HHsearch results for GI: 254780224 and protein with PDBid: 1lrv_A
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=98.11 E-value=3.9e-07 Score=60.52 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=77.8
Q ss_pred HHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHH
Q ss_conf 99851969899999999821487898899998708977899999973858998999999954999999998629999989
Q gi|254780224|r 47 MHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126 (382)
Q Consensus 47 ~~L~~d~~~~vR~alA~~La~~~~aP~~vi~~LA~D~~~vA~pvL~~Sp~L~d~dLv~ia~~~~~~~~~AIA~R~~ls~~ 126 (382)
..+++||...||...| ..+|.+.+..|..|+++.++-....+ |+...|+.++.+.+..+|.+++.+ ++..
T Consensus 56 ~~~l~~p~~evRa~aA------r~a~~~~L~~Ll~D~d~~VR~~aA~~--L~~~~L~~L~~D~d~~VR~~aa~~--L~~~ 125 (244)
T 1lrv_A 56 VQYLADPFWERRAIAV------RYSPVEALTPLIRDSDEVVRRAVAYR--LPREQLSALMFDEDREVRITVADR--LPLE 125 (244)
T ss_dssp GGGTTCSSHHHHHHHH------TTSCGGGGGGGTTCSSHHHHHHHHTT--SCSGGGGGTTTCSCHHHHHHHHHH--SCTG
T ss_pred HHHCCCCCHHHHHHHH------HHCCHHHHHHHHCCCCHHHHHHHHHH--CCHHHHHHHHCCCCHHHHHHHHHH--CCHH
T ss_conf 9870499799999998------62999999988069798999999997--899999998249898899999982--9999
Q ss_pred HHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 9999984398999999860899
Q gi|254780224|r 127 VVENLIETGCVDNIVALLGNKS 148 (382)
Q Consensus 127 V~~aLae~gd~~v~~~Ll~N~~ 148 (382)
+...+..+.+..|...++.|..
T Consensus 126 ~L~~Ll~D~d~~VR~aaa~~~~ 147 (244)
T 1lrv_A 126 QLEQMAADRDYLVRAYVVQRIP 147 (244)
T ss_dssp GGGGGTTCSSHHHHHHHHHHSC
T ss_pred HHHHHHCCCCHHHHHHHHHCCC
T ss_conf 9998832998898888761267