HHsearch alignment for GI: 254780224 and conserved domain: pfam10098
>pfam10098 DUF2336 Uncharacterized protein conserved in bacteria (DUF2336). Members of this family of hypothetical bacterial proteins have no known function.
Probab=100.00 E-value=0 Score=373.58 Aligned_cols=238 Identities=28% Similarity=0.406 Sum_probs=232.8
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
Q ss_conf 99999973858998999999954999999998629999989999998439899999986089984694679999998178
Q gi|254780224|r 86 VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165 (382)
Q Consensus 86 vA~pvL~~Sp~L~d~dLv~ia~~~~~~~~~AIA~R~~ls~~V~~aLae~gd~~v~~~Ll~N~~A~is~~~l~~lv~ra~~ 165 (382)
T Consensus 1 VA~PvL~~S~~Lsd~DLi~ia~~~~~~h~~AIA~R~~ls~~VtdaLve~gd~~vv~~Ll~N~gA~is~~~~~~lv~ra~~ 80 (263)
T pfam10098 1 VAGPVLERSPVLSDADLIEIARTGGQEHLLAIARRPDLSEAVTDALVERGDREVVRRLLRNPGARFSEAGLERLVERAAD 80 (263)
T ss_pred CCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
T ss_conf 97677724999998999999996899999997778989989999999728889999987299981786789999998765
Q ss_pred CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 989999986246899899999999867999997852158-9989999999988887864320156773469999999986
Q gi|254780224|r 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244 (382)
Q Consensus 166 ~~~l~~~L~~R~dLp~~~~~~L~~~vs~~lr~~l~~r~~-l~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~lv~~L~~ 244 (382)
T Consensus 81 ~~~l~~~L~~R~dLp~~~~~~L~~~vs~~lr~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~v~~l~~ 160 (263)
T pfam10098 81 DAALREALGARPDLPADVRRRLLAKVSEALRAKLLARAAPLSAERIQRAVREAAERAAADLAADSRDFAEAKRLVRHLRA 160 (263)
T ss_pred CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 68899988556469999999999996799999999834556899999999999998750001234325679999999987
Q ss_pred CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5899989999989819947999999998299989999997179917999999962999889999999999998402667
Q gi|254780224|r 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323 (382)
Q Consensus 245 ~g~Lt~~lllral~~G~~~~f~~aLA~lsgi~~~~v~~ll~d~~~~~l~aL~~aaGLp~~~~~af~~A~~~~r~~~~~~ 323 (382)
T Consensus 161 ~g~L~~~~l~r~l~~g~~~~~~~ala~l~gi~~~~v~~il~~~~~~~l~~l~kaaGL~~~~~~~~~~a~~~~~~~~~~~ 239 (263)
T pfam10098 161 RGRLTEALLLRAALSGRLEEFAAALAELSGLPVETVRRLLHDGRGEGLAALCKAAGLSWATFAALLAARDGWRRIAPSD 239 (263)
T ss_pred CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf 5899999999999859978999999988693999999998379956999999985989999999999866322498778