYLRMQLLVNVTFGIPMAVGLWLIGVPAAIMWGIVAIGMRFLPYVGPMISALFPITLAFA 144 Query: 273 GNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + I + + P+L G L L G GL + Sbjct: 145 VDPGWNMVLWTIGLILLLELISNNVIEPWLYGESTGLSTLAIILAATFWTTLWGAAGLIL 204 Query: 331 GPVLMALIAVI 341 L A + V+ Sbjct: 205 STPLTACLLVL 215 >gi|127513326|ref|YP_001094523.1| hypothetical protein Shew_2398 [Shewanella loihica PV-4] gi|126638621|gb|ABO24264.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 389 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 106/335 (31%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P + K + LAV + Sbjct: 12 KGFAIMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPAINGMTRLKLPRA--LAVAIMM 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L L + E + W Sbjct: 70 VFIVLMGLWLASLVGSSINEFSRQLPLYRDQLVEQFS-----------------WVLTKL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++++ E L + ++ +I+ + F + + ++L Sbjct: 113 QALNIEVSKEQILAYFDPGIALSMTTNMLSSVGGVMANLFLIILTVVFMLFEAQDLPKKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P K + + + T++++G G+V+G+ L GV + V+ Sbjct: 173 HFALDD--PDMRIKQIDKFLQSVNQYMVIKTLVSVGTGVVVGTGLALMGVDYALLWAVVA 230 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP G+ I+ + I+ A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPPVLLAFIQLGPAGAGGTALLYLATNTVMGNIVEPKYMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 L F L+ +G +G+ + P+ M + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIAL 325 >gi|125596938|gb|EAZ36718.1| hypothetical protein OsJ_21054 [Oryza sativa Japonica Group] Length = 456 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 9/203 (4%) Query: 160 FLDYCLSIIFMIIALFFFY-RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L++ ++ + L++ +G ++Q+ L L + ++ I S L Sbjct: 259 VLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLP-LSKQVKDRCVEVIDHAISSVLLAT 317 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFN 277 IAI +G + + L V V I A++P P +S + LL++G Sbjct: 318 AKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAGQLLMEGRYVL 377 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLGLFIGPVLM 335 A + + I + ++ + G T ++GG+ L G +GP++M Sbjct: 378 AIVVTVVHLIIMDYGTTVIQEDIPGYNG----YLTGLSIIGGMALFPNALEGAILGPLIM 433 Query: 336 ALIAVIWKESIMAIKENKEKISS 358 ++ + + + E+ SS Sbjct: 434 TVVMALKNLYTEFVLADSEETSS 456 >gi|239624740|ref|ZP_04667771.1| sporulation integral membrane protein [Clostridiales bacterium 1_7_47_FAA] gi|239521126|gb|EEQ60992.1| sporulation integral membrane protein [Clostridiales bacterium 1_7_47FAA] Length = 357 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 17/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM--CLFIVP 77 + +L AP L+ I P + + V+ F+V Sbjct: 21 VYAGFRYLLPLVAPFLAGYIFALLLRPSARFLAYRMRIHVKGKTFHMPIGVIGGAEFLVL 80 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + +L ++ + H +P W+ +W + + + Sbjct: 81 ISILGTGLYMGAVKLCAEGKMLMMH---LPAWIDR--FDIWLTGSCHRVETAFGLRYDCV 135 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF-----MIIALFFFYRDGFSISQQLDSLG 192 + + + L+II II+L F S+ + D Sbjct: 136 ADLAGEMLYQLVDTGKTAAMPFLMTNSLTIIACLAKWAIISLVVFLAAILSLQEMEDLRT 195 Query: 193 EHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + K+ + I +++ ++ F II + + ++ G P ++ G+ Sbjct: 196 RRDQSTFRKEFNLIGGRLVQTGKAWFKSQGIILFITTGLCIAGMFIIGNPYYIMAGIGIG 255 Query: 250 IMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +P G ++ L+ G+ A L + F V + L ++GG + L Sbjct: 256 ILDALPIFGTGTVLIPWALLELLTGDWKQAVILTGLYLVCYF-VRQILEVRMMGGQVGLS 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L T + G+ G G +GP+ + L+ + + Sbjct: 315 PLETLASVYVGLELFGFFGFILGPLGLLLVEDLVEVWNRETD 356 >gi|229160935|ref|ZP_04288924.1| hypothetical protein bcere0009_17240 [Bacillus cereus R309803] gi|228622503|gb|EEK79340.1| hypothetical protein bcere0009_17240 [Bacillus cereus R309803] Length = 337 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 114/324 (35%), Gaps = 25/324 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 9 RSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLNVNRKIVIACL 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L +++ +L+ + L Q+ P + Sbjct: 69 YIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQN-----------PPDNEIIKYALST 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + K + + G+D I + + G + L LS+I + L + I Sbjct: 118 INGMEVSKYIEQ------GVDVIYQSIANIGKVSLQILLSLILSLFFL----LEKERIIT 167 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRS---TFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++++I+ + RS +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSRLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLLV 227 Query: 244 LGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ ++ +IP G IS + I G + + ++ + + L P + Sbjct: 228 LAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLL 326 LP TF L+ +G+ Sbjct: 288 AKTNLPIFFTFMILIFSEHFLGIW 311 >gi|315037276|ref|YP_004030844.1| permease [Lactobacillus amylovorus GRL 1112] gi|325955754|ref|YP_004286364.1| permease [Lactobacillus acidophilus 30SC] gi|312275409|gb|ADQ58049.1| putative permease [Lactobacillus amylovorus GRL 1112] gi|325332319|gb|ADZ06227.1| permease [Lactobacillus acidophilus 30SC] Length = 345 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 111/336 (33%), Gaps = 27/336 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT-VSVM 71 R ++ +I+ LY ++ +L I + + + T + V+ T + ++ Sbjct: 16 RVVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIRLVQRYIPKMPTGIIVVVTYLIIL 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + M+++ ++V V+ + + T+++S + Sbjct: 76 ALLYFVITVYLPMLMVQISKMVKSVMAFYESD-----------ESLRLMSYVTRYISKGE 124 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ---- 187 ++ FA ++ +I FF+ + + + Sbjct: 125 LIEQAKHAM----------TFAFHTATNIGTLTIATFMSLILSFFYTIELKKMREFSSLF 174 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S + ++IAI + + +P VALG++ Sbjct: 175 VKSGYFKWLFEDICYFGKKFTNTFGVVLEAQSLIAICNTALTMIGLAIMRMPQIVALGLM 234 Query: 248 TAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I++++P G IS +SI G I +F+ I + L P + + Sbjct: 235 VFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKFMASKTE 294 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G GL +G + + Sbjct: 295 LPIFYTFLVLLVAEHFWGSWGLIVGVPIFTFFLDVL 330 >gi|167758907|ref|ZP_02431034.1| hypothetical protein CLOSCI_01253 [Clostridium scindens ATCC 35704] gi|167663314|gb|EDS07444.1| hypothetical protein CLOSCI_01253 [Clostridium scindens ATCC 35704] Length = 497 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 1/207 (0%) Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 + + II + LF + + ++ ++ ++ Sbjct: 257 NILNEIFNALIGIIISVYILFSKETFIRQTKKCVYAILSPRHANMVLHLTTKSNEIFGGF 316 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 +G I + G++ + +P V + VI + +IP P S L++ + Sbjct: 317 IIGKIIDSAIIGVLCFFGLTILNMPYAVLVSVIVGVTNVIPFFGPYIGAIPSAILIMLAD 376 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 ++ + L P ++G L ++ G G +G+ +G Sbjct: 377 PIKGLYFIIFILLLQQFDGNILGPKILGNSTGLSAFWVIVAILLGGGLFGFVGMIMGVPT 436 Query: 335 MALIAVIWKESIMAIKENKE-KISSNF 360 A++ I + + E K+ +SNF Sbjct: 437 FAVLYYIVQMIMNYRLERKKLPANSNF 463 >gi|228955687|ref|ZP_04117685.1| hypothetical protein bthur0006_50370 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804056|gb|EEM50677.1| hypothetical protein bthur0006_50370 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 347 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP G Sbjct: 188 EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVI 247 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G I + + + + L P + LP TF L+ Sbjct: 248 ISLFPLCMIAYNIGGIMYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFS 307 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 308 EHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|39997549|ref|NP_953500.1| hypothetical protein GSU2454 [Geobacter sulfurreducens PCA] gi|39984440|gb|AAR35827.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298506491|gb|ADI85214.1| membrane protein UPF0118 [Geobacter sulfurreducens KN400] Length = 346 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 34/325 (10%), Positives = 100/325 (30%), Gaps = 11/325 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ ++ + Y ++ + L + + + P+ + + + Sbjct: 9 NRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERR-GVRRPWGILFLY 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + L + L + ++ + Q G + +A E W Sbjct: 68 ALLAVFSVFFFIVLVPFLSLRWEAFITGLPAYLQKGKQIVFAWKSRAVPPYAVEEWRWLF 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + +++ I +FF + Sbjct: 128 DTAAGQADKL--------LAKLGAGVYAAAEGLVFNLFNLVLAPILVFFMLWYKKEFMET 179 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + R V + I G ++++ ++ A ++ G+ + G+ Sbjct: 180 AAAWLPASRREVLLALGREVNESIGGYIRGQFMVSVIVAVLSTVALFVIGIDYPIVNGIF 239 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL--FIVDKTLRPFLVGGPI 305 + +++P I T ++ L + GA + F+ ++P + + Sbjct: 240 AGLASVLPFIGVILATLPPLFFAYVQYESGMVLLQVIGAFSVIYFLEGYLVKPLVFKESM 299 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFI 330 L L T ++ MG G+ + Sbjct: 300 DLNPLVTIIVVMVFGELMGFWGILL 324 >gi|329848057|ref|ZP_08263085.1| hypothetical protein ABI_11260 [Asticcacaulis biprosthecum C19] gi|328843120|gb|EGF92689.1| hypothetical protein ABI_11260 [Asticcacaulis biprosthecum C19] Length = 359 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 104/333 (31%), Gaps = 19/333 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ + Y L + + A++I I + + ++ Sbjct: 12 QRVGFVVLAVAATLLAYNLMNLWILIFGAIVIAVVLRGIAEPLMKVCKLNA--------- 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 PL L ++ + + V +P + + Sbjct: 63 --------PLAVLAAVLLVVGVVATTFYLFGRDIVAQVQILSKQLPVAWAELQTRLEAAG 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + G + + L + + +IA + Sbjct: 115 LSDEVQAQIDAAGQQAGG--VASKIPQLAGGLLSGVANFLVALIAGILLAIHPGQYRDGI 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A K + K ++ FLG + I G++ G W+ GVPS +ALG+++ Sbjct: 173 VFLFPDSYKARVKDSLNVAGKALQLWFLGQFVSMIVVGVMTGVGLWVMGVPSALALGMMS 232 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P P+ + L + + + + P + +P Sbjct: 233 GLAQFVPIVGPVISAGPGLLLAGAAGLDKFLYALVLYVGVSQLEANLITPAVQNRISSVP 292 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + T F +VG +G +G+ L ++ + Sbjct: 293 MVLTLFAVVGFAGLLGPVGVLYAMPLTVVLYTL 325 >gi|296156032|ref|ZP_06838871.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295893538|gb|EFG73317.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 678 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 112/358 (31%), Gaps = 35/358 (9%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + ++ LYF P+ A+++ F P+ + + V + + Sbjct: 27 GLIALAVGVTVVACLYFASAVLIPMTLAILLSFLVAPLADALTRLRLGH-----VASVFA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW------ASELW 123 + + + + L ++ +L + + ++ G A + Sbjct: 82 AVVISVSVIGMLGAVIATQLTDLAAGMPRYQATIERKMETAHNLTIGKLNRFADAAGQAL 141 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFAS-------------RFGMIFLDYCLSIIFM 170 + P ++ + A+ L +S + Sbjct: 142 QRATIEPPQPAPQRDSASPGSTRSTANAPAAVPVEVREPVPTPFELARRVLSPAISPLET 201 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFP----AYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +F L LF + + + F+ + G G Sbjct: 202 AFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQLGLNAGVG 261 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG- 285 +V+G+ +L GVPS + G++ A++ ++P + + ++ + + + +W Sbjct: 262 VVIGTGLFLIGVPSPILWGILAALLRLVPYVG--IWISATLATALAAAVSPGWSMAIWSL 319 Query: 286 ---AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIA 339 +V + + P L G L + G +GL + P+ + L+ Sbjct: 320 ALFVTVELLVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLV 377 >gi|154148283|ref|YP_001406674.1| transport protein [Campylobacter hominis ATCC BAA-381] gi|153804292|gb|ABS51299.1| transport protein [Campylobacter hominis ATCC BAA-381] Length = 339 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 118/339 (34%), Gaps = 21/339 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ + II L P L A I + PI K + Sbjct: 1 MKLQTFLITLASIVIIFAGLKAANSVVVPFLLATFIAIVTSPILDILEKVKIPR-----I 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + V + L F+ + M + + ++ N+ + +E Sbjct: 56 ISFILVTFCMLGFLAFIGSVAVGTMFDFLGQLPEFNRK------------FQIILNEWME 103 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I+ + + + I S +F+++ + F + + Sbjct: 104 NLNNTEFRDMIVFDPNMFNLESNKIITTTSSLVRKTGSIMSMWLFILLLVAFMLFETRIM 163 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L + ++ TI++ G+++GS + +P V Sbjct: 164 QEKVKYLSVKY--SNAIVFVHSFVYNLKRYLFIKTIVSTATGIIIGSGLYYLNIPYAVLW 221 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++ IM IP G+ ++ L+ GNI +A + + I+ L P LVG Sbjct: 222 GIVAFIMNYIPTIGSFVAAVPAVFIALLSGNISDAIWVIILYTATNTILGVILEPRLVGE 281 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 + + + F L+ +G+ GLF+ P+ M + + Sbjct: 282 ELGISTITVLFSLLLWGYVLGIGGLFLAVPLTMTIQIAL 320 >gi|284049859|ref|ZP_06380069.1| hypothetical protein AplaP_00130 [Arthrospira platensis str. Paraca] gi|291565655|dbj|BAI87927.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 387 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 109/337 (32%), Gaps = 8/337 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + I L L+ + + +++I+ + + S +A V Sbjct: 7 IAFLFLAISLTILWEFRHILLLLFTSVILAIALNGLVRWL-QRFRLSRGKAVFLAISLVS 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L I+ + + + ++L++ V + RW+ + +W ++ Sbjct: 66 FLGIMFFSLIMPPFLDQFQQLLNLVPRGYER---FSRWID---LTLQQPPIWLPEINLRL 119 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + F + F ++ + L + S + + L Sbjct: 120 PGFTEIARQVGPLAQNILGNFFAVFNFSVNTLLQGLLIFVFTL-MLVANPASYRRLVVRL 178 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + G+ I ++ + + + V +A ++ + Sbjct: 179 FPSFYRRRADEILGLCEISLLQWMRGIAINSVFIATLSYISLTILNVEFVLAHALLAGVF 238 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P P + + + + A + + I + P ++ I L Sbjct: 239 NLVPNIGPTLSVVFPVSVALLDSPGKAFLVLVAYIIIQNLESYWFSPMIMQRQISLLPAA 298 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + R +G GL + L + +++++ Sbjct: 299 TLMAQLFFARFLGFGGLVLALPLAVVTKTWLEQAVLK 335 >gi|154248206|ref|YP_001419164.1| hypothetical protein Xaut_4286 [Xanthobacter autotrophicus Py2] gi|154162291|gb|ABS69507.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 343 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 109/350 (31%), Gaps = 22/350 (6%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R + ++ V+ YF + V +A+++ + F + Sbjct: 10 RVAMAILVAVAFYFAFRVVDVILQVFAAVLVSLALHALAEPFARLTRFPERYA------- 62 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + P+ L + G+ ++ + + + V +++P A E Sbjct: 63 -----VFPVALLVFGGIG-----LTLYLFGSTIQVQVTELFNELPAAWSAFEKRFHLEGM 112 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L +E + + + L +++ +F + Sbjct: 113 SDDLLRRAEAAAPS--GETVISAVQGLTSNLFQVVLGSFLVVVGGIYFAASPDLYRRMFL 170 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL A + + + +R I + G++ + GVPS +AL + Sbjct: 171 SLWAEPERAAVARRLAAISEDLRHFLKAQLIAMVVVGVLTFIGLTIVGVPSALALALFAG 230 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P P+ A ++ + + + + L I + P L + LP Sbjct: 231 LAEFVPMIGPVVAAAPAVLIALTLGMDSGLWTLLVFVIVQQSESNVITPLLQQRMVSLPP 290 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T F +V G LG+ + L L +K + + K + Sbjct: 291 AVTLFAVVAFGNVFGALGVLLATPLTVLAFAAFKAHGEPEAKPEAKPEQD 340 >gi|20091469|ref|NP_617544.1| transmembrane protein [Methanosarcina acetivorans C2A] gi|19916615|gb|AAM06024.1| transmembrane protein [Methanosarcina acetivorans C2A] Length = 335 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 17/326 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +L + + P+L A++IG P+ ++ + I TV M Sbjct: 11 LAASTVLSVIATVSSITVPLLVAVVIGIVFRPLVDILEQRRVPRN-----IGTVLTMLFI 65 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + LF + + +++VL + G + + + ++ + L+ + Sbjct: 66 FLGVAALFVILIKGFIDQGAEIVLQLEAGW------ASLQAWLLQFQVKEETLNSISAAV 119 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 S L I S + + I F + LFF RDG I L + Sbjct: 120 SNSLPALGQGIIGLF----SSTFSSAIALLIGIYFSVFILFFILRDGPEIEVWLARQF-N 174 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L P I + + IR F G I A +V+ + VP ++ ++ + I Sbjct: 175 LKPGTGAAIVADISRSIRLYFRGTAITAAITAIVVVIPLIILKVPLIGSILILYFFTSFI 234 Query: 255 P-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P GA I I G A + + I + + + +G +K+ L F Sbjct: 235 PYIGAFIGGAFAVIIAFGSGGPETALIIAVAVTISNGALQNAINTWALGTTLKIHPLVVF 294 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 + G L + + L A++ Sbjct: 295 LVTIASGVVGGFLAMILAVPLTAVVV 320 >gi|301300495|ref|ZP_07206693.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851895|gb|EFK79581.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 280 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 8/214 (3%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK- 202 G+ I ++ + G ++ I ++ FFF D + + S + + ++ Sbjct: 62 GGMSIIVKYLANIGT----MGMTFIMALLLSFFFTIDKDDLFKFSKSFLKGPYSWFFNDV 117 Query: 203 --ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 ++I IIA+ + + +P +L ++ M+MIP G Sbjct: 118 YYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMPQLFSLALLIFFMSMIPVAGVI 177 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G + + + + + L P L+ +LP TF L Sbjct: 178 ISAIPMMLIGYTVGGVRYIIYIIIMLCVVHALEAYVLNPKLMSSRTELPIFYTFVVLYVS 237 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ GL +G + + I I+ + Sbjct: 238 EHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 271 >gi|325577684|ref|ZP_08147959.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] gi|325160429|gb|EGC72555.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] Length = 346 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 131/346 (37%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + ++ + I+ + P L AL I P+ + +K Sbjct: 1 MEKNLNFNRTVVAMAALVIVFAGIKLAAEIVVPFLLALFIAIICSPVIKAMTQRKVPHGI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A++ + ++ F L L + E + Q+ + + ++D+ Sbjct: 61 AIALLFILILIVFFF--LAGLINSSVQEFTRSIP------QYKVLLSERVNDVMALAQKL 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + I E ++ I F SR + F ++ +I+A+ F + Sbjct: 113 KL---------PIVISREAIMEHFDPSVIMNFVSRLLLNFSGVVTNVFVLILAVIFMLLE 163 Query: 181 GFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++ +L + EH A I RI+ VI S T+I++ G +AG Sbjct: 164 APTMKHKLALVLSDNEHDVVAEEHHIDRILDGVI-SYLGVKTVISLLTGFTTWILLDVAG 222 Query: 238 VPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + ++ ++ IP G+ I+ + + L+ + + + ++ + Sbjct: 223 VQYAILWATLSFLLNYIPNIGSIIAAVPIIVQALLLNGFGVGMGVTVGIIVLNIVIGNII 282 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVI 341 P ++G + L L FF L+ +G +G+ + P+ MA + Sbjct: 283 EPKMMGKTLGLSTLVVFFSLLFWGWLLGTVGMLLSVPLTMAFKITL 328 >gi|331090805|ref|ZP_08339652.1| hypothetical protein HMPREF9477_00295 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399913|gb|EGG79572.1| hypothetical protein HMPREF9477_00295 [Lachnospiraceae bacterium 2_1_46FAA] Length = 420 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 52/392 (13%), Positives = 117/392 (29%), Gaps = 34/392 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVS-----LYFLK------------GFFAPVLSALIIGFTS 44 R M Q MR + F+++++ FL+ G P++ L+ + Sbjct: 13 RTQMKIKQYFMRGLTSFLVILAGIVCYFAFLRLDDIAGLLGKIGGILQPIILGLVFAYLL 72 Query: 45 WPIY--------SSFISKKEES-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P+ F K + + + + + I+ L + + Sbjct: 73 NPLVTIIENQVIKMFEKKAKNREKLRKVSRSIGIAGSLLVAFAVVILLLNMVIPELYRSI 132 Query: 90 KELVSKVVLANQHGIPVPRW--LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++L+ + + I + D + Q + Sbjct: 133 RDLIMGLPHQINNAIDFLESEKIHDTAFSGTIKSVLENGAEAFQMWLKTDLLTRINQMMS 192 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F+ D + +I + L + + +L +I+R Sbjct: 193 FVTVGVFSVVETLFDIAVGVIVSVYVLNSKEKFTGQCKKITYALLSRERANLMLQITRKS 252 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 K+ +G I +I G++ + +P + + VI + ++P P S Sbjct: 253 HKIFGGFVIGKIIDSIIIGILCFIGLSILDIPYTLLVSVIVGVTNVVPFFGPYIGAIPSA 312 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L++ ++ + L P ++G L F ++ G G +G Sbjct: 313 ILILLSEPIKGIYFVIFILVLQQFDGNILGPKILGDSTGLSAFWVVFSILLGGGLFGFVG 372 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +G A+ + I E K+ + Sbjct: 373 MIMGVPTFAVFYYLVSMFIEQKLERKKLPKES 404 >gi|315928095|gb|EFV07414.1| outer membrane domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 153 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 11/149 (7%) Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIYLLIK 272 M I+AI +G + G G + +GVI A+ ++IP G + + VS+Y Sbjct: 4 VLYSMVIVAIFQGALFGLITIFYGYDG-ILMGVIFAVSSLIPAIGGALIYMPVSLYEFAS 62 Query: 273 GNIFNATCLFLWGAIEL-FIVDKTLRPF--------LVGGPIKLPFLPTFFGLVGGVRTM 323 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T Sbjct: 63 NNLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTF 122 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G G+ +GP ++ + ++ +N Sbjct: 123 GFWGIILGPAILTFFVSTLRMYVILKDKN 151 >gi|300854561|ref|YP_003779545.1| hypothetical protein CLJU_c13750 [Clostridium ljungdahlii DSM 13528] gi|300434676|gb|ADK14443.1| predicted membrane protein [Clostridium ljungdahlii DSM 13528] Length = 388 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 15/298 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAV-----IATVSVMCLFIVPLLFLFYYGML 87 P + ALII + P + E+ I + V L + + Sbjct: 51 PFVMALIIVYLLKPGVENIEKFLEKKKILKKASHRRVIGIIGVYTLVAAIFAAVVSGIYI 110 Query: 88 EMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + +S + +L++ + + +L + ++S P SL + Sbjct: 111 MIGGKLSHNTSIANMASYLNEYLNNPTLSVSSVSEKLKSLNISIPTSLNDKIAQIVSYVQ 170 Query: 146 IDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW--- 200 F + I + II + +D + + F Sbjct: 171 SYFSASIGAMTNSIVAIVSNIALFFIAIILSIYLIQDSEYFVGLWNKIFNLAFGKSKTGS 230 Query: 201 --KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K++ ++ G + A G++ + G+ + +G+I I MIP Sbjct: 231 KLKEVLHVMDVTFYKYIRGQLLEASIVGVLSAIVLYFIGIDYALVIGIIAGICNMIPYIG 290 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFG 315 + T +++ + + G + G + + V D L P +VG + L + T Sbjct: 291 AVVGTVLAVIMALLGGQPITAVWAIIGMLAVRQVDDSLLAPKIVGNSVGLHPVFTMIA 348 >gi|229176114|ref|ZP_04303607.1| hypothetical protein bcere0006_51820 [Bacillus cereus MM3] gi|228607349|gb|EEK64678.1| hypothetical protein bcere0006_51820 [Bacillus cereus MM3] Length = 271 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 59/155 (38%), Gaps = 1/155 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP G Sbjct: 115 EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVI 174 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + + G I + + + + L P + LP TF L+ Sbjct: 175 ISLFPLCMIAYNIGGITYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFS 234 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+ GL IG + + + + ++++ E Sbjct: 235 EHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVE 269 >gi|226355646|ref|YP_002785386.1| hypothetical protein Deide_07700 [Deinococcus deserti VCD115] gi|226317636|gb|ACO45632.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 362 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 33/289 (11%), Positives = 98/289 (33%), Gaps = 2/289 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L V A + F P+ + + + ++ + ++ + V ++ + Sbjct: 23 LLASVLFTVFMAYGLAFLCNPLLTWLERHRVRRMIGVLLLLVLGILLVTAV-VMTVSSQI 81 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + + + L +PG E T ++ + L Sbjct: 82 NGMLNNVPELARSLKEILVNLLDRLDRLPGTEGLKETLTTYIDREVQDITQNAGPLAERL 141 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + P + + + F++ +F D I + + + + ++S Sbjct: 142 LSTGPTVMKTL-SNLVGWLGQVGFIVTLAMYFMIDYDGIGRSMLQILPRAWQPTALQLSE 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + S G ++ I ++ + L VP+ +A+G+++ ++ + P + + + Sbjct: 201 DVSESFGSYLRGSLLLLIACVVLATTGLLLLKVPNPLAIGLLSGVINLFPYVGIVLASIL 260 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 +++ I + + ++ L P ++G ++L Sbjct: 261 AMFQAIPMGTTTILLVAGLYFLINQLLGNVLGPLIMGHTMRLSAAAILI 309 >gi|257066664|ref|YP_003152920.1| hypothetical protein Apre_1173 [Anaerococcus prevotii DSM 20548] gi|256798544|gb|ACV29199.1| protein of unknown function UPF0118 [Anaerococcus prevotii DSM 20548] Length = 386 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 112/321 (34%), Gaps = 5/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+I P ++ + ++ L + L++ + + ++ Sbjct: 36 MPIILALVIVGLLAPSIRKIDHILPIKHKAVSYLLGTILLLLLLFFLIWFVQFIVNQVSG 95 Query: 92 LVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTNGIDFI 149 LV ++ ++ V W++D + + + + L+ N I+ Sbjct: 96 LVGNIISNWDKIVSSVNTWINDANSQINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINIT 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F + +I ++A + D ++ + L I + Sbjct: 156 FGFTQAFINTSNEIIFFVITFVVAFYIILGDMQNVYDKYHLLIPEKSKNNLSLIRTVFKN 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAVSIY 268 + +A +++ + G + + +I + ++P G I SI Sbjct: 216 STWNYIKSQLKLAFLCTIIMAIFLFFIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSII 275 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LLI N + L + + + + P ++G + + L G++ G++G Sbjct: 276 ELLIFDNTIKSLGLLIVLTAWTGL-RQVIAPKVIGSSADIHPILLVIALYAGLKLFGVMG 334 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + PV+ I I++ I+ Sbjct: 335 AILLPVVFIFIVGIYRSGIID 355 >gi|261493722|ref|ZP_05990240.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494544|ref|ZP_05991028.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309793|gb|EEY11012.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310612|gb|EEY11797.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 342 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 108/313 (34%), Gaps = 18/313 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L +L I P+ +K +LA+ + V L L + + E Sbjct: 20 VVPFLLSLFIAIICSPMIKFMTKRKV--PLWLAITILLIVFILGFSFLAGIINNTLQEFT 77 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + I V L+ H+ S + + F ++ ++ + Sbjct: 78 NAIPQYKIQLSSRIQVILELAH-----------RWHIPLTLSQEEIMSKFDPSSIMNLVS 126 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + + +I L + ++ +L + K+ V + Sbjct: 127 KLLMGLSGALSNIFVIFLVVIFMLLEMPVAKYKLA---LALSPDDDLSNEKEYINQVLEG 183 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYL 269 + T +++ G ++ + GV + ++T ++ +P G+ ++ + I Sbjct: 184 VIGYLGVKTFVSLLTGGLVWILLEILGVEYAILWAILTFLLNYVPNIGSILAGIPIVIQA 243 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ + + +V L P L+G + L L F L+ +G +G+ Sbjct: 244 LVLNGFSIGLGTLIGIVVINMVVGNALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGML 303 Query: 330 IG-PVLMALIAVI 341 + P+ MA + Sbjct: 304 LSVPLTMACKVAL 316 >gi|126735527|ref|ZP_01751272.1| hypothetical protein RCCS2_16666 [Roseobacter sp. CCS2] gi|126714714|gb|EBA11580.1| hypothetical protein RCCS2_16666 [Roseobacter sp. CCS2] Length = 380 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 104/278 (37%), Gaps = 14/278 (5%) Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG---------GMWASELWTKHLSHPQ 131 + + + VVL Q P +++ D+P L + + Sbjct: 80 VISAALFTTILTLLIVVLLVQLSSPAAQFIEDLPSLMAEIQEKLASAGGALEAINEASEA 139 Query: 132 SLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS-ISQQL 188 + +++S+ +T ++ + + + + I+F ++ LFF G +++ + Sbjct: 140 AEEMMSDKAAETVAVEVVSDTGIVATIFSMAPGFLSRIMFALVLLFFLVASGDMFLTKTV 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + ++ + + G+ II G G+ + A L G+PS + LG + Sbjct: 200 QSLNKFSDKKKAVEVLHTIEDRLGYYLGGIAIINAGLGVAVAVAMTLWGLPSAIILGFMA 259 Query: 249 AIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +P + A ++ + + A +F + I + + P + ++ Sbjct: 260 FGLNFVPFVGGLIGAMIAAAVAFVSLDGTWTAMGVFATYIMLTSIEGQFITPLAISRRMR 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F + ++G+ + ++ ++ ++ E Sbjct: 320 LNTTVVFLSVAFFAWIWSVMGMVVALPVLIVVKIVCDE 357 >gi|227878057|ref|ZP_03996046.1| permease [Lactobacillus crispatus JV-V01] gi|227862344|gb|EEJ69874.1| permease [Lactobacillus crispatus JV-V01] Length = 349 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 114/343 (33%), Gaps = 27/343 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + R++++ +I+ LY ++ VL I + + + T L V Sbjct: 14 KNNIPLRRFVVLLLIIACLYEIRAMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGLIVA 73 Query: 66 ATVSVMCLFIVPLLFL-FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 T ++ + ++ + + ++ ++V V+ + + T Sbjct: 74 VTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYESN-----------ESSRLASHVT 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +++S + + + FA F ++ +I FF+ + + Sbjct: 123 RYISKGEIVTQ----------AKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRM 172 Query: 185 SQQ----LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S + + IAI + +P Sbjct: 173 IEFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAFMHMPQ 232 Query: 241 HVALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +ALG++ I++++P G IS +SI G I +F+ I I L P Sbjct: 233 IIALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPK 292 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + + Sbjct: 293 FMASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 335 >gi|15596204|ref|NP_249698.1| hypothetical protein PA1007 [Pseudomonas aeruginosa PAO1] gi|107100448|ref|ZP_01364366.1| hypothetical protein PaerPA_01001473 [Pseudomonas aeruginosa PACS2] gi|116048935|ref|YP_792264.1| hypothetical protein PA14_51300 [Pseudomonas aeruginosa UCBPP-PA14] gi|218893033|ref|YP_002441902.1| hypothetical protein PLES_43181 [Pseudomonas aeruginosa LESB58] gi|254239344|ref|ZP_04932667.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254245280|ref|ZP_04938602.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296390635|ref|ZP_06880110.1| hypothetical protein PaerPAb_20876 [Pseudomonas aeruginosa PAb1] gi|9946917|gb|AAG04396.1|AE004533_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115584156|gb|ABJ10171.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126171275|gb|EAZ56786.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126198658|gb|EAZ62721.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218773261|emb|CAW29073.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 357 Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 121/360 (33%), Gaps = 22/360 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++ + + G APVL+A++I F + + Sbjct: 9 MQRYFSDEEAVVLAIMLVLGFSVILAFGGMLAPVLAAMVIAFLIQGVVGMLERFRVPH-- 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI---PVPRWLSDIPGGM 117 LF V L++ + G+L + +V +L Q +PR L + + Sbjct: 67 ------------LFAVWLVYSLFLGLLALFLVVLLPLLWQQLFTLFNELPRMLGEWQSVL 114 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L + + ET G + + + ++ + ++ + I +F Sbjct: 115 LMLPERYPSLISEEQVLKAIETARGEFGQIGQWALTSSLASLPVVVNVMIYLVLVPILVF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 FF +D K++ + + I + G I + G V A+ Sbjct: 175 FFLKDKKRFHTWFHRYLPRERGL-MKQVWAEMNQQIANYIRGKVIEIVITGAVTYIAFAY 233 Query: 236 AGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVD 293 G+ L ++ + ++P GA + V++ + L + AI + Sbjct: 234 LGLNYAALLALLVGLSVVVPYIGAVVVSVPVAMIAFFQWGWSDQFIYLMVAHAIIQALDG 293 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P L + L + ++ G G+F L L+ + + E Sbjct: 294 NVLVPLLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLVKAVLDAWPKDLPETP 353 >gi|330883109|gb|EGH17258.1| permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 278 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 96/253 (37%), Gaps = 11/253 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +++ + L P L AL++ + P+ T+SV+ +F + Sbjct: 2 ALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLERAGLSR--------TLSVVAVFGLF 53 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKI 135 L L ++ + L ++ + + WL +P L + Sbjct: 54 TLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKAA 113 Query: 136 LSETFLKT-NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +SE + + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 114 ISEHMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLPR 173 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A++ Sbjct: 174 QREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAIV 233 Query: 255 PGGAPISFTAVSI 267 P + ++ Sbjct: 234 PYMGFVIGIGSAL 246 >gi|218440841|ref|YP_002379170.1| hypothetical protein PCC7424_3926 [Cyanothece sp. PCC 7424] gi|218173569|gb|ACK72302.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 340 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 115/334 (34%), Gaps = 14/334 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + I L ++ ++ + +A+++ + F K FLA+I + +++ + Sbjct: 9 IIALLISLYVVWQIRQLVLLIFTAIVLATALNQLVKQFQRWKLRR--FLAIITSFAILLI 66 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + + + + + + L L +L Sbjct: 67 ISIIFALLI------IPPFIEQFQELVELLPTTLTQVEALINLIENRYLDFLELPDFNTL 120 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + F F++ + + + + I F + + L Sbjct: 121 QQEIQPQIARIVRGFFDVFSTSI-----NIIVQAVLVFILTLMFLGNPQAYCSLFIRLFP 175 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +I + + + S +G+ I + ++ G W+ VP +A ++ ++ Sbjct: 176 SFYRRRVGEILSLCEEALSSWTIGIIIEMVFITILSGIGLWILQVPLVLAHAILAGLLNF 235 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P + + + + A + + I I L P ++ + L T Sbjct: 236 IPNLGPTLSVVFPVAIALLDAPWKAGAVLVLYIIIQQIESYWLTPTIMAKQVSLLPAVTL 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + G LGL I + M +IA W E I+ Sbjct: 296 MAQLFFASFFGFLGLLIA-LPMTVIAKTWLEEIL 328 >gi|228911276|ref|ZP_04075081.1| hypothetical protein bthur0013_54150 [Bacillus thuringiensis IBL 200] gi|228968572|ref|ZP_04129558.1| hypothetical protein bthur0004_53450 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791113|gb|EEM38729.1| hypothetical protein bthur0004_53450 [Bacillus thuringiensis serovar sotto str. T04001] gi|228848452|gb|EEM93301.1| hypothetical protein bthur0013_54150 [Bacillus thuringiensis IBL 200] Length = 300 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP G Sbjct: 144 EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFP