HHSEARCH alignment of GI: 254780224 and SCOP domain: d1lrva_

Alignment
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=98.26  E-value=1.5e-07  Score=61.58  Aligned_cols=89  Identities=19%  Similarity=0.159  Sum_probs=60.7

Q ss_pred             HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHH
Q ss_conf             98519698999999998214878988999987089778999999738589989999999549999999986299999899
Q gi|254780224|r   48 HLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV  127 (382)
Q Consensus        48 ~L~~d~~~~vR~alA~~La~~~~aP~~vi~~LA~D~~~vA~pvL~~Sp~L~d~dLv~ia~~~~~~~~~AIA~R~~ls~~V  127 (382)
                      .++.||...||...+      .++|..++..|..|+++.++-.....  |+..-|..+..+.+..+|.+++.+  ++..+
T Consensus        49 ~~l~~p~~e~Ra~Aa------~~a~~~~L~~Ll~D~d~~VR~~AA~~--Lp~~~L~~L~~D~d~~VR~~aa~~--l~~~~  118 (233)
T d1lrva_          49 QYLADPFWERRAIAV------RYSPVEALTPLIRDSDEVVRRAVAYR--LPREQLSALMFDEDREVRITVADR--LPLEQ  118 (233)
T ss_dssp             GGTTCSSHHHHHHHH------TTSCGGGGGGGTTCSSHHHHHHHHTT--SCSGGGGGTTTCSCHHHHHHHHHH--SCTGG
T ss_pred             HHHCCCCHHHHHHHH------HCCCHHHHHHHHCCCCHHHHHHHHHH--CCHHHHHHHHCCCCHHHHHHHHHC--CCHHH
T ss_conf             885499699999987------01999999988269898999999997--489999998449974689988742--68899


Q ss_pred             HHHHHHCCCHHHHHHHHHC
Q ss_conf             9999843989999998608
Q gi|254780224|r  128 VENLIETGCVDNIVALLGN  146 (382)
Q Consensus       128 ~~aLae~gd~~v~~~Ll~N  146 (382)
                      ...+..+.+..|....+.|
T Consensus       119 L~~Ll~D~d~~VR~~aa~~  137 (233)
T d1lrva_         119 LEQMAADRDYLVRAYVVQR  137 (233)
T ss_dssp             GGGGTTCSSHHHHHHHHHH
T ss_pred             HHHHHCCCCHHHHHHHHHC
T ss_conf             9998559987899999861


SCOP domain information

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Leucine-rich repeat variant
domain: Leucine-rich repeat variant
species: Azotobacter vinelandii [TaxId: 354]