RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780223|ref|YP_003064636.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] (360 letters) >d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151 Score = 26.3 bits (58), Expect = 4.6 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 17/77 (22%) Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P V ++ + + I + ++ + I+L +V + Sbjct: 92 IPVVVPYSILFNLARDVGVDWDIDYE-------LQIGL----------TIDLPVVGEFTI 134 Query: 298 PFLVGGPIKLPFLPTFF 314 P G IKLP FF Sbjct: 135 PISSKGEIKLPTFKDFF 151 >d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]} Length = 331 Score = 25.5 bits (55), Expect = 7.4 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ S E + ++R V +++ + +I G + +A++L V V Sbjct: 56 QVAS--ESITDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVVHTDKPIV 113 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLI 271 + +M P A + +++Y + Sbjct: 114 LVG--SMRPSTALSADGPLNLYSAV 136 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.331 0.145 0.454 Gapped Lambda K H 0.267 0.0442 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,369,689 Number of extensions: 63959 Number of successful extensions: 195 Number of sequences better than 10.0: 1 Number of HSP's gapped: 195 Number of HSP's successfully gapped: 20 Length of query: 360 Length of database: 2,407,596 Length adjustment: 86 Effective length of query: 274 Effective length of database: 1,226,816 Effective search space: 336147584 Effective search space used: 336147584 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 53 (24.9 bits)